Citrus Sinensis ID: 028508

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHccHHHcccHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHcccccEEcccccccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MGRRKTVLRSAVAALHSLgipaiglegdvrkrEDAVRVVESTINHFGKLDILVNAAagnflvpaedlspngfrtVIEIDSVGTFIMCHEALKYLKkggrgqassssggiIINISATLHYTATWYQIHVSAAKAAVDSITRSLALewgtdyairvngiapgpikdtagvsklapeEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ
Flexible Loop (DISEMBL)
mgrrktvlRSAVAalhslgipaiglegdvrkREDAVRVVESTINHFGKLDILVNAAAGNFLVpaedlspngFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAirvngiapgpikdtagvsklapeEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ
Low Complexity Region (SEG)
MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKggrgqassssggiiinisATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ
Disordered region (IsUnstruct)
*******LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG*********GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA*****
Disordered Region (DISOPRED)
*GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG*ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV*
Disordered Region (DISEMBL)
********RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL**********SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ
Disordered Region (DISPRO)
*******LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
Q9LTV6	298	Peroxisomal 2,4-dienoyl-C	yes	no	0.990	0.691	0.781	9e-78
Q5RBV3	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.836	0.595	0.418	9e-31
Q9NUI1	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.836	0.595	0.413	1e-30
Q6NV34	300	Peroxisomal 2,4-dienoyl-C	yes	no	0.812	0.563	0.436	1e-30
O34717	254	Probable 2,4-dienoyl-CoA	yes	no	0.947	0.775	0.375	6e-30
P32573	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.812	0.578	0.396	5e-29
Q9WV68	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.836	0.595	0.418	6e-27
Q9Z2M4	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.831	0.592	0.421	3e-26
Q9WYG0	251	Uncharacterized oxidoredu	yes	no	0.879	0.729	0.323	6e-20
P39483	261	Glucose 1-dehydrogenase 2	no	no	0.870	0.693	0.329	2e-19

>sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1

 Score =  289 bits (740), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 161/206 (78%), Positives = 176/206 (85%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL  AV+AL SLGI AIGLEGDVRK+EDA RVVE+T  HFGKLDILVNAAAGNF
Sbjct: 42  MGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           L  AEDLSPNGFRTV++ID+VGTF MCH ALKYLKKG  G+ SSS GG IINISATLHYT
Sbjct: 102 LAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K 
Sbjct: 162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKT 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            +YM  YK GEKWDIAMAALYL+ D+
Sbjct: 222 REYMPLYKVGEKWDIAMAALYLSCDS 247

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 4

>sp|Q5RBV3|DECR2_PONAB Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abelii GN=DECR2 PE=2 SV=1

 Score =  133 bits (334), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 105/184 (57%), Gaps = 10/184 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR     V  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ 
Sbjct: 80  CLPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +     +   +          GG+I+NI+ATL       Q+H  +AKAAVD++TR 
Sbjct: 140 GTFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           LA+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + L
Sbjct: 192 LAVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL 250

Query: 201 YLAS 204
           YLAS
Sbjct: 251 YLAS 254

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9NUI1|DECR2_HUMAN Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapiens GN=DECR2 PE=1 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 105/184 (57%), Gaps = 10/184 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ 
Sbjct: 80  CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +     +   +          GG+I+NI+ATL       Q+H  +AKAAVD++TR 
Sbjct: 140 GTFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           LA+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + L
Sbjct: 192 LAVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL 250

Query: 201 YLAS 204
           YLAS
Sbjct: 251 YLAS 254

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q6NV34|DECR2_DANRE Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1

 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/181 (43%), Positives = 106/181 (58%), Gaps = 12/181 (6%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DVR+ E  +  V+ T+  FG++DIL+N AAGNFL PA  LS N F+TV+EID++GTF   
Sbjct: 93  DVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMGTFNTS 152

Query: 88  HEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
                K+ K           GG I+NISATL Y     Q+H  +AKAA D++TR LA+EW
Sbjct: 153 KVIYDKWFK---------DHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHLAVEW 203

Query: 147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATDYMAAYKFGEKWDIAMAALYLASD 205
           G    +RVN +APGPI  T G  +L      +  A   +   + G K ++A A L+LAS 
Sbjct: 204 GPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLFLASR 262

Query: 206 A 206
           A
Sbjct: 263 A 263

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|O34717|FADH_BACSU Probable 2,4-dienoyl-CoA reductase OS=Bacillus subtilis (strain 168) GN=fadH PE=2 SV=1

 Score =  130 bits (327), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 111/205 (54%), Gaps = 8/205 (3%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L      + +        + DVR    A  +++  +  FG+LD L+N AAGNF+
Sbjct: 34  GRNHEALEETKKEIQTFEGQVACFQMDVRSDSAASDMIKEAVKAFGRLDALINNAAGNFI 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            PAE L+PNG++ VIEI   GTF  C +A        R        G+I+N++AT  + A
Sbjct: 94  CPAEKLTPNGWKAVIEIVLNGTFF-CSQA------AARHWIDQKQQGVILNMAATYAWGA 146

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
               +H +AAKA V S+TR+LA+EWG+ Y IR N IAPGPI+ T G  KL   E+  ++ 
Sbjct: 147 GAGVVHSAAAKAGVLSLTRTLAVEWGSKYGIRTNAIAPGPIERTGGAEKLFESEKAMART 206

Query: 181 TDYMAAYKFGEKWDIAMAALYLASD 205
            + +   + G   +IA  A +L SD
Sbjct: 207 MNSVPLGRLGTPEEIAALAAFLLSD 231

Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|P32573|SPS19_YEAST Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPS19 PE=1 SV=4

 Score =  127 bits (319), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 104/179 (58%), Gaps = 10/179 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DVR  E     V+ T+  FGK+D ++  AAGNF+    +LSPN F++V++ID +G+F   
Sbjct: 85  DVRNFEQVENAVKKTVEKFGKIDFVIAGAAGNFVCDFANLSPNAFKSVVDIDLLGSFNTA 144

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
              LK LKK         S G I+ +SAT HY    +Q HV AAKA +D++ ++LA+E G
Sbjct: 145 KACLKELKK---------SKGSILFVSATFHYYGVPFQGHVGAAKAGIDALAKNLAVELG 195

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
               IR N IAPG I +T G+ +LA ++ + KA   +   + G   DIA + +Y+ S A
Sbjct: 196 P-LGIRSNCIAPGAIDNTEGLKRLAGKKYKEKALAKIPLQRLGSTRDIAESTVYIFSPA 253

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Dispensable for growth and sporulation on solid acetate and oleate media, but is essential for these processes to occur on petroselineate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9WV68|DECR2_MOUSE Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus musculus GN=Decr2 PE=1 SV=1

 Score =  120 bits (301), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 106/184 (57%), Gaps = 10/184 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR   + +  V+  +  FGK++IL+N AAGNFL PA  LS N F+TV++ID++
Sbjct: 80  CLPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTI 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +     K   +          GG+I+NI+ATL       Q+H  AAKAAVD++TR 
Sbjct: 140 GTFNVSSVLYKKFFR--------DHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAAL 200
           LA+EWG    IRVN +APG I  T G+ +L      SK   +     + G K +IA + L
Sbjct: 192 LAVEWGPQ-NIRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVL 250

Query: 201 YLAS 204
           YLAS
Sbjct: 251 YLAS 254

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9Z2M4|DECR2_RAT Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1

 Score =  118 bits (296), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 109/185 (58%), Gaps = 12/185 (6%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR     +  V+  +  FGK+DIL+N AAGNFL PA  LS N F+TV++ID++
Sbjct: 80  CLPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTL 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +     +   +          GG+I+NI+ATL       Q+H  AAKAAVD++TR 
Sbjct: 140 GTFNVSRVLYEKFFR--------DHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--YKFGEKWDIAMAA 199
           LA+EWG    IRVN +APG I  T G+ +L   +  SK   Y+++   + G K +IA + 
Sbjct: 192 LAVEWGPQ-NIRVNSLAPGAISGTEGLRRLGGPKASSK-FKYLSSPIPRLGTKTEIAHSV 249

Query: 200 LYLAS 204
           LYLAS
Sbjct: 250 LYLAS 254

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9WYG0|Y325_THEMA Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_0325 PE=3 SV=1

 Score = 97.4 bits (241), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 21/204 (10%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---AE 65
           +  V  + S+G  A  + GDV K  DA ++V+ T+  FG+LDILVN A    +VP    E
Sbjct: 43  KETVELIKSMGGEAAFIFGDVAK--DAEQIVKKTVETFGRLDILVNNAG---IVPYGNIE 97

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           + S   F   + ++  G F++   A++ +KK G        GG+I+N+S+         +
Sbjct: 98  ETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQG--------GGVIVNVSSEAGLIGIPRR 149

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKAT 181
              S +KAA+  +TRSLA+++  DY IRVN + PG  +    ++++     PEE+  K T
Sbjct: 150 CVYSVSKAALLGLTRSLAVDY-VDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMT 208

Query: 182 DYMAAYKFGEKWDIAMAALYLASD 205
             +   + G++ +IA A L+ A D
Sbjct: 209 SRIPMKRLGKEEEIAFAILFAACD 232

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P39483|DHG2_BACME Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 10/191 (5%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           +   G  AI + GDV K ED V +VE+ +  FG LD+++N A     VP+ +LS   +  
Sbjct: 52  IEEAGGQAIIVRGDVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPVPSHELSLENWNQ 111

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKA 133
           VI+ +  G F+   EA+KY          +   G +IN+S ++H    W   +H +A+K 
Sbjct: 112 VIDTNLTGAFLGSREAIKYF-------VENDIKGNVINMS-SVHEMIPWPLFVHYAASKG 163

Query: 134 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 193
            +  +T +LALE+     IRVN I PG I       K A  E R+     +     G+  
Sbjct: 164 GMKLMTETLALEYAPK-GIRVNNIGPGAIDTPINAEKFADPEQRADVESMIPMGYIGKPE 222

Query: 194 DIAMAALYLAS 204
           +IA  A +LAS
Sbjct: 223 EIASVAAFLAS 233

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
225423652	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.985	0.690	0.820	1e-93
255565323	298	2,4-dienoyl-CoA reductase, putative [Ric	0.990	0.691	0.810	3e-93
224120278	299	predicted protein [Populus trichocarpa]	0.990	0.688	0.810	1e-91
225462240	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.985	0.690	0.805	6e-90
358249176	298	uncharacterized protein LOC100800885 [Gl	0.990	0.691	0.815	2e-88
388502636	297	unknown [Lotus japonicus]	0.985	0.690	0.786	6e-88
388519645	275	unknown [Lotus japonicus]	0.985	0.745	0.786	8e-88
358248016	298	uncharacterized protein LOC100793630 [Gl	0.990	0.691	0.805	5e-86
449444144	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.985	0.690	0.781	6e-86
115460520	299	Os04g0614000 [Oryza sativa Japonica Grou	0.985	0.685	0.733	9e-83

>gi|225423652|ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|147772171|emb|CAN73418.1| hypothetical protein VITISV_019955 [Vitis vinifera] gi|297737992|emb|CBI27193.3| unnamed protein product [Vitis vinifera]

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 169/206 (82%), Positives = 189/206 (91%), Gaps = 1/206 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRR+ VL +AV++LHSLGIPAIGLEGDVRK+EDAVRV+ESTI HFG+LDILVNAAAGNF
Sbjct: 42  MGRRRQVLDAAVSSLHSLGIPAIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LVPAEDLSP GF+TVI+IDSVGTF MCHEAL+YLKKGG G+ S S+GGIIINISATLHYT
Sbjct: 102 LVPAEDLSPKGFQTVIDIDSVGTFTMCHEALQYLKKGGPGK-SPSTGGIIINISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           ATWYQIHVSAAKAAVDSITRSLALEWGTDY IRVNGIAPGPI DTAG+SKLAPE++  KA
Sbjct: 161 ATWYQIHVSAAKAAVDSITRSLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKA 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            ++   +K GEKWDIAMAA+YLAS+A
Sbjct: 221 KEHEPLFKLGEKWDIAMAAVYLASNA 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565323|ref|XP_002523653.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223537105|gb|EEF38739.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 167/206 (81%), Positives = 186/206 (90%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAVA+LHSLGIPAIGLEGDVRK++DAV+++EST+ HFG+LDILVNAAAGNF
Sbjct: 42  MGRRKNVLLSAVASLHSLGIPAIGLEGDVRKKDDAVKILESTVRHFGRLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV +EDLSPNGFRTVI+IDSVGTF MCHEA KYLKKGG+G+  S+ GGIIINISATLHYT
Sbjct: 102 LVASEDLSPNGFRTVIDIDSVGTFTMCHEAFKYLKKGGQGKDPSTGGGIIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           ATWYQIHVSAAKAAVDSITRSLALEWGT+Y I+VNGIAPGPI DTAG+SKLAPEEI  +A
Sbjct: 162 ATWYQIHVSAAKAAVDSITRSLALEWGTEYDIKVNGIAPGPIGDTAGLSKLAPEEILREA 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            + +   K GEKWDIAMAALYL SDA
Sbjct: 222 KEKLPLDKLGEKWDIAMAALYLTSDA 247

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120278|ref|XP_002318290.1| predicted protein [Populus trichocarpa] gi|222858963|gb|EEE96510.1| predicted protein [Populus trichocarpa]

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/206 (81%), Positives = 184/206 (89%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK V+ SAV++L+SLGIPAIG EGDVRKREDA+RVVEST  HFG+LDILVNAAAGNF
Sbjct: 43  MGRRKHVVDSAVSSLNSLGIPAIGFEGDVRKREDAIRVVESTFKHFGRLDILVNAAAGNF 102

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LVP+EDLS NGFRTV++IDSVGTF MCHEALKYLKKGG G+  S++GG IINISATLHYT
Sbjct: 103 LVPSEDLSSNGFRTVMDIDSVGTFTMCHEALKYLKKGGLGKDPSTAGGTIINISATLHYT 162

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           ATWYQIHVSAAKAAVDSITR+LALEWGTDY IRVNGIAPGPI DTAG+SKL  E I SKA
Sbjct: 163 ATWYQIHVSAAKAAVDSITRNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLGLEGILSKA 222

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            + M  +K GEKWDIAMAA+YLASDA
Sbjct: 223 MEKMPLFKVGEKWDIAMAAVYLASDA 248

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462240|ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|297736138|emb|CBI24176.3| unnamed protein product [Vitis vinifera]

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 166/206 (80%), Positives = 181/206 (87%), Gaps = 1/206 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAV+ L S GIPA+G  GDVRK+EDA RVVEST+ HFG+LDILVNAAAGNF
Sbjct: 42  MGRRKQVLDSAVSGLCSQGIPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV +EDLSPNGFRTV++IDSVGTF MCHEALKYLKKGG G+ S SSGG I+NISATLHYT
Sbjct: 102 LVSSEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGR-SFSSGGSILNISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI DTAG+SKLAPEEI +KA
Sbjct: 161 AAWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKA 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            + M  YK GEKWDIAMAALYLASDA
Sbjct: 221 REIMPLYKLGEKWDIAMAALYLASDA 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249176|ref|NP_001240261.1| uncharacterized protein LOC100800885 [Glycine max] gi|255644975|gb|ACU22987.1| unknown [Glycine max]

 Score =  330 bits (846), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 168/206 (81%), Positives = 185/206 (89%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL+SAV+ L SL IPA+G EGDVRK+EDAVRVVEST  HFG++DILVNAAAGNF
Sbjct: 42  MGRRKQVLQSAVSVLQSLAIPAVGFEGDVRKQEDAVRVVESTFKHFGRIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLSPNGFRTV++IDSVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYT
Sbjct: 102 LVSAEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI DT G+SKLAP+EI SKA
Sbjct: 162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKA 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            DYM  YK GEKWDIAMAAL+L SDA
Sbjct: 222 RDYMPLYKLGEKWDIAMAALFLVSDA 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502636|gb|AFK39384.1| unknown [Lotus japonicus]

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 162/206 (78%), Positives = 177/206 (85%), Gaps = 1/206 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAV+ L SL IPAIG  GDVRK+EDA RVVEST  HFGK+DILVNAAAGNF
Sbjct: 42  MGRRKQVLDSAVSVLQSLSIPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLSPNGFRTV++IDSVGTF MC EALKYLKKGG G+ SS +G  IINISATLHYT
Sbjct: 102 LVSAEDLSPNGFRTVLDIDSVGTFTMCSEALKYLKKGGLGRGSSGAGA-IINISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI +K+
Sbjct: 161 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKS 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            DYM  YK GEKWDIAMAAL+L SDA
Sbjct: 221 KDYMPLYKEGEKWDIAMAALFLVSDA 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519645|gb|AFK47884.1| unknown [Lotus japonicus]

 Score =  328 bits (841), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 162/206 (78%), Positives = 177/206 (85%), Gaps = 1/206 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAV+ L SL IPAIG  GDVRK+EDA RVVEST  HFGK+DILVNAAAGNF
Sbjct: 42  MGRRKQVLDSAVSVLQSLSIPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLSPNGFRTV++IDSVGTF MC EALKYLKKGG G+ SS +G  IINISATLHYT
Sbjct: 102 LVSAEDLSPNGFRTVLDIDSVGTFTMCSEALKYLKKGGLGRGSSGAGA-IINISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI +K+
Sbjct: 161 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKS 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            DYM  YK GEKWDIAMAAL+L SDA
Sbjct: 221 KDYMPLYKGGEKWDIAMAALFLVSDA 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248016|ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max] gi|255647355|gb|ACU24144.1| unknown [Glycine max]

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 166/206 (80%), Positives = 183/206 (88%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL+SAV+ L SL IPA+G EGDVRK+EDA RVVEST  HFG++DILVNAAAGNF
Sbjct: 42  MGRRKQVLQSAVSVLQSLVIPAVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLS NGFRTV++IDSVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYT
Sbjct: 102 LVSAEDLSSNGFRTVLDIDSVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI SKA
Sbjct: 162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKA 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            DYM  YK GEKWDIAMAAL+LASDA
Sbjct: 222 RDYMPLYKLGEKWDIAMAALFLASDA 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444144|ref|XP_004139835.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Cucumis sativus]

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 161/206 (78%), Positives = 176/206 (85%), Gaps = 1/206 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAVAAL SLGI A G EGDVRK+EDA  VV+ST N  G LDILVNAAAGNF
Sbjct: 42  MGRRKQVLDSAVAALRSLGISAFGFEGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLSPNGFRTV++IDSVGTF MCH+ALKYLKKGG G+ +S +GG IINISATLHYT
Sbjct: 102 LVSAEDLSPNGFRTVMDIDSVGTFTMCHQALKYLKKGGPGR-NSLTGGTIINISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A WYQIHVSAAKAAVD+ITR+LALEWG D+ IRVNGIAPGPI+ T G+SKLAPEEI SK 
Sbjct: 161 AAWYQIHVSAAKAAVDAITRNLALEWGADHDIRVNGIAPGPIQGTPGLSKLAPEEINSKI 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            + M  Y+ GEKWDIAMAALYLASDA
Sbjct: 221 REDMPLYRIGEKWDIAMAALYLASDA 246

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115460520|ref|NP_001053860.1| Os04g0614000 [Oryza sativa Japonica Group] gi|38347363|emb|CAE05217.2| OSJNBa0070C17.24 [Oryza sativa Japonica Group] gi|113565431|dbj|BAF15774.1| Os04g0614000 [Oryza sativa Japonica Group] gi|116309871|emb|CAH66908.1| OSIGBa0126B18.1 [Oryza sativa Indica Group] gi|125549710|gb|EAY95532.1| hypothetical protein OsI_17378 [Oryza sativa Indica Group]

 Score =  311 bits (797), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 151/206 (73%), Positives = 172/206 (83%), Gaps = 1/206 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRR+ VL  AVAAL S G+ A+G EGDVRK+EDA RVV +T+ HFGKLDILVN AAGNF
Sbjct: 44  MGRRREVLDKAVAALRSHGLRAVGFEGDVRKQEDAARVVAATVQHFGKLDILVNGAAGNF 103

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           L   EDL+P GFRTV++ID+VGT+ MC+EALKYLKKGG G+  S+ GG+IINISATLHYT
Sbjct: 104 LASPEDLTPKGFRTVVDIDTVGTYTMCYEALKYLKKGGPGKGPST-GGVIINISATLHYT 162

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A WYQIHVSAAKA VDSITRSLALEWGTDY IRVNGIAPGPI+ T G+ KLAPEE+   +
Sbjct: 163 AAWYQIHVSAAKAGVDSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMRKLAPEEMAKGS 222

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            + M  +K GEKWDIAMAALYLASDA
Sbjct: 223 REIMPLFKLGEKWDIAMAALYLASDA 248

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2087770	298	SDRB "short-chain dehydrogenas	0.990	0.691	0.723	2.5e-74
TAIR|locus:3437247	156	AT2G07640 [Arabidopsis thalian	0.581	0.775	0.644	1.7e-36
UNIPROTKB|F1NG68	308	LOC100858408 "Uncharacterized	0.927	0.626	0.393	2.4e-28
TIGR_CMR|BA_4204	254	BA_4204 "oxidoreductase, short	0.937	0.767	0.391	1.7e-27
UNIPROTKB|F1PEZ3	266	DECR2 "Uncharacterized protein	0.903	0.706	0.395	1.2e-26
MGI|MGI:1347059	292	Decr2 "2-4-dienoyl-Coenzyme A	0.899	0.640	0.39	1.5e-26
UNIPROTKB|Q5RBV3	292	DECR2 "Peroxisomal 2,4-dienoyl	0.908	0.647	0.391	6.6e-26
RGD|71002	292	Decr2 "2,4-dienoyl CoA reducta	0.903	0.643	0.39	6.6e-26
ZFIN|ZDB-GENE-040426-2612	300	decr2 "2,4-dienoyl CoA reducta	0.817	0.566	0.394	8.4e-26
UNIPROTKB|Q9NUI1	292	DECR2 "Peroxisomal 2,4-dienoyl	0.908	0.647	0.386	1.1e-25

TAIR|locus:2087770 SDRB "short-chain dehydrogenase-reductase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 149/206 (72%), Positives = 163/206 (79%)

Query:     1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
             MGRRK VL  AV+AL SLGI AIGLEGDVRK+EDA RVVE+T  HFGKLDILVNAAAGNF
Sbjct:    42 MGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNF 101

Query:    61 LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT 120
             L  AEDLSPNGFRTV++ID+VGTF MCH ALKYLKK                  ATLHYT
Sbjct:   102 LAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYT 161

Query:   121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
             A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K 
Sbjct:   162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKT 221

Query:   181 TDYMAAYKFGEKWDIAMAALYLASDA 206
              +YM  YK GEKWDIAMAALYL+ D+
Sbjct:   222 REYMPLYKVGEKWDIAMAALYLSCDS 247

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

TAIR|locus:3437247 AT2G07640 [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 78/121 (64%), Positives = 86/121 (71%)

Query:    86 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
             MCH ALKYLKK                  ATLHYTA+ YQIHVSAAK AVD+ TR+LALE
Sbjct:     1 MCHAALKYLKKVAPGRDSSSGGGSIINISATLHYTASRYQIHVSAAKVAVDATTRNLALE 60

Query:   146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
             WGTDY IRVNGIA GPI  T G+SKL PEEI +K  +YM  YK GEKWDIAMAALYL+ D
Sbjct:    61 WGTDYDIRVNGIATGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAALYLSCD 120

Query:   206 A 206
             +
Sbjct:   121 S 121

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NG68 LOC100858408 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 81/206 (39%), Positives = 117/206 (56%)

Query:     2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
             GR ++ V++++   + + G   + L  DVR+ +  V  V+ T+  F ++DILVN AAGNF
Sbjct:    73 GRNQQRVVQASKKLVVATGQQCLPLSIDVRQPQTIVAAVDETLKQFKQIDILVNGAAGNF 132

Query:    61 LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHY 119
             L PA  LS N F+TV++ID++GTF        KY +                   ATL Y
Sbjct:   133 LCPASALSFNAFKTVMDIDTLGTFNTSKVLFEKYFRDHGGVIINIT---------ATLSY 183

Query:   120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-S 178
                  Q+H  +AKAA+D++TR LA+EWG +  IRVN +APGPI  T G  +L  +  + S
Sbjct:   184 RGQALQVHAGSAKAAIDAMTRHLAVEWGPNN-IRVNSLAPGPITGTEGFRRLGGKFAKDS 242

Query:   179 KATDYMAAYKFGEKWDIAMAALYLAS 204
             K  D +   + G K +IA +ALYLAS
Sbjct:   243 KQFDTIPLQRAGNKTEIAHSALYLAS 268

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

TIGR_CMR|BA_4204 BA_4204 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 81/207 (39%), Positives = 112/207 (54%)

Query:     2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
             GR K  L  A   +       + ++ DVR  +D  +++E     FG++DIL+N AAGNF+
Sbjct:    34 GRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFI 93

Query:    62 VPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KY-LKKXXXXXXXXXXXXXXXXXXATLHY 119
              PAEDLS NG+ +VI I   GTF  C +A+ KY ++K                  AT  +
Sbjct:    94 CPAEDLSVNGWNSVINIVLNGTFY-CSQAIGKYWIEKGIKGNIINMV--------ATYAW 144

Query:   120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRS 178
              A    IH +AAKA V ++T++LA+EWG  Y IRVN IAPGPI+ T G  KL   EE+  
Sbjct:   145 DAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAK 204

Query:   179 KATDYMAAYKFGEKWDIAMAALYLASD 205
             +    +   + G   +IA  A YL SD
Sbjct:   205 RTIQSVPLGRLGTPEEIAGLAYYLCSD 231

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|F1PEZ3 DECR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 79/200 (39%), Positives = 106/200 (53%)

Query:     7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
             V ++A     + G   + L  DVR        V+  +  FGK+DILVN AAGNFL PA  
Sbjct:    40 VSKAARKLAAATGQRCLPLSLDVRAFPAITAAVDQALKEFGKIDILVNCAAGNFLCPASA 99

Query:    67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI 126
             LS N F+TV++IDS+GTF M    + Y K                   ATL       Q+
Sbjct:   100 LSFNAFKTVMDIDSLGTFNMSR--VLYEK------FFRDHGGVIVNITATLGTRGQVLQV 151

Query:   127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYM 184
             H  +AKAAVD++TR LA+EWG    IR+N +APGPI  T G  +L   +  + +K  D +
Sbjct:   152 HAGSAKAAVDAMTRHLAVEWGPQN-IRINSLAPGPISGTEGFRRLGGHQASVSTKVLD-I 209

Query:   185 AAYKFGEKWDIAMAALYLAS 204
                + G K ++A  ALYLAS
Sbjct:   210 PLQRLGNKTEVAHGALYLAS 229

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1347059 Decr2 "2-4-dienoyl-Coenzyme A reductase 2, peroxisomal" [Mus musculus (taxid:10090)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 78/200 (39%), Positives = 106/200 (53%)

Query:     6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE 65
             T  +  VAA     +P   L  DVR   + +  V+  +  FGK++IL+N AAGNFL PA 
Sbjct:    67 TAAKKLVAATGKRCLP---LSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPAS 123

Query:    66 DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ 125
              LS N F+TV++ID++GTF +   ++ Y K                   ATL       Q
Sbjct:   124 ALSFNAFKTVVDIDTIGTFNV--SSVLYKK------FFRDHGGVIVNITATLSMRGQVLQ 175

Query:   126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
             +H  AAKAAVD++TR LA+EWG    IRVN +APG I  T G+ +L      SK   +  
Sbjct:   176 LHAGAAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSN 234

Query:   186 AY-KFGEKWDIAMAALYLAS 204
                + G K +IA + LYLAS
Sbjct:   235 PIPRLGTKTEIAHSVLYLAS 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=ISO

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=ISO;ISS

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO

UNIPROTKB|Q5RBV3 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Pongo abelii (taxid:9601)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 78/199 (39%), Positives = 104/199 (52%)

Query:     7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
             VL +A     + G   + L  DVR     V  V+  +  FG++DIL+N AAGNFL PA  
Sbjct:    65 VLTAARKLAGATGRRCLPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGA 124

Query:    67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI 126
             LS N F+TV++ID+ GTF +    + Y K                   ATL       Q+
Sbjct:   125 LSFNAFKTVMDIDTSGTFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQV 176

Query:   127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMA 185
             H  +AKAAVD++TR LA+EWG    IRVN +APGPI  T G+ +L  P+   S       
Sbjct:   177 HAGSAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP 235

Query:   186 AYKFGEKWDIAMAALYLAS 204
               + G K +IA + LYLAS
Sbjct:   236 LQRLGNKTEIAHSVLYLAS 254

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISS

RGD|71002 Decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Rattus norvegicus (taxid:10116)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 78/200 (39%), Positives = 108/200 (54%)

Query:     7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
             V  +A   + + G   + L  DVR     +  V+  +  FGK+DIL+N AAGNFL PA  
Sbjct:    65 VSEAAKKLVAATGKRCLPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASA 124

Query:    67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI 126
             LS N F+TV++ID++GTF +    + Y K                   ATL       Q+
Sbjct:   125 LSFNAFKTVVDIDTLGTFNVSR--VLYEK------FFRDHGGVIVNITATLSMRGQVLQL 176

Query:   127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             H  AAKAAVD++TR LA+EWG    IRVN +APG I  T G+ +L   +  SK   Y+++
Sbjct:   177 HAGAAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGAISGTEGLRRLGGPKASSKFK-YLSS 234

Query:   187 Y--KFGEKWDIAMAALYLAS 204
                + G K +IA + LYLAS
Sbjct:   235 PIPRLGTKTEIAHSVLYLAS 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0006183 "GTP biosynthetic process" evidence=IEA

GO:0006228 "UTP biosynthetic process" evidence=IEA

GO:0006241 "CTP biosynthetic process" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA;ISO

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA;ISO

ZFIN|ZDB-GENE-040426-2612 decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Danio rerio (taxid:7955)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 71/180 (39%), Positives = 97/180 (53%)

Query:    28 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
             DVR+ E  +  V+ T+  FG++DIL+N AAGNFL PA  LS N F+TV+EID++GTF   
Sbjct:    93 DVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMGTF--- 149

Query:    88 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
                     K                  ATL Y     Q+H  +AKAA D++TR LA+EWG
Sbjct:   150 -----NTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHLAVEWG 204

Query:   148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKWDIAMAALYLASDA 206
                 +RVN +APGPI  T G  +L      +    + +   + G K ++A A L+LAS A
Sbjct:   205 PS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLFLASRA 263

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

UNIPROTKB|Q9NUI1 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Homo sapiens (taxid:9606)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 77/199 (38%), Positives = 104/199 (52%)

Query:     7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
             VL +A     + G   + L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  
Sbjct:    65 VLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGA 124

Query:    67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI 126
             LS N F+TV++ID+ GTF +    + Y K                   ATL       Q+
Sbjct:   125 LSFNAFKTVMDIDTSGTFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQV 176

Query:   127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMA 185
             H  +AKAAVD++TR LA+EWG    IRVN +APGPI  T G+ +L  P+   S       
Sbjct:   177 HAGSAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP 235

Query:   186 AYKFGEKWDIAMAALYLAS 204
               + G K +IA + LYLAS
Sbjct:   236 LQRLGNKTEIAHSVLYLAS 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LTV6	DECR2_ARATH	1, ., 3, ., 1, ., 3, 4	0.7815	0.9903	0.6912	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1.34	0.946
3rd Layer	1.3.1	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-81
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-57
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	5e-51
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-40
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-34
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-34
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	8e-34
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-33
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-30
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-29
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	7e-29
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	7e-29
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-28
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-28
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-27
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	5e-27
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-27
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	9e-27
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-26
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-24
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-24
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-23
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	4e-23
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	6e-23
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	7e-23
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	8e-23
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-22
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	6e-22
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	9e-22
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	9e-22
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-21
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-21
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-21
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-21
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-20
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-20
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-20
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-20
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	6e-20
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-20
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-19
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-19
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-19
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-19
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-19
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-19
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-19
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-19
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-19
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-18
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-18
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-18
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-18
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-18
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	4e-18
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-18
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-18
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-17
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-17
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-17
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-17
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	3e-17
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-17
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-17
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	5e-17
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-16
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-16
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-16
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-16
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-16
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	5e-16
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	7e-16
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	7e-16
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-15
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-15
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	4e-15
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-15
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	5e-15
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	7e-15
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-14
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-14
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	3e-14
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-14
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-14
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	4e-14
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	6e-14
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	7e-14
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	8e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	9e-14
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-13
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-13
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-13
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-13
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-13
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-13
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-12
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-12
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	2e-12
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-12
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-12
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-12
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	3e-12
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-12
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	4e-12
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	5e-12
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	5e-12
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-12
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	7e-12
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	9e-12
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	3e-11
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-11
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-11
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	4e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	4e-11
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-11
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	5e-11
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-11
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	5e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-11
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-11
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-10
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-10
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-10
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-10
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-10
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-10
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-10
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-10
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-10
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	3e-10
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-10
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	6e-10
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	7e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	8e-10
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-09
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-09
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-09
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-09
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-09
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-09
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-09
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	4e-09
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	5e-09
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-08
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-08
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-08
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	4e-08
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-08
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	4e-08
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-08
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	5e-08
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	6e-08
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	6e-08
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	8e-08
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	9e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-07
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-07
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	2e-07
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-07
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-07
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	3e-07
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	4e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	4e-07
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	4e-07
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	4e-07
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-07
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	7e-07
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	9e-07
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	9e-07
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-06
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-06
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-06
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-06
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	2e-06
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-06
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-06
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	3e-06
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	3e-06
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	6e-06
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	6e-06
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-05
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-05
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-05
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-05
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	5e-05
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-05
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	9e-05
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-04
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-04
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	5e-04
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	6e-04
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-04
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	0.002
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	0.002
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.002
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	0.002
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	0.002
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	0.002
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	0.003
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	0.003
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	0.003
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	0.003
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	0.004
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  243 bits (622), Expect = 1e-81
 Identities = 98/208 (47%), Positives = 125/208 (60%), Gaps = 10/208 (4%)

Query: 1   MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            GR+  VL +A   + S  G  A  ++ DVR  E     V+ T+  FGK+DIL+N AAGN
Sbjct: 33  AGRKPEVLEAAAEEISSATGGRAHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGN 92

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           FL PAE LSPNGF+TVI+ID  GTF       K L +          GG I+NISAT  Y
Sbjct: 93  FLAPAESLSPNGFKTVIDIDLNGTFNTTKAVGKRLIEAKH-------GGSILNISATYAY 145

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRS 178
           T + +Q+H +AAKA VD++TRSLA+EWG  Y IRVN IAPGPI  T G+ +LAP      
Sbjct: 146 TGSPFQVHSAAAKAGVDALTRSLAVEWG-PYGIRVNAIAPGPIPTTEGMERLAPSGKSEK 204

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
           K  + +   + G   +IA  AL+L SDA
Sbjct: 205 KMIERVPLGRLGTPEEIANLALFLLSDA 232

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  181 bits (461), Expect = 3e-57
 Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 11/206 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  + +AVA L   G   +G+  DVR             + FG +D+LV+ AAGNF 
Sbjct: 40  SRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFP 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            PA  +S NGF+TV++ID +GTF +   A   L++          G  II ISA   +  
Sbjct: 100 APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR---------PGASIIQISAPQAFVP 150

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKA 180
              Q HV AAKA VD +TR+LALEWG +  IRVN I PGPI  T G+++LAP  E+++  
Sbjct: 151 MPMQAHVCAAKAGVDMLTRTLALEWGPE-GIRVNSIVPGPIAGTEGMARLAPSPELQAAV 209

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
              +   + G K DIA AAL+LASD 
Sbjct: 210 AQSVPLKRNGTKQDIANAALFLASDM 235

Length = 264

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  164 bits (418), Expect = 5e-51
 Identities = 85/206 (41%), Positives = 114/206 (55%), Gaps = 10/206 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR K  L  A   +       + ++ DVR  ED  ++VE     FG++D L+N AAGNF+
Sbjct: 32  GRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFI 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYT 120
            PAEDLS NG+ +VI+I   GTF       KY ++KG +G         IIN+ AT  + 
Sbjct: 92  CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGN--------IINMVATYAWD 143

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSK 179
           A    IH +AAKA V ++TR+LA+EWG  Y IRVN IAPGPI+ T G  KL   EE   +
Sbjct: 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKR 203

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASD 205
               +   + G   +IA  A +L SD
Sbjct: 204 TIQSVPLGRLGTPEEIAGLAYFLLSD 229

Length = 252

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  137 bits (347), Expect = 2e-40
 Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 10/196 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            +AA+ +LG  A+ ++ DV   ED   +VE  +  FG+LDILVN A      P E+L+  
Sbjct: 37  ELAAIEALGGNAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDE 96

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  V++++  G F++   AL ++KK G        GG I+NIS+         Q   +A
Sbjct: 97  DWDRVLDVNLTGVFLLTRAALPHMKKQG--------GGRIVNISSVAGLRPLPGQAAYAA 148

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KAA++ +TRSLALE    Y IRVN +APG + DT  ++KL PEE   +    +   + G
Sbjct: 149 SKAALEGLTRSLALELA-PYGIRVNAVAPGLV-DTPMLAKLGPEEAEKELAAAIPLGRLG 206

Query: 191 EKWDIAMAALYLASDA 206
              ++A A ++LASD 
Sbjct: 207 TPEEVAEAVVFLASDE 222

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  121 bits (306), Expect = 3e-34
 Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 11/196 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            VA + +LG  A+ ++GDV   E   R V+     FG +DILVN A          +   
Sbjct: 46  LVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEE 105

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  VI+ +  G F +     + + K           G IINIS+ +       Q + +A
Sbjct: 106 DWDRVIDTNLTGVFNLTKAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAA 157

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KA V   T+SLA E  +   I VN +APG I +T     L PE+++      +   + G
Sbjct: 158 SKAGVIGFTKSLARELAS-RGITVNAVAPGFI-ETDMTDAL-PEDVKEAILAQIPLGRLG 214

Query: 191 EKWDIAMAALYLASDA 206
           +  +IA A  +LASD 
Sbjct: 215 QPEEIASAVAFLASDE 230

Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  120 bits (304), Expect = 7e-34
 Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 11/205 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +    +  A L + G  A  L  DV        ++E+ +  FG LDILVN A     
Sbjct: 36  DSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRD 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +S   +  VI+++  GTF +   AL  + K   G+        I+NIS+    T 
Sbjct: 96  ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGR--------IVNISSVSGVTG 147

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + SAAKA V   T++LALE  +   I VN +APG I DT     L PEE++++  
Sbjct: 148 NPGQTNYSAAKAGVIGFTKALALELAS-RGITVNAVAPGFI-DTDMTEGL-PEEVKAEIL 204

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
             +   + G+  ++A A  +LASDA
Sbjct: 205 KEIPLGRLGQPEEVANAVAFLASDA 229

Length = 246

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  120 bits (304), Expect = 8e-34
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  + ++G  AI ++ DV K ED V + +S I  FG LDILVN A       + +++   
Sbjct: 45  VEEIKAVGGKAIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLED 104

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  VI+++  G F+   EA+K  +K       S   G IIN+S+          ++ +A+
Sbjct: 105 WNKVIDVNLTGQFLCAREAIKRFRK-------SKIKGKIINMSSVHEKIPWPGHVNYAAS 157

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K  V  +T++LA E+     IRVN IAPG I            E R+     +   + GE
Sbjct: 158 KGGVKMMTKTLAQEYA-PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGE 216

Query: 192 KWDIAMAALYLASDA 206
             +IA AA +LASD 
Sbjct: 217 PEEIAAAAAWLASDE 231

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  118 bits (299), Expect = 4e-33
 Identities = 71/210 (33%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R+   L  A A L +LGI A+ +  DV    D  R+ E T+  FG +DILVN A   +  
Sbjct: 44  RKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGA 103

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATL--H 118
           PAED     +  V+ ++  G F++     K               G IIN++  A L  +
Sbjct: 104 PAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-------YGRIINVASVAGLGGN 156

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG--PIKDTAGVSKLAPEEI 176
                  I  + +K AV + TR+LA EWG  + IRVN IAPG  P K T G  +   E++
Sbjct: 157 PPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVNAIAPGFFPTKMTRGTLERLGEDL 215

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            +         + G+  D+  AAL LASDA
Sbjct: 216 LAHT----PLGRLGDDEDLKGAALLLASDA 241

Length = 259

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  111 bits (278), Expect = 4e-30
 Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 17/192 (8%)

Query: 19  GIPAIGLEGDVRKREDAVR-VVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVI 76
           G  A  +  DV   E++V  +V +    FG++DILV NA       P E+L+   +  VI
Sbjct: 56  GGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVI 115

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 136
           +++ +G F++   AL  +KK             I+NIS+         Q   +A+KAA+ 
Sbjct: 116 DVNLLGAFLLTRAALPLMKKQ-----------RIVNISSVAGLGGPPGQAAYAASKAALI 164

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWD 194
            +T++LALE      IRVN +APG I DT   + L  A  E   +    +   + G   +
Sbjct: 165 GLTKALALELA-PRGIRVNAVAPGYI-DTPMTAALESAELEALKRLAARIPLGRLGTPEE 222

Query: 195 IAMAALYLASDA 206
           +A A  +LASD 
Sbjct: 223 VAAAVAFLASDE 234

Length = 251

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  108 bits (273), Expect = 3e-29
 Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 11/207 (5%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           +        +    + + G  A   + DVR R      V + +  FG+LDILV  A    
Sbjct: 36  VDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHY 119
           L P  ++    +  VI+++  GTF++   AL  L + G        GG I+   S     
Sbjct: 96  LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG--------GGRIVLTSSVAGPR 147

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                  H +A+KA +   TR+LALE      I VN + PG + DT     L   +    
Sbjct: 148 VGYPGLAHYAASKAGLVGFTRALALELAA-RNITVNSVHPGGV-DTPMAGNLGDAQWAEA 205

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
               +   + GE  DIA A L+LASD 
Sbjct: 206 IAAAIPLGRLGEPEDIAAAVLFLASDE 232

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  107 bits (270), Expect = 7e-29
 Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 17/207 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AG 58
            R +      V  + +LG  A  LE DV  RE    +VE     FG +DILVN A     
Sbjct: 31  DRSEEAAAETVEEIKALGGNAAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGITRD 90

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
           N L+    +S   +  VI ++  G F +    ++ + K   G+        IINIS+ + 
Sbjct: 91  NLLM---RMSEEDWDAVINVNLTGVFNVTQAVIRAMIKRRSGR--------IINISSVVG 139

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 Q + +A+KA V   T+SLA E  +   I VN +APG I DT     L PE+++ 
Sbjct: 140 LIGNPGQANYAASKAGVIGFTKSLAKELAS-RGITVNAVAPGFI-DTDMTDAL-PEKVKE 196

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASD 205
           K    +   + G   ++A A  +LASD
Sbjct: 197 KILKQIPLGRLGTPEEVANAVAFLASD 223

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  107 bits (270), Expect = 7e-29
 Identities = 67/210 (31%), Positives = 97/210 (46%), Gaps = 21/210 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AG 58
              +      V  L + G+ A+G+  DV  RED   VVE      G +DILVN A     
Sbjct: 30  RSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRD 89

Query: 59  NFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
           N L+    ED     +  VI+ +  G F +    L+ + K   G+        IINIS+ 
Sbjct: 90  NLLMRMKEED-----WDAVIDTNLTGVFNLTQAVLRIMIKQRSGR--------IINISSV 136

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
           +       Q + +A+KA V   T+SLA E  +   I VN +APG I DT    KL  E++
Sbjct: 137 VGLMGNAGQANYAASKAGVIGFTKSLAKELAS-RNITVNAVAPGFI-DTDMTDKL-SEKV 193

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           + K    +   +FG   ++A A  +LASD 
Sbjct: 194 KKKILSQIPLGRFGTPEEVANAVAFLASDE 223

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  106 bits (266), Expect = 3e-28
 Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 20/203 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSP 69
            VAA    G  AI +  DV    D    V + +  FG +DILVN A       P  D+  
Sbjct: 44  RVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDE 103

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTA--TWYQ 125
             F  +  ++    ++    A+  ++  G        GG I+N+++T  L       WY 
Sbjct: 104 AEFDRIFAVNVKSPYLWTQAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWY- 154

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDY 183
              +A+K AV ++T++LA E G D  IRVN +AP  ++             E R+K    
Sbjct: 155 ---NASKGAVITLTKALAAELGPD-KIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT 210

Query: 184 MAAYKFGEKWDIAMAALYLASDA 206
           +   + G   DIA AAL+LASD 
Sbjct: 211 IPLGRLGTPEDIANAALFLASDE 233

Length = 251

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (263), Expect = 8e-28
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 11/195 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           +  +   G  AI ++ DV   ED   +VE  +  FGK+DILVN A  +      D++   
Sbjct: 47  LEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEE 106

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  VI+++  G  ++   AL Y+ K           G+I+NIS+         ++  SA+
Sbjct: 107 WDRVIDVNLTGVMLLTRYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSAS 158

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K AV++ T++LA E      IRVN +APG I DT   S  + E+    A +     + G+
Sbjct: 159 KGAVNAFTKALAKELAP-SGIRVNAVAPGAI-DTEMWSSFSEEDKEGLAEEIPLG-RLGK 215

Query: 192 KWDIAMAALYLASDA 206
             +IA   L+LASD 
Sbjct: 216 PEEIAKVVLFLASDD 230

Length = 247

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (261), Expect = 1e-27
 Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 11/199 (5%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
               V A+ +LG  A  ++ DV  +      V + +  FG++DILVN A      P  D+
Sbjct: 44  AEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADM 103

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           S + +  VI+++  G F +    +  ++K          GG I+NIS+         + +
Sbjct: 104 SDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSN 155

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +AAKA +  +T++LA E   +Y I VN +APG I DT        E   +K        
Sbjct: 156 YAAAKAGLVGLTKALARELA-EYGITVNMVAPGDI-DTDMKEATIEEAREAK-DAETPLG 212

Query: 188 KFGEKWDIAMAALYLASDA 206
           + G   DIA A  +L SDA
Sbjct: 213 RSGTPEDIARAVAFLCSDA 231

Length = 249

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  102 bits (257), Expect = 5e-27
 Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +     A   +   G+ A     DV   E     VE+    FGK+DILVN A     
Sbjct: 36  SRNEEKAEEAQQLIEKEGVEATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRR 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            PAE+     +R VI+++  G F +     +++ K G G+        IINI + L    
Sbjct: 96  HPAEEFPEAEWRDVIDVNLNGVFFVSQAVARHMIKQGHGK--------IINICSLLSELG 147

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSK 179
                  +A+K  V  +T++LA EW   + I+VN IAPG    + T  V  +A  E    
Sbjct: 148 GPPVPAYAASKGGVAGLTKALATEWA-RHGIQVNAIAPGYFATEMTEAV--VADPEFNDD 204

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
               + A ++G+  D+  AA++LASDA
Sbjct: 205 ILKRIPAGRWGQPEDLVGAAVFLASDA 231

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 7e-27
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 10/198 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
                 +   G  AI ++GDV    D V ++++ +  FG LD+++N A     VP+ ++S
Sbjct: 46  NDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMS 105

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIH 127
              +  VI  +  G F+   EA+KY  +           G IIN+S ++H    W   +H
Sbjct: 106 LEDWNKVINTNLTGAFLGSREAIKYFVEHDI-------KGNIINMS-SVHEQIPWPLFVH 157

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  V  +T +LA+E+     IRVN I PG I       K A  + R+     +   
Sbjct: 158 YAASKGGVKLMTETLAMEYAPK-GIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMG 216

Query: 188 KFGEKWDIAMAALYLASD 205
             G+  +IA  A +LAS 
Sbjct: 217 YIGKPEEIAAVAAWLASS 234

Length = 261

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  102 bits (256), Expect = 9e-27
 Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 13/182 (7%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV  +E   +  +     FGK+DIL+  A      PA D +   +  VI+++  G F   
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCA 125

Query: 88  HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
             A K  KK G+G    ++S  G I+N            Q   +A+KAAV  + +SLA+E
Sbjct: 126 QAAAKIFKKQGKGSLIITASMSGTIVNRPQP--------QAAYNASKAAVIHLAKSLAVE 177

Query: 146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           W   Y IRVN I+PG I     ++    +E+R K   Y+   +     ++  A LYLASD
Sbjct: 178 W-AKYFIRVNSISPGYID--TDLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASD 234

Query: 206 AV 207
           A 
Sbjct: 235 AS 236

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  101 bits (254), Expect = 1e-26
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 13/197 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
            A +  LG  A+ +  DV + +D   +  +    FG+LD+LV+ AA     P  +L+P  
Sbjct: 40  AAEIEELGGKAVVVRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAH 99

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVS 129
           +   +  +         +A K +++ G        GG I+ IS+   +     +  +   
Sbjct: 100 WDAKMNTNLKALVHCAQQAAKLMRERG--------GGRIVAISSLGSIRALPNYLAV--G 149

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
            AKAA++++ R LA+E G    IRVN ++PG I   A       E++   A     A + 
Sbjct: 150 TAKAALEALVRYLAVELG-PRGIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRV 208

Query: 190 GEKWDIAMAALYLASDA 206
           G   D+A A  +L SDA
Sbjct: 209 GTPQDVADAVGFLCSDA 225

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 96.2 bits (240), Expect = 1e-24
 Identities = 65/205 (31%), Positives = 90/205 (43%), Gaps = 12/205 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              K      VA + + G  AI ++ DV       R+ ++    FG +DILVN A     
Sbjct: 35  ASSKAAAEEVVAEIEAAGGKAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLK 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  + S   F  +  +++ G F +  EA K L+ GGR          IINIS++L    
Sbjct: 95  KPIAETSEEEFDRMFTVNTKGAFFVLQEAAKRLRDGGR----------IINISSSLTAAY 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           T      + +KAAV++ TR LA E G    I VN +APGP+ DT        EE      
Sbjct: 145 TPNYGAYAGSKAAVEAFTRVLAKELG-GRGITVNAVAPGPV-DTDMFYAGKTEEAVEGYA 202

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
                 + GE  DIA    +LAS  
Sbjct: 203 KMSPLGRLGEPEDIAPVVAFLASPD 227

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 4e-24
 Identities = 63/202 (31%), Positives = 88/202 (43%), Gaps = 16/202 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            R   AAL + G  A  +  D+       R  ++     G LD LVN A       A +L
Sbjct: 44  ARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATEL 103

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
             + +  V+ ++  GTF+M   AL +L+  GRG+        I+N+++    TA W    
Sbjct: 104 DIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGR--------IVNLASD---TALWGAPK 152

Query: 128 V---SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           +    A+K AV  +TRSLA E G    I VN IAPG     A     A E          
Sbjct: 153 LGAYVASKGAVIGMTRSLARELGGR-GITVNAIAPGLTATEATAYVPADERHAYYL-KGR 210

Query: 185 AAYKFGEKWDIAMAALYLASDA 206
           A  +     D+A A L+L SDA
Sbjct: 211 ALERLQVPDDVAGAVLFLLSDA 232

Length = 250

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.1 bits (234), Expect = 1e-23
 Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 29/190 (15%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV  R+   +  E     FG++D+LVN A   +L+P E+     +  +I+I+  G     
Sbjct: 59  DVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSL 142
           +E L  LK         S  G I+NI++     T     T+Y I     KA +  +TR L
Sbjct: 119 YEFLPLLKL--------SKNGAIVNIASNAGIGTAAEGTTFYAI----TKAGIIILTRRL 166

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-------RSKATDYMAAYKFGEKWDI 195
           A E G  Y IRVN +APG ++    +S  + EE        R+K          G+  DI
Sbjct: 167 AFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKT----TGKPEDI 221

Query: 196 AMAALYLASD 205
           A   L+LASD
Sbjct: 222 ANIVLFLASD 231

Length = 255

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 92.6 bits (230), Expect = 4e-23
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 19/201 (9%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAE 65
             V  +  LG  A     D+   ++   + +  ++  GK+DILVN A G     F +P  
Sbjct: 50  HVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMA 109

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           D     FR   E++    F +       ++K G        GG+I+ I++          
Sbjct: 110 D-----FRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINM 156

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              +++KAA   + R++A + G    IRVNGIAPG I   A  S + P EI  K   +  
Sbjct: 157 TSYASSKAAASHLVRNMAFDLGEK-NIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTP 214

Query: 186 AYKFGEKWDIAMAALYLASDA 206
             + G+  DIA AAL+L S A
Sbjct: 215 IRRLGQPQDIANAALFLCSPA 235

Length = 255

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 92.4 bits (229), Expect = 6e-23
 Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 5   KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA 64
           K    + V  L   G     ++ DV K EDA R+VE  +NHFGK+DILVN A        
Sbjct: 41  KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTF 100

Query: 65  EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 124
           + L+   +  VI+++    F      L Y+        + +  G II+IS+ +     + 
Sbjct: 101 KKLNREDWERVIDVNLSSVFNTTSAVLPYI--------TEAEEGRIISISSIIGQAGGFG 152

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q + SAAKA +   T+SLALE      + VN I PG I DT  V+++ PEE+R K    +
Sbjct: 153 QTNYSAAKAGMLGFTKSLALELAKT-NVTVNAICPGFI-DTEMVAEV-PEEVRQKIVAKI 209

Query: 185 AAYKFGEKWDIAMAALYLASD 205
              +FG+  +IA   +YL  D
Sbjct: 210 PKKRFGQADEIAKGVVYLCRD 230

Length = 247

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 91.9 bits (228), Expect = 7e-23
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 11/199 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE-DL 67
            +  AA+   G  AIGLE +V   +D   VV++T++ FG + ILVN A G    P +  +
Sbjct: 37  EAVAAAIQQAGGQAIGLECNVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPM 96

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   F    +++    F +      +++K G        GG I+NIS+            
Sbjct: 97  TEEDFEWAFKLNLFSAFRLSQLCAPHMQKAG--------GGAILNISSMSSENKNVRIAA 148

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
             ++KAAV+ +TR+LA + G    IRVN +APG +K  A  S L P EI      +    
Sbjct: 149 YGSSKAAVNHMTRNLAFDLGPK-GIRVNAVAPGAVKTDALASVLTP-EIERAMLKHTPLG 206

Query: 188 KFGEKWDIAMAALYLASDA 206
           + GE  DIA AAL+L S A
Sbjct: 207 RLGEPEDIANAALFLCSPA 225

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 92.0 bits (229), Expect = 8e-23
 Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 10/185 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A GL  DV   +     V + I+ FG++DILVN+A    L PAED+S   +   I+I+  
Sbjct: 63  AKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLK 122

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G+F+M     +++   G        GG I+N+++     A    +   A+KA V  +T+ 
Sbjct: 123 GSFLMAQAVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKV 174

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 201
           LALEWG  Y I VN I+P  +  T    K    E   +A   + A +F    +IA AAL+
Sbjct: 175 LALEWG-PYGITVNAISP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALF 232

Query: 202 LASDA 206
           LASDA
Sbjct: 233 LASDA 237

Length = 255

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 91.4 bits (227), Expect = 1e-22
 Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 24/212 (11%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R    L      + + G  AI +  DV  + D    V  T    G L + VNAA      
Sbjct: 41  RTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANAN 100

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ----ASSSSGGIIINISATLH 118
           PAE++    ++TV++I+  G F+ C    + + + G G     AS S  GII+N      
Sbjct: 101 PAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMS--GIIVNRGLL-- 156

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPE 174
                 Q H +A+KA V  +++SLA+EW     IRVN I+PG    P+     +      
Sbjct: 157 ------QAHYNASKAGVIHLSKSLAMEW-VGRGIRVNSISPGYTATPMNTRPEMVHQTKL 209

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                    MA        ++   A++L SDA
Sbjct: 210 FEEQTPMQRMAKVD-----EMVGPAVFLLSDA 236

Length = 254

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 89.4 bits (222), Expect = 6e-22
 Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 22/193 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS 80
           AI ++ DV KR D   +VE+ ++ FG+LDILVN A       P  ++    F  V  ++ 
Sbjct: 53  AIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNV 112

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----TWYQIHVSAAKAAVD 136
              ++     + ++++ G        GG+IINI++T         TWY    +A+K  V 
Sbjct: 113 KSIYLSAQALVPHMEEQG--------GGVIINIASTAGLRPRPGLTWY----NASKGWVV 160

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKW 193
           + T+++A+E      IRVN + P    +T  +S    E   E R+K    +   +     
Sbjct: 161 TATKAMAVELAPR-NIRVNCLCP-VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPD 218

Query: 194 DIAMAALYLASDA 206
           DIA AALYLASD 
Sbjct: 219 DIANAALYLASDE 231

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 89.7 bits (223), Expect = 9e-22
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 12/151 (7%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNG 71
             +   G   + + GD+        +V+  +  FGKLDILVN AA      + ED++   
Sbjct: 70  KLIEEEGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQ 129

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
                  +    F +   AL +LKKG            IIN ++   Y  + + +  +A 
Sbjct: 130 LEKTFRTNIFSMFYLTKAALPHLKKGSS----------IINTTSVTAYKGSPHLLDYAAT 179

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162
           K A+ + TR L+L+   +  IRVN +APGPI
Sbjct: 180 KGAIVAFTRGLSLQLA-EKGIRVNAVAPGPI 209

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 89.0 bits (221), Expect = 9e-22
 Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 19/207 (9%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R++ L++ V+    L + A     D+ + E   R++ +T+  FG+LDILVN A       
Sbjct: 44  RQSCLQAGVSEKKILLVVA-----DLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGG 98

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            ED     +  V+ ++      +   A+ +L K         + G I+N+S+     +  
Sbjct: 99  GEDQDIEEYDKVMNLNLRAVIYLTKLAVPHLIK---------TKGEIVNVSSVAGGRSFP 149

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSK 179
             ++   +KAA+D  TR  ALE      +RVN ++PG          G+ +    +  S+
Sbjct: 150 GVLYYCISKAALDQFTRCTALELAP-KGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSR 208

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
           A +     + G   ++A A  +LASDA
Sbjct: 209 AKETHPLGRPGTVDEVAEAIAFLASDA 235

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 89.6 bits (223), Expect = 1e-21
 Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 24/175 (13%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN- 59
           + R +    + VA + + G  A+ ++ DV  +E   +  +  +  FG  DIL+N A GN 
Sbjct: 40  LDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNH 99

Query: 60  ---------FLVPAE-----DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSS 105
                      +        DL   GF  V +++ +GT +      K +           
Sbjct: 100 PKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK------- 152

Query: 106 SGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
            GG IINIS+   +T        SAAKAA+ + T+ LA+ +     IRVN IAPG
Sbjct: 153 -GGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKV-GIRVNAIAPG 205

Length = 278

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 88.2 bits (219), Expect = 2e-21
 Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 10/195 (5%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
           AA   LG  A     DV   +    VV++    FG+LD+LVN A        E  +   +
Sbjct: 44  AAAAELGDAARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEW 103

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
           R +++I+  G F+     +  +K+ G        GG IIN+S+             +A+K
Sbjct: 104 RRLLDINLTGVFLGTRAVIPPMKEAG--------GGSIINMSSIEGLVGDPALAAYNASK 155

Query: 133 AAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
            AV  +T+S ALE  T  Y IRVN + PG I  T    +L   +            + GE
Sbjct: 156 GAVRGLTKSAALECATQGYGIRVNSVHPGYIY-TPMTDELLIAQGEMGNYPNTPMGRAGE 214

Query: 192 KWDIAMAALYLASDA 206
             +IA A +YLASD 
Sbjct: 215 PDEIAYAVVYLASDE 229

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 88.6 bits (220), Expect = 2e-21
 Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 18/198 (9%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIE 77
           G        DV       RV ++ +  FG LD+LVN A         ++++P  +   + 
Sbjct: 57  GAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLA 116

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           ++  G F     A+  LK  G        GG+II +S+         +   +A+K AV  
Sbjct: 117 VNLNGQFYFARAAVPLLKASGH-------GGVIIALSSVAGRLGYPGRTPYAASKWAVVG 169

Query: 138 ITRSLALEWGTDYAIRVNGIAPG---------PIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           + +SLA+E G    IRVN I PG          I+  A    +  +E+  +  + ++  +
Sbjct: 170 LVKSLAIELG-PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGR 228

Query: 189 FGEKWDIAMAALYLASDA 206
             E  DIA  AL+LAS A
Sbjct: 229 MVEPEDIAATALFLASPA 246

Length = 264

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 87.9 bits (218), Expect = 2e-21
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 10/195 (5%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
             + +LG   + L  D+   E    +V+S +  FG +DILVN A       AE+ S   +
Sbjct: 45  QQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDW 104

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
             V+ ++    F +   A K+  K GR       GG IINI++ L +         +A+K
Sbjct: 105 DDVMNVNLKSVFFLTQAAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPSYTASK 157

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGE 191
            AV  +T+ LA EW     I VN IAPG +  T     L  +E R+ A  + + A ++G 
Sbjct: 158 HAVAGLTKLLANEWAA-KGINVNAIAPGYM-ATNNTQALRADEDRNAAILERIPAGRWGT 215

Query: 192 KWDIAMAALYLASDA 206
             DI   A++LAS A
Sbjct: 216 PDDIGGPAVFLASSA 230

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 86.0 bits (213), Expect = 1e-20
 Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 16/202 (7%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV------P 63
           SA A     G  AI ++ DVR R+    ++E   NHFG +D +VN A  +F         
Sbjct: 37  SAEAVAAEAGERAIAIQADVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKT 96

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            + +    ++  +E    G   +    L   K+ G G+        +INI   L      
Sbjct: 97  FDTIDWEDYQQQLEGAVKGALNLLQAVLPDFKERGSGR--------VINIGTNLFQNPVV 148

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
                + AKAA+   TR++A E G  Y I VN ++ G +K T   S   P+E+       
Sbjct: 149 PYHDYTTAKAALLGFTRNMAKELG-PYGITVNMVSGGLLKVT-DASAATPKEVFDAIAQT 206

Query: 184 MAAYKFGEKWDIAMAALYLASD 205
               K     DIA A L+ AS 
Sbjct: 207 TPLGKVTTPQDIADAVLFFASP 228

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 86.0 bits (213), Expect = 2e-20
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 13/200 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            VAA  + G  A   +GDV   E    +V+     +G+LD+LVN A              
Sbjct: 44  RVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEA 103

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  V+ ++  G F+    A+  +++ G        GG I+N ++ L       +    A
Sbjct: 104 DWDAVMRVNVGGVFLWAKYAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVA 155

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVSKLA-PEEIRSKATDYMAA 186
           +K A+ S+TR++AL+  TD  IRVN +APG I         ++ A PE +R         
Sbjct: 156 SKGAIASLTRAMALDHATD-GIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM 214

Query: 187 YKFGEKWDIAMAALYLASDA 206
            +FG   ++A AAL+LASD 
Sbjct: 215 NRFGTAEEVAQAALFLASDE 234

Length = 252

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 85.7 bits (212), Expect = 2e-20
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 16/205 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L      + +LG   +  + DVR   +   VVE  +  FG+LD++V  A       + +L
Sbjct: 53  LDETARLVEALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWEL 112

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           S   + TV++I+  G +  C   + ++ + G       +GG II  S+     A     H
Sbjct: 113 SEEQWDTVLDINLTGVWRTCKAVVPHMIERG-------NGGSIIITSSVAGLKALPGLAH 165

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +AAK  +  +T++LA E   +Y IRVN I P  + DT  ++  A  E   K  +   A+
Sbjct: 166 YAAAKHGLVGLTKTLANELA-EYGIRVNSIHPYSV-DTPMIAPEAMREAFLKYPEAARAF 223

Query: 188 K-------FGEKWDIAMAALYLASD 205
                   F    D+A A L+LASD
Sbjct: 224 MPALPVSGFVPPEDVADAVLWLASD 248

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 84.6 bits (210), Expect = 4e-20
 Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 18/164 (10%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R    L S    L+        LE DV   E     V+  I  FG++D+LVN A      
Sbjct: 32  RNPDKLESLGELLND---NLEVLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFG 88

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E+ S    R + E++  G   +    L  ++K           G I+N+S+      T
Sbjct: 89  PLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRK--------QGSGRIVNVSSVAGLVPT 140

Query: 123 WYQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK 163
            +     A+KAA+++++ SL LE   +G    I+V  I PGP++
Sbjct: 141 PFLGPYCASKAALEALSESLRLELAPFG----IKVTIIEPGPVR 180

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 86.8 bits (215), Expect = 6e-20
 Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 21/198 (10%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRT 74
           SLG     L  DV          E     FG++D+LVN A      +    D +   F  
Sbjct: 48  SLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFAR 107

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
           +  I+  G +++  EAL+ + + G G A       I+N+++     A   +   SA+KAA
Sbjct: 108 LQAINLTGAYLVAREALRLMIEQGHGAA-------IVNVASGAGLVALPKRTAYSASKAA 160

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------K 188
           V S+TRSLA EW     IRVN + PG ++     +++  E  R+   D  A        +
Sbjct: 161 VISLTRSLACEWAAK-GIRVNAVLPGYVR-----TQMVAELERAGKLDPSAVRSRIPLGR 214

Query: 189 FGEKWDIAMAALYLASDA 206
            G   +IA A  +LASD 
Sbjct: 215 LGRPEEIAEAVFFLASDQ 232

Length = 520

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 6e-20
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 23/207 (11%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
             +AA   LGI A G   DV   +    +V       G +DILVN A     +P  ++S 
Sbjct: 49  KGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSA 108

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQ 125
             FR VI+ID    FI+    +  + K G G+        IINI + +      T + Y 
Sbjct: 109 EDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGK--------IINICSMMSELGRETVSAY- 159

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDY 183
              +AAK  +  +T+++A E+G +  I+ NGI PG I    TA + +L  +  R     +
Sbjct: 160 ---AAAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQF 215

Query: 184 M----AAYKFGEKWDIAMAALYLASDA 206
           +     A ++G+  D+A  A++LASDA
Sbjct: 216 IIAKTPAARWGDPEDLAGPAVFLASDA 242

Length = 265

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 83.5 bits (207), Expect = 1e-19
 Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 8   LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---P 63
           L      L +L     I LE D+  +E    ++ES +  FG++DIL+N A  +  V    
Sbjct: 39  LEQLKEELTNLYKNRVIALELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSR 98

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL------ 117
            E+     +  V+ ++  G F+     +K  KK           G IINI++        
Sbjct: 99  FEEFPYEQWNEVLNVNLGGAFLCSQAFIKLFKK--------QGKGSIINIASIYGVIAPD 150

Query: 118 --HYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 173
              Y  T     +  S  KA +  +T+ LA  +  D  IRVN I+PG I +        P
Sbjct: 151 FRIYENTQMYSPVEYSVIKAGIIHLTKYLAKYYA-DTGIRVNAISPGGILNN------QP 203

Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            E   K T      +     D+  A ++L SDA
Sbjct: 204 SEFLEKYTKKCPLKRMLNPEDLRGAIIFLLSDA 236

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 83.4 bits (207), Expect = 1e-19
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 29/189 (15%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DVR  +    +V++ +   G+LD+LVN A G+    A + SP     ++E++ +   ++ 
Sbjct: 55  DVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVA 114

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSI 138
             A   +++          GG I+NI +         T  Y          AAKA + ++
Sbjct: 115 QAANAVMQQ-------QPGGGSIVNIGSVSGRRPSPGTAAY---------GAAKAGLLNL 158

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           TRSLA+EW     +RVN +  G ++ + + +     E I + A   +   +     DIA 
Sbjct: 159 TRSLAVEWAPK--VRVNAVVVGLVRTEQSELHYGDAEGIAAVA-ATVPLGRLATPADIAW 215

Query: 198 AALYLASDA 206
           A L+LASD 
Sbjct: 216 ACLFLASDL 224

Length = 252

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 83.3 bits (206), Expect = 1e-19
 Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 14  ALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGF 72
                G    G   DV  R +   ++++  +HF GKL+ILVN A  N    A+D +   +
Sbjct: 49  EWREKGFKVEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDY 108

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
             ++  +    + +   A   LK  G G         I+ IS+     A        A K
Sbjct: 109 SLIMSTNFEAAYHLSRLAHPLLKASGNGN--------IVFISSVAGVIAVPSGAPYGATK 160

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 192
            A++ +TRSLA EW  D  IRVN +AP  I        +  +E   K  +     +FGE 
Sbjct: 161 GALNQLTRSLACEWAKD-NIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEP 219

Query: 193 WDIAMAALYLASDA 206
            ++A    +L   A
Sbjct: 220 EEVAALVAFLCMPA 233

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 83.7 bits (207), Expect = 1e-19
 Identities = 65/226 (28%), Positives = 95/226 (42%), Gaps = 32/226 (14%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN- 59
           +GR +         + +LG  AI L  DV  R    R  E  +  FG +DIL+N A GN 
Sbjct: 35  LGRNQEKGDKVAKEITALGGRAIALAADVLDRASLERAREEIVAQFGTVDILINGAGGNH 94

Query: 60  --------FLVPAE-----DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                      P       DL   G+  V +++  G+F+      K + +          
Sbjct: 95  PDATTDPEHYEPETEQNFFDLDEEGWEFVFDLNLNGSFLPSQVFGKDMLEQK-------- 146

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           GG IINIS+   ++        SAAKAAV + T+ LA+E+ T   +RVN IAPG      
Sbjct: 147 GGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAVEFATT-GVRVNAIAPGFFVTPQ 205

Query: 167 GVSKLAPEEIRSKATDYMAAY-------KFGEKWDIAMAALYLASD 205
               L   +     TD            +FG+  ++  A L+LAS+
Sbjct: 206 NRKLLINPD--GSYTDRSNKILGRTPMGRFGKPEELLGALLFLASE 249

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 83.4 bits (206), Expect = 2e-19
 Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 15/184 (8%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DV K ED   ++  T+  FG++D LVN A  +      ++ S   FR ++ ++ +  F+ 
Sbjct: 67  DVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLA 126

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
              AL +L+K         S G IIN+S+ +            A K A+ ++T++LA++ 
Sbjct: 127 SKYALPHLRK---------SQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVD- 176

Query: 147 GTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 202
            + Y +RVN I+PG    P+ +              +        + G + +  +AAL+L
Sbjct: 177 ESRYGVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFL 236

Query: 203 ASDA 206
           A++A
Sbjct: 237 AAEA 240

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 82.8 bits (205), Expect = 2e-19
 Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 11/205 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +         + +LG  A+ ++ +V   E    +       FG+LD+ VN AA   L 
Sbjct: 37  RSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLR 96

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           PA +L  + +   + I++        EA K ++K G        GG II++S+       
Sbjct: 97  PAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG--------GGKIISLSSLGSIRYL 148

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKAT 181
                V  +KAA++++TR LA+E      I VN ++ G + DT  +      EE+   A 
Sbjct: 149 ENYTTVGVSKAALEALTRYLAVELAP-KGIAVNAVSGGAV-DTDALKHFPNREELLEDAR 206

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
               A +  E  D+A A L+L S  
Sbjct: 207 AKTPAGRMVEPEDVANAVLFLCSPE 231

Length = 250

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 82.5 bits (204), Expect = 3e-19
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 12/195 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
            A + + G  A+GL  DVR        +++ +  FG+LDILVN A         +LS   
Sbjct: 51  AAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEE 110

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  VI+++  G F +   AL  + +  R       GG I+NI++         Q++ +A+
Sbjct: 111 WDDVIDVNLDGFFNVTQAALPPMIRARR-------GGRIVNIASVAGVRGNRGQVNYAAS 163

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA +  +T++LA E      I VN +APG I +T      AP E      + +   + GE
Sbjct: 164 KAGLIGLTKTLANELA-PRGITVNAVAPGAI-NTPMADNAAPTE---HLLNPVPVQRLGE 218

Query: 192 KWDIAMAALYLASDA 206
             ++A    +L SDA
Sbjct: 219 PDEVAALVAFLVSDA 233

Length = 249

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 3e-19
 Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 37/215 (17%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
            A  A   +G  AI +  DV +++   R+V + +  FG +DIL N AA   + P  D+S 
Sbjct: 42  RARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISR 101

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA---------TLHYT 120
           + +  +  ++  G F +     +++ + GR       GG IIN+++           HY 
Sbjct: 102 DSYDRLFAVNVKGLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYC 154

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT----------AGVSK 170
           AT         KAAV S T+S AL     + I VN IAPG + DT          A    
Sbjct: 155 AT---------KAAVISYTQSAALAL-IRHGINVNAIAPGVV-DTPMWDQVDALFARYEN 203

Query: 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
             P E +    + +   + G   D+   AL+LAS 
Sbjct: 204 RPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASA 238

Length = 257

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 82.8 bits (205), Expect = 4e-19
 Identities = 58/191 (30%), Positives = 82/191 (42%), Gaps = 17/191 (8%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTV 75
           G+  + + GDV         VE T+   G+LDILVN AA  F  P    ED++       
Sbjct: 95  GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAA--FQYPQQSLEDITAEQLDKT 152

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
            + +    F M   AL +LK           G  IIN  +   Y      I  SA K A+
Sbjct: 153 FKTNIYSYFHMTKAALPHLK----------QGSAIINTGSITGYEGNETLIDYSATKGAI 202

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
            + TRSLA        IRVN +APGPI      S    E++    ++     + G+  ++
Sbjct: 203 HAFTRSLAQSLVQK-GIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN-TPMQRPGQPEEL 260

Query: 196 AMAALYLASDA 206
           A A ++LAS  
Sbjct: 261 APAYVFLASPD 271

Length = 290

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 80.9 bits (200), Expect = 1e-18
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 11/183 (6%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           ++ D+ K E A +VV+  +  FGK+DILVN A      P  +     +  V++I+    +
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVY 127

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +     K + K G G+        IINI++ L +    +    +A+K  V  +T++ A 
Sbjct: 128 HLSQAVAKVMAKQGSGK--------IINIASMLSFQGGKFVPAYTASKHGVAGLTKAFAN 179

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLA 203
           E    Y I+VN IAPG IK TA  + +  ++ R+      + A ++GE  D+  AA++LA
Sbjct: 180 ELA-AYNIQVNAIAPGYIK-TANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLA 237

Query: 204 SDA 206
           S A
Sbjct: 238 SRA 240

Length = 258

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 80.5 bits (199), Expect = 2e-18
 Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 17/207 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            +S +  +   G  A+ +  DV  ++D   +++  +  FG  D++VN A    + P   +
Sbjct: 40  AKSTIQEISEAGYNAVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTI 99

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +    + V  ++  G       A +  KK G        GG IIN S+            
Sbjct: 100 TEEDLKKVYAVNVFGVLFGIQAAARQFKKLGH-------GGKIINASSIAGVQGFPNLGA 152

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT------AGVSKLA--PEEIRSK 179
            SA+K AV  +T++ A E      I VN  APG +K          V ++A  PE     
Sbjct: 153 YSASKFAVRGLTQTAAQELA-PKGITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFA 211

Query: 180 ATDYMAAYK-FGEKWDIAMAALYLASD 205
                       E  D+A    +LAS+
Sbjct: 212 EFSSSIPLGRLSEPEDVAGLVSFLASE 238

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 80.1 bits (198), Expect = 2e-18
 Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV        ++++ +   G+LD+LVN A      P  D++ + +  V+++   GTF   
Sbjct: 77  DVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRAT 136

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             AL+Y++   RG      GG+I+N ++ L + A   Q H +AAKA V ++TR  ALE  
Sbjct: 137 RAALRYMR--ARGH-----GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALE-A 188

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
            +Y +R+N +AP  I     ++K+   E+  +     A  +  E W++A    +LASD
Sbjct: 189 AEYGVRINAVAPS-IAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASD 245

Length = 262

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 79.9 bits (197), Expect = 2e-18
 Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 10/199 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
              +  + +LG   + L  D+RK +    ++E  +  FG +DILVN A       A + S
Sbjct: 46  TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFS 105

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              +  V+ ++    F M   A K+    G       +GG IINI++ L +         
Sbjct: 106 EKDWDDVMNLNIKSVFFMSQAAAKHFIAQG-------NGGKIINIASMLSFQGGIRVPSY 158

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAY 187
           +A+K+ V  +TR +A EW   + I VN IAPG +  T    +L  +E RS    D + A 
Sbjct: 159 TASKSGVMGVTRLMANEWAK-HNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAG 216

Query: 188 KFGEKWDIAMAALYLASDA 206
           ++G   D+    ++LAS A
Sbjct: 217 RWGLPSDLMGPVVFLASSA 235

Length = 253

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 79.6 bits (197), Expect = 3e-18
 Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 18/214 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L  A + L + G   + +  D+   ED  R+VE   + FG++DILVN A G   
Sbjct: 32  ARNRENLERAASELRAGGAGVLAVVADLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPP 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +L+   +    ++  +    +    L  +K+           G I+NIS+      
Sbjct: 92  GPFAELTDEDWLEAFDLKLLSVIRIVRAVLPGMKE--------RGWGRIVNISSLTVKEP 143

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLA 172
               +  + A+A +  + ++L+ E   D  + VN + PG I         +  A    ++
Sbjct: 144 EPNLVLSNVARAGLIGLVKTLSRELAPD-GVTVNSVLPGYIDTERVRRLLEARAEKEGIS 202

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            EE   +    +   + G+  ++A    +LAS+ 
Sbjct: 203 VEEAEKEVASQIPLGRVGKPEELAALIAFLASEK 236

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 4e-18
 Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN 59
             R +  L  A A L++ G   +GL  DVR   D  R V++ +  FG LD+L+ NA  G+
Sbjct: 36  TARDQKELEEAAAELNNKG-NVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGH 94

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           F  P E+L+P  +R VI+ +  G F     A+  LK+G         GG IINIS+    
Sbjct: 95  F-APVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG---------GGYIINISSLAGT 144

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                    +A+K  +   + +  L+    Y I+V+ I PG
Sbjct: 145 NFFAGGAAYNASKFGLVGFSEAAMLDL-RQYGIKVSTIMPG 184

Length = 237

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 78.8 bits (195), Expect = 5e-18
 Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 20/204 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPA 64
           L  AVA   +LG    G   +V   ED           FG+L+ L+N A       LV A
Sbjct: 42  LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKA 101

Query: 65  ED------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
           +D      +S   F++VI+++  G F+   EA   + + G         G+IINIS+   
Sbjct: 102 KDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIAR 154

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 Q + SA+KA V ++T + A E    Y IRV  IAPG I+ T   + + P E   
Sbjct: 155 A-GNMGQTNYSASKAGVAAMTVTWAKELAR-YGIRVAAIAPGVIE-TEMTAAMKP-EALE 210

Query: 179 KATDYMAAYKFGEKWDIAMAALYL 202
           +    +   + GE  +IA    ++
Sbjct: 211 RLEKMIPVGRLGEPEEIAHTVRFI 234

Length = 253

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 79.0 bits (195), Expect = 7e-18
 Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 10/156 (6%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            R  +A          GL  DV   ED   +++   +H+  L ILVN A GN    A D 
Sbjct: 49  ARDELAEEFP-EREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDY 107

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           + + +R + E +    F +   A   LK+         +   I+NI +    T       
Sbjct: 108 TEDEWRGIFETNLFSAFELSRYAHPLLKQ--------HASSAIVNIGSVSGLTHVRSGAP 159

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
               KAA+  +TR+LA+EW  D  IRVN +AP  I+
Sbjct: 160 YGMTKAALLQMTRNLAVEWAED-GIRVNAVAPWYIR 194

Length = 257

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 78.1 bits (193), Expect = 1e-17
 Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 15/182 (8%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTF 84
           DV   E      +  I  FG++DIL+N A        + A  L P  +   I+++  G  
Sbjct: 57  DVTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPP-WEKTIDVNLTGVI 115

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
              + AL Y+ K   G      GG+I+NI +             SA+K  V   TRSLA 
Sbjct: 116 NTTYLALHYMDKNKGG-----KGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLAD 170

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
                  +RVN I PG   +T  +      ++ +K  + + +        +A A +YL  
Sbjct: 171 LLEYKTGVRVNAICPGFT-NTPLL-----PDLVAKEAEMLPSAPTQSPEVVAKAIVYLIE 224

Query: 205 DA 206
           D 
Sbjct: 225 DD 226

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 77.8 bits (192), Expect = 2e-17
 Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
                + + G  A+ +  DVR  ED VR +VE+T++ FG+LDILVN A   +L   ED  
Sbjct: 54  ETAEEIEAAGGQALPIVVDVRD-EDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTP 112

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              F  +  ++  GT+++   AL ++ K G+G         I+NIS  L        +  
Sbjct: 113 AKRFDLMQRVNLRGTYLLSQAALPHMVKAGQGH--------ILNISPPLSLRPARGDVAY 164

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
           +A KA +  +T  LA E    + I VN + P    +T   ++L+     ++A  
Sbjct: 165 AAGKAGMSRLTLGLAAELR-RHGIAVNSLWPSTAIETPAATELSGGSDPARARS 217

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 77.1 bits (190), Expect = 3e-17
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 18/192 (9%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTV 75
           G  AI ++ DV   + A  + ++T++ FG +D LVN AA   G  L     +  + ++  
Sbjct: 54  GGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKF 113

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAA 134
           + ++  G  +      K++ K G        GG I+N S+    TA W Y      AK  
Sbjct: 114 MSVNLDGALVCTRAVYKHMAKRG--------GGAIVNQSS----TAAWLYSNFYGLAKVG 161

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           ++ +T+ LA E G    IRVN IAPGPI DT     + P+E  +     +   + G   D
Sbjct: 162 LNGLTQQLARELGG-MNIRVNAIAPGPI-DTEATRTVTPKEFVADMVKGIPLSRMGTPED 219

Query: 195 IAMAALYLASDA 206
           +    L+L SD 
Sbjct: 220 LVGMCLFLLSDE 231

Length = 250

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 3e-17
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 12/163 (7%)

Query: 46  FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 104
            G+LDILVN AA N +     D     F+  ++++  G F M  EA K +K+ G      
Sbjct: 83  HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG------ 136

Query: 105 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
             GG I+N+++    +   +Q   S  KAAV S+T++ A E      IRVN + PG + D
Sbjct: 137 --GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPF-GIRVNALLPG-LTD 192

Query: 165 TAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           T   S L   + I  +A  ++   +  E  ++A A LYLASDA
Sbjct: 193 TKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA 235

Length = 252

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 76.5 bits (189), Expect = 3e-17
 Identities = 56/202 (27%), Positives = 80/202 (39%), Gaps = 37/202 (18%)

Query: 20  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTV 75
           +PA  +  DV   ED   + E      GK+D LV++ A         P  D S  GF   
Sbjct: 44  LPADVIPLDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKA 103

Query: 76  IEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
           ++I S  +FI +   A   + +GG   A S                       +  AKAA
Sbjct: 104 LDI-SAYSFISLAKAAKPLMNEGGSIVALSYIAAE----------RVFPGYGGMGVAKAA 152

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW- 193
           ++S+ R LA E G    IRVN I+ GP K TAG          S    +    ++ E+  
Sbjct: 153 LESLARYLAYELG-RKGIRVNTISAGPTKTTAG----------SGIGGFDKMVEYAEEMA 201

Query: 194 ---------DIAMAALYLASDA 206
                    ++A AA +L SD 
Sbjct: 202 PLGRNASAEEVANAAAFLLSDL 223

Length = 239

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 76.7 bits (189), Expect = 4e-17
 Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 9/205 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L +AVAAL + G  A  L  D+   E             G+LDILVN       
Sbjct: 42  GRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDR 101

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +L     R ++E D V   ++   A + +K+ G         G II I++     A
Sbjct: 102 RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG--------YGRIIAITSIAGQVA 153

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                   AAK  +  + R+LA E+G  + I  N IAPG        +  A   +     
Sbjct: 154 RAGDAVYPAAKQGLTGLMRALAAEFGP-HGITSNAIAPGYFATETNAAMAADPAVGPWLA 212

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
                 ++G   +IA AA++LAS A
Sbjct: 213 QRTPLGRWGRPEEIAGAAVFLASPA 237

Length = 256

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 76.6 bits (189), Expect = 4e-17
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 21/216 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +    +A       G   I L  DV K ++   ++ +    FG LDILVN A    +
Sbjct: 32  DFGEEGAEAAAKVAGDAGGSVIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHV 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P E+  P  +  +I +     F     AL ++KK G G+        IINI++     A
Sbjct: 92  APIEEFPPEDWDRIIAVMLTSAFHTIRAALPHMKKQGWGR--------IINIASAHGLVA 143

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           + ++    AAK  +  +T+ LALE   ++ I VN I PG +  T  V K   ++ +++  
Sbjct: 144 SPFKSAYVAAKHGLIGLTKVLALE-VAEHGITVNAICPGYV-RTPLVEKQIADQAKTRGI 201

Query: 182 DY-----------MAAYKFGEKWDIAMAALYLASDA 206
                            +F    ++A  ALYLASDA
Sbjct: 202 PEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDA 237

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 76.5 bits (189), Expect = 5e-17
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 22/209 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAED 66
           L    A +  LG  A+ +  D+   +    +V   +  FG++D LVN A     + P  D
Sbjct: 42  LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLAD 101

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQ 125
                +R VIE++ +GT  +       L +         SGG I+ I S  L ++   Y 
Sbjct: 102 ADFAHWRAVIELNVLGTLRLTQAFTPALAE---------SGGSIVMINSMVLRHSQPKYG 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-----PIKD----TAGVSKLAPEEI 176
            +   AK A+ + ++SLA E G    IRVN +APG     P+K      AG   +  E+I
Sbjct: 153 AY-KMAKGALLAASQSLATELG-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQI 210

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASD 205
            ++        +     ++A A L+LASD
Sbjct: 211 YAETAANSDLKRLPTDDEVASAVLFLASD 239

Length = 258

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 13/198 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSP 69
           A     +LG   + ++ D+                +G+LD+LVN A       P+ + S 
Sbjct: 306 AKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSA 365

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             F  V +++  G F     A +            S GG+I+N+ +     A   +    
Sbjct: 366 EDFTRVYDVNLSGAFACARAAAR----------LMSQGGVIVNLGSIASLLALPPRNAYC 415

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-K 188
           A+KAAV  ++RSLA EW     IRVN +APG I+  A ++  A       +        +
Sbjct: 416 ASKAAVTMLSRSLACEWAP-AGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGR 474

Query: 189 FGEKWDIAMAALYLASDA 206
            G+  ++A A  +LAS A
Sbjct: 475 LGDPEEVAEAIAFLASPA 492

Length = 520

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 74.9 bits (185), Expect = 2e-16
 Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 21/207 (10%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A  AL   G  AIG+  DV   E     ++  +  FG +DILVN A    + P ED    
Sbjct: 44  AAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTE 103

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++ +I I   G F+    AL  +K  G        GG IIN+++      +  +    +
Sbjct: 104 KWKKMIAIMLDGAFLTTKAALPIMKAQG--------GGRIINMASVHGLVGSAGKAAYVS 155

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-- 188
           AK  +  +T+ +ALE G  + + VN I PG + DT  V K  P+  + +        +  
Sbjct: 156 AKHGLIGLTKVVALE-GATHGVTVNAICPGYV-DTPLVRKQIPDLAKERGISEEEVLEDV 213

Query: 189 ---------FGEKWDIAMAALYLASDA 206
                    F    +IA  AL+LAS A
Sbjct: 214 LLPLVPQKRFTTVEEIADYALFLASFA 240

Length = 258

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 75.2 bits (185), Expect = 2e-16
 Identities = 59/206 (28%), Positives = 85/206 (41%), Gaps = 13/206 (6%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R ++ L      + + G  A  +  D+   E    +    +  FG+LDI+VN   G    
Sbjct: 42  RTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPN 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P    S          +      +   A+  + +        S GG +INIS+T+   A 
Sbjct: 102 PLLSTSTKDLADAFTFNVATAHALTVAAVPLMLE-------HSGGGSVINISSTMGRLAG 154

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                   AKAA+   TR  AL    D    IRVN IAPG I  +A     A +E+R+  
Sbjct: 155 RGFAAYGTAKAALAHYTRLAAL----DLCPRIRVNAIAPGSILTSALEVVAANDELRAPM 210

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                  + G+  DIA AA+YLAS A
Sbjct: 211 EKATPLRRLGDPEDIAAAAVYLASPA 236

Length = 263

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 3e-16
 Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 33/220 (15%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
           GR      +  A L +LG  A+ ++ D+   ED  RVV +    FG+LD LVNAA     
Sbjct: 38  GRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDR 97

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
           G  L    D SP  F     ++    F +  EA+K +++  R        G I+NI +  
Sbjct: 98  GTIL----DTSPELFDRHFAVNVRAPFFLMQEAIKLMRR--RKAE-----GTIVNIGSMS 146

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA-----IRVNGIAPGPIKDTAGVSKL- 171
            +    +     A+K A+ ++TR+ A      YA     IRVNG+  G +  T G  ++ 
Sbjct: 147 AHGGQPFLAAYCASKGALATLTRNAA------YALLRNRIRVNGLNIGWM-ATEGEDRIQ 199

Query: 172 -----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                AP++   KA       +  +  ++A A  +L SD 
Sbjct: 200 REFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDE 239

Length = 260

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 74.0 bits (182), Expect = 4e-16
 Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 20/197 (10%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VA + + G  AI ++ DV       R+ ++    FG++D+LVN A    L    D     
Sbjct: 47  VAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLED 106

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS----ATLHYTATWYQIH 127
           F   I  +  G F++  EA ++L +GGR          IIN+S    A        Y   
Sbjct: 107 FDRTIATNLRGAFVVLREAARHLGQGGR----------IINLSTSVIALPLPGYGPY--- 153

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+KAAV+ +   LA E      I VN +APGP+      +  + E+I   A       
Sbjct: 154 -AASKAAVEGLVHVLANELRGR-GITVNAVAPGPVATELFFNGKSAEQIDQLA-GLAPLE 210

Query: 188 KFGEKWDIAMAALYLAS 204
           + G   +IA A  +LA 
Sbjct: 211 RLGTPEEIAAAVAFLAG 227

Length = 245

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 73.3 bits (180), Expect = 5e-16
 Identities = 50/181 (27%), Positives = 70/181 (38%), Gaps = 19/181 (10%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+   + A R V+     FG+LD LVN A         D   + +  +  ++   T    
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNAS 121

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             AL  L        ++S GG I+NI A     A       +AAKA V  +T +LA E  
Sbjct: 122 KAALPAL--------TASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL 173

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV 207
            D  I VN + P  I DT       P+   S         ++     IA    +L SD  
Sbjct: 174 -DRGITVNAVLPSII-DTPPNRADMPDADFS---------RWVTPEQIAAVIAFLLSDEA 222

Query: 208 Q 208
           Q
Sbjct: 223 Q 223

Length = 239

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 73.3 bits (180), Expect = 7e-16
 Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 15/202 (7%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLS 68
           +A A +  +   A+ L  DV   +    + E  +  FG LD+LVN A    L PA  D  
Sbjct: 39  AAQAVVAQIAGGALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTD 98

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              +   + I+  GTF+ C  A   +         +  GG I+N+S+    +        
Sbjct: 99  LAVWDQTMAINLRGTFLCCRHAAPRMI--------ARGGGSIVNLSSIAGQSGDPGYGAY 150

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY- 187
            A+KAA+ ++TR+LA E      IR N +APG I     ++KLA  E       +     
Sbjct: 151 GASKAAIRNLTRTLAAELRHA-GIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIH 209

Query: 188 ----KFGEKWDIAMAALYLASD 205
               + G   D+A A ++L SD
Sbjct: 210 QLQGRLGRPEDVAAAVVFLLSD 231

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 73.0 bits (180), Expect = 7e-16
 Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 13/208 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-F 60
            RR+  L   VA + + G  A+ L GDVR    A  +V   +  FG LDI  N A     
Sbjct: 37  ARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGE 96

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + P  ++S  G+R  +  +    F+     +  +   G        GG +I  S  + +T
Sbjct: 97  MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG--------GGSLIFTSTFVGHT 148

Query: 121 ATWYQIHVSAA-KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRS 178
           A +  +   AA KA +  +T+ LA E+G    IRVN + PG   DT     +    E  +
Sbjct: 149 AGFPGMAAYAASKAGLIGLTQVLAAEYGAQ-GIRVNALLPGGT-DTPMGRAMGDTPEALA 206

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
                 A  +  +  +IA AAL+LASDA
Sbjct: 207 FVAGLHALKRMAQPEEIAQAALFLASDA 234

Length = 254

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 73.7 bits (182), Expect = 2e-15
 Identities = 61/215 (28%), Positives = 88/215 (40%), Gaps = 34/215 (15%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLS 68
            A AA       A+G+  DV          E     FG +DI+V+  AG  +  P E+ S
Sbjct: 460 EAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVS-NAGIAISGPIEETS 518

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---TATWYQ 125
              +R   ++++ G F++  EA++ +K  G G      G I+   S            Y 
Sbjct: 519 DEDWRRSFDVNATGHFLVAREAVRIMKAQGLG------GSIVFIASKNAVNPGPNFGAY- 571

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP------------GPIKDTAGVSKLAP 173
               AAKAA   + R LALE G D  IRVNG+ P              I+  A    L+ 
Sbjct: 572 ---GAAKAAELHLVRQLALELGPD-GIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSE 627

Query: 174 EEIRSKATDYMAAYKFGEKW---DIAMAALYLASD 205
           EE+      Y A      +    D+A A ++LAS 
Sbjct: 628 EEL---EEFYRARNLLKREVTPEDVAEAVVFLASG 659

Length = 681

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 71.3 bits (175), Expect = 3e-15
 Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 19/210 (9%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +    + V A+   G  A+ +  DV    D +R+ E+     G+LD LVN A    L 
Sbjct: 35  RNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAG--ILE 92

Query: 63  PA---EDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATL 117
                E +       +   + VG+F+   EA+K +  + GGR       GG I+N+S+  
Sbjct: 93  AQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGR-------GGAIVNVSSMA 145

Query: 118 -HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
               +    I  +A+K A+D++T  LA E   +  IRVN + PG I      S   P  +
Sbjct: 146 ARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE-GIRVNAVRPGVIYTEIHASGGEPGRV 204

Query: 177 -RSKATDYMAAYKFGEKWDIAMAALYLASD 205
            R KA   M   + G   ++A A L+L SD
Sbjct: 205 DRVKAGIPMG--RGGTAEEVARAILWLLSD 232

Length = 248

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 71.1 bits (175), Expect = 4e-15
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 26/192 (13%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A  L+ D+   +    +V + +  FG+LD LVN A+  +  P   ++   +  +   +  
Sbjct: 59  AAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLK 118

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDS 137
             F +   A   L+K           G I+NI   +H  A      Y ++  AAKAA++ 
Sbjct: 119 APFFLSQAAAPQLRK---------QRGAIVNI-TDIH--AERPLKGYPVY-CAAKAALEM 165

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPI---KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           +TRSLALE   +  +RVN +APG I   +D         EE R          + G   D
Sbjct: 166 LTRSLALELAPE--VRVNAVAPGAILWPED----GNSFDEEARQAILARTPLKRIGTPED 219

Query: 195 IAMAALYLASDA 206
           IA A  +L +DA
Sbjct: 220 IAEAVRFLLADA 231

Length = 249

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 5e-15
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 12/158 (7%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLV 62
           R  ++    A L + G  A+ L  D+     A   + + +  FG++D+L+N   G  +  
Sbjct: 40  RSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAK 99

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E+         I      T   C   L ++   G        GG I+N+S+    T  
Sbjct: 100 PFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG--------GGAIVNVSSIA--TRG 149

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
             ++  SAAK  V+++T SLA E+  ++ IRVN +APG
Sbjct: 150 INRVPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPG 186

Length = 260

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 71.1 bits (175), Expect = 5e-15
 Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            RR+  L    +    LG P    +  D+   EDA +VVE  +  FG LDIL+N A  + 
Sbjct: 34  ARREERLEEVKSECLELGAPSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGISM 93

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
                D S +  R ++E++  G   +   AL +L +  +G         I+ +S+     
Sbjct: 94  RSLFHDTSIDVDRKIMEVNYFGPVALTKAALPHLIERSQGS--------IVVVSSIAGKI 145

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
              ++   +A+K A+     SL  E  ++  I V  + PG I 
Sbjct: 146 GVPFRTAYAASKHALQGFFDSLRAEL-SEPNISVTVVCPGLID 187

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 7e-15
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 8/160 (5%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G  D LVN A    L  A D++  GF  V+ +++ G  ++            R   ++  
Sbjct: 76  GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHV-------ARAMIAAGR 128

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           GG I+N+S+          +   A+KAA+D+ITR L +E G  + IRVN + P       
Sbjct: 129 GGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG-PHGIRVNSVNPTVTLTPM 187

Query: 167 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                +  +        +   +F E  D+A   L+L SDA
Sbjct: 188 AAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA 227

Length = 245

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 70.0 bits (171), Expect = 1e-14
 Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 8/153 (5%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L +A A    +G  A  +  DV  +    R V + ++ +G +DILVN AA   L P  D+
Sbjct: 37  LEAARATAAEIGPAACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDI 96

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   +  +  I+  GT  M     + +   GR       GG IIN+++            
Sbjct: 97  TRESYDRLFAINVSGTLFMMQAVARAMIAQGR-------GGKIINMASQAGRRGEALVGV 149

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
             A KAAV S+T+S  L     + I VN IAPG
Sbjct: 150 YCATKAAVISLTQSAGLNL-IRHGINVNAIAPG 181

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 69.1 bits (170), Expect = 2e-14
 Identities = 57/211 (27%), Positives = 82/211 (38%), Gaps = 51/211 (24%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLS 68
            LG  A+ L  DV   E+   +       +GKLD LV++ A        G FL    D S
Sbjct: 49  RLGESALVLPCDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFL----DTS 104

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH- 127
             GF   ++I +     +   AL  +  GG          I+     TL Y  +   +  
Sbjct: 105 RKGFLKALDISAYSLVSLAKAALPIMNPGG---------SIV-----TLSYLGSERVVPG 150

Query: 128 ---VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
              +  AKAA++S  R LA E G    IRVN I+ GPIK  A           S  T + 
Sbjct: 151 YNVMGVAKAALESSVRYLAYELG-RKGIRVNAISAGPIKTLAA----------SGITGFD 199

Query: 185 AAYKFGEKW----------DIAMAALYLASD 205
              ++ E+           ++   A +L SD
Sbjct: 200 KMLEYSEQRAPLGRNVTAEEVGNTAAFLLSD 230

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 69.0 bits (169), Expect = 3e-14
 Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 17/201 (8%)

Query: 11  AVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDL 67
           AVAA   LG P I  +  DV    D    V++ +  FG+LDI+ N A   G       + 
Sbjct: 43  AVAA--ELGDPDISFVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILET 100

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           S   F  V++++  G F+    A + +    +G         I+++++            
Sbjct: 101 SLEEFERVLDVNVYGAFLGTKHAARVMIPAKKGS--------IVSVASVAGVVGGLGPHA 152

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K AV  +TRS A E G ++ IRVN ++P  +      +    E+   +     AA 
Sbjct: 153 YTASKHAVLGLTRSAATELG-EHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAAN 211

Query: 188 KFG---EKWDIAMAALYLASD 205
             G      DIA A LYLASD
Sbjct: 212 LKGTALRPEDIAAAVLYLASD 232

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 69.1 bits (169), Expect = 3e-14
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 25/193 (12%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
            + DV  +E  ++ ++  I+ +G++DILVN A          +  + +  +I ++  G F
Sbjct: 49  FKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIF 108

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           +M    + Y+ K           G+IINI++   +  T        +K AV  +TRS+A+
Sbjct: 109 LMSKYTIPYMLKQD--------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAV 160

Query: 145 EWGTDYA--IRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAY---KFGEK 192
               DYA  IR   + PG I  T  +   A       PE +  K  ++   +   + G+ 
Sbjct: 161 ----DYAPTIRCVAVCPGSI-RTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKP 215

Query: 193 WDIAMAALYLASD 205
            ++A    +LASD
Sbjct: 216 EEVAYVVAFLASD 228

Length = 258

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 68.8 bits (169), Expect = 4e-14
 Identities = 54/168 (32%), Positives = 76/168 (45%), Gaps = 20/168 (11%)

Query: 2   GRRKTVL-RSA--VAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G R  VL RSA  +A+L    G   + +EGDV    D  R V+ T++ FGKLD  V NA 
Sbjct: 30  GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAG 89

Query: 57  AGNFLVPAEDLSPN----GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
             ++     D+        F  +  ++  G  +    AL  LK  G        G +I  
Sbjct: 90  IWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--------GSMIFT 141

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
           +S +  Y      ++  A+K AV  + R LA E      IRVNG+APG
Sbjct: 142 LSNSSFYPGGGGPLYT-ASKHAVVGLVRQLAYELAPK--IRVNGVAPG 186

Length = 263

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 68.5 bits (168), Expect = 4e-14
 Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 10/179 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+    +  + ++  I   G++D+LVN A      P  D+  + +R +  +D  G F+  
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCS 119

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             A +++ K G+       GG IINI++   +T        +AAK A+  +T+++ALE  
Sbjct: 120 QIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALEL- 171

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            ++ I VN +APG I     ++ +   +++  +   +   + G+  +IA    +L S+ 
Sbjct: 172 VEHGILVNAVAPGAI--ATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEG 228

Length = 256

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 6e-14
 Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL-VNAAAGNFLVPAEDLSPNG 71
           AA   LG  A+ +  D         + ++    FG+LD + +NA    F  P ED     
Sbjct: 45  AARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFA-PLEDWDEAM 103

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F      +  G + +    L  L       AS     I++N S   H       ++ +A+
Sbjct: 104 FDRSFNTNVKGPYFLIQALLPLLANP----AS-----IVLNGSINAHIGMPNSSVY-AAS 153

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAY--- 187
           KAA+ S+ ++L+ E      IRVN ++PGP+  T    KL  PE         + A    
Sbjct: 154 KAALLSLAKTLSGEL-LPRGIRVNAVSPGPV-QTPLYGKLGLPEATLDAVAAQIQALVPL 211

Query: 188 -KFGEKWDIAMAALYLASD 205
            +FG   +IA A LYLASD
Sbjct: 212 GRFGTPEEIAKAVLYLASD 230

Length = 249

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 67.8 bits (166), Expect = 7e-14
 Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 14/174 (8%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VA     G  A+G++ DV          E  +  FG LDI+V+ A      P  + S   
Sbjct: 41  VAEAAQGGPRALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLED 100

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHV 128
           +   ++I+  G F++  EA + +K  G G      G I+ N S         A  Y    
Sbjct: 101 WNRSMDINLTGHFLVSREAFRIMKSQGIG------GNIVFNASKNAVAPGPNAAAY---- 150

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
           SAAKAA   + R LALE G +  IRVN + P  +   + + +      R+KA  
Sbjct: 151 SAAKAAEAHLARCLALEGG-EDGIRVNTVNPDAVFRGSKIWEGVWRAARAKAYG 203

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 8e-14
 Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 11/161 (6%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           +A   + + G  A+ L GDVR  +     V   +  FG +DI VN A+   L   ED   
Sbjct: 52  TAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPM 111

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             F  + +I+  GTF++    L +LKK        S    I+ +S  L+    W+  H +
Sbjct: 112 KRFDLMQQINVRGTFLVSQACLPHLKK--------SENPHILTLSPPLNLDPKWFAPHTA 163

Query: 130 --AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 168
              AK  +   T  LA E+  D  I VN + P     TA V
Sbjct: 164 YTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIATAAV 203

Length = 273

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 9e-14
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 8/143 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  L +  A + + G  A+ +  DV   E      +      G +D  VN A      
Sbjct: 40  RGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFG 99

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P ED++P  FR V E+  +G       AL++++   R        G II + + L Y + 
Sbjct: 100 PFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDR--------GAIIQVGSALAYRSI 151

Query: 123 WYQIHVSAAKAAVDSITRSLALE 145
             Q    AAK A+   T SL  E
Sbjct: 152 PLQSAYCAAKHAIRGFTDSLRCE 174

Length = 334

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 58/188 (30%), Positives = 80/188 (42%), Gaps = 23/188 (12%)

Query: 2   GRRKTVL-RSA--VAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G +  VL RSA  VA L    G   +G+EGDVR   D  R V   +  FGKLD  + NA 
Sbjct: 28  GAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSLADNERAVARCVERFGKLDCFIGNAG 87

Query: 57  AGNFL-----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 111
             ++      +P E L    F  +  I+  G  +    AL  L          + G +I 
Sbjct: 88  IWDYSTSLVDIPEEKLDE-AFDELFHINVKGYILGAKAALPALYA--------TEGSVIF 138

Query: 112 NISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSK 170
            +S    Y      ++  A+K AV  + + LA E      IRVNG+APG +  D  G + 
Sbjct: 139 TVSNAGFYPGGGGPLYT-ASKHAVVGLVKQLAYELAPH--IRVNGVAPGGMVTDLRGPAS 195

Query: 171 LAPEEIRS 178
           L   E   
Sbjct: 196 LGQGETSI 203

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 66.9 bits (163), Expect = 1e-13
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 16/183 (8%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL---SPNGFRTVIEIDSVGTF 84
           D+ +++D   +V   +   G +DIL+N A    ++  +DL       +  VI I+    F
Sbjct: 63  DLIQQKDIDSIVSQAVEVMGHIDILINNAG---IIRRQDLLEFGNKDWDDVININQKTVF 119

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +     K   K G       +GG IINI++ L +         +A+K+AV  +TR+LA 
Sbjct: 120 FLSQAVAKQFVKQG-------NGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALAT 172

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLA 203
           E  + Y I VN IAPG +  T   + L  +  R++A  + + A ++G   D+A  A++L+
Sbjct: 173 EL-SQYNINVNAIAPGYMA-TDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLS 230

Query: 204 SDA 206
           S A
Sbjct: 231 SSA 233

Length = 251

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.0 bits (164), Expect = 1e-13
 Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 37/213 (17%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLV------ 62
           +A A    LG  AI L+ DV  RE    +  +   HFGK +  +VN A  +F        
Sbjct: 42  AAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARK 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
            A+D++   F+  +E    G       AL  +++ G G+        IINI   L     
Sbjct: 102 KADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGR--------IINIGTNL----- 148

Query: 123 WYQIHV------SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
            +Q  V      + AKAA+  +TR+LA E G  Y I VN ++ G ++ T   S   P+E+
Sbjct: 149 -FQNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVNMVSGGLLRTT-DASAATPDEV 205

Query: 177 RSKATDYMAA----YKFGEKWDIAMAALYLASD 205
                D +AA     K     + A A L+ AS 
Sbjct: 206 ----FDLIAATTPLRKVTTPQEFADAVLFFASP 234

Length = 253

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 19/157 (12%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAED------LSPNGFRTVIEI 78
           DV   E+    V   I  FG++D LVN A  N    LV  +D      L+   F  +  I
Sbjct: 57  DVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNI 116

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +  G F+M     + + K           G+I+N+S+      +  Q   +A KAA++S 
Sbjct: 117 NQKGVFLMSQAVARQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALNSF 168

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
           TRS A E G  + IRV G+APG I +  G+     EE
Sbjct: 169 TRSWAKELG-KHNIRVVGVAPG-ILEATGLRTPEYEE 203

Length = 266

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 66.7 bits (163), Expect = 2e-13
 Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 14/189 (7%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A     DV        ++    +  G L +LVN A        E +  + +R V+ I+  
Sbjct: 53  AFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVE 112

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
             F+ C  AL YL+              I+NIS+   + A       +A+KAAV S+T+S
Sbjct: 113 SIFLGCKHALPYLRASQPAS--------IVNISSVAAFKAEPDYTAYNASKAAVASLTKS 164

Query: 142 LALEWG-TDYAIRVNGIAPGPIKDT---AGVSK-LAPEEIRSKATDYMAAYKFGEKWDIA 196
           +AL+       +R N I P  I  T     + + L  EE   K    +   + GE  D+A
Sbjct: 165 IALDCARRGLDVRCNSIHPTFI-RTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVA 223

Query: 197 MAALYLASD 205
            A LYLASD
Sbjct: 224 HAVLYLASD 232

Length = 251

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 46/195 (23%), Positives = 76/195 (38%), Gaps = 14/195 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
               L++L   A+ ++ D+        +V +    FG+ D+LVN A+  +  P    S +
Sbjct: 41  LKDELNALRNSAVLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSED 100

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +  I+    +++     + L     G         IINI   +             
Sbjct: 101 AWAELFGINLKAPYLLIQAFARRLAGSRNGS--------IINIIDAMTDRPLTGYFAYCM 152

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KAA++ +TRS ALE   +  IRVNGIAPG I     +     E    K           
Sbjct: 153 SKAALEGLTRSAALELAPN--IRVNGIAPGLILLPEDMDAEYRENALRKVPLKRR----P 206

Query: 191 EKWDIAMAALYLASD 205
              +IA A ++L   
Sbjct: 207 SAEEIADAVIFLLDS 221

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 21/208 (10%)

Query: 7   VLRSAVAALHSLGIPA--IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA 64
           +   A AA+      A  + +  DV         V +    FG LD+LVN A  N     
Sbjct: 43  LAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADP 102

Query: 65  EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 124
             ++   +R    +D  G +  C   L  + + GRG         I+NI++T  +     
Sbjct: 103 LAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGS--------IVNIASTHAFKIIPG 154

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYA---IRVNGIAPGPIKDTAGVSKLA----PEEIR 177
                 AK  +  +TR+L +E    YA   +RVN IAPG I+             P   R
Sbjct: 155 CFPYPVAKHGLLGLTRALGIE----YAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAAR 210

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASD 205
           ++        + G   ++AM A++LASD
Sbjct: 211 AETLALQPMKRIGRPEEVAMTAVFLASD 238

Length = 260

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 66.0 bits (161), Expect = 3e-13
 Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 10/187 (5%)

Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           I +  D+   E    +V        +LD+LVN A   +  P E    +G+  V++I+   
Sbjct: 57  IAIPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKS 116

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRS 141
            F +    L  L+     +  +     +INI +      +  + +   A+KAAV  +TR 
Sbjct: 117 VFFLTQALLPLLRAAATAENPAR----VINIGSIAGIVVSGLENYSYGASKAAVHQLTRK 172

Query: 142 LALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           LA E   ++ I VN IAPG    K TA +               +   ++G   D+A  A
Sbjct: 173 LAKELAGEH-ITVNAIAPGRFPSKMTAFLLN--DPAALEAEEKSIPLGRWGRPEDMAGLA 229

Query: 200 LYLASDA 206
           + LAS A
Sbjct: 230 IMLASRA 236

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 14/154 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSP 69
           AV  L + G+     + DV          +     +G LDILV NA            + 
Sbjct: 41  AVEKLRAEGLSVRFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTR 100

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
              R  ++ +  GT  +    L  LKK        S  G I+N+S+ L    + Y     
Sbjct: 101 EQARETMKTNFFGTVDVTQALLPLLKK--------SPAGRIVNVSSGLGSLTSAYG---- 148

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
            +KAA++++TR LA E   +  I+VN   PG +K
Sbjct: 149 VSKAALNALTRILAKEL-KETGIKVNACCPGWVK 181

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 63.7 bits (155), Expect = 2e-12
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 15/170 (8%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
           AA        +GL GDVR   D  R V++    FG LD LVN A    + P E+L+P  +
Sbjct: 39  AAAAQELEGVLGLAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEW 98

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
           R V++ +  G F   H+A   L + G        GG I+N+ +     A       +A+K
Sbjct: 99  RLVLDTNLTGAFYCIHKAAPALLRRG--------GGTIVNVGSLAGKNAFKGGAAYNASK 150

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVS-----KLAPEEI 176
             +  ++ +  L+   +  IRV  + PG +    AG       KLAPE++
Sbjct: 151 FGLLGLSEAAMLDL-REANIRVVNVMPGSVDTGFAGSPEGQAWKLAPEDV 199

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 64.0 bits (156), Expect = 2e-12
 Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 21/180 (11%)

Query: 2   GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G R  VL  + A L  L    G   +G+EGDVR  +D    V   +  FGK+D L+ NA 
Sbjct: 29  GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAG 88

Query: 57  AGNFLVP----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
             ++        +D     F  V  I+  G  +    AL  L         +S G +I  
Sbjct: 89  IWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPAL--------VASRGSVIFT 140

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKL 171
           IS    Y      ++ +AAK AV  + + LA E      +RVNG+APG +  D  G   L
Sbjct: 141 ISNAGFYPNGGGPLY-TAAKHAVVGLVKELAFELAP--YVRVNGVAPGGMSSDLRGPKSL 197

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 16/182 (8%)

Query: 2   GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            RR+  L +    L    G+    +  D+   E   R+ +      G +D+LVN A    
Sbjct: 37  ARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGT 96

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  +LS +    +I+++ +    +    L  + + G G         IINI +     
Sbjct: 97  FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGH--------IINIGSAAGLI 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK------DTAGVSKLAPE 174
            T Y    SA KA V S + +L  E      ++V  + PGP +        + V  L+P 
Sbjct: 149 PTPYMAVYSATKAFVLSFSEALREELK-GTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPG 207

Query: 175 EI 176
           E+
Sbjct: 208 EL 209

Length = 265

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R    L      +  LG  AI +  DV       R  ++ +  FG++D  VN A      
Sbjct: 32  RSAEALHELAREVRELGGEAIAVVADVADAAQVERAADTAVERFGRIDTWVNNAGVAVFG 91

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
             ED++P  FR V +++ +G       AL +L++ G        GG +IN+ + L Y + 
Sbjct: 92  RFEDVTPEEFRRVFDVNYLGHVYGTLAALPHLRRRG--------GGALINVGSLLGYRSA 143

Query: 123 WYQIHVSAAKAAVDSITRSLALE 145
             Q   SA+K AV   T SL  E
Sbjct: 144 PLQAAYSASKHAVRGFTESLRAE 166

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 63.2 bits (154), Expect = 3e-12
 Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 11/182 (6%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           +EGDV   E     V       G +D+LVN A        + ++   +  VI+ +    F
Sbjct: 55  VEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVF 114

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +    +  +++ G G+        IINIS+       + Q + SAAKA +   T++LA 
Sbjct: 115 NVTQPVIDGMRERGWGR--------IINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQ 166

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E G    + VN I+PG I  T  V  +  E++ +     +   + G   +IA A  +LAS
Sbjct: 167 E-GATKGVTVNTISPGYI-ATDMVMAM-REDVLNSIVAQIPVGRLGRPEEIAAAVAFLAS 223

Query: 205 DA 206
           + 
Sbjct: 224 EE 225

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 55/209 (26%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
             + L  DV   E    +  +    +GKLD LV++ A        G++L    D S  GF
Sbjct: 57  SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYL----DTSREGF 112

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQI 126
              ++I S  +F  +   A   +  GG          I+     TL Y  +      Y +
Sbjct: 113 LIAMDI-SAYSFTALAKAARPLMNNGG---------SIL-----TLTYLGSERVVPNYNV 157

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
            +  AKAA+++  R LA + G    IRVN I+ GPI+  A           S   D+   
Sbjct: 158 -MGVAKAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAA----------SGIGDFRKM 205

Query: 187 YKFGEKW----------DIAMAALYLASD 205
            K  E            ++   A +L SD
Sbjct: 206 LKENEANAPLRRNVTIEEVGNTAAFLLSD 234

Length = 259

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 63.3 bits (154), Expect = 4e-12
 Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 38/199 (19%)

Query: 27  GDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
            DV   +D  R V+ T++ FG LDI+VN A   G       ++  + F  V +++  G F
Sbjct: 73  CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVF 132

Query: 85  I-MCHEA--LKYLKKG---GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           + M H A  +  LKKG        +S+ GG+         YT +         K AV  +
Sbjct: 133 LGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----GPHAYTGS---------KHAVLGL 178

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKW---- 193
           TRS+A E G  + IRVN ++P  +     ++ L PE+ R++  D +A ++ F  K     
Sbjct: 179 TRSVAAELG-KHGIRVNCVSPYAVPTALALAHL-PEDERTE--DALAGFRAFAGKNANLK 234

Query: 194 -------DIAMAALYLASD 205
                  D+A A L+LASD
Sbjct: 235 GVELTVDDVANAVLFLASD 253

Length = 280

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 62.8 bits (153), Expect = 4e-12
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++A   L   G  AI ++ DV  R+     V   ++ FG L+++VN A      P E ++
Sbjct: 40  QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETIT 99

Query: 69  PNGFRTVIEIDSVGTFI---MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
              F  V  I+  G         EA K L  GG+   ++S  G++ N    ++       
Sbjct: 100 EEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVY------- 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
              S+ K AV  +T++ A +  ++  I VN  APG +K
Sbjct: 153 ---SSTKFAVRGLTQTAARDLASE-GITVNAYAPGIVK 186

Length = 256

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 62.3 bits (152), Expect = 5e-12
 Identities = 43/152 (28%), Positives = 58/152 (38%), Gaps = 13/152 (8%)

Query: 33  EDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 91
           E A +VV S     GK+D L+  A G              +  + + +   +FI  H A 
Sbjct: 53  EQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLAT 112

Query: 92  KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTDY 150
           K+L  GG           ++   A      T   I   AAKAAV  +T+SLA E  G   
Sbjct: 113 KHLLSGGL----------LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPA 162

Query: 151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
               N I P  + DT    K  P+   S  T 
Sbjct: 163 GSTANAILPVTL-DTPANRKAMPDADFSSWTP 193

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 62.6 bits (152), Expect = 5e-12
 Identities = 60/206 (29%), Positives = 85/206 (41%), Gaps = 22/206 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR   L +    L + G  A+ LE DV   +     VE T+   G+LDILVN A    L
Sbjct: 34  ARRVDRLEALADELEAEGGKALVLELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLL 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P ED     +  +I+ + +G     H AL +            + G I+NIS+     A
Sbjct: 94  GPVEDADTTDWTRMIDTNLLGLMYTTHAALPHHL--------LRNKGTIVNISSVAGRVA 145

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKD--TAGVSKLAPEE 175
                  +A K  V++ +  L  E  T+  +RV  I PG     ++D  T  ++K A EE
Sbjct: 146 VRNSAVYNATKFGVNAFSEGLRQEV-TERGVRVVVIEPGTVDTELRDHITHTITKEAYEE 204

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALY 201
             S      A        DIA A  Y
Sbjct: 205 RISTIRKLQAE-------DIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 62.3 bits (152), Expect = 6e-12
 Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 28/194 (14%)

Query: 1   MGRRKTVL---RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57
            G +  +L    S    +  LG     +  DV   +D    +      FG+LDI+VN A 
Sbjct: 25  QGAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEKDVKAALALAKAKFGRLDIVVNCAG 84

Query: 58  -----------GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                      G      E      F+ VI ++ +GTF +   A   + K          
Sbjct: 85  IAVAAKTYNKKGQQPHSLEL-----FQRVINVNLIGTFNVIRLAAGAMGK----NEPDQG 135

Query: 107 G--GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
           G  G+IIN ++   +     Q   SA+K  +  +T  +A +      IRV  IAPG + D
Sbjct: 136 GERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLAPQ-GIRVVTIAPG-LFD 193

Query: 165 TAGVSKLAPEEIRS 178
           T  ++ L PE++R 
Sbjct: 194 TPLLAGL-PEKVRD 206

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 62.5 bits (152), Expect = 7e-12
 Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 17/200 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           AVA L   GI A     +V  +++    +E      G +D+L+N A      P  +    
Sbjct: 49  AVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQ 108

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI----SATLHYTATWYQI 126
            +  VI ++    F++     +Y+ K   G+        IINI    S     T T Y  
Sbjct: 109 EWNDVIAVNQTAVFLVSQAVARYMVKRQAGK--------IINICSMQSELGRDTITPY-- 158

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             +A+K AV  +TR + +E    + I+VNGIAPG  K     + +  E   +       A
Sbjct: 159 --AASKGAVKMLTRGMCVELAR-HNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA 215

Query: 187 YKFGEKWDIAMAALYLASDA 206
            ++G+  ++  AA++L+S A
Sbjct: 216 ARWGDPQELIGAAVFLSSKA 235

Length = 254

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 62.2 bits (151), Expect = 9e-12
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 10/204 (4%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
           R++  +  AVA L   G+   G    V K ED  R+V + +N  G +DILV NAA   F 
Sbjct: 42  RKQQNVDRAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFF 101

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               D +   +  +++++   T +M    +  ++K G        GG ++ +S+   +  
Sbjct: 102 GNILDSTEEVWDKILDVNVKATALMTKAVVPEMEKRG--------GGSVVIVSSVAAFHP 153

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  + +K A+  +T++LA E      IRVN +APG IK +   +    + +     
Sbjct: 154 FPGLGPYNVSKTALLGLTKNLAPELAPR-NIRVNCLAPGLIKTSFSSALWMDKAVEESMK 212

Query: 182 DYMAAYKFGEKWDIAMAALYLASD 205
           + +   + G+  D A    +L S+
Sbjct: 213 ETLRIRRLGQPEDCAGIVSFLCSE 236

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 60.6 bits (147), Expect = 3e-11
 Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 26/191 (13%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DV         V++T+  FG++D    NA         ED   + F  V+ I+  G F  
Sbjct: 62  DVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYG 121

Query: 87  CHEALKYLKKGGRGQA--SSSSGGI--IINISATLHYTATWYQIHVSAAKAAVDSITRSL 142
             + LK +++ G G    ++S GGI  + N            Q   +AAK  V  +TR+ 
Sbjct: 122 LEKVLKVMREQGSGMIVNTASVGGIRGVGN------------QSGYAAAKHGVVGLTRNS 169

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMA---AYKFGEKWDI 195
           A+E+G  Y IR+N IAPG I  T  V     +L PE       ++++     +FGE  ++
Sbjct: 170 AVEYG-QYGIRINAIAPGAIL-TPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEV 227

Query: 196 AMAALYLASDA 206
           A    +L SD 
Sbjct: 228 AAVVAFLLSDD 238

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 60.6 bits (147), Expect = 3e-11
 Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 27/210 (12%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLV 62
           +   V  + S G  A     D+   +            FG++D+L N A     AG    
Sbjct: 42  VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHE 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
              D+    F  ++ +D  GTF+M    L  + +          GG IIN S+     A 
Sbjct: 102 YPVDV----FDKIMAVDMRGTFLMTKMLLPLMME---------QGGSIINTSSFSGQAAD 148

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
            Y+   +AAK AV + T+S+A+E+G D  IR N IAPG I +T  V KL           
Sbjct: 149 LYRSGYNAAKGAVINFTKSIAIEYGRD-GIRANAIAPGTI-ETPLVDKLTGTSEDEAGKT 206

Query: 183 YMAAYKF-------GEKWDIAMAALYLASD 205
           +    K+       G+  ++A   ++LASD
Sbjct: 207 FRENQKWMTPLGRLGKPEEVAKLVVFLASD 236

Length = 272

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKR---EDAVRVVESTINHFGKLDILVNAAAGNFLVPA 64
           +R+ +AA H  G+  +    D+ K    ED V   +     FG +DILVN A    + P 
Sbjct: 43  VRAGLAAKH--GVKVLYHGADLSKPAAIEDMVAYAQRQ---FGGVDILVNNAGIQHVAPI 97

Query: 65  EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 124
           ED     +  +I ++    F     AL ++KK G G+        IINI++     A+  
Sbjct: 98  EDFPTEKWDAIIALNLSAVFHTTRLALPHMKKQGWGR--------IINIASVHGLVASAN 149

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           +    AAK  V  +T+ +ALE      +  N I PG +  T  V K      +       
Sbjct: 150 KSAYVAAKHGVVGLTKVVALE-TAGTGVTCNAICPGWV-LTPLVEKQISALAQKNGVPQE 207

Query: 185 AAY-----------KFGEKWDIAMAALYLASDA 206
            A            +F     +   A++LASDA
Sbjct: 208 QAARELLLEKQPSKQFVTPEQLGDTAVFLASDA 240

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 4/163 (2%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G +DILVN +  +      D++P  F  V + ++ G F +  E  K +    +G  ++  
Sbjct: 85  GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKP 144

Query: 107 GGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
           GG IINI A++       QI +   +KAAV  +TR++ALEWG  + I VN I PG I DT
Sbjct: 145 GGRIINI-ASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGR-HGINVNAICPGYI-DT 201

Query: 166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ 208
                    E   K    +   + G+  D+    L LA+D  Q
Sbjct: 202 EINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQ 244

Length = 258

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 8/167 (4%)

Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98
            E  +   G +D+LVN AA   L P  +++   F    +++      +     + +   G
Sbjct: 67  TEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVARGMIARG 126

Query: 99  RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158
                    G I+N+S+     A        + KAA+D +T+ +ALE G  + IRVN + 
Sbjct: 127 -------VPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGP-HKIRVNSVN 178

Query: 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           P  +    G    +  E   K  + +   KF E  D+  A L+L SD
Sbjct: 179 PTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSD 225

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 4e-11
 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 23/154 (14%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              L +L   A  ++ D+         VE T+  FG++D LVN A  N  V  E      
Sbjct: 47  AEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEA-GREA 105

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS-- 129
           F   +E + +  ++M H  L +LK          S G I+NIS+    TA   Q   S  
Sbjct: 106 FVASLERNLIHYYVMAHYCLPHLKA---------SRGAIVNISSK---TALTGQGGTSGY 153

Query: 130 -AAKAAVDSITRSLALEWGTD---YAIRVNGIAP 159
            AAK A  ++TR    EW        +RVN + P
Sbjct: 154 AAAKGAQLALTR----EWAVALAKDGVRVNAVIP 183

Length = 258

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 59.8 bits (145), Expect = 5e-11
 Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 9/205 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L +A  +L   G+ A  L  DV   +     +++     G +DILVN A   F 
Sbjct: 41  GRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFR 100

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P ED   + F  ++  +    F +     +++   G G+        IINI++     A
Sbjct: 101 TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGK--------IINIASVQSALA 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  +A K AV ++T+ +A +W   + ++ N IAPG        + +A  E  +   
Sbjct: 153 RPGIAPYTATKGAVGNLTKGMATDWAK-HGLQCNAIAPGYFDTPLNAALVADPEFSAWLE 211

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
               A ++G+  ++  A ++LASDA
Sbjct: 212 KRTPAGRWGKVEELVGACVFLASDA 236

Length = 255

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 59.6 bits (145), Expect = 5e-11
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 13/165 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR+  L +    + +    A+ L  DV  R      +E+    FG++DILVN A     
Sbjct: 37  ARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P ++   + +  +I+ +  G        L  + +   G         IIN+ +    Y 
Sbjct: 95  DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGH--------IINLGSIAGRYP 146

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
                ++  A KAAV + +  L  E      IRV  I+PG ++ T
Sbjct: 147 YPGGAVY-GATKAAVRAFSLGLRQELA-GTGIRVTVISPGLVETT 189

Length = 246

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 5e-11
 Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 21/186 (11%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-----PNGFRTVIEIDSVG 82
           DV   +    + ++    +G +DI  N A    + P ED S      + ++ V +++   
Sbjct: 59  DVTDEDAVNALFDTAAETYGSVDIAFNNAG---ISPPEDDSILNTGLDAWQRVQDVNLTS 115

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 142
            ++ C  AL ++ + G+G   +++  + +  SAT        QI  +A+K  V +++R L
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-------SQISYTASKGGVLAMSREL 168

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAA 199
            +++     IRVN + PGP+ +T  + +L    PE    +   ++   +F E  +IA A 
Sbjct: 169 GVQFARQ-GIRVNALCPGPV-NTPLLQELFAKDPERAARRLV-HVPMGRFAEPEEIAAAV 225

Query: 200 LYLASD 205
            +LASD
Sbjct: 226 AFLASD 231

Length = 255

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 6e-11
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 13/208 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R        VA +   G  A+ +  DV +  +   +VE TI  +G+LD    NA     
Sbjct: 38  DRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIE 97

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
                + S   F  ++ ++  G ++ M ++    L +G         GG I+N ++    
Sbjct: 98  QGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG---------GGAIVNTASVAGL 148

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRS 178
            A       +A+K AV  +T+S A+E+     IRVN + P  I  D    +  A      
Sbjct: 149 GAAPKMSIYAASKHAVIGLTKSAAIEYAKK-GIRVNAVCPAVIDTDMFRRAYEADPRKAE 207

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
            A       + G+  ++A A LYL SD 
Sbjct: 208 FAAAMHPVGRIGKVEEVASAVLYLCSDG 235

Length = 253

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 57.9 bits (141), Expect = 8e-11
 Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 18/139 (12%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            VA L +LG        DV  R+    ++ +     G LD +V+ A      P E+L+P 
Sbjct: 43  LVAELEALGAEVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---QIH 127
            F  V+     G + +                     G  +  S+            Q +
Sbjct: 103 RFERVLAPKVTGAWNLHELTRD------------LDLGAFVLFSSV---AGVLGSPGQAN 147

Query: 128 VSAAKAAVDSITRSLALEW 146
            +AA AA+D++      E 
Sbjct: 148 YAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 12/148 (8%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            IG+  DV  RE    + ++TI+ +G  DILVN A      P  ++        I  D  
Sbjct: 58  GIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFK 117

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
                  E  K +++GG     +S  GI      +++           A KAAV ++T+ 
Sbjct: 118 SVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIY----------GAMKAAVINLTKY 167

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVS 169
           LALE      IRVN IAPG +K   G S
Sbjct: 168 LALELAP--KIRVNAIAPGFVKTKLGES 193

Length = 252

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 58.7 bits (142), Expect = 1e-10
 Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 12/188 (6%)

Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77
            G     + GDV        VV + +   G++D+LVN AA         L    +  ++ 
Sbjct: 45  EGPNLFFVHGDVADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILS 104

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           ++  G + +       L K           G IINI++T  + +       +A+K  + +
Sbjct: 105 VNLTGPYELSRYCRDELIKN---------KGRIINIASTRAFQSEPDSEAYAASKGGLVA 155

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LA+  G D  IRVN I+PG I +T    +     +  +      A + G   DIA 
Sbjct: 156 LTHALAMSLGPD--IRVNCISPGWI-NTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIAN 212

Query: 198 AALYLASD 205
             L+L   
Sbjct: 213 LVLFLCQQ 220

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 1e-10
 Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 18/194 (9%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A G   D    +  + +       FG++D+LV  A         D     F   ++++ V
Sbjct: 55  AYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLV 114

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G F+   E  + + + G         G II I++      + +    SAAK     +T+S
Sbjct: 115 GYFLCAREFSRLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQS 167

Query: 142 LALEWGTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKFGE 191
           LAL+   +Y I V+ +  G +  +          A    + P+E+     D +   +  +
Sbjct: 168 LALDLA-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCD 226

Query: 192 KWDIAMAALYLASD 205
             D+    L+ AS 
Sbjct: 227 YQDVLNMLLFYASP 240

Length = 259

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 20/212 (9%)

Query: 2   GRRKTVLRSAVAALHSL-GIPAIGLE-GDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
           GR    L +A   + +L G  A+  E  DV   +   R V++     G+L  +V+ A G+
Sbjct: 38  GRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGS 97

Query: 60  FLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA-TL 117
             + P   +  + +R  ++++  GT  +   A + L +GG        GG  + IS+   
Sbjct: 98  ETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG--------GGSFVGISSIAA 149

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
             T  W+  +    K+AVD + +  A E G  + +RVN I PG I+           E+ 
Sbjct: 150 SNTHRWFGAY-GVTKSAVDHLMKLAADELGPSW-VRVNSIRPGLIRTDLVAPITESPELS 207

Query: 178 SKATDYMAAY---KFGEKWDIAMAALYLASDA 206
           +   DY A     + GE  D+A  A++L SDA
Sbjct: 208 A---DYRACTPLPRVGEVEDVANLAMFLLSDA 236

Length = 276

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 58.7 bits (142), Expect = 1e-10
 Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 23/215 (10%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV- 62
           R  ++   +A + + G  A     D+     A  VV + +  FG++D+L+N   G     
Sbjct: 36  RSELVHEVLAEILAAGDAAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAK 95

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E          I      T   C   L ++ +  R Q      G+I+N+S+    T  
Sbjct: 96  PYEHYEEEQIEAEIRRSLFPTLWCCRAVLPHMLE--RQQ------GVIVNVSSIA--TRG 145

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
            Y+I  SAAK  V+++T SLA E      IRVN +APG  +            +  +   
Sbjct: 146 IYRIPYSAAKGGVNALTASLAFEHA-RDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKV 204

Query: 183 YMAAY-----------KFGEKWDIAMAALYLASDA 206
           +               ++G   +   A L+LASD 
Sbjct: 205 WYQRIVDQTLDSSLMGRYGTIDEQVRAILFLASDE 239

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +T L S    L   G  A+ +  DV   E   R++E+ +  FG +DILVN A      
Sbjct: 33  RNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWS 92

Query: 63  PAEDLS-PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ--ASSSSGGII 110
             ++L+  + F  V+ ++ +G     H AL +LK   RGQ    SS  G+ 
Sbjct: 93  RFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA-SRGQIVVVSSLAGLT 142

Length = 263

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 17/201 (8%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           ++  G  A+  + DV  ++     ++     FG  D++VN A    + P  +++    + 
Sbjct: 44  INQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKK 103

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
           V  ++  G       A +  KK G        GG IIN ++   +         S+ K A
Sbjct: 104 VYNVNVKGVLFGIQAAARQFKKQG-------HGGKIINAASIAGHEGNPILSAYSSTKFA 156

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDT------AGVSKLAPEEIRSKATDYMAAYK 188
           V  +T++ A E      I VN   PG +K           S++A + I     ++ +   
Sbjct: 157 VRGLTQTAAQELAPKG-ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA 215

Query: 189 FG---EKWDIAMAALYLASDA 206
            G   E  D+A    +LAS+ 
Sbjct: 216 LGRPSEPEDVAGLVSFLASED 236

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 57.9 bits (140), Expect = 2e-10
 Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 11/198 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPN 70
           V  +   G  A  L+ D+      V +  +   H   L  LVN A   F     E+L+  
Sbjct: 43  VNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHVS 129
               V+  +  G F+ C EA+K +     G      GG I+N+S A     A    +  +
Sbjct: 103 RINRVLSTNVTGYFLCCREAVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYA 157

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYK 188
           A+K A+D++T  L+LE      IRVN + PG I      S   P  + R K+   M   +
Sbjct: 158 ASKGAIDTLTTGLSLEVAAQ-GIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ--R 214

Query: 189 FGEKWDIAMAALYLASDA 206
            G+  ++A A ++L SD 
Sbjct: 215 GGQPEEVAQAIVWLLSDK 232

Length = 247

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 26/163 (15%)

Query: 28  DVRKRED-AVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVG 82
           DV  R      + +      G+LD+L N A     G F    ED+       VI+I+  G
Sbjct: 56  DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPF----EDIPLEAHDRVIDINVKG 111

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSIT 139
                H AL YLK         + G  +IN S+    +A + Q  +   SA K AV  +T
Sbjct: 112 VLNGAHAALPYLKA--------TPGARVINTSSA---SAIYGQPGLAVYSATKFAVRGLT 160

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
            +L LEW   + IRV  + P  + DTA +      E+ + +T 
Sbjct: 161 EALDLEWR-RHGIRVADVMPLFV-DTAML-DGTSNEVDAGSTK 200

Length = 260

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 57.9 bits (140), Expect = 3e-10
 Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 19/186 (10%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDS 80
            E DV   E+    +       G +DILVN A       F      +S   +  VI  + 
Sbjct: 57  KELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFK----RMSHQEWNDVINTNL 112

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
              F +       + + G         G IINIS+       + Q + SAAKA +   T+
Sbjct: 113 NSVFNVTQPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTK 164

Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           +LA E G  Y I VN IAPG I  T  V +    E+     + +   + G   +IA A  
Sbjct: 165 ALASE-GARYGITVNCIAPGYIA-TPMVEQ-MGPEVLQSIVNQIPMKRLGTPEEIAAAVA 221

Query: 201 YLASDA 206
           +L S+A
Sbjct: 222 FLVSEA 227

Length = 245

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 58.1 bits (140), Expect = 3e-10
 Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 12/187 (6%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIE 77
           G  A+ L GD+   + A  +V       G LDI+   A     +P   DL+   F+    
Sbjct: 99  GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFA 158

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           I+    F +  EA+  L KG            II  S+   Y  + + +  +A KAA+ +
Sbjct: 159 INVFALFWLTQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILN 208

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
            +R LA +   +  IRVN +APGPI     +S    ++   +        + G+  ++A 
Sbjct: 209 YSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAP 267

Query: 198 AALYLAS 204
             +YLAS
Sbjct: 268 VYVYLAS 274

Length = 294

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 57.5 bits (139), Expect = 3e-10
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRV-VESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           +A   + + G  A+    D+R  ED VR  VE  +  FG +DILVN A+   L    D  
Sbjct: 49  TAAEEIEAAGGKALPCIVDIRD-EDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTP 107

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              +  ++ +++ GT++     L YLKK             I+N+S  L+    W++ H 
Sbjct: 108 MKRYDLMMGVNTRGTYLCSKACLPYLKKSKNPH--------ILNLSPPLNLNPKWFKNHT 159

Query: 129 --SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI--RSKATDYM 184
             + AK  +      +A E+     I VN + P     TA ++ L   ++    +  + M
Sbjct: 160 AYTMAKYGMSMCVLGMAEEFK-PGGIAVNALWPRTAIATAAMNMLGGVDVAACCRKPEIM 218

Query: 185 A 185
           A
Sbjct: 219 A 219

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 6e-10
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 19/202 (9%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLS 68
             A+ + G  A  + GDV    D + + ++  + FG+LD LVN A    + P+    D+ 
Sbjct: 44  ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAG--IVAPSMPLADMD 101

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLK--KGGRGQASSSSGGIIINISATLHYTATWYQ- 125
               R + + + +G ++   EA + L   +GGR       GG I+N+S+      +  + 
Sbjct: 102 AARLRRMFDTNVLGAYLCAREAARRLSTDRGGR-------GGAIVNVSSIASRLGSPNEY 154

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYM 184
           +  + +K AVD++T  LA E G    +RVN + PG I+     S   P    R  A   +
Sbjct: 155 VDYAGSKGAVDTLTLGLAKELGPH-GVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPL 213

Query: 185 AAYKFGEKWDIAMAALYLASDA 206
              + GE  ++A   ++L SDA
Sbjct: 214 G--RAGEADEVAETIVWLLSDA 233

Length = 248

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 56.8 bits (137), Expect = 7e-10
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 12/155 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDL 67
              V  + + G  A+ L GD++      ++VE  +   G LDILVN A     V    D+
Sbjct: 95  AEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADI 154

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   F    + +    F +C  A+ +L  G    AS      IIN  +   Y  +   + 
Sbjct: 155 TTEQFDATFKTNVYAMFWLCKAAIPHLPPG----AS------IINTGSIQSYQPSPTLLD 204

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162
            ++ KAA+ + T++LA +   +  IRVN +APGP+
Sbjct: 205 YASTKAAIVAFTKALAKQV-AEKGIRVNAVAPGPV 238

Length = 300

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 8e-10
 Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 22/201 (10%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           L   G     +  DVR        ++      G++DILVN A    L    D+S      
Sbjct: 49  LCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDF 108

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQ---ASSSSGGIIINISATLHYTATWYQIHVSAA 131
            I+I+  G + +    L  +     G+    SS +G ++ +   T +             
Sbjct: 109 HIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYAL----------T 158

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAY 187
           KAA+  +T+SLA+E+     IRVN I PG ++ T     +A    PE+  S  T+   A 
Sbjct: 159 KAAIVGLTKSLAVEYA-QSGIRVNAICPGYVR-TPMAESIARQSNPEDPESVLTEMAKAI 216

Query: 188 ---KFGEKWDIAMAALYLASD 205
              +  +  ++   A +LASD
Sbjct: 217 PLRRLADPLEVGELAAFLASD 237

Length = 263

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 22/147 (14%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+   E+  +     +   G  D++VN A  +     EDL+   F   ++++  G+  + 
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATL------HYTATWYQIHVSAAKAAVDSITRS 141
           H  L  +K+   G         I+ +S+         Y+A  Y      +K A+  +  S
Sbjct: 122 HAVLPLMKEQRPGH--------IVFVSSQAALVGIYGYSA--Y----CPSKFALRGLAES 167

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGV 168
           L  E    Y IRV+ + P    DT G 
Sbjct: 168 LRQEL-KPYNIRVSVVYPPDT-DTPGF 192

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 55.6 bits (134), Expect = 1e-09
 Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 38/201 (18%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRT 74
           GI    L  DV  +E     V +     G++D+L N A     G+ L    D   + +  
Sbjct: 47  GITTRVL--DVTDKEQ----VAALAKEEGRIDVLFNCAGFVHHGSIL----DCEDDDWDF 96

Query: 75  VIEIDSVGTFIMCHEAL-KYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAK 132
            + ++    ++M    L K L +           G IIN+ S          +   S  K
Sbjct: 97  AMNLNVRSMYLMIKAVLPKMLARK---------DGSIINMSSVASSIKGVPNRFVYSTTK 147

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAY 187
           AAV  +T+S+A ++     IR N I PG + DT  + +       PEE       + A  
Sbjct: 148 AAVIGLTKSVAADF-AQQGIRCNAICPGTV-DTPSLEERIQAQPDPEEAL---KAFAARQ 202

Query: 188 ---KFGEKWDIAMAALYLASD 205
              +     ++A  A+YLASD
Sbjct: 203 PLGRLATPEEVAALAVYLASD 223

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV  R      VE+ + HFG+LDI+VN A        E+++ +  R  I+ +  G   + 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVT 116

Query: 88  HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
              L YL++   G     SS GGI     + ++           A+K A++ ++ +LA E
Sbjct: 117 QAVLPYLREQRSGHIIQISSIGGISAFPMSGIY----------HASKWALEGMSEALAQE 166

Query: 146 WGTDYAIRVNGIAPGP 161
              ++ I+V  + PG 
Sbjct: 167 -VAEFGIKVTLVEPGG 181

Length = 275

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 17/163 (10%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--- 57
           + R +  L++    + + G+  +    DV   E+    +E   N  G +DIL+N A    
Sbjct: 37  LARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK 96

Query: 58  -GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
            G FL    +L P  +  +I+++ +G +      L  + +   G         IINIS+T
Sbjct: 97  FGKFL----ELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGD--------IINISST 144

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159
                       SA+K  V  +T SL  E    + IRV  + P
Sbjct: 145 AGQKGAAVTSAYSASKFGVLGLTESLMQEV-RKHNIRVTALTP 186

Length = 239

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 18/205 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA------GNFL 61
           L +    L +LG+  I    DV        ++++    +G++D LVN A       G+ L
Sbjct: 40  LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               DL+P  F  V+ I+  G F +     K +      +        I+ +S+      
Sbjct: 100 ----DLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPH--RSIVFVSSVNAIMV 153

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSK 179
           +  +     +KA +    +  A     +  I V  + PG IK   TA V+      I   
Sbjct: 154 SPNRGEYCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKG 212

Query: 180 ATDYMAAYKFGEKWDIAMAALYLAS 204
                   ++GE  D+A A   LAS
Sbjct: 213 LV---PMPRWGEPEDVARAVAALAS 234

Length = 256

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 55.4 bits (133), Expect = 2e-09
 Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 23/212 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF------GKLDILVNA 55
           GR K      +  + S G  A  +E D+   +   ++VE   N         ++DILVN 
Sbjct: 38  GRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNN 97

Query: 56  AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 115
           A        E+ +   F  ++ ++    F +  + L  L+  GR          +INIS+
Sbjct: 98  AGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGR----------VINISS 147

Query: 116 T---LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
               L +T +   I    +K A++++T  LA   G +  I VN I PG  K       L 
Sbjct: 148 AEVRLGFTGS---IAYGLSKGALNTMTLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLD 203

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
             EIR+ AT+     + G+  DIA A  +LAS
Sbjct: 204 DPEIRNFATNSSVFGRIGQVEDIADAVAFLAS 235

Length = 254

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 17/132 (12%)

Query: 33  EDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 88
           ED  ++V++ I+ FG++DILVN A      +F   +E+     +  V+ +   G+F +  
Sbjct: 73  EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEED----WDLVMRVHLKGSFKVTR 128

Query: 89  EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 148
            A  Y++K           G IIN S+       + Q + SAAK  +  ++ +LA+E G 
Sbjct: 129 AAWPYMRK--------QKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIE-GA 179

Query: 149 DYAIRVNGIAPG 160
            Y I  N IAP 
Sbjct: 180 KYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 54.9 bits (132), Expect = 3e-09
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 16/213 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L + V  L   G+ A G   DVR   +   +V + +  +G +D+LVN A  +  
Sbjct: 34  ARGEEGLATTVKELREAGVEADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGG 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +L+   +  V+E +  G F +  E    LK GG  +  +   G IINI++T     
Sbjct: 94  GATAELADELWLDVVETNLTGVFRVTKEV---LKAGGMLERGT---GRIINIASTGGKQG 147

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---------AGVSKLA 172
             +    SA+K  V   T++L LE      I VN + PG ++           A + +++
Sbjct: 148 VVHAAPYSASKHGVVGFTKALGLELART-GITVNAVCPGFVETPMAASVREHYADIWEVS 206

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
            EE   + T  +   ++    ++A    YL  D
Sbjct: 207 TEEAFDRITARVPLGRYVTPEEVAGMVAYLIGD 239

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 4e-09
 Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 15/143 (10%)

Query: 67  LSPNGFRTVIEIDSVGTFIM-CHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATW 123
           L P G    I   +V  F++   EA K ++K G        GG II++S+T  L Y    
Sbjct: 112 LKPKGLNN-IYTATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGNLVYIEN- 161

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
           Y  H   +KAAV+++ +  A E G +  IRVN ++ GPI   A  +    EE+++K  + 
Sbjct: 162 YAGH-GTSKAAVETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEEL 219

Query: 184 MAAYKFGEKWDIAMAALYLASDA 206
               + G+  D+A A L+L S+ 
Sbjct: 220 SPLNRMGQPEDLAGACLFLCSEK 242

Length = 260

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 54.1 bits (130), Expect = 5e-09
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           +    ++  G  AIG+  DV   +     ++     FG +DILV+ A    + P E+ S 
Sbjct: 46  AVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSF 105

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             ++ +  I   G F+    ALK++ K  R       GG++I + +   + A+  +    
Sbjct: 106 ADWKKMQAIHVDGAFLTTKAALKHMYKDDR-------GGVVIYMGSVHSHEASPLKSAYV 158

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            AK  +  + R LA E G  + +R + + PG ++ T  V K  PE+
Sbjct: 159 TAKHGLLGLARVLAKE-GAKHNVRSHVVCPGFVR-TPLVDKQIPEQ 202

Length = 262

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPA--IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
           GR +  L SA A L      A  +    DV    D      +    FG +D+LVN A   
Sbjct: 39  GRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQG 98

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
            +    D + + +R  +E+            L  L+         S+   I+ +++ L  
Sbjct: 99  RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRA--------SAAASIVCVNSLLAL 150

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
               + +  SAA+A + ++ +SLA E      +RVN I  G
Sbjct: 151 QPEPHMVATSAARAGLLNLVKSLATEL-APKGVRVNSILLG 190

Length = 265

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 24/198 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A+ L+ DV   +            +G +DI+VN A      P E+ +   ++  ++I + 
Sbjct: 467 AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILAT 526

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G F++  EA + +++ G        GG I+ I++     A       SAAKAA   + R 
Sbjct: 527 GYFLVAREAFRQMREQG-------LGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARC 579

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKW------- 193
           LA E G  Y IRVN + P  +   +G+     E    +A  Y + A +  E +       
Sbjct: 580 LAAE-GGTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRTLLK 636

Query: 194 ------DIAMAALYLASD 205
                 DIA A  +LAS 
Sbjct: 637 RHIFPADIAEAVFFLASS 654

Length = 676

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 28/195 (14%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSV 81
           +E D+  +E     +  +   +GK+D  VN A     ++     D+S + F   + +   
Sbjct: 60  VELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG 119

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IHVSAA 131
            +F+   +  KY KK G        GG ++NIS+           Y  T     +  +A 
Sbjct: 120 SSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAI 171

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA +  +T+ LA  +  D  IRVN ++PG I D        PE   +            +
Sbjct: 172 KAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDN------QPEAFLNAYKKCCNGKGMLD 224

Query: 192 KWDIAMAALYLASDA 206
             DI    ++L SD 
Sbjct: 225 PDDICGTLVFLLSDQ 239

Length = 256

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 12/154 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+ + G  A+  + D+       ++ +     FG+ DI +N        P  ++S   
Sbjct: 53  VAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAE 112

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  +  ++S   F    EA ++L   G+          I+ +  +L    T +    + +
Sbjct: 113 YDEMFAVNSKSAFFFIKEAGRHLNDNGK----------IVTLVTSLLGAFTPFYSAYAGS 162

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
           KA V+  TR+ + E+G    I V  + PGP+ DT
Sbjct: 163 KAPVEHFTRAASKEFG-ARGISVTAVGPGPM-DT 194

Length = 257

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 27/212 (12%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L   VA L   G P    + DV        VV+     +G +D+LVN A    L   + L
Sbjct: 35  LLELVADLRRYGYPFATYKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSL 94

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATW 123
           S   ++    +++ G F +       +K+   G      S+++    + ++A   Y    
Sbjct: 95  SDEDWQATFAVNTFGVFNVSQAVSPRMKRRRSGAIVTVGSNAANVPRMGMAA---Y---- 147

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKAT 181
                +A+KAA+  +T+ L LE    Y IR N ++PG   DT    +L  +E   +    
Sbjct: 148 -----AASKAALTMLTKCLGLELA-PYGIRCNVVSPGS-TDTEMQRQLWNDEYGEQQVIA 200

Query: 182 DYMAAYKFG-------EKWDIAMAALYLASDA 206
                ++ G       E  DIA A L+LASD 
Sbjct: 201 GSPEQFRLGIPLGKIAEPSDIANAVLFLASDL 232

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 51.6 bits (123), Expect = 4e-08
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 15/208 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L      + + G   + +  DV + +    +++      G +DI V  A    +
Sbjct: 40  ARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITV 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA---SSSSGGIIINISATLH 118
            P  D+    F+ +   +  G F+    A K + K G+G     ++S  G IIN+   + 
Sbjct: 100 TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVS 159

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                   H  A+KAAV  +T+++A+E    + IRVN ++PG I  T  V      E + 
Sbjct: 160 --------HYCASKAAVIHLTKAMAVELAP-HKIRVNSVSPGYIL-TELVEPYT--EYQP 207

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
                +   + G   ++A   LYLAS+A
Sbjct: 208 LWEPKIPLGRLGRPEELAGLYLYLASEA 235

Length = 253

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 29/205 (14%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           AVAA  SLG  A  +  D+       R V + +  FG++DILVN A   +L      S  
Sbjct: 45  AVAA--SLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLAC-TYLDDGLASSRA 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN---ISATLHYTATW-YQI 126
            +   ++++ V   ++   A  +L +G         GG I+N   ISA    T  W Y  
Sbjct: 102 DWLAALDVNLVSAAMLAQAAHPHLARG---------GGAIVNFTSISAKFAQTGRWLY-- 150

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDT-AGVSKLAPEEIRSKAT 181
              A+KAA+  +TRS+A++   D  IRVN ++PG     + D  +G  +   + +   A 
Sbjct: 151 --PASKAAIRQLTRSMAMDLAPD-GIRVNSVSPGWTWSRVMDELSGGDRAKADRV---AA 204

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
            +    + G+  ++A    +L SDA
Sbjct: 205 PFHLLGRVGDPEEVAQVVAFLCSDA 229

Length = 261

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 51.6 bits (123), Expect = 5e-08
 Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 17/160 (10%)

Query: 48  KLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 104
           K DIL+N A    G F+   E+ +   F  ++ +++   F +  +AL  L+   R     
Sbjct: 88  KFDILINNAGIGPGAFI---EETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSR----- 139

Query: 105 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
                IINIS+     +    I  S  K A++++T +LA + G    I VN I PG IK 
Sbjct: 140 -----IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGAR-GITVNAILPGFIKT 193

Query: 165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
                 L+   ++  AT   A  + GE  DIA  A +LAS
Sbjct: 194 DMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS 233

Length = 252

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 21/137 (15%)

Query: 37  RVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
            V ES    FG +DILV++ A    V  P  + S  G+   I   S     +       +
Sbjct: 109 EVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM 168

Query: 95  KKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTD 149
             GG               S +L Y A+      Y   +S+AKAA++S TR LA E G  
Sbjct: 169 NPGGA--------------SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 214

Query: 150 YAIRVNGIAPGPIKDTA 166
           Y IRVN I+ GP+   A
Sbjct: 215 YKIRVNTISAGPLGSRA 231

Length = 303

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 6e-08
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 11/180 (6%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+         + +     G +D+LV  A         D +P  +R    ++    + +C
Sbjct: 57  DLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY-LC 115

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
            EA+              S G ++NI  +++  A       SAAKA +   T+ LA+E+G
Sbjct: 116 VEAV-------LEGMLKRSRGAVVNI-GSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYG 167

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
             + IR N +APG +K  A  +++A   ++  +   +     F    D+A A L+LAS A
Sbjct: 168 R-FGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPA 226

Length = 257

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 50.9 bits (122), Expect = 8e-08
 Identities = 51/177 (28%), Positives = 73/177 (41%), Gaps = 35/177 (19%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
           GR +  +R     L+    P++ L  DV+         E+    +GKLDILV+  A    
Sbjct: 45  GRFEKKVRELTEPLN----PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGK 100

Query: 58  ----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 113
               G+F       S  GF   +EI +     +C  A   + +GG          I+   
Sbjct: 101 EELIGDF----SATSREGFARALEISAYSLAPLCKAAKPLMSEGG---------SIV--- 144

Query: 114 SATLHYTATWYQIH----VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
             TL Y      I     +  AKAA+++  R LA E G    IRVN I+ GPI+  A
Sbjct: 145 --TLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPK-NIRVNAISAGPIRTLA 198

Length = 258

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           LE DV         V+  I   G++D+LVN A       AE+ S    + + + +  G  
Sbjct: 50  LELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGIL 109

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            M    L +++  G G+        IINIS+ L +    Y    +A+K AV+  + SL  
Sbjct: 110 RMTRAVLPHMRAQGSGR--------IINISSVLGFLPAPYMALYAASKHAVEGYSESLDH 161

Query: 145 EWGTDYAIRVNGIAPGPIK 163
           E    + IRV+ + P   K
Sbjct: 162 EVRQ-FGIRVSLVEPAYTK 179

Length = 270

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 48  KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 107
           + D++V+ AA        DL+ +     I  + VGT  +   A + +K    G+      
Sbjct: 31  RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGR------ 84

Query: 108 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167
              I IS+             +A+KAA+D + +  A E G    +    +A G    +  
Sbjct: 85  --FILISSVAGLFGAPGLGGYAASKAALDGLAQQWASE-GWGNGLPATAVACGTWAGSGM 141

Query: 168 VS-KLAPEEIRSK 179
               +APEEI   
Sbjct: 142 AKGPVAPEEILGN 154

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 50.3 bits (120), Expect = 1e-07
 Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 14/149 (9%)

Query: 45  HFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103
           ++ +LD +L NA     + P  + +P  ++ V +++   TF++    L  L K       
Sbjct: 81  NYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQALLPLLLK------- 133

Query: 104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
            S  G ++  S+++           + +K A + + + LA E+     +RVN I PG   
Sbjct: 134 -SDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEY-QQRNLRVNCINPGGT- 190

Query: 164 DTAGVSKLAPEE---IRSKATDYMAAYKF 189
            TA  +   P E         D M  Y +
Sbjct: 191 RTAMRASAFPTEDPQKLKTPADIMPLYLW 219

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 49.4 bits (118), Expect = 2e-07
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 8/159 (5%)

Query: 16  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 75
              G  A G   D    +  + + +     F ++D+LV +A         D     F   
Sbjct: 48  AEYGEKAYGFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRS 107

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           ++++ VG F+   E  K + + G         G II I++      + +    SAAK   
Sbjct: 108 LQVNLVGYFLCAREFSKLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGG 160

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
             +T+SLAL+   ++ I VN +  G +  +     L P+
Sbjct: 161 VGLTQSLALDLA-EHGITVNSLMLGNLLKSPMFQSLLPQ 198

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 20/174 (11%)

Query: 39  VESTINHFGKLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK 95
           +E   +    +DIL N A    L    P  D S   ++ + + +   TF++    L  + 
Sbjct: 58  LEPLFDWVPSVDILCNTAG--ILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQML 115

Query: 96  KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA---I 152
           +   G        IIIN+ +   + A       +A+K A+   T+ LAL    DYA   I
Sbjct: 116 ERKSG--------IIINMCSIASFVAGGGGAAYTASKHALAGFTKQLAL----DYAKDGI 163

Query: 153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           +V GIAPG +K     +   P  +           ++ E  ++A   L+LAS  
Sbjct: 164 QVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGK 217

Length = 235

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 62/234 (26%)

Query: 6   TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN------AAAGN 59
            V+ +A +    L      +  D+   E    V  + +   G +DILV+      A AG 
Sbjct: 35  RVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGG 94

Query: 60  FLVPAED-----LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
           F    ++     L+ N    V  +D              L  G   + S    G+II+++
Sbjct: 95  FAALTDEEWQDELNLNLLAAV-RLDRA------------LLPGMIARGS----GVIIHVT 137

Query: 115 ----------ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
                     +T  Y         +AAKAA+ + ++SL+ E      +RVN ++PG I+ 
Sbjct: 138 SIQRRLPLPESTTAY---------AAAKAALSTYSKSLSKEVAPK-GVRVNTVSPGWIET 187

Query: 165 TAGVSKLAPEEIRSKATDYMAAYK-------------FGEKWDIAMAALYLASD 205
            A V+ LA     +  TDY  A +               E  ++A    +LASD
Sbjct: 188 EAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASD 240

Length = 260

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 18/212 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
                     VA + + G  AI  + D+ +  D   +++     FG+LD LVN A     
Sbjct: 33  LPDDDQATEVVAEVLAAGRRAIYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVR 92

Query: 58  --GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE-ALKYLKKGGRGQASSSSGGIIINIS 114
             G+ L    DL+ + F  +I I+  G F +    A + +++  R      S   II ++
Sbjct: 93  PRGDLL----DLTEDSFDRLIAINLRGPFFLTQAVARRMVEQPDRFDGPHRS---IIFVT 145

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
           +   Y  +  +     +KA +   TR LA     D  I V+ I PG I     ++    E
Sbjct: 146 SINAYLVSPNRGEYCISKAGLSMATRLLAYRLA-DEGIAVHEIRPGLIH--TDMTAPVKE 202

Query: 175 EIRSKATDYMAAY-KFGEKWDIAMAALYLASD 205
           +        +    ++G+  DIA A   LAS 
Sbjct: 203 KYDELIAAGLVPIRRWGQPEDIAKAVRTLASG 234

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 29/190 (15%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 80
           DVR+      V       +G+LD L+++ A     P EDL       S  GF   +++ S
Sbjct: 68  DVREPGQLEAVFARIAEEWGRLDFLLHSIA---FAPKEDLHGRVVDCSREGFALAMDV-S 123

Query: 81  VGTFI-MCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVDS 137
             +FI M   A   +  GG     S  G   ++ N           Y + +   KAA++S
Sbjct: 124 CHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-----------YNL-MGPVKAALES 171

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIA 196
             R LA E G    IRV+ I+PGP+K T   S +   + +   A +     +  +  D+ 
Sbjct: 172 SVRYLAAELG-PKGIRVHAISPGPLK-TRAASGIDDFDALLEDAAERAPLRRLVDIDDVG 229

Query: 197 MAALYLASDA 206
             A +LASDA
Sbjct: 230 AVAAFLASDA 239

Length = 258

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 12/136 (8%)

Query: 27  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           GDV   E A  V+E        +D LV    G      E+ S  G   ++          
Sbjct: 60  GDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFS--GLEEMLTNHIKIPLYA 117

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
            + +L++LK+G      SS  GI         Y A+  Q+  + AKA +      LA E 
Sbjct: 118 VNASLRFLKEGSSIVLVSSMSGI---------YKASPDQLSYAVAKAGLAKAVEILASEL 168

Query: 147 GTDYAIRVNGIAPGPI 162
                IRVNGIAP  I
Sbjct: 169 -LGRGIRVNGIAPTTI 183

Length = 238

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 45/169 (26%), Positives = 65/169 (38%), Gaps = 16/169 (9%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R    R+   ALH     A+    DV   +    VV      FG +D+LVN A       
Sbjct: 36  RSEAARADFEALH--PDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGA 93

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTA 121
            E+      R   E++  G   M    L  ++   RG     +S GG+I       +Y  
Sbjct: 94  IEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-PGIGYYCG 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVS 169
           +         K A++ I+ SLA E    + I V  + PG  + D AG S
Sbjct: 153 S---------KFALEGISESLAKEVA-PFGIHVTAVEPGSFRTDWAGRS 191

Length = 277

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 17/157 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN----AAAGNFLVP 63
               +  L   G        DVR       + ++    +G +D++VN    A+ G F   
Sbjct: 37  GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFF--- 93

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            E+LS   +   I I+ +G    C   L   K+   G+        I+NI++        
Sbjct: 94  -EELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGR--------IVNIASMAGLMQGP 144

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                + AKA V +++ +L +E   D  I V+ + P 
Sbjct: 145 AMSSYNVAKAGVVALSETLLVEL-ADDEIGVHVVCPS 180

Length = 270

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 21/137 (15%)

Query: 38  VVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK 95
           V E     FG +DILV++ A +  +  P  + S  G+   +   S     +       + 
Sbjct: 109 VAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMN 168

Query: 96  KGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDY 150
            GG               + +L Y A+      Y   +S+AKAA++S T+ LA E G  +
Sbjct: 169 PGGS--------------TISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRW 214

Query: 151 AIRVNGIAPGPIKDTAG 167
            IRVN I+ GP+   AG
Sbjct: 215 GIRVNTISAGPLASRAG 231

Length = 299

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 48.1 bits (115), Expect = 4e-07
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 16/148 (10%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D R  EDA  +V++  + FG++D+LV+ A         + S         I+ +    + 
Sbjct: 53  DARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELT 112

Query: 88  HEALKYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
              L  L++ G G+    +S SG  ++  +A             SA+K A+ ++  +L  
Sbjct: 113 RALLPALREAGSGRVVFLNSLSGKRVLAGNAGY-----------SASKFALRALAHALRQ 161

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
           E G D+ +RV+ + PG + DT     L 
Sbjct: 162 E-GWDHGVRVSAVCPGFV-DTPMAQGLT 187

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 10/169 (5%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
             +  + + G  A+ + GD+ +R  A  +V + +   G LDI+VN A         ++S 
Sbjct: 52  DVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSD 110

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG---GIIINISATLHYTATWYQI 126
             +  VI +   G F++   A  Y     R +A ++ G   G I+N S+         Q 
Sbjct: 111 EEWDAVIAVHLRGHFLLTRNAAAYW----RAKAKAAGGPVYGRIVNTSSEAGLVGPVGQA 166

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP-GPIKDTAGVSKLAPE 174
           +  AAKA + ++T S A   G  Y +R N I P      TA V   AP+
Sbjct: 167 NYGAAKAGITALTLSAARALGR-YGVRANAICPRARTAMTADVFGDAPD 214

Length = 306

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 47.8 bits (114), Expect = 7e-07
 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 9/148 (6%)

Query: 1   MGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
             RR+  L +  V  +   G  A  +  D R  ++ + + +      G L++LV  A  N
Sbjct: 29  AARREAKLEALLVDIIRDAGGSAKAVPTDARDEDEVIALFDLIEEEIGPLEVLVYNAGAN 88

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
              P  + +P  F  V E+ + G F+   EA K +   GRG         II   AT   
Sbjct: 89  VWFPILETTPRVFEKVWEMAAFGGFLAAREAAKRMLARGRGT--------IIFTGATASL 140

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWG 147
                    + AK A+ ++ +S+A E G
Sbjct: 141 RGRAGFAAFAGAKFALRALAQSMARELG 168

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.8 bits (114), Expect = 9e-07
 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 14/181 (7%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           +E D+ +     RV  +     G   IL+N AA +     E+L+         ++   T 
Sbjct: 72  MEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATM 131

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++     K        Q    +GG IIN+++         ++  +A K A+++ T+SLA 
Sbjct: 132 LLSSAFAK--------QYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAP 183

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E   +  I VN + PGP  DT  ++    EE++          + GE  D A    +L S
Sbjct: 184 ELA-EKGITVNAVNPGPT-DTGWIT----EELKHHLVPKFPQGRVGEPVDAARLIAFLVS 237

Query: 205 D 205
           +
Sbjct: 238 E 238

Length = 256

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.5 bits (113), Expect = 9e-07
 Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 14/191 (7%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           L   G+    +E D+ + +    ++       G   ILVN AA +      +L+      
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDK 122

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
              ++   T ++  +  +   K         SGG IIN+++         ++  +A K A
Sbjct: 123 HYMVNVRATTLLSSQFARGFDKK--------SGGRIINMTSGQFQGPMVGELAYAATKGA 174

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           +D++T SLA E      I VN I PGP  DT  ++    EEI+          + GE  D
Sbjct: 175 IDALTSSLAAEVAH-LGITVNAINPGP-TDTGWMT----EEIKQGLLPMFPFGRIGEPKD 228

Query: 195 IAMAALYLASD 205
            A    +LAS+
Sbjct: 229 AARLIKFLASE 239

Length = 256

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 46/167 (27%), Positives = 63/167 (37%), Gaps = 19/167 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            RR   L    A L +          DV   E    V+       G LD+++ NA  G  
Sbjct: 29  ARRTDRLDELKAELLNPNPSVEVEILDVTDEERNQLVIAELEAELGGLDLVIINAGVG-K 87

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY- 119
                DLS   FR  I+ + +G   +   AL   +  GRG         ++ IS+     
Sbjct: 88  GTSLGDLSFKAFRETIDTNLLGAAAILEAALPQFRAKGRGH--------LVLISSVAALR 139

Query: 120 ---TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
               A  Y    SA+KAA+ S+  SL  +      IRV  I PG I 
Sbjct: 140 GLPGAAAY----SASKAALSSLAESLRYDV-KKRGIRVTVINPGFID 181

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 27/192 (14%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV       +V +  +   G LD+LVNAA    +   + LS   ++    +++ G F + 
Sbjct: 56  DVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLF 115

Query: 88  HEALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 143
              +   ++   G      S+++    I ++A   Y          A+KAA+ S+ + + 
Sbjct: 116 RAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAA---Y---------GASKAALTSLAKCVG 163

Query: 144 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFG-------EKWD 194
           LE    Y +R N ++PG   DT     L  +E   +     +   +K G          +
Sbjct: 164 LELA-PYGVRCNVVSPGS-TDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQE 221

Query: 195 IAMAALYLASDA 206
           IA A L+LASD 
Sbjct: 222 IANAVLFLASDL 233

Length = 252

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 17/143 (11%)

Query: 28  DVRKRED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DV  R   A  + +      G+LD L N A      P ED+       +++I+  G    
Sbjct: 55  DVTDRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNG 114

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLA 143
            + AL YLK         + G  +IN +++   +A + Q  +   SA K AV  +T +L 
Sbjct: 115 AYAALPYLKA--------TPGARVINTASS---SAIYGQPDLAVYSATKFAVRGLTEALD 163

Query: 144 LEWGTDYAIRVNGIAPGPIKDTA 166
           +EW   + IRV  + P  + DT 
Sbjct: 164 VEW-ARHGIRVADVWPWFV-DTP 184

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 28/178 (15%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
           GRR+  L  A   L ++      +  DV   E    + E+ ++ +  LDIL+N A     
Sbjct: 36  GRREERLAEAKKELPNIHT----IVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRP 91

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
            +   PA DL  +   T I+ + +G   +    L +LKK  + +A+      I+N+S+ L
Sbjct: 92  IDLRDPASDL--DKADTEIDTNLIGPIRLIKAFLPHLKK--QPEAT------IVNVSSGL 141

Query: 118 HYTATWYQIH--VSAAKAAVDSITRSL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171
            +       +    A KAA+ S T +L   L+   D  + V  I P P  DT    + 
Sbjct: 142 AFVP--MAANPVYCATKAALHSYTLALRHQLK---DTGVEVVEIVP-PAVDTELHEER 193

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 15/202 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
               A + + G  A     D+  R+     V +     G +D+LVN A  +   P     
Sbjct: 41  EKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTE 100

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
           P  +  +I I+  G   M H  L  + + G G+        I+NI++      +  +   
Sbjct: 101 PPLWERLIAINLTGALHMHHAVLPGMVERGAGR--------IVNIASDAARVGSSGEAVY 152

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDY 183
           +A K  + + ++++A E    + I VN + PGP  DTA +  +      PE++R   T  
Sbjct: 153 AACKGGLVAFSKTMAREHAR-HGITVNVVCPGP-TDTALLDDICGGAENPEKLREAFTRA 210

Query: 184 MAAYKFGEKWDIAMAALYLASD 205
           +   + G+  D+  A L+ +SD
Sbjct: 211 IPLGRLGQPDDLPGAILFFSSD 232

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 13/144 (9%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G  D +V+ A      P  +L+   F+  +    +G   +    L YL          + 
Sbjct: 53  GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL----------ND 102

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           GG I   S  L           +    A++   R+ A+E      IR+N ++PG ++++ 
Sbjct: 103 GGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG--IRINAVSPGVVEESL 160

Query: 167 GVSK-LAPEEIRSKATDYMAAYKF 189
                  P      A D   AY  
Sbjct: 161 EAYGDFFPGFEPVPAEDVAKAYVR 184

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 19/143 (13%)

Query: 25  LEGDVRKR-EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           LE DV     ++   V   +     LD+L+ NA   +   PA ++       V +++ +G
Sbjct: 52  LELDVTDEIAESAEAVAERL-GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLG 110

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDS 137
             ++    L  L KG R          IINIS+       + +  WY    S  KAA++ 
Sbjct: 111 PLLLTQAFLPLLLKGAR--------AKIINISSRVGSIGDNTSGGWYSYRAS--KAALNM 160

Query: 138 ITRSLALEWGTDYAIRVNGIAPG 160
           +T+SLA+E   D  I V  + PG
Sbjct: 161 LTKSLAVELKRD-GITVVSLHPG 182

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 49/212 (23%), Positives = 83/212 (39%), Gaps = 14/212 (6%)

Query: 3   RRKTVLRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           RR   + +  A   S G P +   + D+   E  + +  +       +D+ +N A     
Sbjct: 38  RRVDKIEALAAECQSAGYPTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P       G++ + +++ +   I   EA + +K+           G IINI++   H  
Sbjct: 98  EPLLSGKTEGWKEMFDVNVLALSICTREAYQSMKERNVDD------GHIININSMSGHRV 151

Query: 121 ATWYQIHV-SAAKAAVDSITRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 H  +A K AV ++T  L  E       IR   I+PG + +T    KL   +   
Sbjct: 152 PPVSVFHFYAATKHAVTALTEGLRQELREAKTHIRATSISPGLV-ETEFAFKLHDNDPEK 210

Query: 179 KATDYMAAYKFGEKWDIAMAALYLAS--DAVQ 208
            A  Y +      + D+A A LY+ S    VQ
Sbjct: 211 AAATYESIPCLKPE-DVANAVLYVLSTPPHVQ 241

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 14/134 (10%)

Query: 38  VVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI--------DSVGTFIM 86
           ++++    FG+ D+LVN A+  +   L+  +     G +  +E+        +++  + +
Sbjct: 74  IIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFL 133

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
             +A    + G R +  S++  I+    A        + ++ + AK A++ +TRS ALE 
Sbjct: 134 I-KAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMY-TMAKHALEGLTRSAALEL 191

Query: 147 GTDYAIRVNGIAPG 160
                IRVNG+APG
Sbjct: 192 AP-LQIRVNGVAPG 204

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 50/150 (33%), Positives = 66/150 (44%), Gaps = 25/150 (16%)

Query: 26  EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 77
           E DV K E    + ES     GK+D +V++ A        G+FL    + S   F   +E
Sbjct: 61  ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFL----ETSKEAFNIAME 116

Query: 78  IDSVGTFIMCHEALK-YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 136
           I SV + I    AL   L  G      S  GG+        HY        +  AKAA++
Sbjct: 117 I-SVYSLIELTRALLPLLNDGASVLTLSYLGGV----KYVPHYNV------MGVAKAALE 165

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           S  R LA++ G    IRVN I+ GPIK  A
Sbjct: 166 SSVRYLAVDLGKK-GIRVNAISAGPIKTLA 194

Length = 274

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 45.2 bits (107), Expect = 6e-06
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 19/169 (11%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G +D LVN A        + LS   +     ++  G F +      ++K           
Sbjct: 67  GPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHMKDRR-------- 118

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
            G I+ +++   +          A+KAA+ S+++ L LE    Y +R N ++PG   DTA
Sbjct: 119 TGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELA-PYGVRCNVVSPGS-TDTA 176

Query: 167 GVSKLAPEE------IRSKATDY---MAAYKFGEKWDIAMAALYLASDA 206
               L  +E      I      +   +   K  +  DIA A L+LASD 
Sbjct: 177 MQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQ 225

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAE 65
           ++ V  + + G  A+    D+   + A  +V++ +  FG LD+LVN A       +    
Sbjct: 53  QAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIA--- 109

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           ++S   +  VI +   G F     A  Y +     +A  +    IIN S+      +  Q
Sbjct: 110 NMSEEEWDAVIAVHLKGHFATLRHAAAYWR--AESKAGRAVDARIINTSSGAGLQGSVGQ 167

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159
            + SAAKA + ++T   A E G  Y + VN IAP
Sbjct: 168 GNYSAAKAGIAALTLVAAAELGR-YGVTVNAIAP 200

Length = 286

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 15/139 (10%)

Query: 10  SAVAALHSLGIPAIGLEG--DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           +A+AA   LG     L    DV          E  +  FG +D++V NA   +       
Sbjct: 47  AALAA--ELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQ 103

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           + P+ FR VI+++ +G F      L  L             G ++ +S+   + A     
Sbjct: 104 VDPDAFRRVIDVNLLGVFHTVRATLPAL---------IERRGYVLQVSSLAAFAAAPGMA 154

Query: 127 HVSAAKAAVDSITRSLALE 145
              A+KA V++   +L LE
Sbjct: 155 AYCASKAGVEAFANALRLE 173

Length = 296

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 17/206 (8%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
             ++   S V+A+ + G  A  L+ DV  R     ++E+ I   G    +V  A      
Sbjct: 31  SGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDA 90

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEA---LKYLKKGGRGQASSSSGGIIINISATLHY 119
               LS   +  VI  +  G + + H     +   ++GGR    +S  G++ N       
Sbjct: 91  AFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG----- 145

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                Q++ SAAKA +   T++LA+E      I VN IAPG I DT  ++++  E    +
Sbjct: 146 -----QVNYSAAKAGLIGATKALAVELAKR-KITVNCIAPGLI-DTEMLAEV--EHDLDE 196

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASD 205
           A   +   + G+  ++A  A +L SD
Sbjct: 197 ALKTVPMNRMGQPAEVASLAGFLMSD 222

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 11/189 (5%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76
           +LG   I  EG+V   +      +      G++D+LVN A     V    ++   +  VI
Sbjct: 50  ALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVI 109

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 136
           + +    F +  + +  + + G G+        IINIS+       + Q + S AKA + 
Sbjct: 110 DTNLTSLFNVTKQVIDGMVERGWGR--------IINISSVNGQKGQFGQTNYSTAKAGIH 161

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
             T SLA E  T   + VN ++PG I     + K    ++  K    +   + G   +I 
Sbjct: 162 GFTMSLAQEVATK-GVTVNTVSPGYI--GTDMVKAIRPDVLEKIVATIPVRRLGSPDEIG 218

Query: 197 MAALYLASD 205
               +LAS+
Sbjct: 219 SIVAWLASE 227

Length = 246

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 19/178 (10%)

Query: 32  REDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           R++   + +        +DILVN A     G F+     +S   + +V+E++   TF + 
Sbjct: 64  RDEVKALGQKAEADLEGVDILVNNAGITKDGLFV----RMSDEDWDSVLEVNLTATFRLT 119

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
            E    + +   G+        IINI++ +  T    Q +  A+KA +   ++SLA E  
Sbjct: 120 RELTHPMMRRRYGR--------IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIA 171

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           T   + VN +APG I ++A   KL  ++ +      +   + G   ++A A  YLAS 
Sbjct: 172 TR-NVTVNCVAPGFI-ESAMTGKLNDKQ-KEAIMGAIPMKRMGTGAEVASAVAYLASS 226

Length = 245

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 21/176 (11%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           + R +  L +  A L S G+ A     D+   E     +   +  FG  D+L+N A   +
Sbjct: 36  VARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAY 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  ++  + ++ VI+++    F  C   L  ++  G        GG+IIN+S+     
Sbjct: 96  TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--------GGLIINVSSIAARN 147

Query: 121 A--TW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGV 168
           A   W  Y      +KAA+ + T+ LA E    + IRV  I  G    P+ DT  V
Sbjct: 148 AFPQWGAY----CVSKAALAAFTKCLAEE-ERSHGIRVCTITLGAVNTPLWDTETV 198

Length = 241

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           L+ DV   +     VE        +D+LV  A    L P E LS +   +V +++  GT 
Sbjct: 58  LQLDVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTV 115

Query: 85  IMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 142
            M    L  +K+ G G+   +SS GG+       L +   +      A+K A++ +  SL
Sbjct: 116 RMLQAFLPDMKRRGSGRILVTSSVGGL-----QGLPFNDVY-----CASKFALEGLCESL 165

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATD 182
           A++    + + ++ I  GP+  TA + K+  +PEE+  +  D
Sbjct: 166 AVQL-LPFNVHLSLIECGPVH-TAFMEKVLGSPEEVLDRTAD 205

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 25/211 (11%)

Query: 2   GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---A 57
           GRR   L+     L +   +  + L+ DV  RE     +E+    F  +DILVN A    
Sbjct: 31  GRRAERLQELADELGAKFPVKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLAL 90

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
           G  L PA++     + T+I+ +  G   +    L  +    +G         IIN+ +  
Sbjct: 91  G--LDPAQEADLEDWETMIDTNVKGLLNVTRLILPIMIARNQGH--------IINLGSIA 140

Query: 118 -HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
             Y      ++  A KAAV   + +L  +      IRV  I PG ++    + +   ++ 
Sbjct: 141 GRYPYAGGNVY-CATKAAVRQFSLNLRKDL-IGTGIRVTNIEPGLVETEFSLVRFHGDKE 198

Query: 177 RSKATDYMAAYKFGEKW---DIAMAALYLAS 204
           ++        Y+  E     DIA   L++AS
Sbjct: 199 KADKV-----YEGVEPLTPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 21/166 (12%)

Query: 27  GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85
            D+       +++E+     G+ D+L+ NA +   +   E +  +  +   +++      
Sbjct: 56  ADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVC 115

Query: 86  MCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLA 143
           +    L+  KK             ++N+S  A ++    W      ++KAA D   R LA
Sbjct: 116 LTSTLLRAFKK-------RGLKKTVVNVSSGAAVNPFKGW--GLYCSSKAARDMFFRVLA 166

Query: 144 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
            E   +  +RV   APG + DT         EIR  + D     +F
Sbjct: 167 AE---EPDVRVLSYAPGVV-DTDMQR-----EIRETSADPETRSRF 203

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 11/103 (10%)

Query: 108 GIIINI-SATLH--YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
           G I+NI S  +      T Y    SAAK+A+   TR+ ALE    Y I VN +APGPI +
Sbjct: 120 GRIVNICSRAIFGALDRTSY----SAAKSALVGCTRTWALELAE-YGITVNAVAPGPI-E 173

Query: 165 TAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           T    +  P   E   +    +   + G   ++A A  +L SD
Sbjct: 174 TELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSD 216

Length = 234

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN-FLVPAEDLSPNGFRTV 75
           LG  A  +  DV         V   +  FG+LD LV NAA  +      E LS   +  V
Sbjct: 54  LGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRV 113

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           + ++  G  ++      YL+         +  G I+N+++T    +       +A+K  +
Sbjct: 114 LAVNLTGPMLLAKHCAPYLR---------AHNGAIVNLASTRARQSEPDTEAYAASKGGL 164

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPI 162
            ++T +LA+  G +  IRVN ++PG I
Sbjct: 165 LALTHALAISLGPE--IRVNAVSPGWI 189

Length = 255

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 33  EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 91
           +    +V++ +   G +D+LV N      + P +  S    R   E  S+  F +   A+
Sbjct: 57  QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAI 116

Query: 92  KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 151
             +KK G        G II   SA       +  ++   A+AA  ++  SLA E      
Sbjct: 117 AQMKKAG-------GGSIIFITSAVPKKPLAYNSLY-GPARAAAVALAESLAKELS-RDN 167

Query: 152 IRVNGIAP 159
           I V  I P
Sbjct: 168 ILVYAIGP 175

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVS-KLAPEEIRSKATDYM 184
           + +K A+   TR  A  W     +RVN +APGP++     A +      E + +  T   
Sbjct: 152 AGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMG 211

Query: 185 AAYKFGEKWDIAMAALYLASDAVQ 208
                 E  +IA    +LASDA  
Sbjct: 212 RR---AEPDEIAPVIAFLASDAAS 232

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 17/168 (10%)

Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98
           V   +   G LDILV  A       A +L  +    + +I+    +    EA + + +GG
Sbjct: 66  VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGG 125

Query: 99  RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158
           R     S  G  + ++    Y A+         K+A+  + R LA ++G    I +N + 
Sbjct: 126 RIIIIGSVNGDRMPVAGMAAYAAS---------KSALQGMARGLARDFG-PRGITINVVQ 175

Query: 159 PGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLAS 204
           PGPI DT       P     K     +MA  + G   ++A    +LA 
Sbjct: 176 PGPI-DT----DANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAG 218

Length = 237

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 50  DILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 107
            ILVN    +  +P    +   +  + +I ++ + T  M    L  + K  +G       
Sbjct: 80  GILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLILPGMVKRKKG------- 132

Query: 108 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
             I+NIS+      T      SA+KA +D  +R+L  E
Sbjct: 133 -AIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEE 169

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 19/156 (12%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           +  L SLG+  + L  DV         V++ I   G++D+LVN A        ED+  + 
Sbjct: 40  MEDLASLGVHPLSL--DVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDE 97

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT----LHYTATWYQIH 127
            R   E++  G   +    L +++    G+        IINIS+           WY   
Sbjct: 98  ARRQFEVNLFGAARLTQLVLPHMRAQRSGR--------IINISSMGGKIYTPLGAWYH-- 147

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
             A K A++  + +L LE    + I V  I PG IK
Sbjct: 148 --ATKFALEGFSDALRLEVA-PFGIDVVVIEPGGIK 180

Length = 273

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 27/149 (18%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
           L  DV   E+     E+     G +  + +  A        G FL    + S +GF    
Sbjct: 64  LPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFL----ETSRDGFLLAQ 119

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAA 134
            I +     +  EA K + +GG     +  GG  ++ N           Y + +  AKA+
Sbjct: 120 NISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN-----------YNV-MGVAKAS 167

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIK 163
           +++  + LA + G D  IRVN I+ GPI+
Sbjct: 168 LEASVKYLANDLGKD-GIRVNAISAGPIR 195

Length = 257

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 27/138 (19%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIE------IDSVGTFIMCHEALKYLKKGGRG 100
           GKLD +V+ A   +      LSP  F+TV E      I++V    +       LK+    
Sbjct: 86  GKLDGIVHCAGYFYA-----LSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ---- 136

Query: 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
             S  +  I +  S      A W      A+KAA++ + +  A EW     +R N + PG
Sbjct: 137 --SPDASVIFVGESHGETPKAYWGGF--GASKAALNYLCKVAADEWERFGNLRANVLVPG 192

Query: 161 PIKDTAGVSKLAPEEIRS 178
           PI         +P+ I+S
Sbjct: 193 PIN--------SPQRIKS 202

Length = 239

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 48/175 (27%), Positives = 68/175 (38%), Gaps = 33/175 (18%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF- 60
           GRR+  L+        LG      + DVR R     ++ S    +  +D+LVN A     
Sbjct: 31  GRRQERLQELKD---ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALG 87

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           L PA   S   + T+I+ ++ G   M    L  + +   G         IINI +T    
Sbjct: 88  LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGH--------IINIGST---A 136

Query: 121 ATW-------YQIHVSAAKAAVDSITRSLALEWGTDY---AIRVNGIAPGPIKDT 165
            +W       Y     A KA V    R  +L   TD    A+RV  I PG +  T
Sbjct: 137 GSWPYAGGNVY----GATKAFV----RQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183

Length = 248

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 29/150 (19%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEID 79
           DV        V E+    +GKLD +V+A          G ++    D S + F   ++I 
Sbjct: 68  DVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYV----DTSRDNFTMTMDI- 122

Query: 80  SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH---VSAAKAAVD 136
           SV +F    +         R +   + GG I+ ++   +Y A     H   +  AKAA++
Sbjct: 123 SVYSFTAVAQ---------RAEKLMTDGGSILTLT---YYGAEKVMPHYNVMGVAKAALE 170

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +  + LA++ G    IRVN I+ GPIK  A
Sbjct: 171 ASVKYLAVDLGPK-NIRVNAISAGPIKTLA 199

Length = 272

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           AKAA++S  R LA + G    IRVN +A GPI+  A
Sbjct: 161 AKAALESTNRYLARDLGPR-GIRVNLVAAGPIRTLA 195

Length = 256

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 9/80 (11%)

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-- 185
             A  AA++++ R LALE      +RVN ++PG + DT   SKLA +  R       A  
Sbjct: 137 QGAINAALEALARGLALELA---PVRVNTVSPGLV-DTPLWSKLAGDA-REAMFAAAAER 191

Query: 186 --AYKFGEKWDIAMAALYLA 203
             A + G+  D+A A L+LA
Sbjct: 192 LPARRVGQPEDVANAILFLA 211

Length = 230

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 27/152 (17%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEI 78
           +E DV   E   R   +     GK+D +V+A A  +    E      D S +G+    +I
Sbjct: 60  VECDVASDESIERAFATIKERVGKIDGIVHAIA--YAKKEELGGNVTDTSRDGYALAQDI 117

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAA 134
            +     +   A   L  G           I+     TL Y  +   I     +  AKAA
Sbjct: 118 SAYSLIAVAKYARPLLNPGA---------SIV-----TLTYFGSERAIPNYNVMGIAKAA 163

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           ++S  R LA + G    IRVN I+ G +K  A
Sbjct: 164 LESSVRYLARDLG-KKGIRVNAISAGAVKTLA 194

Length = 252

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 12/175 (6%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           RR       V  + + G  A+    DV   +     V       G++++LV+ A   +  
Sbjct: 42  RRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFG 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
              ++S   F + ++I  VG   +    L        G      G +I   S        
Sbjct: 102 KLHEISTEQFESQVQIHLVGANRLATAVLP-------GMIERRRGDLIFVGSDVALRQRP 154

Query: 123 WYQIHVSAAKAAVDSITRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
               +  AAKA ++++  +L +E  GT   +R + + PGP     G S L  E I
Sbjct: 155 HMGAYG-AAKAGLEAMVTNLQMELEGT--GVRASIVHPGPTLTGMGWS-LPAEVI 205

Length = 274

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 39/199 (19%), Positives = 70/199 (35%), Gaps = 20/199 (10%)

Query: 2   GRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAG- 58
           GR     L      + + G   I +  D    ++   + E       G+LDILVN A   
Sbjct: 34  GRTILPQLPGTAEEIEARGGKCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAA 93

Query: 59  ------NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
                     P  +  P  +  +  +     +     A   + K G+G         I+ 
Sbjct: 94  VQLILVGVAKPFWEEPPTIWDDINNVGLRAHYACSVYAAPLMVKAGKGL--------IVI 145

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
           IS +       + +     KAA+D +   +A E    + + V  + PG ++ T  V ++ 
Sbjct: 146 IS-STGGLEYLFNVAYGVGKAAIDRMAADMAHEL-KPHGVAVVSLWPGFVR-TELVLEMP 202

Query: 173 PEEIRSKATDYMAAYKFGE 191
            ++  S       A+  GE
Sbjct: 203 EDDEGSWHAKERDAFLNGE 221

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)

Query: 28  DVRKREDAVRVVESTINHFGKLDI--LVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           DV K E   R  +    H G+  +  LVN A    F    E L  + +R  +E++  GT 
Sbjct: 56  DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTV 115

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +    L  L++         + G ++N+S+              A+KAAV++ + SL  
Sbjct: 116 EVTKAFLPLLRR---------AKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRR 166

Query: 145 E---WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
           E   WG    ++V+ I PG  K   G++  +    +  
Sbjct: 167 ELQPWG----VKVSIIEPGNFK--TGITGNSELWEKQA 198

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 34  DAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 92
            AVR VV+      G++D++V+ A       AE+LS    R  I+ + +G+  +   AL 
Sbjct: 61  AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALP 120

Query: 93  YLKK--GGRGQASSSSGGIIINISATLHYTATW 123
           +L++  GGR    SS GG I     +L++   W
Sbjct: 121 HLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKW 153

Length = 276

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	99.98
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.98
PRK07814	263	short chain dehydrogenase; Provisional	99.98
PRK08862	227	short chain dehydrogenase; Provisional	99.98
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.97
PLN02253	280	xanthoxin dehydrogenase	99.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.97
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12937	245	short chain dehydrogenase; Provisional	99.97
PRK06841	255	short chain dehydrogenase; Provisional	99.97
PRK07109	334	short chain dehydrogenase; Provisional	99.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.97
PRK05876	275	short chain dehydrogenase; Provisional	99.97
PRK07890	258	short chain dehydrogenase; Provisional	99.97
PRK05855	582	short chain dehydrogenase; Validated	99.97
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK06123	248	short chain dehydrogenase; Provisional	99.97
PRK08278	273	short chain dehydrogenase; Provisional	99.97
PRK06484	520	short chain dehydrogenase; Validated	99.97
PRK12939	250	short chain dehydrogenase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.97
PRK06701	290	short chain dehydrogenase; Provisional	99.97
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.97
PRK07069	251	short chain dehydrogenase; Validated	99.97
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.97
PRK06500	249	short chain dehydrogenase; Provisional	99.97
PRK05650	270	short chain dehydrogenase; Provisional	99.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.97
PRK08628	258	short chain dehydrogenase; Provisional	99.97
PRK05717	255	oxidoreductase; Validated	99.97
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.97
PRK12744	257	short chain dehydrogenase; Provisional	99.97
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.97
PRK06483	236	dihydromonapterin reductase; Provisional	99.97
PRK07454	241	short chain dehydrogenase; Provisional	99.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06182	273	short chain dehydrogenase; Validated	99.97
PRK06523	260	short chain dehydrogenase; Provisional	99.97
PRK05875	276	short chain dehydrogenase; Provisional	99.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08263	275	short chain dehydrogenase; Provisional	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
PRK07832	272	short chain dehydrogenase; Provisional	99.97
PRK07825	273	short chain dehydrogenase; Provisional	99.97
PRK06138	252	short chain dehydrogenase; Provisional	99.97
PRK09186	256	flagellin modification protein A; Provisional	99.96
PRK06180	277	short chain dehydrogenase; Provisional	99.96
PRK12742	237	oxidoreductase; Provisional	99.96
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.96
PRK06057	255	short chain dehydrogenase; Provisional	99.96
PRK08703	239	short chain dehydrogenase; Provisional	99.96
PRK10538	248	malonic semialdehyde reductase; Provisional	99.96
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.96
PRK05884	223	short chain dehydrogenase; Provisional	99.96
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07024	257	short chain dehydrogenase; Provisional	99.96
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09134	258	short chain dehydrogenase; Provisional	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.96
PRK07774	250	short chain dehydrogenase; Provisional	99.96
PRK12827	249	short chain dehydrogenase; Provisional	99.96
PLN02780	320	ketoreductase/ oxidoreductase	99.96
PRK05993	277	short chain dehydrogenase; Provisional	99.96
PRK05866	293	short chain dehydrogenase; Provisional	99.96
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.96
PRK07775	274	short chain dehydrogenase; Provisional	99.96
PRK08267	260	short chain dehydrogenase; Provisional	99.96
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.96
PRK06196	315	oxidoreductase; Provisional	99.96
PRK07074	257	short chain dehydrogenase; Provisional	99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
PRK07904	253	short chain dehydrogenase; Provisional	99.96
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.96
PRK06179	270	short chain dehydrogenase; Provisional	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.96
PRK06914	280	short chain dehydrogenase; Provisional	99.96
PRK06181	263	short chain dehydrogenase; Provisional	99.95
PRK09072	263	short chain dehydrogenase; Provisional	99.95
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.95
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.95
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.95
PRK06194	287	hypothetical protein; Provisional	99.95
PRK07060	245	short chain dehydrogenase; Provisional	99.95
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.95
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK08251	248	short chain dehydrogenase; Provisional	99.95
PRK08324	681	short chain dehydrogenase; Validated	99.95
PRK05854	313	short chain dehydrogenase; Provisional	99.95
PRK07577	234	short chain dehydrogenase; Provisional	99.95
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.95
PRK07578	199	short chain dehydrogenase; Provisional	99.95
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.95
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.94
PRK07102	243	short chain dehydrogenase; Provisional	99.94
PRK05693	274	short chain dehydrogenase; Provisional	99.94
PRK06482	276	short chain dehydrogenase; Provisional	99.94
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.94
PRK06924	251	short chain dehydrogenase; Provisional	99.94
PRK07201	657	short chain dehydrogenase; Provisional	99.94
PRK12829	264	short chain dehydrogenase; Provisional	99.94
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.94
PRK07326	237	short chain dehydrogenase; Provisional	99.94
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.94
PRK07023	243	short chain dehydrogenase; Provisional	99.94
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.94
PRK09135	249	pteridine reductase; Provisional	99.93
PRK12828	239	short chain dehydrogenase; Provisional	99.93
PRK06197	306	short chain dehydrogenase; Provisional	99.93
COG1028	251	FabG Dehydrogenases with different specificities (	99.93
KOG1208	314	consensus Dehydrogenases with different specificit	99.93
PRK07806	248	short chain dehydrogenase; Provisional	99.93
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.93
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.92
PRK06101	240	short chain dehydrogenase; Provisional	99.92
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.92
PRK08017	256	oxidoreductase; Provisional	99.92
PRK09291	257	short chain dehydrogenase; Provisional	99.91
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.91
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK08264	238	short chain dehydrogenase; Validated	99.9
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK08177	225	short chain dehydrogenase; Provisional	99.89
PRK06953	222	short chain dehydrogenase; Provisional	99.87
PRK12367	245	short chain dehydrogenase; Provisional	99.84
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.84
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.78
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.78
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.76
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.7
PLN03209	576	translocon at the inner envelope of chloroplast su	99.68
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.63
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.62
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.54
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.5
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.4
PLN02650	351	dihydroflavonol-4-reductase	99.38
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.36
PRK06720	169	hypothetical protein; Provisional	99.36
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.35
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.34
PLN02214	342	cinnamoyl-CoA reductase	99.29
PLN02572	442	UDP-sulfoquinovose synthase	99.28
PLN02583	297	cinnamoyl-CoA reductase	99.27
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.27
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.26
PLN02653	340	GDP-mannose 4,6-dehydratase	99.25
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.24
PLN00198	338	anthocyanidin reductase; Provisional	99.22
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.22
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.19
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.12
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.08
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.05
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.05
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.03
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.03
PLN02686	367	cinnamoyl-CoA reductase	98.99
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.96
PLN02240	352	UDP-glucose 4-epimerase	98.95
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.95
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.93
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.93
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.93
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.92
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.9
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.89
PLN02427	386	UDP-apiose/xylose synthase	98.88
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.87
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.82
PLN02260	668	probable rhamnose biosynthetic enzyme	98.79
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.71
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.68
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.67
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.65
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.56
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.55
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.54
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.5
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.48
PLN02778	298	3,5-epimerase/4-reductase	98.45
PLN02996	491	fatty acyl-CoA reductase	98.4
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.39
PLN02206	442	UDP-glucuronate decarboxylase	98.37
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.31
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.26
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.26
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.25
PLN02260	668	probable rhamnose biosynthetic enzyme	98.23
PRK07201	657	short chain dehydrogenase; Provisional	98.22
CHL00194	317	ycf39 Ycf39; Provisional	98.2
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	98.19
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.16
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.11
PRK05865	854	hypothetical protein; Provisional	98.11
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.62
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.6
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.58
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.56
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	97.37
PLN02503	605	fatty acyl-CoA reductase 2	97.33
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	97.33
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.15
PRK08309	177	short chain dehydrogenase; Provisional	96.96
KOG2733	423	consensus Uncharacterized membrane protein [Functi	96.66
PRK12320	699	hypothetical protein; Provisional	96.55
PLN00016	378	RNA-binding protein; Provisional	96.44
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.43
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	95.82
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	95.82
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.2
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	95.08
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	94.55
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	94.31
PF12241	237	Enoyl_reductase: Trans-2-enoyl-CoA reductase catal	93.94
KOG2774	366	consensus NAD dependent epimerase [General functio	91.2
PRK12548	289	shikimate 5-dehydrogenase; Provisional	90.93
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	89.64
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	89.46
COG1058	255	CinA Predicted nucleotide-utilizing enzyme related	87.71
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	86.84
PLN00106	323	malate dehydrogenase	86.8
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	84.85
COG2910	211	Putative NADH-flavin reductase [General function p	83.83
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	83.06
cd00885	170	cinA Competence-damaged protein. CinA is the first	82.62
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	81.15
COG3268	382	Uncharacterized conserved protein [Function unknow	80.89

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.3e-38  Score=233.13  Aligned_cols=195  Identities=24%  Similarity=0.240  Sum_probs=172.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++|+++++++.+  ..+..+..|++|.+++..+++.+.++++++|+||||||.....++.+.+.++|+.|+++|+
T Consensus        36 ~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni  113 (246)
T COG4221          36 AARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNV  113 (246)
T ss_pred             EeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHH
Confidence            47999999999999976  5789999999999999999999999999999999999998878999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|.++.+++++|.|.+++        .|.||++||++|..++++...|+++|++..+|++.|+.|+. .++|||..|+||
T Consensus       114 ~G~l~~~~avLP~m~~r~--------~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~-g~~IRVt~I~PG  184 (246)
T COG4221         114 KGLLNGTRAVLPGMVERK--------SGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELA-GTGIRVTVISPG  184 (246)
T ss_pred             HHHHHHHHHhhhHHHhcC--------CceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhc-CCCeeEEEecCc
Confidence            999999999999999998        78999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .+.|..+........ .+.......-....+|+|+|+.+.|.++.+.
T Consensus       185 ~v~~~~~s~v~~~g~-~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~  230 (246)
T COG4221         185 LVETTEFSTVRFEGD-DERADKVYKGGTALTPEDIAEAVLFAATQPQ  230 (246)
T ss_pred             eecceecccccCCch-hhhHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence            998776655443321 1122222223347899999999999988764

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.2e-38  Score=223.97  Aligned_cols=197  Identities=24%  Similarity=0.301  Sum_probs=174.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +++....++++..|...+ +-..+.||+++.++++..+++..+.+|+++++|||||+..+..+..+..++|+..+.+|+.
T Consensus        45 dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~  123 (256)
T KOG1200|consen   45 DLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLT  123 (256)
T ss_pred             ecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhch
Confidence            355566677777775432 4567999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |.|..+|++...|...+.      ++++||++||+.+..+.-++..|+++|+++.+|+|++++|++ .+|||||.|+||+
T Consensus       124 gvfl~tqaa~r~~~~~~~------~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla-~knIrvN~VlPGF  196 (256)
T KOG1200|consen  124 GVFLVTQAAVRAMVMNQQ------QGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELA-RKNIRVNVVLPGF  196 (256)
T ss_pred             hhHHHHHHHHHHHHHhcC------CCceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHh-hcCceEeEecccc
Confidence            999999999999655432      146999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |.|||....  ++.........+|++|++.+||+|+.++||+|+.++
T Consensus       197 I~tpMT~~m--p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ss  241 (256)
T KOG1200|consen  197 IATPMTEAM--PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASS  241 (256)
T ss_pred             ccChhhhhc--CHHHHHHHHccCCccccCCHHHHHHHHHHHhccccc
Confidence            999987653  334567788899999999999999999999998763

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.3e-37  Score=233.41  Aligned_cols=192  Identities=22%  Similarity=0.193  Sum_probs=162.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~   77 (208)
                      +|+ ++.++..+++.  +.++..++||++|+++++++++++.+++|++|++|||||+..+    .++.+.+.++|+..++
T Consensus        40 ~r~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  116 (252)
T PRK06079         40 YQN-DRMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQD  116 (252)
T ss_pred             cCc-hHHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhC
Confidence            466 34444444443  2357889999999999999999999999999999999998653    5677889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.+++.+.|.|.+          +|+||+++|..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|
T Consensus       117 in~~~~~~l~~~~~~~~~~----------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~vn~i  185 (252)
T PRK06079        117 ISAYSLIAVAKYARPLLNP----------GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLG-KKGIRVNAI  185 (252)
T ss_pred             cccHHHHHHHHHHHHhccc----------CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEE
Confidence            9999999999999998853          57899999999998889999999999999999999999998 899999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++......+++..+......|++|+++|+|+|++++||+|+++
T Consensus       186 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~  235 (252)
T PRK06079        186 SAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLS  235 (252)
T ss_pred             ecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccc
Confidence            99999998654322233334445566788999999999999999999865

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=233.08  Aligned_cols=197  Identities=21%  Similarity=0.246  Sum_probs=171.8

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++... +.++..+.+|++|+++++.+++++. ++|++|++|||+|.....++.+.+.++|++++++|
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n  116 (263)
T PRK08339         38 LSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLL  116 (263)
T ss_pred             EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            368888999888888654 5578899999999999999999986 58999999999998777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|.|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+|
T Consensus       117 ~~~~~~~~~~~l~~m~~~~--------~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~-~~gIrVn~v~P  187 (263)
T PRK08339        117 LYPAVYLTRALVPAMERKG--------FGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELG-PKGITVNGIMP  187 (263)
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            9999999999999998765        68999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++....         ...++....+....|++|+++|+|+|++++||+|+.+
T Consensus       188 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~  244 (263)
T PRK08339        188 GIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLG  244 (263)
T ss_pred             CcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchh
Confidence            99999864321         1112233345566789999999999999999999865

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-36  Score=232.74  Aligned_cols=175  Identities=25%  Similarity=0.253  Sum_probs=151.4

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (208)
                      ...+++|++|.++++++++++.+++|++|++|||||....    .++.+.+.++|++++++|+.+++.++++++|+|.+ 
T Consensus        59 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-  137 (271)
T PRK06505         59 DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-  137 (271)
T ss_pred             ceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-
Confidence            4578999999999999999999999999999999998643    35678899999999999999999999999999963 


Q ss_pred             CCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHH
Q 028508           98 GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR  177 (208)
Q Consensus        98 ~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~  177 (208)
                               +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+||+++|++...........
T Consensus       138 ---------~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~  207 (271)
T PRK06505        138 ---------GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYG-PQGIRVNAISAGPVRTLAGAGIGDARAIF  207 (271)
T ss_pred             ---------CceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHh-hcCeEEEEEecCCccccccccCcchHHHH
Confidence                     58899999999988899999999999999999999999999 99999999999999998643221111122


Q ss_pred             HhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          178 SKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       178 ~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .......|++|+++|+|+|++++||+|+.+
T Consensus       208 ~~~~~~~p~~r~~~peeva~~~~fL~s~~~  237 (271)
T PRK06505        208 SYQQRNSPLRRTVTIDEVGGSALYLLSDLS  237 (271)
T ss_pred             HHHhhcCCccccCCHHHHHHHHHHHhCccc
Confidence            233445788999999999999999999865

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.8e-37  Score=234.82  Aligned_cols=196  Identities=32%  Similarity=0.406  Sum_probs=173.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCC----CCCCCCCHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL----VPAEDLSPNGFRTV   75 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~----~~~~~~~~~~~~~~   75 (208)
                      ++|+.+++++..+++.+... ...+.+|++++++++++++++.+.+ |++|++|||+|....    .++.+.+.++|++.
T Consensus        26 ~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~  104 (241)
T PF13561_consen   26 TDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKT  104 (241)
T ss_dssp             EESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHH
T ss_pred             EeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHH
Confidence            36888887777777766433 3359999999999999999999999 999999999998775    67788899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCC-CCeEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRV  154 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~-~gi~v  154 (208)
                      +++|+.+++.+++.+.|+|.+          +|+||++||..+..+.+++..|+++|+|+++|+|+++.||+ + +||||
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~----------~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~-~~~gIrV  173 (241)
T PF13561_consen  105 FDINVFSPFLLAQAALPLMKK----------GGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELA-PKKGIRV  173 (241)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHH----------EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHG-GHGTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhh----------CCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeee
Confidence            999999999999999998776          58899999999999999999999999999999999999999 8 99999


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+||+++|++.......++..+......|++|+++|+|||++++||+|+.++
T Consensus       174 N~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~  227 (241)
T PF13561_consen  174 NAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAAS  227 (241)
T ss_dssp             EEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGT
T ss_pred             eeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999987544333456677788899999999999999999999999863

...

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-36  Score=233.22  Aligned_cols=174  Identities=26%  Similarity=0.216  Sum_probs=149.8

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ..+++|++|.++++++++++.+++|++|++|||||+..+    .++.+.+.++|++++++|+.+++.+++.++|.|.+  
T Consensus        58 ~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--  135 (274)
T PRK08415         58 YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--  135 (274)
T ss_pred             eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--
Confidence            678999999999999999999999999999999998642    56778899999999999999999999999999964  


Q ss_pred             CCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                              +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+||+|+|++............
T Consensus       136 --------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~  206 (274)
T PRK08415        136 --------GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLG-KKGIRVNAISAGPIKTLAASGIGDFRMILK  206 (274)
T ss_pred             --------CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHhccchhhHHhh
Confidence                    47899999999998899999999999999999999999998 999999999999999975432111111111


Q ss_pred             hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          179 KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ......|++|+++|+|+|++++||+|+.+
T Consensus       207 ~~~~~~pl~r~~~pedva~~v~fL~s~~~  235 (274)
T PRK08415        207 WNEINAPLKKNVSIEEVGNSGMYLLSDLS  235 (274)
T ss_pred             hhhhhCchhccCCHHHHHHHHHHHhhhhh
Confidence            12235688999999999999999999764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-36  Score=230.31  Aligned_cols=191  Identities=20%  Similarity=0.155  Sum_probs=158.7

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~   81 (208)
                      +.++..+++.+.......++||++|+++++++++++.+++|++|++|||||+....    + +.+.+.++|+.++++|+.
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~  122 (261)
T PRK08690         43 KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY  122 (261)
T ss_pred             HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchH
Confidence            44444555544333456799999999999999999999999999999999986532    2 345778899999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|+++         +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+||+
T Consensus       123 ~~~~l~~~~~p~m~~~---------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrVn~i~PG~  192 (261)
T PRK08690        123 SLPALAKAARPMMRGR---------NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLG-KEGIRCNGISAGP  192 (261)
T ss_pred             HHHHHHHHHHHHhhhc---------CcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence            9999999999998653         47899999999998999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++..................|++|+++|+|+|++++||+++.+
T Consensus       193 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~  238 (261)
T PRK08690        193 IKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLS  238 (261)
T ss_pred             ccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            9998654322222333344556789999999999999999999865

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.7e-36  Score=229.66  Aligned_cols=193  Identities=22%  Similarity=0.220  Sum_probs=159.6

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~   76 (208)
                      +|+ ++.++..+++... +. ...+++|++|+++++++++++.+++|++|++|||+|....    .++.+.+.++|++++
T Consensus        41 ~r~-~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~  118 (260)
T PRK06603         41 YQS-EVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSL  118 (260)
T ss_pred             eCc-hHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHH
Confidence            355 3344445555443 33 3467999999999999999999999999999999997542    467788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++.+.|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+
T Consensus       119 ~vn~~~~~~~~~~~~~~m~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~  187 (260)
T PRK06603        119 HISCYSLLELSRSAEALMHD----------GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMG-ENNIRVNA  187 (260)
T ss_pred             HHHHHHHHHHHHHHHhhhcc----------CceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhh-hcCeEEEE
Confidence            99999999999999999853          58899999999988889999999999999999999999998 89999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+++|++........+.........|++|+++|+|+|++++||+|+++
T Consensus       188 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~  238 (260)
T PRK06603        188 ISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELS  238 (260)
T ss_pred             EecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccc
Confidence            999999998643211112223344456789999999999999999999865

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-36  Score=227.99  Aligned_cols=191  Identities=27%  Similarity=0.369  Sum_probs=165.6

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      ++..+++...+.++.++.+|+++++++.++++++.+.+|++|++|||||.....++.+.+.++|++++++|+.+++.+++
T Consensus        44 ~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  123 (251)
T PRK12481         44 PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ  123 (251)
T ss_pred             HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHH
Confidence            44555565556778899999999999999999999999999999999998877778889999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      .+.|.|++++.       +|+||++||..+..+.+....|+++|+|+.+|+++++.|+. ++|||||.|+||+++|++..
T Consensus       124 ~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~girvn~v~PG~v~t~~~~  195 (251)
T PRK12481        124 AVAKQFVKQGN-------GGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELS-QYNINVNAIAPGYMATDNTA  195 (251)
T ss_pred             HHHHHHHHcCC-------CCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCCccCchh
Confidence            99999987531       48999999999999888899999999999999999999998 89999999999999998754


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ................|.+|+++|+|+|++++||+|+.+
T Consensus       196 ~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~  234 (251)
T PRK12481        196 ALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSAS  234 (251)
T ss_pred             hcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            322222233344566789999999999999999999865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=5.4e-36  Score=229.93  Aligned_cols=190  Identities=25%  Similarity=0.270  Sum_probs=161.2

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      +.++..+++.+.+.++.++++|++|+++++++++++.+++|++|++|||+|+...    .++.+.+.++|++++++|+.+
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~  125 (258)
T PRK07370         46 RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYS  125 (258)
T ss_pred             hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHH
Confidence            4455556665554567789999999999999999999999999999999997642    567788999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++.++|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++||+||+|+||++
T Consensus       126 ~~~l~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~i~PG~v  194 (258)
T PRK07370        126 LAPLCKAAKPLMSE----------GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELG-PKNIRVNAISAGPI  194 (258)
T ss_pred             HHHHHHHHHHHHhh----------CCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhC-cCCeEEEEEecCcc
Confidence            99999999999964          47899999999999999999999999999999999999999 89999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++........+.........|++|+++|+|+++++.||+|+.+
T Consensus       195 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~  239 (258)
T PRK07370        195 RTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLA  239 (258)
T ss_pred             cCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhh
Confidence            998653221111223334456788999999999999999999865

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.8e-35  Score=222.41  Aligned_cols=190  Identities=24%  Similarity=0.237  Sum_probs=169.5

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++|+++.++++.. +.++.++++|+++++++..+.+++.+..+.||++|||||+...+++.+.+.++.+.++++|
T Consensus        36 vaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN  115 (265)
T COG0300          36 VARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLN  115 (265)
T ss_pred             EeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHH
Confidence            589999999999999975 5678899999999999999999999988899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.++..++++++|.|.+++        .|.||+|+|.+++.+.|..+.|++||+++.+|+++|+.|+. ++||+|..++|
T Consensus       116 ~~a~~~LT~~~lp~m~~~~--------~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~-~~gV~V~~v~P  186 (265)
T COG0300         116 ILALTRLTKAVLPGMVERG--------AGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELK-GTGVKVTAVCP  186 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEEec
Confidence            9999999999999999987        79999999999999999999999999999999999999998 99999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |++.|+++.....      ......+...+.+|+++|+.+++.+..
T Consensus       187 G~~~T~f~~~~~~------~~~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         187 GPTRTEFFDAKGS------DVYLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             Ccccccccccccc------ccccccchhhccCHHHHHHHHHHHHhc
Confidence            9999987751111      011112233478999999999887643

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-35  Score=224.57  Aligned_cols=198  Identities=26%  Similarity=0.379  Sum_probs=172.8

Q ss_pred             CCCcHHHHHHHHHHHHh--cCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++..  .+.++.++++|++|++++.++++++.+.++++|++|||||......+.+.+.++|+.++++
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~  116 (260)
T PRK07063         37 ADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAV  116 (260)
T ss_pred             EeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHh
Confidence            36888899999988876  4567889999999999999999999999999999999999876666677889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++|||||+|+
T Consensus       117 n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~-~~gIrvn~v~  187 (260)
T PRK07063        117 DLDGAWNGCRAVLPGMVERG--------RGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYA-ARNVRVNAIA  187 (260)
T ss_pred             hhHHHHHHHHHHHHHHHhhC--------CeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEe
Confidence            99999999999999998765        68999999999999999999999999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCC----ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++.....    .+...........|++|+++|+|+|++++||+++.+
T Consensus       188 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~  240 (260)
T PRK07063        188 PGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEA  240 (260)
T ss_pred             eCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9999998754321    112222334556788999999999999999999865

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-35  Score=227.19  Aligned_cols=191  Identities=20%  Similarity=0.211  Sum_probs=160.5

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n   79 (208)
                      +.++++++.+++.  +.++..+++|++|+++++++++++.+++|++|++|||+|+..    ..++.+.+.++|+.++++|
T Consensus        45 ~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n  122 (257)
T PRK08594         45 LEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNIS  122 (257)
T ss_pred             chHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhh
Confidence            3455666666553  457888999999999999999999999999999999999764    2466788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+|
T Consensus       123 ~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~P  191 (257)
T PRK08594        123 AYSLTAVAREAKKLMTE----------GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLG-KDGIRVNAISA  191 (257)
T ss_pred             HHHHHHHHHHHHHhccc----------CceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCCEEeeeec
Confidence            99999999999999853          58899999999999989999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++........+.........|++|+.+|+|+|++++||+|+.+
T Consensus       192 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~  239 (257)
T PRK08594        192 GPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLS  239 (257)
T ss_pred             CcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCccc
Confidence            999998543211111222334455688899999999999999999865

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-35  Score=226.00  Aligned_cols=194  Identities=19%  Similarity=0.157  Sum_probs=159.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-----CCCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-----AEDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-----~~~~~~~~~~~~~   76 (208)
                      +|+ +++++..+++......+..+.||++|+++++.+++++.+.+|++|++|||||+.....     +.+.+.++|+.++
T Consensus        39 ~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~  117 (262)
T PRK07984         39 YQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH  117 (262)
T ss_pred             ecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHh
Confidence            455 3455566666655445678999999999999999999999999999999999764322     4567889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++.+.|.+. +         +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+
T Consensus       118 ~~n~~~~~~~~~~~~~~~~-~---------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~  186 (262)
T PRK07984        118 DISSYSFVAMAKACRSMLN-P---------GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNA  186 (262)
T ss_pred             hhhhHHHHHHHHHHHHHhc-C---------CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCcEEee
Confidence            9999999999999988553 2         57899999999888889999999999999999999999998 89999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+++|++..................|.+|+++|+|++++++||+|+.+
T Consensus       187 i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~  237 (262)
T PRK07984        187 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLS  237 (262)
T ss_pred             eecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCccc
Confidence            999999997533211111222334456788999999999999999999864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-35  Score=226.32  Aligned_cols=175  Identities=23%  Similarity=0.200  Sum_probs=149.3

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (208)
                      ...+++|++|+++++++++.+.+++|++|++|||||.....    + +.+.+.++|+..+++|+.+++.+++.++|+|.+
T Consensus        58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~  137 (260)
T PRK06997         58 DLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD  137 (260)
T ss_pred             cceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence            45689999999999999999999999999999999986432    2 345788999999999999999999999999842


Q ss_pred             cCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHH
Q 028508           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (208)
Q Consensus        97 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~  176 (208)
                                +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+||+++|++........+.
T Consensus       138 ----------~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~  206 (260)
T PRK06997        138 ----------DASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLG-PKGIRANGISAGPIKTLAASGIKDFGKI  206 (260)
T ss_pred             ----------CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCccccchhccccchhhH
Confidence                      57899999999988889999999999999999999999998 8999999999999999754322111222


Q ss_pred             HHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ........|++|.++|+|++++++||+|+++
T Consensus       207 ~~~~~~~~p~~r~~~pedva~~~~~l~s~~~  237 (260)
T PRK06997        207 LDFVESNAPLRRNVTIEEVGNVAAFLLSDLA  237 (260)
T ss_pred             HHHHHhcCcccccCCHHHHHHHHHHHhCccc
Confidence            2334455688999999999999999999865

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-35  Score=224.99  Aligned_cols=176  Identities=26%  Similarity=0.287  Sum_probs=153.1

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (208)
                      .+..++||++|.++++++++++.+++|++|++|||||....    .++.+.+.++|++++++|+.+++.+++.++|.|.+
T Consensus        61 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~  140 (258)
T PRK07533         61 APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN  140 (258)
T ss_pred             cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc
Confidence            35678999999999999999999999999999999997642    46678899999999999999999999999999953


Q ss_pred             cCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHH
Q 028508           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (208)
Q Consensus        97 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~  176 (208)
                                +|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|+. ++||+||+|+||+++|++.......++.
T Consensus       141 ----------~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~  209 (258)
T PRK07533        141 ----------GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELG-PKGIRVHAISPGPLKTRAASGIDDFDAL  209 (258)
T ss_pred             ----------CCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHH
Confidence                      57899999999988889999999999999999999999998 8999999999999999875432211223


Q ss_pred             HHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ........|++|+.+|+|+|++++||+|+++
T Consensus       210 ~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~  240 (258)
T PRK07533        210 LEDAAERAPLRRLVDIDDVGAVAAFLASDAA  240 (258)
T ss_pred             HHHHHhcCCcCCCCCHHHHHHHHHHHhChhh
Confidence            3344556788999999999999999999864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.9e-35  Score=225.31  Aligned_cols=176  Identities=24%  Similarity=0.213  Sum_probs=150.3

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (208)
                      ....+++|++|+++++++++++.+++|++|++|||||+...    .++.+.+.++|+.++++|+.+++.+++.+.|.|.+
T Consensus        61 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~  140 (272)
T PRK08159         61 AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD  140 (272)
T ss_pred             CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            35678999999999999999999999999999999998642    46678899999999999999999999999998853


Q ss_pred             cCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHH
Q 028508           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (208)
Q Consensus        97 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~  176 (208)
                                +|+||++||.++..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+||+++|++..........
T Consensus       141 ----------~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~  209 (272)
T PRK08159        141 ----------GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLG-PKNIRVNAISAGPIKTLAASGIGDFRYI  209 (272)
T ss_pred             ----------CceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhc-ccCeEEEEeecCCcCCHHHhcCCcchHH
Confidence                      58899999998888899999999999999999999999998 8999999999999999754322111111


Q ss_pred             HHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ........|++|+++|+|+|++++||+|+++
T Consensus       210 ~~~~~~~~p~~r~~~peevA~~~~~L~s~~~  240 (272)
T PRK08159        210 LKWNEYNAPLRRTVTIEEVGDSALYLLSDLS  240 (272)
T ss_pred             HHHHHhCCcccccCCHHHHHHHHHHHhCccc
Confidence            1122235788899999999999999999865

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=221.65  Aligned_cols=196  Identities=25%  Similarity=0.316  Sum_probs=169.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++..+.+|++|++++.++++++.+.+|++|++|||+|.....++.+.+.++|+.++++|+
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (253)
T PRK05867         39 AARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNV  118 (253)
T ss_pred             EcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcc
Confidence            36888899999999887777788999999999999999999999999999999999988777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-C-chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~-~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .+++.+++.+.|.|.+++.       +++||++||..+.... + ....|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       119 ~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~i~  190 (253)
T PRK05867        119 TGVFLTAQAAAKAMVKQGQ-------GGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELA-PHKIRVNSVS  190 (253)
T ss_pred             hhHHHHHHHHHHHHHhcCC-------CcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHh-HhCeEEEEee
Confidence            9999999999999987541       4789999998876533 3 457899999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++.....   .....+....|++|+.+|+|+|++++||+|+.+
T Consensus       191 PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~  236 (253)
T PRK05867        191 PGYILTELVEPYT---EYQPLWEPKIPLGRLGRPEELAGLYLYLASEAS  236 (253)
T ss_pred             cCCCCCcccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9999998754321   222334556788999999999999999999865

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=220.67  Aligned_cols=198  Identities=29%  Similarity=0.360  Sum_probs=171.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+.++.++.+|+++++++.++++++.++++++|++|||||...+ .++.+.+.++|+.++++|
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N  115 (254)
T PRK07478         36 GARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATN  115 (254)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
Confidence            3688899999999988777788899999999999999999999999999999999998643 567788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.+++.++|.|++++        .++||++||..+. .+.+++..|+++|+|++.++++++.|+. ++||+|++|+
T Consensus       116 ~~~~~~~~~~~~~~l~~~~--------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~  186 (254)
T PRK07478        116 LTSAFLGAKHQIPAMLARG--------GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYG-AQGIRVNALL  186 (254)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCEEEEEEe
Confidence            9999999999999998865        6889999999886 5778899999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++..................|.++..+|+|+|+.++||+++.+
T Consensus       187 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  235 (254)
T PRK07478        187 PGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAA  235 (254)
T ss_pred             eCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999999755432222222333445678889999999999999999764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=219.78  Aligned_cols=198  Identities=25%  Similarity=0.328  Sum_probs=175.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++..+.+|++|++++.++++.+.++++++|++|||+|.....++.+.+.++|++++++|+
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (254)
T PRK08085         39 NDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQ  118 (254)
T ss_pred             EcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHh
Confidence            36888889999888887776788899999999999999999999999999999999987767788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.+++        .++||++||..+..+.++...|+++|++++.++++++.|+. ++||+||+|+||
T Consensus       119 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pG  189 (254)
T PRK08085        119 TAVFLVSQAVARYMVKRQ--------AGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELA-RHNIQVNGIAPG  189 (254)
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeC
Confidence            999999999999998765        68999999999888889999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.......+..........|++++++|+|++++++||+++.+
T Consensus       190 ~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~  236 (254)
T PRK08085        190 YFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKAS  236 (254)
T ss_pred             CCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999765433333334445567889999999999999999999765

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-34  Score=220.02  Aligned_cols=198  Identities=13%  Similarity=0.172  Sum_probs=169.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|++++++++.+++...+ ++.++++|++|+++++++++++.++++++|++|||+|...  +..+.+.+.++|.+.+++
T Consensus        30 ~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~  108 (259)
T PRK08340         30 SSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALL  108 (259)
T ss_pred             EeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhh
Confidence            3688888999888887654 6888999999999999999999999999999999999754  245677888999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++.++|.|.++..       +|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+|+.|+
T Consensus       109 n~~~~~~~~~~~l~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~gI~v~~v~  180 (259)
T PRK08340        109 HLVAPGYLTTLLIQAWLEKKM-------KGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYG-GKGIRAYTVL  180 (259)
T ss_pred             cchHHHHHHHHHHHHHHhcCC-------CCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence            999999999999999874321       68999999999998899999999999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCC----------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++.....          .++.+........|++|+++|+|+|++++||+|+++
T Consensus       181 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~  239 (259)
T PRK08340        181 LGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENA  239 (259)
T ss_pred             cCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCccc
Confidence            9999998753210          111122344556789999999999999999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-34  Score=220.23  Aligned_cols=198  Identities=23%  Similarity=0.263  Sum_probs=171.0

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...  +.++..+.+|++|.+++.++++++.+.+|++|++|||||.....++.+.+.++|++.+++
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~  117 (265)
T PRK07062         38 CGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELEL  117 (265)
T ss_pred             EeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence            368888898888888765  346788999999999999999999999999999999999877778888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+|+.|+
T Consensus       118 n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~-~~gi~v~~i~  188 (265)
T PRK07062        118 KYFSVINPTRAFLPLLRASA--------AASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELA-PKGVRVNSIL  188 (265)
T ss_pred             HhHHHHHHHHHHHHHHhccC--------CcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEe
Confidence            99999999999999998765        68999999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCC--------ChHHHHHhh--hhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKL--------APEEIRSKA--TDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++.....        ....+....  ....|++|+.+|+|+|++++||+++.+
T Consensus       189 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~  247 (265)
T PRK07062        189 LGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLS  247 (265)
T ss_pred             cCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchh
Confidence            9999998754211        011111111  245788999999999999999999754

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.2e-34  Score=220.56  Aligned_cols=195  Identities=27%  Similarity=0.362  Sum_probs=167.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+ ++++++.+++...+.++..+.+|+++++++..+++++.+.+|++|++|||||.... .++.+.+.+.|++++++|+
T Consensus        37 ~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~  115 (272)
T PRK08589         37 DIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDM  115 (272)
T ss_pred             eCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            577 77888888887767788999999999999999999999999999999999998753 5677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|+++         +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       116 ~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~PG  185 (272)
T PRK08589        116 RGTFLMTKMLLPLMMEQ---------GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYG-RDGIRANAIAPG  185 (272)
T ss_pred             HHHHHHHHHHHHHHHHc---------CCEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecC
Confidence            99999999999999865         47899999999999888999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCC--hHH----HHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLA--PEE----IRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++......  +..    +........|++|+.+|+|+++.++||+++.+
T Consensus       186 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  238 (272)
T PRK08589        186 TIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDS  238 (272)
T ss_pred             cccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchh
Confidence            999987643221  111    11112234678889999999999999999754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.2e-34  Score=223.25  Aligned_cols=195  Identities=26%  Similarity=0.215  Sum_probs=159.3

Q ss_pred             CCcHHHHHHHHHHHHhc----------CC---CeeEEEcCC--CC------------------HHHHHHHHHHHHHHhCC
Q 028508            2 GRRKTVLRSAVAALHSL----------GI---PAIGLEGDV--RK------------------REDAVRVVESTINHFGK   48 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~----------~~---~~~~~~~D~--~~------------------~~~~~~~~~~~~~~~g~   48 (208)
                      +|+.++++++..++++.          +.   ....+.+|+  ++                  .++++++++++.+++|+
T Consensus        41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~  120 (303)
T PLN02730         41 GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGS  120 (303)
T ss_pred             EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCC
Confidence            36777888887777531          11   145788898  43                  44899999999999999


Q ss_pred             ccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch-
Q 028508           49 LDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-  125 (208)
Q Consensus        49 id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-  125 (208)
                      +|+||||||...  ..++.+.+.++|++++++|+.+++.++|.++|.|++          .|+||++||..+..+.+++ 
T Consensus       121 iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~----------~G~II~isS~a~~~~~p~~~  190 (303)
T PLN02730        121 IDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNP----------GGASISLTYIASERIIPGYG  190 (303)
T ss_pred             CCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCEEEEEechhhcCCCCCCc
Confidence            999999998643  267888999999999999999999999999999975          4889999999998888865 


Q ss_pred             hHHHHhHHHHHHHHHHHHHHhcCC-CCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          126 IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       126 ~~y~~sKaa~~~~~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      ..|+++|+|+.+|+++|+.|+. + +|||||+|+||+++|++.......++.........|+.|+.+|+|++.+++||+|
T Consensus       191 ~~Y~asKaAl~~l~~~la~El~-~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS  269 (303)
T PLN02730        191 GGMSSAKAALESDTRVLAFEAG-RKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLAS  269 (303)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhC-cCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            5899999999999999999997 6 7999999999999999765421122222233345678899999999999999999


Q ss_pred             CCC
Q 028508          205 DAV  207 (208)
Q Consensus       205 ~~a  207 (208)
                      +.+
T Consensus       270 ~~a  272 (303)
T PLN02730        270 PLA  272 (303)
T ss_pred             ccc
Confidence            865

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=6e-34  Score=218.03  Aligned_cols=191  Identities=29%  Similarity=0.406  Sum_probs=165.5

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      ++..+++...+.++..+++|++|.+++.++++++.++++++|++|||||.....++.+.+.++|++++++|+.+++.+++
T Consensus        46 ~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  125 (253)
T PRK08993         46 TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ  125 (253)
T ss_pred             HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            44555565556678889999999999999999999999999999999998777778889999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      .+.|.|++++.       +|+||++||..+..+.+....|+++|+|+++++++++.|+. ++||+|+.|+||+++|++..
T Consensus       126 ~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pG~v~T~~~~  197 (253)
T PRK08993        126 AAAKHFIAQGN-------GGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWA-KHNINVNAIAPGYMATNNTQ  197 (253)
T ss_pred             HHHHHHHhCCC-------CeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccCcchh
Confidence            99999987531       48999999999998888889999999999999999999998 89999999999999998764


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ....+...........|.+|+.+|+|+|+.++||+|+.+
T Consensus       198 ~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~  236 (253)
T PRK08993        198 QLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSAS  236 (253)
T ss_pred             hhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            332223333345567789999999999999999999865

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-34  Score=217.15  Aligned_cols=196  Identities=28%  Similarity=0.391  Sum_probs=168.7

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+. ..++++.+++...+.++..+.+|++|++++.++++++.+.+|++|++|||+|.....++.+.+.++|++++++|+
T Consensus        39 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (254)
T PRK06114         39 DLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINL  118 (254)
T ss_pred             eCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcc
Confidence            3543 356777888877677888999999999999999999999999999999999988777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc--hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .+++.+++.+.|.|++++        .++||++||..+..+.++  +..|+++|+|+.+++++++.|+. ++||+||.|+
T Consensus       119 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~  189 (254)
T PRK06114        119 TGVFLSCQAEARAMLENG--------GGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV-GRGIRVNSIS  189 (254)
T ss_pred             hhhHHHHHHHHHHHHhcC--------CcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEe
Confidence            999999999999998765        689999999988776553  68899999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++...... ......+....|++|+.+|+|++++++||+|+.+
T Consensus       190 PG~i~t~~~~~~~~-~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~  237 (254)
T PRK06114        190 PGYTATPMNTRPEM-VHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAA  237 (254)
T ss_pred             ecCccCcccccccc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999987543211 1223345567789999999999999999999865

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-34  Score=219.20  Aligned_cols=196  Identities=24%  Similarity=0.299  Sum_probs=169.1

Q ss_pred             CcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC------CCCCCCCCHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF------LVPAEDLSPNGFRTV   75 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~------~~~~~~~~~~~~~~~   75 (208)
                      |+.++++++.+++... +.++.++++|++|+++++++++++.+.++++|++|||||...      ..++.+.+.++|+++
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  120 (260)
T PRK08416         41 SNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNI  120 (260)
T ss_pred             CCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHH
Confidence            5677788888887653 567889999999999999999999999999999999998643      245667788999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.+++.++|.|.+++        .|+||++||..+..+.+++..|+++|+|++.|+++++.|+. ++||+|+
T Consensus       121 ~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gi~v~  191 (260)
T PRK08416        121 YTATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELG-EKNIRVN  191 (260)
T ss_pred             HhhhhHHHHHHHHHHHHhhhccC--------CEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhh-hhCeEEE
Confidence            99999999999999999998765        68999999999888889999999999999999999999998 8999999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+||+++|++........+.........|.+|+.+|+|++++++||+++.+
T Consensus       192 ~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~  243 (260)
T PRK08416        192 AVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKA  243 (260)
T ss_pred             EEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhh
Confidence            9999999999754433333344445566788899999999999999998764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-34  Score=218.42  Aligned_cols=187  Identities=23%  Similarity=0.183  Sum_probs=154.1

Q ss_pred             HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHH
Q 028508            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         6 ~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +.++++.+++   +.++.++++|++|+++++++++++.+++|++|++|||||+...    .++.+.+.++|++++++|+.
T Consensus        46 ~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~  122 (256)
T PRK07889         46 RLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAY  122 (256)
T ss_pred             hHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhH
Confidence            4455555544   3357789999999999999999999999999999999998643    35667889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|.+          +|+||++++. +..+.+.+..|+++|+|+.+|+++|+.|+. ++|||||+|+||+
T Consensus       123 ~~~~l~~~~~~~m~~----------~g~Iv~is~~-~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~  190 (256)
T PRK07889        123 SLKSLAKALLPLMNE----------GGSIVGLDFD-ATVAWPAYDWMGVAKAALESTNRYLARDLG-PRGIRVNLVAAGP  190 (256)
T ss_pred             HHHHHHHHHHHhccc----------CceEEEEeec-ccccCCccchhHHHHHHHHHHHHHHHHHhh-hcCeEEEeeccCc
Confidence            999999999999963          5789999875 345667888899999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCC-CCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.............+....|++ ++.+|+|+|+.++||+++.+
T Consensus       191 v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~  237 (256)
T PRK07889        191 IRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWF  237 (256)
T ss_pred             ccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCccc
Confidence            99986543222222233344556777 68999999999999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1e-33  Score=216.93  Aligned_cols=199  Identities=33%  Similarity=0.428  Sum_probs=167.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeeEEEcCCCCHHHHHHHHHHHHHH-hCCccEEEeCCCCCCCC-CCCCCCHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAGNFLV-PAEDLSPNGFRTV   75 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~   75 (208)
                      ++|++++++++..++...+.   ++..+.||+++.+++++++++..++ +|++|++|||||..... ++.+.++++|+++
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~  117 (270)
T KOG0725|consen   38 TGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKI  117 (270)
T ss_pred             EeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHH
Confidence            47999999999999887643   5889999999999999999999999 79999999999998864 7899999999999


Q ss_pred             HHHHHHH-HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch-hHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           76 IEIDSVG-TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        76 ~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      +++|+.| .+.+.+.+.+.+.+.+        +|.|+++||..+..+.++. ..|+++|+|+++|+|+++.||. ++|||
T Consensus       118 ~~~Nl~G~~~~~~~~a~~~~~~~~--------gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~-~~gIR  188 (270)
T KOG0725|consen  118 MATNLRGSAFCLKQAARPMLKKSK--------GGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELA-KHGIR  188 (270)
T ss_pred             HhhhchhHHHHHHHHHHHHHHhcC--------CceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHh-hcCcE
Confidence            9999996 5556666666665555        7899999999998886666 7999999999999999999999 99999


Q ss_pred             EEEeecCcccCCCccCCCCh---HHHHHh--hhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          154 VNGIAPGPIKDTAGVSKLAP---EEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ||+|+||++.|+........   +++...  .....|++|.+.|+|+++.+.||+++.++
T Consensus       189 vN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~as  248 (270)
T KOG0725|consen  189 VNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDAS  248 (270)
T ss_pred             EEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCcccc
Confidence            99999999999972222221   222222  34567899999999999999999999763

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-33  Score=219.85  Aligned_cols=193  Identities=25%  Similarity=0.328  Sum_probs=165.8

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      +.+.++++.+.+...+.++.++.+|++|.+++.++++++.+.+|++|++|||||... ..++.+.+.++|++++++|+.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g  163 (294)
T PRK07985         84 EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFA  163 (294)
T ss_pred             chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHH
Confidence            345566777666666777888999999999999999999999999999999999753 3567788999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++++.|.|.+          +++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+|
T Consensus       164 ~~~l~~~~~~~m~~----------~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~i~PG~v  232 (294)
T PRK07985        164 LFWLTQEAIPLLPK----------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPI  232 (294)
T ss_pred             HHHHHHHHHHhhhc----------CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHh-HhCcEEEEEECCcC
Confidence            99999999999864          57899999999999999999999999999999999999998 89999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++......+.+....+....|++|.++|+|+|++++||+|+++
T Consensus       233 ~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~  277 (294)
T PRK07985        233 WTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQES  277 (294)
T ss_pred             ccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhc
Confidence            999753322222333445566788999999999999999999865

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=215.33  Aligned_cols=196  Identities=29%  Similarity=0.384  Sum_probs=170.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+ ++.+++.+.+...+.++.++++|+++.+++.++++++.+.+|++|++|||+|.....++.+.+.++|++.+++|+.
T Consensus        46 ~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  124 (258)
T PRK06935         46 THG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLN  124 (258)
T ss_pred             eCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCH
Confidence            455 5566677777666677889999999999999999999999999999999999877777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|++++        .|+||++||..+..+.+.+..|+++|+|++++++++++|+. ++||+||.|+||+
T Consensus       125 ~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~i~PG~  195 (258)
T PRK06935        125 SVYHLSQAVAKVMAKQG--------SGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELA-AYNIQVNAIAPGY  195 (258)
T ss_pred             HHHHHHHHHHHHHHhcC--------CeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecc
Confidence            99999999999998875        68999999999998999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.......+..........|.+++.+|+|+++.++||+|+.+
T Consensus       196 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (258)
T PRK06935        196 IKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRAS  241 (258)
T ss_pred             ccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhh
Confidence            9998654332222233344456788999999999999999999865

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.9e-33  Score=213.33  Aligned_cols=189  Identities=24%  Similarity=0.278  Sum_probs=167.0

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .+.+.++.+++.+.+.++.++++|++|.+++.++++++.+.+|++|++|||+|.....++.+.+.++|++++++|+.+++
T Consensus        53 ~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~  132 (256)
T PRK12859         53 QDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATT  132 (256)
T ss_pred             HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            44555677777777778899999999999999999999999999999999999877778889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .+++.++|.|.++.        .|+||++||..+..+.+++..|+++|++++.|+++++.|+. ++||+|+.|+||+++|
T Consensus       133 ~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~PG~i~t  203 (256)
T PRK12859        133 LLSSQFARGFDKKS--------GGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVA-HLGITVNAINPGPTDT  203 (256)
T ss_pred             HHHHHHHHHHhhcC--------CeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEEccccC
Confidence            99999999998765        68999999999999999999999999999999999999998 8899999999999998


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +...     ......+....|..+..+|+|+|+.++||+++.+
T Consensus       204 ~~~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~  241 (256)
T PRK12859        204 GWMT-----EEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEA  241 (256)
T ss_pred             CCCC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            7532     1233344556678888999999999999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-33  Score=212.92  Aligned_cols=194  Identities=28%  Similarity=0.312  Sum_probs=163.9

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHH----hC--CccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH----FG--KLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~----~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~   76 (208)
                      |+.++++++..++...+.++..+.+|+++.+++..+++++.+.    ++  ++|++|||||.....++.+.+.++|++++
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~  116 (252)
T PRK12747         37 NRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMV  116 (252)
T ss_pred             CCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHH
Confidence            5677788888888776777888999999999999999988763    34  89999999998765677888999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++.++|.|++          .|+||++||..+..+.++...|+++|+|+.+++++++.|+. ++|||||+
T Consensus       117 ~vN~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~girvn~  185 (252)
T PRK12747        117 SVNAKAPFFIIQQALSRLRD----------NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNA  185 (252)
T ss_pred             HHhhhHHHHHHHHHHHHhhc----------CCeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHh-HcCCEEEE
Confidence            99999999999999999865          47899999999999999999999999999999999999998 89999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+|+|++..................|++++.+|+|+|+++.||+++.+
T Consensus       186 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  236 (252)
T PRK12747        186 ILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDS  236 (252)
T ss_pred             EecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccc
Confidence            999999998754322222222222223467889999999999999999764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=5.4e-33  Score=215.50  Aligned_cols=197  Identities=30%  Similarity=0.378  Sum_probs=170.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC---------------CCCCC
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---------------VPAED   66 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---------------~~~~~   66 (208)
                      +|+.+.++++.+++...+.++..+++|+++++++..+++++.++++++|++|||+|...+               .++.+
T Consensus        41 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~  120 (278)
T PRK08277         41 DRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD  120 (278)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccccccccccccccccccc
Confidence            678888888888887777778899999999999999999999999999999999996543               24567


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHh
Q 028508           67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        67 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                      .+.++|++.+++|+.+++.+++.++|.|.+++        .|+||++||..+..+.++...|+++|+|++.|+++++.|+
T Consensus       121 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  192 (278)
T PRK08277        121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK--------GGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHF  192 (278)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence            88999999999999999999999999998765        6899999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEEeecCcccCCCccCCCC-----hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC-CC
Q 028508          147 GTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AV  207 (208)
Q Consensus       147 ~~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~-~a  207 (208)
                      . ++|||||.|+||+++|++......     ............|++|+++|+|+|++++||+|+ .+
T Consensus       193 ~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~  258 (278)
T PRK08277        193 A-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKAS  258 (278)
T ss_pred             C-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCcccc
Confidence            8 889999999999999986433211     112233445567899999999999999999998 54

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-33  Score=214.34  Aligned_cols=160  Identities=29%  Similarity=0.386  Sum_probs=144.7

Q ss_pred             CCCcHHHHHHHHHHHHhcC-C-CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-I-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      +.|+.++++++.+++++.+ . +++.++||++|.+++.++++++.+++|++|+||||||+.......+.+.+++.++|++
T Consensus        42 var~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdt  121 (282)
T KOG1205|consen   42 VARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDT  121 (282)
T ss_pred             eehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhh
Confidence            3578888999988888763 3 4889999999999999999999999999999999999998666677788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCC--eEEEE
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNG  156 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~g--i~v~~  156 (208)
                      |++|+..++|+++|+|++++        .|+||++||++|..+.|..+.|++||+|+.+|+++|+.|+. +.+  |++ .
T Consensus       122 N~~G~V~~Tk~alp~m~~r~--------~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~-~~~~~i~i-~  191 (282)
T KOG1205|consen  122 NVFGTVYLTKAALPSMKKRN--------DGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELI-PLGTIIII-L  191 (282)
T ss_pred             hchhhHHHHHHHHHHhhhcC--------CCeEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhh-ccCceEEE-E
Confidence            99999999999999999986        69999999999999999999999999999999999999998 766  666 9


Q ss_pred             eecCcccCCCccCC
Q 028508          157 IAPGPIKDTAGVSK  170 (208)
Q Consensus       157 v~pG~v~t~~~~~~  170 (208)
                      |+||+|+|.+....
T Consensus       192 V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  192 VSPGPIETEFTGKE  205 (282)
T ss_pred             EecCceeecccchh
Confidence            99999999865443

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-33  Score=216.43  Aligned_cols=193  Identities=22%  Similarity=0.259  Sum_probs=162.2

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .++++++.+++...+.++..+.+|++|++++.++++++.+.+|++|++|||||+....++.+.+.++|++++++|+.+++
T Consensus        49 ~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~  128 (286)
T PRK07791         49 GSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHF  128 (286)
T ss_pred             hhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHH
Confidence            37788888888877778889999999999999999999999999999999999887777888999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .+++.++|+|+++..+.  ....|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+|| +.|
T Consensus       129 ~l~~~~~~~~~~~~~~~--~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~Pg-~~T  204 (286)
T PRK07791        129 ATLRHAAAYWRAESKAG--RAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELG-RYGVTVNAIAPA-ART  204 (286)
T ss_pred             HHHHHHHHHHHHhcccC--CCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHH-HhCeEEEEECCC-CCC
Confidence            99999999997643110  11247999999999999999999999999999999999999998 899999999999 777


Q ss_pred             CCccCCCChHHHHHhhhhhhcCC--CCCCHHHHHHHHHHhcCCCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAY--KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++....      ........+.+  +..+|+|+|++++||+|+.+
T Consensus       205 ~~~~~~------~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~  243 (286)
T PRK07791        205 RMTETV------FAEMMAKPEEGEFDAMAPENVSPLVVWLGSAES  243 (286)
T ss_pred             Ccchhh------HHHHHhcCcccccCCCCHHHHHHHHHHHhCchh
Confidence            754211      11112222333  45799999999999999764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=219.97  Aligned_cols=192  Identities=21%  Similarity=0.200  Sum_probs=156.9

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCC-CCCC----CCCCCCCCHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-AGNF----LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a-g~~~----~~~~~~~~~~~~~~~~~~n   79 (208)
                      +++++++.+++...+.++.++++|++|+++++++++++.+++|++|++|||+ |...    ..++.+.+.++|++++++|
T Consensus        52 ~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n  131 (305)
T PRK08303         52 PETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLA  131 (305)
T ss_pred             cchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHh
Confidence            3567777788877677788899999999999999999999999999999999 7531    2567778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      +.+++.+++.++|.|.+++        +|+||++||..+..   +.++...|+++|+|+.+|+++|+.|+. ++|||||+
T Consensus       132 ~~~~~~~~~~~lp~m~~~~--------~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~-~~gIrVn~  202 (305)
T PRK08303        132 IDTHLITSHFALPLLIRRP--------GGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELA-PHGATAVA  202 (305)
T ss_pred             hHHHHHHHHHHHHHhhhCC--------CcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEE
Confidence            9999999999999998765        68999999976543   334577899999999999999999999 89999999


Q ss_pred             eecCcccCCCccCCC--ChHHHHHhhhhhhc-CCCCCCHHHHHHHHHHhcCCC
Q 028508          157 IAPGPIKDTAGVSKL--APEEIRSKATDYMA-AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       157 v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+||+|+|++.....  .+..+.. .....| .++..+|+|+|++++||+|++
T Consensus       203 v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        203 LTPGWLRSEMMLDAFGVTEENWRD-ALAKEPHFAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             ecCCccccHHHHHhhccCccchhh-hhccccccccCCCHHHHHHHHHHHHcCc
Confidence            999999998643211  1111111 122345 467789999999999999986

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.1e-32  Score=211.22  Aligned_cols=198  Identities=25%  Similarity=0.282  Sum_probs=172.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++..++...+.++.++++|+++++++.++++++.++++++|++|||+|.....++.+.+.++|+.++++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  112 (256)
T PRK08643         33 DYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVG  112 (256)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence            67888888888888776777889999999999999999999999999999999999877677888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|.+.+.       .++||++||..+..+.++...|+++|++++.|++.++.|+. ++||+|++|+||+
T Consensus       113 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~  184 (256)
T PRK08643        113 GVIWGIQAAQEAFKKLGH-------GGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLA-SEGITVNAYAPGI  184 (256)
T ss_pred             HHHHHHHHHHHHHHhcCC-------CCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCC
Confidence            999999999999976531       47899999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCC---------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|+++....         .+......+....+.+++.+++|++++++||+++.+
T Consensus       185 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~  239 (256)
T PRK08643        185 VKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDS  239 (256)
T ss_pred             CcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9998754311         111122345556788899999999999999999865

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8e-33  Score=211.98  Aligned_cols=197  Identities=26%  Similarity=0.391  Sum_probs=175.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|++++++++.+.+...+.++..+++|++|+++++.+++.+.+.++++|++|||+|...+.++.+.+.++|++++++|+.
T Consensus        41 ~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  120 (255)
T PRK07523         41 GRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNIS  120 (255)
T ss_pred             eCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888888888888776777889999999999999999999999999999999999887778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|.++.        .++||++||..+..+.+++..|+++|++++.++++++.|+. ++||+|+.|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~  191 (255)
T PRK07523        121 SVFYVGQAVARHMIARG--------AGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGY  191 (255)
T ss_pred             HHHHHHHHHHHHHHHhC--------CeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECc
Confidence            99999999999998765        68999999999888899999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.............+....|++++..|+|+|++++||+++.+
T Consensus       192 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  237 (255)
T PRK07523        192 FDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDAS  237 (255)
T ss_pred             ccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9998754332233344455567788999999999999999999754

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1e-32  Score=216.18  Aligned_cols=192  Identities=26%  Similarity=0.359  Sum_probs=166.1

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      ....+++.+.+...+.++.++.||++|.++++++++++.+.++++|++|||||... ..++.+.+.++|+.++++|+.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~  170 (300)
T PRK06128         91 EQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAM  170 (300)
T ss_pred             hHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            34566777777777778889999999999999999999999999999999999764 35677889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+++.+.|.|.+          +++||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+||.|+||+++
T Consensus       171 ~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~  239 (300)
T PRK06128        171 FWLCKAAIPHLPP----------GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVW  239 (300)
T ss_pred             HHHHHHHHHhcCc----------CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCc
Confidence            9999999998864          57899999999999999999999999999999999999998 899999999999999


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++.............+....|++|+++|+|+|++++||+++.+
T Consensus       240 t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~  283 (300)
T PRK06128        240 TPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQES  283 (300)
T ss_pred             CCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99754322223333445566789999999999999999999764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=211.03  Aligned_cols=197  Identities=28%  Similarity=0.422  Sum_probs=171.6

Q ss_pred             CCcHHHHHHHHHHHHh-cC-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHS-LG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.+++++..++++. .+ .++..+++|+++++++.++++++.+.+|++|++|||+|......+.+.+.++|++++++|
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n  128 (262)
T PRK07831         49 DIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVT  128 (262)
T ss_pred             eCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence            5788888888888866 23 468889999999999999999999999999999999998777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.+.|.|+.+..       .|+||+++|..+..+.+++..|+++|+|+++|+++++.|+. ++||+|+.|+|
T Consensus       129 ~~~~~~l~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~-~~gI~v~~i~P  200 (262)
T PRK07831        129 LTGTFRATRAALRYMRARGH-------GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAA-EYGVRINAVAP  200 (262)
T ss_pred             hHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEee
Confidence            99999999999999986531       47899999999998889999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++..... +.+....+....|++|+.+|+|+|++++||+|+.+
T Consensus       201 g~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~  247 (262)
T PRK07831        201 SIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYS  247 (262)
T ss_pred             CCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            999998754432 23333445556788999999999999999999865

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=210.66  Aligned_cols=198  Identities=24%  Similarity=0.291  Sum_probs=174.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.+++++..+++...+.++..+.+|++|.+++.++++++.+.+|++|++|||+|...+ .++.+.+.++|++++++|
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n  116 (253)
T PRK06172         37 ADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVN  116 (253)
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHh
Confidence            3688888888888887777788999999999999999999999999999999999998654 447788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|.+.++.        .++||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+|++|+|
T Consensus       117 ~~~~~~~~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~i~P  187 (253)
T PRK06172        117 VKGVWLCMKYQIPLMLAQG--------GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYA-KKGIRVNAVCP  187 (253)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            9999999999999998765        68899999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCC-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++...... .......+....|..|..+|+|+++.++||+++.+
T Consensus       188 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~  236 (253)
T PRK06172        188 AVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGA  236 (253)
T ss_pred             CCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccc
Confidence            9999997654322 23344445566788899999999999999999864

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=209.97  Aligned_cols=199  Identities=42%  Similarity=0.599  Sum_probs=169.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++++|++|+++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        32 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~  111 (252)
T PRK07677         32 GRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLN  111 (252)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhH
Confidence            57888888888888766667889999999999999999999999999999999999766567778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++++++++|.+...       +|+||++||..+..+.+....|+++|+|+.+|+++|+.|+.+.+||+|+.|+||+
T Consensus       112 ~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~  184 (252)
T PRK07677        112 GTFYCSQAVGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGP  184 (252)
T ss_pred             HHHHHHHHHHHHHHhcCC-------CEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecc
Confidence            999999999999876431       5899999999998888888999999999999999999999624699999999999


Q ss_pred             ccCCCccCC-CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|+..... ..++..........+.+++.+++|+++++.||+++.+
T Consensus       185 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (252)
T PRK07677        185 IERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEA  231 (252)
T ss_pred             cccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccc
Confidence            996543221 1233334455566788899999999999999998754

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=209.85  Aligned_cols=198  Identities=29%  Similarity=0.355  Sum_probs=173.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+.++..+++|+++.+++.++++++.+.++++|++|||+|... ..++.+.+.++|+..+++|
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n  117 (252)
T PRK07035         38 SSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVN  117 (252)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHh
Confidence            368888888888888777777888999999999999999999999999999999999753 3566778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|++++..        .++||++||..+..+.++++.|+++|+++++|+++++.|+. ++||+|++|+|
T Consensus       118 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~i~P  188 (252)
T PRK07035        118 IRGYFFMSVEAGKLMKEQG--------GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA-PFGIRVNALLP  188 (252)
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCEEEEEEee
Confidence            9999999999999998765        68999999999998999999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++..................|..+..+|+|+|+.++||+++.+
T Consensus       189 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  236 (252)
T PRK07035        189 GLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDAS  236 (252)
T ss_pred             ccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccc
Confidence            999998755433333344455566788899999999999999999864

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.4e-32  Score=210.78  Aligned_cols=198  Identities=27%  Similarity=0.361  Sum_probs=174.9

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.+.++++.+++...  +.++..+.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.++|++.+++
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~  118 (257)
T PRK09242         39 VARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFET  118 (257)
T ss_pred             EeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhh
Confidence            368888888888888765  567889999999999999999999999999999999999876667778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++++.|+|.+++        .++||++||..+..+.++...|+++|++++.++++++.|+. ++||+|+.|+
T Consensus       119 n~~~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~  189 (257)
T PRK09242        119 NLFSAFELSRYAHPLLKQHA--------SSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA-EDGIRVNAVA  189 (257)
T ss_pred             hhHHHHHHHHHHHHHHHhcC--------CceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHH-HhCeEEEEEE
Confidence            99999999999999998765        68899999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++..................|..+..+++|++++++||+++.+
T Consensus       190 Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  238 (257)
T PRK09242        190 PWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAA  238 (257)
T ss_pred             ECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999999766544444444455566788899999999999999998753

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=209.67  Aligned_cols=196  Identities=29%  Similarity=0.446  Sum_probs=170.8

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.+.++++.+++...+.++.++.+|++|.+++.++++.+.+.++++|++|||+|...+.++.+.+.++|++++++|+.++
T Consensus        41 ~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~  120 (261)
T PRK08936         41 DEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGA  120 (261)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHH
Confidence            45567777888877677788999999999999999999999999999999999988777788889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+++.+++.|.+++.       +|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|+.|+||+++
T Consensus       121 ~~~~~~~l~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~  192 (261)
T PRK08936        121 FLGSREAIKYFVEHDI-------KGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYA-PKGIRVNNIGPGAIN  192 (261)
T ss_pred             HHHHHHHHHHHHhcCC-------CcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECcCC
Confidence            9999999999987542       58999999999988999999999999999999999999998 889999999999999


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++..................|.+++.+++|+++.++||+++.+
T Consensus       193 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  236 (261)
T PRK08936        193 TPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEA  236 (261)
T ss_pred             CCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99755433333333444566788899999999999999999765

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=212.98  Aligned_cols=188  Identities=22%  Similarity=0.207  Sum_probs=156.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++++|++|++++.++++++ ++++++|++|||||...       ..++|+.++++|+
T Consensus        30 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~-------~~~~~~~~~~vN~  101 (275)
T PRK06940         30 ADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSP-------SQASPEAILKVDL  101 (275)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCC-------chhhHHHHHHHhh
Confidence            368888888888888766667889999999999999999988 56799999999999742       2367999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC------------------------------CchhHHHH
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------------------------------WYQIHVSA  130 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------------------------~~~~~y~~  130 (208)
                      .+++.+++.+.|.|.+          +|++|+++|..+..+.                              +++..|++
T Consensus       102 ~g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~a  171 (275)
T PRK06940        102 YGTALVLEEFGKVIAP----------GGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI  171 (275)
T ss_pred             HHHHHHHHHHHHHHhh----------CCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHH
Confidence            9999999999999865          4668999998776542                              24678999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC--hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       131 sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|+..++++++.|+. ++|||||+|+||+++|++......  ..+.........|++|+++|+|+|++++||+|+.+
T Consensus       172 sKaa~~~~~~~la~e~~-~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~  249 (275)
T PRK06940        172 AKRANALRVMAEAVKWG-ERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRG  249 (275)
T ss_pred             HHHHHHHHHHHHHHHHc-cCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCccc
Confidence            99999999999999998 899999999999999997543221  12223344456788999999999999999999865

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.3e-35  Score=204.13  Aligned_cols=193  Identities=24%  Similarity=0.296  Sum_probs=175.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+++.+..+.++.   ..-+..+++|+++++.+.+++..+    +++|++|||||..-..+|.+.+.+.+++.|++|+
T Consensus        37 vaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v----~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNv  109 (245)
T KOG1207|consen   37 VARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV----FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNV  109 (245)
T ss_pred             EecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc----CchhhhhccchhhhcchHHHHhHHhhcceeeeee
Confidence            368888888887765   334788999999988887766543    7899999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+.+.+.|.....+..+..       .|.||++||.++.++..+...||++|+|+++++|+|+.|++ +++||||+++|-
T Consensus       110 ravi~v~Q~var~lv~R~~-------~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELG-p~kIRVNsVNPT  181 (245)
T KOG1207|consen  110 RAVILVAQLVARNLVDRQI-------KGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELG-PQKIRVNSVNPT  181 (245)
T ss_pred             eeeeeHHHHHHHhhhhccC-------CceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhC-cceeEeeccCCe
Confidence            9999999998888887764       68899999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      .+.|.|....+++..-.+.+...+|++|+...+|+.++++||+|+.++
T Consensus       182 VVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  182 VVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSS  229 (245)
T ss_pred             EEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcC
Confidence            999999999888888788899999999999999999999999999874

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-32  Score=209.75  Aligned_cols=192  Identities=23%  Similarity=0.281  Sum_probs=162.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++++|++|++++.++++++.+.++++|++|||+|...... .+.+.++|++.+++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~  112 (261)
T PRK08265         37 DIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDG-LASSRADWLAALDVNLV  112 (261)
T ss_pred             eCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCc-CcCCHHHHHHHHhHhhH
Confidence            67877777776665   456888999999999999999999999999999999999865443 35688999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|+ +.        +|+||++||..+..+.+++..|+++|+++.+++++++.|+. ++||+||+|+||+
T Consensus       113 ~~~~~~~~~~~~~~-~~--------~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~  182 (261)
T PRK08265        113 SAAMLAQAAHPHLA-RG--------GGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLA-PDGIRVNSVSPGW  182 (261)
T ss_pred             HHHHHHHHHHHHHh-cC--------CcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCEEEEEEccCC
Confidence            99999999999997 43        68999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCC-hHHHHHhh-hhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLA-PEEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++...... ........ ....|++|+++|+|+|++++||+++.+
T Consensus       183 ~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~  230 (261)
T PRK08265        183 TWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAA  230 (261)
T ss_pred             ccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccc
Confidence            99987543221 11111111 234578899999999999999999764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-32  Score=207.63  Aligned_cols=198  Identities=29%  Similarity=0.351  Sum_probs=175.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.+.++++.+++...+.++..+.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.++|++.+++|+
T Consensus        41 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  120 (256)
T PRK06124         41 NGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDL  120 (256)
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            36888888888888877777788999999999999999999999999999999999987777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+.+.+++.|.+++        .++||++||..+..+.+++..|+++|+++..+++.++.|+. ++||+|+.|+||
T Consensus       121 ~~~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg  191 (256)
T PRK06124        121 VAPILLSRLAAQRMKRQG--------YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFG-PHGITSNAIAPG  191 (256)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEEC
Confidence            999999999999998765        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|+.......++.....+....+.+++..++|++++++||+++.+
T Consensus       192 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  238 (256)
T PRK06124        192 YFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAA  238 (256)
T ss_pred             CccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            99998754433334444455566788899999999999999999875

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=8e-32  Score=206.45  Aligned_cols=195  Identities=30%  Similarity=0.444  Sum_probs=170.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+.++++.+++...+.++.++.+|+++.+++.++++.+.+.++++|++|||+|...+.++ +.+.++|+..+++|+.
T Consensus        42 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~  120 (255)
T PRK06113         42 DINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVF  120 (255)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhh
Confidence            577888888888887767788899999999999999999999999999999999998765554 6788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|+|.+.+        .++||++||..+..+.+++..|+++|+|+++|+++++.++. ++||+||.|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~  191 (255)
T PRK06113        121 SFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGA  191 (255)
T ss_pred             hHHHHHHHHHHHHHhcC--------CcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeccc
Confidence            99999999999997654        57899999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++......+ ..........|..++++|+|++++++||+++.+
T Consensus       192 ~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  236 (255)
T PRK06113        192 ILTDALKSVITP-EIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA  236 (255)
T ss_pred             ccccccccccCH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999876543332 233445566788889999999999999998754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=6.4e-32  Score=206.11  Aligned_cols=191  Identities=30%  Similarity=0.426  Sum_probs=163.5

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      +++.+.+...+.++..+.+|+++.+++..+++++.+.++++|++|||+|...+.++.+.+.++|++++++|+.+++.+++
T Consensus        41 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  120 (248)
T TIGR01832        41 SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ  120 (248)
T ss_pred             HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            45555565556678899999999999999999999999999999999999877777888999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      .+.+.|++++.       .++||++||..+..+.++...|+++|+++++++++++.|+. ++||+|++|+||+++|++..
T Consensus       121 ~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~  192 (248)
T TIGR01832       121 AAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWA-AKGINVNAIAPGYMATNNTQ  192 (248)
T ss_pred             HHHHHHHhcCC-------CeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEECcCcCcchh
Confidence            99999976531       47899999999888888899999999999999999999998 89999999999999998754


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ................|.+++.+|+|+|++++||+++.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (248)
T TIGR01832       193 ALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS  231 (248)
T ss_pred             ccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            332222222344556788899999999999999999754

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-32  Score=207.96  Aligned_cols=197  Identities=29%  Similarity=0.395  Sum_probs=171.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++++..+++...+.++.++++|++|.++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  120 (265)
T PRK07097         41 DINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLN  120 (265)
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhH
Confidence            57888888888888877778999999999999999999999999999999999999987778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .++||++||..+..+.+++..|+++|+++..++++++.|+. ++||+|++|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~-~~gi~v~~v~Pg~  191 (265)
T PRK07097        121 APFIVSKAVIPSMIKKG--------HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG-EANIQCNGIGPGY  191 (265)
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCceEEEEEecc
Confidence            99999999999998765        68999999999888889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCC------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +.|++......      ...+........|..++.+|+|+|+.++||+++.+
T Consensus       192 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  243 (265)
T PRK07097        192 IATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDAS  243 (265)
T ss_pred             ccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCccc
Confidence            99986543211      11122233445677889999999999999998743

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-31  Score=204.65  Aligned_cols=195  Identities=24%  Similarity=0.353  Sum_probs=170.6

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.+.++++.+++...+.++..+.+|++++++++++++++.++++++|++|||+|......+.+.+.++|++++++|+.+
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  114 (256)
T PRK12743         35 SDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG  114 (256)
T ss_pred             CChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence            56777888888888778789999999999999999999999999999999999998776677788999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++++.++|++++.       +|+||++||..+..+.++...|+++|+++.+++++++.++. ++||+|+.|+||++
T Consensus       115 ~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~Pg~~  186 (256)
T PRK12743        115 AFLCSQIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELV-EHGILVNAVAPGAI  186 (256)
T ss_pred             HHHHHHHHHHHHHhcCC-------CeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCc
Confidence            99999999999976531       47899999999999999999999999999999999999998 88999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++....  ..+.........|..+..+|+|++++++||+++.+
T Consensus       187 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  229 (256)
T PRK12743        187 ATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGA  229 (256)
T ss_pred             cCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            99865432  22233334456788889999999999999998754

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-32  Score=211.24  Aligned_cols=196  Identities=18%  Similarity=0.164  Sum_probs=168.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++.. +.++..+.+|++|.+++.++++++.+++|++|++|||+|.....++.+.+.++|++++++|+
T Consensus        39 ~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~  117 (296)
T PRK05872         39 VDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNL  117 (296)
T ss_pred             EeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHh
Confidence            36888888888888753 45677788999999999999999999999999999999998778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.|.|.+.         .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+|+.++||
T Consensus       118 ~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~-~~gi~v~~v~Pg  187 (296)
T PRK05872        118 LGVFHTVRATLPALIER---------RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVA-HHGVTVGSAYLS  187 (296)
T ss_pred             HHHHHHHHHHHHHHHHc---------CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHCcEEEEEecC
Confidence            99999999999999764         47899999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhh--hcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.............+...  .|+++..+++|+++.+++++++..
T Consensus       188 ~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~  236 (296)
T PRK05872        188 WIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRA  236 (296)
T ss_pred             cccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCC
Confidence            99998765433221222222233  356788999999999999998754

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.7e-32  Score=211.01  Aligned_cols=164  Identities=27%  Similarity=0.276  Sum_probs=140.2

Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 028508           33 EDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII  110 (208)
Q Consensus        33 ~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  110 (208)
                      ++++++++++.+++|++|++|||||...  ..++.+.+.++|++++++|+.|++.++++++|+|.+          .|+|
T Consensus       104 ~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~----------~G~i  173 (299)
T PRK06300        104 YTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP----------GGST  173 (299)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc----------CCeE
Confidence            4689999999999999999999998754  367888999999999999999999999999999965          4789


Q ss_pred             EEeccccccccCCchh-HHHHhHHHHHHHHHHHHHHhcCC-CCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCC
Q 028508          111 INISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK  188 (208)
Q Consensus       111 v~iss~~~~~~~~~~~-~y~~sKaa~~~~~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  188 (208)
                      |+++|..+..+.+++. .|+++|+|+.+|+++|+.|+. + +|||||+|+||++.|++......++..........|++|
T Consensus       174 i~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~-~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r  252 (299)
T PRK06300        174 ISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAG-RRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPE  252 (299)
T ss_pred             EEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCC
Confidence            9999999988888775 899999999999999999998 6 599999999999999865332112222333445578889


Q ss_pred             CCCHHHHHHHHHHhcCCCC
Q 028508          189 FGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       189 ~~~~~dva~~~~~L~s~~a  207 (208)
                      ..+|+|++..++||+|+.+
T Consensus       253 ~~~peevA~~v~~L~s~~~  271 (299)
T PRK06300        253 PMEAEQVGAAAAFLVSPLA  271 (299)
T ss_pred             CcCHHHHHHHHHHHhCccc
Confidence            9999999999999999865

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=206.10  Aligned_cols=193  Identities=23%  Similarity=0.245  Sum_probs=165.4

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++... +.++..+.+|+++++++..+++.    ++++|++|||+|.....++.+.+.++|+.++++|+
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  113 (259)
T PRK06125         38 ARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKV  113 (259)
T ss_pred             eCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhh
Confidence            68888888888888764 55788899999999999888764    47999999999988777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.|.|.+++        .|+||++||..+..+.+.+..|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       114 ~~~~~~~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~-~~gi~v~~i~PG  184 (259)
T PRK06125        114 FGYIDLTRLAYPRMKARG--------SGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSL-DDGVRVVGVNPG  184 (259)
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecC
Confidence            999999999999998765        68999999999988888899999999999999999999998 899999999999


Q ss_pred             cccCCCccCC--------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++....        ..+.+....+....|.+++.+|+|+|++++||+++.+
T Consensus       185 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  239 (259)
T PRK06125        185 PVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRS  239 (259)
T ss_pred             ccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchh
Confidence            9999854321        1122223344556788899999999999999998764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.5e-32  Score=203.42  Aligned_cols=159  Identities=19%  Similarity=0.199  Sum_probs=149.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +.|.+..+++.+++++.| +++.+.||++|.+++.++.++++++.|++|++|||||+....++.+.+.+++++++++|+.
T Consensus        69 Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~  147 (300)
T KOG1201|consen   69 DINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI  147 (300)
T ss_pred             eccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhH
Confidence            456777888999998875 8999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc--CCCCeEEEEeec
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAP  159 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~gi~v~~v~p  159 (208)
                      |.+..+|+|+|.|.+.+        +|.||.++|.+|..+.++-..|++||+|+.+|.++|..|+.  ..+||+...++|
T Consensus       148 ~~f~t~kaFLP~M~~~~--------~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P  219 (300)
T KOG1201|consen  148 AHFWTTKAFLPKMLENN--------NGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCP  219 (300)
T ss_pred             HHHHHHHHHhHHHHhcC--------CceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEee
Confidence            99999999999999988        89999999999999999999999999999999999999984  366899999999


Q ss_pred             CcccCCCccC
Q 028508          160 GPIKDTAGVS  169 (208)
Q Consensus       160 G~v~t~~~~~  169 (208)
                      ++++|+++..
T Consensus       220 ~~i~Tgmf~~  229 (300)
T KOG1201|consen  220 YFINTGMFDG  229 (300)
T ss_pred             eeccccccCC
Confidence            9999987764

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=211.38  Aligned_cols=191  Identities=20%  Similarity=0.235  Sum_probs=166.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.++++..+.++..+.+|++|.++++++++++.+.+|++|++|||||+....++.+.+.++|++++++|+
T Consensus        37 ~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~  116 (330)
T PRK06139         37 AARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNL  116 (330)
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhh
Confidence            36899999999999988888888999999999999999999999889999999999998878888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCC-CeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY-AIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~-gi~v~~v~p  159 (208)
                      .+++.+++.++|+|++++        .|+||+++|..+..+.+++..|+++|+|+.+|+++|+.|+. ++ ||+|+.|+|
T Consensus       117 ~g~~~~~~~~lp~~~~~~--------~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~-~~~gI~V~~v~P  187 (330)
T PRK06139        117 IGYMRDAHAALPIFKKQG--------HGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELA-DHPDIHVCDVYP  187 (330)
T ss_pred             HHHHHHHHHHHHHHHHcC--------CCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEec
Confidence            999999999999999876        68999999999999999999999999999999999999997 64 999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+++|++........     .....+.....+|+++|+++++++..
T Consensus       188 g~v~T~~~~~~~~~~-----~~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        188 AFMDTPGFRHGANYT-----GRRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             CCccCcccccccccc-----cccccCCCCCCCHHHHHHHHHHHHhC
Confidence            999998754321100     00111233467999999999998854

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-32  Score=207.00  Aligned_cols=191  Identities=26%  Similarity=0.268  Sum_probs=160.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHH----HHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNG----FRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~----~~~~~   76 (208)
                      +|+.++++++.+++   +.++.++++|++|++++..+++++.+.++++|++|||||+... .++.+.+.++    |++++
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~  113 (263)
T PRK06200         37 ERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIF  113 (263)
T ss_pred             eCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHe
Confidence            57777777766655   4467889999999999999999999999999999999997643 4555666655    89999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++.+.|.|.++         +|+||+++|..+..+.++...|+++|+|+..|+++++.|+. + +||||+
T Consensus       114 ~~n~~~~~~~~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~-~Irvn~  182 (263)
T PRK06200        114 NVNVKGYLLGAKAALPALKAS---------GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELA-P-KIRVNG  182 (263)
T ss_pred             eeccHhHHHHHHHHHHHHHhc---------CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-c-CcEEEE
Confidence            999999999999999998754         58899999999999888999999999999999999999998 6 499999


Q ss_pred             eecCcccCCCccCCC---------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          157 IAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       157 v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+||+++|++.....         .............|++|+.+|+|+|++++||+|+.
T Consensus       183 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        183 VAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             EeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheeccc
Confidence            999999998753211         01112334456678999999999999999999976

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-31  Score=203.80  Aligned_cols=178  Identities=30%  Similarity=0.422  Sum_probs=154.1

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|++++.++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.+++.+++.++|.|.+++  
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--  129 (255)
T PRK06463         52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--  129 (255)
T ss_pred             CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--
Confidence            467899999999999999999999999999999999987667777889999999999999999999999999998665  


Q ss_pred             CCCCCCCceEEEeccccccc-cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCCh---HHH
Q 028508          101 QASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEI  176 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~  176 (208)
                            .++||++||..+.. +.++...|+++|+|+++|+++++.|+. ++||+|+.|+||+++|++......+   ...
T Consensus       130 ------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~  202 (255)
T PRK06463        130 ------NGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKL  202 (255)
T ss_pred             ------CcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCCCchhhcccCccchHHH
Confidence                  68999999998875 456788899999999999999999998 8899999999999999876432221   123


Q ss_pred             HHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ...+....|++++.+|+|+|++++||+++.+
T Consensus       203 ~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  233 (255)
T PRK06463        203 RELFRNKTVLKTTGKPEDIANIVLFLASDDA  233 (255)
T ss_pred             HHHHHhCCCcCCCcCHHHHHHHHHHHcChhh
Confidence            3344566788899999999999999998754

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-31  Score=224.06  Aligned_cols=192  Identities=27%  Similarity=0.372  Sum_probs=165.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++   +.++..+.+|++|++++.++++++.+++|++|++|||||.... .++.+.+.++|++++++|+
T Consensus       300 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~  376 (520)
T PRK06484        300 DRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNL  376 (520)
T ss_pred             eCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCc
Confidence            67888888777655   4567789999999999999999999999999999999998643 5677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|+|.  +        .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus       377 ~~~~~~~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG  445 (520)
T PRK06484        377 SGAFACARAAARLMS--Q--------GGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWA-PAGIRVNTVAPG  445 (520)
T ss_pred             HHHHHHHHHHHHHhc--c--------CCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeC
Confidence            999999999999992  2        58999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCC-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++...... .......+....|++++.+|+|+|++++||+++.+
T Consensus       446 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~  493 (520)
T PRK06484        446 YIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAA  493 (520)
T ss_pred             CccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999987543221 11222344556788899999999999999999764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.9e-31  Score=204.48  Aligned_cols=198  Identities=19%  Similarity=0.126  Sum_probs=163.3

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCc----cEEEeCCCCCCC--CCCCCC-CHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKL----DILVNAAAGNFL--VPAEDL-SPNG   71 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i----d~lv~~ag~~~~--~~~~~~-~~~~   71 (208)
                      ++|++++++++.+++...  +.++.++.+|++|.++++++++++.+.+|.+    |++|||||....  ....+. +.++
T Consensus        34 ~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~  113 (256)
T TIGR01500        34 SARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ  113 (256)
T ss_pred             EEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHH
Confidence            368889999999988763  4568889999999999999999998877643    699999997543  223333 4689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508           72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus        72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                      |++++++|+.+++.+++.++|.|+++..      .+++||++||..+..+.+++..|+++|+|+++|+++|+.|+. ++|
T Consensus       114 ~~~~~~vN~~~~~~~~~~~~~~l~~~~~------~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~  186 (256)
T TIGR01500       114 VQNYWALNLTSMLCLTSSVLKAFKDSPG------LNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEK-NPN  186 (256)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHhhcCC------CCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence            9999999999999999999999986521      147899999999999999999999999999999999999998 889


Q ss_pred             eEEEEeecCcccCCCccCCC---ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          152 IRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       152 i~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|++|+||+++|++.....   ........+....|++|+.+|+|+|+.++||++.
T Consensus       187 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       187 VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             eEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc
Confidence            99999999999998654211   1122334455677889999999999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2.7e-31  Score=203.93  Aligned_cols=176  Identities=24%  Similarity=0.400  Sum_probs=153.2

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..++||++|++++.++++++.++++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|.+.+   
T Consensus        46 ~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---  122 (258)
T PRK06398         46 VDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD---  122 (258)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---
Confidence            56789999999999999999999999999999999987777888899999999999999999999999999998765   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC------ChHH
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEE  175 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------~~~~  175 (208)
                           .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++ |+||+|+||+++|++.....      .+..
T Consensus       123 -----~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~-~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~  195 (258)
T PRK06398        123 -----KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYA-PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEH  195 (258)
T ss_pred             -----CeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhC-CC-CEEEEEecCCccchHHhhhhhccccCChhh
Confidence                 68999999999999999999999999999999999999997 65 99999999999998654321      1111


Q ss_pred             H---HHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          176 I---RSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       176 ~---~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .   ...+....|+++..+|+|+|++++||+++.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~  230 (258)
T PRK06398        196 VERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLA  230 (258)
T ss_pred             hHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCccc
Confidence            1   1223345688899999999999999999764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.6e-31  Score=202.60  Aligned_cols=185  Identities=16%  Similarity=0.088  Sum_probs=159.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCC-CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.++++..+. ++.+++||++|+++++++++++.+.+|++|++|||+|........+.+.+.+.+++++|
T Consensus        29 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n  108 (246)
T PRK05599         29 AARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVD  108 (246)
T ss_pred             EeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHH
Confidence            37899999999999987654 47889999999999999999999999999999999998765555566778888999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+.+.+++.+.|.|.++..       +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+|++++|
T Consensus       109 ~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~-~~~I~v~~v~P  180 (246)
T PRK05599        109 YTAQVSMLTVLADELRAQTA-------PAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLH-GSHVRLIIARP  180 (246)
T ss_pred             HHhHHHHHHHHHHHHHhcCC-------CCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhc-CCCceEEEecC
Confidence            99999999999999986531       48999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|++.....             +.....+|+|+|+.++++++..
T Consensus       181 G~v~T~~~~~~~-------------~~~~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        181 GFVIGSMTTGMK-------------PAPMSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             CcccchhhcCCC-------------CCCCCCCHHHHHHHHHHHHhcC
Confidence            999998643211             1111358999999999998764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9e-31  Score=199.93  Aligned_cols=197  Identities=27%  Similarity=0.358  Sum_probs=171.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++.+++.++++..+.++.++.+|++|++++.++++++.+.++++|+||||+|.....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  115 (250)
T PRK08063         36 ARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAK  115 (250)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence            57888888888888877778889999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.+.+++++        .|+||++||..+..+.++...|+++|++++.|+++++.++. +.||+++.|+||+
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~pg~  186 (250)
T PRK08063        116 ALLFCAQEAAKLMEKVG--------GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA-PKGIAVNAVSGGA  186 (250)
T ss_pred             HHHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHh-HhCeEEEeEecCc
Confidence            99999999999998765        68999999998888888899999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +.|++..................+.+++.+++|+|+.+++++++++
T Consensus       187 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  232 (250)
T PRK08063        187 VDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEA  232 (250)
T ss_pred             ccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9988754433333333334445667788999999999999998753

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-30  Score=199.61  Aligned_cols=205  Identities=27%  Similarity=0.347  Sum_probs=174.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++..++...+.++..+.+|+++.+++.++++++.+.++++|++|||+|.....++.+.+.++|+.++++|+
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (258)
T PRK06949         39 ASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNT  118 (258)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcc
Confidence            36888889888888877666788999999999999999999999999999999999987767777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.++..+.......++||++||..+..+.+....|+++|+++..++++++.++. ++||+|+.|+||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pG  197 (258)
T PRK06949        119 RGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG-RHGINVNAICPG  197 (258)
T ss_pred             hhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeC
Confidence            9999999999999987653222222358999999999888888899999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++....... ..........|..+++.|+|+++.+.||+++.+
T Consensus       198 ~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~  243 (258)
T PRK06949        198 YIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES  243 (258)
T ss_pred             CCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence            9999875543322 223345566788899999999999999999765

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.2e-30  Score=198.10  Aligned_cols=193  Identities=25%  Similarity=0.240  Sum_probs=166.5

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++++++.++++..+.++.++.+|++|.+++.++++++.+.++++|++|||+|.....++.+.+.++|+.++++|+.+
T Consensus        31 ~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  110 (239)
T TIGR01831        31 SGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDG  110 (239)
T ss_pred             CCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence            34667788888887777789999999999999999999999999999999999998877777788999999999999999


Q ss_pred             HHHHHHHHHHHH-HhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           83 TFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        83 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      ++.+++.+++.+ .+++        .++||++||..+..+.+++..|+++|+++..++++++.|+. ++||+|+.|+||+
T Consensus       111 ~~~l~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  181 (239)
T TIGR01831       111 FYNVIHPCTMPMIRARQ--------GGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELA-KRKITVNCIAPGL  181 (239)
T ss_pred             HHHHHHHHHHHHHhhcC--------CeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEEcc
Confidence            999999886544 4333        58899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.....   ..........|+++..+|+|+++.++||+++.+
T Consensus       182 v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  224 (239)
T TIGR01831       182 IDTEMLAEVE---HDLDEALKTVPMNRMGQPAEVASLAGFLMSDGA  224 (239)
T ss_pred             Cccccchhhh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchh
Confidence            9998765321   112334456788999999999999999999865

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-31  Score=200.67  Aligned_cols=195  Identities=29%  Similarity=0.370  Sum_probs=167.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++.+|++|++++..+++.+.+.++++|++|||+|.....++.+.+.++|+.++++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (257)
T PRK07067         37 DIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVK  113 (257)
T ss_pred             cCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhh
Confidence            57777777776665   346888999999999999999999999999999999999887777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.+.|.++..       +++||++||..+..+.+++..|+++|+++..++++++.|+. ++||+|+.|+||+
T Consensus       114 ~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~  185 (257)
T PRK07067        114 GLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALI-RHGINVNAIAPGV  185 (257)
T ss_pred             hHHHHHHHHHHHHHhcCC-------CcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhc-ccCeEEEEEeeCc
Confidence            999999999999977531       47899999999888999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....         ..+.+.........|++++.+++|+|++++||+++.+
T Consensus       186 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  240 (257)
T PRK07067        186 VDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADA  240 (257)
T ss_pred             ccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            999864321         1122223344556789999999999999999999764

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=201.24  Aligned_cols=196  Identities=41%  Similarity=0.609  Sum_probs=167.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.++|+.++++|+.
T Consensus        40 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  119 (264)
T PRK07576         40 SRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLL  119 (264)
T ss_pred             eCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhH
Confidence            68888888888888776667888999999999999999999999999999999999776677788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.|.+.++         +|+||++||..+..+.+++..|+++|++++.|+++++.|+. ++||+|+.|+||+
T Consensus       120 g~~~l~~~~~~~l~~~---------~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~pg~  189 (264)
T PRK07576        120 GTFNVLKAAYPLLRRP---------GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG-PEGIRVNSIVPGP  189 (264)
T ss_pred             HHHHHHHHHHHHHHhC---------CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccc
Confidence            9999999999998754         47899999999888889999999999999999999999998 8899999999999


Q ss_pred             cc-CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++ |+..............+....|+++...|+|+|+.++||+++.+
T Consensus       190 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (264)
T PRK07576        190 IAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMA  236 (264)
T ss_pred             ccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhh
Confidence            97 44332222223333334455678889999999999999998754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-30  Score=200.34  Aligned_cols=194  Identities=27%  Similarity=0.421  Sum_probs=159.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+. ..+++.+++...+.++.++.+|+++.+++.++++++.+.++++|++|||||... ..++.+.+.++|++.+++|+
T Consensus        39 ~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~  117 (260)
T PRK12823         39 DRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSL  117 (260)
T ss_pred             eCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHh
Confidence            4654 355666777666677889999999999999999999999999999999999653 36777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|.+++        .++||++||..+..  ++...|+++|+|++.|+++++.|+. ++||+|+.|+||
T Consensus       118 ~~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  186 (260)
T PRK12823        118 FPTLWCCRAVLPHMLAQG--------GGAIVNVSSIATRG--INRVPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPG  186 (260)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCeEEEEcCccccC--CCCCccHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            999999999999998765        68999999987642  3456799999999999999999998 889999999999


Q ss_pred             cccCCCccCC-----CC------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSK-----LA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++....     ..      ...+........|++++++|+|+|++++||+|+.+
T Consensus       187 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  244 (260)
T PRK12823        187 GTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEA  244 (260)
T ss_pred             ccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence            9999852110     00      11223334456788899999999999999999764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.2e-30  Score=197.45  Aligned_cols=195  Identities=23%  Similarity=0.286  Sum_probs=168.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+..+.++..+++...+.++..+.+|++|.+++.++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  114 (246)
T PRK12938         35 GPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLT  114 (246)
T ss_pred             CCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            34556666677777766777888999999999999999999999999999999999877677788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.+.+++        .++||++||..+..+.+++..|+++|++++.|+++++.|+. ++||+++.|+||+
T Consensus       115 ~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~  185 (246)
T PRK12938        115 SLFNVTKQVIDGMVERG--------WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGY  185 (246)
T ss_pred             HHHHHHHHHHHHHHHcC--------CeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecc
Confidence            99999999999998765        58999999999988889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|+..... . .+.........|..+..+++|+++.++||+++.+
T Consensus       186 ~~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~  229 (246)
T PRK12938        186 IGTDMVKAI-R-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEES  229 (246)
T ss_pred             cCCchhhhc-C-hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCccc
Confidence            999865432 1 2222334445677888999999999999999864

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-30  Score=200.55  Aligned_cols=196  Identities=23%  Similarity=0.298  Sum_probs=165.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+ ..+..+++...+.++.++.+|++++++++++++++.++++++|++|||+|.....++.+.+.++++..+++|+.
T Consensus        37 ~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  115 (263)
T PRK08226         37 DISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIK  115 (263)
T ss_pred             cCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence            56654 44555666555667888999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-cccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.+++.+.+.+.+..        .++||++||..+ ..+.+++..|+++|+++++++++++.|+. ++||+|++|+||
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~i~pg  186 (263)
T PRK08226        116 GVWNVTKAVLPEMIARK--------DGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYA-QSGIRVNAICPG  186 (263)
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            99999999999987755        578999999877 45677889999999999999999999998 889999999999


Q ss_pred             cccCCCccCCC------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.....      ...+.........|++++.+|+|+|+.++||+++.+
T Consensus       187 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~  239 (263)
T PRK08226        187 YVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDES  239 (263)
T ss_pred             cccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchh
Confidence            99998654321      122333445556788899999999999999998754

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.2e-30  Score=199.61  Aligned_cols=180  Identities=28%  Similarity=0.394  Sum_probs=156.6

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++++|+++++++.++++.+.+.++++|++|||+|......+.+.+.+.|++++++|+.+++.+++.+.+.|.++.
T Consensus        46 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  125 (252)
T PRK07856         46 GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQP  125 (252)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            44677899999999999999999999999999999999987666777889999999999999999999999999998643


Q ss_pred             CCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                      .       .|+||++||..+..+.+++..|+++|+++++|++.++.|+. ++ |+|+.|+||+++|++............
T Consensus       126 ~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~  196 (252)
T PRK07856        126 G-------GGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWA-PK-VRVNAVVVGLVRTEQSELHYGDAEGIA  196 (252)
T ss_pred             C-------CcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-eEEEEEEeccccChHHhhhccCHHHHH
Confidence            1       58899999999999999999999999999999999999998 76 999999999999986543332333333


Q ss_pred             hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          179 KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ......|.++..+|+|+|+.++||+++.+
T Consensus       197 ~~~~~~~~~~~~~p~~va~~~~~L~~~~~  225 (252)
T PRK07856        197 AVAATVPLGRLATPADIAWACLFLASDLA  225 (252)
T ss_pred             HHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            45566788999999999999999999764

>TIGR02415 23BDH acetoin reductases

Probab=99.98  E-value=2.3e-30  Score=198.16  Aligned_cols=198  Identities=22%  Similarity=0.268  Sum_probs=171.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++..+.+|++|++++.++++.+.++++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        31 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (254)
T TIGR02415        31 DLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVK  110 (254)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence            57777888888888877777889999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|++++.       +++||++||..+..+.+.+..|+++|+++++|++.++.|+. +.||+|+.++||+
T Consensus       111 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~  182 (254)
T TIGR02415       111 GVLFGIQAAARQFKKQGH-------GGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELA-PKGITVNAYCPGI  182 (254)
T ss_pred             HHHHHHHHHHHHHHhCCC-------CeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCc
Confidence            999999999999987642       47899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCC---------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++......         ..+....+....+.+++.+|+|+++++.||+++.+
T Consensus       183 i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  237 (254)
T TIGR02415       183 VKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDS  237 (254)
T ss_pred             ccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhccccc
Confidence            99987533211         01122334556788899999999999999999864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.7e-30  Score=197.53  Aligned_cols=197  Identities=29%  Similarity=0.358  Sum_probs=169.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+.+...+.++.++.+|+++++++.++++++.+.++++|++|||||......+.+.+.++++.++++|+.
T Consensus        41 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  120 (263)
T PRK07814         41 ARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVA  120 (263)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcH
Confidence            67888888888888766677889999999999999999999999999999999999877777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|.+...       .++||++||..+..+.+++..|+++|++++.++++++.|+. + +|+|++|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~-~-~i~v~~i~Pg~  191 (263)
T PRK07814        121 TAHALTVAAVPLMLEHSG-------GGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLC-P-RIRVNAIAPGS  191 (263)
T ss_pred             HHHHHHHHHHHHHHhhcC-------CeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHHC-C-CceEEEEEeCC
Confidence            999999999999987421       58999999999999999999999999999999999999997 6 69999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++..................+..+..+++|+|+.++||+++.+
T Consensus       192 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  237 (263)
T PRK07814        192 ILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAG  237 (263)
T ss_pred             CcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9988654322223333444455677788999999999999998753

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.2e-30  Score=196.53  Aligned_cols=179  Identities=16%  Similarity=0.195  Sum_probs=151.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhC-CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|++++++++.+++...+.++..+++|++++++++++++++.+++| ++|++|||+|... ..++.+.+.++|.+.+++
T Consensus        35 ~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~  114 (227)
T PRK08862         35 CDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSS  114 (227)
T ss_pred             EcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHH
Confidence            37899999999999887777788899999999999999999999999 9999999998654 357788899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++.++|+|.+++.       +|+||++||..+.   +++..|+++|+|+.+|+++|+.|+. ++|||||+|+
T Consensus       115 ~~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~---~~~~~Y~asKaal~~~~~~la~el~-~~~Irvn~v~  183 (227)
T PRK08862        115 LASTLFTYGQVAAERMRKRNK-------KGVIVNVISHDDH---QDLTGVESSNALVSGFTHSWAKELT-PFNIRVGGVV  183 (227)
T ss_pred             hhHHHHHHHHHHHHHHHhcCC-------CceEEEEecCCCC---CCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEe
Confidence            999999999999999986531       5899999997543   5678899999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ||++.|+...   .+..+...            .+|++.+..||++.
T Consensus       184 PG~i~t~~~~---~~~~~~~~------------~~~~~~~~~~l~~~  215 (227)
T PRK08862        184 PSIFSANGEL---DAVHWAEI------------QDELIRNTEYIVAN  215 (227)
T ss_pred             cCcCcCCCcc---CHHHHHHH------------HHHHHhheeEEEec
Confidence            9999987322   12222111            17999999999974

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.97  E-value=7.8e-31  Score=201.77  Aligned_cols=191  Identities=25%  Similarity=0.330  Sum_probs=155.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCH----HHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSP----NGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~----~~~~~~~   76 (208)
                      +|+.++++++.+.   .+.++..+++|+++.+++.++++++.+.++++|++|||||.... .++.+.+.    ++|++++
T Consensus        36 ~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  112 (262)
T TIGR03325        36 DKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVF  112 (262)
T ss_pred             eCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhh
Confidence            5777766665442   24568889999999999999999999999999999999997532 33434333    5799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++++.|.|.+.         +|+||+++|..+..+.++...|+++|+|+++|+++++.|+. ++ ||||+
T Consensus       113 ~~N~~~~~~l~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~-irvn~  181 (262)
T TIGR03325       113 HINVKGYLLAVKAALPALVAS---------RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA-PY-VRVNG  181 (262)
T ss_pred             eeecHhHHHHHHHHHHHHhhc---------CCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhc-cC-eEEEE
Confidence            999999999999999999764         47799999999998888889999999999999999999998 76 99999


Q ss_pred             eecCcccCCCccCCC---ChH-----HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          157 IAPGPIKDTAGVSKL---APE-----EIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       157 v~pG~v~t~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+||+++|++.....   ...     ..........|++|+++|+|+|++++||+|+.
T Consensus       182 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       182 VAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             EecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCC
Confidence            999999998754211   110     11233345578999999999999999999973

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PLN02253 xanthoxin dehydrogenase

Probab=99.97  E-value=2.7e-30  Score=200.57  Aligned_cols=196  Identities=23%  Similarity=0.262  Sum_probs=160.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.+..+++.+++.. +.++.++++|++|.+++.++++.+.+.+|++|++|||||....  ..+.+.+.++|+.++++|
T Consensus        49 ~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N  127 (280)
T PLN02253         49 DLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVN  127 (280)
T ss_pred             eCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHh
Confidence            4666677777776632 4568899999999999999999999999999999999998643  457788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++++.+.|.++.        +|+||+++|..+..+.++...|+++|+|+++++++++.|+. ++||+|+.++|
T Consensus       128 ~~g~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~p  198 (280)
T PLN02253        128 VKGVFLGMKHAARIMIPLK--------KGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELG-KHGIRVNCVSP  198 (280)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEee
Confidence            9999999999999998765        68999999999988888888999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChH----HHHH----hhhhhhcC-CCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPE----EIRS----KATDYMAA-YKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~----~~~~----~~~~~~~~-~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++........    ....    ......++ ++...|+|++++++||+|+.+
T Consensus       199 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~  255 (280)
T PLN02253        199 YAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEA  255 (280)
T ss_pred             CcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCccc
Confidence            999998643322111    1111    11112232 456799999999999999764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=196.22  Aligned_cols=198  Identities=22%  Similarity=0.252  Sum_probs=167.9

Q ss_pred             CCcHHHHHHHHHHHHhcC--CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+..+++++.+++....  .++.++.+|+++.+++.++++++.+.++++|++|||+|.....++.+.+.++|++++++|
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n  112 (259)
T PRK12384         33 DINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVN  112 (259)
T ss_pred             ECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhc
Confidence            577888888887776542  468899999999999999999999999999999999998887788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+.+.+.+.|.+++.       .++||++||..+..+.+....|+++|+|+++++++++.|+. ++||+|+.|+|
T Consensus       113 ~~~~~~l~~~~~~~l~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~p  184 (259)
T PRK12384        113 LVGYFLCAREFSRLMIRDGI-------QGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLA-EYGITVHSLML  184 (259)
T ss_pred             cHHHHHHHHHHHHHHHhCCC-------CcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEec
Confidence            99999999999999987531       37899999998888888889999999999999999999998 88999999999


Q ss_pred             Ccc-cCCCccCCC---------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPI-KDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v-~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |.+ .+++.....         .+++....+....|++++.+++|++++++||+++.+
T Consensus       185 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~  242 (259)
T PRK12384        185 GNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKA  242 (259)
T ss_pred             CCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCccc
Confidence            976 444332211         123334445567889999999999999999998754

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=9.4e-30  Score=194.60  Aligned_cols=192  Identities=29%  Similarity=0.372  Sum_probs=160.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCC------CCCCCCCCHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNF------LVPAEDLSPNGFRTV   75 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~lv~~ag~~~------~~~~~~~~~~~~~~~   75 (208)
                      |+.++++++..++   +.++.++.+|+++++++.++++++.+.+|+ +|++|||+|...      ..++.+.+.++|+++
T Consensus        38 ~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~  114 (253)
T PRK08642         38 QSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQ  114 (253)
T ss_pred             CCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHH
Confidence            3455555554444   346888999999999999999999998887 999999998632      235677889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.+++.+.|.|..++        .++||++||..+..+..++..|+++|+|+++|++++++++. ++||+||
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~  185 (253)
T PRK08642        115 LEGSVKGALNTIQAALPGMREQG--------FGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVN  185 (253)
T ss_pred             HhhhhhHHHHHHHHHHHHHHhcC--------CeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhC-ccCeEEE
Confidence            99999999999999999997765        68999999988777777888999999999999999999998 8999999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+||+++|+...... ++.....+....|++++.+|+|+++++.||+++.+
T Consensus       186 ~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  236 (253)
T PRK08642        186 MVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWA  236 (253)
T ss_pred             EEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchh
Confidence            9999999997544322 23333445566788899999999999999999764

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=193.44  Aligned_cols=192  Identities=27%  Similarity=0.338  Sum_probs=167.7

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +....+++.+++...+.++.++.+|+++.+++.++++++.++++++|++|||+|.....++.+.+.++|++++++|+.++
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  118 (245)
T PRK12937         39 SAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGA  118 (245)
T ss_pred             CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHH
Confidence            45556777777777677889999999999999999999999999999999999987767778889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+++.+.+.|..          .++||++||..+..+.+++..|+++|++++.++++++.|+. +.||+++.++||++.
T Consensus       119 ~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-~~~i~v~~i~pg~~~  187 (245)
T PRK12937        119 FVVLREAARHLGQ----------GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELR-GRGITVNAVAPGPVA  187 (245)
T ss_pred             HHHHHHHHHHhcc----------CcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCcc
Confidence            9999999998854          47899999999888999999999999999999999999998 889999999999999


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++......+ .....+....|+.+..+++|+++.++||+++.+
T Consensus       188 t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  230 (245)
T PRK12937        188 TELFFNGKSA-EQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDG  230 (245)
T ss_pred             CchhcccCCH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9875443322 234456667788899999999999999998764

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.3e-30  Score=195.21  Aligned_cols=193  Identities=36%  Similarity=0.522  Sum_probs=162.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+. .+...++.  +.++..+.+|+++++++..+++++.+.++++|++|||+|.....++.+.+.++|+.++++|+.
T Consensus        46 ~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  122 (255)
T PRK06841         46 DRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLK  122 (255)
T ss_pred             eCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcH
Confidence            455543 23333332  345678999999999999999999999999999999999887677778889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|.+++        .++||++||..+..+.+.+..|+++|+++.+++++++.|+. ++||+|+.|+||+
T Consensus       123 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pg~  193 (255)
T PRK06841        123 GSFLMAQAVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG-PYGITVNAISPTV  193 (255)
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCc
Confidence            99999999999998765        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++...... ...........|.+++.+|+|+++.++||+++.+
T Consensus       194 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  238 (255)
T PRK06841        194 VLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLASDAA  238 (255)
T ss_pred             CcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99987543322 2222344556788899999999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=202.76  Aligned_cols=193  Identities=23%  Similarity=0.275  Sum_probs=166.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++.+|++|+++++++++.+.+++|++|++|||+|.....++.+.+.++|++++++|+
T Consensus        38 ~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~  117 (334)
T PRK07109         38 LARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTY  117 (334)
T ss_pred             EECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHh
Confidence            36889999999999988788899999999999999999999999999999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcC-CCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~gi~v~~v~p  159 (208)
                      .+++.+++.+++.|++++        .|+||++||..+..+.+.+..|+++|+++.+|+++++.|+.. ..+|+|+.|+|
T Consensus       118 ~g~~~~~~~~l~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~P  189 (334)
T PRK07109        118 LGVVHGTLAALRHMRPRD--------RGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQP  189 (334)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeC
Confidence            999999999999998875        689999999999999999999999999999999999999861 24799999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|+++....  ...   .....+..+..+|+|+|+++++++++.
T Consensus       190 g~v~T~~~~~~~--~~~---~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        190 PAVNTPQFDWAR--SRL---PVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCccCchhhhhh--hhc---cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999998543210  000   011223456789999999999999764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=193.00  Aligned_cols=199  Identities=27%  Similarity=0.395  Sum_probs=165.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      .|+.++++++.+++...+.++.+++||+++.+++.++++++.+.++++|++|||+|...+ ..+.+.+.++|+.++++|+
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~  113 (248)
T PRK06947         34 ARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV  113 (248)
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhcc
Confidence            467788888888887767788999999999999999999999989999999999998654 4567788999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+++.+++.+..++.++     +++||++||..+..+.+. +..|+++|+++++|+++++.++. ++||+|+.|+|
T Consensus       114 ~~~~~l~~~~~~~~~~~~~~~-----~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~-~~~i~v~~i~P  187 (248)
T PRK06947        114 LGAYLCAREAARRLSTDRGGR-----GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELG-PHGVRVNAVRP  187 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhh-hhCcEEEEEec
Confidence            999999999999987643111     478999999988877664 56899999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++......+ ..........|..+..+++|+++.++||+++.+
T Consensus       188 g~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        188 GLIETEIHASGGQP-GRAARLGAQTPLGRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             cCcccccccccCCH-HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999865432111 222233445677888999999999999999764

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.8e-30  Score=197.17  Aligned_cols=194  Identities=20%  Similarity=0.187  Sum_probs=161.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|.+++.++++++.+++|++|++|||||.....++.+.+.++|+.++++|+.
T Consensus        37 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~  116 (275)
T PRK05876         37 DVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLW  116 (275)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence            67888898888888777777889999999999999999999999999999999999887778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|.+++.       +|+||++||..+..+.++...|+++|+++.+|+++|+.|+. ++||+|+.|+||+
T Consensus       117 g~~~l~~~~~p~m~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~  188 (275)
T PRK05876        117 GSIHTVEAFLPRLLEQGT-------GGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT-ADGIGVSVLCPMV  188 (275)
T ss_pred             HHHHHHHHHHHHHHhcCC-------CCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCc
Confidence            999999999999987642       47899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCCh--HHHH----Hhhhhhhc-CCCCCCHHHHHHHHHHhc
Q 028508          162 IKDTAGVSKLAP--EEIR----SKATDYMA-AYKFGEKWDIAMAALYLA  203 (208)
Q Consensus       162 v~t~~~~~~~~~--~~~~----~~~~~~~~-~~~~~~~~dva~~~~~L~  203 (208)
                      ++|++.......  ....    .......+ .....+|+|+|+.++..+
T Consensus       189 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai  237 (275)
T PRK05876        189 VETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAI  237 (275)
T ss_pred             cccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence            999865432100  0000    00001111 234679999999988654

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=195.01  Aligned_cols=195  Identities=27%  Similarity=0.343  Sum_probs=168.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++.+|++|.+++..+++++.+.++++|++|||+|...+ .++.+.+.++|+.++++|+
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~  115 (258)
T PRK07890         36 ARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNV  115 (258)
T ss_pred             eCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhh
Confidence            588888888888887767788999999999999999999999999999999999998654 5677788999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++++.+.|.+.         +++||++||..+..+.+++..|+++|++++.++++++.|+. ++||+++.++||
T Consensus       116 ~~~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~-~~~i~v~~v~pg  185 (258)
T PRK07890        116 LGTLRLTQAFTPALAES---------GGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELG-PQGIRVNSVAPG  185 (258)
T ss_pred             HHHHHHHHHHHHHHHhC---------CCEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeCC
Confidence            99999999999998764         46899999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|+.....         ..............+.+++.+++|++++++||+++.
T Consensus       186 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~  240 (258)
T PRK07890        186 YIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDL  240 (258)
T ss_pred             ccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHh
Confidence            9999864321         112233334445577888999999999999999864

>PRK05855 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.2e-29  Score=214.82  Aligned_cols=197  Identities=19%  Similarity=0.192  Sum_probs=168.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.++++..+.++.++.+|++|++++.++++++.+.+|++|++|||||......+.+.+.++|++++++|+
T Consensus       345 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~  424 (582)
T PRK05855        345 SDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNL  424 (582)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhh
Confidence            36889999999999987777889999999999999999999999999999999999998877888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.+++.+.|.|++++.       +|+||++||.++..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||
T Consensus       425 ~g~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg  496 (582)
T PRK05855        425 WGVIHGCRLFGRQMVERGT-------GGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELA-AAGIGVTAICPG  496 (582)
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeC
Confidence            9999999999999988642       47999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCCh----HH--HHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          161 PIKDTAGVSKLAP----EE--IRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       161 ~v~t~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+|++......+    +.  .........+..+..+|+++|+.++++++.
T Consensus       497 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~  547 (582)
T PRK05855        497 FVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKR  547 (582)
T ss_pred             CCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHc
Confidence            9999876543211    10  011111222333456899999999999865

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.7e-29  Score=192.55  Aligned_cols=183  Identities=23%  Similarity=0.300  Sum_probs=159.2

Q ss_pred             HHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 028508           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA   90 (208)
Q Consensus        11 ~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   90 (208)
                      +.+++...+.+++++.+|+++.+++..+++++.+.++++|++|||+|.....++.+.+.++++..+++|+.+++.+.+.+
T Consensus        58 ~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  137 (256)
T PRK12748         58 LKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAF  137 (256)
T ss_pred             HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            55666655667899999999999999999999999999999999999877777888899999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC
Q 028508           91 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (208)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~  170 (208)
                      .+.|.+..        .++||++||..+..+.++...|+++|+++++++++++.|+. ++||+|+.++||+++|+.... 
T Consensus       138 ~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~~~t~~~~~-  207 (256)
T PRK12748        138 AKQYDGKA--------GGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELA-EKGITVNAVNPGPTDTGWITE-  207 (256)
T ss_pred             HHHhhhcC--------CeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCcccCCCCCh-
Confidence            99987654        68999999999888888999999999999999999999998 889999999999999875432 


Q ss_pred             CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                          ..........+..+...|+|+|+.+.||+++.+
T Consensus       208 ----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  240 (256)
T PRK12748        208 ----ELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEA  240 (256)
T ss_pred             ----hHHHhhhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence                222333445566778899999999999999864

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-29  Score=190.57  Aligned_cols=198  Identities=28%  Similarity=0.364  Sum_probs=165.6

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~   81 (208)
                      |+.++.++..+++...+.++.++++|++|.+++.++++++.++++++|++|||+|...+ ..+.+.+.++|+.++++|+.
T Consensus        35 ~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~  114 (248)
T PRK06123         35 RNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVV  114 (248)
T ss_pred             CCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            56677777777787667778899999999999999999999999999999999998754 45677889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.+++.+++.+.++..+     .+|+||++||..+..+.++ +..|+++|++++.|++.++.|+. ++||+|+.|+||
T Consensus       115 ~~~~l~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~~~i~v~~i~pg  188 (248)
T PRK06123        115 GSFLCAREAVKRMSTRHGG-----RGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVA-AEGIRVNAVRPG  188 (248)
T ss_pred             HHHHHHHHHHHHHHhcCCC-----CCeEEEEECchhhcCCCCCCccchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            9999999999998764211     1478999999988887776 46799999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .+.|++......+ ..........|+++..+++|++++++||+++.+
T Consensus       189 ~v~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~  234 (248)
T PRK06123        189 VIYTEIHASGGEP-GRVDRVKAGIPMGRGGTAEEVARAILWLLSDEA  234 (248)
T ss_pred             cccCchhhccCCH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999864432222 233345556788888999999999999998753

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=196.21  Aligned_cols=183  Identities=27%  Similarity=0.306  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (208)
                      +++++.+++...+.++.++.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.+++.+
T Consensus        49 ~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l  128 (273)
T PRK08278         49 TIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLV  128 (273)
T ss_pred             HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHH
Confidence            35666777777777889999999999999999999999999999999999987777788889999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC-ccc
Q 028508           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIK  163 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG-~v~  163 (208)
                      ++++.|.|+++.        +++||+++|..+..+.  +++..|+++|+++++|+++++.|+. ++||+|+.|+|| +++
T Consensus       129 ~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~I~v~~i~Pg~~i~  199 (273)
T PRK08278        129 SQACLPHLKKSE--------NPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIA  199 (273)
T ss_pred             HHHHHHHHHhcC--------CCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeCCCccc
Confidence            999999998765        6899999998877776  8889999999999999999999998 899999999999 577


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+.......         ...+..+..+|+++|+.+++|+++.+
T Consensus       200 t~~~~~~~~---------~~~~~~~~~~p~~va~~~~~l~~~~~  234 (273)
T PRK08278        200 TAAVRNLLG---------GDEAMRRSRTPEIMADAAYEILSRPA  234 (273)
T ss_pred             cHHHHhccc---------ccccccccCCHHHHHHHHHHHhcCcc
Confidence            764322111         12244567899999999999998754

>PRK06484 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.1e-29  Score=212.82  Aligned_cols=195  Identities=29%  Similarity=0.376  Sum_probs=164.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++   +.++..+++|++|+++++++++.+.+++|++|+||||||+..  ..++.+.+.++|++++++|
T Consensus        36 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n  112 (520)
T PRK06484         36 DRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAIN  112 (520)
T ss_pred             eCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHh
Confidence            57888877776665   556788999999999999999999999999999999999843  2466788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++++++|+|++++.       +++||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+|+.|+|
T Consensus       113 ~~~~~~l~~~~~~~~~~~~~-------g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~i~v~~i~P  184 (520)
T PRK06484        113 LTGAYLVAREALRLMIEQGH-------GAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA-AKGIRVNAVLP  184 (520)
T ss_pred             hHHHHHHHHHHHHHHHhcCC-------CCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEcc
Confidence            99999999999999987541       24999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHH-HHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++......... .........|.++..+|+|+++.+.||+++.+
T Consensus       185 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~  233 (520)
T PRK06484        185 GYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQA  233 (520)
T ss_pred             CCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999987543221111 11223345677788999999999999998754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-29  Score=190.35  Aligned_cols=196  Identities=30%  Similarity=0.306  Sum_probs=172.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++++..++++..+.++.++.+|++|.+++.++++++.+.++++|++|||+|......+.+.+.++|+..++.|+.
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  117 (250)
T PRK12939         38 DGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVR  117 (250)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            57888888888888776778899999999999999999999999999999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.+.+++        .|+||++||..+..+.+....|+++|++++.+++.++.++. ++||+|+.|+||+
T Consensus       118 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~  188 (250)
T PRK12939        118 GTFLMLRAALPHLRDSG--------RGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELG-GRGITVNAIAPGL  188 (250)
T ss_pred             HHHHHHHHHHHHHHHcC--------CeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCEEEEEEEECC
Confidence            99999999999998765        68999999999999989999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++...... ..+...+....+..++.+++|+++++++|+++.+
T Consensus       189 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  233 (250)
T PRK12939        189 TATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAA  233 (250)
T ss_pred             CCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            99987654322 1333445556778889999999999999998653

>PLN00015 protochlorophyllide reductase

Probab=99.97  E-value=2.4e-29  Score=197.66  Aligned_cols=200  Identities=14%  Similarity=0.068  Sum_probs=157.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++++|++|.++++++++++.+.++++|++|||||+..+ .++.+.+.++|++++++|+
T Consensus        29 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~  108 (308)
T PLN00015         29 CRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNH  108 (308)
T ss_pred             eCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHh
Confidence            688888888888876545578889999999999999999999888899999999998643 3556788999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------------------------------CCch
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------------------------------TWYQ  125 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------------------------------~~~~  125 (208)
                      .|++.+++.++|.|++.+.      .+|+||++||..+..+                                   ..++
T Consensus       109 ~g~~~l~~~~lp~l~~~~~------~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (308)
T PLN00015        109 LGHFLLSRLLLDDLKKSDY------PSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGA  182 (308)
T ss_pred             HHHHHHHHHHHHHHHhCCC------CCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHH
Confidence            9999999999999987530      0378999999876421                                   1246


Q ss_pred             hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc-cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       126 ~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      ..|++||+|+..+++.+++++....||+|++|+||+| .|++..................+.++..+|++.|+.+++|++
T Consensus       183 ~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~  262 (308)
T PLN00015        183 KAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVS  262 (308)
T ss_pred             HHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhcc
Confidence            7799999998899999999996236999999999999 677654322111111111223455678899999999999998


Q ss_pred             CCC
Q 028508          205 DAV  207 (208)
Q Consensus       205 ~~a  207 (208)
                      +.+
T Consensus       263 ~~~  265 (308)
T PLN00015        263 DPS  265 (308)
T ss_pred             ccc
Confidence            754

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-29  Score=195.09  Aligned_cols=194  Identities=29%  Similarity=0.341  Sum_probs=164.4

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+. +.+++..+.+...+.++.++.+|+++.+++.++++++.+.++++|++|||||.... ..+.+.+.++|+.++++|
T Consensus        77 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N  156 (290)
T PRK06701         77 YLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTN  156 (290)
T ss_pred             eCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhh
Confidence            3443 34566666666656678899999999999999999999999999999999997643 567788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++++.+.|..          .++||++||..+..+.++...|+++|+|++.++++++.++. ++||+|++|+|
T Consensus       157 ~~~~~~l~~a~~~~~~~----------~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~p  225 (290)
T PRK06701        157 IYSYFHMTKAALPHLKQ----------GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAP  225 (290)
T ss_pred             hHHHHHHHHHHHHHHhh----------CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEec
Confidence            99999999999998854          47899999999998888999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++......+ +....+....+++++..++|+|++++||+++.+
T Consensus       226 G~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~  272 (290)
T PRK06701        226 GPIWTPLIPSDFDE-EKVSQFGSNTPMQRPGQPEELAPAYVFLASPDS  272 (290)
T ss_pred             CCCCCcccccccCH-HHHHHHHhcCCcCCCcCHHHHHHHHHHHcCccc
Confidence            99999865433222 223344556688889999999999999999864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.97  E-value=3.8e-29  Score=190.93  Aligned_cols=197  Identities=23%  Similarity=0.321  Sum_probs=172.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++.+++.+++...+.++..+.+|+++.++++++++.+.+.++++|++|||+|.....++.+.+.++|+.++++|+.
T Consensus        34 ~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (250)
T TIGR03206        34 DLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLT  113 (250)
T ss_pred             cCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            57888888888888776778889999999999999999999999999999999999876677778889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+.+.+.+.|.+.+        .++||++||..+..+.++...|+++|+|+..++++++.++. +.|++++.++||+
T Consensus       114 ~~~~l~~~~~~~~~~~~--------~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~  184 (250)
T TIGR03206       114 GALHMHHAVLPGMVERG--------AGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHA-RHGITVNVVCPGP  184 (250)
T ss_pred             HHHHHHHHHHHHHHhcC--------CeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEecCc
Confidence            99999999999998765        68899999999999999999999999999999999999998 7899999999999


Q ss_pred             ccCCCccCC----CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....    ..+......+....|.++..+++|+|++++||+++++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  234 (250)
T TIGR03206       185 TDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDA  234 (250)
T ss_pred             ccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCccc
Confidence            999865432    1223344556667788889999999999999998764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07069 short chain dehydrogenase; Validated

Probab=99.97  E-value=3e-29  Score=191.56  Aligned_cols=197  Identities=28%  Similarity=0.336  Sum_probs=166.4

Q ss_pred             CCc-HHHHHHHHHHHHhcC-C-CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            2 GRR-KTVLRSAVAALHSLG-I-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~-~~~~~~~~~~l~~~~-~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+ .++++++.+++.... . .+..+++|++|.+++.++++++.+.++++|++|||+|......+.+.+.+++++++++
T Consensus        30 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~  109 (251)
T PRK07069         30 DINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAI  109 (251)
T ss_pred             eCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence            465 667777777776542 2 3456899999999999999999999999999999999887777888899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCC--CeEEEE
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY--AIRVNG  156 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~--gi~v~~  156 (208)
                      |+.+++.+++.+++.|.+++        .++||++||..+..+.+++..|+++|++++.++++++.|+. ++  +|+|+.
T Consensus       110 n~~~~~~~~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~~i~v~~  180 (251)
T PRK07069        110 NVESIFLGCKHALPYLRASQ--------PASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCA-RRGLDVRCNS  180 (251)
T ss_pred             hhHHHHHHHHHHHHHHhhcC--------CcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCCcEEEEE
Confidence            99999999999999998765        68899999999999999999999999999999999999997 55  599999


Q ss_pred             eecCcccCCCccCCC---ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+++|++.....   .............|..++.+++|++++++||+++.+
T Consensus       181 v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  234 (251)
T PRK07069        181 IHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDES  234 (251)
T ss_pred             EeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999999998764321   222333344556777889999999999999998764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.97  E-value=8.2e-30  Score=196.45  Aligned_cols=178  Identities=29%  Similarity=0.374  Sum_probs=150.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---------PAEDLSPNGFRTVIEIDSVGTFIMCHEAL   91 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   91 (208)
                      ++..+++|++|+++++++++++.+.++++|++|||||...+.         ++.+.+.++|++++++|+.+++.+++++.
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (266)
T PRK06171         50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVA  129 (266)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHH
Confidence            456788999999999999999999999999999999975432         23457899999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc-CCCccCC
Q 028508           92 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSK  170 (208)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~-t~~~~~~  170 (208)
                      ++|.+++        .++||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||.|+||+++ |++....
T Consensus       130 ~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~~~~t~~~~~~  200 (266)
T PRK06171        130 RQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELG-KHNIRVVGVAPGILEATGLRTPE  200 (266)
T ss_pred             HHHHhcC--------CcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccccccCCCcChh
Confidence            9998765        68999999999999999999999999999999999999998 899999999999997 4432211


Q ss_pred             C----------ChHHHHHhhhh--hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          171 L----------APEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       171 ~----------~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .          ...+....+..  ..|++|.++|+|+|+++.||+|+.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~  249 (266)
T PRK06171        201 YEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRA  249 (266)
T ss_pred             hhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeecccc
Confidence            0          11222233333  6789999999999999999999865

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-29  Score=191.15  Aligned_cols=192  Identities=24%  Similarity=0.301  Sum_probs=162.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++++|++|.+++..+++.+.+.++++|++|||+|.....++.+.+.++|+.++++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (249)
T PRK06500         37 GRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVK  113 (249)
T ss_pred             cCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            57776666665554   557888999999999999999999999999999999999877667778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.|.|..          .+++|+++|..+..+.+....|+++|++++.++++++.|+. ++||+++.++||+
T Consensus       114 ~~~~l~~~~~~~~~~----------~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~  182 (249)
T PRK06500        114 GPYFLIQALLPLLAN----------PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELL-PRGIRVNAVSPGP  182 (249)
T ss_pred             HHHHHHHHHHHHHhc----------CCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCc
Confidence            999999999998854          46799999988888889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCC-C---hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKL-A---PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++..... .   ............|+.++.+++|++++++||+++.+
T Consensus       183 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  232 (249)
T PRK06500        183 VQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDES  232 (249)
T ss_pred             CCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9998654211 1   12222334455678889999999999999998754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.5e-29  Score=192.29  Aligned_cols=195  Identities=19%  Similarity=0.152  Sum_probs=166.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|+++++++..+++.+.++++++|++|||+|......+.+.+.++|++++++|+.
T Consensus        31 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (270)
T PRK05650         31 DVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLM  110 (270)
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccH
Confidence            57888889888888877778889999999999999999999999999999999999888777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|.+++        .++||++||..+..+.++.+.|+++|+++++|+++++.|+. ++||+++.|+||+
T Consensus       111 ~~~~~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~  181 (270)
T PRK05650        111 GVVKGCKAFLPLFKRQK--------SGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELA-DDEIGVHVVCPSF  181 (270)
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCc
Confidence            99999999999998765        68899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++|++......................+.+++|+|+.++..+.+
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        182 FQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             cccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            99987654322111111111222223457999999999988765

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=7.2e-29  Score=189.15  Aligned_cols=193  Identities=34%  Similarity=0.456  Sum_probs=167.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.+..+++.+++...+.++.++.+|+++++++.++++++.+.++++|++|||+|...+..+.+.+.+.++.++++|+.+
T Consensus        39 ~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  118 (247)
T PRK12935         39 SSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSS  118 (247)
T ss_pred             CcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence            55677778888887767789999999999999999999999999999999999998877677778889999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++.+.|.+.+..        .++||++||..+..+.+++..|+++|+++++++++++.|+. +.||+++.++||++
T Consensus       119 ~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v  189 (247)
T PRK12935        119 VFNTTSAVLPYITEAE--------EGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFI  189 (247)
T ss_pred             HHHHHHHHHHHHHHcC--------CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCC
Confidence            9999999999998765        67899999999888888999999999999999999999998 88999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +|++....  +...........+.+++..++|++++++|++++.
T Consensus       190 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~  231 (247)
T PRK12935        190 DTEMVAEV--PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDG  231 (247)
T ss_pred             cChhhhhc--cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            98765432  2223334445566778899999999999999753

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.3e-29  Score=192.21  Aligned_cols=194  Identities=26%  Similarity=0.258  Sum_probs=160.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++ ++.+++...+.++.++.+|+++.+++.++++++.+.++++|++|||+|......+.+.. ++|+..+++|+.
T Consensus        38 ~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~  115 (258)
T PRK08628         38 GRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLI  115 (258)
T ss_pred             cCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhH
Confidence            5677666 77777777777889999999999999999999999999999999999976554444444 899999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.+...         .++||++||..+..+.+++..|+++|++++.++++++.|+. ++||+|+.|+||.
T Consensus       116 ~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~pg~  185 (258)
T PRK08628        116 HYYVMAHYCLPHLKAS---------RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALA-KDGVRVNAVIPAE  185 (258)
T ss_pred             HHHHHHHHHHHHhhcc---------CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCc
Confidence            9999999999988653         47899999999999989999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCC----CChHHHHHhhhhhhcCC-CCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK----LAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....    ..............+.. ++.+|+|+|++++||+++.+
T Consensus       186 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (258)
T PRK08628        186 VMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERS  236 (258)
T ss_pred             cCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhh
Confidence            999864321    11111222223344553 78899999999999998764

>PRK05717 oxidoreductase; Validated

Probab=99.97  E-value=7.2e-29  Score=190.12  Aligned_cols=191  Identities=24%  Similarity=0.296  Sum_probs=158.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++.+++.+++   +.++.++++|+++.+++.++++++.+++|++|++|||||...+  .++.+.+.++|+..+++|
T Consensus        41 ~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  117 (255)
T PRK05717         41 DLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVN  117 (255)
T ss_pred             cCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHh
Confidence            46666665554443   4568889999999999999999999999999999999998753  466778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++++.|.|.+.         .++||++||..+..+.+.+..|+++|++++.++++++.++. + +|+|+.|+|
T Consensus       118 ~~~~~~l~~~~~~~~~~~---------~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~-~i~v~~i~P  186 (255)
T PRK05717        118 LTGPMLLAKHCAPYLRAH---------NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLG-P-EIRVNAVSP  186 (255)
T ss_pred             hHHHHHHHHHHHHHHHHc---------CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-C-CCEEEEEec
Confidence            999999999999998764         47899999999998888999999999999999999999997 5 599999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++..... ............|.++.++|+|++.+++||+++.+
T Consensus       187 g~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  233 (255)
T PRK05717        187 GWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQA  233 (255)
T ss_pred             ccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            999998643321 11222223345677899999999999999998753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=189.53  Aligned_cols=195  Identities=34%  Similarity=0.480  Sum_probs=166.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++...+++...+.++.++++|++|+++++++++++.+.++++|++|||+|.....+..+.+.+.|++++++|+.
T Consensus        43 ~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  122 (259)
T PRK08213         43 ARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVR  122 (259)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhH
Confidence            67888888888888777777889999999999999999999999999999999999876667777889999999999999


Q ss_pred             HHHHHHHHHHHH-HHhcCCCCCCCCCCceEEEeccccccccCCc----hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           82 GTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        82 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      +++.+++++.++ +.+++        .++||++||..+..+.++    ...|+++|++++.++++++.++. ++||+++.
T Consensus       123 ~~~~l~~~~~~~~l~~~~--------~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~-~~gi~v~~  193 (259)
T PRK08213        123 GLFLLSQAVAKRSMIPRG--------YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVNA  193 (259)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhc-ccCEEEEE
Confidence            999999999998 66544        578999999877765543    48899999999999999999998 88999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++||+++|++.....  ...........|..++++++|+++.+.||+++.+
T Consensus       194 v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  242 (259)
T PRK08213        194 IAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDAS  242 (259)
T ss_pred             EecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999988644322  1223335556778889999999999999998765

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=192.11  Aligned_cols=190  Identities=22%  Similarity=0.342  Sum_probs=153.8

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.+.++++.+++...+.++.++++|+++++++.++++++.+.++++|++|||||.....++.+.+.++|++++++|+.++
T Consensus        45 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~  124 (257)
T PRK12744         45 SKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSA  124 (257)
T ss_pred             chHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHH
Confidence            45567777777776666788999999999999999999999999999999999987777778889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEe-ccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~i-ss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      +.+++.+.|.|.+          .++++++ +|..+ .+.+++..|+++|+|++.|+++++.|+. ++||+|+.++||++
T Consensus       125 ~~~~~~~~~~~~~----------~~~iv~~~ss~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v  192 (257)
T PRK12744        125 FFFIKEAGRHLND----------NGKIVTLVTSLLG-AFTPFYSAYAGSKAPVEHFTRAASKEFG-ARGISVTAVGPGPM  192 (257)
T ss_pred             HHHHHHHHHhhcc----------CCCEEEEecchhc-ccCCCcccchhhHHHHHHHHHHHHHHhC-cCceEEEEEecCcc
Confidence            9999999998864          3567776 44433 3467788999999999999999999998 88999999999999


Q ss_pred             cCCCccCCCChHHHH--HhhhhhhcCC--CCCCHHHHHHHHHHhcCC
Q 028508          163 KDTAGVSKLAPEEIR--SKATDYMAAY--KFGEKWDIAMAALYLASD  205 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~dva~~~~~L~s~  205 (208)
                      .|++...........  .......++.  ++.+++|++++++||+++
T Consensus       193 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  239 (257)
T PRK12744        193 DTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD  239 (257)
T ss_pred             ccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc
Confidence            998654322211110  1111223333  688999999999999985

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.97  E-value=6.5e-29  Score=191.60  Aligned_cols=198  Identities=19%  Similarity=0.238  Sum_probs=153.9

Q ss_pred             CcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHH----HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCH--------
Q 028508            3 RRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDA----VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP--------   69 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~----~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~--------   69 (208)
                      |+.++++++.+++... +.++..+.+|++|++++    .++++.+.+.+|++|+||||||...+.++.+.+.        
T Consensus        34 ~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~  113 (267)
T TIGR02685        34 RSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKK  113 (267)
T ss_pred             CcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccch
Confidence            4567788888887643 45677899999999866    5556666677899999999999866555544443        


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHh
Q 028508           70 ---NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        70 ---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                         ++|.+++++|+.+++.+++.+.|.++....  ......+.||+++|..+..+.+++..|+++|+|+++|+++++.|+
T Consensus       114 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~  191 (267)
T TIGR02685       114 SLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRA--EQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALEL  191 (267)
T ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHhhhccc--ccCCCCeEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHH
Confidence               358999999999999999999999865321  011224789999999998888999999999999999999999999


Q ss_pred             cCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCC-CCCCHHHHHHHHHHhcCCCC
Q 028508          147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       147 ~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~a  207 (208)
                      . ++||+|+.|+||+++++...   . ......+....|+. +..+|+|+++.++||+++.+
T Consensus       192 ~-~~gi~v~~v~PG~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  248 (267)
T TIGR02685       192 A-PLQIRVNGVAPGLSLLPDAM---P-FEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKA  248 (267)
T ss_pred             h-hhCeEEEEEecCCccCcccc---c-hhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCccc
Confidence            8 89999999999999876321   1 12223333445664 67899999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.97  E-value=5e-29  Score=188.90  Aligned_cols=172  Identities=19%  Similarity=0.202  Sum_probs=147.2

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +.++.+|++|.+++.++++++.+.++++|++|||||........+.+.++|++++++|+.+++.+++.+.|.|.+...  
T Consensus        48 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~--  125 (236)
T PRK06483         48 AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH--  125 (236)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC--
Confidence            577899999999999999999999999999999999865555567789999999999999999999999999976431  


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhh
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  181 (208)
                          ..++||++||..+..+.+++..|+++|+++++|+++++.|+. + +||||+|+||++.++..    .+........
T Consensus       126 ----~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~-~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~  195 (236)
T PRK06483        126 ----AASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLA-P-EVKVNSIAPALILFNEG----DDAAYRQKAL  195 (236)
T ss_pred             ----CCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHC-C-CcEEEEEccCceecCCC----CCHHHHHHHh
Confidence                137899999999888888999999999999999999999997 6 59999999999976532    1222333444


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ...|++|...|+|+++.+.||++.
T Consensus       196 ~~~~~~~~~~~~~va~~~~~l~~~  219 (236)
T PRK06483        196 AKSLLKIEPGEEEIIDLVDYLLTS  219 (236)
T ss_pred             ccCccccCCCHHHHHHHHHHHhcC
Confidence            567888999999999999999973

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.1e-29  Score=188.59  Aligned_cols=190  Identities=24%  Similarity=0.280  Sum_probs=164.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++.+++.+++...+.++.++.+|+++++++.++++.+.+.++++|++|||+|.....++.+.+.++++.++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  115 (241)
T PRK07454         36 VARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNL  115 (241)
T ss_pred             EeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhcc
Confidence            36888888888888877667888999999999999999999999999999999999987777777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.+++        .++||++||..+..+.+++..|+++|++++.++++++.++. ++||+++.|+||
T Consensus       116 ~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~-~~gi~v~~i~pg  186 (241)
T PRK07454        116 TSVFQCCSAVLPGMRARG--------GGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEER-SHGIRVCTITLG  186 (241)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEecC
Confidence            999999999999998765        68999999999988899999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.......        ......+..+++|+|+++++|++++.
T Consensus       187 ~i~t~~~~~~~~~--------~~~~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        187 AVNTPLWDTETVQ--------ADFDRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             cccCCcccccccc--------cccccccCCCHHHHHHHHHHHHcCCc
Confidence            9999864321110        11112346799999999999999764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.97  E-value=1.1e-28  Score=187.80  Aligned_cols=192  Identities=24%  Similarity=0.270  Sum_probs=163.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+.+   +.++.++.+|+++.+++.++++++.+.++++|++|||+|...+.++.+.+.++|+.++++|+.
T Consensus        37 ~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (245)
T PRK12936         37 GTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLT  113 (245)
T ss_pred             cCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccH
Confidence            46667776665544   456788999999999999999999999999999999999877777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.+.++.        .++||++||..+..+.+....|+++|+++.++++.++.++. +.|++++.++||+
T Consensus       114 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~  184 (245)
T PRK12936        114 ATFRLTRELTHPMMRRR--------YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIA-TRNVTVNCVAPGF  184 (245)
T ss_pred             HHHHHHHHHHHHHHHhC--------CCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECc
Confidence            99999999999887655        68899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.... . ...........|..++.+++|+++++.||+++.+
T Consensus       185 ~~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~  228 (245)
T PRK12936        185 IESAMTGKL-N-DKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEA  228 (245)
T ss_pred             CcCchhccc-C-hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence            998754332 1 2222333455678889999999999999998753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=9.6e-29  Score=194.08  Aligned_cols=194  Identities=22%  Similarity=0.309  Sum_probs=157.8

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.+.++++.++++..+.++..+.+|++|.+++.++++.+.+ +|++|++|||||...+..+.+.+.++|+.++++|+.++
T Consensus        46 ~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~  124 (306)
T PRK07792         46 SALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGH  124 (306)
T ss_pred             chhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHH
Confidence            34567788888887777899999999999999999999998 99999999999998877788899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+++.+.++|+++.... .....|+||++||..+..+.+++..|+++|++++.|+++++.|+. ++||+||+|+||. .
T Consensus       125 ~~l~~~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~i~Pg~-~  201 (306)
T PRK07792        125 FLLTRNAAAYWRAKAKAA-GGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALG-RYGVRANAICPRA-R  201 (306)
T ss_pred             HHHHHHHHHHHHHhhccc-CCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEECCCC-C
Confidence            999999999997542110 011137999999999998889999999999999999999999998 8999999999994 6


Q ss_pred             CCCccCCCCh-HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++....... ....   .   ....+.+|+|++..+.||+++.+
T Consensus       202 t~~~~~~~~~~~~~~---~---~~~~~~~pe~va~~v~~L~s~~~  240 (306)
T PRK07792        202 TAMTADVFGDAPDVE---A---GGIDPLSPEHVVPLVQFLASPAA  240 (306)
T ss_pred             Cchhhhhccccchhh---h---hccCCCCHHHHHHHHHHHcCccc
Confidence            6653321110 1000   0   11234589999999999999754

>PRK06182 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.1e-28  Score=190.81  Aligned_cols=189  Identities=24%  Similarity=0.229  Sum_probs=158.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.    .  ..+.++.+|++|.+++..+++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        34 ~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  107 (273)
T PRK06182         34 ARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLF  107 (273)
T ss_pred             eCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhH
Confidence            56776665432    2  23778999999999999999999999999999999999987778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .|+||++||..+..+.+....|+++|+++++|+++++.|+. ++||+|+.|+||+
T Consensus       108 ~~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~  178 (273)
T PRK06182        108 GAARLTQLVLPHMRAQR--------SGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVA-PFGIDVVVIEPGG  178 (273)
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhc-ccCCEEEEEecCC
Confidence            99999999999998865        68999999998888888888999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCC---------C-hHH----HHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKL---------A-PEE----IRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~---------~-~~~----~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++|++.....         . ...    ....+....+.++..+|+|+|++++++++.
T Consensus       179 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        179 IKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             cccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence            9998642110         0 001    112333445677889999999999999874

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-28  Score=189.21  Aligned_cols=178  Identities=21%  Similarity=0.259  Sum_probs=150.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ++.++++|++|.+++.++++++.+.++++|++|||||...  ..++.+.+.++|+.++++|+.+++.+++.++|.|.+++
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  129 (260)
T PRK06523         50 GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG  129 (260)
T ss_pred             ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999753  34567788999999999999999999999999998765


Q ss_pred             CCCCCCCCCceEEEeccccccccCC-chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC------
Q 028508           99 RGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------  171 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------  171 (208)
                              .++||++||..+..+.+ +...|+++|+++.+|+++++.|+. ++||+|+.|+||+++|++.....      
T Consensus       130 --------~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~  200 (260)
T PRK06523        130 --------SGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAEA  200 (260)
T ss_pred             --------CcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHhh
Confidence                    68899999999888755 788999999999999999999998 89999999999999998653210      


Q ss_pred             ---ChHHHHHh---hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          172 ---APEEIRSK---ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       172 ---~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                         ..++....   .....|.++..+|+|++++++||+|+.+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~  242 (260)
T PRK06523        201 AGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRA  242 (260)
T ss_pred             cCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCccc
Confidence               11111111   1234688899999999999999999764

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-28  Score=189.32  Aligned_cols=197  Identities=25%  Similarity=0.359  Sum_probs=167.3

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~   78 (208)
                      +|+.+++++..+++...  +.++.++.+|++|++++.++++++.++++++|++|||+|.... .++.+.+.++|..++++
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~  117 (276)
T PRK05875         38 GRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDL  117 (276)
T ss_pred             eCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHH
Confidence            57777887777777654  2467889999999999999999999999999999999997643 45667888999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++.+.+.+.+++        .++||++||..+..+.++...|+++|++++.+++.++.++. ..||+++.|+
T Consensus       118 n~~~~~~l~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~  188 (276)
T PRK05875        118 NVNGTMYVLKHAARELVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELG-PSWVRVNSIR  188 (276)
T ss_pred             hhHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEe
Confidence            99999999999999998765        68999999999888888899999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++..................|.++++.++|++++++||+++.+
T Consensus       189 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  237 (276)
T PRK05875        189 PGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAA  237 (276)
T ss_pred             cCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999998765433322332334456677889999999999999998753

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.97  E-value=1e-28  Score=188.76  Aligned_cols=180  Identities=22%  Similarity=0.308  Sum_probs=155.9

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++..+++|+++++++.++++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.+++.+++.+.+.|++++
T Consensus        47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  126 (252)
T PRK08220         47 DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR  126 (252)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            44577899999999999999999999999999999999988777788889999999999999999999999999998765


Q ss_pred             CCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChH----
Q 028508           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----  174 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~----  174 (208)
                              .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+.++||+++|++........    
T Consensus       127 --------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~  197 (252)
T PRK08220        127 --------SGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELA-PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQ  197 (252)
T ss_pred             --------CCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhh-HhCeEEEEEecCcCcchhhhhhccchhhhh
Confidence                    68999999999888888999999999999999999999998 88999999999999998654321111    


Q ss_pred             ----HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          175 ----EIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       175 ----~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                          .....+....|.+++.+++|+|++++||+++.+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  234 (252)
T PRK08220        198 QVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLA  234 (252)
T ss_pred             hhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchh
Confidence                011233445678899999999999999998754

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-28  Score=187.83  Aligned_cols=198  Identities=28%  Similarity=0.334  Sum_probs=167.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|+++++++.++++.+.++++++|++|||+|......+.+.+.+.|+.++++|+.
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  117 (260)
T PRK06198         38 GRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVR  117 (260)
T ss_pred             cCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence            57777787777788666777888999999999999999999999999999999999887777778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+++.+.++..       .++||++||..+..+.++...|+++|+++++|+++++.|+. ..||+|+.++||+
T Consensus       118 ~~~~~~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~~i~v~~i~pg~  189 (260)
T PRK06198        118 APFFLMQEAIKLMRRRKA-------EGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALL-RNRIRVNGLNIGW  189 (260)
T ss_pred             HHHHHHHHHHHHHHhcCC-------CCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeecc
Confidence            999999999999976531       47899999999888888899999999999999999999998 8899999999999


Q ss_pred             ccCCCccCC---C--ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK---L--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +.|++....   .  ....+........+.++..+++|+++.++||+++.+
T Consensus       190 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  240 (260)
T PRK06198        190 MATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDES  240 (260)
T ss_pred             ccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhh
Confidence            999863211   0  111223333445677788999999999999998654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.4e-28  Score=186.56  Aligned_cols=197  Identities=28%  Similarity=0.377  Sum_probs=169.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+.+.. +.++.++.+|++|.++++++++++.+.++++|++|||+|.... .++.+.+.++|+..+++|
T Consensus        35 ~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n  113 (251)
T PRK07231         35 TDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVN  113 (251)
T ss_pred             EeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhh
Confidence            36888888888777765 5568899999999999999999999999999999999998654 456778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.+.+.+.++.        .++||++||..+..+.++...|+.+|++++.+++.++.++. ++||+++.++|
T Consensus       114 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~-~~~i~v~~i~p  184 (251)
T PRK07231        114 VKSPYLWTQAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELG-PDKIRVNAVAP  184 (251)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEE
Confidence            9999999999999998765        68899999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCC--hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++.|++......  .......+....|.+++..++|+|+++++|+++.+
T Consensus       185 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  234 (251)
T PRK07231        185 VVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEA  234 (251)
T ss_pred             CccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999987554322  11233445566778889999999999999998653

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-28  Score=189.38  Aligned_cols=193  Identities=24%  Similarity=0.321  Sum_probs=163.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+.+   +.++..+++|++|++++.++++.+.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        34 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (275)
T PRK08263         34 ARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFF  110 (275)
T ss_pred             ECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhH
Confidence            57777766655443   446788999999999999999999999999999999999988788888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.+++++        .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+|+.++||+
T Consensus       111 ~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~Pg~  181 (275)
T PRK08263        111 GALWVTQAVLPYLREQR--------SGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVA-EFGIKVTLVEPGG  181 (275)
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEecCC
Confidence            99999999999998765        57899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCC-------hHHHHHhhhhhhcCCCC-CCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLA-------PEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~dva~~~~~L~s~~  206 (208)
                      ++|++......       ............+..++ ++|+|+++.+++|++..
T Consensus       182 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~  234 (275)
T PRK08263        182 YSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE  234 (275)
T ss_pred             ccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC
Confidence            99987632110       11122334444566677 89999999999998864

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=3.3e-28  Score=185.15  Aligned_cols=188  Identities=26%  Similarity=0.241  Sum_probs=161.1

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      .+....+...+.++.++.+|+++.+++.++++.+.++++++|++|||+|......+.+.+.++|+.++++|+.+++.+++
T Consensus        41 ~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (245)
T PRK12824         41 KDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQ  120 (245)
T ss_pred             HHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            33333333335568899999999999999999999999999999999998877777888999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      .+++.+....        .++||++||..+..+.++...|+++|+++++|++.++.++. ++||+++.++||+++|++..
T Consensus       121 ~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~  191 (245)
T PRK12824        121 PLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGA-RYGITVNCIAPGYIATPMVE  191 (245)
T ss_pred             HHHHHHHHhC--------CeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcchh
Confidence            9999998765        68999999999999999999999999999999999999998 88999999999999988654


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ...  ......+....|.++..+++|+++.+.||+++.+
T Consensus       192 ~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  228 (245)
T PRK12824        192 QMG--PEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAA  228 (245)
T ss_pred             hcC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            322  2333445556678888999999999999998653

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-28  Score=186.34  Aligned_cols=195  Identities=28%  Similarity=0.341  Sum_probs=166.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh------CCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------g~id~lv~~ag~~~~~~~~~~~~~~~~~~   75 (208)
                      .|+++++++..+.+...+.++.++++|++|++++.++++++.+++      +++|++|||+|......+.+.+.+.|+.+
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~  117 (254)
T PRK12746         38 GRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI  117 (254)
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHH
Confidence            577888888888776656678899999999999999999998876      47999999999877777788899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.+++.+.+.+..          .++||++||..+..+.+++..|+++|++++.++++++.++. ++|++|+
T Consensus       118 ~~~n~~~~~~l~~~~~~~~~~----------~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~  186 (254)
T PRK12746        118 MAVNIKAPFFLIQQTLPLLRA----------EGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLG-ERGITVN  186 (254)
T ss_pred             HHHHhHHHHHHHHHHHHHhhc----------CCEEEEECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHh-hcCcEEE
Confidence            999999999999999998854          46899999999988899999999999999999999999998 8899999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .++||+++|++..................+.+++.+++|+++++.+++++.+
T Consensus       187 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  238 (254)
T PRK12746        187 TIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDS  238 (254)
T ss_pred             EEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence            9999999998765433333333333344566788899999999999998753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=4.4e-28  Score=184.16  Aligned_cols=193  Identities=25%  Similarity=0.296  Sum_probs=167.7

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.+++++..+++...+.++.++.+|++|++++.++++.+.+.++++|+||||+|...+..+.+.+.++|+..+++|+.++
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  113 (242)
T TIGR01829        34 NEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSV  113 (242)
T ss_pred             CHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            66667777777666566788999999999999999999999999999999999988777778889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+++.+.+.+.+.+        .++||++||..+..+.+++..|+++|+++..++++++.++. ++||+++.++||+++
T Consensus       114 ~~~~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~  184 (242)
T TIGR01829       114 FNVTQPVIDGMRERG--------WGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGA-TKGVTVNTISPGYIA  184 (242)
T ss_pred             HHHHHHHHHHHHhcC--------CcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCCCc
Confidence            999999999998765        68899999999888889999999999999999999999998 889999999999999


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++.... . ......+....|..++.+|+|+++.+.||+++++
T Consensus       185 t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  226 (242)
T TIGR01829       185 TDMVMAM-R-EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEA  226 (242)
T ss_pred             Ccccccc-c-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9865432 2 2233344556788889999999999999998764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.1e-28  Score=188.33  Aligned_cols=196  Identities=17%  Similarity=0.189  Sum_probs=163.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCC-eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.+.+++..+++...+.+ +..+.+|+++++++.++++++.+.++++|++|||+|......+.+.+.++|+..+++|
T Consensus        30 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n  109 (272)
T PRK07832         30 TDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVN  109 (272)
T ss_pred             EeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHH
Confidence            368888888888888766544 4557899999999999999999999999999999998766777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.+.|.|.+++.       +++||++||..+..+.++...|+++|+++.+|+++++.|+. ++||+|+.|+|
T Consensus       110 ~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~P  181 (272)
T PRK07832        110 LMGPIHVIETFVPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLA-RHGIGVSVVVP  181 (272)
T ss_pred             hHHHHHHHHHHHHHHHhCCC-------CcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            99999999999999976431       47999999999888889999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCC-----hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          160 GPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       160 G~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+++|++......     +......... ...++..+|+|+|+.+++++..
T Consensus       182 g~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        182 GAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             CcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHhc
Confidence            9999987543210     1111111211 1245678999999999999864

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-28  Score=189.11  Aligned_cols=181  Identities=18%  Similarity=0.173  Sum_probs=158.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.    ++.++.+|++|++++.++++.+.+.++++|++|||+|......+.+.+.+++++++++|+.
T Consensus        36 ~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  111 (273)
T PRK07825         36 DLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVY  111 (273)
T ss_pred             ECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHH
Confidence            578888877776663    4778999999999999999999999999999999999987778888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .|+||++||..+..+.+++..|+++|+++.+|+++++.|+. ++||+++.|+||+
T Consensus       112 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~-~~gi~v~~v~Pg~  182 (273)
T PRK07825        112 GVILGSKLAAPRMVPRG--------RGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR-GTGVHVSVVLPSF  182 (273)
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCc
Confidence            99999999999999876        68999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +.|++......           .......+++|+|+.+++++.+.
T Consensus       183 v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        183 VNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             Ccchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCC
Confidence            99886543210           01123678999999999988654

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.8e-28  Score=185.05  Aligned_cols=196  Identities=29%  Similarity=0.405  Sum_probs=167.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+.+++..+++. .+.++..+++|++|+++++++++.+.++++++|++|||+|...+..+.+.+.++++.++++|+.
T Consensus        36 ~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  114 (252)
T PRK06138         36 DRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVG  114 (252)
T ss_pred             cCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhh
Confidence            578888887777776 4567889999999999999999999999999999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+++.|++++        .++||++||..+..+.++...|+.+|++++.+++.++.|+. ++|++|+.++||.
T Consensus       115 ~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~  185 (252)
T PRK06138        115 GVFLWAKYAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHA-TDGIRVNAVAPGT  185 (252)
T ss_pred             hHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEECC
Confidence            99999999999998765        68899999999988888999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCC----ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +.|++.....    .+...........+..++.+++|+++.+++++++..
T Consensus       186 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        186 IDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             ccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9998754322    122222223334456678899999999999998753

>PRK09186 flagellin modification protein A; Provisional

Probab=99.96  E-value=5.6e-28  Score=185.13  Aligned_cols=191  Identities=26%  Similarity=0.302  Sum_probs=156.2

Q ss_pred             CCcHHHHHHHHHHHHhc-C-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC---CCCCCCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~   76 (208)
                      +|++++++++.+++... + ..+.++++|++|++++.++++++.+.++++|++|||||...   ...+.+.+.++|+..+
T Consensus        35 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~  114 (256)
T PRK09186         35 DIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENL  114 (256)
T ss_pred             ecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHH
Confidence            57888888888888543 2 24566799999999999999999999999999999997643   2456788899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----------CchhHHHHhHHHHHHHHHHHHHHh
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------WYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                      ++|+.+++.+++.++|.|++++        .++||++||..+..+.          .....|+++|+++++|+++++.|+
T Consensus       115 ~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  186 (256)
T PRK09186        115 SLHLGSSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYF  186 (256)
T ss_pred             HHhhhhHHHHHHHHHHHHHhcC--------CceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998765        6799999998765431          123469999999999999999999


Q ss_pred             cCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       147 ~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      . ++||+|+.++||++.++.      ...+...+....+..++.+++|+|++++|++++.+
T Consensus       187 ~-~~~i~v~~i~Pg~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  240 (256)
T PRK09186        187 K-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQS  240 (256)
T ss_pred             C-cCCeEEEEEecccccCCC------CHHHHHHHHhcCCccCCCCHHHhhhhHhheecccc
Confidence            8 889999999999987653      11222333344556778999999999999998764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.3e-28  Score=186.10  Aligned_cols=193  Identities=21%  Similarity=0.190  Sum_probs=158.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++.+.+.   .+.++..+.+|++|++++.++++.+.+.++++|++|||||.....++.+.+.++|++++++|+.
T Consensus        35 ~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~  111 (277)
T PRK06180         35 VRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVF  111 (277)
T ss_pred             eCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhH
Confidence            5666666554332   2446888999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.+++++        .++||++||..+..+.+++..|+++|+++++++++++.|+. ++|++|+.|+||+
T Consensus       112 g~~~l~~~~~~~~~~~~--------~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~  182 (277)
T PRK06180        112 GAVAMTKAVLPGMRARR--------RGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVA-PFGIHVTAVEPGS  182 (277)
T ss_pred             HHHHHHHHHHHHHhccC--------CCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEecCC
Confidence            99999999999998765        67899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCC-----hHHHHH------hhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLA-----PEEIRS------KATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|++......     ......      ......+..++.+|+|+|+++++++...
T Consensus       183 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        183 FRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             cccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99875432211     011111      1112234556789999999999998754

>PRK12742 oxidoreductase; Provisional

Probab=99.96  E-value=8.3e-28  Score=182.19  Aligned_cols=181  Identities=24%  Similarity=0.320  Sum_probs=148.1

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.++++++.+++     .+..+.+|++|.+++.+++++    ++++|++|||+|........+.+.++|++++++|+.++
T Consensus        40 ~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  110 (237)
T PRK12742         40 SKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAP  110 (237)
T ss_pred             CHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHH
Confidence            455555544433     256788999999988777653    57899999999987666677788999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      +.+++.+.+.|..          .++||++||..+. .+.++...|+++|+++++++++++.++. ++||+|+.|+||++
T Consensus       111 ~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~~gi~v~~v~Pg~~  179 (237)
T PRK12742        111 YHASVEAARQMPE----------GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFG-PRGITINVVQPGPI  179 (237)
T ss_pred             HHHHHHHHHHHhc----------CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHh-hhCeEEEEEecCcc
Confidence            9999999999854          5789999998874 5778889999999999999999999998 88999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++.....   ..........|++|+.+|+|+++.+.||+|+.+
T Consensus       180 ~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        180 DTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             cCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            998653321   122233445678899999999999999999865

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=183.67  Aligned_cols=197  Identities=28%  Similarity=0.360  Sum_probs=169.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.+++++..+++...+.++..+.||++++++++.+++.+.+.++++|++|||+|......+.+.+.++++.++++|+
T Consensus        34 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~  113 (258)
T PRK12429         34 ADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIML  113 (258)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcc
Confidence            36888888888888887777899999999999999999999999999999999999988777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+++.|.+++        .++||++||..+..+.+++..|+++|+++..+++.++.|+. +.||+|+.++||
T Consensus       114 ~~~~~l~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~-~~~i~v~~~~pg  184 (258)
T PRK12429        114 DGAFLTTKAALPIMKAQG--------GGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGA-THGVTVNAICPG  184 (258)
T ss_pred             hhhHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            999999999999998876        68899999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCC---------hH-HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLA---------PE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|+.......         .. .....+....+.+++.+++|+|+++++|+++.
T Consensus       185 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  240 (258)
T PRK12429        185 YVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA  240 (258)
T ss_pred             CCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence            999986543211         11 11122333345678899999999999999764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.96  E-value=6e-28  Score=185.51  Aligned_cols=196  Identities=22%  Similarity=0.305  Sum_probs=166.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|++++.+++.+++...+.++.++++|+++.+++.++++.+.++++++|++|||+|...+..+.+.+.++|+..+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  117 (262)
T PRK13394         38 DLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVD  117 (262)
T ss_pred             eCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhh
Confidence            68888888888888777777888999999999999999999999999999999999887777777888999999999999


Q ss_pred             HHHHHHHHHHHHH-HhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.+++.+++.+ .+.+        .++||++||..+..+.+....|+++|+++..+++.++.++. ++||+++.++||
T Consensus       118 ~~~~~~~~~l~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg  188 (262)
T PRK13394        118 GAFLTTKAALKHMYKDDR--------GGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPG  188 (262)
T ss_pred             hHHHHHHHHHHHHHhhcC--------CcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeC
Confidence            9999999999999 5544        68999999998888888889999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCCh---------HH-HHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAP---------EE-IRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|+........         .. ....+....+.+++.+++|+++++++|++..
T Consensus       189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~  244 (262)
T PRK13394        189 FVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFP  244 (262)
T ss_pred             cccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCcc
Confidence            9999864332211         11 1112223456678999999999999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6e-28  Score=185.02  Aligned_cols=192  Identities=22%  Similarity=0.326  Sum_probs=157.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+..++++..+++.     ..++++|++++++++++++++.+.++++|++|||+|...+  ..+.+.+.+.|+..+++|
T Consensus        38 ~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n  112 (255)
T PRK06057         38 DIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVN  112 (255)
T ss_pred             eCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHh
Confidence            566666666555542     2578999999999999999999988999999999997643  456677889999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.+++.++|.|++++        .++||++||..+..+. +++..|+++|+++..+++.++.++. ++||+|+.|+
T Consensus       113 ~~~~~~l~~~~~~~l~~~~--------~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~-~~gi~v~~i~  183 (255)
T PRK06057        113 LTSVYLCCKAALPHMVRQG--------KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFA-RQGIRVNALC  183 (255)
T ss_pred             cHHHHHHHHHHHHHHHHhC--------CcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHH-hhCcEEEEEe
Confidence            9999999999999998765        6889999998776665 4778899999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCC-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++...... ............|.+++.+++|+++++.||+++.+
T Consensus       184 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  233 (255)
T PRK06057        184 PGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDA  233 (255)
T ss_pred             eCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999987554321 11111222334677889999999999999998764

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.2e-28  Score=183.22  Aligned_cols=188  Identities=20%  Similarity=0.253  Sum_probs=158.4

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCCC--HHHHHHHHHHHHHHh-CCccEEEeCCCCCCC-CCCCCCCHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRK--REDAVRVVESTINHF-GKLDILVNAAAGNFL-VPAEDLSPNGFRTV   75 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~~--~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~-~~~~~~~~~~~~~~   75 (208)
                      ++|++++++++.+++...+ ..+..+.+|+++  .+++.++++++.+.+ +++|++|||||.... .++.+.+.++|+++
T Consensus        36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~  115 (239)
T PRK08703         36 VARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQ  115 (239)
T ss_pred             EeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHH
Confidence            3688888888888887653 356788999986  678999999999888 789999999997643 56778899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCC-CeEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY-AIRV  154 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~-gi~v  154 (208)
                      +++|+.+++.+++.+.+.|.+.+        .+++|+++|..+..+.++...|+++|++++.|+++++.|+. ++ +|+|
T Consensus       116 ~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~~i~v  186 (239)
T PRK08703        116 YRINTVAPMGLTRALFPLLKQSP--------DASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWE-RFGNLRA  186 (239)
T ss_pred             HHHhhhHHHHHHHHHHHHHHhCC--------CCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhc-cCCCeEE
Confidence            99999999999999999998765        68999999999998888889999999999999999999997 66 6999


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +.|+||+|+|++.........          ..+..+++|++..++||+++.+
T Consensus       187 ~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~  229 (239)
T PRK08703        187 NVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASAES  229 (239)
T ss_pred             EEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCccc
Confidence            999999999986543221110          1135699999999999999765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.96  E-value=1.7e-27  Score=181.86  Aligned_cols=191  Identities=25%  Similarity=0.238  Sum_probs=156.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|++++++++.+.+   +.++.++.+|++|.+++.++++++.+.++++|++|||+|... ..++.+.+.++|+.++++|+
T Consensus        31 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~  107 (248)
T PRK10538         31 GRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNN  107 (248)
T ss_pred             ECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhh
Confidence            57777777766554   446888999999999999999999999999999999999754 34666788999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.+.+++        .++||++||..+..+.++...|+++|+++++|++.++.++. ++||+|+.|+||
T Consensus       108 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg  178 (248)
T PRK10538        108 KGLVYMTRAVLPGMVERN--------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH-GTAVRVTDIEPG  178 (248)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCC
Confidence            999999999999998765        58899999999888888999999999999999999999998 899999999999


Q ss_pred             cccCCCccCC-C-ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSK-L-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++.++..... . .....   .........+.+|+|+|++++||++.+.
T Consensus       179 ~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        179 LVGGTEFSNVRFKGDDGK---AEKTYQNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             eecccccchhhccCcHHH---HHhhccccCCCCHHHHHHHHHHHhcCCC
Confidence            9985543221 1 11111   1111112245799999999999998653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.96  E-value=2.5e-27  Score=180.52  Aligned_cols=198  Identities=26%  Similarity=0.342  Sum_probs=165.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (208)
                      .|+.++.++..+++...+.++..+.+|++|++++.++++++.+.++++|++|||+|... ..++.+.+.++|+.++++|+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~  112 (247)
T PRK09730         33 QQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNV  112 (247)
T ss_pred             CCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhh
Confidence            47778888888888777767888999999999999999999999999999999999763 35667788999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+++.+++.+.++..++     +++||++||..+..+.++ +..|+++|++++.+++.++.++. ++||+++.++|
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~-----~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~i~p  186 (247)
T PRK09730        113 TGYFLCCREAVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVA-AQGIRVNCVRP  186 (247)
T ss_pred             HHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhccCCCCcccchHhHHHHHHHHHHHHHHHHH-HhCeEEEEEEe
Confidence            999999999999998753111     578999999988887775 46799999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|++......+ ..........|..+..+++|+++.++|++++.
T Consensus       187 g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        187 GFIYTEMHASGGEP-GRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             CCCcCcccccCCCH-HHHHHHHhcCCCCCCcCHHHHHHHHHhhcChh
Confidence            99999864432222 22333445567777889999999999999865

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-28  Score=182.55  Aligned_cols=168  Identities=21%  Similarity=0.212  Sum_probs=135.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRTV   75 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~------~~~~~~~~~~~~~~   75 (208)
                      +|+.++++++.+++     .+..+++|++|++++.++++++.+   ++|++|||+|....      ..+.+ +.++|+++
T Consensus        31 ~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~  101 (223)
T PRK05884         31 GARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNA  101 (223)
T ss_pred             eCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHH
Confidence            57777777766654     356789999999999999887753   69999999985321      12333 57899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.+++++.|.|.+          +|+||++||..    .+....|+++|+|+.+|+++++.|+. ++|||||
T Consensus       102 ~~~N~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~v~  166 (223)
T PRK05884        102 LDATVLSAVLTVQSVGDHLRS----------GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFG-TRGITIN  166 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHhhc----------CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEE
Confidence            999999999999999999964          58899999976    35568899999999999999999998 8999999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+||+++|++...          . ...|   ..+|+|+++.+.||+|+++
T Consensus       167 ~v~PG~v~t~~~~~----------~-~~~p---~~~~~~ia~~~~~l~s~~~  204 (223)
T PRK05884        167 AVACGRSVQPGYDG----------L-SRTP---PPVAAEIARLALFLTTPAA  204 (223)
T ss_pred             EEecCccCchhhhh----------c-cCCC---CCCHHHHHHHHHHHcCchh
Confidence            99999999874311          0 1122   2389999999999999865

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=5.8e-28  Score=182.87  Aligned_cols=172  Identities=24%  Similarity=0.317  Sum_probs=145.6

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ++..+.+|++++      ++++.+.++++|++|||+|.... .++.+.+.++|++++++|+.+++.+++.+.|.+++++ 
T Consensus        46 ~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  118 (235)
T PRK06550         46 NFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-  118 (235)
T ss_pred             cEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            456788999877      45555566899999999997643 5667788999999999999999999999999998765 


Q ss_pred             CCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHh
Q 028508          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~  179 (208)
                             .++||++||..+..+.+++..|+++|++++.++++++.|+. ++||+|+.|+||+++|+.......+......
T Consensus       119 -------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~  190 (235)
T PRK06550        119 -------SGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADW  190 (235)
T ss_pred             -------CcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHH
Confidence                   68899999999998888999999999999999999999998 8899999999999999875433333333344


Q ss_pred             hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          180 ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .....|++++.+++|+|++++||+|+.+
T Consensus       191 ~~~~~~~~~~~~~~~~a~~~~~l~s~~~  218 (235)
T PRK06550        191 VARETPIKRWAEPEEVAELTLFLASGKA  218 (235)
T ss_pred             HhccCCcCCCCCHHHHHHHHHHHcChhh
Confidence            4566788899999999999999998764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.7e-28  Score=184.35  Aligned_cols=183  Identities=20%  Similarity=0.168  Sum_probs=152.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC-CCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED-LSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+ ++.++.+|++|.+++.++++++.+++|++|++|||+|........+ .+.++|+.++++|
T Consensus        32 ~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n  110 (257)
T PRK07024         32 VARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTN  110 (257)
T ss_pred             EeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHh
Confidence            3678888887777765444 7889999999999999999999999999999999999865433333 6789999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.|++.+++.++|.|.+++        .++||++||..+..+.+....|+++|++++.|+++++.|+. ++||+|+.++|
T Consensus       111 ~~g~~~l~~~~l~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~P  181 (257)
T PRK07024        111 YFGMVATFQPFIAPMRAAR--------RGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELR-PAGVRVVTIAP  181 (257)
T ss_pred             cHHHHHHHHHHHHHHHhcC--------CCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEec
Confidence            9999999999999998765        68999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+++|++.....            .+.....+++++++.++.++.+
T Consensus       182 g~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        182 GYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             CCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhC
Confidence            999998543211            0111235778888887777654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.2e-27  Score=180.50  Aligned_cols=193  Identities=28%  Similarity=0.363  Sum_probs=162.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC---------CCCCHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---------EDLSPNGF   72 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~---------~~~~~~~~   72 (208)
                      +|+.+++++..+++...+.++..+++|+++.++++++++.+.+.++++|++|||+|...+...         .+.+.++|
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~  115 (253)
T PRK08217         36 DLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQF  115 (253)
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHH
Confidence            578888888888887777788899999999999999999999888899999999997553221         56678999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      +.++++|+.+++.+.+.+.+.+.++..       ++.||++||.. ..+.++...|+++|+|+++++++++.++. ++||
T Consensus       116 ~~~~~~n~~~~~~~~~~~~~~l~~~~~-------~~~iv~~ss~~-~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i  186 (253)
T PRK08217        116 QSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKELA-RYGI  186 (253)
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcccc-ccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCc
Confidence            999999999999999999999987531       57899999874 46777889999999999999999999998 8899


Q ss_pred             EEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++++++||+++|++.....  +.....+....|.++..+++|+++.+.||+++
T Consensus       187 ~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  237 (253)
T PRK08217        187 RVAAIAPGVIETEMTAAMK--PEALERLEKMIPVGRLGEPEEIAHTVRFIIEN  237 (253)
T ss_pred             EEEEEeeCCCcCccccccC--HHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC
Confidence            9999999999998764322  23344455566788889999999999999865

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.1e-27  Score=180.16  Aligned_cols=190  Identities=21%  Similarity=0.295  Sum_probs=159.9

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++++++.+++...+.++.++.+|++|.+++.++++++.+.++++|++|||||.....++.+.+.++|+.++++|+.+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  121 (258)
T PRK09134         42 RSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRA  121 (258)
T ss_pred             CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHH
Confidence            45666777888877667778899999999999999999999989999999999998777777888999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++.+.+.+.+..        .++||+++|..+..+.+.+..|+++|++++.++++++.++. ++ |+|++++||++
T Consensus       122 ~~~l~~~~~~~~~~~~--------~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~-~~-i~v~~i~PG~v  191 (258)
T PRK09134        122 PFVLAQAFARALPADA--------RGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALA-PR-IRVNAIGPGPT  191 (258)
T ss_pred             HHHHHHHHHHHHHhcC--------CceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-CC-cEEEEeecccc
Confidence            9999999999987654        68899999987777778888999999999999999999997 65 99999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .|+...   ....+ .......+.++..+++|+|++++++++..
T Consensus       192 ~t~~~~---~~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  231 (258)
T PRK09134        192 LPSGRQ---SPEDF-ARQHAATPLGRGSTPEEIAAAVRYLLDAP  231 (258)
T ss_pred             cCCccc---ChHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence            875321   11122 22334456777889999999999998753

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.96  E-value=7.6e-28  Score=173.81  Aligned_cols=190  Identities=23%  Similarity=0.205  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      ++++-.+++.+.-.....++||+++.+++.++++++.+++|++|++||+.++...    +.+.+.+.|.|...+++..++
T Consensus        43 ~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS  122 (259)
T COG0623          43 RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS  122 (259)
T ss_pred             HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhh
Confidence            4554455554432335679999999999999999999999999999999998763    677888999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ...+.+++.|.|.+          +|+||.++=..+.+..|++...+.+|+++++-+|.||.+++ ++|||||.|+-|+|
T Consensus       123 ~~~lak~a~~lM~~----------ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG-~~gIRVNaISAGPI  191 (259)
T COG0623         123 FTALAKAARPLMNN----------GGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLG-KEGIRVNAISAGPI  191 (259)
T ss_pred             HHHHHHHHHHhcCC----------CCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEeeecccch
Confidence            99999999999977          68999999999999999999999999999999999999999 99999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .|-....-..-..+........|++|..+.|||++...||||+-+
T Consensus       192 rTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLs  236 (259)
T COG0623         192 RTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLS  236 (259)
T ss_pred             HHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchh
Confidence            975433333334455667778899999999999999999999865

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.2e-27  Score=179.71  Aligned_cols=192  Identities=28%  Similarity=0.378  Sum_probs=163.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC---CCCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+.+.++++.+++...+.++..+.+|+++.++++.+++++.+.++++|+||||+|...   +.++.+.+.++|++.+++
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~  116 (250)
T PRK07774         37 DINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSV  116 (250)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhh
Confidence            57777788888887766667888999999999999999999999999999999999864   245667788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++++.+.+.+.+        .++||++||..++.   +...|+++|++++.++++++.++. ..||+++.++
T Consensus       117 n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~---~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~  184 (250)
T PRK07774        117 NLDGALVCTRAVYKHMAKRG--------GGAIVNQSSTAAWL---YSNFYGLAKVGLNGLTQQLARELG-GMNIRVNAIA  184 (250)
T ss_pred             hhHHHHHHHHHHHHHHHHhC--------CcEEEEEecccccC---CccccHHHHHHHHHHHHHHHHHhC-ccCeEEEEEe
Confidence            99999999999999998765        68899999987654   356799999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ||.++|++..... +...........+..+..+++|+++.+++++++.
T Consensus       185 pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  231 (250)
T PRK07774        185 PGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDE  231 (250)
T ss_pred             cCcccCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence            9999998755432 3334445566677777889999999999998864

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.1e-27  Score=178.51  Aligned_cols=191  Identities=28%  Similarity=0.388  Sum_probs=163.5

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.+.++++.+++...+.++.++.+|+++.++++++++++.+.++++|++|||+|...+.++.+.+.++|+..+++|+.+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  121 (249)
T PRK12827         42 RGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDG  121 (249)
T ss_pred             ccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhH
Confidence            45666777777777767788899999999999999999999988999999999998887778888999999999999999


Q ss_pred             HHHHHHHHH-HHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           83 TFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        83 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      ++.+++.+. +.+.++.        .++||++||..+..+.+++..|+.+|++++.++++++.++. ++|++++.++||+
T Consensus       122 ~~~l~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~i~pg~  192 (249)
T PRK12827        122 FFNVTQAALPPMIRARR--------GGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA-PRGITVNAVAPGA  192 (249)
T ss_pred             HHHHHHHHHHHHHhcCC--------CeEEEEECCchhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEECC
Confidence            999999999 5555444        57899999999998889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|++.......    .......+..+..+++|+++.+++|+++.
T Consensus       193 v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        193 INTPMADNAAPT----EHLLNPVPVQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             cCCCcccccchH----HHHHhhCCCcCCcCHHHHHHHHHHHcCcc
Confidence            999865433211    23334556667779999999999999764

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.96  E-value=1.4e-27  Score=188.26  Aligned_cols=180  Identities=18%  Similarity=0.163  Sum_probs=142.7

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCC--CCCCCCCHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFL--VPAEDLSPNGFRT   74 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~--~~~~~~~~~~~~~   74 (208)
                      ++||+++++++.+++...  +.++..+.+|+++  ++.+.++++.+.++  ++|++|||||...+  ..+.+.+.+++++
T Consensus        83 ~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~  160 (320)
T PLN02780         83 VARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKN  160 (320)
T ss_pred             EECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHH
Confidence            479999999999998764  2467788999985  33344444544444  46699999998753  4577889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-c-CCchhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~-~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      ++++|+.|++.+++.++|.|++++        .|+||++||..+.. + .+....|+++|+|+++|+++|+.|+. ++||
T Consensus       161 ~~~vN~~g~~~l~~~~lp~m~~~~--------~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~-~~gI  231 (320)
T PLN02780        161 LIKVNVEGTTKVTQAVLPGMLKRK--------KGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYK-KSGI  231 (320)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHh-ccCe
Confidence            999999999999999999998876        68999999998864 3 58899999999999999999999998 8999


Q ss_pred             EEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      +|++|+||+|+|++......            .. ...+|+++|+.++..+.
T Consensus       232 ~V~~v~PG~v~T~~~~~~~~------------~~-~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        232 DVQCQVPLYVATKMASIRRS------------SF-LVPSSDGYARAALRWVG  270 (320)
T ss_pred             EEEEEeeCceecCcccccCC------------CC-CCCCHHHHHHHHHHHhC
Confidence            99999999999986542100            00 02467777777766553

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-27  Score=184.16  Aligned_cols=189  Identities=20%  Similarity=0.215  Sum_probs=152.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.    ..  .+.++.+|++|.++++.+++.+.+.+ |++|++|||||......+.+.+.++++.++++|+
T Consensus        35 ~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  108 (277)
T PRK05993         35 CRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANF  108 (277)
T ss_pred             ECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHh
Confidence            56766665433    22  36788999999999999999997766 6899999999988877888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.+++.++|.|.+++        .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+|+.|+||
T Consensus       109 ~g~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~-~~gi~v~~v~Pg  179 (277)
T PRK05993        109 FGWHDLTRRVIPVMRKQG--------QGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQ-GSGIHVSLIEPG  179 (277)
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEecC
Confidence            999999999999998876        68999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCCh-------------HHHH---Hhhhh-hhcCCCCCCHHHHHHHHHHhcCC
Q 028508          161 PIKDTAGVSKLAP-------------EEIR---SKATD-YMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       161 ~v~t~~~~~~~~~-------------~~~~---~~~~~-~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +++|++.......             ....   ..... ..+.....+|+++|+.++..+..
T Consensus       180 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~  241 (277)
T PRK05993        180 PIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTA  241 (277)
T ss_pred             CccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcC
Confidence            9999865432100             0000   00111 11222346899999999988654

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.9e-27  Score=184.62  Aligned_cols=185  Identities=18%  Similarity=0.198  Sum_probs=154.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...+.++.++.+|++|.+++.++++.+.+.+|++|++|||||.....++.+.  +.++++.++++
T Consensus        70 ~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~v  149 (293)
T PRK05866         70 VARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVL  149 (293)
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHH
Confidence            3688899999988887767778899999999999999999999999999999999998766555442  45788999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      |+.|++.+++.++|.|.+++        .++||++||.++.. +.++...|+++|+|+++|+++++.|+. ++||+|+++
T Consensus       150 N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v  220 (293)
T PRK05866        150 NYYAPLRLIRGLAPGMLERG--------DGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWG-DRGVHSTTL  220 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcC--------CcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEE
Confidence            99999999999999998876        68999999986654 367788999999999999999999998 889999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +||+++|++.......        .  . ....+|+++|+.++..+..
T Consensus       221 ~pg~v~T~~~~~~~~~--------~--~-~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        221 YYPLVATPMIAPTKAY--------D--G-LPALTADEAAEWMVTAART  257 (293)
T ss_pred             EcCcccCccccccccc--------c--C-CCCCCHHHHHHHHHHHHhc
Confidence            9999999875421100        0  0 1245888888888776543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.2e-26  Score=176.71  Aligned_cols=195  Identities=30%  Similarity=0.424  Sum_probs=167.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+.+...+.++.++.+|+++++++.++++.+.+.++++|++||++|......+.+.+.+.|+..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  116 (247)
T PRK05565         37 DINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLT  116 (247)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence            68888888888888766667889999999999999999999999999999999999886666778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+.+.+.+.+.+++        .+++|++||..+..+.+....|+.+|++++.++++++.++. ++|++++.++||+
T Consensus       117 ~~~~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~gi~~~~v~pg~  187 (247)
T PRK05565        117 GVMLLTRYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELA-PSGIRVNAVAPGA  187 (247)
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECC
Confidence            99999999999998765        68899999999998889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|+...... +. .........+.++..+++++++.+++|+++.+
T Consensus       188 v~t~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (247)
T PRK05565        188 IDTEMWSSFS-EE-DKEGLAEEIPLGRLGKPEEIAKVVLFLASDDA  231 (247)
T ss_pred             ccCccccccC-hH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            9987654332 11 12222234566678899999999999998754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.96  E-value=6.5e-27  Score=184.33  Aligned_cols=199  Identities=16%  Similarity=0.096  Sum_probs=152.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++..+.+|++|.++++++++++.+.++++|++|||||+..+ ....+.+.++|+.++++|+
T Consensus        35 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~  114 (314)
T TIGR01289        35 CRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNH  114 (314)
T ss_pred             eCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhh
Confidence            688888888888886555678889999999999999999998888999999999997643 2334568899999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------------------------------CCchhH
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------------------------------TWYQIH  127 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------------------------~~~~~~  127 (208)
                      .+++.+++.++|.|++.+.      ..++||++||..+...                                 ..++..
T Consensus       115 ~~~~~l~~~~l~~m~~~~~------~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (314)
T TIGR01289       115 LGHFLLCNLLLDDLKNSPN------KDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKA  188 (314)
T ss_pred             hHHHHHHHHHHHHHHhCCC------CCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhh
Confidence            9999999999999986531      0379999999876421                                 134677


Q ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc-cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       128 y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |++||+|+..+++.+++++..++||+|++|+||+| .|++........................++++.++.+++++.+.
T Consensus       189 Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       189 YKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCc
Confidence            99999999999999999984246999999999999 57765432211100001111111234568999999999987653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-26  Score=179.20  Aligned_cols=196  Identities=19%  Similarity=0.243  Sum_probs=162.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++++..+++...+.++.++.+|+++++++.++++++.+.++++|++|||+|......+.+.+.+.++..+++|+.
T Consensus        41 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  120 (274)
T PRK07775         41 ARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLV  120 (274)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhH
Confidence            57777777777777766777888999999999999999999998999999999999877667778889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+++.+.++.        .++||++||..+..+.++...|+++|++++.+++.++.++. ++||++++++||+
T Consensus       121 ~~~~l~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~-~~gi~v~~v~pG~  191 (274)
T PRK07775        121 GANRLATAVLPGMIERR--------RGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELE-GTGVRASIVHPGP  191 (274)
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCCc
Confidence            99999999999998765        57899999999888888889999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChH--HHHHhhhh--hhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPE--EIRSKATD--YMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|+.........  ........  .....++..++|+|++++++++..
T Consensus       192 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        192 TLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             ccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            9987543221110  01111111  122356889999999999999754

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.3e-27  Score=179.15  Aligned_cols=189  Identities=26%  Similarity=0.177  Sum_probs=158.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHH-hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.+.++++.+.+.  +.++.++++|+++.+++.++++.+.+. ++++|++|||||......+.+.+.++++.++++|+
T Consensus        32 ~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  109 (260)
T PRK08267         32 DINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINV  109 (260)
T ss_pred             eCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHh
Confidence            578888877777654  457889999999999999999998776 78999999999998777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.|..++        .++||++||..+..+.++...|+.+|++++.|+++++.++. ++||++++|+||
T Consensus       110 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~-~~~i~v~~i~pg  180 (260)
T PRK08267        110 KGVLNGAHAALPYLKATP--------GARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWR-RHGIRVADVMPL  180 (260)
T ss_pred             HHHHHHHHHHHHHHHhCC--------CCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            999999999999998765        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +++|++...... .. ......  ......+++|+++.+++++..
T Consensus       181 ~~~t~~~~~~~~-~~-~~~~~~--~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        181 FVDTAMLDGTSN-EV-DAGSTK--RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             CcCCcccccccc-hh-hhhhHh--hccCCCCHHHHHHHHHHHHhC
Confidence            999886553111 11 111111  122356889999999999853

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.96  E-value=9.5e-27  Score=199.15  Aligned_cols=198  Identities=25%  Similarity=0.300  Sum_probs=165.7

Q ss_pred             CCcHHHHHHHHHHHHhc-C-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++... + .++..+++|++|.+++.++++++.+.+|++|++|||||.....++.+.+.++|+..+++|
T Consensus       445 ~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN  524 (676)
T TIGR02632       445 DLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDIL  524 (676)
T ss_pred             eCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            57788888887777643 2 357789999999999999999999999999999999998776777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+.+.+++.+++.|+.++.       +++||++||..+..+.++...|+++|+++++++++++.|+. ++||+||+|+|
T Consensus       525 ~~g~~~l~~~al~~m~~~~~-------~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~-~~gIrVn~V~P  596 (676)
T TIGR02632       525 ATGYFLVAREAFRQMREQGL-------GGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGG-TYGIRVNTVNP  596 (676)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-------CCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEC
Confidence            99999999999999987531       47899999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCC--CccCCC----------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDT--AGVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|.++  ++....          ........+....++++..+++|+|+++.||+++.+
T Consensus       597 g~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~  656 (676)
T TIGR02632       597 DAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKS  656 (676)
T ss_pred             CceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcc
Confidence            999753  211111          112222334556788899999999999999998643

>PRK06196 oxidoreductase; Provisional

Probab=99.96  E-value=6.3e-27  Score=184.60  Aligned_cols=190  Identities=18%  Similarity=0.159  Sum_probs=151.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.    ++.++.+|++|.++++++++++.+.++++|+||||||.....  .+.+.++|+..+++|+.
T Consensus        57 ~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~  130 (315)
T PRK06196         57 ARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACP--ETRVGDGWEAQFATNHL  130 (315)
T ss_pred             eCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC--CccCCccHHHHHHHhhH
Confidence            688888887777764    377899999999999999999999889999999999976532  34567889999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------------cCCchhHHHHhHHHHHHHHHHHHHHhcCC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGTD  149 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~  149 (208)
                      +++.+++.++|.+.+.+        .++||++||..+..            +.++...|+.+|+++..+++.++.++. +
T Consensus       131 g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~  201 (315)
T PRK06196        131 GHFALVNLLWPALAAGA--------GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGK-D  201 (315)
T ss_pred             HHHHHHHHHHHHHHhcC--------CCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence            99999999999998765        58899999976532            345667899999999999999999998 8


Q ss_pred             CCeEEEEeecCcccCCCccCCCChHHHHHhhh--hhhcCC-CCCCHHHHHHHHHHhcCCC
Q 028508          150 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAY-KFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       150 ~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~dva~~~~~L~s~~  206 (208)
                      +||+|++|+||+++|++.............+.  ...++. +..+|+|+|..++||++..
T Consensus       202 ~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  261 (315)
T PRK06196        202 QGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSP  261 (315)
T ss_pred             CCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCC
Confidence            89999999999999997543321111101111  112222 5679999999999999753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-26  Score=177.91  Aligned_cols=193  Identities=24%  Similarity=0.325  Sum_probs=161.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.  +.++..+.+|++|.+++..+++++.++++++|++||++|...+.++.+.+.++|...+++|+.
T Consensus        33 ~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (257)
T PRK07074         33 DIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLE  110 (257)
T ss_pred             eCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            578888877777763  346888999999999999999999999999999999999877777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.+.+++        .++||++||..+... .+...|+.+|++++.++++++.++. ++||+|+.++||+
T Consensus       111 ~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~  180 (257)
T PRK07074        111 AAYLCVEAVLEGMLKRS--------RGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYTKLLAVEYG-RFGIRANAVAPGT  180 (257)
T ss_pred             HHHHHHHHHHHHHHHcC--------CeEEEEEcchhhcCC-CCCcccHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCc
Confidence            99999999999998765        688999999866543 3567899999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCC-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|++...... ...+........|..++..++|+++++++|+++.
T Consensus       181 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  226 (257)
T PRK07074        181 VKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPA  226 (257)
T ss_pred             CCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch
Confidence            99986543221 1223333334567788999999999999999864

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=182.15  Aligned_cols=163  Identities=20%  Similarity=0.152  Sum_probs=132.4

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (208)
                      .++++|++|.++++++++++.   +++|+||||||....        +.|+.++++|+.+++.+++.++|.|.+      
T Consensus        26 ~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~------   88 (241)
T PRK12428         26 GFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--------APVELVARVNFLGLRHLTEALLPRMAP------   88 (241)
T ss_pred             HhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--------CCHHHhhhhchHHHHHHHHHHHHhccC------
Confidence            357899999999999998774   689999999997531        348899999999999999999998853      


Q ss_pred             CCCCCceEEEeccccccc---------------------------cCCchhHHHHhHHHHHHHHHHHH-HHhcCCCCeEE
Q 028508          103 SSSSGGIIINISATLHYT---------------------------ATWYQIHVSAAKAAVDSITRSLA-LEWGTDYAIRV  154 (208)
Q Consensus       103 ~~~~~~~iv~iss~~~~~---------------------------~~~~~~~y~~sKaa~~~~~~~la-~e~~~~~gi~v  154 (208)
                          .|+||++||..+..                           +.++...|+++|+|+.+|++.++ .|+. ++||+|
T Consensus        89 ----~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~-~~girv  163 (241)
T PRK12428         89 ----GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFG-ARGIRV  163 (241)
T ss_pred             ----CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhh-ccCeEE
Confidence                47899999998762                           56678899999999999999999 9998 889999


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+||++.|++..................|++|..+|+|+|++++||+++.+
T Consensus       164 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~  216 (241)
T PRK12428        164 NCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAA  216 (241)
T ss_pred             EEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhh
Confidence            99999999999754321110000111123577888999999999999998764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.4e-27  Score=180.05  Aligned_cols=182  Identities=16%  Similarity=0.127  Sum_probs=150.2

Q ss_pred             CCcHHH-HHHHHHHHHhcCC-CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTV-LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++ ++++.+++...+. +++++++|++|.+++.++++++.+ ++++|++|+|+|...+......+.+...+++++|
T Consensus        40 ~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN  118 (253)
T PRK07904         40 ALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEIN  118 (253)
T ss_pred             eCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHH
Confidence            577776 8888888877653 788999999999999999999886 4899999999998654211112345566789999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.+.|.|++++        .++||++||..+..+.++...|+++|+++.+|+++++.|+. ++||+|+.++|
T Consensus       119 ~~~~~~l~~~l~~~~~~~~--------~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~-~~~i~v~~v~P  189 (253)
T PRK07904        119 YTAAVSVGVLLGEKMRAQG--------FGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALR-EYGVRVLVVRP  189 (253)
T ss_pred             hHhHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCCEEEEEee
Confidence            9999999999999999876        68999999999888888888999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|++......             .....+++|+|+.++..+.+.
T Consensus       190 g~v~t~~~~~~~~-------------~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        190 GQVRTRMSAHAKE-------------APLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             CceecchhccCCC-------------CCCCCCHHHHHHHHHHHHHcC
Confidence            9999976542110             112468999999999988654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=1.3e-26  Score=175.89  Aligned_cols=188  Identities=23%  Similarity=0.270  Sum_probs=162.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++.+|+++++++.++++.+.++++++|++|||+|......+.+.+.++|+..+++|+
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  116 (239)
T PRK07666         37 LARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNL  116 (239)
T ss_pred             EeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHh
Confidence            36888888888888876667788999999999999999999999999999999999987666777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.+++        .+++|++||..+..+.++...|+.+|+++..++++++.|+. ++||+++.|+||
T Consensus       117 ~~~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg  187 (239)
T PRK07666        117 MGVYYATRAVLPSMIERQ--------SGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVR-KHNIRVTALTPS  187 (239)
T ss_pred             HHHHHHHHHHHHHHHhCC--------CcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecC
Confidence            999999999999998765        68899999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++.|++.......        .. ......+++|+|+.++.+++..
T Consensus       188 ~v~t~~~~~~~~~--------~~-~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        188 TVATDMAVDLGLT--------DG-NPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             cccCcchhhcccc--------cc-CCCCCCCHHHHHHHHHHHHhCC
Confidence            9998864322110        01 1134678999999999998764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=1.3e-27  Score=169.80  Aligned_cols=152  Identities=22%  Similarity=0.180  Sum_probs=139.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC--CCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~   78 (208)
                      ||||+++++++.++.    ..++...||+.|.++.+++++++++.++.++++|||||+..+-.+.  +...+..+..+.+
T Consensus        35 ~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~  110 (245)
T COG3967          35 CGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIAT  110 (245)
T ss_pred             ecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHH
Confidence            689999998877765    4588899999999999999999999999999999999999875554  4556778889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.++..+++.++|+++++.        .+.||++||..++.|....+.||++|||++.|+.+|+.++. ..+|+|..+.
T Consensus       111 Nl~API~Lt~~~lphl~~q~--------~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk-~t~veVIE~~  181 (245)
T COG3967         111 NLLAPIRLTALLLPHLLRQP--------EATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLK-DTSVEVIELA  181 (245)
T ss_pred             hhhhHHHHHHHHHHHHHhCC--------CceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhh-hcceEEEEec
Confidence            99999999999999999987        78999999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCC
Q 028508          159 PGPIKDT  165 (208)
Q Consensus       159 pG~v~t~  165 (208)
                      |..|+|+
T Consensus       182 PP~V~t~  188 (245)
T COG3967         182 PPLVDTT  188 (245)
T ss_pred             CCceecC
Confidence            9999997

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.8e-27  Score=180.95  Aligned_cols=177  Identities=26%  Similarity=0.284  Sum_probs=150.7

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++++|++|++++.++++.+.+.+|++|++|||+|......+.+.+.+++++++++|+.+++.+++.++|.|.+++  
T Consensus        46 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--  123 (270)
T PRK06179         46 GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG--  123 (270)
T ss_pred             CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--
Confidence            467899999999999999999999999999999999998777788889999999999999999999999999998876  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChH----H-
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----E-  175 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~-  175 (208)
                            .++||++||..+..+.+....|+++|++++.++++++.|+. ++||+++.|+||+++|++........    . 
T Consensus       124 ------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~  196 (270)
T PRK06179        124 ------SGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVR-QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY  196 (270)
T ss_pred             ------CceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeCCCcccccccccCCCCCcchhh
Confidence                  68999999999999999999999999999999999999998 88999999999999998755332110    0 


Q ss_pred             --HHHhhh--hhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          176 --IRSKAT--DYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       176 --~~~~~~--~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                        ......  ...+..+..+|+++|+.++++++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        197 DRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence              000011  1123456679999999999998764

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8e-27  Score=176.07  Aligned_cols=185  Identities=23%  Similarity=0.292  Sum_probs=152.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++++..+++.. +.++.++.+|++|++++..+++.    .+++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        28 ~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  102 (230)
T PRK07041         28 SRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFW  102 (230)
T ss_pred             eCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHH
Confidence            5777777777777653 55788899999999999988875    378999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++  .+.+.  +        .++||++||..+..+.++...|+++|+++++|+++++.|+. +  |||+.++||+
T Consensus       103 ~~~~l~~--~~~~~--~--------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~--irv~~i~pg~  167 (230)
T PRK07041        103 GAYRVAR--AARIA--P--------GGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA-P--VRVNTVSPGL  167 (230)
T ss_pred             HHHHHHh--hhhhc--C--------CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhh-C--ceEEEEeecc
Confidence            9999999  33332  2        58899999999999999999999999999999999999997 4  9999999999


Q ss_pred             ccCCCccCCCC--hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|++......  ............|.++..+|+|+|++++||+++.
T Consensus       168 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  214 (230)
T PRK07041        168 VDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG  214 (230)
T ss_pred             cccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence            99987543211  1122233344567778899999999999999853

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.6e-26  Score=179.35  Aligned_cols=195  Identities=21%  Similarity=0.226  Sum_probs=162.3

Q ss_pred             CCcHHHHHHHHHHHHhcC--CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.+.++++.+++...+  .++.++.+|++|++++.. ++++.+.++++|++|||+|...+..+.+.+.+++++.+++|
T Consensus        34 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n  112 (280)
T PRK06914         34 MRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETN  112 (280)
T ss_pred             eCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHh
Confidence            678888888777766543  468889999999999999 99999889999999999998877777788899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|.|++.+        .++||++||..+..+.+++..|+++|++++.|+++++.|+. ++||+++.++|
T Consensus       113 ~~~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~p  183 (280)
T PRK06914        113 VFGAISVTQAVLPYMRKQK--------SGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELK-PFGIDVALIEP  183 (280)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhh-hhCCEEEEEec
Confidence            9999999999999998765        58899999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCC------h-----HHHHHhhhh--hhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLA------P-----EEIRSKATD--YMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~------~-----~~~~~~~~~--~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|+++.....      .     .........  ..+..++.+++|+|+++++++++.
T Consensus       184 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  243 (280)
T PRK06914        184 GSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESK  243 (280)
T ss_pred             CCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCC
Confidence            9999986542210      0     011111111  124557789999999999999865

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=177.94  Aligned_cols=194  Identities=25%  Similarity=0.284  Sum_probs=162.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC-CHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-SPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~   80 (208)
                      +|+.++.+++.+++...+.++.++.+|++|.+++..+++.+.++++++|++|||+|......+.+. +.+++.+.+++|+
T Consensus        32 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~  111 (263)
T PRK06181         32 ARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNY  111 (263)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhh
Confidence            578888888888887777778899999999999999999999999999999999998777777777 8899999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.+.         .++||++||..+..+.+++..|+++|++++.++++++.++. ++|++++.++||
T Consensus       112 ~~~~~l~~~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~~~~i~pg  181 (263)
T PRK06181        112 LGAVYCTHAALPHLKAS---------RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELA-DDGVAVTVVCPG  181 (263)
T ss_pred             HHHHHHHHHHHHHHHhc---------CCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCceEEEEecC
Confidence            99999999999998754         47899999999998999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++.|++........... .........++.+++|+++.++++++..
T Consensus       182 ~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        182 FVATDIRKRALDGDGKP-LGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             ccccCcchhhccccccc-cccccccccCCCCHHHHHHHHHHHhhCC
Confidence            99988654322111000 0001111236789999999999999754

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=178.07  Aligned_cols=188  Identities=18%  Similarity=0.231  Sum_probs=159.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++ ..+.++.++.+|++|.+++..+++.+.+ ++++|++|||+|.....++.+.+.+++++++++|+
T Consensus        35 ~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  112 (263)
T PRK09072         35 VGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNL  112 (263)
T ss_pred             EECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhh
Confidence            368888888888877 4456788999999999999999998876 78999999999987767778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.+++.+.+++.++.        .++||++||..+..+.++...|+++|+++.+++++++.|+. ++||+|+.++||
T Consensus       113 ~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg  183 (263)
T PRK09072        113 TAPMQLTRALLPLLRAQP--------SAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELA-DTGVRVLYLAPR  183 (263)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            999999999999998765        58899999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|++......      .... ....+..+++|+|+.+++++...
T Consensus       184 ~~~t~~~~~~~~------~~~~-~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        184 ATRTAMNSEAVQ------ALNR-ALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             cccccchhhhcc------cccc-cccCCCCCHHHHHHHHHHHHhCC
Confidence            999875432110      0000 11225679999999999998654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1.8e-26  Score=176.82  Aligned_cols=197  Identities=21%  Similarity=0.251  Sum_probs=160.8

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      .+.+++..+.++..+.++.++.+|+++++++.++++++.+.++++|++|||+|...+  .++.+.+.+.|+..+++|+.+
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~  116 (256)
T PRK12745         37 DEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRG  116 (256)
T ss_pred             hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchH
Confidence            345566667776666678899999999999999999999999999999999997543  456778899999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++.+.+.|.++..+.  ....++||++||..+..+.++...|+++|++++.++++++.|+. ++||+|+.|+||.+
T Consensus       117 ~~~l~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~v  193 (256)
T PRK12745        117 PFFLTQAVAKRMLAQPEPE--ELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLI  193 (256)
T ss_pred             HHHHHHHHHHHHHhccCcC--CCCCcEEEEECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEecCCC
Confidence            9999999999998754110  00135799999999998888999999999999999999999998 88999999999999


Q ss_pred             cCCCccCCCChHHHHHhhh-hhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          163 KDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +|++.....  ......+. ...|..++..++|+++++.+|+++.
T Consensus       194 ~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~  236 (256)
T PRK12745        194 KTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGD  236 (256)
T ss_pred             cCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence            987654321  11111111 2457778899999999999999765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.95  E-value=1.4e-26  Score=166.97  Aligned_cols=167  Identities=22%  Similarity=0.186  Sum_probs=140.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~   78 (208)
                      .||+++..+..+.......+++.+++|+++.+++..+++++.+-.  .++|++|+|||+... ....+.+.+.|.+++++
T Consensus        36 ~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~t  115 (249)
T KOG1611|consen   36 ARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYET  115 (249)
T ss_pred             cCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhh
Confidence            477877644444444457799999999999999999999999874  489999999998875 45566778899999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEecccccccc---CCchhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           79 DSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYTA---TWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~iv~iss~~~~~~---~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      |..|+..++|+++|++++...+   ...+..+..|||+||..+..+   ..++..|.+||+|+++|+|+++.|+. +.+|
T Consensus       116 N~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~-~~~i  194 (249)
T KOG1611|consen  116 NAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLK-DDHI  194 (249)
T ss_pred             cchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhc-CCcE
Confidence            9999999999999999876532   244556779999999877653   35678899999999999999999999 8999


Q ss_pred             EEEEeecCcccCCCccC
Q 028508          153 RVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~  169 (208)
                      -|..+|||||.|.|...
T Consensus       195 lv~sihPGwV~TDMgg~  211 (249)
T KOG1611|consen  195 LVVSIHPGWVQTDMGGK  211 (249)
T ss_pred             EEEEecCCeEEcCCCCC
Confidence            99999999999998664

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.95  E-value=4.4e-26  Score=173.97  Aligned_cols=196  Identities=29%  Similarity=0.351  Sum_probs=169.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.+++++..+++...+.++.++.+|++|.+++.++++++.++++++|++||++|...+.++.+.+.++++..++.|+
T Consensus        36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  115 (251)
T PRK12826         36 VDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNL  115 (251)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            36888888888888877666788999999999999999999999999999999999988777777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+.+.+.+.+.+++        .++||++||..+. .+.++...|+++|++++.+++.++.++. +.|++++.++|
T Consensus       116 ~~~~~l~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~~i~~~~i~p  186 (251)
T PRK12826        116 TGTFLLTQAALPALIRAG--------GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA-ARNITVNSVHP  186 (251)
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEee
Confidence            999999999999998765        6889999999888 7888899999999999999999999998 78999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |.++|+....... ..+...+....|.+++.+++|+++++++|+++.
T Consensus       187 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (251)
T PRK12826        187 GGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDE  232 (251)
T ss_pred             CCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999986543322 121233445567778899999999999999764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.9e-26  Score=175.23  Aligned_cols=190  Identities=26%  Similarity=0.309  Sum_probs=157.1

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.+.+....+.+...+.++..+.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.+.++..+++|+.++
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  119 (252)
T PRK06077         40 RAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSV  119 (252)
T ss_pred             ChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHH
Confidence            44556666666766666788899999999999999999999999999999999987777777888899999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+++.+.+.+.+          .++||++||..+..+.+++..|+++|+++++++++++.|+. + +|+++.+.||+++
T Consensus       120 ~~~~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~-~i~v~~v~Pg~i~  187 (252)
T PRK06077        120 IYCSQELAKEMRE----------GGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELA-P-KIRVNAIAPGFVK  187 (252)
T ss_pred             HHHHHHHHHHhhc----------CcEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHHHHh-c-CCEEEEEeeCCcc
Confidence            9999999999865          47899999999999999999999999999999999999997 6 9999999999999


Q ss_pred             CCCccCCCCh-HHHHHhhh-hhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          164 DTAGVSKLAP-EEIRSKAT-DYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       164 t~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |++....... ........ ...+.+++.+++|+|++++++++.
T Consensus       188 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  231 (252)
T PRK06077        188 TKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI  231 (252)
T ss_pred             ChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc
Confidence            8864321110 00011111 123455789999999999999964

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=2e-26  Score=175.78  Aligned_cols=188  Identities=21%  Similarity=0.273  Sum_probs=159.1

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCC--CHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVR--KREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVI   76 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~--~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~   76 (208)
                      ++|+.++++++.+++...+ .++.++.+|++  +++++.++++.+.+.++++|+||||||.... .++.+.+.+.|++.+
T Consensus        42 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~  121 (247)
T PRK08945         42 LGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVM  121 (247)
T ss_pred             EeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHH
Confidence            3688888888888887654 35666777775  8899999999999999999999999998654 456678889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++.+.+.|.+++        .++||++||..+..+.+++..|+++|++++.+++.++.++. ..||+++.
T Consensus       122 ~~n~~g~~~~~~~~~~~l~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~~~~  192 (247)
T PRK08945        122 QVNVNATFMLTQALLPLLLKSP--------AASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQ-GTNLRVNC  192 (247)
T ss_pred             HHccHHHHHHHHHHHHHHHhCC--------CCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhc-ccCEEEEE
Confidence            9999999999999999998866        68899999999998889999999999999999999999998 88999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++||++.|++........          ...++.+|+|+++.++||+++.+
T Consensus       193 v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  233 (247)
T PRK08945        193 INPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDS  233 (247)
T ss_pred             EecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCccc
Confidence            999999987533222111          12357899999999999998765

>PRK06194 hypothetical protein; Provisional

Probab=99.95  E-value=4e-26  Score=177.76  Aligned_cols=202  Identities=16%  Similarity=0.131  Sum_probs=161.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+.+++..+++...+.++.++.+|++|.+++.++++.+.+.+|++|+||||||......+.+.+.++|+..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  116 (287)
T PRK06194         37 DVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLW  116 (287)
T ss_pred             eCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccH
Confidence            57778888888888766667888999999999999999999999999999999999988777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcC-CCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~gi~v~~v~pG  160 (208)
                      |++.++++++|.|+++..+.  ....++||++||..+..+.++...|+++|++++.|+++++.|+.. ..+||++.++||
T Consensus       117 g~~~~~~~~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg  194 (287)
T PRK06194        117 GVIHGVRAFTPLMLAAAEKD--PAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPY  194 (287)
T ss_pred             HHHHHHHHHHHHHHhcCCCC--CCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeC
Confidence            99999999999998865210  011278999999999999899999999999999999999999861 347999999999


Q ss_pred             cccCCCccCCCC-hHH------------HHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          161 PIKDTAGVSKLA-PEE------------IRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       161 ~v~t~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++.|++...... +..            ...............+++|+|+.++.++.+
T Consensus       195 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~~  252 (287)
T PRK06194        195 FVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIRA  252 (287)
T ss_pred             cccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHHc
Confidence            999886543210 000            011111111111236999999999997643

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.5e-26  Score=174.03  Aligned_cols=189  Identities=26%  Similarity=0.341  Sum_probs=155.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+.+     ...++.+|+++.+++.++++.    .+++|++|||+|........+.+.++|++.+++|+.
T Consensus        40 ~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (245)
T PRK07060         40 ARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNAR  110 (245)
T ss_pred             eCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            56766666554433     255788999999988887765    478999999999877667777889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.+.+.+++.       .++||++||..+..+.++...|+++|++++.+++.++.++. ++||+++.++||.
T Consensus       111 ~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~-~~~i~v~~v~pg~  182 (245)
T PRK07060        111 GAALVARHVARAMIAAGR-------GGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG-PHGIRVNSVNPTV  182 (245)
T ss_pred             HHHHHHHHHHHHHHHcCC-------CcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEeeCC
Confidence            999999999999876431       37899999999999989999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|+..............+....|.+++.+++|+++++++|+++.+
T Consensus       183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  228 (245)
T PRK07060        183 TLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAA  228 (245)
T ss_pred             CCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9998754333332233344455678889999999999999998764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.95  E-value=7.4e-28  Score=173.69  Aligned_cols=178  Identities=25%  Similarity=0.281  Sum_probs=141.8

Q ss_pred             HHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 028508           10 SAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (208)
Q Consensus        10 ~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (208)
                      +...+|++.  ...+.+++||+++..++++.++++..++|.+|++||+||+..        ..+|++++++|+.|...-+
T Consensus        43 ~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T  114 (261)
T KOG4169|consen   43 EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD--------DKDWERTINVNLTGVINGT  114 (261)
T ss_pred             HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc--------chhHHHhhccchhhhhhhh
Confidence            444556654  346789999999999999999999999999999999999744        5569999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEEeecCcccCCC
Q 028508           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~v~pG~v~t~~  166 (208)
                      +..+|+|.++..+.     +|.||++||..|+.|.+-.+.|+++|+++.+|+|+|+.... ...||+++++|||++.|.+
T Consensus       115 ~~alpyMdk~~gG~-----GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l  189 (261)
T KOG4169|consen  115 QLALPYMDKKQGGK-----GGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDL  189 (261)
T ss_pred             hhhhhhhhhhcCCC-----CcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHH
Confidence            99999998876333     78999999999999999999999999999999999997642 2569999999999999875


Q ss_pred             ccCC------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhc
Q 028508          167 GVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  203 (208)
Q Consensus       167 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  203 (208)
                      ....      +..++......+..|   .-+|.++++.++-++
T Consensus       190 ~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~~~a~~~v~ai  229 (261)
T KOG4169|consen  190 AENIDASGGYLEYSDSIKEALERAP---KQSPACCAINIVNAI  229 (261)
T ss_pred             HHHHHhcCCcccccHHHHHHHHHcc---cCCHHHHHHHHHHHH
Confidence            4332      111122222222222   446778887776654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.4e-26  Score=189.40  Aligned_cols=175  Identities=22%  Similarity=0.256  Sum_probs=150.4

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      ...+.+|+++.+++.++++.+.+.++++|++|||+|...+..+.+.+.++|+.++++|+.+++.+++.+.+.+..+.   
T Consensus       258 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---  334 (450)
T PRK08261        258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD---  334 (450)
T ss_pred             CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC---
Confidence            35688999999999999999999999999999999998878888899999999999999999999999999765443   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhh
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  181 (208)
                           +++||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+++.|+||+++|++......  ...+...
T Consensus       335 -----~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~-~~gi~v~~v~PG~i~t~~~~~~~~--~~~~~~~  406 (450)
T PRK08261        335 -----GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLA-ERGITINAVAPGFIETQMTAAIPF--ATREAGR  406 (450)
T ss_pred             -----CCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeCcCcchhhhccch--hHHHHHh
Confidence                 68999999999999999999999999999999999999998 889999999999999876543221  1111122


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ...++.+.+.|+|+++++.||+++.+
T Consensus       407 ~~~~l~~~~~p~dva~~~~~l~s~~~  432 (450)
T PRK08261        407 RMNSLQQGGLPVDVAETIAWLASPAS  432 (450)
T ss_pred             hcCCcCCCCCHHHHHHHHHHHhChhh
Confidence            23456778899999999999999764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.95  E-value=1.4e-25  Score=170.81  Aligned_cols=190  Identities=30%  Similarity=0.375  Sum_probs=163.5

Q ss_pred             HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus         6 ~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      ...++..+++...+.++..+.+|+++.+++.++++++.+.++++|++||++|...+....+.+.+.+++.+++|+.+++.
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~  120 (248)
T PRK05557         41 AGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN  120 (248)
T ss_pred             hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHH
Confidence            34566667776666778899999999999999999999999999999999998877777788899999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                      +.+.+.+.+.+++        .++||++||..+..+.++...|+++|++++.+++.++.++. ..|++++.++||+++|+
T Consensus       121 l~~~~~~~~~~~~--------~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~v~pg~~~~~  191 (248)
T PRK05557        121 LTKAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA-SRGITVNAVAPGFIETD  191 (248)
T ss_pred             HHHHHHHHHHhcC--------CeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCccCCc
Confidence            9999999998765        57899999998888888999999999999999999999998 88999999999999987


Q ss_pred             CccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .....  ............+.+++.+++|+++++.+|+++.
T Consensus       192 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (248)
T PRK05557        192 MTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDE  230 (248)
T ss_pred             ccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            65432  2223344455667778899999999999999763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.95  E-value=1.4e-25  Score=170.55  Aligned_cols=195  Identities=32%  Similarity=0.366  Sum_probs=168.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++.+.+..++...+.++.++.+|+++++++.++++++...++++|++||++|.....+..+.+.++++..++.|+
T Consensus        35 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  114 (246)
T PRK05653         35 YDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNL  114 (246)
T ss_pred             EeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhh
Confidence            36888888888888887777899999999999999999999998889999999999987777777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.+.+        .++||++||..+..+..+...|+.+|++++.++++++.++. +.|++++.++||
T Consensus       115 ~~~~~l~~~~~~~l~~~~--------~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~-~~~i~~~~i~pg  185 (246)
T PRK05653        115 TGTFNVVRAALPPMIKAR--------YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELA-SRGITVNAVAPG  185 (246)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHHHh-hcCeEEEEEEeC
Confidence            999999999999987765        57899999998888888899999999999999999999997 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .++++....  .............+.+++.+++|+++.+.|++++.
T Consensus       186 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  229 (246)
T PRK05653        186 FIDTDMTEG--LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA  229 (246)
T ss_pred             CcCCcchhh--hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999876532  12223333445567778899999999999999764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=2.2e-25  Score=169.67  Aligned_cols=193  Identities=29%  Similarity=0.383  Sum_probs=163.8

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      ++....+.+.+.+...+.++.++.+|+++.+++.++++++.+.++++|++||++|...+..+.+.+.+.++..+++|+.+
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  118 (249)
T PRK12825         39 SDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSG  118 (249)
T ss_pred             CCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHH
Confidence            34555666667776666778899999999999999999999888999999999998777777788899999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++.+.+.+.+.+        .+++|++||..+..+.++...|+.+|+++.++++.++.++. ++|++++.++||++
T Consensus       119 ~~~l~~~~~~~~~~~~--------~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~-~~~i~~~~i~pg~~  189 (249)
T PRK12825        119 VFHLLRAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA-EYGITVNMVAPGDI  189 (249)
T ss_pred             HHHHHHHHHHHHHhcC--------CCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCc
Confidence            9999999999998765        67899999999988888999999999999999999999997 78999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +|+........... .. ....+.+++.+++|+++.+.|++++.
T Consensus       190 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~dva~~~~~~~~~~  231 (249)
T PRK12825        190 DTDMKEATIEEARE-AK-DAETPLGRSGTPEDIARAVAFLCSDA  231 (249)
T ss_pred             cCCccccccchhHH-hh-hccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99876543322111 11 22456777899999999999999765

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-25  Score=171.93  Aligned_cols=182  Identities=20%  Similarity=0.178  Sum_probs=155.1

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++...  +.++.++++|+++++++.++++++.++++++|++|||+|+.....+.+.+.+.+++.+++|
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n  112 (248)
T PRK08251         33 ARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETN  112 (248)
T ss_pred             eCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHH
Confidence            68888888888877654  4578899999999999999999999999999999999999877777778889999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.+++.+.+.+++.+        .++||++||..+..+.+. ...|+.+|++++.+++.++.++. ..||+|+.|+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~  183 (248)
T PRK08251        113 FVAALAQCEAAMEIFREQG--------SGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELA-KTPIKVSTIE  183 (248)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEe
Confidence            9999999999999998765        678999999988888775 68899999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ||+++|++......             .....+++++++.++..+..
T Consensus       184 pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        184 PGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             cCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhc
Confidence            99999876433211             11246788888887766543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.2e-25  Score=193.18  Aligned_cols=196  Identities=27%  Similarity=0.317  Sum_probs=167.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++... .++..+.+|+++++++.++++++.+.+|++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus       453 ~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        453 DLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             eCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888888888777654 46889999999999999999999999999999999999988888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.+++++.       +|+||++||..+..+.++...|+++|+++++++++++.++. ++||+|+.|+||.
T Consensus       532 g~~~l~~~~~~~l~~~~~-------~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~Pg~  603 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGL-------GGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELG-PDGIRVNGVNPDA  603 (681)
T ss_pred             HHHHHHHHHHHHHHhcCC-------CcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCce
Confidence            999999999999987651       38999999999999999999999999999999999999998 8899999999999


Q ss_pred             c--cCCCccCCC----------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 I--KDTAGVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +  .|+++....          ...+....+....+++++..++|+|+++++|+++.
T Consensus       604 v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~  660 (681)
T PRK08324        604 VVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGL  660 (681)
T ss_pred             eecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCcc
Confidence            9  665543221          11222233455667888999999999999999743

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-25  Score=177.44  Aligned_cols=195  Identities=17%  Similarity=0.138  Sum_probs=151.3

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++.+.  +.++.++.+|++|.++++++++++.+.++++|++|||||.... +..+.+.+.|+.++++
T Consensus        44 ~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~v  122 (313)
T PRK05854         44 PVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGT  122 (313)
T ss_pred             EeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhh
Confidence            368999999999888764  3467889999999999999999999999999999999998654 3345678999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------------CCchhHHHHhHHHHHHHHHHHHHHh
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                      |+.+++.+++.++|.|.+.         .++||++||..+..+            ++++..|+.+|+|+..|++.|++++
T Consensus       123 N~~g~~~l~~~llp~l~~~---------~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~  193 (313)
T PRK05854        123 NHLGHFALTAHLLPLLRAG---------RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRS  193 (313)
T ss_pred             hhHHHHHHHHHHHHHHHhC---------CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999754         478999999876543            3567789999999999999999864


Q ss_pred             c-CCCCeEEEEeecCcccCCCccCCCC----hHHHHHhhhhhhc-CC-CCCCHHHHHHHHHHhcCC
Q 028508          147 G-TDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMA-AY-KFGEKWDIAMAALYLASD  205 (208)
Q Consensus       147 ~-~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~-~~-~~~~~~dva~~~~~L~s~  205 (208)
                      . .++||+||+++||+|.|++......    ...+......... .. ...++++.+...+|++.+
T Consensus       194 ~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~  259 (313)
T PRK05854        194 RAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATS  259 (313)
T ss_pred             hcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeC
Confidence            2 1568999999999999987543211    0111111111110 11 134788999999988754

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-25  Score=169.14  Aligned_cols=173  Identities=23%  Similarity=0.278  Sum_probs=147.1

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (208)
                      .++.+|++|.++++++++++.+.+ ++|++|||+|...+.++.+.+.++|++.+++|+.+++.+.+.+.|.|++++    
T Consensus        44 ~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----  118 (234)
T PRK07577         44 ELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE----  118 (234)
T ss_pred             eEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC----
Confidence            467899999999999999998875 689999999988777777889999999999999999999999999998765    


Q ss_pred             CCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC-hHHHHHhhh
Q 028508          103 SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKAT  181 (208)
Q Consensus       103 ~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~  181 (208)
                          .++||++||.. ..+.++...|+++|+++++++++++.|+. ++||++++|+||++.|++...... .........
T Consensus       119 ----~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~  192 (234)
T PRK07577        119 ----QGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVL  192 (234)
T ss_pred             ----CcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEecCcccCcccccccccchhHHHHHh
Confidence                68899999985 45677889999999999999999999998 889999999999999987643221 112222334


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ...+..+..+|+|+|+.+++|+++.
T Consensus       193 ~~~~~~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        193 ASIPMRRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            4567777889999999999999875

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.95  E-value=3e-25  Score=168.23  Aligned_cols=191  Identities=31%  Similarity=0.387  Sum_probs=162.8

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .+.+++..+.+...+.++.++.+|++|+++++++++.+.+.++++|++||++|......+.+.+.+.++..+++|+.+++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~  112 (239)
T TIGR01830        33 EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVF  112 (239)
T ss_pred             hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence            35566677777766777889999999999999999999999999999999999876666677788999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .+.+.+.+.+.+.+        .+++|++||..+..+.+++..|+++|++++.+++.++.++. ..|++++.++||+++|
T Consensus       113 ~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~~~~-~~g~~~~~i~pg~~~~  183 (239)
T TIGR01830       113 NLTQAVLRIMIKQR--------SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELA-SRNITVNAVAPGFIDT  183 (239)
T ss_pred             HHHHHHHHHHHhcC--------CeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCCCC
Confidence            99999999987654        57899999999988999999999999999999999999998 7899999999999988


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +.....  ............+..++.+++|+++.+++|+++.
T Consensus       184 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  223 (239)
T TIGR01830       184 DMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDE  223 (239)
T ss_pred             hhhhhc--ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcc
Confidence            754322  2233334445667778899999999999999664

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-25  Score=165.74  Aligned_cols=155  Identities=17%  Similarity=0.264  Sum_probs=133.6

Q ss_pred             EEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 028508           24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (208)
Q Consensus        24 ~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (208)
                      .++||+++++++++++++    ++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.|+|.+       
T Consensus        35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------  103 (199)
T PRK07578         35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------  103 (199)
T ss_pred             ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence            468999999999998865    478999999999877777888899999999999999999999999999964       


Q ss_pred             CCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhh
Q 028508          104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY  183 (208)
Q Consensus       104 ~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~  183 (208)
                         .++|+++||..+..+.+++..|+++|+++++|+++++.|+  ++||+|+.|+||+++|++...           ...
T Consensus       104 ---~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~gi~v~~i~Pg~v~t~~~~~-----------~~~  167 (199)
T PRK07578        104 ---GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL--PRGIRINVVSPTVLTESLEKY-----------GPF  167 (199)
T ss_pred             ---CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc--cCCeEEEEEcCCcccCchhhh-----------hhc
Confidence               5789999999999899999999999999999999999998  569999999999999864211           111


Q ss_pred             hcCCCCCCHHHHHHHHHHhcCC
Q 028508          184 MAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       184 ~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      .+..+..+++|+|+.++++++.
T Consensus       168 ~~~~~~~~~~~~a~~~~~~~~~  189 (199)
T PRK07578        168 FPGFEPVPAARVALAYVRSVEG  189 (199)
T ss_pred             CCCCCCCCHHHHHHHHHHHhcc
Confidence            2334567999999999998864

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.95  E-value=5.7e-26  Score=171.99  Aligned_cols=165  Identities=18%  Similarity=0.158  Sum_probs=136.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (208)
                      .++.++++|+++.++++++.    ++++++|++|||+|....      .++.+.+.+.|+..+++|+.+++.+++.+.|.
T Consensus        43 ~~~~~~~~Dls~~~~~~~~~----~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~  118 (235)
T PRK09009         43 DNVQWHALDVTDEAEIKQLS----EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK  118 (235)
T ss_pred             CceEEEEecCCCHHHHHHHH----HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence            45778999999999988753    456899999999998752      34667788999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEeccccccc---cCCchhHHHHhHHHHHHHHHHHHHHhcCC--CCeEEEEeecCcccCCCcc
Q 028508           94 LKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        94 ~~~~~~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~sKaa~~~~~~~la~e~~~~--~gi~v~~v~pG~v~t~~~~  168 (208)
                      |.+.+        .++|+++||..+..   +.+++..|+++|+++++|+++|+.|+. +  +||+|+.|+||+++|++..
T Consensus       119 ~~~~~--------~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~~~~i~v~~v~PG~v~t~~~~  189 (235)
T PRK09009        119 LKQSE--------SAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQ-RSLKHGVVLALHPGTTDTALSK  189 (235)
T ss_pred             ccccC--------CceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhh-cccCCeEEEEEcccceecCCCc
Confidence            97654        57899998865533   346778999999999999999999997 5  6999999999999998753


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .          .....|.+++.+|+|+|+.+++|+++.+
T Consensus       190 ~----------~~~~~~~~~~~~~~~~a~~~~~l~~~~~  218 (235)
T PRK09009        190 P----------FQQNVPKGKLFTPEYVAQCLLGIIANAT  218 (235)
T ss_pred             c----------hhhccccCCCCCHHHHHHHHHHHHHcCC
Confidence            2          1123456678899999999999998764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.94  E-value=5.9e-25  Score=168.18  Aligned_cols=197  Identities=30%  Similarity=0.372  Sum_probs=163.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.+..+++.+++...+.++..+.+|++|.+++.++++.+.+.++++|++||++|........+.++++++.++++|+
T Consensus        31 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~  110 (255)
T TIGR01963        31 NDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIML  110 (255)
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            36788888888888876666788999999999999999999999889999999999987766667778899999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.+.+        .+++|++||..+..+.+.+..|+.+|++++.+++.++.++. +.|++++.++||
T Consensus       111 ~g~~~~~~~~~~~~~~~~--------~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~-~~~i~v~~i~pg  181 (255)
T TIGR01963       111 TSAFHTIRAALPHMKKQG--------WGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVA-AHGITVNAICPG  181 (255)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecC
Confidence            999999999999997765        57899999998888889999999999999999999999997 789999999999


Q ss_pred             cccCCCccCCCC---------hH-HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLA---------PE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++++++......         .. ..........+.+.+.+++|+|+++++++++.
T Consensus       182 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  237 (255)
T TIGR01963       182 YVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDA  237 (255)
T ss_pred             ccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcc
Confidence            999875322110         00 11111222334556889999999999999763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.8e-25  Score=169.04  Aligned_cols=182  Identities=14%  Similarity=0.082  Sum_probs=155.6

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++.+++.+++... +.++.++++|+++++++.++++++.+   ++|++|||+|......+.+.+.+++.+.+++|
T Consensus        31 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n  107 (243)
T PRK07102         31 AARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGDQAACEADPALALREFRTN  107 (243)
T ss_pred             EeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHhh
Confidence            368888888888777654 45788999999999999999988765   57999999998777777788899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.+.|.|.+++        .++||++||..+..+.++...|+++|+++++++++++.|+. ++||+|+.|+|
T Consensus       108 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~-~~gi~v~~v~p  178 (243)
T PRK07102        108 FEGPIALLTLLANRFEARG--------SGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLF-KSGVHVLTVKP  178 (243)
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhh-ccCcEEEEEec
Confidence            9999999999999998765        68999999999988888899999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|++.....            .+.....+++++++.++.+++..
T Consensus       179 g~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        179 GFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             CcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCC
Confidence            999987533211            12234678999999999988754

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.7e-25  Score=170.70  Aligned_cols=188  Identities=19%  Similarity=0.227  Sum_probs=149.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++.+.    ..  .+..+.+|+++.+++.++++.+.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        32 ~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~  105 (274)
T PRK05693         32 ARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVF  105 (274)
T ss_pred             eCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            46655554332    22  3667899999999999999999999999999999999877777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.+.+.         .++||++||..+..+.+....|+++|++++.|+++++.|+. ++||+|+.++||+
T Consensus       106 g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~pg~  175 (274)
T PRK05693        106 AVVGVTRALFPLLRRS---------RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELA-PFGVQVMEVQPGA  175 (274)
T ss_pred             HHHHHHHHHHHHHhhc---------CCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCc
Confidence            9999999999998753         47899999999998999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCCh---------HH--HHHhhhh--hhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLAP---------EE--IRSKATD--YMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~~---------~~--~~~~~~~--~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|++.......         ..  .......  ........+++++|+.++..+..
T Consensus       176 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        176 IASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             cccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            999875432110         00  0011100  11112356899999999887653

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=7.2e-25  Score=169.81  Aligned_cols=192  Identities=22%  Similarity=0.247  Sum_probs=154.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+++.++++.+.+   +.++.++.+|++|.+++.++++++.+.++++|+||||+|.....+..+.+.++++..+++|+.
T Consensus        33 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  109 (276)
T PRK06482         33 VRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLI  109 (276)
T ss_pred             eCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhH
Confidence            46666666554443   346888999999999999999999998899999999999887777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|+|++++        .++||++||..+..+.++...|+++|++++.|+++++.++. ++||+++.++||.
T Consensus       110 g~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~v~pg~  180 (276)
T PRK06482        110 GSIQVIRAALPHLRRQG--------GGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVA-PFGIEFTIVEPGP  180 (276)
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCc
Confidence            99999999999998765        57899999999888889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCC-------hHHHHHhh---hhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLA-------PEEIRSKA---TDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +.|++......       .......+   ....+..-.++++|++++++..+..
T Consensus       181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~  234 (276)
T PRK06482        181 ARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQ  234 (276)
T ss_pred             cccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcC
Confidence            98875332110       01111111   1111222247899999999988754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=7.4e-27  Score=166.96  Aligned_cols=138  Identities=26%  Similarity=0.334  Sum_probs=129.4

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHH-HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTIN-HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~-~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ......|+++++++..+..++++ .+|++|+++||||.....+..|.+.+..++++++|++|.+.++|++...+.+.   
T Consensus        54 l~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika---  130 (289)
T KOG1209|consen   54 LKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA---  130 (289)
T ss_pred             CeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc---
Confidence            77899999999999999999998 78999999999999988888999999999999999999999999999665554   


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            +|.||+++|..+..++|+.+.|+++|||++++++.|+.|+. |.||+|..+.||.|.|.....
T Consensus       131 ------KGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~-PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  131 ------KGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELK-PFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ------cceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeee-ccccEEEEecccceecccccC
Confidence                  69999999999999999999999999999999999999999 999999999999999986554

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-25  Score=171.87  Aligned_cols=180  Identities=16%  Similarity=0.124  Sum_probs=148.0

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCC--cc--EEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGK--LD--ILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id--~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (208)
                      +.+++++++|+++.+++.++++++.+.++.  ++  ++|+|+|...+ .++.+.+.++|.+.+++|+.+++.+++.++|.
T Consensus        47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  126 (251)
T PRK06924         47 NSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKH  126 (251)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHH
Confidence            457888999999999999999999877653  22  89999998654 56778899999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEEeecCcccCCCccCCC-
Q 028508           94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKL-  171 (208)
Q Consensus        94 ~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~-  171 (208)
                      +.+.+.       .++||++||..+..+.+++..|+++|+|+++|++.++.|+. .++||+|+.|+||++.|++..... 
T Consensus       127 ~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~  199 (251)
T PRK06924        127 TKDWKV-------DKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRS  199 (251)
T ss_pred             HhccCC-------CceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHh
Confidence            987431       47899999999999999999999999999999999999974 146899999999999998643210 


Q ss_pred             -ChH--HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          172 -APE--EIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       172 -~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                       ...  .....+....+.+++.+++|+|+.+++|+++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        200 SSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             cCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhc
Confidence             011  1122334455778899999999999999987

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.3e-25  Score=192.90  Aligned_cols=183  Identities=17%  Similarity=0.123  Sum_probs=155.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...+.++.++.+|++|.+++.++++++.+.+|++|++|||||......+.+.  ..++++.++++
T Consensus       401 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  480 (657)
T PRK07201        401 VARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAV  480 (657)
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHH
Confidence            3688899999999888777789999999999999999999999999999999999998654443332  25789999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++.++|.|++++        .++||++||..+..+.++.+.|+++|+++++|+++++.|+. ++||+|+.|+
T Consensus       481 N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~  551 (657)
T PRK07201        481 NYFGAVRLILGLLPHMRERR--------FGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETL-SDGITFTTIH  551 (657)
T ss_pred             HHHHHHHHHHHHHHhhhhcC--------CCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEE
Confidence            99999999999999998776        68999999999998999999999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhc
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  203 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  203 (208)
                      ||+|+|++......           .......+|+++|+.++..+
T Consensus       552 pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~~  585 (657)
T PRK07201        552 MPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRAI  585 (657)
T ss_pred             CCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHHH
Confidence            99999987543210           01123467888888888755

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-24  Score=167.51  Aligned_cols=194  Identities=27%  Similarity=0.373  Sum_probs=159.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.+.++++.+++...  ++..+.+|++|++++..+++++.+.++++|+|||++|.. ........+.++|..++++|+
T Consensus        42 ~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~  119 (264)
T PRK12829         42 DVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNL  119 (264)
T ss_pred             eCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            57777777666655432  578899999999999999999999999999999999987 445667788999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+++.+.+.+...+        . +.|+++||..+..+.+++..|+.+|++++.+++.++.++. ..+++++.++|
T Consensus       120 ~~~~~~~~~~~~~~~~~~--------~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~-~~~i~~~~l~p  190 (264)
T PRK12829        120 NGQFYFARAAVPLLKASG--------HGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG-PLGIRVNAILP  190 (264)
T ss_pred             HHHHHHHHHHHHHHHhCC--------CCeEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEec
Confidence            999999999999887654        3 6799999998888888899999999999999999999997 78999999999


Q ss_pred             CcccCCCccCCCC---------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|++......         ............+..++.+++|+++++++++++.
T Consensus       191 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  246 (264)
T PRK12829        191 GIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPA  246 (264)
T ss_pred             CCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            9999886432211         1122223344456677899999999999998753

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.94  E-value=8.7e-26  Score=170.79  Aligned_cols=140  Identities=26%  Similarity=0.288  Sum_probs=128.4

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK   95 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~   95 (208)
                      ..+..+++.|++++++++++.+.+++..+  ++=+||||||+... ++..=.+.+++++++++|+.|++.+++.++|.++
T Consensus        75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr  154 (322)
T KOG1610|consen   75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR  154 (322)
T ss_pred             CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence            45788899999999999999999998764  58899999997754 5555578999999999999999999999999998


Q ss_pred             hcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           96 KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        96 ~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      ++         +||||++||+.|..+.|..+.|++||+|++.|+.+|++|+. +.||+|..|.||...|+...
T Consensus       155 ~a---------rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~-~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  155 RA---------RGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELR-PFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hc---------cCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHH-hcCcEEEEeccCccccccCC
Confidence            87         69999999999999999999999999999999999999999 99999999999999988765

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.2e-24  Score=164.79  Aligned_cols=185  Identities=29%  Similarity=0.375  Sum_probs=157.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++... .+++++++|+++.+++..+++++.+.++++|++||++|.....++.+.+.+++++++++|+
T Consensus        36 ~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  114 (237)
T PRK07326         36 TARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNL  114 (237)
T ss_pred             eeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhcc
Confidence            368888888888888654 5688999999999999999999999999999999999987777777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++++++.+. +.        .++||++||..+..+.++...|+.+|+++.++++.++.|+. ..|++++.|+||
T Consensus       115 ~~~~~~~~~~~~~~~-~~--------~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~-~~gi~v~~v~pg  184 (237)
T PRK07326        115 TGAFYTIKAAVPALK-RG--------GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLR-QYGIKVSTIMPG  184 (237)
T ss_pred             HHHHHHHHHHHHHHH-HC--------CeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeec
Confidence            999999999999883 33        57899999999888888889999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++.|+.........           .....+++|+++.++++++.+.
T Consensus       185 ~~~t~~~~~~~~~~-----------~~~~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        185 SVATHFNGHTPSEK-----------DAWKIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             cccCcccccccchh-----------hhccCCHHHHHHHHHHHHhCCc
Confidence            99987543321110           0013689999999999987653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.94  E-value=1.3e-24  Score=171.98  Aligned_cols=199  Identities=15%  Similarity=0.051  Sum_probs=147.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++.+|++|.++++++++++.+.++++|+||||||+... ....+.+.++|+.++++|+
T Consensus        37 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~  116 (322)
T PRK07453         37 CRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNH  116 (322)
T ss_pred             ECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHH
Confidence            688888888888886545578889999999999999999988777889999999998654 2334678899999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------------------------------cCCch
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------------------------------ATWYQ  125 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------------------------------~~~~~  125 (208)
                      .|++.+++.++|.|++.+.+      .++||++||..+..                                   +..+.
T Consensus       117 ~g~~~l~~~~~~~~~~~~~~------~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (322)
T PRK07453        117 LGHFLLCNLLLEDLKKSPAP------DPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPG  190 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCCC------CceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCcc
Confidence            99999999999999876410      25899999975421                                   11235


Q ss_pred             hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc-CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       126 ~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      ..|+.||.+...+++.+++++...+||+|++++||.|. |++........................++++.++.+++++.
T Consensus       191 ~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (322)
T PRK07453        191 KAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVA  270 (322)
T ss_pred             chhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhc
Confidence            67999999999999999999842569999999999994 66543322111111111111112234577788888888765


Q ss_pred             CC
Q 028508          205 DA  206 (208)
Q Consensus       205 ~~  206 (208)
                      +.
T Consensus       271 ~~  272 (322)
T PRK07453        271 DP  272 (322)
T ss_pred             Cc
Confidence            43

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.5e-25  Score=169.31  Aligned_cols=178  Identities=20%  Similarity=0.204  Sum_probs=146.3

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHH-HHHHh---CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVRKREDAVRVVES-TINHF---GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (208)
                      +.++.++.+|+++.+++.+++++ +.+.+   +++|++|||+|.... .++.+.+.++|+..+++|+.+++.+++.+.+.
T Consensus        44 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  123 (243)
T PRK07023         44 GERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQA  123 (243)
T ss_pred             CCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHH
Confidence            45688899999999999998877 55544   479999999998654 56667889999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC--
Q 028508           94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--  171 (208)
Q Consensus        94 ~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--  171 (208)
                      +.+++        .++||++||..+..+.+++..|+++|++++++++.++.+ . +.||+++.|+||+++|++.....  
T Consensus       124 ~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~-~~~i~v~~v~pg~~~t~~~~~~~~~  193 (243)
T PRK07023        124 ASDAA--------ERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-A-NRALRIVSLAPGVVDTGMQATIRAT  193 (243)
T ss_pred             hhccC--------CCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc-C-CCCcEEEEecCCccccHHHHHHHhc
Confidence            98755        689999999999999999999999999999999999999 6 88999999999999998643210  


Q ss_pred             Ch--HHHHHhhhhhhcCCCCCCHHHHHH-HHHHhcCCC
Q 028508          172 AP--EEIRSKATDYMAAYKFGEKWDIAM-AALYLASDA  206 (208)
Q Consensus       172 ~~--~~~~~~~~~~~~~~~~~~~~dva~-~~~~L~s~~  206 (208)
                      ..  ......+....+.++..+|+|+|+ .+.+|++++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        194 DEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             ccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            00  011223444566788999999999 567777764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=4.3e-25  Score=166.72  Aligned_cols=190  Identities=21%  Similarity=0.154  Sum_probs=160.8

Q ss_pred             CCCcHHHHHHHHHHHHhcC--CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++.-..  ..+.+..+|+.|.+++..+++++....+.+|.+|+|||..-++-+.+.++++++..+++
T Consensus        63 ~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~v  142 (331)
T KOG1210|consen   63 TARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDV  142 (331)
T ss_pred             EeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHh
Confidence            4689999999999997652  23568999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |..|+++.+++.++.|++...       .|+|+.+||..+..+..+++.|+++|+|+.+|+..+++|+. ++||+|....
T Consensus       143 Nylgt~~v~~~~~~~mk~~~~-------~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l~qE~i-~~~v~Vt~~~  214 (331)
T KOG1210|consen  143 NYLGTVNVAKAAARAMKKREH-------LGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEALRQELI-KYGVHVTLYY  214 (331)
T ss_pred             hhhhhHHHHHHHHHHhhcccc-------CcEEEEehhhhhhcCcccccccccHHHHHHHHHHHHHHHHh-hcceEEEEEc
Confidence            999999999999999988652       46999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHH
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL  200 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  200 (208)
                      |+.+.||.+..+...........+.  ......+|++|.+++
T Consensus       215 P~~~~tpGfE~En~tkP~~t~ii~g--~ss~~~~e~~a~~~~  254 (331)
T KOG1210|consen  215 PPDTLTPGFERENKTKPEETKIIEG--GSSVIKCEEMAKAIV  254 (331)
T ss_pred             CCCCCCCccccccccCchheeeecC--CCCCcCHHHHHHHHH
Confidence            9999999776553221111111111  112357788877765

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=6.6e-24  Score=161.77  Aligned_cols=190  Identities=28%  Similarity=0.348  Sum_probs=157.3

Q ss_pred             cHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      +.+.++.+.+.+... +..+.++.+|+++.+++..+++.+.+.++++|++|||+|...+.++.+.+.++++.++++|+.+
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g  119 (249)
T PRK09135         40 SAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKA  119 (249)
T ss_pred             CHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchh
Confidence            345566666666544 3457889999999999999999999999999999999998777677777889999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+.+++.+.+.+.         .+.++++++..+..+.++...|+.+|++++.+++.++.++. + +++++.++||++
T Consensus       120 ~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~-~i~~~~v~pg~~  188 (249)
T PRK09135        120 PFFLSQAAAPQLRKQ---------RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELA-P-EVRVNAVAPGAI  188 (249)
T ss_pred             HHHHHHHHHHHHhhC---------CeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHHHHHC-C-CCeEEEEEeccc
Confidence            999999999988654         47889888888888888899999999999999999999986 5 799999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+....... ...........+..+..+++|+++++++++.+
T Consensus       189 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~  230 (249)
T PRK09135        189 LWPEDGNSFD-EEARQAILARTPLKRIGTPEDIAEAVRFLLAD  230 (249)
T ss_pred             cCccccccCC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc
Confidence            9987543322 22333344455667778999999999999875

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.5e-24  Score=163.06  Aligned_cols=184  Identities=26%  Similarity=0.261  Sum_probs=156.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++.++..+++...  .+..+.+|++|.+++..+++++.+.++++|++||++|......+.+.+.+++++.+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  115 (239)
T PRK12828         38 GRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVK  115 (239)
T ss_pred             eCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhch
Confidence            57777777766666543  3566789999999999999999999999999999999876666777889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.+...+        .++||++||..+..+.++...|+++|++++.+++.++.++. ++|++++.++||+
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~i~pg~  186 (239)
T PRK12828        116 TTLNASKAALPALTASG--------GGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL-DRGITVNAVLPSI  186 (239)
T ss_pred             hHHHHHHHHHHHHHhcC--------CCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence            99999999999998765        68899999999988888899999999999999999999997 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++++.........          +...+.+++|+++++++++++.
T Consensus       187 v~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~~l~~~  221 (239)
T PRK12828        187 IDTPPNRADMPDA----------DFSRWVTPEQIAAVIAFLLSDE  221 (239)
T ss_pred             ccCcchhhcCCch----------hhhcCCCHHHHHHHHHHHhCcc
Confidence            9987433222111          1234678999999999999865

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.3e-24  Score=169.43  Aligned_cols=190  Identities=17%  Similarity=0.123  Sum_probs=146.5

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++.++..+++...  +.++.++.+|++|.+++.++++++.+.++++|++|||||...+.  .+.+.++++..+++|
T Consensus        47 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN  124 (306)
T PRK06197         47 VRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTN  124 (306)
T ss_pred             eCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC--CccCCCCcchhhhhh
Confidence            68888888877777653  34678899999999999999999999999999999999976542  346678899999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------------cCCchhHHHHhHHHHHHHHHHHHHHh
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------------ATWYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------------~~~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                      +.+++.+++.++|.+++.+        .++||++||..+..             +.++...|+++|+++..|++.+++++
T Consensus       125 ~~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l  196 (306)
T PRK06197        125 HLGHFALTGLLLDRLLPVP--------GSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRL  196 (306)
T ss_pred             hHHHHHHHHHHHHHHhhCC--------CCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998765        57999999987543             23467789999999999999999999


Q ss_pred             cCCCCeEEEEe--ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          147 GTDYAIRVNGI--APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       147 ~~~~gi~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      . ++|++|+++  +||+|.|++......  .....+....+. ...++++.+...++++.+
T Consensus       197 ~-~~~i~v~~v~~~PG~v~T~~~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~  253 (306)
T PRK06197        197 A-AAGATTIAVAAHPGVSNTELARNLPR--ALRPVATVLAPL-LAQSPEMGALPTLRAATD  253 (306)
T ss_pred             h-cCCCCeEEEEeCCCcccCcccccCcH--HHHHHHHHHHhh-hcCCHHHHHHHHHHHhcC
Confidence            8 778777665  799999987654321  111111111121 124667777777776544

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.93  E-value=3.8e-24  Score=163.48  Aligned_cols=172  Identities=31%  Similarity=0.425  Sum_probs=144.5

Q ss_pred             CeeEEEcCCCC-HHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           21 PAIGLEGDVRK-REDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        21 ~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      .+....+|+++ .++++.+++.+.+.+|++|++|||||.... .++.+.+.++|+.++++|+.+++.+++.+.|.+.+  
T Consensus        58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--  135 (251)
T COG1028          58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK--  135 (251)
T ss_pred             cEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh--
Confidence            57788899998 999999999999999999999999999877 48888999999999999999999999988887773  


Q ss_pred             CCCCCCCCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHH-H
Q 028508           99 RGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-I  176 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~-~  176 (208)
                              . +||++||..+. +.++ +..|+++|+|+.+|+++++.|+. ++||+|+.|+||++.|++......... .
T Consensus       136 --------~-~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~PG~~~t~~~~~~~~~~~~~  204 (251)
T COG1028         136 --------Q-RIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYIDTPMTAALESAELEA  204 (251)
T ss_pred             --------C-eEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeccCCCcchhhhhhhhhhH
Confidence                    3 79999999999 8777 49999999999999999999998 889999999999999887664332210 0


Q ss_pred             HHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          177 RSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ........+..+...|++++..+.|+.+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (251)
T COG1028         205 LKRLAARIPLGRLGTPEEVAAAVAFLASD  233 (251)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            11111111555788999999999998765

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=1.7e-24  Score=168.50  Aligned_cols=190  Identities=17%  Similarity=0.128  Sum_probs=152.3

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      .||.++.+++.+++...  ..++.++++|++|.++++++.+++.+.++++|++|||||++.+..  ..+.|.+|.++.+|
T Consensus        66 ~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN  143 (314)
T KOG1208|consen   66 CRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATN  143 (314)
T ss_pred             eCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc--ccCccchhheehhh
Confidence            68999999999999874  346788999999999999999999999999999999999998654  56778999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------c--CCchhHHHHhHHHHHHHHHHHHHHh
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------A--TWYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~--~~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                      ..|++.+++.++|.++...        .+|||++||..+..           .  +.....|+.||.++..+++.|++++
T Consensus       144 ~lg~flLt~lLlp~lk~s~--------~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l  215 (314)
T KOG1208|consen  144 YLGHFLLTELLLPLLKRSA--------PSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRL  215 (314)
T ss_pred             hHHHHHHHHHHHHHHhhCC--------CCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHh
Confidence            9999999999999999865        48999999987611           0  3344459999999999999999999


Q ss_pred             cCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       147 ~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      . + ||.++.++||.+.|+.....   ..+...+........+-++++.|+..+|+.-++
T Consensus       216 ~-~-~V~~~~~hPG~v~t~~l~r~---~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p  270 (314)
T KOG1208|consen  216 K-K-GVTTYSVHPGVVKTTGLSRV---NLLLRLLAKKLSWPLTKSPEQGAATTCYAALSP  270 (314)
T ss_pred             h-c-CceEEEECCCcccccceecc---hHHHHHHHHHHHHHhccCHHHHhhheehhccCc
Confidence            7 6 99999999999999844431   111222222222222347888888888875543

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.7e-25  Score=167.03  Aligned_cols=185  Identities=19%  Similarity=0.186  Sum_probs=145.0

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+. +.++.+.+++...+.++..+.+|++|++++..+++++.+.++++|++|||+|......   .   .++..+++|+
T Consensus        37 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~---~---~~~~~~~vn~  110 (248)
T PRK07806         37 YRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESG---M---DEDYAMRLNR  110 (248)
T ss_pred             eCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCC---C---CcceeeEeee
Confidence            4554 4566777777666667888999999999999999999998899999999998643221   1   2456788999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      .+++.+++.+.+.|..          .++||++||..+.     .+.+.+..|+++|++++.+++.++.|+. ++||+|+
T Consensus       111 ~~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~-~~~i~v~  179 (248)
T PRK07806        111 DAQRNLARAALPLMPA----------GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELA-EKGIGFV  179 (248)
T ss_pred             HHHHHHHHHHHhhccC----------CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhh-ccCeEEE
Confidence            9999999999998853          4689999996543     2345577899999999999999999998 8899999


Q ss_pred             EeecCcccCCCccCC---CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          156 GIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .|+||++.|+.....   ..+...   .....|.+++++++|+++++++|+++.
T Consensus       180 ~v~pg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~l~~~~  230 (248)
T PRK07806        180 VVSGDMIEGTVTATLLNRLNPGAI---EARREAAGKLYTVSEFAAEVARAVTAP  230 (248)
T ss_pred             EeCCccccCchhhhhhccCCHHHH---HHHHhhhcccCCHHHHHHHHHHHhhcc
Confidence            999999988754321   111111   123457788999999999999999854

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.93  E-value=1.7e-24  Score=155.59  Aligned_cols=133  Identities=30%  Similarity=0.375  Sum_probs=125.4

Q ss_pred             CCc--HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+  .++++++.+++...+.++.++++|++++++++++++++.+.++++|++|||+|...+.++.+.+.++|++++++|
T Consensus        32 ~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n  111 (167)
T PF00106_consen   32 SRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVN  111 (167)
T ss_dssp             ESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHH
T ss_pred             eecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence            566  788899999999888889999999999999999999999999999999999999998888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHh
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                      +.+++.+.+.+.|    ++        .++||++||..+..+.+++..|+++|+|+++|++++++|+
T Consensus       112 ~~~~~~~~~~~~~----~~--------~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  112 LFGPFLLAKALLP----QG--------GGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             THHHHHHHHHHHH----HT--------TEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeeeeehhee----cc--------ccceEEecchhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999    33        6999999999999999999999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=9.5e-26  Score=156.41  Aligned_cols=187  Identities=23%  Similarity=0.307  Sum_probs=154.9

Q ss_pred             HHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHHHHHHHHH
Q 028508            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         8 ~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~   81 (208)
                      -+++.+++   |.++++..+|++++++++.++...+.+||++|.+|||||+...      ..-...+.|++++.+++|+.
T Consensus        46 g~~vakel---g~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~  122 (260)
T KOG1199|consen   46 GADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVL  122 (260)
T ss_pred             chHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeee
Confidence            34455555   7789999999999999999999999999999999999997643      12234678999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |+|+..+.....|-+..+.  ...++|.||+..|.+++.+..++..|+++|.++.+|+--+++++. ..|||++.|.||.
T Consensus       123 gtfnvirl~aglmg~nepd--q~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpiardla-~~gir~~tiapgl  199 (260)
T KOG1199|consen  123 GTFNVIRLGAGLMGENEPD--QNGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPGL  199 (260)
T ss_pred             eeeeeeeehhhhhcCCCCC--CCCcceEEEeeceeeeecCccchhhhhcccCceEeeechhhhhcc-cCceEEEeecccc
Confidence            9999999999888655421  123479999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCC-CCCCHHHHHHHHHHh
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYL  202 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L  202 (208)
                      .+||+...  .++.........+|.+ |.+.|.|-+..+-..
T Consensus       200 f~tpllss--lpekv~~fla~~ipfpsrlg~p~eyahlvqai  239 (260)
T KOG1199|consen  200 FDTPLLSS--LPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAI  239 (260)
T ss_pred             cCChhhhh--hhHHHHHHHHHhCCCchhcCChHHHHHHHHHH
Confidence            99997543  3444555566777766 788888877765443

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.7e-24  Score=160.34  Aligned_cols=173  Identities=15%  Similarity=0.070  Sum_probs=139.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+.    +.++.++.||++|.+++.++++++..   .+|.+|+|+|........+.+.++|++++++|+.
T Consensus        32 ~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~  104 (240)
T PRK06101         32 GRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVL  104 (240)
T ss_pred             ECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHH
Confidence            5777766655432    34688899999999999999887642   5799999998754444455788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|..          +++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+++.++||+
T Consensus       105 ~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~pg~  173 (240)
T PRK06101        105 GVANCIEGIQPHLSC----------GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR-PKGIEVVTVFPGF  173 (240)
T ss_pred             HHHHHHHHHHHhhhc----------CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH-hcCceEEEEeCCc
Confidence            999999999999853          46799999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      ++|++......            ......+++++++.++..+.
T Consensus       174 i~t~~~~~~~~------------~~~~~~~~~~~a~~i~~~i~  204 (240)
T PRK06101        174 VATPLTDKNTF------------AMPMIITVEQASQEIRAQLA  204 (240)
T ss_pred             CCCCCcCCCCC------------CCCcccCHHHHHHHHHHHHh
Confidence            99986543210            01123577888877776543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=7.7e-25  Score=158.12  Aligned_cols=174  Identities=17%  Similarity=0.108  Sum_probs=147.1

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPA--EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ...+..|++...-+.++++..++..|+.|++|||||...+ ...  ...+.++|++.++.|+++.+.+.+.++|.+++..
T Consensus        56 ~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p  135 (253)
T KOG1204|consen   56 FVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP  135 (253)
T ss_pred             cceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC
Confidence            3456678888888899999999999999999999999987 322  3678899999999999999999999999998863


Q ss_pred             CCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC----ChH
Q 028508           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APE  174 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~----~~~  174 (208)
                             ..+.+||+||.++.+++.+|..||.+|+|.++|++.||.|-  +.+|+|.++.||.++|+|...-.    ...
T Consensus       136 -------~~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~EE--p~~v~vl~~aPGvvDT~mq~~ir~~~~~~p  206 (253)
T KOG1204|consen  136 -------VNGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASEE--PFDVRVLNYAPGVVDTQMQVCIRETSRMTP  206 (253)
T ss_pred             -------ccCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhcC--ccceeEEEccCCcccchhHHHHhhccCCCH
Confidence                   15889999999999999999999999999999999999985  46999999999999999865421    233


Q ss_pred             HHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          175 EIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      .....+.+....++..+|...|..+..|+-
T Consensus       207 ~~l~~f~el~~~~~ll~~~~~a~~l~~L~e  236 (253)
T KOG1204|consen  207 ADLKMFKELKESGQLLDPQVTAKVLAKLLE  236 (253)
T ss_pred             HHHHHHHHHHhcCCcCChhhHHHHHHHHHH
Confidence            445566666777889999999999888753

>PRK08017 oxidoreductase; Provisional

Probab=99.92  E-value=7e-23  Score=156.91  Aligned_cols=190  Identities=19%  Similarity=0.130  Sum_probs=150.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++.+.    ..  .+..+.+|++|.+++..+++.+.... +++|++|||+|.....++.+.+.++++..+++|+
T Consensus        33 ~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~  106 (256)
T PRK08017         33 CRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNF  106 (256)
T ss_pred             eCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhh
Confidence            56666655432    22  36778999999999999999887754 6899999999987666777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.+++.+++.+.+.+        .++||++||..+..+.++...|+++|++++.++++++.++. ++|++++.++||
T Consensus       107 ~g~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg  177 (256)
T PRK08017        107 FGTHQLTMLLLPAMLPHG--------EGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELR-HSGIKVSLIEPG  177 (256)
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEeCC
Confidence            999999999999998875        67899999999998889999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|++....................+.+.+++|+++.+..++++.
T Consensus       178 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  223 (256)
T PRK08017        178 PIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESP  223 (256)
T ss_pred             CcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCC
Confidence            9998754432111100000011111123579999999999988654

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-22  Score=154.50  Aligned_cols=188  Identities=15%  Similarity=0.147  Sum_probs=148.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+.++++.+.....+.++.++.+|++|++++..++.      +++|+||||||.....++.+.+.+.++..+++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  106 (257)
T PRK09291         33 VQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVF  106 (257)
T ss_pred             eCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhH
Confidence            577777777777666666678889999999999877653      48999999999988778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+++.+.+.+        .++||++||..+..+.++...|+++|++++.+++.++.++. +.||+++.|+||+
T Consensus       107 ~~~~~~~~~~~~~~~~~--------~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~~~~v~pg~  177 (257)
T PRK09291        107 GPLELTQGFVRKMVARG--------KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELK-PFGIQVATVNPGP  177 (257)
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCc
Confidence            99999999999998765        57899999999888888899999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCC-hHHH---HHh----hhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLA-PEEI---RSK----ATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~-~~~~---~~~----~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +.|++...... ...+   ...    .....+. ...+++|++..++.++.+
T Consensus       178 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        178 YLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             ccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhcC
Confidence            98875432110 0000   000    0011122 236888998888876643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.91  E-value=5e-24  Score=161.19  Aligned_cols=160  Identities=18%  Similarity=0.196  Sum_probs=140.0

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIE   77 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~   77 (208)
                      +||+++||+.+.+||.+. +.++.++.+|.++.+++-+-+.+.... ..|.++|||+|...  |..+.+.+.+.+++.++
T Consensus        79 IsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~  157 (312)
T KOG1014|consen   79 ISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LDVGILVNNVGMSYDYPESFLKYPEGELQNIIN  157 (312)
T ss_pred             EeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-CceEEEEecccccCCCcHHHHhCchhhhhheeE
Confidence            589999999999999886 456788999999988833333222221 26779999999887  57788888889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+...+++.++|.|.+++        +|.||++||.++..+.|.++.|+++|++++.|+++|+.|+. .+||.|-++
T Consensus       158 vN~~~~~~~t~~ilp~M~~r~--------~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~-~~gI~Vq~v  228 (312)
T KOG1014|consen  158 VNILSVTLLTQLILPGMVERK--------KGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYE-SKGIFVQSV  228 (312)
T ss_pred             EecchHHHHHHHhhhhhhcCC--------CceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEe
Confidence            999999999999999999977        89999999999999999999999999999999999999998 999999999


Q ss_pred             ecCcccCCCccCC
Q 028508          158 APGPIKDTAGVSK  170 (208)
Q Consensus       158 ~pG~v~t~~~~~~  170 (208)
                      .|+.|-|++....
T Consensus       229 ~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  229 IPYLVATKMAKYR  241 (312)
T ss_pred             ehhheeccccccC
Confidence            9999999876543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3.8e-22  Score=151.23  Aligned_cols=184  Identities=24%  Similarity=0.256  Sum_probs=147.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++... .++..+.+|+++.+++.++++++...++++|.+|+++|......+.  +.++++.++++|+.
T Consensus        36 ~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~  112 (238)
T PRK05786         36 SRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIK  112 (238)
T ss_pred             eCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhch
Confidence            57777777776766553 3688899999999999999999988889999999999875543333  34889999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.+.+.++|.+.+          ++++|++||..+. .+.+....|+++|++++.+++.++.++. ++||+++.|+||
T Consensus       113 ~~~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~-~~gi~v~~i~pg  181 (238)
T PRK05786        113 IPLYAVNASLRFLKE----------GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELL-GRGIRVNGIAPT  181 (238)
T ss_pred             HHHHHHHHHHHHHhc----------CCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecC
Confidence            999999999998854          5789999998764 3567788899999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcC-CCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++...    ..+ ..   ..+. .+..+++|+++.+++++++.+
T Consensus       182 ~v~~~~~~~----~~~-~~---~~~~~~~~~~~~~va~~~~~~~~~~~  221 (238)
T PRK05786        182 TISGDFEPE----RNW-KK---LRKLGDDMAPPEDFAKVIIWLLTDEA  221 (238)
T ss_pred             ccCCCCCch----hhh-hh---hccccCCCCCHHHHHHHHHHHhcccc
Confidence            999875311    111 11   1111 235789999999999998754

>PRK08264 short chain dehydrogenase; Validated

Probab=99.90  E-value=1.4e-21  Score=148.22  Aligned_cols=137  Identities=27%  Similarity=0.313  Sum_probs=122.8

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (208)
                      +.++.++.+|++|.+++.++++.    ++++|++||++|. .....+.+.+.+++...+++|+.+++.+++++.+.+...
T Consensus        48 ~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  123 (238)
T PRK08264         48 GPRVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN  123 (238)
T ss_pred             CCceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            45688899999999999887764    4689999999998 445677788999999999999999999999999999876


Q ss_pred             CCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           98 GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        98 ~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      +        .++||++||..+..+.+++..|+++|++++.+++.++.++. ++|++++.++||.++|++..
T Consensus       124 ~--------~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~v~pg~v~t~~~~  185 (238)
T PRK08264        124 G--------GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELA-PQGTRVLGVHPGPIDTDMAA  185 (238)
T ss_pred             C--------CCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeCCcccccccc
Confidence            5        68899999999999899999999999999999999999998 88999999999999988643

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.2e-21  Score=144.44  Aligned_cols=180  Identities=21%  Similarity=0.221  Sum_probs=144.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++    ..+.++.+|++|.+++.++++.+    +++|++||++|......+.+.+.++|..++++|+.
T Consensus        33 ~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  104 (227)
T PRK08219         33 GRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVV  104 (227)
T ss_pred             eCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence            56666655544332    24778999999999998877653    58999999999877666777889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+++.+.+.         .+++|++||..+..+.++...|+.+|++++.+++.++.++. .. ++++.++||+
T Consensus       105 ~~~~~~~~~~~~~~~~---------~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~-~~-i~~~~i~pg~  173 (227)
T PRK08219        105 APAELTRLLLPALRAA---------HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEP-GN-VRVTSVHPGR  173 (227)
T ss_pred             HHHHHHHHHHHHHHhC---------CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhc-CC-ceEEEEecCC
Confidence            9999999999988765         47899999999988888999999999999999999999886 55 9999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++++......      .......+..++.+++|+++.++++++..
T Consensus       174 ~~~~~~~~~~------~~~~~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        174 TDTDMQRGLV------AQEGGEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             ccchHhhhhh------hhhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence            9876432211      00111223456789999999999998764

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-21  Score=146.55  Aligned_cols=136  Identities=19%  Similarity=0.210  Sum_probs=117.2

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ++.++.+|++|++++.++++.+.+  +++|++|||+|...+  .++.+.+.++++..+++|+.+++.+++.+.+.+... 
T Consensus        46 ~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-  122 (225)
T PRK08177         46 GVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-  122 (225)
T ss_pred             ccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-
Confidence            467788999999999999988854  489999999998643  356678889999999999999999999999988642 


Q ss_pred             CCCCCCCCCceEEEeccccccccC---CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           99 RGQASSSSGGIIINISATLHYTAT---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~---~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                              .+.++++||..+..+.   .++..|+++|++++.|+++++.|+. ++||+|++|+||+++|++..
T Consensus       123 --------~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        123 --------QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELG-EPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             --------CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhh-cCCeEEEEEcCCceecCCCC
Confidence                    4789999998765542   4667899999999999999999998 88999999999999998754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.7e-20  Score=139.85  Aligned_cols=147  Identities=19%  Similarity=0.192  Sum_probs=117.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.+.++++.    ..  .+.++.+|+++.+++.++++++..  +++|++|||+|....  ..+.+.+.++|+..+++|
T Consensus        32 ~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n  103 (222)
T PRK06953         32 ARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTN  103 (222)
T ss_pred             ECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhh
Confidence            45655554432    22  245789999999999998877643  479999999998632  445667899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch---hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ---IHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~---~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      +.+++.+++.+.|.|...         ++++|+++|..+..+....   ..|+++|++++.+++.++.++.   +++|+.
T Consensus       104 ~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~i~v~~  171 (222)
T PRK06953        104 VLGPMQLLPILLPLVEAA---------GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQAR---HATCIA  171 (222)
T ss_pred             hhhHHHHHHHHHHhhhcc---------CCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhcc---CcEEEE
Confidence            999999999999988553         5789999998776553322   3599999999999999998864   699999


Q ss_pred             eecCcccCCCcc
Q 028508          157 IAPGPIKDTAGV  168 (208)
Q Consensus       157 v~pG~v~t~~~~  168 (208)
                      |+||+++|++..
T Consensus       172 v~Pg~i~t~~~~  183 (222)
T PRK06953        172 LHPGWVRTDMGG  183 (222)
T ss_pred             ECCCeeecCCCC
Confidence            999999998754

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-19  Score=135.82  Aligned_cols=149  Identities=11%  Similarity=0.056  Sum_probs=111.5

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (208)
                      ..+.+|++|.+++.+       .++++|++|||||....   .+.+.++|+.++++|+.+++.+++.++|.|+++..+  
T Consensus        61 ~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~--  128 (245)
T PRK12367         61 EWIKWECGKEESLDK-------QLASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQ--  128 (245)
T ss_pred             eEEEeeCCCHHHHHH-------hcCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccC--
Confidence            568899999988764       35689999999997532   346789999999999999999999999999764210  


Q ss_pred             CCCCCceEEEeccccccccCCchhHHHHhHHHHHHHH---HHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHh
Q 028508          103 SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT---RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (208)
Q Consensus       103 ~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~---~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~  179 (208)
                         .++.+++.+|.++..+ ++...|+++|+|+..+.   +.++.|+. +.|++|+.++||+++|++..           
T Consensus       129 ---~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~-~~~i~v~~~~pg~~~t~~~~-----------  192 (245)
T PRK12367        129 ---IPKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNE-RKKLIIRKLILGPFRSELNP-----------  192 (245)
T ss_pred             ---CCeEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccEEEEecCCCcccccCc-----------
Confidence               0233444456555544 46778999999986543   44444556 78999999999999887420           


Q ss_pred             hhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          180 ATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                             ....+|+++|+.++++++..
T Consensus       193 -------~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        193 -------IGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             -------cCCCCHHHHHHHHHHHHhcC
Confidence                   12468999999999988653

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.84  E-value=1.1e-19  Score=170.82  Aligned_cols=145  Identities=13%  Similarity=0.044  Sum_probs=129.5

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (208)
                      .+++..+++.+.|.++.++.||++|.+++.++++++.+. ++||+||||||+.....+.+.+.++|++++++|+.|.+.+
T Consensus      2081 ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~L 2159 (2582)
T TIGR02813      2081 EIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSL 2159 (2582)
T ss_pred             HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            344556667777888999999999999999999999887 6899999999998888899999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                      ++++.+.+            .+.||++||..++.+.+++..|+++|++++.+++.++.++.   ++||++|+||+++|++
T Consensus      2160 l~al~~~~------------~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~---~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2160 LAALNAEN------------IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP---SAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHhC------------CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEECCeecCCc
Confidence            98887643            24599999999999999999999999999999999999875   4999999999999876


Q ss_pred             c
Q 028508          167 G  167 (208)
Q Consensus       167 ~  167 (208)
                      .
T Consensus      2225 ~ 2225 (2582)
T TIGR02813      2225 V 2225 (2582)
T ss_pred             c
Confidence            5

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.78  E-value=4.5e-17  Score=131.38  Aligned_cols=164  Identities=15%  Similarity=0.148  Sum_probs=116.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++++.   +.....++..+.+|++|.+++.+.       ++++|++|||||....   .+.+.+++++++++|+.
T Consensus       209 ~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~-------l~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~  275 (406)
T PRK07424        209 TSNSDKITLE---INGEDLPVKTLHWQVGQEAALAEL-------LEKVDILIINHGINVH---GERTPEAINKSYEVNTF  275 (406)
T ss_pred             eCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH-------hCCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHH
Confidence            4565554332   222233467789999999887654       3589999999997542   35788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.+++.++|.|++++.+.    .++.+|++|+ ++ ...+..+.|+++|+|+.+|++ ++++..   ++.|..+.||+
T Consensus       276 g~i~Li~a~lp~m~~~~~~~----~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~~---~~~I~~i~~gp  345 (406)
T PRK07424        276 SAWRLMELFFTTVKTNRDKA----TKEVWVNTSE-AE-VNPAFSPLYELSKRALGDLVT-LRRLDA---PCVVRKLILGP  345 (406)
T ss_pred             HHHHHHHHHHHHHHhcCCCC----CCeEEEEEcc-cc-ccCCCchHHHHHHHHHHHHHH-HHHhCC---CCceEEEEeCC
Confidence            99999999999998754110    1345667665 33 333456789999999999974 544433   46677788999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|++..                  ....+|+++|+.++++++..
T Consensus       346 ~~t~~~~------------------~~~~spe~vA~~il~~i~~~  372 (406)
T PRK07424        346 FKSNLNP------------------IGVMSADWVAKQILKLAKRD  372 (406)
T ss_pred             CcCCCCc------------------CCCCCHHHHHHHHHHHHHCC
Confidence            8876420                  12468999999999988664

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.78  E-value=9.9e-18  Score=120.94  Aligned_cols=134  Identities=18%  Similarity=0.135  Sum_probs=115.9

Q ss_pred             HHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           13 AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK   92 (208)
Q Consensus        13 ~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   92 (208)
                      +++...+.++..+.+|+++++++.++++.+...++++|++||++|......+.+.+.++++.++++|+.+++.+.+.+.+
T Consensus        46 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (180)
T smart00822       46 AELEALGAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD  125 (180)
T ss_pred             HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc
Confidence            45555566788899999999999999999998889999999999987666677888999999999999999999998732


Q ss_pred             HHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           93 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        93 ~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                          .+        .+++|++||..+..+.++...|+++|+++..+++.++     ..|+++..+.||++.
T Consensus       126 ----~~--------~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~~~-----~~~~~~~~~~~g~~~  179 (180)
T smart00822      126 ----LP--------LDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAHRR-----ARGLPATSINWGAWA  179 (180)
T ss_pred             ----CC--------cceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHHHH-----hcCCceEEEeecccc
Confidence                22        5789999999999899999999999999999998764     457889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.76  E-value=3.8e-18  Score=124.17  Aligned_cols=140  Identities=20%  Similarity=0.180  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (208)
                      ..++..++++..+.++.++.||++|++++.++++.+.+++++|++|||.+|...+..+.+.++++++.++...+.|...+
T Consensus        40 ~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L  119 (181)
T PF08659_consen   40 EAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNL  119 (181)
T ss_dssp             THHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHH
Confidence            45678888888888999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      .+.+.+.    .        -..+|++||+.+..+.+++..|+++.+.++.|++..+.     .|.++.+|+.|.+.
T Consensus       120 ~~~~~~~----~--------l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~~~~-----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  120 HEALENR----P--------LDFFILFSSISSLLGGPGQSAYAAANAFLDALARQRRS-----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHTTT----T--------TSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEE-EBS
T ss_pred             HHHhhcC----C--------CCeEEEECChhHhccCcchHhHHHHHHHHHHHHHHHHh-----CCCCEEEEEccccC
Confidence            9987652    1        35599999999999999999999999999999997654     25678899988765

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.70  E-value=1.4e-16  Score=117.25  Aligned_cols=162  Identities=17%  Similarity=0.153  Sum_probs=137.7

Q ss_pred             CCcHHHHHHHHHHHHhcCC----CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC------------
Q 028508            2 GRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------------   65 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~------------   65 (208)
                      .|+-++.+++++.|.+...    ++.++.+|+++..++.++..++.++|.++|.++.|||.+....+.            
T Consensus        39 cR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnp  118 (341)
T KOG1478|consen   39 CRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNP  118 (341)
T ss_pred             eCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhch
Confidence            6899999999999988643    577899999999999999999999999999999999987654321            


Q ss_pred             ---------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------
Q 028508           66 ---------------DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------  121 (208)
Q Consensus        66 ---------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------  121 (208)
                                     ..+.|++..+++.|+.|++.+.+.+.|++....        ...+|++||..+...         
T Consensus       119 v~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~--------~~~lvwtSS~~a~kk~lsleD~q~  190 (341)
T KOG1478|consen  119 VIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSD--------NPQLVWTSSRMARKKNLSLEDFQH  190 (341)
T ss_pred             hHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCC--------CCeEEEEeecccccccCCHHHHhh
Confidence                           346688899999999999999999999998765        568999999987652         


Q ss_pred             CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC
Q 028508          122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA  172 (208)
Q Consensus       122 ~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~  172 (208)
                      ..+...|+.||.+.+-+.-++-+.+. +.|+--.+++||...|.++.....
T Consensus       191 ~kg~~pY~sSKrl~DlLh~A~~~~~~-~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  191 SKGKEPYSSSKRLTDLLHVALNRNFK-PLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hcCCCCcchhHHHHHHHHHHHhcccc-ccchhhhcccCceeecchhhhhhh
Confidence            34566799999999999998888887 889999999999988776655443

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.68  E-value=1.8e-15  Score=125.32  Aligned_cols=175  Identities=11%  Similarity=0.018  Sum_probs=125.4

Q ss_pred             CCcHHHHHHHHHHHHhc-----C----CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-----G----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF   72 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-----~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~   72 (208)
                      .|+.++++.+.+++...     +    .++.++.+|++|.+++.+.       ++++|+||||+|....      ...+|
T Consensus       111 ~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-------LggiDiVVn~AG~~~~------~v~d~  177 (576)
T PLN03209        111 VRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-------LGNASVVICCIGASEK------EVFDV  177 (576)
T ss_pred             eCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-------hcCCCEEEEccccccc------cccch
Confidence            58888888877766431     2    3578899999999887653       3689999999986532      12246


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                      ...+++|+.|+.++++++...    +        .++||++||.++. .+.+.. .|. +|+++..+.+.+..++. ..|
T Consensus       178 ~~~~~VN~~Gt~nLl~Aa~~a----g--------VgRIV~VSSiga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~-~sG  242 (576)
T PLN03209        178 TGPYRIDYLATKNLVDAATVA----K--------VNHFILVTSLGTNKVGFPAA-ILN-LFWGVLCWKRKAEEALI-ASG  242 (576)
T ss_pred             hhHHHHHHHHHHHHHHHHHHh----C--------CCEEEEEccchhcccCcccc-chh-hHHHHHHHHHHHHHHHH-HcC
Confidence            788999999999999887542    2        4789999998764 333322 243 77888888888888888 889


Q ss_pred             eEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       152 i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++.|+||++++++.... ..... .......+.++.+..+|||+.++||+++.
T Consensus       243 IrvTIVRPG~L~tp~d~~~-~t~~v-~~~~~d~~~gr~isreDVA~vVvfLasd~  295 (576)
T PLN03209        243 LPYTIVRPGGMERPTDAYK-ETHNL-TLSEEDTLFGGQVSNLQVAELMACMAKNR  295 (576)
T ss_pred             CCEEEEECCeecCCccccc-cccce-eeccccccCCCccCHHHHHHHHHHHHcCc
Confidence            9999999999987643211 01111 11122356677899999999999999954

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.63  E-value=2.9e-14  Score=112.80  Aligned_cols=146  Identities=14%  Similarity=0.085  Sum_probs=111.7

Q ss_pred             HHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-----------------CC-------
Q 028508           10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-----------------AE-------   65 (208)
Q Consensus        10 ~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-----------------~~-------   65 (208)
                      .+.+.+...|..+..+.||++++++++++++++.+.+|+||+||||+|+.....                 +.       
T Consensus        93 a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~  172 (398)
T PRK13656         93 AFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTD  172 (398)
T ss_pred             HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCccccc
Confidence            344445555667788999999999999999999999999999999999874311                 11       


Q ss_pred             ----------CCCHHHHHHHHHHHHHHH---HHH--HHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch--hHH
Q 028508           66 ----------DLSPNGFRTVIEIDSVGT---FIM--CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHV  128 (208)
Q Consensus        66 ----------~~~~~~~~~~~~~n~~~~---~~l--~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y  128 (208)
                                ..+.++++.++++  +|.   ..+  .+...+.|.+          ++++|.+|...+....|.+  ..-
T Consensus       173 ~~~i~~~s~~~~~~~ei~~Tv~v--Mggedw~~Wi~al~~a~lla~----------g~~~va~TY~G~~~t~p~Y~~g~m  240 (398)
T PRK13656        173 KDVIIEVTVEPATEEEIADTVKV--MGGEDWELWIDALDEAGVLAE----------GAKTVAYSYIGPELTHPIYWDGTI  240 (398)
T ss_pred             ccceeEEEEeeCCHHHHHHHHHh--hccchHHHHHHHHHhcccccC----------CcEEEEEecCCcceeecccCCchH
Confidence                      2445566655444  443   223  3333333322          6899999999988888877  488


Q ss_pred             HHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       129 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      +.+|+++++-++.|+.+|+ +.|+|+|++.+|++.|....
T Consensus       241 G~AKa~LE~~~r~La~~L~-~~giran~i~~g~~~T~Ass  279 (398)
T PRK13656        241 GKAKKDLDRTALALNEKLA-AKGGDAYVSVLKAVVTQASS  279 (398)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCcccchhhh
Confidence            9999999999999999999 89999999999999986433

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.62  E-value=7.1e-14  Score=110.77  Aligned_cols=172  Identities=17%  Similarity=0.089  Sum_probs=119.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+..+...+.+.+.  +.++.++.+|++|.+++.++++       ++|+|||+||.... +..+.+   ....+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~  103 (324)
T TIGR03589        37 SRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQV-PAAEYN---PFECIRTNIN  103 (324)
T ss_pred             cCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCCC-chhhcC---HHHHHHHHHH
Confidence            344444433333332  2467889999999999888764       59999999996532 222223   3468999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.+++++.+.    +        .++||++||.....+   ...|+++|++.+.+++.++.+.. ..|++++.++||.
T Consensus       104 g~~~ll~aa~~~----~--------~~~iV~~SS~~~~~p---~~~Y~~sK~~~E~l~~~~~~~~~-~~gi~~~~lR~g~  167 (324)
T TIGR03589       104 GAQNVIDAAIDN----G--------VKRVVALSTDKAANP---INLYGATKLASDKLFVAANNISG-SKGTRFSVVRYGN  167 (324)
T ss_pred             HHHHHHHHHHHc----C--------CCEEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHhhcc-ccCcEEEEEeecc
Confidence            999999998752    2        467999999755433   46799999999999999988777 7899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhh---hcC------CCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDY---MAA------YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~dva~~~~~L~s~  205 (208)
                      +.+|...  .. ..+.......   .+.      +.+...+|++++++.++..
T Consensus       168 v~G~~~~--~i-~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       168 VVGSRGS--VV-PFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             eeCCCCC--cH-HHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence            9986421  11 1122211111   221      2357899999999888743

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.54  E-value=4.9e-13  Score=106.00  Aligned_cols=160  Identities=13%  Similarity=0.046  Sum_probs=114.4

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|+++.+++.++++       ++|+|||+||....    ..+.+.+...+++|+.+++.+++++.+.+   + 
T Consensus        56 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~-  120 (325)
T PLN02989         56 ERLKLFKADLLDEGSFELAID-------GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---S-  120 (325)
T ss_pred             CceEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-
Confidence            367889999999999888775       58999999996432    23445678899999999999999987642   1 


Q ss_pred             CCCCCCCCceEEEeccccccccCC----------------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508          100 GQASSSSGGIIINISATLHYTATW----------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~----------------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                             .++||++||..+..+..                      ....|+.+|.+.+.+++.+..+.    |+.++.+
T Consensus       121 -------~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~il  189 (325)
T PLN02989        121 -------VKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN----EIDLIVL  189 (325)
T ss_pred             -------ceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc----CCeEEEE
Confidence                   36799999986543211                      02469999999999998876543    6899999


Q ss_pred             ecCcccCCCccCCC--ChHHHHHhhhhhhcC----CCCCCHHHHHHHHHHhcCC
Q 028508          158 APGPIKDTAGVSKL--APEEIRSKATDYMAA----YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       158 ~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+.+++|......  ....+........+.    +.+...+|+|++++.++..
T Consensus       190 R~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~  243 (325)
T PLN02989        190 NPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALET  243 (325)
T ss_pred             cCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence            99999988654321  111222222222222    3567789999999988754

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.50  E-value=1.9e-12  Score=103.63  Aligned_cols=163  Identities=16%  Similarity=0.157  Sum_probs=115.2

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++..     ++|+|||+|+....    ..+.+++...+++|+.+++.+++++...   .. 
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~-  118 (349)
T TIGR02622        52 KKIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GS-  118 (349)
T ss_pred             CCceEEEccCCCHHHHHHHHhhc-----CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CC-
Confidence            35677899999999999888753     69999999995432    3345567788999999999999987421   11 


Q ss_pred             CCCCCCCCceEEEeccccccc------------cCCchhHHHHhHHHHHHHHHHHHHHhcCC----CCeEEEEeecCccc
Q 028508          100 GQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGPIK  163 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~----~gi~v~~v~pG~v~  163 (208)
                             .++||++||...+.            +..+...|+.+|.+.+.+++.++.++. +    +|++++.++|+.++
T Consensus       119 -------~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~i~~~~lR~~~vy  190 (349)
T TIGR02622       119 -------VKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFF-GVANFHGIKIASARAGNVI  190 (349)
T ss_pred             -------CCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhh-cccccCCCcEEEEccCccc
Confidence                   35799999964331            123467799999999999999998875 3    48999999999999


Q ss_pred             CCCccC--CCChHHHHHhhhhh--------hcCCCCCCHHHHHHHHHHhcC
Q 028508          164 DTAGVS--KLAPEEIRSKATDY--------MAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       164 t~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~L~s  204 (208)
                      +|....  ...+ .+.......        ...+.+...+|++++++.++.
T Consensus       191 Gp~~~~~~~~~~-~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       191 GGGDWAEDRLIP-DVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             CCCcchhhhhhH-HHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHH
Confidence            874311  1111 122212111        112345677899999887654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.40  E-value=3.2e-11  Score=96.76  Aligned_cols=169  Identities=19%  Similarity=0.084  Sum_probs=115.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++.     .++|+|||+||....    +.+.+.++..+++|+.++..+++++.+.+......
T Consensus        52 ~~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~  122 (355)
T PRK10217         52 RFAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED  122 (355)
T ss_pred             ceEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhccccc
Confidence            566789999999999888775     269999999986432    23345678899999999999999998754211000


Q ss_pred             CCCCCCCceEEEeccccccc-------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          101 QASSSSGGIIINISATLHYT-------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~-------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                         .....++|++||...+.             +..+.+.|+.+|.+.+.+++.++.++    |+++..++|+.+..|..
T Consensus       123 ---~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        123 ---KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY----GLPTLITNCSNNYGPYH  195 (355)
T ss_pred             ---ccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCC
Confidence               00024799999964321             22356779999999999999987765    47888999999988754


Q ss_pred             cCCCChHHHHHhhhhh--hc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          168 VSKLAPEEIRSKATDY--MA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       168 ~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .....-..+.......  ++       .+.+...+|++++++.++..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        196 FPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             CcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            2211111111111111  11       22467899999999887654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.38  E-value=2.7e-11  Score=97.13  Aligned_cols=158  Identities=13%  Similarity=0.039  Sum_probs=109.6

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|+++.+.+.++++       .+|+|||+|+....   ..  .+.++..+++|+.++..+++++.+...     
T Consensus        57 ~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~~~---~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~-----  119 (351)
T PLN02650         57 RLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPMDF---ES--KDPENEVIKPTVNGMLSIMKACAKAKT-----  119 (351)
T ss_pred             ceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCCCC---CC--CCchhhhhhHHHHHHHHHHHHHHhcCC-----
Confidence            57789999999998887765       58999999985431   11  122356789999999999999875421     


Q ss_pred             CCCCCCCceEEEeccccccccC----C------------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508          101 QASSSSGGIIINISATLHYTAT----W------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~----~------------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                            .++||++||.....+.    +                  +...|+.+|.+.+.+++.++.+    +|++++.++
T Consensus       120 ------~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~gi~~~ilR  189 (351)
T PLN02650        120 ------VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE----NGLDFISII  189 (351)
T ss_pred             ------ceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH----cCCeEEEEC
Confidence                  2469999997533210    0                  1237999999999999888764    369999999


Q ss_pred             cCcccCCCccCCCChHHHHHh--hhh------hhcCCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSK--ATD------YMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+.+++|.......+......  ...      ....+.+...+|+++++++++..
T Consensus       190 p~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        190 PTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             CCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcC
Confidence            999999865432222111110  001      01224678999999999998864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.36  E-value=4e-11  Score=94.96  Aligned_cols=159  Identities=15%  Similarity=0.098  Sum_probs=108.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|+++.+++.++++       ++|+|||+|+.....     ..+.+...+++|+.++..+++++...   .+ 
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~-  119 (322)
T PLN02986         56 ERLKLFKADLLEESSFEQAIE-------GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PS-  119 (322)
T ss_pred             CceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CC-
Confidence            367889999999998888775       589999999864321     11223567899999999999887532   11 


Q ss_pred             CCCCCCCCceEEEeccccccc-cC----------------C-----chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508          100 GQASSSSGGIIINISATLHYT-AT----------------W-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-~~----------------~-----~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                             -++||++||..+.. +.                +     ....|+.+|.+.+.+++.+..+    +|++++.+
T Consensus       120 -------v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~~~~~~~l  188 (322)
T PLN02986        120 -------VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD----NGIDMVVL  188 (322)
T ss_pred             -------ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH----hCCeEEEE
Confidence                   25799999986431 11                0     1356999999988888877654    36999999


Q ss_pred             ecCcccCCCccCCCC-hHHHHHhhhhhh-----cCCCCCCHHHHHHHHHHhcCC
Q 028508          158 APGPIKDTAGVSKLA-PEEIRSKATDYM-----AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+.+.+|....... .......+....     ..+.+...+|+|++++.++..
T Consensus       189 rp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~  242 (322)
T PLN02986        189 NPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALET  242 (322)
T ss_pred             cccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcC
Confidence            999999886442211 111111111111     123477899999999988764

>PRK06720 hypothetical protein; Provisional

Probab=99.36  E-value=1.6e-11  Score=88.21  Aligned_cols=115  Identities=18%  Similarity=0.120  Sum_probs=90.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.+.++++.+++...+.+..++.+|+++.+++.++++++.+.+|++|++|||||.... ..+++.+.++ ++  ..|+
T Consensus        47 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~  123 (169)
T PRK06720         47 DIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCI  123 (169)
T ss_pred             ECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceec
Confidence            577777888888887666677789999999999999999999999999999999998764 4555545544 44  5677


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT  120 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~  120 (208)
                      .+.+..++.+.+.|.+++ +.-..++.|++..||+.+...
T Consensus       124 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720        124 NDVWIEIKQLTSSFMKQQ-EEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             cHHHHHHHHHHHHHHhcC-CEEEeecCceeeEeccccccc
Confidence            788999999999998764 222245689999999986543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.35  E-value=9.2e-11  Score=94.12  Aligned_cols=180  Identities=14%  Similarity=0.046  Sum_probs=117.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-CCCCCHHHH--HHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGF--RTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~--~~~~~~   78 (208)
                      +|+.++.+.+...+.. +.++.++.+|+++.+++.++++       .+|+|||+|+...... ....+++.+  .+++++
T Consensus        41 ~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~  112 (353)
T PLN02896         41 LRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDP  112 (353)
T ss_pred             eCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHH
Confidence            3555555555444432 3467889999999998877764       5899999999765321 122233333  467788


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-------------------------CchhHHHHhHH
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------------------------WYQIHVSAAKA  133 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-------------------------~~~~~y~~sKa  133 (208)
                      |+.++..+++++.+..   .        .++||++||...+...                         +....|+.+|.
T Consensus       113 ~~~g~~~ll~~~~~~~---~--------~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~  181 (353)
T PLN02896        113 AIKGTLNVLKSCLKSK---T--------VKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKL  181 (353)
T ss_pred             HHHHHHHHHHHHHhcC---C--------ccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHH
Confidence            8999999999886532   1        3579999997654311                         01237999999


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCCh--HHHHHhhhhhhc-------------CCCCCCHHHHHHH
Q 028508          134 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMA-------------AYKFGEKWDIAMA  198 (208)
Q Consensus       134 a~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~dva~~  198 (208)
                      +.+.+++.++.++    |+++..++|+.+..|......+.  ............             .+-+...+|++++
T Consensus       182 ~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a  257 (353)
T PLN02896        182 LTEEAAFKYAKEN----GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDA  257 (353)
T ss_pred             HHHHHHHHHHHHc----CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHH
Confidence            9999998876543    69999999999998865432211  111110001000             1135789999999


Q ss_pred             HHHhcC
Q 028508          199 ALYLAS  204 (208)
Q Consensus       199 ~~~L~s  204 (208)
                      ++.++.
T Consensus       258 ~~~~l~  263 (353)
T PLN02896        258 HIFLME  263 (353)
T ss_pred             HHHHHh
Confidence            998875

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.34  E-value=6.2e-11  Score=93.31  Aligned_cols=161  Identities=20%  Similarity=0.120  Sum_probs=111.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|++++.++++..     ++|+|||+|+....    +...+.++..+++|+.++..+++++...+.     
T Consensus        51 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----  116 (317)
T TIGR01181        51 RYRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWH-----  116 (317)
T ss_pred             CcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence            5778899999999998887643     59999999986442    223345677899999999999988765422     


Q ss_pred             CCCCCCCceEEEecccccccc------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          101 QASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                            +.++|++||...+..            ..+...|+.+|.+.+.+++.++.+.    |+++..++|+.+..+...
T Consensus       117 ------~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~i~G~~~~  186 (317)
T TIGR01181       117 ------EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY----GLPALITRCSNNYGPYQF  186 (317)
T ss_pred             ------CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCC
Confidence                  246999998643221            1234579999999999999887654    589999999999877543


Q ss_pred             CCCChHHHHHhhhhh--hc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          169 SKLAPEEIRSKATDY--MA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ....-..+.......  ++       ...+...+|+++++..++.+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~  232 (317)
T TIGR01181       187 PEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK  232 (317)
T ss_pred             cccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC
Confidence            221111111111111  11       11245789999999988754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02214 cinnamoyl-CoA reductase

Probab=99.29  E-value=2.4e-10  Score=91.37  Aligned_cols=154  Identities=11%  Similarity=0.022  Sum_probs=107.7

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       ++|+|||+|+...         +++...+++|+.++..+++++...    + 
T Consensus        60 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~-  118 (342)
T PLN02214         60 ERLILCKADLQDYEALKAAID-------GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----K-  118 (342)
T ss_pred             CcEEEEecCcCChHHHHHHHh-------cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----C-
Confidence            357788999999998888765       5999999998531         235678999999999999987642    2 


Q ss_pred             CCCCCCCCceEEEeccccccccC---------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508          100 GQASSSSGGIIINISATLHYTAT---------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~---------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                             -++||++||..+..+.                     .....|+.+|.+.+.+++.++.++    |+++..++
T Consensus       119 -------v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----g~~~v~lR  187 (342)
T PLN02214        119 -------VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK----GVDLVVLN  187 (342)
T ss_pred             -------CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc----CCcEEEEe
Confidence                   3579999997543211                     023469999999999988876543    69999999


Q ss_pred             cCcccCCCccCCCCh--HHHHHhhhhhhc-----CCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAP--EEIRSKATDYMA-----AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+.|..|........  ..+........+     .+.+...+|+|++++.++..
T Consensus       188 p~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~  241 (342)
T PLN02214        188 PVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEA  241 (342)
T ss_pred             CCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence            999998864322111  111111111111     12456899999999988754

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.28  E-value=6.2e-11  Score=97.68  Aligned_cols=127  Identities=11%  Similarity=0.055  Sum_probs=96.2

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++..     ++|+|||+|+... ......++++++..+++|+.|++++++++...-.    
T Consensus       113 ~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv----  182 (442)
T PLN02572        113 KEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP----  182 (442)
T ss_pred             CcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence            45788999999999999888763     6999999997543 2333345566778889999999999998765311    


Q ss_pred             CCCCCCCCceEEEecccccccc------------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508          100 GQASSSSGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~------------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                             ..++|++||...+..                        ..+...|+.+|.+.+.+++..+..    +|+++.
T Consensus       183 -------~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~----~gl~~v  251 (442)
T PLN02572        183 -------DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA----WGIRAT  251 (442)
T ss_pred             -------CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh----cCCCEE
Confidence                   236999998764321                        123357999999999888877654    469999


Q ss_pred             EeecCcccCCCc
Q 028508          156 GIAPGPIKDTAG  167 (208)
Q Consensus       156 ~v~pG~v~t~~~  167 (208)
                      .++|+.++.|..
T Consensus       252 ~lR~~~vyGp~~  263 (442)
T PLN02572        252 DLNQGVVYGVRT  263 (442)
T ss_pred             EEecccccCCCC
Confidence            999999998864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.27  E-value=2.1e-10  Score=89.90  Aligned_cols=156  Identities=8%  Similarity=-0.050  Sum_probs=105.5

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+++.+++.       .+|+++|.++....     .. ..++.++++|+.|++.+++++.+.+   .
T Consensus        56 ~~~~~~~~~Dl~d~~~~~~~l~-------~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~  119 (297)
T PLN02583         56 EERLKVFDVDPLDYHSILDALK-------GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---T  119 (297)
T ss_pred             CCceEEEEecCCCHHHHHHHHc-------CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence            3467889999999998876553       68999886653221     11 2467899999999999999987643   1


Q ss_pred             CCCCCCCCCceEEEeccccccccC---C-------------ch------hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           99 RGQASSSSGGIIINISATLHYTAT---W-------------YQ------IHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~---~-------------~~------~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                              .++||++||..+....   +             ..      ..|+.+|...+.++..++++    +|++++.
T Consensus       120 --------v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~gi~~v~  187 (297)
T PLN02583        120 --------IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD----RGVNMVS  187 (297)
T ss_pred             --------ccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH----hCCcEEE
Confidence                    3579999998654211   0             00      15999999988888777543    3799999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhc--CCCCCCHHHHHHHHHHhcCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMA--AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|+.|.+|.......   .........+  ...+...+|+|++.+.++..
T Consensus       188 lrp~~v~Gp~~~~~~~---~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        188 INAGLLMGPSLTQHNP---YLKGAAQMYENGVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             EcCCcccCCCCCCchh---hhcCCcccCcccCcceEEHHHHHHHHHHHhcC
Confidence            9999999875432110   0000000001  12367889999999988764

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.27  E-value=2.9e-10  Score=91.17  Aligned_cols=170  Identities=17%  Similarity=0.087  Sum_probs=112.5

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++.     .++|+|||+|+.....    ...+..+..+++|+.|+..+++++.+.+.....
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~  120 (352)
T PRK10084         50 ERYVFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDE  120 (352)
T ss_pred             CceEEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhcccccc
Confidence            3567789999999999888875     2799999999865321    112234668999999999999999876532110


Q ss_pred             CCCCCCCCceEEEeccccccc---------------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508          100 GQASSSSGGIIINISATLHYT---------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~---------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .   .....++|++||...+.                     +..+...|+.+|.+.+.+++.++.++    |+++..++
T Consensus       121 ~---~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~vilr  193 (352)
T PRK10084        121 D---KKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY----GLPTIVTN  193 (352)
T ss_pred             c---cccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEe
Confidence            0   00024799999964332                     11245679999999999999987765    46778889


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhh--hc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDY--MA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+.+..|.......-..+.......  ++       ...+...+|++++++.++..
T Consensus       194 ~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~  249 (352)
T PRK10084        194 CSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTE  249 (352)
T ss_pred             ccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence            9888877532211111111111111  11       12357889999999887754

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.26  E-value=2e-10  Score=87.15  Aligned_cols=160  Identities=23%  Similarity=0.115  Sum_probs=113.8

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++++|++|.+.+.+++.+-     ++|+|+|-|+-..    .+-+.++-...+++|+.|++.++.++..+...   
T Consensus        51 ~~~~fv~~DI~D~~~v~~~~~~~-----~~D~VvhfAAESH----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---  118 (340)
T COG1088          51 PRYRFVQGDICDRELVDRLFKEY-----QPDAVVHFAAESH----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---  118 (340)
T ss_pred             CCceEEeccccCHHHHHHHHHhc-----CCCeEEEechhcc----ccccccChhhhhhcchHHHHHHHHHHHHhccc---
Confidence            47899999999999999998863     7999999998544    34455556677889999999999999887643   


Q ss_pred             CCCCCCCCceEEEecccccc-------------ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508          100 GQASSSSGGIIINISATLHY-------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~-------------~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                              .+++.||.--.+             .+..+.+.|++|||+-++|+++..+.+    |+.+...++.--+.|-
T Consensus       119 --------frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY----glp~~ItrcSNNYGPy  186 (340)
T COG1088         119 --------FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY----GLPATITRCSNNYGPY  186 (340)
T ss_pred             --------ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc----CCceEEecCCCCcCCC
Confidence                    248888765322             245678889999999999999998755    5889888887777775


Q ss_pred             ccCCCC-hHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcC
Q 028508          167 GVSKLA-PEEIRSKATDYMA---------AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       167 ~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s  204 (208)
                      ...+.. |..... ...+.|         .+.+...+|=++++...+.
T Consensus       187 qfpEKlIP~~I~n-al~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~  233 (340)
T COG1088         187 QFPEKLIPLMIIN-ALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT  233 (340)
T ss_pred             cCchhhhHHHHHH-HHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh
Confidence            554322 222222 222222         2234566677776665543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.25  E-value=5e-10  Score=89.40  Aligned_cols=112  Identities=16%  Similarity=0.076  Sum_probs=83.1

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++..+++..     .+|+|||+|+.....    ...+.....+++|+.++..+++++.+...+++.
T Consensus        60 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~  130 (340)
T PLN02653         60 ARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGR  130 (340)
T ss_pred             CceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            45788999999999999988864     599999999975432    223345677899999999999999877543210


Q ss_pred             CCCCCCCCceEEEecccccccc----------CCchhHHHHhHHHHHHHHHHHHHHhc
Q 028508          100 GQASSSSGGIIINISATLHYTA----------TWYQIHVSAAKAAVDSITRSLALEWG  147 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~----------~~~~~~y~~sKaa~~~~~~~la~e~~  147 (208)
                             -.++|++||...+..          ..+...|+.+|.+.+.+++.++.++.
T Consensus       131 -------~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  181 (340)
T PLN02653        131 -------QIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYG  181 (340)
T ss_pred             -------ceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC
Confidence                   125888887643321          12456799999999999999987764

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.24  E-value=1.9e-10  Score=89.23  Aligned_cols=178  Identities=13%  Similarity=0.057  Sum_probs=121.6

Q ss_pred             CCcHHHHHH--HHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~--~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      -|+++.-++  .+.++.....+...+..|+++++++..+++       +.|+|+|.|.......   .+  .-.++++.+
T Consensus        37 VR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------gcdgVfH~Asp~~~~~---~~--~e~~li~pa  104 (327)
T KOG1502|consen   37 VRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------GCDGVFHTASPVDFDL---ED--PEKELIDPA  104 (327)
T ss_pred             EcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------CCCEEEEeCccCCCCC---CC--cHHhhhhHH
Confidence            366666433  466666666678999999999999999987       7999999997544321   11  123688999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-C-----------ch----------hHHHHhHHHHHH
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W-----------YQ----------IHVSAAKAAVDS  137 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~-----------~~----------~~y~~sKaa~~~  137 (208)
                      +.|+.++++++...-.           =.+||++||.++.... +           .|          ..|+.+|.    
T Consensus       105 v~Gt~nVL~ac~~~~s-----------VkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~----  169 (327)
T KOG1502|consen  105 VKGTKNVLEACKKTKS-----------VKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKT----  169 (327)
T ss_pred             HHHHHHHHHHHhccCC-----------cceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHH----
Confidence            9999999999875431           2469999999887643 1           11          24777776    


Q ss_pred             HHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChH-HHHHhhhhh-h----cCC-CCCCHHHHHHHHHHhcCCC
Q 028508          138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDY-M----AAY-KFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       138 ~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~-~----~~~-~~~~~~dva~~~~~L~s~~  206 (208)
                      +++..|.+++.++|+....|+||.|..|......... .....+... .    ... .+...+|+|.+.++++-.+
T Consensus       170 lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~  245 (327)
T KOG1502|consen  170 LAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKP  245 (327)
T ss_pred             HHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCc
Confidence            4555566665455799999999999999877743321 111111111 1    111 2578899999999987654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.22  E-value=8.3e-10  Score=88.06  Aligned_cols=158  Identities=15%  Similarity=0.067  Sum_probs=107.8

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++..+++       ++|+|||+|+...   ..  ..+.+...+++|+.++..+++++.+..   +  
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~--  122 (338)
T PLN00198         60 DLKIFGADLTDEESFEAPIA-------GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---S--  122 (338)
T ss_pred             ceEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C--
Confidence            57789999999988877654       6899999998432   11  122345678999999999999986531   1  


Q ss_pred             CCCCCCCceEEEecccccccc------------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508          101 QASSSSGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~------------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                            .++||++||...+..                        .++...|+.+|.+.+.+++.++.+    +|+++..
T Consensus       123 ------~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~  192 (338)
T PLN00198        123 ------VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE----NNIDLIT  192 (338)
T ss_pred             ------ccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh----cCceEEE
Confidence                  357999999865431                        123456999999999998887654    3699999


Q ss_pred             eecCcccCCCccCCCCh--HHHHHhhhh---------hhc----CCCCCCHHHHHHHHHHhcCC
Q 028508          157 IAPGPIKDTAGVSKLAP--EEIRSKATD---------YMA----AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~--~~~~~~~~~---------~~~----~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++|+.|.+|........  .........         ..+    .+.+...+|++++++.++..
T Consensus       193 ~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        193 VIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             EeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            99999998853221111  000110000         111    12468899999999998764

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.22  E-value=1.2e-09  Score=75.79  Aligned_cols=159  Identities=20%  Similarity=0.089  Sum_probs=113.2

Q ss_pred             cCCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 028508           27 GDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFLVPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (208)
Q Consensus        27 ~D~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (208)
                      .|-+=-|+-+.+++++.+.++  ++|.+++.||.+.-+.-.. .-.++-+-+++..++....-.+.+..++++       
T Consensus        49 ~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-------  121 (236)
T KOG4022|consen   49 GNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-------  121 (236)
T ss_pred             CCcchhHHHHHHHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-------
Confidence            333334556677777776553  7999999999876432211 112344567777888877777777777765       


Q ss_pred             CCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEEeecCcccCCCccCCCChHHHHHhhhh
Q 028508          104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD  182 (208)
Q Consensus       104 ~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~  182 (208)
                         +|.+-..+.-.+..+.|++..|+++|+|.++++++|+.+-. -|.|--+..|-|=.++|||.+..+++.++..    
T Consensus       122 ---GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfss----  194 (236)
T KOG4022|consen  122 ---GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSS----  194 (236)
T ss_pred             ---CceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccC----
Confidence               67777778888889999999999999999999999998642 2568889999999999999887776544321    


Q ss_pred             hhcCCCCCCHHHHHHHHHHhcCC
Q 028508          183 YMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       183 ~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                            +...+.+++.++-+..+
T Consensus       195 ------WTPL~fi~e~flkWtt~  211 (236)
T KOG4022|consen  195 ------WTPLSFISEHFLKWTTE  211 (236)
T ss_pred             ------cccHHHHHHHHHHHhcc
Confidence                  34455666665555433

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.19  E-value=1.2e-09  Score=86.51  Aligned_cols=159  Identities=13%  Similarity=0.078  Sum_probs=106.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|+++++++..+++       ++|+|||+|+.....    . .+.....+++|+.++..+++++....   + 
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~----~-~~~~~~~~~~nv~gt~~ll~a~~~~~---~-  118 (322)
T PLN02662         55 ERLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFYHD----V-TDPQAELIDPAVKGTLNVLRSCAKVP---S-  118 (322)
T ss_pred             CceEEEeccccCcchHHHHHc-------CCCEEEEeCCcccCC----C-CChHHHHHHHHHHHHHHHHHHHHhCC---C-
Confidence            367889999999988877765       689999999864311    1 11224678999999999999876421   1 


Q ss_pred             CCCCCCCCceEEEecccccc-c-cCC--------------c------hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508          100 GQASSSSGGIIINISATLHY-T-ATW--------------Y------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~-~-~~~--------------~------~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                             -.+||++||..+. . +.+              +      ...|+.+|.+.+.+++.+..+    +|++++.+
T Consensus       119 -------~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~l  187 (322)
T PLN02662        119 -------VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE----NGIDMVTI  187 (322)
T ss_pred             -------CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH----cCCcEEEE
Confidence                   2479999997532 1 110              1      146999999988888776543    36999999


Q ss_pred             ecCcccCCCccCCC--ChHHHHHhhhh--hhc--CCCCCCHHHHHHHHHHhcCC
Q 028508          158 APGPIKDTAGVSKL--APEEIRSKATD--YMA--AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       158 ~pG~v~t~~~~~~~--~~~~~~~~~~~--~~~--~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+.+.+|......  ...........  ..+  ...+...+|+|++++.++..
T Consensus       188 Rp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        188 NPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             eCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcC
Confidence            99999988643221  11111111111  111  23468899999999988764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.12  E-value=5.1e-09  Score=83.73  Aligned_cols=109  Identities=17%  Similarity=0.082  Sum_probs=80.4

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++..     ++|+|||+|+......    ..+.-...+++|+.|+..+++++.+.-..+  
T Consensus        55 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--  123 (343)
T TIGR01472        55 ARMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK--  123 (343)
T ss_pred             cceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc--
Confidence            35788999999999999888864     6899999999754321    122235667889999999999987642111  


Q ss_pred             CCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHh
Q 028508          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                             ..++|++||...+.           +..+...|+.+|.+.+.+++.++.++
T Consensus       124 -------~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       124 -------SVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             -------CeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence                   23699999974332           12355689999999999999988765

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.08  E-value=6.5e-09  Score=79.53  Aligned_cols=152  Identities=13%  Similarity=0.037  Sum_probs=91.6

Q ss_pred             CCeeEEEcCCCCH-HHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028508           20 IPAIGLEGDVRKR-EDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (208)
Q Consensus        20 ~~~~~~~~D~~~~-~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (208)
                      .++.++.+|+++. +++.       +.+ .++|+||+++|......    ..    ..+++|..+...+++++.    +.
T Consensus        62 ~~~~~~~~Dl~d~~~~l~-------~~~~~~~d~vi~~~g~~~~~~----~~----~~~~~n~~~~~~ll~a~~----~~  122 (251)
T PLN00141         62 PSLQIVRADVTEGSDKLV-------EAIGDDSDAVICATGFRRSFD----PF----APWKVDNFGTVNLVEACR----KA  122 (251)
T ss_pred             CceEEEEeeCCCCHHHHH-------HHhhcCCCEEEECCCCCcCCC----CC----CceeeehHHHHHHHHHHH----Hc
Confidence            3578899999984 3222       222 37999999998643211    11    114577888888888763    33


Q ss_pred             CCCCCCCCCCceEEEeccccccc---cCCchhHHHHhHHHHHHHHHHHHHH--hcCCCCeEEEEeecCcccCCCccCCCC
Q 028508           98 GRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLA  172 (208)
Q Consensus        98 ~~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~sKaa~~~~~~~la~e--~~~~~gi~v~~v~pG~v~t~~~~~~~~  172 (208)
                      +        .++||++||...+.   +.+....|...|.+...+...+..|  +. ..|++++.|+||++.++.......
T Consensus       123 ~--------~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-~~gi~~~iirpg~~~~~~~~~~~~  193 (251)
T PLN00141        123 G--------VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIR-KSGINYTIVRPGGLTNDPPTGNIV  193 (251)
T ss_pred             C--------CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHH-hcCCcEEEEECCCccCCCCCceEE
Confidence            3        47899999986432   2223344666665444433333333  34 678999999999998654221110


Q ss_pred             hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                           . .........+.+++|+|+.++.++..
T Consensus       194 -----~-~~~~~~~~~~i~~~dvA~~~~~~~~~  220 (251)
T PLN00141        194 -----M-EPEDTLYEGSISRDQVAEVAVEALLC  220 (251)
T ss_pred             -----E-CCCCccccCcccHHHHHHHHHHHhcC
Confidence                 0 00001112357999999999999754

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.05  E-value=7.6e-09  Score=80.37  Aligned_cols=153  Identities=14%  Similarity=0.057  Sum_probs=105.7

Q ss_pred             EEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 028508           24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (208)
Q Consensus        24 ~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (208)
                      ++.+|++|.+++.++++       ++|+|||.|+......     ....+.++++|+.|+-++++++...    +     
T Consensus        49 ~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~-----  107 (280)
T PF01073_consen   49 YIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----G-----  107 (280)
T ss_pred             EEEeccccHHHHHHHhc-------CCceEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----C-----
Confidence            88999999999999886       7899999998654322     3346788999999999999988743    2     


Q ss_pred             CCCCceEEEecccccccc---C--------------CchhHHHHhHHHHHHHHHHHHH-HhcCCCCeEEEEeecCcccCC
Q 028508          104 SSSGGIIINISATLHYTA---T--------------WYQIHVSAAKAAVDSITRSLAL-EWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       104 ~~~~~~iv~iss~~~~~~---~--------------~~~~~y~~sKaa~~~~~~~la~-e~~~~~gi~v~~v~pG~v~t~  165 (208)
                         -.++|++||......   .              .....|+.||+..+.++..... ++.+...++..+|+|..|+.|
T Consensus       108 ---VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp  184 (280)
T PF01073_consen  108 ---VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGP  184 (280)
T ss_pred             ---CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCc
Confidence               356999999986553   1              1334699999998888876553 222123589999999999988


Q ss_pred             CccCCCChHHHHHhhhhh---hc------CCCCCCHHHHHHHHHHh
Q 028508          166 AGVSKLAPEEIRSKATDY---MA------AYKFGEKWDIAMAALYL  202 (208)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~dva~~~~~L  202 (208)
                      ........  ........   ..      ...+...+++|.+.+-.
T Consensus       185 ~d~~~~~~--~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA  228 (280)
T PF01073_consen  185 GDQRLVPR--LVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLA  228 (280)
T ss_pred             ccccccch--hhHHHHhcccceeecCCCceECcEeHHHHHHHHHHH
Confidence            54332211  11111111   11      12356789999987654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.05  E-value=1.1e-09  Score=84.17  Aligned_cols=174  Identities=17%  Similarity=0.100  Sum_probs=111.8

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCe----eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPA----IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~   75 (208)
                      +|++.++-.+..+++..  +.++    ..+.+|+.|.+.+.+++++.     ++|+|+|.|+.-+..... .   .....
T Consensus        30 d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-----~pdiVfHaAA~KhVpl~E-~---~p~ea  100 (293)
T PF02719_consen   30 DRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-----KPDIVFHAAALKHVPLME-D---NPFEA  100 (293)
T ss_dssp             ES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T-SEEEE------HHHHC-C---CHHHH
T ss_pred             CCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-----CCCEEEEChhcCCCChHH-h---CHHHH
Confidence            68888999999998643  2233    34688999999999998754     899999999976643222 2   34667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.|+.++++++..+-            -.++|++|+--+..   +...||++|.-.+.++.+.+.... ..+.++.
T Consensus       101 v~tNv~GT~nv~~aa~~~~------------v~~~v~ISTDKAv~---PtnvmGatKrlaE~l~~~~~~~~~-~~~t~f~  164 (293)
T PF02719_consen  101 VKTNVLGTQNVAEAAIEHG------------VERFVFISTDKAVN---PTNVMGATKRLAEKLVQAANQYSG-NSDTKFS  164 (293)
T ss_dssp             HHHHCHHHHHHHHHHHHTT-------------SEEEEEEECGCSS-----SHHHHHHHHHHHHHHHHCCTSS-SS--EEE
T ss_pred             HHHHHHHHHHHHHHHHHcC------------CCEEEEccccccCC---CCcHHHHHHHHHHHHHHHHhhhCC-CCCcEEE
Confidence            8999999999999998642            24599999976554   457899999999999999988775 6678999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcC--------CCCCCHHHHHHHHHHhc
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMAALYLA  203 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~L~  203 (208)
                      +|+-|-|..   .....-+-+..+...+-|+        +.+++.+|.++.++..+
T Consensus       165 ~VRFGNVlg---S~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~  217 (293)
T PF02719_consen  165 SVRFGNVLG---SRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAA  217 (293)
T ss_dssp             EEEE-EETT---GTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHH
T ss_pred             EEEecceec---CCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHH
Confidence            999998853   2222222333444433332        23467778877776543

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.03  E-value=1.4e-08  Score=80.46  Aligned_cols=156  Identities=17%  Similarity=0.100  Sum_probs=105.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+..+.+|++|.+++.++++       .+|++||+++....      ..+.++..+++|+.++..+++++..    .+  
T Consensus        44 ~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~--  104 (328)
T TIGR03466        44 DVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AG--  104 (328)
T ss_pred             CceEEEeeCCCHHHHHHHHh-------CCCEEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hC--
Confidence            46678999999998877765       68999999975321      1223567888999999999888753    22  


Q ss_pred             CCCCCCCceEEEeccccccccCC---------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          101 QASSSSGGIIINISATLHYTATW---------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~---------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                            -+++|++||...+...+               ....|+.+|.+.+.+++.+..+    +|+++..++|+.+.++
T Consensus       105 ------~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       105 ------VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE----KGLPVVIVNPSTPIGP  174 (328)
T ss_pred             ------CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCccCCC
Confidence                  35799999976543211               1347999999999999887653    3689999999999876


Q ss_pred             CccCCCChHHH-HHhhhhhhc-----CCCCCCHHHHHHHHHHhcCC
Q 028508          166 AGVSKLAPEEI-RSKATDYMA-----AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       166 ~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~dva~~~~~L~s~  205 (208)
                      ........... ........+     ...+...+|++++++.++..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  220 (328)
T TIGR03466       175 RDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALER  220 (328)
T ss_pred             CCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhC
Confidence            53222111111 111111111     11356789999998877643

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.03  E-value=2.1e-08  Score=77.43  Aligned_cols=138  Identities=15%  Similarity=0.093  Sum_probs=110.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhC--------------CccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFG--------------KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g--------------~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      .+.....|..++.++...+.++.+.+.              .+..||...... ..+++..++.+.|.+.++.|+..++.
T Consensus        51 dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~  130 (299)
T PF08643_consen   51 DIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPIL  130 (299)
T ss_pred             CCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHH
Confidence            466677788777777777777776554              345565555433 34788899999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEe-ccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~i-ss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      +++.++|+++.+..      .+.+||++ -|+......|+.+.-.+...++.+|++.|++|+. ++||.|..++.|.++-
T Consensus       131 ~~q~lLPlL~~~~~------~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~i  203 (299)
T PF08643_consen  131 TIQGLLPLLRSRSN------QKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLDI  203 (299)
T ss_pred             HHHHHHHHHHhccC------CCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeecc
Confidence            99999999988320      03445544 5777888899999999999999999999999998 9999999999998875


Q ss_pred             C
Q 028508          165 T  165 (208)
Q Consensus       165 ~  165 (208)
                      .
T Consensus       204 ~  204 (299)
T PF08643_consen  204 G  204 (299)
T ss_pred             c
Confidence            4

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02686 cinnamoyl-CoA reductase

Probab=98.99  E-value=2.9e-08  Score=80.16  Aligned_cols=157  Identities=7%  Similarity=-0.025  Sum_probs=102.3

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|.+++.++++       .+|.+||.++...+.....    ......++|+.++..+++++...   .+  
T Consensus       108 ~~~~v~~Dl~d~~~l~~~i~-------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~--  171 (367)
T PLN02686        108 GIWTVMANLTEPESLHEAFD-------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRT---ES--  171 (367)
T ss_pred             ceEEEEcCCCCHHHHHHHHH-------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhc---CC--
Confidence            47789999999999988776       4789999888654322111    11234567889999988886532   11  


Q ss_pred             CCCCCCCceEEEeccccc-cc--------c--------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508          101 QASSSSGGIIINISATLH-YT--------A--------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~-~~--------~--------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                            -.++|++||..+ ..        +              ..+...|+.+|.+.+.+++.++.+    +|++++.+
T Consensus       172 ------v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~gl~~v~l  241 (367)
T PLN02686        172 ------VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG----KGLKLATI  241 (367)
T ss_pred             ------ccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh----cCceEEEE
Confidence                  236999999631 11        0              012346999999999999887654    47999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhc-----CCCCCCHHHHHHHHHHhcC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMA-----AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~L~s  204 (208)
                      +|+.|++|....... ...........+     ...+...+|++++++.++.
T Consensus       242 Rp~~vyGp~~~~~~~-~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        242 CPALVTGPGFFRRNS-TATIAYLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             cCCceECCCCCCCCC-hhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            999999986432211 111111111111     1136788999999988774

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.97  E-value=5e-08  Score=74.73  Aligned_cols=171  Identities=16%  Similarity=0.081  Sum_probs=111.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeE---EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIG---LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~---~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      .+.+--.++.+.+. .+.++..   -.+|++|++.+.+++.+.     ++|+|||+|++....    .-..+-+..+.+|
T Consensus         8 ~~GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD----~aE~~~e~A~~vN   77 (281)
T COG1091           8 ANGQLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRET-----RPDVVINAAAYTAVD----KAESEPELAFAVN   77 (281)
T ss_pred             CCChHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhh-----CCCEEEECccccccc----cccCCHHHHHHhH
Confidence            33344445555554 2223332   257999999999999986     899999999986642    2334457889999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcC
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~  148 (208)
                      ..++.++.+++...             +..+|++|+-..+-+           ..+...||.+|.+.+..++...     
T Consensus        78 a~~~~~lA~aa~~~-------------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~-----  139 (281)
T COG1091          78 ATGAENLARAAAEV-------------GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG-----  139 (281)
T ss_pred             HHHHHHHHHHHHHh-------------CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC-----
Confidence            99999999998643             567999998765433           2456789999999999888642     


Q ss_pred             CCCeEEEEeecCcccCCCccCCCChHHHHHhhhhh-------hcCCCCCCHHHHHHHHHHhcCCC
Q 028508          149 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-------MAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       149 ~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                         -+...++..++.......+  ...+.....+.       -..+.+...+|+|.++..|+...
T Consensus       140 ---~~~~I~Rtswv~g~~g~nF--v~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~  199 (281)
T COG1091         140 ---PRHLILRTSWVYGEYGNNF--VKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKE  199 (281)
T ss_pred             ---CCEEEEEeeeeecCCCCCH--HHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence               2334455555654322111  11111111111       12344668899999999876543

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.96  E-value=6.7e-08  Score=77.54  Aligned_cols=160  Identities=16%  Similarity=0.081  Sum_probs=100.7

Q ss_pred             CCeeEEEcCCCCHHH-H-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028508           20 IPAIGLEGDVRKRED-A-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (208)
                      .++..+.+|++++.. + ......+.   ..+|+|||+|+.....       ..++...++|+.++..+++.+..    .
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~~---~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~  126 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERLA---ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----G  126 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHHH---hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----C
Confidence            368889999986531 0 11112221   3799999999864321       12456778999999998887653    2


Q ss_pred             CCCCCCCCCCceEEEeccccccccC----------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           98 GRGQASSSSGGIIINISATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        98 ~~~~~~~~~~~~iv~iss~~~~~~~----------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +        ..+++++||.......                .....|+.+|.+.+.+++.++     ..|++++.++||.
T Consensus       127 ~--------~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~g~~~~i~Rpg~  193 (367)
T TIGR01746       127 R--------AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS-----DRGLPVTIVRPGR  193 (367)
T ss_pred             C--------CceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH-----hcCCCEEEECCCc
Confidence            2        2459999998765431                113469999999998887653     3389999999999


Q ss_pred             ccCCCccCCCChHHHHHhhh------hhhcC-----CCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKAT------DYMAA-----YKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~dva~~~~~L~s~~  206 (208)
                      +.++..........+.....      ...|.     ..+...+|+++++++++...
T Consensus       194 v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~  249 (367)
T TIGR01746       194 ILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQP  249 (367)
T ss_pred             eeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCC
Confidence            98763222222111111111      11121     12567899999999987543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02240 UDP-glucose 4-epimerase

Probab=98.95  E-value=5e-08  Score=78.20  Aligned_cols=121  Identities=16%  Similarity=0.031  Sum_probs=88.8

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|++++..+++..     .+|+|||+|+.....    .+.+.+...+++|+.++..+++++.    +.+ 
T Consensus        58 ~~~~~~~~D~~~~~~l~~~~~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-  123 (352)
T PLN02240         58 DNLVFHKVDLRDKEALEKVFAST-----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMA----KHG-  123 (352)
T ss_pred             ccceEEecCcCCHHHHHHHHHhC-----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHH----HcC-
Confidence            45778999999999998887652     799999999965321    2334567889999999999988653    222 


Q ss_pred             CCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                             .+++|++||...+.           +..+...|+.+|.+.+.+++.++.+.   .++++..++++.+..
T Consensus       124 -------~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~R~~~v~G  189 (352)
T PLN02240        124 -------CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD---PEWKIILLRYFNPVG  189 (352)
T ss_pred             -------CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCCEEEEeecCcCC
Confidence                   35799999964332           11245689999999999999887542   257777778765554

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.95  E-value=7e-08  Score=75.76  Aligned_cols=172  Identities=16%  Similarity=0.094  Sum_probs=109.7

Q ss_pred             HHHHHHHhcCCCee----EEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508           10 SAVAALHSLGIPAI----GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus        10 ~~~~~l~~~~~~~~----~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      .+++.|.+.+..++    ...+|+++.+++.++++..     ++|+|||+|+.......   ..+.....+++|+.++..
T Consensus        12 ~l~~~L~~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~~~~~~~~---~~~~~~~~~~~n~~~~~~   83 (306)
T PLN02725         12 AIVRKLEALGFTNLVLRTHKELDLTRQADVEAFFAKE-----KPTYVILAAAKVGGIHA---NMTYPADFIRENLQIQTN   83 (306)
T ss_pred             HHHHHHHhCCCcEEEeeccccCCCCCHHHHHHHHhcc-----CCCEEEEeeeeecccch---hhhCcHHHHHHHhHHHHH
Confidence            45556655554432    3468999999988877652     68999999986431110   111234567789999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc---------------C-CchhHHHHhHHHHHHHHHHHHHHhcCC
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------------T-WYQIHVSAAKAAVDSITRSLALEWGTD  149 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------~-~~~~~y~~sKaa~~~~~~~la~e~~~~  149 (208)
                      +++++...    +        -.++|++||...+.+               . +....|+.+|.+.+.+++.+..+.   
T Consensus        84 ll~~~~~~----~--------~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---  148 (306)
T PLN02725         84 VIDAAYRH----G--------VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY---  148 (306)
T ss_pred             HHHHHHHc----C--------CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh---
Confidence            99888642    2        246999999754321               1 112359999999998888776543   


Q ss_pred             CCeEEEEeecCcccCCCccCC-----CChHHHH---Hhhh----------hhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          150 YAIRVNGIAPGPIKDTAGVSK-----LAPEEIR---SKAT----------DYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       150 ~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~---~~~~----------~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                       ++++..++|+.+..+.....     ..+....   ....          ...+...+...+|+++++++++..
T Consensus       149 -~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~  221 (306)
T PLN02725        149 -GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRR  221 (306)
T ss_pred             -CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhc
Confidence             68999999999998753211     0111110   0001          112233568889999999998764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.93  E-value=8.3e-08  Score=79.16  Aligned_cols=138  Identities=20%  Similarity=0.146  Sum_probs=110.9

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|++-++..+..+++..  ..+..++-+|+.|.+.+..+++..     ++|+|+|.|+.-+... .+..   ....++.|
T Consensus       282 ~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~VfHAAA~KHVPl-~E~n---P~Eai~tN  352 (588)
T COG1086         282 SRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDIVFHAAALKHVPL-VEYN---PEEAIKTN  352 (588)
T ss_pred             cCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCceEEEhhhhccCcc-hhcC---HHHHHHHh
Confidence            68888899999999875  356788999999999999998853     7999999999866533 3333   45668889


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.|+.++++++...-.            .++|++|+--+..   +...||++|...+.+++++..... ..+.++..++-
T Consensus       353 V~GT~nv~~aa~~~~V------------~~~V~iSTDKAV~---PtNvmGaTKr~aE~~~~a~~~~~~-~~~T~f~~VRF  416 (588)
T COG1086         353 VLGTENVAEAAIKNGV------------KKFVLISTDKAVN---PTNVMGATKRLAEKLFQAANRNVS-GTGTRFCVVRF  416 (588)
T ss_pred             hHhHHHHHHHHHHhCC------------CEEEEEecCcccC---CchHhhHHHHHHHHHHHHHhhccC-CCCcEEEEEEe
Confidence            9999999999876533            4599999975554   457799999999999999988776 44789999998


Q ss_pred             CcccC
Q 028508          160 GPIKD  164 (208)
Q Consensus       160 G~v~t  164 (208)
                      |-|..
T Consensus       417 GNVlG  421 (588)
T COG1086         417 GNVLG  421 (588)
T ss_pred             cceec
Confidence            87754

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.93  E-value=2.9e-08  Score=78.48  Aligned_cols=122  Identities=18%  Similarity=0.058  Sum_probs=90.7

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++..+.+|+++.+++..+++.     +++|++||++|......    ..++....+..|+.++..+++++..    .+  
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--  112 (328)
T TIGR01179        48 RVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TG--  112 (328)
T ss_pred             ceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cC--
Confidence            466789999999999888763     47999999999754322    2234456788999999999887542    22  


Q ss_pred             CCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                            ..++|++||...+...           .+...|+.+|++.+.+++.++++.   .++++..++|+.+..+.
T Consensus       113 ------~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       113 ------VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKAD---PGLSYVILRYFNVAGAD  180 (328)
T ss_pred             ------CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhc---cCCCEEEEecCcccCCC
Confidence                  3579999886543211           234679999999999999987652   36899999999888763

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.93  E-value=2.7e-08  Score=75.00  Aligned_cols=161  Identities=19%  Similarity=0.148  Sum_probs=113.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|+.|.+.+.++++..     .+|.|||.|+....    ..+.+.....++.|+.++..+++++...    +  
T Consensus        43 ~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~--  107 (236)
T PF01370_consen   43 NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAAREA----G--  107 (236)
T ss_dssp             TEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHH----T--
T ss_pred             eEEEEEeecccccccccccccc-----CceEEEEeeccccc----cccccccccccccccccccccccccccc----c--
Confidence            5778999999999999999876     79999999986431    1122456777888988888888887643    2  


Q ss_pred             CCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC---
Q 028508          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA---  166 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~---  166 (208)
                            ..++|++||...+...           .+...|+.+|...+.+++.+..+.    ++++..++|+.+..|.   
T Consensus       108 ------~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~  177 (236)
T PF01370_consen  108 ------VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY----GLRVTILRPPNVYGPGNPN  177 (236)
T ss_dssp             ------TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH----TSEEEEEEESEEESTTSSS
T ss_pred             ------ccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccc
Confidence                  2469999997544322           245569999999999999887654    5999999999999887   


Q ss_pred             ccCCCChHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCCC
Q 028508          167 GVSKLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .........+........+         ...+...+|+++++++++...
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  226 (236)
T PF01370_consen  178 NNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENP  226 (236)
T ss_dssp             SSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHS
T ss_pred             cccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCC
Confidence            1111112223322222211         122457899999999987654

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.92  E-value=6.5e-08  Score=77.55  Aligned_cols=157  Identities=14%  Similarity=0.045  Sum_probs=105.2

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|+.|.+.+..+++       .+|+|||.|+......    ..++....+++|+.|+..+++++..    .+  
T Consensus        70 ~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~--  132 (348)
T PRK15181         70 RFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AH--  132 (348)
T ss_pred             ceEEEEccCCCHHHHHHHhh-------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            56788999999888777664       5899999999644211    1222345688999999999988753    22  


Q ss_pred             CCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            -.++|++||...+...           .+...|+.+|.+.+.+++.++.+    +|+++..++|+.+..|....
T Consensus       133 ------~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~  202 (348)
T PRK15181        133 ------VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS----YEFNAIGLRYFNVFGRRQNP  202 (348)
T ss_pred             ------CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH----hCCCEEEEEecceeCcCCCC
Confidence                  2469999987544211           23457999999999998887553    36999999999999875422


Q ss_pred             C--C--ChHHHHHhhhhh--hc-------CCCCCCHHHHHHHHHHhcC
Q 028508          170 K--L--APEEIRSKATDY--MA-------AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       170 ~--~--~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~L~s  204 (208)
                      .  .  .-..+.......  +.       .+.+...+|++++++.++.
T Consensus       203 ~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~  250 (348)
T PRK15181        203 NGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT  250 (348)
T ss_pred             CCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence            1  0  111222221111  11       1234678999999887653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.90  E-value=6.4e-08  Score=77.11  Aligned_cols=122  Identities=14%  Similarity=0.027  Sum_probs=87.8

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++..+++.     .++|+|||+|+......    ..+.....+++|+.++..+++++.    +.+ 
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-  115 (338)
T PRK10675         50 KHPTFVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AAN-  115 (338)
T ss_pred             CCceEEEccCCCHHHHHHHHhc-----CCCCEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcC-
Confidence            3567789999999998887763     37999999998754321    123345678899999999887654    322 


Q ss_pred             CCCCCCCCceEEEeccccccccC------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          100 GQASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                             -++||++||...+...            .+...|+.+|.+.+.+++.++++..   ++++..++++.+..+
T Consensus       116 -------~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~ilR~~~v~g~  183 (338)
T PRK10675        116 -------VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGA  183 (338)
T ss_pred             -------CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecCC
Confidence                   3579999997543211            2367899999999999999876542   577778887666554

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.89  E-value=1.3e-07  Score=74.41  Aligned_cols=157  Identities=15%  Similarity=0.072  Sum_probs=99.8

Q ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        25 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +..|+.+.+.++.+.+.   .++++|+|||+|+....      ..++.+..+++|+.++..+++++...           
T Consensus        46 ~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~-----------  105 (314)
T TIGR02197        46 IADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAEK-----------  105 (314)
T ss_pred             eeccCcchhHHHHHHhh---ccCCCCEEEECccccCc------cccchHHHHHHHHHHHHHHHHHHHHh-----------
Confidence            45677766665554432   24589999999996431      22345678899999999999887542           


Q ss_pred             CCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC--C
Q 028508          105 SSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--L  171 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~  171 (208)
                        +.++|++||...+..           ..+...|+.+|.+.+.+++....+.  ..++++..++|+.+..+.....  .
T Consensus       106 --~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~lR~~~vyG~~~~~~~~~  181 (314)
T TIGR02197       106 --GIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE--ALSAQVVGLRYFNVYGPREYHKGKM  181 (314)
T ss_pred             --CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh--ccCCceEEEEEeeccCCCCCCCCCc
Confidence              236999999754321           1245679999999999988643222  2257889999999987753211  1


Q ss_pred             C--hHHHHHhhhhh--hc-------------CCCCCCHHHHHHHHHHhcCC
Q 028508          172 A--PEEIRSKATDY--MA-------------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       172 ~--~~~~~~~~~~~--~~-------------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .  -..+.......  +.             .+.+...+|++++++.++..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~  232 (314)
T TIGR02197       182 ASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN  232 (314)
T ss_pred             ccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence            0  11111111111  10             12357789999999988764

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02427 UDP-apiose/xylose synthase

Probab=98.88  E-value=2.3e-08  Score=81.21  Aligned_cols=157  Identities=11%  Similarity=0.026  Sum_probs=102.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+.+.++++       .+|+|||+|+...+..... .+   ...+..|+.++..+++++...       
T Consensus        66 ~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~~~~~~~-~~---~~~~~~n~~gt~~ll~aa~~~-------  127 (386)
T PLN02427         66 RIQFHRINIKHDSRLEGLIK-------MADLTINLAAICTPADYNT-RP---LDTIYSNFIDALPVVKYCSEN-------  127 (386)
T ss_pred             CeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccChhhhhh-Ch---HHHHHHHHHHHHHHHHHHHhc-------
Confidence            57889999999988877664       4899999999754322111 11   234567999999888876421       


Q ss_pred             CCCCCCCceEEEeccccccccC---------------------------------CchhHHHHhHHHHHHHHHHHHHHhc
Q 028508          101 QASSSSGGIIINISATLHYTAT---------------------------------WYQIHVSAAKAAVDSITRSLALEWG  147 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~---------------------------------~~~~~y~~sKaa~~~~~~~la~e~~  147 (208)
                            +.++|++||...+...                                 .....|+.+|.+.+.+++.++.   
T Consensus       128 ------~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---  198 (386)
T PLN02427        128 ------NKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA---  198 (386)
T ss_pred             ------CCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh---
Confidence                  2469999997533210                                 0123699999999988877653   


Q ss_pred             CCCCeEEEEeecCcccCCCccCCC---C-----hH---HHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCC
Q 028508          148 TDYAIRVNGIAPGPIKDTAGVSKL---A-----PE---EIRSKATDYMA---------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       148 ~~~gi~v~~v~pG~v~t~~~~~~~---~-----~~---~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~  205 (208)
                       .+|+++..++|+.|..|......   .     +.   .+........+         .+.+...+|++++++.++..
T Consensus       199 -~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~  275 (386)
T PLN02427        199 -ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN  275 (386)
T ss_pred             -hcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC
Confidence             34799999999999987532100   0     00   01111111111         12367899999999988754

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.87  E-value=5e-07  Score=71.14  Aligned_cols=156  Identities=13%  Similarity=0.087  Sum_probs=97.5

Q ss_pred             cCCCCHHHHHHHHHHHHH--HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           27 GDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        27 ~D~~~~~~~~~~~~~~~~--~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +|++|..+...+++.+.+  .++++|+|||+|+.....   +...   +..++.|+.++..+++++..    .       
T Consensus        45 ~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~---~~~~---~~~~~~n~~~t~~ll~~~~~----~-------  107 (308)
T PRK11150         45 LDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYCLE----R-------  107 (308)
T ss_pred             hhhhhhhhHHHHHHHHhcccccCCccEEEECceecCCc---CCCh---HHHHHHHHHHHHHHHHHHHH----c-------
Confidence            455555444444444432  235799999999864432   1122   34689999999999988753    2       


Q ss_pred             CCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC--C
Q 028508          105 SSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--L  171 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~  171 (208)
                        +.++|++||...+..           ..+...|+.+|.+.+.+++.++.+    +++++..++|+.+..|.....  .
T Consensus       108 --~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~vyG~~~~~~~~~  181 (308)
T PRK11150        108 --EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE----ANSQICGFRYFNVYGPREGHKGSM  181 (308)
T ss_pred             --CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH----cCCCEEEEeeeeecCCCCCCCCcc
Confidence              235999999754321           123467999999999888877543    368999999999988753221  1


Q ss_pred             C--hHHHHHhhhhh-h---c------CCCCCCHHHHHHHHHHhcCC
Q 028508          172 A--PEEIRSKATDY-M---A------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       172 ~--~~~~~~~~~~~-~---~------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .  ...+....... .   .      .+.+...+|++++++.++..
T Consensus       182 ~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~  227 (308)
T PRK11150        182 ASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN  227 (308)
T ss_pred             chhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence            1  01111112111 1   1      12356889999998887653

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.82  E-value=5.7e-07  Score=70.00  Aligned_cols=166  Identities=16%  Similarity=0.091  Sum_probs=107.3

Q ss_pred             HHHHHHHHhcCCCeeEE---EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      ..+++.|.+.|.++..+   .+|+.+.+++..+++..     .+|+|||+++......    ........+++|+.++..
T Consensus        13 ~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~   83 (287)
T TIGR01214        13 RELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAI-----RPDAVVNTAAYTDVDG----AESDPEKAFAVNALAPQN   83 (287)
T ss_pred             HHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhC-----CCCEEEECCccccccc----cccCHHHHHHHHHHHHHH
Confidence            45667776666555432   46999999988887642     6899999998653211    122345678899999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                      +++++..    .         +.++|++||...+.+           ..+...|+.+|.+.+.+++.+        +.++
T Consensus        84 l~~~~~~----~---------~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~--------~~~~  142 (287)
T TIGR01214        84 LARAAAR----H---------GARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA--------GPNA  142 (287)
T ss_pred             HHHHHHH----c---------CCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh--------CCCe
Confidence            9988653    2         246999998653321           123567999999988877754        3468


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ..++|+.+..+...... ............+       ...+...+|++++++.++..
T Consensus       143 ~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  199 (287)
T TIGR01214       143 LIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR  199 (287)
T ss_pred             EEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence            89999999877521111 1111111111111       12345679999999988754

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.79  E-value=1.6e-07  Score=81.64  Aligned_cols=162  Identities=13%  Similarity=0.028  Sum_probs=106.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+.+..++..     .++|+|||+|+.....    ....+....+++|+.++..+++++...   .. 
T Consensus        57 ~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~-  123 (668)
T PLN02260         57 PNFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQ-  123 (668)
T ss_pred             CCeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhc---CC-
Confidence            3577889999999887765432     3799999999975431    112223466789999999998886432   11 


Q ss_pred             CCCCCCCCceEEEecccccccc--------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          100 GQASSSSGGIIINISATLHYTA--------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~--------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                             -.++|++||...+..              ..+...|+.+|.+.+.+++.+..++    ++++..++|+.|+.|
T Consensus       124 -------vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~----~l~~vilR~~~VyGp  192 (668)
T PLN02260        124 -------IRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGP  192 (668)
T ss_pred             -------CcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECcccccCc
Confidence                   247999999753321              1134579999999999998876543    588999999999987


Q ss_pred             CccCCCChHHHHHhhhhh--hc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          166 AGVSKLAPEEIRSKATDY--MA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .......-..+.......  ++       ...+...+|++++++.++..
T Consensus       193 ~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~  241 (668)
T PLN02260        193 NQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK  241 (668)
T ss_pred             CCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc
Confidence            543211111111111111  11       12356789999999887743

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.71  E-value=9.4e-07  Score=70.80  Aligned_cols=157  Identities=16%  Similarity=0.080  Sum_probs=101.9

Q ss_pred             CeeEEEcCCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           21 PAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        21 ~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .+.++.+|++ +.+.+..+++       ++|+|||.|+...+...    .++.+..+++|+.++..++.++...      
T Consensus        47 ~~~~~~~Dl~~~~~~~~~~~~-------~~d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~~~------  109 (347)
T PRK11908         47 RMHFFEGDITINKEWIEYHVK-------KCDVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAVKY------  109 (347)
T ss_pred             CeEEEeCCCCCCHHHHHHHHc-------CCCEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHHhc------
Confidence            4778899998 6665555433       69999999997543221    1223466788999999988877532      


Q ss_pred             CCCCCCCCceEEEeccccccccC------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508          100 GQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                             +.++|++||...+...                  .+...|+.+|.+.+.+++.++.+    +|+.+..++|+.
T Consensus       110 -------~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~  178 (347)
T PRK11908        110 -------GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME----EGLNFTLFRPFN  178 (347)
T ss_pred             -------CCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH----cCCCeEEEeeee
Confidence                   2359999997533210                  12236999999999988887653    368889999999


Q ss_pred             ccCCCccCCC----C----hHHHHHhhhhh---------hcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKL----A----PEEIRSKATDY---------MAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~----~----~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +..|......    .    -..+.......         ...+.+...+|++++++.++..
T Consensus       179 v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~  239 (347)
T PRK11908        179 WIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN  239 (347)
T ss_pred             eeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence            8877532211    0    01111111111         1223468899999999988764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.68  E-value=2e-07  Score=72.75  Aligned_cols=165  Identities=15%  Similarity=0.052  Sum_probs=99.6

Q ss_pred             HHHHHHHHHhcCCCeeEE---EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            8 LRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         8 ~~~~~~~l~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      -..+.+.+...+-.+..+   .+|++|.+++.+++++.     ++|+|||+|++..+.    .-.++-+..+.+|+.++.
T Consensus        13 G~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~   83 (286)
T PF04321_consen   13 GSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNVD----ACEKNPEEAYAINVDATK   83 (286)
T ss_dssp             HHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH-------SEEEE------HH----HHHHSHHHHHHHHTHHHH
T ss_pred             HHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHh-----CCCeEeccceeecHH----hhhhChhhhHHHhhHHHH
Confidence            345666666555445555   78999999999998876     799999999874321    122345678899999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      .+.+.+..    .         +.++|++||...+.+.           .+...||.+|...+..++..    . +   +
T Consensus        84 ~la~~~~~----~---------~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~----~-~---~  142 (286)
T PF04321_consen   84 NLAEACKE----R---------GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA----C-P---N  142 (286)
T ss_dssp             HHHHHHHH----C---------T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH------S---S
T ss_pred             HHHHHHHH----c---------CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh----c-C---C
Confidence            99988763    2         4679999998655332           23567999999988888762    2 2   4


Q ss_pred             EEEeecCcccCCCccCCCChHHHHHhhhhhhc-------CCCCCCHHHHHHHHHHhcC
Q 028508          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~L~s  204 (208)
                      ...++++++..+.  ....-..+........+       ...+...+|+|+.+..|+.
T Consensus       143 ~~IlR~~~~~g~~--~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~  198 (286)
T PF04321_consen  143 ALILRTSWVYGPS--GRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIE  198 (286)
T ss_dssp             EEEEEE-SEESSS--SSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHH
T ss_pred             EEEEecceecccC--CCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHH
Confidence            6678888888661  11111222222222211       1234577899999998864

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.67  E-value=1.4e-06  Score=70.45  Aligned_cols=157  Identities=18%  Similarity=0.082  Sum_probs=101.2

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (208)
                      .++.+|+++.+.+..++.       ++|+|||.|+..........   .....+..|+.++..+++++..    .+    
T Consensus        67 ~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~~~~~~~---~~~~~~~~N~~~t~nll~aa~~----~~----  128 (370)
T PLN02695         67 EFHLVDLRVMENCLKVTK-------GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAARI----NG----  128 (370)
T ss_pred             eEEECCCCCHHHHHHHHh-------CCCEEEEcccccCCcccccc---CchhhHHHHHHHHHHHHHHHHH----hC----
Confidence            456789998877666543       68999999986542222111   1234466799999999888653    22    


Q ss_pred             CCCCCceEEEeccccccc-----------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          103 SSSSGGIIINISATLHYT-----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       103 ~~~~~~~iv~iss~~~~~-----------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                          -.++|++||...+.                 +..+...|+.+|.+.+.+++..+..    .|+++..++|+.+..|
T Consensus       129 ----vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~vyGp  200 (370)
T PLN02695        129 ----VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD----FGIECRIGRFHNIYGP  200 (370)
T ss_pred             ----CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCEEEEEECCccCC
Confidence                34699999974221                 2234568999999999999887654    3689999999999987


Q ss_pred             CccCC----CChHHHHHhhh---hhhc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          166 AGVSK----LAPEEIRSKAT---DYMA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       166 ~~~~~----~~~~~~~~~~~---~~~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .....    .....+.....   ..++       ...+...+|+++++++++..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~  254 (370)
T PLN02695        201 FGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKS  254 (370)
T ss_pred             CCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence            43211    11222222211   1111       12357889999999987654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.65  E-value=2.2e-06  Score=67.41  Aligned_cols=158  Identities=15%  Similarity=0.070  Sum_probs=102.0

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCc-cEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKL-DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      ..+.+|+++.+.+....+       .. |.+||+|+.........  . .....+.+|+.++..+++++..    .+   
T Consensus        45 ~~~~~d~~~~~~~~~~~~-------~~~d~vih~aa~~~~~~~~~--~-~~~~~~~~nv~gt~~ll~aa~~----~~---  107 (314)
T COG0451          45 EFVVLDLTDRDLVDELAK-------GVPDAVIHLAAQSSVPDSNA--S-DPAEFLDVNVDGTLNLLEAARA----AG---  107 (314)
T ss_pred             ceeeecccchHHHHHHHh-------cCCCEEEEccccCchhhhhh--h-CHHHHHHHHHHHHHHHHHHHHH----cC---
Confidence            456778888744444433       33 99999999765322111  1 3456788999999999999875    22   


Q ss_pred             CCCCCCceEEEeccccccccC-----------C--chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          102 ASSSSGGIIINISATLHYTAT-----------W--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~-----------~--~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                           ..++|+.||.....+.           +  +...|+.+|.+.+.+++....+    .|+.+..++|+.+..|...
T Consensus       108 -----~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~----~~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         108 -----VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL----YGLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             -----CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCeEEEeeeeeeCCCCC
Confidence                 3568887775533321           1  1124999999999999988772    3689999999999887655


Q ss_pred             CCCC---hHHHHHhhhhhhc---C-------CCCCCHHHHHHHHHHhcCCC
Q 028508          169 SKLA---PEEIRSKATDYMA---A-------YKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       169 ~~~~---~~~~~~~~~~~~~---~-------~~~~~~~dva~~~~~L~s~~  206 (208)
                      ....   ...+........+   .       +.+...+|+++++++++...
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  229 (314)
T COG0451         179 PDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP  229 (314)
T ss_pred             CCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCC
Confidence            4421   1111111222222   1       12456899999999988753

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.56  E-value=3.4e-06  Score=66.24  Aligned_cols=126  Identities=18%  Similarity=0.131  Sum_probs=84.9

Q ss_pred             HHHHHHHhcCCCeeEE-------EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508           10 SAVAALHSLGIPAIGL-------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus        10 ~~~~~l~~~~~~~~~~-------~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      .+.+.|.+.| +++.+       .+|++|.+.+.++++..     ++|+|||+|+......    ..++-+..+.+|+.+
T Consensus        15 ~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~   84 (299)
T PRK09987         15 ELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAVDK----AESEPEFAQLLNATS   84 (299)
T ss_pred             HHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCcch----hhcCHHHHHHHHHHH
Confidence            4555565555 44322       46999999988887742     6899999999755321    122235567889999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                      +..+++++...             +.++|++||...+.           +..+...|+.+|.+.+.+++..    . .  
T Consensus        85 ~~~l~~aa~~~-------------g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~----~-~--  144 (299)
T PRK09987         85 VEAIAKAANEV-------------GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH----C-A--  144 (299)
T ss_pred             HHHHHHHHHHc-------------CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh----C-C--
Confidence            99999887542             24599999864331           1124457999999998887653    2 2  


Q ss_pred             eEEEEeecCcccCCC
Q 028508          152 IRVNGIAPGPIKDTA  166 (208)
Q Consensus       152 i~v~~v~pG~v~t~~  166 (208)
                       +...++|++++.|.
T Consensus       145 -~~~ilR~~~vyGp~  158 (299)
T PRK09987        145 -KHLIFRTSWVYAGK  158 (299)
T ss_pred             -CEEEEecceecCCC
Confidence             24678888887663

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.55  E-value=1.7e-06  Score=62.82  Aligned_cols=145  Identities=14%  Similarity=0.088  Sum_probs=92.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      .|+++++++        ..++..+++|+.|++++.+.+.       +.|++|+++|....         +          
T Consensus        29 ~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~~---------~----------   74 (183)
T PF13460_consen   29 VRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGPPPK---------D----------   74 (183)
T ss_dssp             ESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHSTTT---------H----------
T ss_pred             ecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhhhhhhhhcc---------c----------
Confidence            466666655        4578999999999988877765       79999999974332         1          


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc---------hhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---------QIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---------~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                        ...++.++..+.+.+        -.++|++|+.......+.         ...|...|...+.+.+        ..++
T Consensus        75 --~~~~~~~~~a~~~~~--------~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------~~~~  136 (183)
T PF13460_consen   75 --VDAAKNIIEAAKKAG--------VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALR--------ESGL  136 (183)
T ss_dssp             --HHHHHHHHHHHHHTT--------SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHH--------HSTS
T ss_pred             --ccccccccccccccc--------cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHH--------hcCC
Confidence              334445555555554        467999999876654333         2345555554443332        3479


Q ss_pred             EEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      +...++||++.++.....    .+...  .......+.+.+|+|++++.++.
T Consensus       137 ~~~ivrp~~~~~~~~~~~----~~~~~--~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  137 NWTIVRPGWIYGNPSRSY----RLIKE--GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             EEEEEEESEEEBTTSSSE----EEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             CEEEEECcEeEeCCCcce----eEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence            999999999987752211    00000  11111246788999999998764

...

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.54  E-value=1e-06  Score=76.42  Aligned_cols=157  Identities=15%  Similarity=0.072  Sum_probs=101.6

Q ss_pred             CeeEEEcCCCCHHH-HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           21 PAIGLEGDVRKRED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        21 ~~~~~~~D~~~~~~-~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ++.++.+|++|.++ ++++++       ++|+|||.|+...+....    +..+..+++|+.++..+++++...      
T Consensus       361 ~~~~~~gDl~d~~~~l~~~l~-------~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~------  423 (660)
T PRK08125        361 RFHFVEGDISIHSEWIEYHIK-------KCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY------  423 (660)
T ss_pred             ceEEEeccccCcHHHHHHHhc-------CCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc------
Confidence            46778899998665 333332       699999999976542211    123456789999999999887642      


Q ss_pred             CCCCCCCCceEEEeccccccccC------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508          100 GQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                             +.++|++||...+...                  .+...|+.+|.+.+.+++.++.+    +|+++..++|+.
T Consensus       424 -------~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~  492 (660)
T PRK08125        424 -------NKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK----EGLRFTLFRPFN  492 (660)
T ss_pred             -------CCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh----cCCceEEEEEce
Confidence                   2359999996433210                  12246999999999999887654    368999999999


Q ss_pred             ccCCCccCC----CCh----HHHHHhhhhh---------hcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSK----LAP----EEIRSKATDY---------MAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~----~~~----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++.|.....    ...    ..+.......         ...+.+...+|++++++.++..
T Consensus       493 vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~  553 (660)
T PRK08125        493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN  553 (660)
T ss_pred             eeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence            998753210    000    1111111111         1122367889999999887753

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.50  E-value=1.9e-06  Score=66.06  Aligned_cols=110  Identities=22%  Similarity=0.076  Sum_probs=82.0

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      ..++++|+.|.+-+.+++++-     ++|.|||.||....+    .+.++-.+.++.|+.|++.|++++...-.      
T Consensus        46 ~~f~~gDi~D~~~L~~vf~~~-----~idaViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv------  110 (329)
T COG1087          46 FKFYEGDLLDRALLTAVFEEN-----KIDAVVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAMLQTGV------  110 (329)
T ss_pred             CceEEeccccHHHHHHHHHhc-----CCCEEEECccccccc----hhhhCHHHHHhhchHhHHHHHHHHHHhCC------
Confidence            468899999999999999874     899999999975542    35566778899999999999988764421      


Q ss_pred             CCCCCCceEEEeccccccccC------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508          102 ASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                            ..||| ||+++..+.            .+...|+.||...+.+.+.++...    +.++..+
T Consensus       111 ------~~~vF-SStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~----~~~~v~L  167 (329)
T COG1087         111 ------KKFIF-SSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN----PFKVVIL  167 (329)
T ss_pred             ------CEEEE-ecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC----CCcEEEE
Confidence                  23555 555544432            345569999999999999888754    3555555

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.48  E-value=3.3e-06  Score=68.80  Aligned_cols=112  Identities=17%  Similarity=0.060  Sum_probs=78.8

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++..+++...   +++|+||||++.....     ..    ..+++|+.++..+++++.    +.+ 
T Consensus       111 ~~v~~v~~Dl~d~~~l~~~~~~~~---~~~D~Vi~~aa~~~~~-----~~----~~~~vn~~~~~~ll~aa~----~~g-  173 (390)
T PLN02657        111 PGAEVVFGDVTDADSLRKVLFSEG---DPVDVVVSCLASRTGG-----VK----DSWKIDYQATKNSLDAGR----EVG-  173 (390)
T ss_pred             CCceEEEeeCCCHHHHHHHHHHhC---CCCcEEEECCccCCCC-----Cc----cchhhHHHHHHHHHHHHH----HcC-
Confidence            357889999999999998887531   2799999999853211     11    224567778777777654    333 


Q ss_pred             CCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                             -++||++||.....   +...|..+|...+...+.     . ..|++...++|+.+..
T Consensus       174 -------v~r~V~iSS~~v~~---p~~~~~~sK~~~E~~l~~-----~-~~gl~~tIlRp~~~~~  222 (390)
T PLN02657        174 -------AKHFVLLSAICVQK---PLLEFQRAKLKFEAELQA-----L-DSDFTYSIVRPTAFFK  222 (390)
T ss_pred             -------CCEEEEEeeccccC---cchHHHHHHHHHHHHHHh-----c-cCCCCEEEEccHHHhc
Confidence                   36799999986543   344578888888776653     2 4589999999988764

>PLN02778 3,5-epimerase/4-reductase

Probab=98.45  E-value=1.4e-05  Score=62.79  Aligned_cols=116  Identities=16%  Similarity=0.127  Sum_probs=76.6

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      ..+++.|.+.|.++.....|+.+.+.+...++..     ++|+|||+||....... +...+.-...+++|+.++..+++
T Consensus        23 ~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~-----~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~   96 (298)
T PLN02778         23 GLLGKLCQEQGIDFHYGSGRLENRASLEADIDAV-----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLAD   96 (298)
T ss_pred             HHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhc-----CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHH
Confidence            3456677777777766778888888777666542     69999999997643211 11223346788899999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccc------------------cCCchhHHHHhHHHHHHHHHHHH
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYT------------------ATWYQIHVSAAKAAVDSITRSLA  143 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------------~~~~~~~y~~sKaa~~~~~~~la  143 (208)
                      ++...    +         -+++++||...+.                  +.+....|+.+|.+.+.+++..+
T Consensus        97 aa~~~----g---------v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778         97 VCRER----G---------LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             HHHHh----C---------CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            98643    1         2245555432110                  11223579999999999988754

>PLN02996 fatty acyl-CoA reductase

Probab=98.40  E-value=1.1e-05  Score=67.68  Aligned_cols=154  Identities=13%  Similarity=0.086  Sum_probs=97.9

Q ss_pred             CCeeEEEcCCCCH-------HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           20 IPAIGLEGDVRKR-------EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK   92 (208)
Q Consensus        20 ~~~~~~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   92 (208)
                      .++.++.+|++++       +.++.+++       .+|+|||+|+....   .    +..+..+++|+.|+..+++++..
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~  149 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKK  149 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHh
Confidence            4688999999843       33444433       69999999986542   1    23567889999999999988753


Q ss_pred             HHHhcCCCCCCCCCCceEEEeccccccccC---------C----------------------------------------
Q 028508           93 YLKKGGRGQASSSSGGIIINISATLHYTAT---------W----------------------------------------  123 (208)
Q Consensus        93 ~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---------~----------------------------------------  123 (208)
                      .   .+        -.++|++||...+...         +                                        
T Consensus       150 ~---~~--------~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (491)
T PLN02996        150 C---VK--------VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQA  218 (491)
T ss_pred             c---CC--------CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence            2   11        2458898887543210         0                                        


Q ss_pred             -------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCCh-------HHHHHhhhhh
Q 028508          124 -------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDY  183 (208)
Q Consensus       124 -------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~  183 (208)
                                   ....|+.+|+..+.+++..    . . |+.+..++|+.|..+.......+       ..+.......
T Consensus       219 ~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~----~-~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g  292 (491)
T PLN02996        219 MKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF----K-E-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKG  292 (491)
T ss_pred             hhhhchhHHHhCCCCCchHhhHHHHHHHHHHh----c-C-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccc
Confidence                         1134999999998888653    2 2 79999999999987653322111       1111111111


Q ss_pred             hc---------CCCCCCHHHHHHHHHHhcC
Q 028508          184 MA---------AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       184 ~~---------~~~~~~~~dva~~~~~L~s  204 (208)
                      ..         ..-+...++++++++.++.
T Consensus       293 ~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~  322 (491)
T PLN02996        293 KLTCFLADPNSVLDVIPADMVVNAMIVAMA  322 (491)
T ss_pred             eEeEEecCCCeecceecccHHHHHHHHHHH
Confidence            11         2334677899999887764

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.39  E-value=2e-06  Score=65.31  Aligned_cols=161  Identities=13%  Similarity=0.046  Sum_probs=110.9

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .+..++..|+.+...+..++..     .++|.|+|-|.........   . +-...++.|++++..|++.......    
T Consensus        57 p~ykfv~~di~~~~~~~~~~~~-----~~id~vihfaa~t~vd~s~---~-~~~~~~~nnil~t~~Lle~~~~sg~----  123 (331)
T KOG0747|consen   57 PNYKFVEGDIADADLVLYLFET-----EEIDTVIHFAAQTHVDRSF---G-DSFEFTKNNILSTHVLLEAVRVSGN----  123 (331)
T ss_pred             CCceEeeccccchHHHHhhhcc-----CchhhhhhhHhhhhhhhhc---C-chHHHhcCCchhhhhHHHHHHhccC----
Confidence            4788999999999998887764     4899999999865432111   1 1233467899999999988865532    


Q ss_pred             CCCCCCCCceEEEecccccccc------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          100 GQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                             -.++|.+|+...+..            ..+...|+++|+|.+++.+++.+.+    |+.|..++.+-|+.|..
T Consensus       124 -------i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy----~lpvv~~R~nnVYGP~q  192 (331)
T KOG0747|consen  124 -------IRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY----GLPVVTTRMNNVYGPNQ  192 (331)
T ss_pred             -------eeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc----CCcEEEEeccCccCCCc
Confidence                   345999998764431            2345569999999999999998755    69999999999999876


Q ss_pred             cCCCChHHHHHhhh---------hhhcCCCCCCHHHHHHHHHHhcC
Q 028508          168 VSKLAPEEIRSKAT---------DYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       168 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      .....-..+.....         .....+.++..+|+++++...+-
T Consensus       193 ~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~  238 (331)
T KOG0747|consen  193 YPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLE  238 (331)
T ss_pred             ChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHh
Confidence            55422111212111         11223446678888888766543

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.37  E-value=1.8e-05  Score=65.47  Aligned_cols=136  Identities=14%  Similarity=0.035  Sum_probs=88.0

Q ss_pred             CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc------
Q 028508           48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------  121 (208)
Q Consensus        48 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------  121 (208)
                      .+|+|||.|+...+... .   ++....+++|+.++..+++++...             +.++|++||...+..      
T Consensus       183 ~~D~ViHlAa~~~~~~~-~---~~p~~~~~~Nv~gt~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~  245 (442)
T PLN02206        183 EVDQIYHLACPASPVHY-K---FNPVKTIKTNVVGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLQHPQ  245 (442)
T ss_pred             CCCEEEEeeeecchhhh-h---cCHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECChHHhCCCCCCCC
Confidence            58999999986543211 1   123567899999999999887532             236999999864421      


Q ss_pred             ----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC--CChHHHHHhhhhh--hc--
Q 028508          122 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDY--MA--  185 (208)
Q Consensus       122 ----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~--~~--  185 (208)
                                ......|+.+|.+.+.+++.+.++    +|+++..++|+.++.|.....  ..-..+.......  +.  
T Consensus       246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~----~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~  321 (442)
T PLN02206        246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY  321 (442)
T ss_pred             CccccccCCCCCccchHHHHHHHHHHHHHHHHHH----hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEe
Confidence                      112457999999999888876554    368899999998887643211  1111121222111  11  


Q ss_pred             -----CCCCCCHHHHHHHHHHhcC
Q 028508          186 -----AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       186 -----~~~~~~~~dva~~~~~L~s  204 (208)
                           .+.+...+|++++++.++.
T Consensus       322 g~G~~~rdfi~V~Dva~ai~~a~e  345 (442)
T PLN02206        322 GDGKQTRSFQFVSDLVEGLMRLME  345 (442)
T ss_pred             CCCCEEEeEEeHHHHHHHHHHHHh
Confidence                 1125678999999988764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.31  E-value=5.9e-06  Score=63.18  Aligned_cols=120  Identities=16%  Similarity=0.122  Sum_probs=69.8

Q ss_pred             CCCeeEEEcCCCCHHH-H-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028508           19 GIPAIGLEGDVRKRED-A-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~-~-~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (208)
                      ..+++++.+|++++.- + ...++++.+   .+|+|||+|+......       .+....++|+.|+..+++.+..    
T Consensus        59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~----  124 (249)
T PF07993_consen   59 LSRIEVVEGDLSQPNLGLSDEDYQELAE---EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQ----  124 (249)
T ss_dssp             TTTEEEEE--TTSGGGG--HHHHHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----
T ss_pred             hccEEEEeccccccccCCChHHhhcccc---ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHh----
Confidence            4689999999998641 1 122233332   6999999999654311       2344677899999999988762    


Q ss_pred             cCCCCCCCCCCceEEEecccccc--cc------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           97 GGRGQASSSSGGIIINISATLHY--TA------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        97 ~~~~~~~~~~~~~iv~iss~~~~--~~------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      .+        ..+++++||....  ..                  ......|..||+..+.+++..+.+.    |+.+..
T Consensus       125 ~~--------~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~----g~p~~I  192 (249)
T PF07993_consen  125 GK--------RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH----GLPVTI  192 (249)
T ss_dssp             SS-----------EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-------EEE
T ss_pred             cc--------CcceEEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC----CceEEE
Confidence            11        2369999993211  11                  1233469999999999999887653    588999


Q ss_pred             eecCcccC
Q 028508          157 IAPGPIKD  164 (208)
Q Consensus       157 v~pG~v~t  164 (208)
                      ++||.|..
T Consensus       193 ~Rp~~i~g  200 (249)
T PF07993_consen  193 YRPGIIVG  200 (249)
T ss_dssp             EEE-EEE-
T ss_pred             EecCcccc
Confidence            99999976

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.26  E-value=1.8e-05  Score=62.72  Aligned_cols=117  Identities=15%  Similarity=0.127  Sum_probs=82.1

Q ss_pred             CCCeeEEEcCCCC------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVRK------REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK   92 (208)
Q Consensus        19 ~~~~~~~~~D~~~------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   92 (208)
                      ..++..+.+|++.      ....+.+.+       .+|.||||++...-    -.+   ..+....|+.|+..+++.+.-
T Consensus        59 ~~ri~vv~gDl~e~~lGL~~~~~~~La~-------~vD~I~H~gA~Vn~----v~p---Ys~L~~~NVlGT~evlrLa~~  124 (382)
T COG3320          59 ADRVEVVAGDLAEPDLGLSERTWQELAE-------NVDLIIHNAALVNH----VFP---YSELRGANVLGTAEVLRLAAT  124 (382)
T ss_pred             cceEEEEecccccccCCCCHHHHHHHhh-------hcceEEecchhhcc----cCc---HHHhcCcchHhHHHHHHHHhc
Confidence            5678999999993      333344333       69999999985431    112   345566899999999998753


Q ss_pred             HHHhcCCCCCCCCCCc-eEEEecccccccc--------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508           93 YLKKGGRGQASSSSGG-IIINISATLHYTA--------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus        93 ~~~~~~~~~~~~~~~~-~iv~iss~~~~~~--------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                           +        ++ .+.+|||++....                    ....+.|+-||++.+.+++...     +.|
T Consensus       125 -----g--------k~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-----~rG  186 (382)
T COG3320         125 -----G--------KPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-----DRG  186 (382)
T ss_pred             -----C--------CCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-----hcC
Confidence                 1        23 3899999864321                    1233669999999888887654     458


Q ss_pred             eEEEEeecCcccCCCc
Q 028508          152 IRVNGIAPGPIKDTAG  167 (208)
Q Consensus       152 i~v~~v~pG~v~t~~~  167 (208)
                      +++..++||+|-.+-.
T Consensus       187 Lpv~I~Rpg~I~gds~  202 (382)
T COG3320         187 LPVTIFRPGYITGDSR  202 (382)
T ss_pred             CCeEEEecCeeeccCc
Confidence            9999999999976544

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.26  E-value=3.3e-05  Score=63.85  Aligned_cols=136  Identities=12%  Similarity=0.014  Sum_probs=88.4

Q ss_pred             CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------
Q 028508           48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------  120 (208)
Q Consensus        48 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------  120 (208)
                      ++|+|||.|+...+.... .   +-...+++|+.++..++.++...             +.++|++||...+.       
T Consensus       184 ~~D~ViHlAa~~~~~~~~-~---~p~~~~~~Nv~gT~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~  246 (436)
T PLN02166        184 EVDQIYHLACPASPVHYK-Y---NPVKTIKTNVMGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLEHPQ  246 (436)
T ss_pred             CCCEEEECceeccchhhc-c---CHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECcHHHhCCCCCCCC
Confidence            689999999865432211 1   23567889999999999887642             23699999976432       


Q ss_pred             ---------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC--ChHHHHHhhhhhhc----
Q 028508          121 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMA----  185 (208)
Q Consensus       121 ---------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~----  185 (208)
                               +..+...|+.+|.+.+.+++...+.    .|+++..++|+.++.|......  .-..+......+.+    
T Consensus       247 ~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~----~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~  322 (436)
T PLN02166        247 KETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG----AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVY  322 (436)
T ss_pred             CccccccCCCCCCCCchHHHHHHHHHHHHHHHHH----hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEe
Confidence                     1112456999999999999877654    3688999999999887532110  01112111211111    


Q ss_pred             -----CCCCCCHHHHHHHHHHhcC
Q 028508          186 -----AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       186 -----~~~~~~~~dva~~~~~L~s  204 (208)
                           .+.+...+|++++++.++.
T Consensus       323 g~g~~~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        323 GDGKQTRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHh
Confidence                 2235788999999988764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.25  E-value=1.3e-05  Score=66.59  Aligned_cols=66  Identities=20%  Similarity=0.233  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+.+.+++..++.|..          .|+||+++|..+..   ....|+++|+++.+|+++++.|+  ++|++++.|.|+
T Consensus       100 ~~~~~~~~~~l~~l~~----------~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~--~~gi~v~~i~~~  164 (450)
T PRK08261        100 KALYEFFHPVLRSLAP----------CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL--RRGATAQLVYVA  164 (450)
T ss_pred             HHHHHHHHHHHHhccC----------CCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh--hcCCEEEEEecC
Confidence            3455667777776643          58999999986653   34569999999999999999999  469999999887


Q ss_pred             c
Q 028508          161 P  161 (208)
Q Consensus       161 ~  161 (208)
                      +
T Consensus       165 ~  165 (450)
T PRK08261        165 P  165 (450)
T ss_pred             C
Confidence            4

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.23  E-value=5.8e-05  Score=65.83  Aligned_cols=128  Identities=17%  Similarity=0.127  Sum_probs=85.4

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      ..+.+.|.+.+.++.+...|++|.+.+...+...     ++|+|||+|+...... .+...++-+..+++|+.++..+++
T Consensus       394 ~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~-~~~~~~~~~~~~~~N~~gt~~l~~  467 (668)
T PLN02260        394 GLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLAD  467 (668)
T ss_pred             HHHHHHHHhCCCeEEeeccccccHHHHHHHHHhh-----CCCEEEECCcccCCCC-CChHHhCHHHHHHHHhHHHHHHHH
Confidence            4566666666655655678999999888776653     7999999999754321 122234456788999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------c-------CCchhHHHHhHHHHHHHHHHHHHHhcCCC
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYT-----------A-------TWYQIHVSAAKAAVDSITRSLALEWGTDY  150 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~-------~~~~~~y~~sKaa~~~~~~~la~e~~~~~  150 (208)
                      ++...             +.++|++||...+.           +       .+....|+.+|.+.+.+++....    -.
T Consensus       468 a~~~~-------------g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~----~~  530 (668)
T PLN02260        468 VCREN-------------GLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN----VC  530 (668)
T ss_pred             HHHHc-------------CCeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh----he
Confidence            98642             23466665543211           1       12236799999999999987632    23


Q ss_pred             CeEEEEeec
Q 028508          151 AIRVNGIAP  159 (208)
Q Consensus       151 gi~v~~v~p  159 (208)
                      .+|+..+..
T Consensus       531 ~~r~~~~~~  539 (668)
T PLN02260        531 TLRVRMPIS  539 (668)
T ss_pred             EEEEEEecc
Confidence            567766653

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.22  E-value=0.00011  Score=63.91  Aligned_cols=117  Identities=14%  Similarity=0.054  Sum_probs=79.4

Q ss_pred             CCeeEEEcCCCCHHHH--HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028508           20 IPAIGLEGDVRKREDA--VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (208)
                      .++..+.+|++|++..  ...++.+    .++|+|||+|+.....    .+   .....++|+.++..+++++..    .
T Consensus        51 ~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~----~  115 (657)
T PRK07201         51 DRVVPLVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAER----L  115 (657)
T ss_pred             CcEEEEecccCCccCCcCHHHHHHh----cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHHh----c
Confidence            4688899999985320  1112222    3799999999964321    12   345668899999998887643    2


Q ss_pred             CCCCCCCCCCceEEEeccccccccC-------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           98 GRGQASSSSGGIIINISATLHYTAT-------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        98 ~~~~~~~~~~~~iv~iss~~~~~~~-------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      +        ..++|++||...+...             .....|+.+|...+.+++.       ..|+++..++|+.|..
T Consensus       116 ~--------~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~G  180 (657)
T PRK07201        116 Q--------AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE-------ECGLPWRVYRPAVVVG  180 (657)
T ss_pred             C--------CCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHH-------cCCCcEEEEcCCeeee
Confidence            2        3569999997654211             1234699999999888752       2378999999999987


Q ss_pred             CC
Q 028508          165 TA  166 (208)
Q Consensus       165 ~~  166 (208)
                      +.
T Consensus       181 ~~  182 (657)
T PRK07201        181 DS  182 (657)
T ss_pred             cC
Confidence            53

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.20  E-value=1.8e-05  Score=62.69  Aligned_cols=146  Identities=14%  Similarity=0.011  Sum_probs=87.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|++++..+++       ++|+|||.++....      +   .....++|+.++..+.+++..    .+  
T Consensus        44 ~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~~~------~---~~~~~~~~~~~~~~l~~aa~~----~g--  101 (317)
T CHL00194         44 GAELVYGDLSLPETLPPSFK-------GVTAIIDASTSRPS------D---LYNAKQIDWDGKLALIEAAKA----AK--  101 (317)
T ss_pred             CCEEEECCCCCHHHHHHHHC-------CCCEEEECCCCCCC------C---ccchhhhhHHHHHHHHHHHHH----cC--
Confidence            47788999999998877665       68999998764221      1   123456788888888777653    22  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHh-
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-  179 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~-  179 (208)
                            -.++|++||..+.. . +...|..+|...+.+.+        ..|+++..++|+.+..........+ ..... 
T Consensus       102 ------vkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~--------~~~l~~tilRp~~~~~~~~~~~~~~-~~~~~~  164 (317)
T CHL00194        102 ------IKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLK--------KSGIPYTIFRLAGFFQGLISQYAIP-ILEKQP  164 (317)
T ss_pred             ------CCEEEEeccccccc-c-CCChHHHHHHHHHHHHH--------HcCCCeEEEeecHHhhhhhhhhhhh-hccCCc
Confidence                  24699999864331 1 23447778887766543        3468888999986653211100000 00000 


Q ss_pred             -h-hhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          180 -A-TDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       180 -~-~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                       + ........+...+|+|+++..++..
T Consensus       165 ~~~~~~~~~~~~i~v~Dva~~~~~~l~~  192 (317)
T CHL00194        165 IWITNESTPISYIDTQDAAKFCLKSLSL  192 (317)
T ss_pred             eEecCCCCccCccCHHHHHHHHHHHhcC
Confidence             0 0000112345679999999887753

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=98.19  E-value=1.7e-05  Score=61.50  Aligned_cols=107  Identities=17%  Similarity=0.112  Sum_probs=83.1

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +..+.++++|+.|.+.++++++..     ++|.|+|-|+.....    .+++.....+..|+.|++.++..+..+-    
T Consensus        53 ~~~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~Hfa~~~~vg----eS~~~p~~Y~~nNi~gtlnlLe~~~~~~----  119 (343)
T KOG1371|consen   53 GKSVFFVEGDLNDAEALEKLFSEV-----KFDAVMHFAALAAVG----ESMENPLSYYHNNIAGTLNLLEVMKAHN----  119 (343)
T ss_pred             CCceEEEEeccCCHHHHHHHHhhc-----CCceEEeehhhhccc----hhhhCchhheehhhhhHHHHHHHHHHcC----
Confidence            467999999999999999999876     699999999876543    2344447788899999999988876543    


Q ss_pred             CCCCCCCCCceEEEeccccccc-----------cC-CchhHHHHhHHHHHHHHHHHHHHh
Q 028508           99 RGQASSSSGGIIINISATLHYT-----------AT-WYQIHVSAAKAAVDSITRSLALEW  146 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~-----------~~-~~~~~y~~sKaa~~~~~~~la~e~  146 (208)
                              -..+|+.||..-+.           +. .+...|+.+|-+++.+++.+...+
T Consensus       120 --------~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  120 --------VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             --------CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence                    24488888876432           11 267789999999999999887654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.16  E-value=8.5e-06  Score=61.38  Aligned_cols=77  Identities=13%  Similarity=0.087  Sum_probs=58.9

Q ss_pred             HHHHHHHHhcCCCeeE------------EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIG------------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~------------~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~   76 (208)
                      ..+++.+.+.|.++..            ..+|+++.+++.++++.+.+.++++|++|||||+....++.+.+.++|++++
T Consensus        29 ~AIA~~la~~Ga~Vvlv~~~~~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~  108 (227)
T TIGR02114        29 KIITETFLSAGHEVTLVTTKRALKPEPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTDLEQVQASD  108 (227)
T ss_pred             HHHHHHHHHCCCEEEEEcChhhcccccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCCHHHHhhhc
Confidence            3555666666655443            2479999999999999999999999999999998766778889999999874


Q ss_pred             HHHHHHHHHHHH
Q 028508           77 EIDSVGTFIMCH   88 (208)
Q Consensus        77 ~~n~~~~~~l~~   88 (208)
                      .   .+.+.+.+
T Consensus       109 ~---~~~~~~~~  117 (227)
T TIGR02114       109 N---LNEFLSKQ  117 (227)
T ss_pred             c---hhhhhccc
Confidence            4   34455444

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.11  E-value=0.00021  Score=67.20  Aligned_cols=157  Identities=11%  Similarity=0.096  Sum_probs=97.1

Q ss_pred             CeeEEEcCCCCHHHH--HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           21 PAIGLEGDVRKREDA--VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ++.++.+|++++.--  ...++.+.   ..+|++||+|+....    ..+   +......|+.|+..+++.+..    .+
T Consensus      1035 ~i~~~~gDl~~~~lgl~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~----~~ 1100 (1389)
T TIGR03443      1035 RIEVVLGDLSKEKFGLSDEKWSDLT---NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAE----GK 1100 (1389)
T ss_pred             ceEEEeccCCCccCCcCHHHHHHHH---hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHh----CC
Confidence            678899999854210  11122222   379999999986431    122   334456799999999988743    12


Q ss_pred             CCCCCCCCCceEEEecccccccc-----------------C-----------CchhHHHHhHHHHHHHHHHHHHHhcCCC
Q 028508           99 RGQASSSSGGIIINISATLHYTA-----------------T-----------WYQIHVSAAKAAVDSITRSLALEWGTDY  150 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~-----------------~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~  150 (208)
                              ..+++++||...+..                 .           .....|+.+|.+.+.+++..+     ..
T Consensus      1101 --------~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-----~~ 1167 (1389)
T TIGR03443      1101 --------AKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-----KR 1167 (1389)
T ss_pred             --------CceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-----hC
Confidence                    346999999754311                 0           012359999999998887643     34


Q ss_pred             CeEEEEeecCcccCCCccCCCChHHHHHhhhh------hhc----CCCCCCHHHHHHHHHHhcC
Q 028508          151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------YMA----AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       151 gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~dva~~~~~L~s  204 (208)
                      |+++..++||.|..+..........+......      ..|    ...+...++++++++.++.
T Consensus      1168 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~ 1231 (1389)
T TIGR03443      1168 GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAAL 1231 (1389)
T ss_pred             CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHh
Confidence            79999999999987643332222222221111      112    1235678999999988864

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK05865 hypothetical protein; Provisional

Probab=98.11  E-value=1.7e-05  Score=70.04  Aligned_cols=124  Identities=14%  Similarity=0.030  Sum_probs=84.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       ++|+|||+|+...+             .+++|+.++..+++++.    +.+  
T Consensus        41 ~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa~----~~g--   94 (854)
T PRK05865         41 SADFIAADIRDATAVESAMT-------GADVVAHCAWVRGR-------------NDHINIDGTANVLKAMA----ETG--   94 (854)
T ss_pred             CceEEEeeCCCHHHHHHHHh-------CCCEEEECCCcccc-------------hHHHHHHHHHHHHHHHH----HcC--
Confidence            35678899999999887765       58999999975321             35789999888776653    333  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                            .++||++||..              |.+.+.+++        .+|+.+..++|+.++.|...      .+....
T Consensus        95 ------vkr~V~iSS~~--------------K~aaE~ll~--------~~gl~~vILRp~~VYGP~~~------~~i~~l  140 (854)
T PRK05865         95 ------TGRIVFTSSGH--------------QPRVEQMLA--------DCGLEWVAVRCALIFGRNVD------NWVQRL  140 (854)
T ss_pred             ------CCeEEEECCcH--------------HHHHHHHHH--------HcCCCEEEEEeceEeCCChH------HHHHHH
Confidence                  35799999963              776666553        23789999999999876411      111111


Q ss_pred             hh--hhcC------CCCCCHHHHHHHHHHhcC
Q 028508          181 TD--YMAA------YKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       181 ~~--~~~~------~~~~~~~dva~~~~~L~s  204 (208)
                      ..  ..+.      ..+...+|++++++.++.
T Consensus       141 l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~  172 (854)
T PRK05865        141 FALPVLPAGYADRVVQVVHSDDAQRLLVRALL  172 (854)
T ss_pred             hcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence            10  1111      125778999999988874

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.62  E-value=0.0003  Score=56.17  Aligned_cols=121  Identities=12%  Similarity=0.054  Sum_probs=86.7

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++..+.+|+.|..++...+.       +. .+||+|....+.    ....+-+..+++|+.|+..+..++...    + 
T Consensus        55 ~~v~~~~~D~~~~~~i~~a~~-------~~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~~----~-  117 (361)
T KOG1430|consen   55 GRVTVILGDLLDANSISNAFQ-------GA-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEACKEL----G-  117 (361)
T ss_pred             CceeEEecchhhhhhhhhhcc-------Cc-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHHHHh----C-
Confidence            456778889988888887765       56 777777755432    233346778899999998888887643    2 


Q ss_pred             CCCCCCCCceEEEeccccccc------------cCC--chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          100 GQASSSSGGIIINISATLHYT------------ATW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~------------~~~--~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                             -.++|++||.....            +.|  ..-.|+.+|+-.+.+++....    ..+....+++|-.|+.|
T Consensus       118 -------v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~----~~~l~T~aLR~~~IYGp  186 (361)
T KOG1430|consen  118 -------VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG----SDDLYTCALRPPGIYGP  186 (361)
T ss_pred             -------CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC----CCCeeEEEEccccccCC
Confidence                   35699999986443            223  224799999988888876542    34688999999999987


Q ss_pred             Ccc
Q 028508          166 AGV  168 (208)
Q Consensus       166 ~~~  168 (208)
                      .-.
T Consensus       187 gd~  189 (361)
T KOG1430|consen  187 GDK  189 (361)
T ss_pred             CCc
Confidence            544

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.60  E-value=0.00035  Score=51.74  Aligned_cols=156  Identities=15%  Similarity=0.091  Sum_probs=92.0

Q ss_pred             EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 028508           26 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED--LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (208)
Q Consensus        26 ~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (208)
                      .+|+++.++.+++++..     ++.++|+.|+..+- .+.+  .+.+=|...+++|-.    .++.+..+    +     
T Consensus        38 d~DLt~~a~t~~lF~~e-----kPthVIhlAAmVGG-lf~N~~ynldF~r~Nl~indN----Vlhsa~e~----g-----   98 (315)
T KOG1431|consen   38 DADLTNLADTRALFESE-----KPTHVIHLAAMVGG-LFHNNTYNLDFIRKNLQINDN----VLHSAHEH----G-----   98 (315)
T ss_pred             cccccchHHHHHHHhcc-----CCceeeehHhhhcc-hhhcCCCchHHHhhcceechh----HHHHHHHh----c-----
Confidence            78999999999999875     78888888865442 2222  334445555444432    22222221    1     


Q ss_pred             CCCCceEEEeccccccc----------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          104 SSSGGIIINISATLHYT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       104 ~~~~~~iv~iss~~~~~----------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                         -.++|+..|..-+-                +.|..-.|+-+|.-+.-..+..+.+++    -...++.|--+..|.-
T Consensus        99 ---v~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg----~~~tsviPtNvfGphD  171 (315)
T KOG1431|consen   99 ---VKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG----RDYTSVIPTNVFGPHD  171 (315)
T ss_pred             ---hhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CceeeeccccccCCCC
Confidence               11245554443221                234555699999777766687777664    4556666766665532


Q ss_pred             cCCC-----ChHHHH-------------HhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          168 VSKL-----APEEIR-------------SKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       168 ~~~~-----~~~~~~-------------~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .-.+     .+.-+.             ..+....|++.+....|+|+.++|++.+.+
T Consensus       172 Nfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~  229 (315)
T KOG1431|consen  172 NFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYE  229 (315)
T ss_pred             CCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhc
Confidence            2111     111111             113344688888999999999999987654

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.58  E-value=0.00011  Score=65.69  Aligned_cols=126  Identities=17%  Similarity=0.107  Sum_probs=105.8

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      ....+..++.|.++..-..|++..+..+.++++.. +++.+-+++|-|....+..+.+.+++.|...-+..+.|+.++-+
T Consensus      1810 a~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~ 1888 (2376)
T KOG1202|consen 1810 ALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDR 1888 (2376)
T ss_pred             HHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhh
Confidence            34566677778888888889999999999998654 46899999999999999999999999999999999999998776


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHH
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE  145 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e  145 (208)
                      .-....-+          ---+|.+||...-++..++..|+-+..+|+.+++.-+.+
T Consensus      1889 ~sRe~C~~----------LdyFv~FSSvscGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1889 VSREICPE----------LDYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             hhhhhCcc----------cceEEEEEeecccCCCCcccccchhhHHHHHHHHHhhhc
Confidence            65544322          234899999999999999999999999999999986544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.56  E-value=0.0016  Score=50.61  Aligned_cols=143  Identities=10%  Similarity=0.013  Sum_probs=76.3

Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--
Q 028508           44 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--  121 (208)
Q Consensus        44 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--  121 (208)
                      +.+.++|+|||+||.....  .....+.....+++|+.++..+++++...    +.      ....+|+.|+...+..  
T Consensus        53 ~~~~~~D~Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~~~~i~~S~~~~yg~~~  120 (292)
T TIGR01777        53 EALEGADAVINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAA----EQ------KPKVFISASAVGYYGTSE  120 (292)
T ss_pred             hhcCCCCEEEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhc----CC------CceEEEEeeeEEEeCCCC
Confidence            3445799999999964421  12334455667889999988888887532    10      0123444444321110  


Q ss_pred             ---------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHH--HHHhhh-----hhhc
Q 028508          122 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKAT-----DYMA  185 (208)
Q Consensus       122 ---------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~--~~~~~~-----~~~~  185 (208)
                               ..+...|+..+...+....    .+. ..++.+..++|+.+..+...  .....  ......     ....
T Consensus       121 ~~~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~-~~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~g~~~~  193 (292)
T TIGR01777       121 DRVFTEEDSPAGDDFLAELCRDWEEAAQ----AAE-DLGTRVVLLRTGIVLGPKGG--ALAKMLPPFRLGLGGPLGSGRQ  193 (292)
T ss_pred             CCCcCcccCCCCCChHHHHHHHHHHHhh----hch-hcCCceEEEeeeeEECCCcc--hhHHHHHHHhcCcccccCCCCc
Confidence                     0011123333333333222    223 45799999999999876321  11100  000000     0111


Q ss_pred             CCCCCCHHHHHHHHHHhcCC
Q 028508          186 AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       186 ~~~~~~~~dva~~~~~L~s~  205 (208)
                      ..-+...+|+++++.+++..
T Consensus       194 ~~~~i~v~Dva~~i~~~l~~  213 (292)
T TIGR01777       194 WFSWIHIEDLVQLILFALEN  213 (292)
T ss_pred             ccccEeHHHHHHHHHHHhcC
Confidence            23457889999999998754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=97.37  E-value=0.0019  Score=49.34  Aligned_cols=185  Identities=14%  Similarity=0.162  Sum_probs=94.6

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHH----HHHHHHHHhC-CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVR----VVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~----~~~~~~~~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      ..+...|.+.|-++..+.=+....+....    ..+.+.+... ++|+|||-||..-...-  .+.+.=+..+    .+.
T Consensus        12 ~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rr--Wt~~~K~~i~----~SR   85 (297)
T COG1090          12 RALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERR--WTEKQKEEIR----QSR   85 (297)
T ss_pred             HHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCcccccc--CCHHHHHHHH----HHH
Confidence            34566777766666555443333222211    2333333322 69999999996543321  2333323333    345


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc------CCCCeEEEEe
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG------TDYAIRVNGI  157 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~------~~~gi~v~~v  157 (208)
                      +..++.+...+.+...       +.++..=+|..++++......|--.....+.|...+..+|.      ...|+||..+
T Consensus        86 i~~T~~L~e~I~~~~~-------~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvll  158 (297)
T COG1090          86 INTTEKLVELIAASET-------KPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLL  158 (297)
T ss_pred             hHHHHHHHHHHHhccC-------CCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEE
Confidence            5556666655553321       34444445556666654444433323333333333333221      1458999999


Q ss_pred             ecCcccCCCc--cCCCChH-HH--HHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          158 APGPIKDTAG--VSKLAPE-EI--RSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       158 ~pG~v~t~~~--~~~~~~~-~~--~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +-|.|..+..  ...+.+. .+  ...+...-..-.+...+|+.+++.||+.++
T Consensus       159 RtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~  212 (297)
T COG1090         159 RTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE  212 (297)
T ss_pred             EEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence            9999987531  1111111 10  011111222223678899999999998774

>PLN02503 fatty acyl-CoA reductase 2

Probab=97.33  E-value=0.0091  Score=51.36  Aligned_cols=73  Identities=18%  Similarity=0.288  Sum_probs=50.2

Q ss_pred             CCeeEEEcCCCCHH------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           20 IPAIGLEGDVRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (208)
Q Consensus        20 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (208)
                      .+++.+.+|+++++      ..+.+.    +   .+|+|||+|+....       .+..+..+++|+.|+..+++.+...
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~----~---~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~  257 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIA----K---EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC  257 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHH----h---cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            36888999999873      233222    2   69999999986542       1346678889999999999887542


Q ss_pred             HHhcCCCCCCCCCCceEEEecccc
Q 028508           94 LKKGGRGQASSSSGGIIINISATL  117 (208)
Q Consensus        94 ~~~~~~~~~~~~~~~~iv~iss~~  117 (208)
                      -   .        -.++|++|+..
T Consensus       258 ~---~--------lk~fV~vSTay  270 (605)
T PLN02503        258 K---K--------LKLFLQVSTAY  270 (605)
T ss_pred             C---C--------CCeEEEccCce
Confidence            1   1        23477777764

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.33  E-value=0.0005  Score=52.68  Aligned_cols=165  Identities=17%  Similarity=0.133  Sum_probs=102.0

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .+++.+.+|++|...+.++++.+     .+|-|.|-++....    ..+.+..+.+.+++..|++.++.++.-.- . . 
T Consensus        55 ~~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS~V----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~-~-  122 (345)
T COG1089          55 PRLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQSHV----GVSFEQPEYTADVDAIGTLRLLEAIRILG-E-K-  122 (345)
T ss_pred             ceeEEEeccccchHHHHHHHHhc-----Cchhheeccccccc----cccccCcceeeeechhHHHHHHHHHHHhC-C-c-
Confidence            45789999999999999999987     79998888875443    34445556778899999999998875332 1 1 


Q ss_pred             CCCCCCCCceEEEecccccc-----------ccCCchhHHHHhHHHHHHHHHHHHHHhc--CCCCeEEEEeecCcccCCC
Q 028508          100 GQASSSSGGIIINISATLHY-----------TATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~-----------~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~gi~v~~v~pG~v~t~~  166 (208)
                             ..++..-||.--+           .|+.+.+.|+++|....-++...+..+.  ...||-.|.=+|.  ....
T Consensus       123 -------~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~--Rge~  193 (345)
T COG1089         123 -------KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL--RGET  193 (345)
T ss_pred             -------ccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC--Cccc
Confidence                   3456666554322           2566888999999988877777765542  1335555544442  2111


Q ss_pred             ccCCCChHHHHH---h------hhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          167 GVSKLAPEEIRS---K------ATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       167 ~~~~~~~~~~~~---~------~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +...........   .      +......+-++.+.|..++++.++..
T Consensus       194 FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq  241 (345)
T COG1089         194 FVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ  241 (345)
T ss_pred             eehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHcc
Confidence            111100000000   0      00112334577788888887776654

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.15  E-value=0.02  Score=48.62  Aligned_cols=178  Identities=14%  Similarity=0.012  Sum_probs=108.2

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHh----C----------CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHF----G----------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~----g----------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      |.....+..++++..+++.+++.|-.+-    |          .++++|=-|.....+.+.+.... -+..+++-++...
T Consensus       450 ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~  528 (866)
T COG4982         450 GAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVL  528 (866)
T ss_pred             CceEEEEeccccchhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHH
Confidence            4556789999999999999999986421    1          35777777776555555554432 2445566666655


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .+.-.+.++--.++.     ..+-++|.-+|.. ..-+.+.+.|+-+|++++.++..+..|-.=...+.+..-..||+..
T Consensus       529 Rliggl~~~~s~r~v-----~~R~hVVLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrG  602 (866)
T COG4982         529 RLIGGLKKQGSSRGV-----DTRLHVVLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRG  602 (866)
T ss_pred             HHHHHhhhhccccCc-----ccceEEEecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecc
Confidence            555444333222211     1123455555542 2235678889999999999988777663101235556666788875


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +..   |...+......++.- .+..+++|+|..++-||+.++
T Consensus       603 TGL---Mg~Ndiiv~aiEk~G-V~tyS~~EmA~~LLgL~saev  641 (866)
T COG4982         603 TGL---MGHNDIIVAAIEKAG-VRTYSTDEMAFNLLGLASAEV  641 (866)
T ss_pred             ccc---cCCcchhHHHHHHhC-ceecCHHHHHHHHHhhccHHH
Confidence            432   222233322222221 246688999999999998653

>PRK08309 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0037  Score=45.26  Aligned_cols=56  Identities=20%  Similarity=0.178  Sum_probs=45.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG   58 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~   58 (208)
                      +|+.++++.+...+.. ..++..+.+|++|++++.++++.+.+.+|++|++|+..-.
T Consensus        30 ~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~   85 (177)
T PRK08309         30 ARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHS   85 (177)
T ss_pred             ECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence            5777777776665643 4468889999999999999999999989999999987754

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=96.66  E-value=0.0053  Score=48.60  Aligned_cols=52  Identities=13%  Similarity=0.180  Sum_probs=43.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCC----CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 028508            1 MGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~   59 (208)
                      .|||+++|+++++.+.+..+    ....+.||.+|++++.+++.       .-.+|||++|-.
T Consensus        39 AGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-------~~~vivN~vGPy   94 (423)
T KOG2733|consen   39 AGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-------QARVIVNCVGPY   94 (423)
T ss_pred             ecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-------hhEEEEeccccc
Confidence            48999999999999987642    34488999999999999887       567899999843

>PRK12320 hypothetical protein; Provisional

Probab=96.55  E-value=0.13  Score=45.27  Aligned_cols=133  Identities=9%  Similarity=-0.080  Sum_probs=76.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|+++.. +.+++       .++|+|||.++....      .      ...+|+.++.++++++..    .   
T Consensus        41 ~ve~v~~Dl~d~~-l~~al-------~~~D~VIHLAa~~~~------~------~~~vNv~Gt~nLleAA~~----~---   93 (699)
T PRK12320         41 RVDYVCASLRNPV-LQELA-------GEADAVIHLAPVDTS------A------PGGVGITGLAHVANAAAR----A---   93 (699)
T ss_pred             CceEEEccCCCHH-HHHHh-------cCCCEEEEcCccCcc------c------hhhHHHHHHHHHHHHHHH----c---
Confidence            3567888998873 33322       268999999985321      0      124788999998887742    2   


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                            +.++|++||..+.   +  ..|.    .    .+.+..    ..++.+..+.++.++.+.....  .......+
T Consensus        94 ------GvRiV~~SS~~G~---~--~~~~----~----aE~ll~----~~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~  148 (699)
T PRK12320         94 ------GARLLFVSQAAGR---P--ELYR----Q----AETLVS----TGWAPSLVIRIAPPVGRQLDWM--VCRTVATL  148 (699)
T ss_pred             ------CCeEEEEECCCCC---C--cccc----H----HHHHHH----hcCCCEEEEeCceecCCCCccc--HhHHHHHH
Confidence                  3469999886421   1  1122    1    222221    2347788999999988733211  11111121


Q ss_pred             hhhhcCCCC---CCHHHHHHHHHHhcCC
Q 028508          181 TDYMAAYKF---GEKWDIAMAALYLASD  205 (208)
Q Consensus       181 ~~~~~~~~~---~~~~dva~~~~~L~s~  205 (208)
                      .......+.   ...+|++++++.++..
T Consensus       149 l~~~~~~~pI~vIyVdDvv~alv~al~~  176 (699)
T PRK12320        149 LRSKVSARPIRVLHLDDLVRFLVLALNT  176 (699)
T ss_pred             HHHHHcCCceEEEEHHHHHHHHHHHHhC
Confidence            111111222   4889999999887753

>PLN00016 RNA-binding protein; Provisional

Probab=96.44  E-value=0.044  Score=44.57  Aligned_cols=89  Identities=11%  Similarity=0.043  Sum_probs=50.3

Q ss_pred             ceEEEeccccccccCCchh-------HHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          108 GIIINISATLHYTATWYQI-------HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       108 ~~iv~iss~~~~~~~~~~~-------~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                      .++|++||...+.......       ....+|...+.+.+        ..++.+..++|+.++.+...... ...+....
T Consensus       158 kr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~--------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~~~~  228 (378)
T PLN00016        158 KQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQ--------KLGVNWTSFRPQYIYGPGNNKDC-EEWFFDRL  228 (378)
T ss_pred             CEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHH--------HcCCCeEEEeceeEECCCCCCch-HHHHHHHH
Confidence            5799999986543211100       00116777665543        34789999999999977533211 11122222


Q ss_pred             hhhh--c-------CCCCCCHHHHHHHHHHhcCC
Q 028508          181 TDYM--A-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       181 ~~~~--~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ....  +       ...+...+|++++++.++..
T Consensus       229 ~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~  262 (378)
T PLN00016        229 VRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGN  262 (378)
T ss_pred             HcCCceeecCCCCeeeceecHHHHHHHHHHHhcC
Confidence            2111  1       11255789999999988765

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.43  E-value=0.06  Score=41.83  Aligned_cols=140  Identities=13%  Similarity=-0.016  Sum_probs=75.7

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      +..+.+|+.|++++..+++.. +...+ +|.++++++...         +...            ..+.++...++.+  
T Consensus        41 ~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~~~~~~~---------~~~~------------~~~~~i~aa~~~g--   96 (285)
T TIGR03649        41 EKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYLVAPPIP---------DLAP------------PMIKFIDFARSKG--   96 (285)
T ss_pred             CccccccCCCHHHHHHHHhcc-cCcCCceeEEEEeCCCCC---------ChhH------------HHHHHHHHHHHcC--
Confidence            345788999999999888643 22235 999998876321         0111            1122333444443  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH--
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS--  178 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~--  178 (208)
                            -.+||++||.....+.+       .+..++.+.+    +   ..|+....++|+++..+........ ....  
T Consensus        97 ------v~~~V~~Ss~~~~~~~~-------~~~~~~~~l~----~---~~gi~~tilRp~~f~~~~~~~~~~~-~~~~~~  155 (285)
T TIGR03649        97 ------VRRFVLLSASIIEKGGP-------AMGQVHAHLD----S---LGGVEYTVLRPTWFMENFSEEFHVE-AIRKEN  155 (285)
T ss_pred             ------CCEEEEeeccccCCCCc-------hHHHHHHHHH----h---ccCCCEEEEeccHHhhhhccccccc-ccccCC
Confidence                  35799999865433221       1222222221    1   1378999999998875532111100 0000  


Q ss_pred             hhh--hhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          179 KAT--DYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       179 ~~~--~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ...  .......+...+|+|+++..++.++
T Consensus       156 ~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~  185 (285)
T TIGR03649       156 KIYSATGDGKIPFVSADDIARVAYRALTDK  185 (285)
T ss_pred             eEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence            000  0111124678999999999887754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=95.82  E-value=0.037  Score=41.83  Aligned_cols=74  Identities=9%  Similarity=0.034  Sum_probs=47.4

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCC------------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRK------------REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~------------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~   76 (208)
                      ..+++.+.+.|.+++.+..+...            .++..++.+.+.+.++.+|++|||||.....+....+.++|..++
T Consensus        30 ~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~  109 (229)
T PRK06732         30 KIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDYTPVYMTDLEEVSASD  109 (229)
T ss_pred             HHHHHHHHhCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCceehhhhhhhhhhhhh
Confidence            45566666666666554322110            123455555555666789999999998765566667788888888


Q ss_pred             HHHHHH
Q 028508           77 EIDSVG   82 (208)
Q Consensus        77 ~~n~~~   82 (208)
                      ++|...
T Consensus       110 ~v~~~~  115 (229)
T PRK06732        110 NLNEFL  115 (229)
T ss_pred             hhhhhh
Confidence            876543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=95.82  E-value=0.2  Score=50.20  Aligned_cols=142  Identities=13%  Similarity=0.087  Sum_probs=89.4

Q ss_pred             HHHHHHHHhcCCCeeEEE--------------------cCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCC
Q 028508            9 RSAVAALHSLGIPAIGLE--------------------GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS   68 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~--------------------~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~   68 (208)
                      ..+.+.|.+.|..+..+.                    ..-.+.+++..+++.+....++++.+||-.+..... ....+
T Consensus      1769 ~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~-~~~~~ 1847 (2582)
T TIGR02813      1769 GVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFIHLQPQHKSV-ADKVD 1847 (2582)
T ss_pred             HHHHHHHHhCCCeEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEEEeccccccc-ccccc
Confidence            457778888887665441                    223456778888888877778999999977643210 00000


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHH--------HHhHHHHHHHHH
Q 028508           69 PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--------SAAKAAVDSITR  140 (208)
Q Consensus        69 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y--------~~sKaa~~~~~~  140 (208)
                      ...+...-...+...|.+.|.+.+.+...+        ++.++.++...|-.++......        ....+++.+|+|
T Consensus      1848 ~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~--------~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~K 1919 (2582)
T TIGR02813      1848 AIELPEAAKQSLMLAFLFAKLLNVKLATNA--------RASFVTVSRIDGGFGYSNGDADSGTQQVKAELNQAALAGLTK 1919 (2582)
T ss_pred             ccccchhhHHHHHHHHHHHHhhchhhccCC--------CeEEEEEEecCCccccCCccccccccccccchhhhhHHHHHH
Confidence            001111112344456777777766654433        5789999998776665332211        235789999999


Q ss_pred             HHHHHhcCCCCeEEEEeecC
Q 028508          141 SLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus       141 ~la~e~~~~~gi~v~~v~pG  160 (208)
                      ++++|+. .-.+|...+.|.
T Consensus      1920 tl~~E~P-~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1920 TLNHEWN-AVFCRALDLAPK 1938 (2582)
T ss_pred             hHHHHCC-CCeEEEEeCCCC
Confidence            9999996 666777777764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.20  E-value=0.063  Score=40.39  Aligned_cols=150  Identities=15%  Similarity=0.066  Sum_probs=75.9

Q ss_pred             HHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 028508           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA   90 (208)
Q Consensus        11 ~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   90 (208)
                      ..+.++..|  +..+.+|..|.+++.++++       ++|.+|++.+...        ..+.+        ....++.++
T Consensus        36 ~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~~~~~~~~--------~~~~~--------~~~~li~Aa   90 (233)
T PF05368_consen   36 RAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVFSVTPPSH--------PSELE--------QQKNLIDAA   90 (233)
T ss_dssp             HHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEEEESSCSC--------CCHHH--------HHHHHHHHH
T ss_pred             hhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEEeecCcch--------hhhhh--------hhhhHHHhh
Confidence            345555555  4667999999999988876       8999999887533        11111        222334444


Q ss_pred             HHHHHhcCCCCCCCCCCceEEEeccccccccC----CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508           91 LKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                      ...-.            .++| .||.......    .+....-..|..++.+.+        ..|++...|+||+...+.
T Consensus        91 ~~agV------------k~~v-~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~--------~~~i~~t~i~~g~f~e~~  149 (233)
T PF05368_consen   91 KAAGV------------KHFV-PSSFGADYDESSGSEPEIPHFDQKAEIEEYLR--------ESGIPYTIIRPGFFMENL  149 (233)
T ss_dssp             HHHT-------------SEEE-ESEESSGTTTTTTSTTHHHHHHHHHHHHHHHH--------HCTSEBEEEEE-EEHHHH
T ss_pred             hcccc------------ceEE-EEEecccccccccccccchhhhhhhhhhhhhh--------hccccceeccccchhhhh
Confidence            33211            2365 4555433311    112223345666655444        337889999999776432


Q ss_pred             ccCCCC---hHH---HHHhhhhhhcCCCC-CCHHHHHHHHHHhcCCC
Q 028508          167 GVSKLA---PEE---IRSKATDYMAAYKF-GEKWDIAMAALYLASDA  206 (208)
Q Consensus       167 ~~~~~~---~~~---~~~~~~~~~~~~~~-~~~~dva~~~~~L~s~~  206 (208)
                      ......   ...   .............+ .+.+|+|+.+..++.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p  196 (233)
T PF05368_consen  150 LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDP  196 (233)
T ss_dssp             HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSG
T ss_pred             hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcCh
Confidence            211100   000   00000000000123 37799999999887764

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=95.08  E-value=0.32  Score=37.85  Aligned_cols=150  Identities=15%  Similarity=0.082  Sum_probs=89.1

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      +++.+...|+.|+++++++++       +-+++||-.|--.+..  +.+      ..++|+.++-.+.+.+-.    .+ 
T Consensus       109 GQvl~~~fd~~DedSIr~vvk-------~sNVVINLIGrd~eTk--nf~------f~Dvn~~~aerlAricke----~G-  168 (391)
T KOG2865|consen  109 GQVLFMKFDLRDEDSIRAVVK-------HSNVVINLIGRDYETK--NFS------FEDVNVHIAERLARICKE----AG-  168 (391)
T ss_pred             cceeeeccCCCCHHHHHHHHH-------hCcEEEEeeccccccC--Ccc------cccccchHHHHHHHHHHh----hC-
Confidence            367888999999999999987       7899999998644322  122      234676666666665533    22 


Q ss_pred             CCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHh
Q 028508          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~  179 (208)
                             --++|.+|+..+.  ....+-|--+|++.+--++   .++.     ....|.|..|....-.--.....++.+
T Consensus       169 -------VerfIhvS~Lgan--v~s~Sr~LrsK~~gE~aVr---dafP-----eAtIirPa~iyG~eDrfln~ya~~~rk  231 (391)
T KOG2865|consen  169 -------VERFIHVSCLGAN--VKSPSRMLRSKAAGEEAVR---DAFP-----EATIIRPADIYGTEDRFLNYYASFWRK  231 (391)
T ss_pred             -------hhheeehhhcccc--ccChHHHHHhhhhhHHHHH---hhCC-----cceeechhhhcccchhHHHHHHHHHHh
Confidence                   2359999988744  3344556677777654443   2332     244578877764321111111111111


Q ss_pred             hhhhhcCC--------CCCCHHHHHHHHHHhcCCCC
Q 028508          180 ATDYMAAY--------KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       180 ~~~~~~~~--------~~~~~~dva~~~~~L~s~~a  207 (208)
                       ..-+|+.        .+...-|||.+++-.+.|+.
T Consensus       232 -~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~  266 (391)
T KOG2865|consen  232 -FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD  266 (391)
T ss_pred             -cCceeeecCCcceeeccEEEehHHHHHHHhccCcc
Confidence             2223332        23455799999998887764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=94.55  E-value=0.25  Score=41.09  Aligned_cols=134  Identities=13%  Similarity=0.147  Sum_probs=79.6

Q ss_pred             HHHHHHHhcC----CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508           10 SAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus        10 ~~~~~l~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      ++.+.+.+..    .++..+.+|+++++---+.-+.. .....+|++||+|+....       .+.++..+.+|..|+..
T Consensus        65 ~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~  136 (467)
T KOG1221|consen   65 PLFEVLKEKKPEALEKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRN  136 (467)
T ss_pred             hHHHHHHhhCccceecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHH
Confidence            4444444432    46788999998765422211111 111379999999996543       23467788999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--------cC--------------------------------Cch
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------AT--------------------------------WYQ  125 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--------~~--------------------------------~~~  125 (208)
                      +.+.+.....-           ..+|.+|..-..-        ++                                ...
T Consensus       137 ~l~lak~~~~l-----------~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~P  205 (467)
T KOG1221|consen  137 VLQLAKEMVKL-----------KALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWP  205 (467)
T ss_pred             HHHHHHHhhhh-----------heEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCC
Confidence            99887654432           2366666654321        00                                112


Q ss_pred             hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       126 ~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      ..|.-+|+-.+++...-      ..++.+..++|..|.++...
T Consensus       206 NTYtfTKal~E~~i~~~------~~~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  206 NTYTFTKALAEMVIQKE------AENLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             CceeehHhhHHHHHHhh------ccCCCeEEEcCCceeccccC
Confidence            22555665555444432      45788999999888765433

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=94.31  E-value=0.086  Score=43.02  Aligned_cols=49  Identities=20%  Similarity=0.264  Sum_probs=37.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG   58 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~   58 (208)
                      ++|+.++++++.+++  .+.++..+++|+.|.+++.++++       ..|+|||++|.
T Consensus        29 a~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVin~~gp   77 (386)
T PF03435_consen   29 ADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDVVINCAGP   77 (386)
T ss_dssp             EESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSEEEE-SSG
T ss_pred             EECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCEEEECCcc
Confidence            378999998888876  45689999999999999888876       56999999984

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=93.94  E-value=2  Score=32.16  Aligned_cols=142  Identities=17%  Similarity=0.158  Sum_probs=76.8

Q ss_pred             HHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CC-----------------------------
Q 028508           14 ALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VP-----------------------------   63 (208)
Q Consensus        14 ~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~-----------------------------   63 (208)
                      ..++.|--...+..|.-+.+--++.++.+++.+|++|.||+.-+.+.. .+                             
T Consensus        17 ~A~~~Gl~a~~ingDAFS~e~K~~vI~~Ik~~~G~vDLvVYSLAsp~R~~P~tG~~~~S~LKpig~~~t~~tld~~~~~~   96 (237)
T PF12241_consen   17 AAEAAGLYAKSINGDAFSDEMKEQVIELIKEDFGKVDLVVYSLASPRRTDPDTGETYRSVLKPIGEPYTGKTLDTETDEV   96 (237)
T ss_dssp             HHHHTT--EEEEES-TTSHHHHHHHHHHHHHHTS-EEEEEE----SEEE-TTT--EEE----BSSS-EEEEEEETTTTEE
T ss_pred             HHHHCCCeeeecccccCCHHHHHHHHHHHHHhcCCccEEEEeccCCCCCCCCCCCEEeeeeccCCCccccceeecCCCeE
Confidence            334456667889999999999999999999999999999998765431 01                             


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--cCCchhHHHHhHHHHHH
Q 028508           64 ----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--ATWYQIHVSAAKAAVDS  137 (208)
Q Consensus        64 ----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~sKaa~~~  137 (208)
                          +...+.++++.++.|  +|--.+-.-+- .+.+.+    ....+.+-|..|=+....  +.-..+.-|.+|.=++.
T Consensus        97 ~~~tiepAt~eEi~~TvkV--MGGEDWe~Wi~-aL~~Ag----vLA~g~kTvAySYIG~~~T~pIY~~GTiG~AK~dLe~  169 (237)
T PF12241_consen   97 SEVTIEPATEEEIENTVKV--MGGEDWELWID-ALKEAG----VLAEGFKTVAYSYIGPELTWPIYRDGTIGKAKEDLEK  169 (237)
T ss_dssp             EEEEE----HHHHHHHHHH--HSSHHHHHHHH-HHHHCT-----EEEEEEEEEEEE---GGGCCCCTTCHHHHHHHHHHH
T ss_pred             EEEeeCCCCHHHHHhhccc--cCchHHHHHHH-HHHHCC----CccCCCEEEEEeccCcccChhhhcCCcHHHHHHHHHH
Confidence                123456777776554  44333222222 222221    000023334444433332  23344556999999999


Q ss_pred             HHHHHHHHhcCCC-CeEEEEeecCccc
Q 028508          138 ITRSLALEWGTDY-AIRVNGIAPGPIK  163 (208)
Q Consensus       138 ~~~~la~e~~~~~-gi~v~~v~pG~v~  163 (208)
                      -+..+..+|. +. |-...+|+...|.
T Consensus       170 ta~~i~~~L~-~~~G~A~vsV~KAlVT  195 (237)
T PF12241_consen  170 TAHAINEKLA-AIGGKAYVSVNKALVT  195 (237)
T ss_dssp             HHHHHHHHHH-TTT-EEEEEEE-----
T ss_pred             HHHHHHHHHH-hcCCcEEEEEehhhhh
Confidence            9999999997 54 4455677776663

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=91.20  E-value=0.25  Score=37.31  Aligned_cols=112  Identities=13%  Similarity=0.123  Sum_probs=69.6

Q ss_pred             EEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 028508           24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (208)
Q Consensus        24 ~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (208)
                      ++..|+.|...+++.+-.     .+||-+||-.+....     ..+.+.--..++|+.|..++++.+..+-+        
T Consensus        91 yIy~DILD~K~L~eIVVn-----~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~~kL--------  152 (366)
T KOG2774|consen   91 YIYLDILDQKSLEEIVVN-----KRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAKHKL--------  152 (366)
T ss_pred             chhhhhhccccHHHhhcc-----cccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHHcCe--------
Confidence            456788888877776532     389999987764332     12222334578999999999988865422        


Q ss_pred             CCCCceEEEeccccccccC------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe-ecCcc
Q 028508          104 SSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI-APGPI  162 (208)
Q Consensus       104 ~~~~~~iv~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v-~pG~v  162 (208)
                           ++..-|.++++.+.            .+...||.+|--.+-+-+.+...+    |+..-++ .||.+
T Consensus       153 -----~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF----g~dfr~~rfPg~i  215 (366)
T KOG2774|consen  153 -----KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF----GVDFRSMRFPGII  215 (366)
T ss_pred             -----eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc----CccceecccCccc
Confidence                 24333444554432            356779999987766666655444    4555444 35554

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=90.93  E-value=0.55  Score=36.81  Aligned_cols=52  Identities=17%  Similarity=0.084  Sum_probs=37.3

Q ss_pred             CCcH---HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 028508            2 GRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF   60 (208)
Q Consensus         2 ~R~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~   60 (208)
                      +|+.   ++++++.+++...+..+....+|+++.+++...++       ..|+||||.....
T Consensus       157 ~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-------~~DilINaTp~Gm  211 (289)
T PRK12548        157 NIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA-------SSDILVNATLVGM  211 (289)
T ss_pred             eCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-------cCCEEEEeCCCCC
Confidence            5765   77888888886655555667788887777665443       5699999997654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=89.64  E-value=1.1  Score=34.85  Aligned_cols=138  Identities=14%  Similarity=0.019  Sum_probs=83.6

Q ss_pred             CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------
Q 028508           48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------  120 (208)
Q Consensus        48 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------  120 (208)
                      .+|.++|-|....+..+..-+    -+++..|+.++...+..+...             +.+++..|+..-+.       
T Consensus        91 evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv-------------~aR~l~aSTseVYgdp~~hpq  153 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRV-------------GARFLLASTSEVYGDPLVHPQ  153 (350)
T ss_pred             HhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHh-------------CceEEEeecccccCCcccCCC
Confidence            578888888766553332222    356788999999888776432             45577777754332       


Q ss_pred             ---------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC--ChHHHHHhhh--------
Q 028508          121 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKAT--------  181 (208)
Q Consensus       121 ---------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~--------  181 (208)
                               +...++-|.-.|...+.|+....+    ..||.+...++--++.|.+.-..  .-..+.....        
T Consensus       154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k----~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~  229 (350)
T KOG1429|consen  154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHK----QEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVY  229 (350)
T ss_pred             ccccccccCcCCchhhhhHHHHHHHHHHHHhhc----ccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEE
Confidence                     234567799999988887776655    44687777777666666432211  1112222222        


Q ss_pred             -hhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          182 -DYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       182 -~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                       .....+.+....|+.+.++.|+.++
T Consensus       230 g~G~qtRSF~yvsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  230 GDGKQTRSFQYVSDLVEGLLRLMESD  255 (350)
T ss_pred             cCCcceEEEEeHHHHHHHHHHHhcCC
Confidence             2233344556778888888876543

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=89.46  E-value=1.4  Score=36.28  Aligned_cols=52  Identities=19%  Similarity=0.050  Sum_probs=36.0

Q ss_pred             HHHHHHHHHhcCCCeeE-------------EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC
Q 028508            8 LRSAVAALHSLGIPAIG-------------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV   62 (208)
Q Consensus         8 ~~~~~~~l~~~~~~~~~-------------~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~   62 (208)
                      -..+++++...|.++.+             ..+|+++.+++.+.+.   +.++++|++|+|||+....
T Consensus       217 G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        217 GYALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            34666777666665543             3467887777766654   5578999999999986543

>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]

Probab=87.71  E-value=5.5  Score=30.65  Aligned_cols=81  Identities=10%  Similarity=0.053  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 028508            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (208)
Q Consensus         8 ~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (208)
                      ..-+.+.|...|..+..+..=--+++.+.+.+....+   +.|+||.+-|..+  ...|+|.+.+-+.+...+.=.-...
T Consensus        23 a~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~---r~D~vI~tGGLGP--T~DDiT~e~vAka~g~~lv~~~~al   97 (255)
T COG1058          23 AAFLADELTELGVDLARITTVGDNPDRIVEALREASE---RADVVITTGGLGP--THDDLTAEAVAKALGRPLVLDEEAL   97 (255)
T ss_pred             HHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHh---CCCEEEECCCcCC--CccHhHHHHHHHHhCCCcccCHHHH
Confidence            4566788888888776655555577888887777665   6999999887654  4456777777777666554433333


Q ss_pred             HHHHHH
Q 028508           88 HEALKY   93 (208)
Q Consensus        88 ~~~~~~   93 (208)
                      +.+...
T Consensus        98 ~~i~~~  103 (255)
T COG1058          98 AMIEEK  103 (255)
T ss_pred             HHHHHH
Confidence            443333

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=86.84  E-value=3.5  Score=34.01  Aligned_cols=95  Identities=15%  Similarity=0.091  Sum_probs=52.9

Q ss_pred             ccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHH
Q 028508           49 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV  128 (208)
Q Consensus        49 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  128 (208)
                      ..+++-++|.-+... ...++      .++...|+.++..++.    ..+        -.++|++|++.+.........+
T Consensus       154 ~~~v~~~~ggrp~~e-d~~~p------~~VD~~g~knlvdA~~----~aG--------vk~~vlv~si~~~~~~~~~~~~  214 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEE-DIVTP------EKVDYEGTKNLVDACK----KAG--------VKRVVLVGSIGGTKFNQPPNIL  214 (411)
T ss_pred             ceeEEecccCCCCcc-cCCCc------ceecHHHHHHHHHHHH----HhC--------CceEEEEEeecCcccCCCchhh
Confidence            456666666544321 11222      2345567777777773    222        2459999999877665444444


Q ss_pred             HHhHHHHHHHHHHHH-HHhcCCCCeEEEEeecCcccCC
Q 028508          129 SAAKAAVDSITRSLA-LEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       129 ~~sKaa~~~~~~~la-~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                      ..  .+...-.+-.+ ..+. ..|+.-..|.||..+.+
T Consensus       215 ~~--~~~~~~~k~~~e~~~~-~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  215 LL--NGLVLKAKLKAEKFLQ-DSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hh--hhhhhHHHHhHHHHHH-hcCCCcEEEeccccccC
Confidence            42  11112222222 3334 66888999999988754

>PLN00106 malate dehydrogenase

Probab=86.80  E-value=4  Score=32.64  Aligned_cols=86  Identities=12%  Similarity=0.020  Sum_probs=55.9

Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc----cc
Q 028508           45 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH----YT  120 (208)
Q Consensus        45 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~----~~  120 (208)
                      .+...|++|+.||.....   .   ..+...+..|......+.+.+.    +...       .+.++++|....    ..
T Consensus        83 ~l~~aDiVVitAG~~~~~---g---~~R~dll~~N~~i~~~i~~~i~----~~~p-------~aivivvSNPvD~~~~i~  145 (323)
T PLN00106         83 ALKGADLVIIPAGVPRKP---G---MTRDDLFNINAGIVKTLCEAVA----KHCP-------NALVNIISNPVNSTVPIA  145 (323)
T ss_pred             HcCCCCEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHH----HHCC-------CeEEEEeCCCccccHHHH
Confidence            345899999999976531   1   2356677778776555555544    4331       466777777764    21


Q ss_pred             --------cCCchhHHHHhHHHHHHHHHHHHHHhc
Q 028508          121 --------ATWYQIHVSAAKAAVDSITRSLALEWG  147 (208)
Q Consensus       121 --------~~~~~~~y~~sKaa~~~~~~~la~e~~  147 (208)
                              +++....||.++.-...|-..++.++.
T Consensus       146 t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        146 AEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             HHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence                    356677788887666677777777764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=84.85  E-value=2.2  Score=34.95  Aligned_cols=48  Identities=21%  Similarity=0.268  Sum_probs=38.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~   59 (208)
                      +|+.++..++.+..   +.++.+.++|+.+.+.+.++++       ..|++|+++...
T Consensus        32 dRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~d~VIn~~p~~   79 (389)
T COG1748          32 DRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DFDLVINAAPPF   79 (389)
T ss_pred             eCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cCCEEEEeCCch
Confidence            67777777766654   3478999999999999998887       449999998753

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=83.83  E-value=15  Score=26.99  Aligned_cols=109  Identities=11%  Similarity=0.050  Sum_probs=63.6

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..++.|+-|++++.+.+.       +.|+||..-|.+.+..      +  ..+.+        ..+.++..+...+   
T Consensus        43 ~~i~q~Difd~~~~a~~l~-------g~DaVIsA~~~~~~~~------~--~~~~k--------~~~~li~~l~~ag---   96 (211)
T COG2910          43 VTILQKDIFDLTSLASDLA-------GHDAVISAFGAGASDN------D--ELHSK--------SIEALIEALKGAG---   96 (211)
T ss_pred             ceeecccccChhhhHhhhc-------CCceEEEeccCCCCCh------h--HHHHH--------HHHHHHHHHhhcC---
Confidence            4567889999888766554       8999999888654211      1  11111        1344444444434   


Q ss_pred             CCCCCCceEEEecccccccc----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508          102 ASSSSGGIIINISATLHYTA----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                           ..+++.++..++..-          .-+-..|..+++ +.-+...|+.    .+++...-++|.....|.
T Consensus        97 -----v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~-~ae~L~~Lr~----~~~l~WTfvSPaa~f~PG  161 (211)
T COG2910          97 -----VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALA-QAEFLDSLRA----EKSLDWTFVSPAAFFEPG  161 (211)
T ss_pred             -----CeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHH-HHHHHHHHhh----ccCcceEEeCcHHhcCCc
Confidence                 567888887765531          122223444443 3334455554    334788889998777663

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=83.06  E-value=1.2  Score=33.97  Aligned_cols=166  Identities=17%  Similarity=0.092  Sum_probs=89.3

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ++......+|++|...+..++..+     +++-+.|-|+....+--.++    -+-.-++...|++.++.++...-+..+
T Consensus        82 ~~~mkLHYgDmTDss~L~k~I~~i-----kPtEiYnLaAQSHVkvSFdl----peYTAeVdavGtLRlLdAi~~c~l~~~  152 (376)
T KOG1372|consen   82 GASMKLHYGDMTDSSCLIKLISTI-----KPTEVYNLAAQSHVKVSFDL----PEYTAEVDAVGTLRLLDAIRACRLTEK  152 (376)
T ss_pred             cceeEEeeccccchHHHHHHHhcc-----CchhhhhhhhhcceEEEeec----ccceeeccchhhhhHHHHHHhcCcccc
Confidence            456778899999999999999887     67777777776554321222    233445677788888877655433321


Q ss_pred             CCCCCCCCCceEEEecccccc------------ccCCchhHHHHhHHHHHHHHHHHHHH---hcCCCCeEEEEeecCccc
Q 028508           99 RGQASSSSGGIIINISATLHY------------TATWYQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~------------~~~~~~~~y~~sKaa~~~~~~~la~e---~~~~~gi~v~~v~pG~v~  163 (208)
                               -++- -.|+...            .|+-+.+.|+++|-+..=++-..+..   ++ -.||-.|.=+|--=.
T Consensus       153 ---------VrfY-QAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfA-cNGILFNHESPRRGe  221 (376)
T KOG1372|consen  153 ---------VRFY-QASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFA-CNGILFNHESPRRGE  221 (376)
T ss_pred             ---------eeEE-ecccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhccee-eccEeecCCCCcccc
Confidence                     1222 2222221            24556788999997643222222222   12 445555555552111


Q ss_pred             CCCccCCCChHHHHHh---------hhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          164 DTAGVSKLAPEEIRSK---------ATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +  +............         +.....++.++-+.|-.++++.++..+
T Consensus       222 n--FVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  222 N--FVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             c--hhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcC
Confidence            0  0000000000000         111123455778888888888777654

>cd00885 cinA Competence-damaged protein

Probab=82.62  E-value=15  Score=26.30  Aligned_cols=82  Identities=10%  Similarity=0.046  Sum_probs=55.1

Q ss_pred             HHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 028508           10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE   89 (208)
Q Consensus        10 ~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~   89 (208)
                      -+.+.+...|.++..+..--.|.+.+.+.++.+.+   +.|+||.+-| .++ ...|.+.+.+.+.+...+.+.-.+.+.
T Consensus        23 ~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~---~~dlVIttGG-~G~-t~~D~t~ea~~~~~~~~l~~~~e~~~~   97 (170)
T cd00885          23 FLAKELAELGIEVYRVTVVGDDEDRIAEALRRASE---RADLVITTGG-LGP-THDDLTREAVAKAFGRPLVLDEEALER   97 (170)
T ss_pred             HHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHh---CCCEEEECCC-CCC-CCCChHHHHHHHHhCCCcccCHHHHHH
Confidence            45556666777766554445567777777776654   6899998855 443 345788888888888877776666665


Q ss_pred             HHHHHHh
Q 028508           90 ALKYLKK   96 (208)
Q Consensus        90 ~~~~~~~   96 (208)
                      +..++..
T Consensus        98 i~~~~~~  104 (170)
T cd00885          98 IEARFAR  104 (170)
T ss_pred             HHHHHHh
Confidence            5555543

CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=81.15  E-value=4.5  Score=33.23  Aligned_cols=80  Identities=15%  Similarity=0.061  Sum_probs=45.6

Q ss_pred             HHHHHHHHhcCCCeeEE-------------EcCCCCHHHH-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCC--HHHH
Q 028508            9 RSAVAALHSLGIPAIGL-------------EGDVRKREDA-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNGF   72 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~-------------~~D~~~~~~~-~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~--~~~~   72 (208)
                      ..+++++...|.+++++             .+|+++.+++ +.++++.   ++.+|++|+|||+....+....+  .+..
T Consensus       215 ~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~  291 (390)
T TIGR00521       215 LALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKKQ  291 (390)
T ss_pred             HHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHHHhh---cccCCEEEEcccccccccccccccccccc
Confidence            45667777767655443             4677888887 5454332   46899999999987654432111  1111


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 028508           73 RTVIEIDSVGTFIMCHEAL   91 (208)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~   91 (208)
                      ...+..++..+-.++..+.
T Consensus       292 ~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       292 GEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             CCceeEEEEeCcHHHHHHH
Confidence            1223455555555555543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=80.89  E-value=14  Score=29.68  Aligned_cols=47  Identities=19%  Similarity=0.206  Sum_probs=33.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~   59 (208)
                      .|||..+++.+...|   |.++..+.+.+  +..++++.+       ..++|+|++|-.
T Consensus        36 AgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~VVlncvGPy   82 (382)
T COG3268          36 AGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQVVLNCVGPY   82 (382)
T ss_pred             ccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cceEEEeccccc
Confidence            479999999999888   55565565555  444444433       799999999943

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	208
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		3e-28
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		7e-27
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-17
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-17
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-17
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		3e-17
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-17
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-17
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-17
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		7e-17
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		1e-16
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		3e-16
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-15
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		3e-14
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		3e-13
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-11
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		2e-09
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		5e-09
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-09
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		5e-09
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-09
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-08
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-08
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-08
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-08
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-08
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-08
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-08
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-08
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-08
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-08
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		3e-08
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-08
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-07
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-07
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-07
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-07
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		1e-07
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-07
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-07
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-07
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-07
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		3e-07
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		6e-07
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		6e-07
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		6e-07
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		8e-07
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		8e-07
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-06
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-06
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-06
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-06
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-06
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-06
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		5e-06
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		5e-06
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		6e-06
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		8e-06
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-05
3f4b_A	323	Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-		1e-05
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-05
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-05
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-05
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		4e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		4e-05
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		4e-05
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-05
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		5e-05
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		5e-05
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-05
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		6e-05
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		6e-05
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		7e-05
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		7e-05
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		7e-05
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		8e-05
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-04
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		1e-04
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-04
2o50_A	315	The Crystal Structure Of Toxoplasma Gondii Enoyl Ac		1e-04
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-04
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		2e-04
2o2y_A	349	The Crystal Structure Of P. Falciparum Enoyl Acyl C		2e-04
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-04
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		2e-04
1vrw_A	336	Crystal Structure Analysis Of Plasmodium Falciparum		2e-04
3am3_A	329	A372m Mutant Of Enoyl-Acp Reductase From Plasmodium		2e-04
2ol4_A	338	Crystal Structure Of Plasmodium Falciparum Enoyl Ac		2e-04
2foi_A	269	Synthesis, Biological Activity, And X-Ray Crystal S		2e-04
1uh5_A	329	Crystal Structure Of Enoyl-Acp Reductase With Tricl		2e-04
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-04
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-04
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-04
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		2e-04
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-04
1nhg_A	229	Crystal Structure Analysis Of Plasmodium Falciparum		3e-04
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-04
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-04
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-04
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-04
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-04
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		4e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		4e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		4e-04
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		4e-04
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		4e-04
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-04
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-04
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		6e-04
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		6e-04
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		6e-04
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		7e-04

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 107/206 (51%), Gaps = 10/206 (4%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR K  L  A   +       + ++ DVR  +D  + +E     FG++DIL+N AAGNF+
Sbjct: 37  GRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFI 96
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYT 120
            PAEDLS NG+ +VI I   GTF  C +A+ KY                     AT  + 
Sbjct: 97  CPAEDLSVNGWNSVINIVLNGTF-YCSQAIGKYW-------IEKGIKGNIINXVATYAWD 148
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSK 179
           A    IH +AAKA V + T++LA+EWG  Y IRVN IAPGPI+ T G  KL   EE   +
Sbjct: 149 AGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEXAKR 208
Query: 180 ATDYMAAYKFGEKWDIAMAALYLASD 205
               +   + G   +IA  A YL SD
Sbjct: 209 TIQSVPLGRLGTPEEIAGLAYYLCSD 234

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score =  116 bits (291), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ GTF
Sbjct: 82  LSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTF 141
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
                    + +                  ATL       Q+H  +AKAAVD++TR LA+
Sbjct: 142 --------NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAV 193
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 203
           EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + LYLA
Sbjct: 194 EWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLA 252
Query: 204 S 204
           S
Sbjct: 253 S 253

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY                     +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYF--------VENDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T++LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTKTLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLAS 204
             GE  +IA  A +LAS
Sbjct: 217 YIGEPEEIAAVAAWLAS 233

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY                     +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYF--------VENDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTETLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLAS 204
             GE  +IA  A +LAS
Sbjct: 217 YIGEPEEIAAVAAWLAS 233

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY                     +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYF--------VENDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTETLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLAS 204
             GE  +IA  A +LAS
Sbjct: 217 YIGEPEEIAAVAAWLAS 233

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY                     +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYF--------VENDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTETLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLAS 204
             GE  +IA  A +LAS
Sbjct: 217 YIGEPEEIAAVAAWLAS 233

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G  AI ++GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ 
Sbjct: 64  GGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDT 123
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDS 137
           +  G F+   EA+KY  +                  +++H    W   +H +A+K  +  
Sbjct: 124 NLTGAFLGSREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKL 175
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LALE+     IRVN I PG +       K A    R+     +     G+  ++A 
Sbjct: 176 MTETLALEYAPK-GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAA 234
Query: 198 AALYLAS 204
            A +LAS
Sbjct: 235 VAAFLAS 241

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G  AI ++GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ 
Sbjct: 64  GGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDT 123
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDS 137
           +  G F+   EA+KY  +                  +++H    W   +H +A+K  +  
Sbjct: 124 NLTGAFLGSREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKL 175
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LALE+     IRVN I PG +       K A    R+     +     G+  ++A 
Sbjct: 176 MTETLALEYAPK-GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAA 234
Query: 198 AALYLAS 204
            A +LAS
Sbjct: 235 VAAFLAS 241

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G  AI ++GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ 
Sbjct: 64  GGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDT 123
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDS 137
           +  G F+   EA+KY  +                  +++H    W   +H +A+K  +  
Sbjct: 124 NLTGAFLGSREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKL 175
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LALE+     IRVN I PG +       K A    R+     +     G+  ++A 
Sbjct: 176 MTETLALEYAPK-GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAA 234
Query: 198 AALYLAS 204
            A +LAS
Sbjct: 235 VAAFLAS 241

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 3   RRKTVLRSAVAALHSLGIPA-----IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57
           R+   L+SA   L +   P      I ++ ++R  E+   +V+ST++ FGK++ LVN   
Sbjct: 50  RKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG 109
Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXAT 116
           G FL PAE +S  G+  V+E +  GTF MC      ++K+                  A 
Sbjct: 110 GQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLA- 168
Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 168
                    +H  AA+A V ++T+SLALEW     IR+N +APG I     V
Sbjct: 169 ---------VHSGAARAGVYNLTKSLALEWACS-GIRINCVAPGVIYSQTAV 210

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 3   RRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGNF+
Sbjct: 58  RKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFI 117
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YT 120
            P E LSPN ++T+ +I   GT  +  E  K L K                   T++  T
Sbjct: 118 SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK--------AQKGAAFLSITTIYAET 169
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSK 179
            + + +  ++AKA V+++++SLA EWG  Y +R N I PGPIK     S+L P      +
Sbjct: 170 GSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKE 228
Query: 180 ATDYMAAYKFGEKWDIAMAALYLASD 205
               +   + G   ++A  A +L SD
Sbjct: 229 MIGRIPCGRLGTVEELANLAAFLCSD 254

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 3   RRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGNF+
Sbjct: 58  RKXDVLKATAEQISSQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFI 117
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YT 120
            P E LSPN ++T+ +I   GT  +  E  K L K                   T++  T
Sbjct: 118 SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK--------AQKGAAFLSITTIYAET 169
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSK 179
            + + +  ++AKA V++ ++SLA EWG  Y  R N I PGPIK     S+L P      +
Sbjct: 170 GSGFVVPSASAKAGVEAXSKSLAAEWG-KYGXRFNVIQPGPIKTKGAFSRLDPTGTFEKE 228
Query: 180 ATDYMAAYKFGEKWDIAMAALYLASD 205
               +   + G   ++A  A +L SD
Sbjct: 229 XIGRIPCGRLGTVEELANLAAFLCSD 254

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G+  +    DV   E+  +++E+    FGKLD +VNAA  N   PAE+   + FR VIE+
Sbjct: 70  GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSI 138
           +  GT+ +C EA   L++                   T+   + +     +A+K  V S+
Sbjct: 130 NLFGTYYVCREAFSLLRE--SDNPSIINIGSLTVEEVTMPNISAY-----AASKGGVASL 182
Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAY----KFGEKW 193
           T++LA EWG  Y IRVN IAPG  +     +  + PE++     DYM       + G   
Sbjct: 183 TKALAKEWGR-YGIRVNVIAPGWYRTKMTEAVFSDPEKL-----DYMLKRIPLGRTGVPE 236
Query: 194 DIAMAALYLASD 205
           D+   A++LAS+
Sbjct: 237 DLKGVAVFLASE 248

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 19/186 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFI 85
           DV + +D   +V  TI  FG+LD +VN A G+   P   E+ S  GFR ++E++ +GT+ 
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLDCVVNNA-GHHPPPQRPEETSAQGFRQLLELNLLGTYT 120
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
           +   AL YL+K                    + Y AT         K AV ++T++LAL+
Sbjct: 121 LTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVAT---------KGAVTAMTKALALD 171
Query: 146 WGTDYAIRVNGIAPGPIKDT--AGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAAL 200
             + Y +RVN I+PG I       ++ L P+  R+   + M A    + G+  ++  AA+
Sbjct: 172 E-SPYGVRVNCISPGNIWTPLWEELAALMPDP-RASIREGMLAQPLGRMGQPAEVGAAAV 229
Query: 201 YLASDA 206
           +LAS+A
Sbjct: 230 FLASEA 235

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
           AA+   G  AIGLE +V   +    V+++ ++ FGK+ +LVN A G    P  D+  + F
Sbjct: 54  AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDF 112
Query: 73  RTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAK 132
               +++    F +   A  +++K                    +   A++      ++K
Sbjct: 113 EWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM---ASY-----GSSK 164
Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 192
           AAV+ +TR++A + G    IRVN IAPG IK  A  + L P EI      +    + GE 
Sbjct: 165 AAVNHLTRNIAFDVGP-MGIRVNAIAPGAIKTDALATVLTP-EIERAMLKHTPLGRLGEA 222
Query: 193 WDIAMAALYLASDA 206
            DIA AAL+L S A
Sbjct: 223 QDIANAALFLCSPA 236

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLS 68
           V  +  LG  AI +  DV   ED   +V+ T++ FG++DILVN A     N L+    + 
Sbjct: 46  VDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMR---MK 102
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
              + TVI  +  G F+      +++ +                  + +  T    Q + 
Sbjct: 103 EEEWDTVINTNLKGVFLCTKAVSRFMMR--------QRHGRIVNIASVVGVTGNPGQANY 154
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
            AAKA V  +T++ A E  +   I VN IAPG I     ++ +  E I+++    + A +
Sbjct: 155 VAAKAGVIGLTKTSAKELAS-RNITVNAIAPGFI--ATDMTDVLDENIKAEMLKLIPAAQ 211
Query: 189 FGEKWDIAMAALYLASD 205
           FGE  DIA A  + ASD
Sbjct: 212 FGEAQDIANAVTFFASD 228

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GRRK VL +A+A    +G  A+G++ D     +  R+ E      G++D+L   A G   
Sbjct: 60  GRRKDVLDAAIA---EIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSX 116
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
           +P  +++   +    + +  G      +AL  L +                  +T   T 
Sbjct: 117 LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR----------GSSVVLTGSTAGSTG 166
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA- 180
           T      +A+KAA+ S  R+  L+   D  IR+N ++PGP + T  V     + ++ +  
Sbjct: 167 TPAFSVYAASKAALRSFARNWILDL-KDRGIRINTLSPGPTETTGLVELAGKDPVQQQGL 225
Query: 181 TDYMAAY----KFGEKWDIAMAALYLASD 205
            + +AA     + G   ++A AAL+LASD
Sbjct: 226 LNALAAQVPXGRVGRAEEVAAAALFLASD 254

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 25/193 (12%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL---SPNGFRTV 75
           G+  + L GD+   +    +V+ T+   G L+ILVN  A  +  P + L   +       
Sbjct: 96  GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQY--PQQGLEYITAEQLEKT 153
Query: 76  IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAV 135
             I+    F +   AL +LK+                  + + Y      I  SA K A+
Sbjct: 154 FRINIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAI 203
Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGE 191
            + TRSL+        IRVNG+APGPI      + L P     K      +     + G+
Sbjct: 204 VAFTRSLSQSL-VQKGIRVNGVAPGPI-----WTPLIPSSFDEKKVSQFGSNVPMQRPGQ 257
Query: 192 KWDIAMAALYLAS 204
            +++A A +YLAS
Sbjct: 258 PYELAPAYVYLAS 270

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +        +D++P  
Sbjct: 71  VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  I++ G F +  EA K+L+                    T    A       S +
Sbjct: 131 FDRVFTINTRGQFFVAREAYKHLE---------IGGRLILMGSITGQAKAVPKHAVYSGS 181
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---AGVSKLAP--EEIRSKATDYMAA 186
           K A+++  R +A++   D  I VN +APG IK     A   +  P  E + ++  D  AA
Sbjct: 182 KGAIETFARCMAIDM-ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA 240
Query: 187 YKF------GEKWDIAMAALYLASD 205
            ++      G   DIA    +LAS+
Sbjct: 241 VQWSPLRRVGLPIDIARVVCFLASN 265

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 21/191 (10%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIE 77
           G+  + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++         
Sbjct: 96  GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155
Query: 78  IDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDS 137
           I+    F +   AL +LK+                  + + Y      I  SA K A+ +
Sbjct: 156 INIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAIVA 205
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGEKW 193
            TRSL+        IRVNG+APGPI      + L P     K      +     + G+ +
Sbjct: 206 FTRSLSQSL-VQKGIRVNGVAPGPI-----WTPLIPSSFDEKKVSQFGSNVPXQRPGQPY 259
Query: 194 DIAMAALYLAS 204
           ++A A +YLAS
Sbjct: 260 ELAPAYVYLAS 270

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +        +D++P  
Sbjct: 71  VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  I++ G F +  EA K+L+                    T    A       S +
Sbjct: 131 FDRVFTINTRGQFFVAREAYKHLE---------IGGRLILMGSITGQAKAVPKHAVYSGS 181
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---AGVSKLAP--EEIRSKATDYMAA 186
           K A+++  R +A++   D  I VN +APG IK     A   +  P  E + ++  D  AA
Sbjct: 182 KGAIETFARCMAIDM-ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA 240
Query: 187 YKF------GEKWDIAMAALYLASD 205
            ++      G   DIA    +LAS+
Sbjct: 241 VQWSPLRRVGLPIDIARVVCFLASN 265

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL 61
           R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A     
Sbjct: 40  RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY 99
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
             A+D +   +  ++ I+    + +   A  +LK                         A
Sbjct: 100 KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--------A 151
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT-AGVSKLAPE--EIRS 178
             Y+    A K A+D +TR LA EW  D  IRVNG+ PG I  +   ++   PE  E  +
Sbjct: 152 VPYEAVYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVIATSLVEMTIQDPEQKENLN 210
Query: 179 KATDYMAAYKFGEKWDIAMAALYLA 203
           K  D  A  + GE  ++A    +L 
Sbjct: 211 KLIDRCALRRMGEPKELAAMVAFLC 235

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL 61
           R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A     
Sbjct: 41  RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY 100
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
             A+D +   +  ++ I+    + +   A  +LK                         A
Sbjct: 101 KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--------A 152
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT-AGVSKLAPE--EIRS 178
             Y+    A K A+D +TR LA EW  D  IRVNG+ PG I  +   ++   PE  E  +
Sbjct: 153 VPYEAVYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVIATSLVEMTIQDPEQKENLN 211
Query: 179 KATDYMAAYKFGEKWDIAMAALYLA 203
           K  D  A  + GE  ++A    +L 
Sbjct: 212 KLIDRCALRRMGEPKELAAMVAFLC 236

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA---GNF--LVPAEDLSPNGFRTVIEIDSVG 82
           DV       R     + H G+LD +V+ A     NF    P ED     +  V+ ++  G
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLED-----WELVLRVNLTG 111
Query: 83  TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 142
           +F++   A +  ++                  A+  Y     Q + +A+ A V  +TR+L
Sbjct: 112 SFLVAKAASEAXREKNPGSIVLT---------ASRVYLGNLGQANYAASXAGVVGLTRTL 162
Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 202
           ALE G  + IRVN +APG I +T   +K+ PE++R KA       + G+  ++A AAL+L
Sbjct: 163 ALELGR-WGIRVNTLAPGFI-ETRXTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFL 219
Query: 203 ASD 205
            SD
Sbjct: 220 LSD 222

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI-NHFGKLDILVNAAAGNFLV 62
            + ++   +AA  + GI A G   DV   ED ++ + + I +  G +DILVN A     V
Sbjct: 67  NQELVDRGMAAYKAAGINAHGYVCDVTD-EDGIQAMVAQIESEVGIIDILVNNAGIIRRV 125
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
           P  +++   FR VI+ID    FI+    +  + K                   T+   A 
Sbjct: 126 PMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA- 184
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKA 180
                  AAK  +  +T+++A E+G +  I+ NGI PG I    TA + +L  +  R   
Sbjct: 185 -------AAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQKDGSRHPF 236
Query: 181 TDYM----AAYKFGEKWDIAMAALYLASDA 206
             ++     A ++GE  D+   A++LASDA
Sbjct: 237 DQFIIAKTPAARWGEAEDLMGPAVFLASDA 266

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ + +LG  AI ++ D+R+  + V++ +  + HFG LDI V+ +        +D++   
Sbjct: 60  VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE 119
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  +++ G F +  EA ++L +                   +  ++   + ++ S +
Sbjct: 120 FDRVFSLNTRGQFFVAREAYRHLTE--------GGRIVLTSSNTSKDFSVPKHSLY-SGS 170
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPG 160
           K AVDS  R  + + G D  I VN +APG
Sbjct: 171 KGAVDSFVRIFSKDCG-DKKITVNAVAPG 198

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV   E    ++  T+   G+LD+LVN A      P  D++   +  V+ +         
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT 140
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             AL+Y +                   + L + A   Q H +AAKA V ++TR  A+E  
Sbjct: 141 RAALRYFRG-------VDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE-A 192
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
            ++ +R+N ++P  I     + K +  E+  +     A  +  E W++A    +LASD
Sbjct: 193 VEFGVRINAVSP-SIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASD 249

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN 59
           +GR +T +      +   G  AI LE DV         V   +  FG LDI+V NA    
Sbjct: 58  LGRTRTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGING 117
Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHY 119
              P +DL P  +   I ++  GTF+  H  + YLK+                   T  +
Sbjct: 118 VWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ-----RGGGAIVVVSSINGTRTF 172
Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEE 175
           T      + +   A V +I + LALE G  + IRVN + PG I+ + +  +KL  EE
Sbjct: 173 TTPGATAYTATKAAQV-AIVQQLALELGKHH-IRVNAVCPGAIETNISDNTKLRHEE 227

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 39  VESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKX 97
           V +T   FG++D    NA       P E  +   F  V+ I+  G F+   + LK +++ 
Sbjct: 83  VTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ 142
Query: 98  XXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                                      Q   +AAK  V  +TR+ A+E+G  Y IR+N I
Sbjct: 143 GSGMVVNTASVGGIRGIGN--------QSGYAAAKHGVVGLTRNSAVEYGR-YGIRINAI 193
Query: 158 APG----PIKDTAGVSKLAPEEIRSKATDYMA---AYKFGEKWDIAMAALYLASD 205
           APG    P+ + + + +L PE  R  A +++    + ++GE  +IA    +L SD
Sbjct: 194 APGAIWTPMVENS-MKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSD 247

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  +  LG  A     D+   ++   + +  I+  GK+DILVN A G    P  D+    
Sbjct: 52  VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMAD 110
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           FR   E++    F +       ++K                    +   A+        +
Sbjct: 111 FRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS--------S 162
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KAA   + R++A + G +  IRVNGIAPG I   A  S + P EI  K   +    + G+
Sbjct: 163 KAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTPIRRLGQ 220
Query: 192 KWDIAMAALYLASDA 206
             DIA AAL+L S A
Sbjct: 221 PQDIANAALFLCSPA 235

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 29/208 (13%)
Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAE 65
           +AV   + +G  A G+  DV   +DA   VE T   +G++D+LVN A     GN +   E
Sbjct: 63  AAVRVANEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPE 122
Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWY- 124
           +     +  +  ++  G F+     +   ++                   T  YTAT   
Sbjct: 123 ET----WDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIIN-----------TTSYTATSAI 167
Query: 125 --QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIR 177
             +    A+K A+ S+TR+ A +   +  IRVN +APG I D+   +K+      P ++R
Sbjct: 168 ADRTAYVASKGAISSLTRAXAXDHAKE-GIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLR 225
Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASD 205
           S         + G   +IA A L+LASD
Sbjct: 226 SDFNARAVXDRXGTAEEIAEAXLFLASD 253

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ + +LG  AI ++ D+R+  + V++ +  + HFG LDI V+ +        +D++   
Sbjct: 60  VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE 119
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  +++ G F +  EA ++L +                   +  ++   + +  S +
Sbjct: 120 FDRVFSLNTRGQFFVAREAYRHLTE--------GGRIVLTSSNTSKDFSVPKHSL-FSGS 170
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPG 160
           K AVDS  R  + + G D  I VN +APG
Sbjct: 171 KGAVDSFVRIFSKDCG-DKKITVNAVAPG 198

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 24  GLEGD--VRKREDAVRV---VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           GLEG   V    DA  V   VEST+  FG L++LVN A       A  +  + +  VI+ 
Sbjct: 76  GLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDT 135
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSI 138
           +    F +    L+ + K                  + +       Q++ +AAKA V  +
Sbjct: 136 NLKAVFRLSRAVLRPMMK--------ARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGM 187
Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 198
           TR+LA E G+   I VN +APG I DT  ++K  P+E ++     +   + G   DIA A
Sbjct: 188 TRALAREIGS-RGITVNCVAPGFI-DTD-MTKGLPQEQQTALKTQIPLGRLGSPEDIAHA 244
Query: 199 ALYLAS 204
             +LAS
Sbjct: 245 VAFLAS 250

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA-GNFLVPAED 66
           L   V  L  +G   +G++ DV K++D    V  T   + ++D+L N A   + + P  +
Sbjct: 44  LNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAE 103
Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALK-YLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ 125
           +S   +  V+ ++    F      +   LK+                  A   YT     
Sbjct: 104 VSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTV---- 159
Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYM 184
                AK  +  +TRS+A  +G D  IR   + PG +K   G+    P E+  +  T  M
Sbjct: 160 -----AKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM 213
Query: 185 A-AYKFGEKWDIAMAALYLASD 205
           + + +  E  DIA   ++LASD
Sbjct: 214 SLSSRLAEPEDIANVIVFLASD 235

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 19/209 (9%)
Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--- 57
           + R +    S V  + S G  + G  GDV K+E+   V+   +     +DILVN A    
Sbjct: 74  ISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITR 133
Query: 58  -GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXAT 116
              FL    D   +  RT +             +L Y+ +                  + 
Sbjct: 134 DNLFLRMKNDEWEDVLRTNL------------NSLFYITQPISKRMINNRYGRIINISSI 181
Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
           +  T    Q + S++KA V   T+SLA E  +   I VN IAPG I  ++ ++    E+I
Sbjct: 182 VGLTGNVGQANYSSSKAGVIGFTKSLAKELAS-RNITVNAIAPGFI--SSDMTDKISEQI 238
Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASD 205
           +      + A + G   ++A  A +L+SD
Sbjct: 239 KKNIISNIPAGRMGTPEEVANLACFLSSD 267

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---PNGFRTVIEIDSVGTF 84
           D+    + VR VE      G++D+LVN AA     P   L+   P  +R V+E++     
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAA--IAAPGSALTVRLPE-WRRVLEVNLTAPM 113
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +   A + ++K                  +     A       +A+K  + ++TRSLAL
Sbjct: 114 HLSALAAREMRKVGGGAIVNVA--------SVQGLFAEQENAAYNASKGGLVNLTRSLAL 165
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           +      IRVN +APG I   A +  +A    PE  R    D  A  + G+  ++A A L
Sbjct: 166 DL-APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL 224
Query: 201 YLASD 205
           +LAS+
Sbjct: 225 FLASE 229

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           G         VA L  LG   + ++ D+ K  + V + +  ++HFG LD +++ +     
Sbjct: 53  GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW 112
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
               +++   F  V  +++ G F +  + LK+ ++                  +++    
Sbjct: 113 CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-----------GGRIILTSSIAAVM 161
Query: 122 TWYQIHV--SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
           T    H   + +KAAV+   R+ A++ G    + VN IAPG +K
Sbjct: 162 TGIPNHALYAGSKAAVEGFCRAFAVDCGAK-GVTVNCIAPGGVK 204

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA+ +LG   + ++ DV +  D     +  I+ FG+ DILVN A    L+P ++L+  
Sbjct: 45  AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 104
Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI---- 126
            ++   EI+    F+M    +  +K+                    L  T  W +I    
Sbjct: 105 QWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII------------NLTSTTYWLKIEAYT 152
Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
           H  + KAA    TR+LA + G D  I VN IAP  ++ TA     A   +     + + A
Sbjct: 153 HYISTKAANIGFTRALASDLGKD-GITVNAIAPSLVR-TATTEASALSAMFDVLPNMLQA 210
Query: 187 Y-KFGEKWDIAMAALYLASD 205
             +     D+  AA +LASD
Sbjct: 211 IPRLQVPLDLTGAAAFLASD 230

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G+ A G+E ++   E   +  E   N    +DILVN A          +S   +  V+++
Sbjct: 56  GVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKV 115
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSI 138
           +  GTF++   +L+ + K                  + + +T    Q++ S  KA +   
Sbjct: 116 NLTGTFLVTQNSLRKMIK--------QRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGF 167
Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 198
           T+SLA E      + VN +APG I+    ++ +  EEI+ K  + +   +FG   ++A  
Sbjct: 168 TKSLAKELAPRNVL-VNAVAPGFIETD--MTAVLSEEIKQKYKEQIPLGRFGSPEEVANV 224
Query: 199 ALYLASD 205
            L+L S+
Sbjct: 225 VLFLCSE 231

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 73/175 (41%), Gaps = 14/175 (8%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96
            ++ +T+  FGKLDILVN A     +P +  S  G    IE       +     +   KK
Sbjct: 75  EILSTTLGKFGKLDILVNNAGA--AIP-DSQSKTGTAQSIESYDATLNLNLRSVIALTKK 131
Query: 97  XXXXXXXXXXXXXXXXXXAT-LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155
                             A+ LH T  +   + S AKAA+D  TR+ A++    + IRVN
Sbjct: 132 AVPHLSSTKGEIVNISSIASGLHATPDFP--YYSIAKAAIDQYTRNTAIDL-IQHGIRVN 188
Query: 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMAALYLA 203
            I+PG +    G +   PEE   K    MA  K        G+  DIA    +LA
Sbjct: 189 SISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 243

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 27  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTF- 84
           GD+ K E A R+V   I  FG++D LVN A G FL  P  + +   +   + ++  G F 
Sbjct: 75  GDISKPETADRIVREGIERFGRIDSLVNNA-GVFLAKPFVEXTQEDYDHNLGVNVAGFFH 133
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           I    A + LK+                        A       S  K  ++++TRSLA 
Sbjct: 134 ITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALA-------SLTKGGLNAVTRSLAX 186
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 202
           E+ +   +RVN ++PG IK     +   P E  S         + GE  D+  A LYL
Sbjct: 187 EF-SRSGVRVNAVSPGVIK-----TPXHPAETHSTLAGLHPVGRXGEIRDVVDAVLYL 238

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 23/181 (12%)
Query: 33  EDAVR-VVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           E +VR +++ TI+ FG+LDI+ N AA     + LV    ++ + +     +++ GT +MC
Sbjct: 69  EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLV--TQMTVDVWDDTFTVNARGTMLMC 126
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT---ATWYQIHVSAAKAAVDSITRSLAL 144
             A+  L                    AT H     +T Y    +  KAA++++TR +A 
Sbjct: 127 KYAIPRL-------ISAGGGAIVNISSATAHAAYDMSTAY----ACTKAAIETLTRYVAT 175
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           ++G  + +R N IAPG ++ T  +    P+ I      +  A + GE  +IA    +LAS
Sbjct: 176 QYGR-HGVRCNAIAPGLVR-TPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLAS 233
Query: 205 D 205
           D
Sbjct: 234 D 234

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 16/186 (8%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D R  +   +VV+  +   G+LDI+V  A        +D++P  FR V++I+  GT+   
Sbjct: 81  DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTV 140
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
                 + +                           + IH +A+K AV  + R+ A E G
Sbjct: 141 MAGAPRIIEGGRGGSIILISSAAGMKMQP-------FMIHYTASKHAVTGLARAFAAELG 193
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKW-----DIAMAA 199
             ++IRVN + PGP+    G   +     ++  T+   ++    F   W     DIA   
Sbjct: 194 K-HSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTV 252
Query: 200 LYLASD 205
            +LASD
Sbjct: 253 CWLASD 258

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 7/194 (3%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA-GNFLVPAEDLSPN 70
           VAA+   G  A+ + GDV    D      +    FG+LD LVN A   ++    ++ S  
Sbjct: 68  VAAITESGGEAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVE 127
Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSA 130
                + ++  G+ +   EA++   +                  A +  +AT Y +  +A
Sbjct: 128 RIERXLRVNVTGSILCAAEAVRRXSR---LYSGQGGAIVNVSSXAAILGSATQY-VDYAA 183
Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KAA+D+ T  LA E   +  IRVN + PG I+     S   P+  R  A   +   + G
Sbjct: 184 SKAAIDTFTIGLAREVAAE-GIRVNAVRPGIIETDLHASGGLPDRAREXAPS-VPXQRAG 241
Query: 191 EKWDIAMAALYLAS 204
              ++A A LYL S
Sbjct: 242 XPEEVADAILYLLS 255

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG--FRTVIEIDSVGTFI 85
           DV K ED   +V++TI   GKLDI+          P   L      F+ V++I+  G F+
Sbjct: 72  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV-SAAKAAVDSITRSLAL 144
           +   A + +                        +TA     HV +A K AV  +T SL  
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISS--------FTAGEGVSHVYTATKHAVLGLTTSLCT 183
Query: 145 EWGTDYAIRVNGIAP----GP-IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           E G +Y IRVN ++P     P + D  GV     EE+  +A +        E  D+A A 
Sbjct: 184 ELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE--DVADAV 240
Query: 200 LYLASD 205
            YLA D
Sbjct: 241 AYLAGD 246

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 18/191 (9%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTV 75
           G  AI +  DV   E A  + + T+  FG +D LVN AA   G  L     + P  ++  
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF 116
Query: 76  IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAA 134
           + ++  G         K + K                       TA W Y  +   AK  
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSS------------TAAWLYSNYYGLAKVG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           ++ +T+ L+ E G    IR+N IAPGPI DT       P+E+       +   + G   D
Sbjct: 165 INGLTQQLSRELG-GRNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLPLSRMGTPDD 222
Query: 195 IAMAALYLASD 205
           +    L+L SD
Sbjct: 223 LVGMCLFLLSD 233

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 11/200 (5%)
Query: 6   TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE 65
           T L +      + GI  +  +GDV+  ED   +V++ ++ FG++DILVN A         
Sbjct: 41  TSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLML 100
Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ 125
            +S   +  V+  +    ++      K + K                  A         Q
Sbjct: 101 KMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG--------Q 152
Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
            + +A+KA +   T+S+A E+     I  N +APG IK    ++ + P++++    + + 
Sbjct: 153 ANYAASKAGLIGFTKSIAKEFAAK-GIYCNAVAPGIIK--TDMTDVLPDKVKEMYLNNIP 209
Query: 186 AYKFGEKWDIAMAALYLASD 205
             +FG   ++A    +LASD
Sbjct: 210 LKRFGTPEEVANVVGFLASD 229

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXX 98
           V++ +  FG L +LVN A    +   ED +   ++ +++++  G F+     +K +K+  
Sbjct: 72  VDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG 131
Query: 99  XXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                              H YTAT         K AV  +T+S ALE G    IRVN I
Sbjct: 132 RGSIINISSIEGLAGTVACHGYTAT---------KFAVRGLTKSTALELGPS-GIRVNSI 181
Query: 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
            PG +K    ++   PE+I   A    A     E  +++   +YLASD
Sbjct: 182 HPGLVKTP--MTDWVPEDIFQTALGRAA-----EPVEVSNLVVYLASD 222

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA-GNFLVPAEDLSPNGFRTVI 76
           +G  A+ +  D+ K  D    VE+ ++ FGK+DILVN A  G+    AE + P  F  ++
Sbjct: 53  IGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIV 112
Query: 77  EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 136
            ++  G ++M  + + + K+                          WY    +A K  V 
Sbjct: 113 GVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWY----NATKGWVV 168
Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKF 189
           S+T++LA+E      IRV  + P      AG + L         EEIR K  D +   + 
Sbjct: 169 SVTKALAIEL-APAKIRVVALNP-----VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRL 222
Query: 190 GEKWDIAMAALYLAS 204
            +  D+A AA +L S
Sbjct: 223 LKPDDLAEAAAFLCS 237

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 10/190 (5%)
Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76
           + GI A   +  V   E   ++V+  +  FG++D  +  A         D S   +  V+
Sbjct: 70  TYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVV 129
Query: 77  EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 136
           ++D  GTF  C +A+ +  K                  A      T Y +    AKA   
Sbjct: 130 QVDLNGTF-HCAKAVGHHFK-ERGTGSLVITASMSGHIANFPQEQTSYNV----AKAGCI 183
Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
            + RSLA EW  D+A RVN I+PG I DT G+S   P+E +      +   + G   ++ 
Sbjct: 184 HMARSLANEW-RDFA-RVNSISPGYI-DT-GLSDFVPKETQQLWHSMIPMGRDGLAKELK 239
Query: 197 MAALYLASDA 206
            A +Y ASDA
Sbjct: 240 GAYVYFASDA 249

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 20/209 (9%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++ VA L + G     +E DV KR      ++  I+  G  D+L   A  + + PA D++
Sbjct: 50  QAVVAGLENGGF---AVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDIT 106
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
              +    ++++ G F+    A ++                     A L         H 
Sbjct: 107 DEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLA-------HY 159
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---------AGVSKLAPEEIRSK 179
           SA+K AV   T++LA E      IRVN + PG +K           A +  + PE +R++
Sbjct: 160 SASKFAVFGWTQALAREMAPKN-IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAE 218
Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAVQ 208
                   +  E  D+A   ++LASDA +
Sbjct: 219 YVSLTPLGRIEEPEDVADVVVFLASDAAR 247

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXX 98
           V++ +  FG L +LVN A    +   ED +   ++ +++++  G F+     +K  K+  
Sbjct: 72  VDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPXKEAG 131
Query: 99  XXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                              H YTAT         K AV  +T+S ALE G    IRVN I
Sbjct: 132 RGSIINISSIEGLAGTVACHGYTAT---------KFAVRGLTKSTALELGPS-GIRVNSI 181
Query: 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
            PG +K     +   PE+I   A    A     E  +++   +YLASD
Sbjct: 182 HPGLVKTPX--TDWVPEDIFQTALGRAA-----EPVEVSNLVVYLASD 222

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 25/211 (11%)
Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN---- 59
           R+ +L+S V+      + A     DV   +   +++ ST+  FGK+D+LVN A       
Sbjct: 47  RQIILKSGVSEKQVNSVVA-----DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDA 101
Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHY 119
           F     D   + +   ++++      M  +   +L                        Y
Sbjct: 102 FGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY 161
Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
            A         AKAA+D  TRS A++    + IRVN ++PG ++     +   P++   K
Sbjct: 162 YAI--------AKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQK 212
Query: 180 ATDYMAAYK-------FGEKWDIAMAALYLA 203
             ++MA++K        G+   IA   L+LA
Sbjct: 213 FYNFMASHKECIPIGAAGKPEHIANIILFLA 243

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLS 68
           V  + + G+ +  ++ +V   ++   +++  ++ FG LD+LVN A     N L+    + 
Sbjct: 52  VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMR---MK 108
Query: 69  PNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH 127
              +  VI+ +  G F    +A  + L++                     +Y AT     
Sbjct: 109 EQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVAT----- 163
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
               KA V  +T+S A E  +   I VN +APG I   + ++    +E++ +    +   
Sbjct: 164 ----KAGVIGLTKSAARELAS-RGITVNAVAPGFI--VSDMTDALSDELKEQMLTQIPLA 216
Query: 188 KFGEKWDIAMAALYLASD 205
           +FG+  DIA    +LASD
Sbjct: 217 RFGQDTDIANTVAFLASD 234

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 7/190 (3%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77
            G+     + DV   +   + ++      G +  L+  A  + + PA +L+   F  V +
Sbjct: 62  FGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYD 121
Query: 78  IDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDS 137
           ++  G F  C    K   +                         +  Q+  +++KAA  +
Sbjct: 122 VNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSN 181
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIK--DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
           + + LA EW +   IRVN ++PG +    TA + K    +IR      +   +F +  ++
Sbjct: 182 LVKGLAAEWAS-AGIRVNALSPGYVNTDQTAHMDK----KIRDHQASNIPLNRFAQPEEM 236
Query: 196 AMAALYLASD 205
              A+ L SD
Sbjct: 237 TGQAILLLSD 246

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 76/187 (40%), Gaps = 29/187 (15%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           DV   ED  RVV      FG +D LVN A    G FL   E  S   FR V+EI+  G F
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVF 115
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           I     +  +K                     L  T+++      A+K  V  +++  A+
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSY-----GASKWGVRGLSKLAAV 167
Query: 145 EWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMA 198
           E GTD  IRVN + PG    P+    G        IR    +Y      + GE  +IA A
Sbjct: 168 ELGTDR-IRVNSVHPGMTYTPMTAETG--------IRQGEGNYPNTPMGRVGEPGEIAGA 218
Query: 199 ALYLASD 205
            + L SD
Sbjct: 219 VVKLLSD 225

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 12/194 (6%)
Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNG 71
           A +   G  A+ L GD+     A  +V       G LDIL   A     +P  +DL+   
Sbjct: 93  ALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQ 152
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F+    ++    F +  EA+  L K                      Y  + + +  +A 
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA----------YQPSPHLLDYAAT 202
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KAA+ + +R LA +   +  IRVN +APGPI     +S    ++   +        + G+
Sbjct: 203 KAAILNYSRGLAKQV-AEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQ 261
Query: 192 KWDIAMAALYLASD 205
             ++A   +YLAS 
Sbjct: 262 PAELAPVYVYLASQ 275

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 10/204 (4%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
           R++  +  AVA L   G+   G    V K ED  R+V + +   G +DILV NAA   F 
Sbjct: 47  RKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFF 106
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
               D++   +   ++I+     +M    +  ++K                  A    + 
Sbjct: 107 GSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEK------RGGGSVVIVSSIAAFSPSP 160
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
            +   +VS  K A+  +T++LA+E      IRVN +APG IK +        +E      
Sbjct: 161 GFSPYNVS--KTALLGLTKTLAIELAP-RNIRVNCLAPGLIKTSFSRMLWMDKEKEESMK 217
Query: 182 DYMAAYKFGEKWDIAMAALYLASD 205
           + +   + GE  D A    +L S+
Sbjct: 218 ETLRIRRLGEPEDCAGIVSFLCSE 241

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 19/198 (9%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLS 68
           V  + + G+ +  ++ +V   ++    ++  ++ FG LD+LVN A     N L   ++  
Sbjct: 46  VEEIKAKGVDSFAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQE 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH 127
              +  VI+ +  G F    +A  + L++                     +Y AT     
Sbjct: 106 ---WDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVAT----- 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
               KA V  +T+S A E  +   I VN +APG I   +  +    +E++ +    +   
Sbjct: 158 ----KAGVIGLTKSAARELAS-RGITVNAVAPGFI--VSDXTDALSDELKEQXLTQIPLA 210
Query: 188 KFGEKWDIAMAALYLASD 205
           +FG+  DIA    +LASD
Sbjct: 211 RFGQDTDIANTVAFLASD 228

>pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-Carrier- Protein Reductase With Triclosan Length = 323

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 44  NHFGKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXX 101
           N +GK+ +LV++ A    V     D S +G+   I   S     +C    K++       
Sbjct: 116 NKYGKISMLVHSLANGREVQKSLLDTSRDGYLDAISKSSYSLISLCKHFCKFMN------ 169
Query: 102 XXXXXXXXXXXXXATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156
                         +L Y A+      Y   +S+AKAA++S TR LA   G  Y IR+N 
Sbjct: 170 --------SGGSVVSLTYQASQKVVPGYGGGMSSAKAALESDTRVLAYYLGRKYNIRINT 221
Query: 157 IAPGPIKDTA 166
           I+ GP+K  A
Sbjct: 222 ISAGPLKSRA 231

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 39/195 (20%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTFI 85
           DV    D   V+ +     G L++LVN A    L+P   E      F  +++I++   FI
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAG--ILLPGDMETGRLEDFSRLLKINTESVFI 117
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH----VSAAKAAVDSITRS 141
            C + +  +K+                    +   ++W  I      SA+KAAV ++TR+
Sbjct: 118 GCQQGIAAMKETGGSII-------------NMASVSSWLPIEQYAGYSASKAAVSALTRA 164
Query: 142 LALEW-GTDYAIRVNGIAPG----PIKDTA---GVSK---LAPEEIRSKATDYMAAYKFG 190
            AL      YAIRVN I P     P+   +   GVSK   L   ++      YM      
Sbjct: 165 AALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPER--- 221
Query: 191 EKWDIAMAALYLASD 205
               IA   L+LASD
Sbjct: 222 ----IAQLVLFLASD 232

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 7/195 (3%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPN 70
           V  +   G  A+ ++ DV K  + +   E+     G+L  LV NA   +     + ++  
Sbjct: 67  VRQIREAGGQALAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLE 126
Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSA 130
             +   EI+  G+F+   EA+K  +                   A L     +  +  +A
Sbjct: 127 RLQRXFEINVFGSFLCAREAVK--RXSTRYGGSGGSIVNVSSAAARLGSPGQY--VDYAA 182
Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AK A+D+ T  LA E  T+  IRVN + PG I+     S   P   R  A   +   + G
Sbjct: 183 AKGAIDTFTLGLAKEVATE-GIRVNAVRPGIIETDIHASGGLPNRARDVAPQ-VPXQRAG 240
Query: 191 EKWDIAMAALYLASD 205
              ++A A ++L  D
Sbjct: 241 TAREVAEAIVWLLGD 255

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFI 85
           DV   E     V S     G++DILV A AG  +  V AED++   +   ++I+  G F 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILV-ACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
            C    + + +                  + L       Q   +A+KA V    RSLA E
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSM------SGLIVNRPQQQAAYNASKAGVHQYIRSLAAE 182
Query: 146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           W   + IR N +AP  I+ T     +   E+           + G+  ++A    +LASD
Sbjct: 183 WAP-HGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASD 241
Query: 206 A 206
           A
Sbjct: 242 A 242

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 58/136 (42%), Gaps = 15/136 (11%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           DV   ED  RVV      FG +D LVN A    G FL   E  S   FR V+EI+  G F
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVF 115
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           I     +  +K                     L  T+++      A+K  V  +++  A+
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSY-----GASKWGVRGLSKLAAV 167
Query: 145 EWGTDYAIRVNGIAPG 160
           E GTD  IRVN + PG
Sbjct: 168 ELGTDR-IRVNSVHPG 182

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 14/194 (7%)
Query: 16  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSP-NGF 72
           H+     + +  DV    D    + +T+  FG +D+LVN A   GN        +P   F
Sbjct: 48  HAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQF 107
Query: 73  RTVIEIDSVGTFIMCHEALKY-LKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
             V+ ++  G F+ C   L + L +                      YT +         
Sbjct: 108 DKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTS--------- 158
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K AV  +T+S+A+++     IR N + PG I+      +L   E+R +    +   + G 
Sbjct: 159 KGAVLQLTKSVAVDYAGS-GIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGT 217
Query: 192 KWDIAMAALYLASD 205
              +A A ++LA +
Sbjct: 218 AAQVADAVMFLAGE 231

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV +  +   +  + I  +G+LD+LVN A          +  + +++V++++  G F+  
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCS 145
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             A K + K                  + +       Q + SAAKA V  +T+++A E  
Sbjct: 146 RAAAKIMLK--------QRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           +   I VN +APG I  T   S+LA E    K  + +   ++GE  ++A    +LA+D
Sbjct: 198 S-RGITVNAVAPGFIA-TDMTSELAAE----KLLEVIPLGRYGEAAEVAGVVRFLAAD 249

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 20/194 (10%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG--- 71
           + + G  A+  + DV       R+  +    FG +D+LVN A    + P   ++  G   
Sbjct: 72  IEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAG---IXPLTTIAETGDAV 128
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  VI ++  GTF    EA + L+                     LH +   Y I+ +AA
Sbjct: 129 FDRVIAVNLKGTFNTLREAAQRLR------VGGRIINXSTSQVGLLHPS---YGIY-AAA 178
Query: 132 KAAVDSITRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           KA V++ T  L+ E  G D  I VN +APGP   T    +   +E+R +        + G
Sbjct: 179 KAGVEAXTHVLSKELRGRD--ITVNAVAPGPTA-TDLFLEGKSDEVRDRFAKLAPLERLG 235
Query: 191 EKWDIAMAALYLAS 204
              DIA A  +LA 
Sbjct: 236 TPQDIAGAVAFLAG 249

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           R+   A  SLG  A+ L  D+ K +D   +V+  +   G L +LV+AAA N   PA +LS
Sbjct: 34  RNPEEAAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELS 90
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
              +R V+ +     F++   A  ++ +                    +   A       
Sbjct: 91  YEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPA------Y 144
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           + AK A+  +TR+LA EW     IRVN + PG ++    +      E+    T  +   +
Sbjct: 145 TTAKTALLGLTRALAKEW-ARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGR 203
Query: 189 FGEKWDIAMAALYLASDAVQ 208
           +    +IA  A  L  D  +
Sbjct: 204 WARPEEIARVAAVLCGDEAE 223

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNF 60
           GRR   L+   A    +G  A+ +  DV   +    +  +T+  FG++D+L N A  G  
Sbjct: 59  GRRLDALQETAA---EIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAP 115
Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT 120
            +P EDL+   ++ V++ +  G F+   EA + + K                  +   Y+
Sbjct: 116 AIPXEDLTFAQWKQVVDTNLTGPFLCTQEAFR-VXKAQEPRGGRIINNGSISATSPRPYS 174
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162
           A +     +A K A+  +T+S +L+       RV+ IA G I
Sbjct: 175 APY-----TATKHAITGLTKSTSLDG------RVHDIACGQI 205

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 12/159 (7%)
Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFL 61
            +  L  A A++   G+ A     DV   E  +  V+S +  FGK+D L N A   G F 
Sbjct: 40  NREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF- 98
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
            P +D   + F  V+ I+  G F      LK + +                         
Sbjct: 99  APVQDYPSDDFARVLTINVTGAF----HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM 154
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
             Y      +K A+ ++T + AL+    Y IRVN I+PG
Sbjct: 155 AAY----GTSKGAIIALTETAALDL-APYNIRVNAISPG 188

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNGFRTVIEIDSV 81
           ++ DV K+ED  ++VE  ++HFGK+D L+N  AG ++   +   D   + +  +I+ +  
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLIN-NAGPYVFERKKLVDYEEDEWNEMIQGNLT 120
Query: 82  GTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 141
             F +    +  ++K                    ++ +A       +AAK  + S+T++
Sbjct: 121 AVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSA------FAAAKVGLVSLTKT 174
Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAAL 200
           +A E   +Y I  N + PG   D  G  K A  +E R          + G   DIA    
Sbjct: 175 VAYEEA-EYGITANMVCPG---DIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTIS 230
Query: 201 YLASD 205
           +L  D
Sbjct: 231 FLCED 235

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 17/195 (8%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNG 71
           L + G+   GL  DV   E     +E    H G+  I+VN A     N LV  +D     
Sbjct: 71  LKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDE--- 127
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
                  D V T +    +L  L K                  + +       Q + +AA
Sbjct: 128 -----WFDVVNTNL---NSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAA 179
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA ++  TR+LA E G+  AI VN +APG I DT    +L PE  R      +   + G+
Sbjct: 180 KAGLEGFTRALAREVGS-RAITVNAVAPGFI-DTDMTREL-PEAQREALLGQIPLGRLGQ 236
Query: 192 KWDIAMAALYLASDA 206
             +IA    +LASD 
Sbjct: 237 AEEIAKVVGFLASDG 251

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKAT 181
           Y   +S+AKAA++S  R+LA E G   A+RVN I+ GP+K  A   + K   +     A 
Sbjct: 202 YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAI 261
Query: 182 DYMAA----YKFGEKWDIAMAALYLAS 204
           DY  A     K  E  D+  AAL+L S
Sbjct: 262 DYSEANAPLQKELESDDVGRAALFLLS 288

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL 61
           R +  L   +      G+   G   D+  R +  +++++  + F GKL+ILVN A     
Sbjct: 53  RNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH 112
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
             A+D +   +  ++  +         EA  +L +                  +   ++A
Sbjct: 113 KEAKDFTEKDYNIIMGTN--------FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA 164
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTA 166
                  SA+K A++ +T+SLA EW  D  IRVN +APG    P+ +TA
Sbjct: 165 LPSVSLYSASKGAINQMTKSLACEWAKD-NIRVNSVAPGVILTPLVETA 212

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKAT 181
           Y   +S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A   + K   +     A 
Sbjct: 189 YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAI 248
Query: 182 DY 183
           DY
Sbjct: 249 DY 250

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 15/211 (7%)
Query: 1   MGRRKTVLRSAVAALHSLGIP--AIGLE-GDVRKREDAVRVVESTINHFGKLDILVNAAA 57
           +GR    L  AV  L +LG    AI  E  D+   ++  R V++     G+L  +V+ A 
Sbjct: 41  VGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG 100
Query: 58  GNFLV-PAEDLSPNGFRTVIEIDSVGT-FIMCHEALKYLKKXXXXXXXXXXXXXXXXXXA 115
           G+  + P   +    +R  ++++  GT +++ H A + ++                    
Sbjct: 101 GSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN---- 156
Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
               T  W+  +    K+AVD + +  A E G  + +RVN I PG I+     +     E
Sbjct: 157 ----THRWFGAY-GVTKSAVDHLMQLAADELGASW-VRVNSIRPGLIRTDLVAAITESAE 210
Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           + S         + GE  D+A  A++L SDA
Sbjct: 211 LSSDYAMCTPLPRQGEVEDVANMAMFLLSDA 241

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           A+K AV  +TR+LA EW     +RVN +APG +     +      E+     D     + 
Sbjct: 161 ASKGAVHQLTRALAAEW-AGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRC 219
Query: 190 GEKWDIAMAALYLASDA 206
           GE  +IA AAL+LAS A
Sbjct: 220 GEPSEIAAAALFLASPA 236

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 69/184 (37%), Gaps = 21/184 (11%)
Query: 2   GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G R  VL  +   L  L    G  A+G+ GDVR  +D  R  E  +  FGK+D L+ NA 
Sbjct: 29  GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAG 88
Query: 57  AGNFLVPAEDLSPN----GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXX 112
             ++     DL  +     F  +  ++  G        L  L                  
Sbjct: 89  IWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP 148
Query: 113 XXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKL 171
                 YTAT         K AV  + R +A E      +RVNG+APG +  D  G S L
Sbjct: 149 NGGGPLYTAT---------KHAVVGLVRQMAFELAPH--VRVNGVAPGGMNTDLRGPSSL 197
Query: 172 APEE 175
              E
Sbjct: 198 GLSE 201

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Query: 9   RSAVAALHS------LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           RS  AAL +      LG+  + ++ +V +      + +     FG+LD+ VN AA   L 
Sbjct: 37  RSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLR 96
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
           P  +L    +   + I++        EA K ++K                   ++ Y   
Sbjct: 97  PVMELEETHWDWTMNINAKALLFCAQEAAKLMEK------NGGGHIVSISSLGSIRYLEN 150
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +  + VS  KAA++++TR LA+E      I VN ++ G I   A
Sbjct: 151 YTTVGVS--KAALEALTRYLAVELSPKQII-VNAVSGGAIDTDA 191

>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATDY 183
           S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A   + K   +     A DY
Sbjct: 194 SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDY 250

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXX 106
           G +DILVN A+    V  +D+  + +R +I+++  GTFI+       ++           
Sbjct: 79  GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMR-------AAGK 131
Query: 107 XXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
                   +   +  T       AAK  V   TR+LA E G  Y I  N + PG I ++ 
Sbjct: 132 AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGK-YNITANAVTPGLI-ESD 189
Query: 167 GVSKLAPEEIRSKATDYMAAYKF-GEKWDIAMAALYLASD 205
           GV K +P        + + A K  G+   IA    +LASD
Sbjct: 190 GV-KASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASD 228

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 29/152 (19%)
Query: 26  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEI 78
           E DV K E    +  S     G LD +V++ A     P E L       S + F T +EI
Sbjct: 62  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA---FAPKEALEGSLLETSKSAFNTAMEI 118
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT-ATWYQIHVSA---AKAA 134
            SV + I     LK L                     TL Y  +T Y  H +    AKAA
Sbjct: 119 -SVYSLIELTNTLKPL-------------LNNGASVLTLSYLGSTKYMAHYNVMGLAKAA 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           ++S  R LA++ G  + IRVN ++ GPI+  A
Sbjct: 165 LESAVRYLAVDLGKHH-IRVNALSAGPIRTLA 195

>pdb|2O2Y|A Chain A, The Crystal Structure Of P. Falciparum Enoyl Acyl Carrier Protein Reductase Length = 349

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A
Sbjct: 198 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 236

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 11/191 (5%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           L   G  A  ++ D     D +  +++ +   G L  LVN A       A  +    F  
Sbjct: 74  LEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHH 133
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           VI+ +    FI C EALK + K                  + +       Q + SA+K  
Sbjct: 134 VIDNNLTSAFIGCREALKVMSK--------SRFGSVVNVASIIGERGNMGQTNYSASKGG 185
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           + ++++S A E G    IR N + PG I+     +    +E+++     +   + G   +
Sbjct: 186 MIAMSKSFAYE-GALRNIRFNSVTPGFIETDMNAN--LKDELKADYVKNIPLNRLGSAKE 242
Query: 195 IAMAALYLASD 205
           +A A  +L SD
Sbjct: 243 VAEAVAFLLSD 253

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           LE DV  R+     V ST+   G LDILVN A    L P ED     +  +I+ + +G  
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 120
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            M   AL +L +                        A  YQ    A K  V++ + +L  
Sbjct: 121 YMTRAALPHLLRSKGTVVQMSSIAGRVNV-----RNAAVYQ----ATKFGVNAFSETLRQ 171
Query: 145 EWGTDYAIRVNGIAPG 160
           E  T+  +RV  I PG
Sbjct: 172 EV-TERGVRVVVIEPG 186

>pdb|1VRW|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Nadh Length = 336

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 223

>pdb|3AM3|A Chain A, A372m Mutant Of Enoyl-Acp Reductase From Plasmodium Falciparum (Pfenr) In Complex With Triclosan Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A
Sbjct: 186 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224

>pdb|2OL4|A Chain A, Crystal Structure Of Plasmodium Falciparum Enoyl Acp Reductase With Triclosan Reductase Length = 338

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A
Sbjct: 194 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 232

>pdb|2FOI|A Chain A, Synthesis, Biological Activity, And X-Ray Crystal Structural Analysis Of Diaryl Ether Inhibitors Of Malarial Enoyl Acp Reductase. Length = 269

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 223

>pdb|1UH5|A Chain A, Crystal Structure Of Enoyl-Acp Reductase With Triclosan At 2.2angstroms Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A
Sbjct: 186 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 14/206 (6%)
Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNFLV 62
           R T+L  +V  L   G  A G+  DV   E A+    S ++  G  +DIL+N A   +  
Sbjct: 42  RATLLAESVDTLTRKGYDAHGVAFDVTD-ELAIEAAFSKLDAEGIHVDILINNAGIQYRK 100
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKXXXXXXXXXXXXXXXXXXATLHYT 120
           P  +L    ++ VI+ +    F++   A K +  +                       YT
Sbjct: 101 PMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT 160
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                    AAK  +  +T S+A EW   + I+ N I PG I      + +  ++  S  
Sbjct: 161 ---------AAKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYILTDMNTALIEDKQFDSWV 210
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                + ++G   ++   A++L+S A
Sbjct: 211 KSSTPSQRWGRPEELIGTAIFLSSKA 236

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 48  KLDILVNAAAGNFLVPAEDLSPNGFRTVIEID---------SVGTFIMCHEALKYLKKXX 98
           ++D+LVN A      PAE++S   +R V+ ++         S GT ++ H + + +    
Sbjct: 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVT--- 162
Query: 99  XXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158
                           + L +         +A+K AV  +TR+LA EW     + VN +A
Sbjct: 163 --------------IASMLSFQGGRNVAAYAASKHAVVGLTRALASEW-AGRGVGVNALA 207
Query: 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           PG +      +  A +E  ++ T  + A ++    D+   A++LASDA
Sbjct: 208 PGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDA 255

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 81/207 (39%), Gaps = 17/207 (8%)
Query: 2   GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           GR    + + VA L  LG    IG++ DV  R     +    +  FG +D+ V A AG F
Sbjct: 41  GRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDV-VCANAGVF 99
Query: 61  L-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHY 119
              P   ++P     +  ++  GTF      L  L                    +++  
Sbjct: 100 PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDAL---------IASGSGRVVLTSSITG 150
Query: 120 TATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
             T Y    H  A KAA     R+ A+E    + I VN I PG I  T G+ +   E I 
Sbjct: 151 PITGYPGWSHYGATKAAQLGFMRTAAIEL-APHKITVNAIMPGNIM-TEGLLENGEEYIA 208
Query: 178 SKATDYMAAYKFGEKWDIAMAALYLAS 204
           S A   + A   G   DI   A +LA+
Sbjct: 209 SMARS-IPAGALGTPEDIGHLAAFLAT 234

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 12/173 (6%)
Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           +A   + ++G  A+    DVR  +     VE  I  FG +DILVN A+   L    D   
Sbjct: 91  TAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPT 150
Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV- 128
                ++ +++ GT++     + YLKK                    L+    W++ H  
Sbjct: 151 KRLDLMMNVNTRGTYLASKACIPYLKK--------SKVAHILNISPPLNLNPVWFKQHCA 202
Query: 129 -SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
            + AK  +      +A E+  +  I VN + P     TA +  L    I S+ 
Sbjct: 203 YTIAKYGMSMYVLGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIESQC 253

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           M R +  L++  A L      A+ L GDVR+  D  R V +    FG+L  LVN A    
Sbjct: 35  MARDEKRLQALAAELEG----ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV 90
Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
           + P  +L+   +R V++ +  G F+    A+  L
Sbjct: 91  MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL 124

>pdb|1NHG|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Triclosan Length = 229

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 223

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN AA    N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLAS 204
           IA A  +LAS
Sbjct: 222 IASAVAFLAS 231

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 19  GIPAIGLEG-DVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           G P + + G ++ + E A  +V       G LD LVN A       LV  +D     +  
Sbjct: 50  GSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKD---EDWEA 106
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           V+E +    F    EA+K + K                  + +       Q +  A+KA 
Sbjct: 107 VLEANLSAVFRTTREAVKLMMKARFGRIVNIT--------SVVGILGNPGQANYVASKAG 158
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           +   TR++A E+     I VN +APG I+    +++  P+E++      + A +FG   +
Sbjct: 159 LIGFTRAVAKEY-AQRGITVNAVAPGFIETE--MTERLPQEVKEAYLKQIPAGRFGRPEE 215
Query: 195 IAMAALYLASD 205
           +A A  +L S+
Sbjct: 216 VAEAVAFLVSE 226

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 25/164 (15%)
Query: 48  KLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXX 104
           K DIL+N A    G F+   E+ +   F   + +++   F +  +AL  L+         
Sbjct: 91  KFDILINNAGIGPGAFI---EETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNSRII--- 144
Query: 105 XXXXXXXXXXATLHYTATWYQ----IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                       +   AT       I  S  K A+++ T +LA + G    I VN I PG
Sbjct: 145 -----------NISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGA-RGITVNAILPG 192
Query: 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
            +K       L+    +  AT   A  + GE  DIA  A +LAS
Sbjct: 193 FVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLAS 236

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN A     N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGAIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLAS 204
           IA A  +LAS
Sbjct: 222 IASAVAFLAS 231

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 17/194 (8%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNG 71
           +  LG  A+ ++ D+    +    + +  + FG++  LV+ A G  L+  +   ++    
Sbjct: 53  IEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGG--LIARKTIAEMDEAF 110
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           +  V++++    F+    AL  + K                    L Y         + +
Sbjct: 111 WHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAY---------ATS 161
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K AV + TR LA E G    IRVN + PG I  T   +   P E+R +     +  + G 
Sbjct: 162 KGAVMTFTRGLAKEVGPK--IRVNAVCPGMISTTFHDTFTKP-EVRERVAGATSLKREGS 218
Query: 192 KWDIAMAALYLASD 205
             D+A    +LASD
Sbjct: 219 SEDVAGLVAFLASD 232

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 15/196 (7%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++ V+ +   G  A+ +  D R  E   + +  T+   G LDILVN+A      P E+ +
Sbjct: 70  QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETT 129
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
              F  V  ++    F+    A ++L                    + L     W  I +
Sbjct: 130 VADFDEVXAVNFRAPFVAIRSASRHLGD----------GGRIITIGSNLAELVPWPGISL 179
Query: 129 -SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            SA+KAA+  +T+ LA + G    I VN + PG        +     E +    + +A  
Sbjct: 180 YSASKAALAGLTKGLARDLGP-RGITVNIVHPGSTDTDXNPADGDHAEAQR---ERIATG 235
Query: 188 KFGEKWDIAMAALYLA 203
            +GE  DIA    +LA
Sbjct: 236 SYGEPQDIAGLVAWLA 251

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRSKATDY 183
           S  KAAV  +T+S+A ++     IR N + PG + DT  + +       PEE R+     
Sbjct: 148 STTKAAVIGLTKSVAADF-IQQGIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKR 205
Query: 184 MAAYKFGEKWDIAMAALYLASD 205
               +F    +IAM  +YLASD
Sbjct: 206 QKTGRFATAEEIAMLCVYLASD 227

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 21/214 (9%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEG---DVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR +  L      +   G+PA  +     DV +      ++ +T+  FGK+DILVN A  
Sbjct: 57  GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGA 116
Query: 59  NFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXAT 116
           N        D     ++   +++      M  +  ++L K                  + 
Sbjct: 117 NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG 176
Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
             Y A         AKAA+D  TR  A++    + +RVN ++PG +      +   PE  
Sbjct: 177 YPYYA--------CAKAALDQYTRCTAIDL-IQHGVRVNSVSPGAVATGFMGAMGLPETA 227
Query: 177 RSKATDYMAAYK-------FGEKWDIAMAALYLA 203
             K   ++ + K        G+  +IA   ++LA
Sbjct: 228 SDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Query: 49  LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXX 108
           +DILVN A   F  P  +L    ++ VI+ +    F++  EA K +              
Sbjct: 104 VDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSL 163
Query: 109 XXXXXXATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167
                 AT+  YT          AK  +  +TR++A EW   Y I+ N I PG +     
Sbjct: 164 TSELARATVAPYT---------VAKGGIKMLTRAMAAEW-AQYGIQANAIGPGYMLTDMN 213
Query: 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            + +   E  +       A ++G+  ++   A++L++ A
Sbjct: 214 QALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASA 252

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           SA+K A+  +TRSLA E+  +  IRVN IAPG I    G    A  E   +        +
Sbjct: 148 SASKGAIVQLTRSLACEYAAER-IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR 206
Query: 189 FGEKWDIAMAALYLA 203
           +GE  ++A AA +L 
Sbjct: 207 WGEAPEVASAAAFLC 221

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 23  IGLEGDVRKREDAVRV-VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           + L+ D+R+ ED VR  V +T++ FG +DILVN A+  +L    D     F    ++++ 
Sbjct: 65  LALKCDIRE-EDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNAR 123
Query: 82  GTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV--SAAKAAVDSIT 139
           G+F+     L +L +                          W+  H   + AK     +T
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPPS--------LNPAWWGAHTGYTLAKXGXSLVT 175
Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171
             LA E+G    + +N + P  +  T  ++ L
Sbjct: 176 LGLAAEFGPQ-GVAINALWPRTVIATDAINXL 206

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN A     N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVG--------SVVGTMGNAGQANFAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLAS 204
           IA A  +LAS
Sbjct: 222 IASAVAFLAS 231

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 9/159 (5%)
Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXX 106
           G +DILVN A+    V  +D+  + +R +I+++  GTFI+        +           
Sbjct: 79  GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQXR-------AAGK 131
Query: 107 XXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
                   +   +  T       AAK  V   TR+LA E G  Y I  N + PG I ++ 
Sbjct: 132 AGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGK-YNITANAVTPGLI-ESD 189
Query: 167 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           GV      E         A    G+   IA    +LASD
Sbjct: 190 GVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASD 228

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 22/194 (11%)
Query: 26  EGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           E DVR  +     V+S +   G+LDI+V NA  GN     +  S   +  +I+I+  G +
Sbjct: 82  EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVW 141
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
                  K +K                   +     A  +  H  AAK  V  + R+  +
Sbjct: 142 -------KTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGV 194
Query: 145 EWGTDYAIRVNGIAP----GPIKDTAGVSKLAPEEIRSKATDYMA---------AYKFGE 191
           E G  + IRVN + P     P+    G  K+   ++ +   D MA            + E
Sbjct: 195 ELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVE 253
Query: 192 KWDIAMAALYLASD 205
             DI+ A L+ ASD
Sbjct: 254 PIDISNAVLFFASD 267

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 13/172 (7%)
Query: 38  VVESTINHFGKLDI-LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96
           +VE  +  FG LD    NA A   +     LS  G+R  ++ +    F+    A KY   
Sbjct: 75  LVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL----AAKY--- 127
Query: 97  XXXXXXXXXXXXXXXXXXATLHYTATWYQIH-VSAAKAAVDSITRSLALEWGTDYAIRVN 155
                             + + +TA +  +   +A+KA +  + ++LA+E G    IRVN
Sbjct: 128 -QVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGA-RGIRVN 185
Query: 156 GIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
            + PG     A  + L  A  E R       A  +     +IA AALYLASD
Sbjct: 186 ALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASD 237

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN A     N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLAS 204
           IA A  +LAS
Sbjct: 222 IASAVAFLAS 231

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAY 187
           +AAK  V  +T+ LA EW     I VN IAPG I +T     L  +  R+KA  + + A 
Sbjct: 153 TAAKHGVAGLTKLLANEWAAK-GINVNAIAPGYI-ETNNTEALRADAARNKAILERIPAG 210
Query: 188 KFGEKWDIAMAALYLASDA 206
           ++G   DIA AA++L+S A
Sbjct: 211 RWGHSEDIAGAAVFLSSAA 229

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
3imf_A	257	Short chain dehydrogenase; structural genomics, in	6e-75
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-74
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-73
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-57
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	6e-45
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	9e-43
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-42
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-42
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-42
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-41
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-41
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-41
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-41
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-41
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-41
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-41
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	7e-41
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	8e-41
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-40
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-40
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-40
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-40
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-40
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-40
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-40
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-40
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	9e-40
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-39
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-39
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-39
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-39
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-39
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	6e-39
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-39
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-38
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-38
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-38
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-38
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-38
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-38
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-38
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	4e-38
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-38
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	6e-38
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	6e-38
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-38
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	8e-38
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-37
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-37
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-37
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-37
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-37
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-37
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-37
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	9e-37
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	9e-37
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-36
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-36
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-36
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-36
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-36
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-36
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-36
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-36
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-36
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-36
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-36
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	5e-36
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	6e-36
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	9e-36
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-35
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-35
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-35
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-35
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-35
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-35
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-35
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-35
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-35
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	6e-35
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	6e-35
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-34
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-34
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-34
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-34
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	5e-34
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-34
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-34
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	9e-34
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-33
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	7e-33
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-32
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-32
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-32
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-32
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-32
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-32
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	8e-32
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-31
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-31
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-31
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-31
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-31
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-31
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	8e-31
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-30
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-30
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-30
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-30
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	5e-30
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-30
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	6e-30
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	7e-30
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-29
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-29
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-29
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-29
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	6e-29
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	6e-29
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	9e-29
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	9e-29
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-28
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-28
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-28
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-28
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-28
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-28
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	7e-28
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	8e-28
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-27
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-26
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-26
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-26
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-26
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-26
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	6e-26
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-25
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	6e-25
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	8e-25
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-24
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-24
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-24
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-24
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-24
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-24
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-24
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-24
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-24
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-24
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	8e-24
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-23
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-23
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-23
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-23
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-23
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-22
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	5e-22
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	9e-22
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-21
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-21
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-21
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-21
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-20
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	7e-20
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	8e-20
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-19
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	7e-19
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-18
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	5e-18
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-18
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	9e-18
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-17
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-17
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-16
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-17
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-17
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	6e-17
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-16
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-16
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-16
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-16
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	4e-15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	3e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	4e-14
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-13
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	8e-13
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	9e-13
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	9e-13
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-12
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-12
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	2e-12
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-12
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-12
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	4e-12
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-12
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	5e-12
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	6e-12
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	7e-12
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	9e-12
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-11
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	7e-06

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  225 bits (576), Expect = 6e-75
 Identities = 83/207 (40%), Positives = 112/207 (54%), Gaps = 8/207 (3%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            GR K  L  A   +       + ++ DVR  +D  +++E     FG++DIL+N AAGNF
Sbjct: 36  TGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNF 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + PAEDLS NG+ +VI I   GTF       KY  + G         G IIN+ AT  + 
Sbjct: 96  ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-------KGNIINMVATYAWD 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSK 179
           A    IH +AAKA V ++T++LA+EWG  Y IRVN IAPGPI+ T G  KL   EE+  +
Sbjct: 149 AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKR 208

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
               +   + G   +IA  A YL SD 
Sbjct: 209 TIQSVPLGRLGTPEEIAGLAYYLCSDE 235

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  225 bits (576), Expect = 2e-74
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 10/208 (4%)

Query: 1   MGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
             R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGN
Sbjct: 56  ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGN 115

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           F+ P E LSPN ++T+ +I   GT  +  E  K L K  +       G   ++I+     
Sbjct: 116 FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAE 168

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRS 178
           T + + +  ++AKA V+++++SLA EWG  Y +R N I PGPIK     S+L P      
Sbjct: 169 TGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK 227

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
           +    +   + G   ++A  A +L SD 
Sbjct: 228 EMIGRIPCGRLGTVEELANLAAFLCSDY 255

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  223 bits (570), Expect = 1e-73
 Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 11/208 (5%)

Query: 1   MGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
             R    + +A   L  + G   + L  DVR     +  V+  +  FG++DIL+N AAGN
Sbjct: 57  ASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGN 116

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           FL PA  LS N F+TV++ID+ GTF +     +   +          GG+I+NI+ATL  
Sbjct: 117 FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGN 168

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRS 178
                Q+H  +AKAAVD++TR LA+EWG    IRVN +APGPI  T G+ +L   +   S
Sbjct: 169 RGQALQVHAGSAKAAVDAMTRHLAVEWGP-QNIRVNSLAPGPISGTEGLRRLGGPQASLS 227

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
                    + G K +IA + LYLAS  
Sbjct: 228 TKVTASPLQRLGNKTEIAHSVLYLASPL 255

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  181 bits (462), Expect = 4e-57
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 17/212 (8%)

Query: 2   GRRKTVLRSAVAAL-----HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56
            R+   L+SA   L      +     I ++ ++R  E+   +V+ST++ FGK++ LVN  
Sbjct: 49  SRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG 108

Query: 57  AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
            G FL PAE +S  G+  V+E +  GTF MC        K          GG I+NI   
Sbjct: 109 GGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVP 160

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--E 174
                    +H  AA+A V ++T+SLALEW     IR+N +APG I     V       +
Sbjct: 161 -TKAGFPLAVHSGAARAGVYNLTKSLALEWAC-SGIRINCVAPGVIYSQTAVENYGSWGQ 218

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                +   + A + G   +++    +L S A
Sbjct: 219 SFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 250

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  149 bits (378), Expect = 6e-45
 Identities = 44/215 (20%), Positives = 89/215 (41%), Gaps = 20/215 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R    L      +   G  A+ +  D+        +V+ T+  +G++D+++ NA     
Sbjct: 42  ARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPS 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + P  + +    R  IE+   G   +       L++           G ++N+++ +   
Sbjct: 102 MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES---------KGAVVNVNSMVVRH 152

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKL 171
           +         AK+A+ +++++LA E G +  IRVN + PG I            AG    
Sbjct: 153 SQAKYGAYKMAKSALLAMSQTLATELG-EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGT 211

Query: 172 APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           + E+I + A       +   + ++A A L++ASD 
Sbjct: 212 SVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL 246

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  143 bits (363), Expect = 9e-43
 Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 18/209 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR ++ +          G     L  D+    +   +  +     G +D+L   A  + L
Sbjct: 39  GRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P + +S   +     +++ G F         +++GG           I+  S+      
Sbjct: 96  EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGS----------IVFTSSVADEGG 145

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIR 177
                  SA+KAA+ S    LA E      IRVN ++PG I       AG+++    E +
Sbjct: 146 HPGMSVYSASKAALVSFASVLAAELL-PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFK 204

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDA 206
           +   +     + G   ++A A L+LA +A
Sbjct: 205 TLGDNITPMKRNGTADEVARAVLFLAFEA 233

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  143 bits (363), Expect = 1e-42
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 21/211 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GRRK VL +A+A +   G  A+G++ D     +  R+ E      G++D+L   A G  +
Sbjct: 60  GRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSM 116

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
           +P  +++   +    + +  G      +AL  L +G            ++   +T   T 
Sbjct: 117 LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSS----------VVLTGSTAGSTG 166

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSK 179
           T      +A+KAA+ S  R+  L+   D  IR+N ++PGP  +T G+ +LA      +  
Sbjct: 167 TPAFSVYAASKAALRSFARNWILDLK-DRGIRINTLSPGPT-ETTGLVELAGKDPVQQQG 224

Query: 180 ATDYMAAY----KFGEKWDIAMAALYLASDA 206
             + +AA     + G   ++A AAL+LASD 
Sbjct: 225 LLNALAAQVPMGRVGRAEEVAAAALFLASDD 255

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  142 bits (361), Expect = 2e-42
 Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 15/210 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A    
Sbjct: 40  SRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI 99

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++ I+    + +   A  +LK            G ++ IS+     
Sbjct: 100 YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGAL 151

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A  Y+    A K A+D +TR LA EW  D  IRVNG+ PG I  T+ V     +  + + 
Sbjct: 152 AVPYEAVYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVIA-TSLVEMTIQDPEQKEN 209

Query: 181 TDYMAAY----KFGEKWDIAMAALYLASDA 206
            + +       + GE  ++A    +L   A
Sbjct: 210 LNKLIDRCALRRMGEPKELAAMVAFLCFPA 239

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  141 bits (359), Expect = 4e-42
 Identities = 47/207 (22%), Positives = 80/207 (38%), Gaps = 11/207 (5%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           GR  + L +A  AL    G     +  D+ + +    +       FG LD+LVN A  + 
Sbjct: 51  GRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH 110

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  D  P  F   I ++     ++     K +   G        GG II +++     
Sbjct: 111 PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE-------GGAIITVASAAALA 163

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSK 179
                     +KA +   T+ LA E G  + IR N + P  +  T    ++   E   + 
Sbjct: 164 PLPDHYAYCTSKAGLVMATKVLARELG-PHGIRANSVCPTVV-LTEMGQRVWGDEAKSAP 221

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
               +   +F    +++ A ++LASDA
Sbjct: 222 MIARIPLGRFAVPHEVSDAVVWLASDA 248

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  141 bits (357), Expect = 1e-41
 Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 14/210 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +      G+   G   D+  R +  +++++  + F GKL+ILVN A    
Sbjct: 52  SRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI 111

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++  +    + +   A   LK            G +I +S+   ++
Sbjct: 112 HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFS 163

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEI 176
           A       SA+K A++ +T+SLA EW     IRVN +APG I     +TA       +E 
Sbjct: 164 ALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 222

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                      + G+  +++    +L   A
Sbjct: 223 IDNFIVKTPMGRAGKPQEVSALIAFLCFPA 252

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  140 bits (355), Expect = 1e-41
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 12/206 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
           R++  +   VA L   G+   G    V K ED  R+V   +N  G +DILV NAA   F 
Sbjct: 46  RKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFF 105

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               D +   +  ++ ++   T +M    +  ++K G        GG ++ +S+   Y  
Sbjct: 106 GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG--------GGSVLIVSSVGAYHP 157

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
                  + +K A+  +T++LA+E      IRVN +APG IK T     L   +  +   
Sbjct: 158 FPNLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPGLIK-TNFSQVLWMDKARKEYM 215

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            + +   + G   D A    +L S+ 
Sbjct: 216 KESLRIRRLGNPEDCAGIVSFLCSED 241

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  140 bits (355), Expect = 1e-41
 Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 11/198 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
              V  +  LG  A     D+   ++   + +  I+  GK+DILVN A G       D+ 
Sbjct: 49  NHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMP 107

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              FR   E++    F +       ++K G        GG+I+ I++             
Sbjct: 108 MADFRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSY 159

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +++KAA   + R++A + G    IRVNGIAPG I  T  +  +   EI  K   +    +
Sbjct: 160 ASSKAAASHLVRNMAFDLGE-KNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRR 217

Query: 189 FGEKWDIAMAALYLASDA 206
            G+  DIA AAL+L S A
Sbjct: 218 LGQPQDIANAALFLCSPA 235

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  140 bits (355), Expect = 1e-41
 Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 12/195 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              L   G      + D+   E+  ++ +     FGK+DI +N        P  + S   
Sbjct: 55  KDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE 114

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F  +  I++   +    +A K++   G           II I+ +L    T +    +  
Sbjct: 115 FDAMDTINNKVAYFFIKQAAKHMNPNGH----------IITIATSLLAAYTGFYSTYAGN 164

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA V+  TR+ + E      I VN IAPGP+ DT+       +E  +         +  +
Sbjct: 165 KAPVEHYTRAASKELM-KQQISVNAIAPGPM-DTSFFYGQETKESTAFHKSQAMGNQLTK 222

Query: 192 KWDIAMAALYLASDA 206
             DIA    +L +D 
Sbjct: 223 IEDIAPIIKFLTTDG 237

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  139 bits (354), Expect = 3e-41
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 15/210 (7%)

Query: 2   GRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR    L  AV  L +LG           D+   ++  R V++     G+L  +V+ A G
Sbjct: 42  GRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGG 101

Query: 59  N-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
           +  + P   +    +R  ++++  GT  +   A + + +GG        GG  + IS+  
Sbjct: 102 SENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG--------GGSFVGISSIA 153

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEI 176
                 +       K+AVD + +  A E G    +RVN I PG I  T  V+ +    E+
Sbjct: 154 ASNTHRWFGAYGVTKSAVDHLMQLAADELG-ASWVRVNSIRPGLI-RTDLVAAITESAEL 211

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            S         + GE  D+A  A++L SDA
Sbjct: 212 SSDYAMCTPLPRQGEVEDVANMAMFLLSDA 241

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  138 bits (351), Expect = 5e-41
 Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 9/197 (4%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A            + D    +   ++ ++T   FG +  LVN A        E+ +  
Sbjct: 45  KAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTA 104

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +R ++ ++  G F      ++ +K  G        G  IIN+S+   +         +A
Sbjct: 105 EWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNA 157

Query: 131 AKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           +K AV  +++S AL+    DY +RVN + PG I  T  V  L   E              
Sbjct: 158 SKGAVRIMSKSAALDCALKDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHI 216

Query: 190 GEKWDIAMAALYLASDA 206
           GE  DIA   +YLAS+ 
Sbjct: 217 GEPNDIAYICVYLASNE 233

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  139 bits (352), Expect = 6e-41
 Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 27/220 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-- 56
           GR    L      +   G+       +  DV   +   +++ ST+  FGK+D+LVN A  
Sbjct: 37  GRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGA 96

Query: 57  --AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
                F     D   + +   ++++      M  +   +L             G I+N+S
Sbjct: 97  AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS---------KGEIVNVS 147

Query: 115 ATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA- 172
           + +    A    ++ + AKAA+D  TRS A++    + IRVN ++PG + +T   + +  
Sbjct: 148 SIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMV-ETGFTNAMGM 205

Query: 173 PEEIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 205
           P++   K  ++MA++K        G+   IA   L+LA  
Sbjct: 206 PDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 245

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  138 bits (351), Expect = 7e-41
 Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 21/201 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           + SA AA+++ G   + L+ D+R+ +     V +T++ FG +DILVN A+  +L    D 
Sbjct: 50  IHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDT 109

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               F  + ++++ G+F+     L +L +             I+ ++        W+  H
Sbjct: 110 PMKRFDLMQQVNARGSFVCAQACLPHLLQAP--------NPHILTLAPPPSLNPAWWGAH 161

Query: 128 V--SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              + AK  +  +T  LA E+G    + +N + P  +  T  ++ L   +          
Sbjct: 162 TGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIATDAINMLPGVDAA-------- 212

Query: 186 AYKFGEKWDIAMAALYLASDA 206
                    +A AA  + +  
Sbjct: 213 --ACRRPEIMADAAHAVLTRE 231

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  139 bits (352), Expect = 8e-41
 Identities = 41/200 (20%), Positives = 71/200 (35%), Gaps = 18/200 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           + +A   +   G  A+ + GD+R  +     V  T+  FG +DI VN A+   L   E++
Sbjct: 53  IYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEV 112

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               F  +  I   GT+ +    + ++K              I+ +S  +     W +  
Sbjct: 113 PLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD--------NPHILTLSPPIRLEPKWLRPT 164

Query: 128 V-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
               AK  +      +A E   D  I  N + P     TA V  L   +         A 
Sbjct: 165 PYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVATAAVQNLLGGDE--------AM 215

Query: 187 YKFGEKWDIAMAALYLASDA 206
            +  +    A AA  + +  
Sbjct: 216 ARSRKPEVYADAAYVVLNKP 235

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  137 bits (348), Expect = 1e-40
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 10/206 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
             R T+L  +V  L   G  A G+  DV                   +DIL+N A   + 
Sbjct: 40  DIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +L    ++ VI+ +    F++   A K +            GG IINI +     A
Sbjct: 100 KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAA 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA- 180
                  +AAK  +  +T S+A EW   + I+ N I PG I  T   + L  ++      
Sbjct: 153 RPTVAPYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYI-LTDMNTALIEDKQFDSWV 210

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                + ++G   ++   A++L+S A
Sbjct: 211 KSSTPSQRWGRPEELIGTAIFLSSKA 236

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  138 bits (349), Expect = 1e-40
 Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 11/196 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              +  LG+  + ++ +V +      + +     FG+LD+ VN AA   L P  +L    
Sbjct: 46  AEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETH 105

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +   + I++        EA K ++K G        GG I++IS+            V  +
Sbjct: 106 WDWTMNINAKALLFCAQEAAKLMEKNG--------GGHIVSISSLGSIRYLENYTTVGVS 157

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFG 190
           KAA++++TR LA+E      I VN ++ G I DT  +      E++   A     A +  
Sbjct: 158 KAALEALTRYLAVELS-PKQIIVNAVSGGAI-DTDALKHFPNREDLLEDARQNTPAGRMV 215

Query: 191 EKWDIAMAALYLASDA 206
           E  D+     +L S  
Sbjct: 216 EIKDMVDTVEFLVSSK 231

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  138 bits (349), Expect = 1e-40
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNF 60
            R +  L   ++     G    G   D   R +  +++++  + FG KLDIL+N      
Sbjct: 45  ARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR 104

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  D +   F   I  +    + +   A   LK  G         G II +S+     
Sbjct: 105 SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVV 156

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           +       SA K A++ + R+LA EW +D  IR N +AP  I  T     +  +E +   
Sbjct: 157 SASVGSIYSATKGALNQLARNLACEWASD-GIRANAVAPAVIA-TPLAEAVYDDEFKKVV 214

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                  +FGE  +++    +L   A
Sbjct: 215 ISRKPLGRFGEPEEVSSLVAFLCMPA 240

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  137 bits (348), Expect = 3e-40
 Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 27/220 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-- 56
           GR    L      + + G+       +  DV        ++ +T+  FGKLDILVN A  
Sbjct: 37  GRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGA 96

Query: 57  --AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
               +        S   +   + ++      +  +A+ +L             G I+NIS
Sbjct: 97  AIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST---------KGEIVNIS 147

Query: 115 ATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA- 172
           +      AT    + S AKAA+D  TR+ A++    + IRVN I+PG +  T   S +  
Sbjct: 148 SIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLV-ATGFGSAMGM 205

Query: 173 PEEIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 205
           PEE   K    MA  K        G+  DIA    +LA  
Sbjct: 206 PEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADR 245

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  137 bits (348), Expect = 3e-40
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 13/207 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L+     +  +G  A+ +  DV + +    +++      G +DI V  A    +
Sbjct: 63  ARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV 122

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               D+    F+ + + +  G F+    A + +   G        GG II  ++   +  
Sbjct: 123 QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL-------GGTIITTASMSGHII 175

Query: 122 TWYQIHVS--AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
              Q       +KAAV  +T+++A+E    + IRVN ++PG I  T  V  L   +  + 
Sbjct: 176 NIPQQVSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVSPGYI-RTELVEPL--ADYHAL 231

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
               +   + G   ++    LYLAS A
Sbjct: 232 WEPKIPLGRMGRPEELTGLYLYLASAA 258

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  136 bits (346), Expect = 3e-40
 Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 14/209 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              + +   AV  L   G     +  DV   E     V S     G++DILV  A     
Sbjct: 44  DLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICIS 103

Query: 62  -VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            V AED++   +   ++I+  G F  C    + + +           G+I+ I +     
Sbjct: 104 EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK--------QGVIVAIGSMSGLI 155

Query: 121 ATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIR 177
                 Q   +A+KA V    RSLA EW   + IR N +AP  I +T          E+ 
Sbjct: 156 VNRPQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVAPTYI-ETTLTRFGMEKPELY 213

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDA 206
                     + G+  ++A    +LASDA
Sbjct: 214 DAWIAGTPMGRVGQPDEVASVVQFLASDA 242

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  136 bits (346), Expect = 3e-40
 Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 15/197 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPN 70
           VA +  LG  A+ ++ D+    +    + +  + FG++  LV+ A          ++   
Sbjct: 50  VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEA 109

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVS 129
            +  V++++    F+    AL  + KGG           I+  S+           +  +
Sbjct: 110 FWHQVLDVNLTSLFLTAKTALPKMAKGGA----------IVTFSSQAGRDGGGPGALAYA 159

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
            +K AV + TR LA E G    IRVN + PG I  T         E+R +     +  + 
Sbjct: 160 TSKGAVMTFTRGLAKEVGPK--IRVNAVCPGMI-STTFHDTFTKPEVRERVAGATSLKRE 216

Query: 190 GEKWDIAMAALYLASDA 206
           G   D+A    +LASD 
Sbjct: 217 GSSEDVAGLVAFLASDD 233

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  135 bits (343), Expect = 8e-40
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 10/200 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSP 69
           A      +G  A+ +  D+ K  D    VE+ ++ FGK+DILV NA  G+    AE + P
Sbjct: 46  AERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEP 105

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             F  ++ ++  G ++M  + + + K+ G          +I+N+++T            +
Sbjct: 106 EEFDRIVGVNVRGVYLMTSKLIPHFKENGAK----GQECVILNVASTGAGRPRPNLAWYN 161

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAA 186
           A K  V S+T++LA+E      IRV  + P    +T  ++       EEIR K  D +  
Sbjct: 162 ATKGWVVSVTKALAIELA-PAKIRVVALNPVAG-ETPLLTTFMGEDSEEIRKKFRDSIPM 219

Query: 187 YKFGEKWDIAMAALYLASDA 206
            +  +  D+A AA +L S  
Sbjct: 220 GRLLKPDDLAEAAAFLCSPQ 239

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  136 bits (344), Expect = 9e-40
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 12/198 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLS 68
              A  S+G  A+    D+        +++ TI+ FG+LDI+ N A  +    +    ++
Sbjct: 48  LAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMT 107

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
            + +     +++ GT +MC  A+  L   G        GG I+NIS+   + A       
Sbjct: 108 VDVWDDTFTVNARGTMLMCKYAIPRLISAG--------GGAIVNISSATAHAAYDMSTAY 159

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +  KAA++++TR +A ++G    +R N IAPG +  T  +    P+ I      +  A +
Sbjct: 160 ACTKAAIETLTRYVATQYGRH-GVRCNAIAPGLV-RTPRLEVGLPQPIVDIFATHHLAGR 217

Query: 189 FGEKWDIAMAALYLASDA 206
            GE  +IA    +LASD 
Sbjct: 218 IGEPHEIAELVCFLASDR 235

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  134 bits (341), Expect = 1e-39
 Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 17/201 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            +AA   LG  ++ +  DV    D   V+ +     G L++LVN A        E     
Sbjct: 45  QLAA--ELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            F  +++I++   FI C + +  +K+          GG IIN+++   +         SA
Sbjct: 103 DFSRLLKINTESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSA 153

Query: 131 AKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-- 187
           +KAAV ++TR+ AL      YAIRVN I P  I  T  +    P+ +  +   +      
Sbjct: 154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNR 212

Query: 188 --KFGEKWDIAMAALYLASDA 206
             +      IA   L+LASD 
Sbjct: 213 AGRAYMPERIAQLVLFLASDE 233

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  134 bits (340), Expect = 2e-39
 Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 17/205 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A  A   +G  A  ++ DV +++     + +T+ H G LDILVN AA   L P  +++  
Sbjct: 45  ARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRE 104

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +  I+  GT      A + +   GR       GG IIN+++              A
Sbjct: 105 SYEKLFAINVAGTLFTLQAAARQMIAQGR-------GGKIINMASQAGRRGEALVAIYCA 157

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKAT 181
            KAAV S+T+S  L+    + I VN IAPG +            A        E +    
Sbjct: 158 TKAAVISLTQSAGLDLI-KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVG 216

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
           + +   + G   D+   A++LAS  
Sbjct: 217 EAVPFGRMGTAEDLTGMAIFLASAE 241

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  134 bits (340), Expect = 3e-39
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 17/191 (8%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDS 80
           A+ +  DV + +D   +V  TI  FG+LD +VN A         E+ S  GFR ++E++ 
Sbjct: 56  AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL 115

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
           +GT+ +   AL YL+K           G +INIS+ +        +   A K AV ++T+
Sbjct: 116 LGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTK 166

Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDI 195
           +LAL+    Y +RVN I+PG I  T    +LA     P     +        + G+  ++
Sbjct: 167 ALALDES-PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEV 224

Query: 196 AMAALYLASDA 206
             AA++LAS+A
Sbjct: 225 GAAAVFLASEA 235

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  135 bits (341), Expect = 4e-39
 Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 25/218 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR +  L      +   G+PA     +  DV +      ++ +T+  FGK+DILVN A  
Sbjct: 57  GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGA 116

Query: 59  NF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SA 115
           N        D     ++   +++      M  +  ++L K         + G I+N+ S 
Sbjct: 117 NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK---------TKGEIVNVSSI 167

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PE 174
                A     + + AKAA+D  TR  A++    + +RVN ++PG +  T  +  +  PE
Sbjct: 168 VAGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAV-ATGFMGAMGLPE 225

Query: 175 EIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 205
               K   ++ + K        G+  +IA   ++LA  
Sbjct: 226 TASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR 263

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  134 bits (339), Expect = 5e-39
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 15/201 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           AV   + +G  A G+  DV   +DA  +VE T   +G++D+LVN A          +   
Sbjct: 64  AVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEE 123

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  ++ ++  G F+     +  +++ G        GG IIN ++    +A   +    A
Sbjct: 124 TWDRIMSVNVKGIFLCSKYVIPVMRRNG--------GGSIINTTSYTATSAIADRTAYVA 175

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMA 185
           +K A+ S+TR++A++   +  IRVN +APG I D+   +K+      P ++RS       
Sbjct: 176 SKGAISSLTRAMAMDHAKE-GIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLRSDFNARAV 233

Query: 186 AYKFGEKWDIAMAALYLASDA 206
             + G   +IA A L+LASD 
Sbjct: 234 MDRMGTAEEIAEAMLFLASDR 254

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  133 bits (338), Expect = 6e-39
 Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 10/197 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S +
Sbjct: 48  VLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLS 107

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  VI+ +  G F+   EA+KY  +           G +IN+S+          +H +A
Sbjct: 108 DWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAA 160

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKF 189
           +K  +  +T +LALE+     IRVN I PG I +T   ++  A  E R+     +     
Sbjct: 161 SKGGMKLMTETLALEYAP-KGIRVNNIGPGAI-NTPINAEKFADPEQRADVESMIPMGYI 218

Query: 190 GEKWDIAMAALYLASDA 206
           GE  +IA  A +LAS  
Sbjct: 219 GEPEEIAAVAAWLASSE 235

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  133 bits (338), Expect = 6e-39
 Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 13/208 (6%)

Query: 2   GRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R       A   L    G+  +    DV   E+  +++E+    FGKLD +VNAA  N 
Sbjct: 52  SRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR 111

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             PAE+   + FR VIE++  GT+ +C EA   L++             IINI +     
Sbjct: 112 RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPS--------IINIGSLTVEE 163

Query: 121 ATWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
            T   I   +A+K  V S+T++LA EWG  Y IRVN IAPG  + T     +  +  +  
Sbjct: 164 VTMPNISAYAASKGGVASLTKALAKEWGR-YGIRVNVIAPGWYR-TKMTEAVFSDPEKLD 221

Query: 180 A-TDYMAAYKFGEKWDIAMAALYLASDA 206
                +   + G   D+   A++LAS+ 
Sbjct: 222 YMLKRIPLGRTGVPEDLKGVAVFLASEE 249

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  133 bits (336), Expect = 1e-38
 Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 10/200 (5%)

Query: 8   LRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
           L      L  LG+     +  DV   E    ++  T+   G+LD+LVN A      P  D
Sbjct: 60  LGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVD 119

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           ++   +  V+ +           AL+Y +           GG+I+N ++ L + A   Q 
Sbjct: 120 MTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-------GGVIVNNASVLGWRAQHSQS 172

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
           H +AAKA V ++TR  A+E   ++ +R+N ++P        + K +  E+  +     A 
Sbjct: 173 HYAAAKAGVMALTRCSAIEAV-EFGVRINAVSPSIA-RHKFLEKTSSSELLDRLASDEAF 230

Query: 187 YKFGEKWDIAMAALYLASDA 206
            +  E W++A    +LASD 
Sbjct: 231 GRAAEPWEVAATIAFLASDY 250

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  131 bits (333), Expect = 2e-38
 Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 18/206 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L S V            +  D+   E      E  +   G +D+LVN AA   L
Sbjct: 38  SRTQADLDSLVRECPG----IEPVCVDLGDWEA----TERALGSVGPVDLLVNNAAVALL 89

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F    E++      +     + L   G         G I+N+S+     A
Sbjct: 90  QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRA 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
                   + K A+D +T+ +ALE G  + IRVN + P  +  T+      +        
Sbjct: 143 VTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVV-MTSMGQATWSDPHKAKTM 200

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            + +   KF E   +  A L+L SD 
Sbjct: 201 LNRIPLGKFAEVEHVVNAILFLLSDR 226

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  133 bits (336), Expect = 2e-38
 Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 2   GRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGN 59
           GRR  VL +A   +    G     +  DV   +    +  +    F +LD+LVN A +  
Sbjct: 64  GRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNV 123

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
             VP E+++   +  ++  +  G F+    A + +K           GG IIN  +    
Sbjct: 124 PPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR------GGRIINNGSISAQ 177

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
           T        +A K A+  +T+S AL+    + I    I  G    T   ++++   +++ 
Sbjct: 178 TPRPNSAPYTATKHAITGLTKSTALDGR-MHDIACGQIDIGNA-ATDMTARMSTGVLQAN 235

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASD 205
               +AA        IA A +Y+AS 
Sbjct: 236 GE--VAAEPTIPIEHIAEAVVYMASL 259

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  133 bits (336), Expect = 2e-38
 Identities = 57/210 (27%), Positives = 84/210 (40%), Gaps = 15/210 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R    L      +   G  A  L GDV        +VE  +  FG LD    NA A   
Sbjct: 39  ARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGA 98

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           +     LS  G+R  ++ +    F+     +  +   G        GG +   S+ + +T
Sbjct: 99  MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG--------GGSLTFTSSFVGHT 150

Query: 121 ATWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEI 176
           A +  +   +A+KA +  + ++LA+E G    IRVN + PG   DT         A  E 
Sbjct: 151 AGFAGVAPYAASKAGLIGLVQALAVELGAR-GIRVNALLPGGT-DTPANFANLPGAAPET 208

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           R       A  +     +IA AALYLASD 
Sbjct: 209 RGFVEGLHALKRIARPEEIAEAALYLASDG 238

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  132 bits (334), Expect = 3e-38
 Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 16/208 (7%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNF 60
                   A     + G+ +   + ++   +     +      FG +D+ V  A      
Sbjct: 66  NSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQ 125

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLH 118
               +  + + +  +I +D  G +   H   K  KK G+G         +I  S  +   
Sbjct: 126 GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGS--------LIITSSISGKI 177

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 Q   + AKAA   + +SLA+EW      RVN I+PG I DT  ++  A +++++
Sbjct: 178 VNIPQLQAPYNTAKAACTHLAKSLAIEWAPF--ARVNTISPGYI-DTD-ITDFASKDMKA 233

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
           K        + G   ++    LYLAS+A
Sbjct: 234 KWWQLTPLGREGLTQELVGGYLYLASNA 261

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  132 bits (334), Expect = 3e-38
 Identities = 61/216 (28%), Positives = 84/216 (38%), Gaps = 21/216 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
           GR +T +      +   G  AI LE DV         V   +  FG LDI+V NA     
Sbjct: 59  GRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGV 118

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLH 118
             P +DL P  +   I ++  GTF+  H  + YLK+ G        GG I+ +S      
Sbjct: 119 WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG--------GGAIVVVSSINGTR 170

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
              T      +A KAA  +I + LALE G  + IRVN + PG I +T             
Sbjct: 171 TFTTPGATAYTATKAAQVAIVQQLALELG-KHHIRVNAVCPGAI-ETNISDNTKLRHEEE 228

Query: 179 KATDYMAAYK--------FGEKWDIAMAALYLASDA 206
            A                 G   D+A    +L S+ 
Sbjct: 229 TAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER 264

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  131 bits (332), Expect = 4e-38
 Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 22/217 (10%)

Query: 2   GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R+   L  A  +L    G+  + +  DV   E    VVES  + FG  DILVN A    
Sbjct: 38  ARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGS 97

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
                + +   ++   E+  +    +    +  ++  G        GG II+ ++     
Sbjct: 98  NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG--------GGAIIHNASICAVQ 149

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
             WY+   +  KAA+   +++LA E   D  IRVN I PG I  T    K A E  +   
Sbjct: 150 PLWYEPIYNVTKAALMMFSKTLATEVIKD-NIRVNCINPGLI-LTPDWIKTAKELTKDNG 207

Query: 181 TDYMAAYK-----------FGEKWDIAMAALYLASDA 206
            D+    +           F    ++A   ++L S+ 
Sbjct: 208 GDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSER 244

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  131 bits (332), Expect = 4e-38
 Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 11/204 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
            +     +  AA+   G  AIGLE +V   +    V+++ ++ FGK+ +LVN A G    
Sbjct: 44  LKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPK 103

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P  D+  + F    +++    F +   A  +++K G        GG I+NIS+       
Sbjct: 104 PF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG--------GGAILNISSMAGENTN 154

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
                  ++KAAV+ +TR++A + G    IRVN IAPG I  T  ++ +   EI      
Sbjct: 155 VRMASYGSSKAAVNHLTRNIAFDVGP-MGIRVNAIAPGAI-KTDALATVLTPEIERAMLK 212

Query: 183 YMAAYKFGEKWDIAMAALYLASDA 206
           +    + GE  DIA AAL+L S A
Sbjct: 213 HTPLGRLGEAQDIANAALFLCSPA 236

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  131 bits (332), Expect = 5e-38
 Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 12/195 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              + + G  A+  + DV       R+  +    FG +D+LVN A    L    +     
Sbjct: 69  AGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAV 128

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F  VI ++  GTF    EA + L+ GGR          IIN+S +            +AA
Sbjct: 129 FDRVIAVNLKGTFNTLREAAQRLRVGGR----------IINMSTSQVGLLHPSYGIYAAA 178

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA V+++T  L+ E      I VN +APGP   T    +   +E+R +        + G 
Sbjct: 179 KAGVEAMTHVLSKELRG-RDITVNAVAPGPT-ATDLFLEGKSDEVRDRFAKLAPLERLGT 236

Query: 192 KWDIAMAALYLASDA 206
             DIA A  +LA   
Sbjct: 237 PQDIAGAVAFLAGPD 251

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  131 bits (332), Expect = 6e-38
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 12/204 (5%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R   ++     +   G  A  +  D+   E A  V E  +    ++D+LVN A      P
Sbjct: 63  RTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAP 121

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
           AE++S   +R V+ ++    +++       +   G G+        I+ I++ L +    
Sbjct: 122 AEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGR--------IVTIASMLSFQGGR 173

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TD 182
                +A+K AV  +TR+LA EW     + VN +APG +  TA  + L  ++ R+   T 
Sbjct: 174 NVAAYAASKHAVVGLTRALASEWAG-RGVGVNALAPGYV-VTANTAALRADDERAAEITA 231

Query: 183 YMAAYKFGEKWDIAMAALYLASDA 206
            + A ++    D+   A++LASDA
Sbjct: 232 RIPAGRWATPEDMVGPAVFLASDA 255

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  130 bits (330), Expect = 6e-38
 Identities = 56/208 (26%), Positives = 80/208 (38%), Gaps = 16/208 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L  A   L      A  +  DV   E               + ILVN+A    L
Sbjct: 42  DREAAALDRAAQEL--GAAVAARIVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARL 98

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
             A +     +R V+ ++  G F       + +   G G         I+N+ +      
Sbjct: 99  HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGA--------IVNLGSMSGTIV 150

Query: 122 TWYQIHVS--AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRS 178
              Q   S  A+K AV  +TR+LA EW     +RVN +APG +  T    K+    E+  
Sbjct: 151 NRPQFASSYMASKGAVHQLTRALAAEWA-GRGVRVNALAPGYV-ATEMTLKMRERPELFE 208

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
              D     + GE  +IA AAL+LAS A
Sbjct: 209 TWLDMTPMGRCGEPSEIAAAALFLASPA 236

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  130 bits (330), Expect = 7e-38
 Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 17/208 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
               +  + +    A+ +  DV  + +    ++      G  D+LVN A    + P  ++
Sbjct: 41  AAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEV 100

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +    + +  ++    F     A +   + G         G IIN ++            
Sbjct: 101 TEEDLKQIYSVNVFSVFFGIQAASRKFDELGV-------KGKIINAASIAAIQGFPILSA 153

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRS 178
            S  K AV  +T++ A E        VN  APG +          + + ++     E   
Sbjct: 154 YSTTKFAVRGLTQAAAQELAP-KGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFK 212

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
           + +  +A  +     D+A    +LAS+ 
Sbjct: 213 EYSSSIALGRPSVPEDVAGLVSFLASEN 240

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  130 bits (330), Expect = 8e-38
 Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 15/193 (7%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
            I     + D+    + VR VE      G++D+LVN AA      A  +    +R V+E+
Sbjct: 48  AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEV 107

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +      +   A + ++K G        GG I+N+++     A       +A+K  + ++
Sbjct: 108 NLTAPMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNL 159

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKW 193
           TRSLAL+      IRVN +APG I  T  V +       PE  R    D  A  + G+  
Sbjct: 160 TRSLALDLA-PLRIRVNAVAPGAI-ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE 217

Query: 194 DIAMAALYLASDA 206
           ++A A L+LAS+ 
Sbjct: 218 EVAEAVLFLASEK 230

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  129 bits (328), Expect = 2e-37
 Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 14/190 (7%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L GD+R+   A  +  +     G+LDI+VN A         + +   +   + ++  
Sbjct: 68  DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVE 127

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
             F +C  A+  +   G        GG I+N+++                KAA+ S+T+ 
Sbjct: 128 APFRICRAAIPLMAAAG--------GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQC 179

Query: 142 LALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
           + ++      IR+N + P  +     +         P+   ++    +   +  E  DIA
Sbjct: 180 MGMDHAPQ-GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIA 238

Query: 197 MAALYLASDA 206
              L+LASDA
Sbjct: 239 DVVLFLASDA 248

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  129 bits (327), Expect = 2e-37
 Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 17/203 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
                   G+     + DV   +   + ++      G +  L+  A  + + PA +L+  
Sbjct: 55  TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHE 114

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-------ATLHYTATW 123
            F  V +++  G F  C    K   +  +        G I+  S              + 
Sbjct: 115 DFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSL 167

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
            Q+  +++KAA  ++ + LA EW     IRVN ++PG + +T   + +  ++IR      
Sbjct: 168 TQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASN 224

Query: 184 MAAYKFGEKWDIAMAALYLASDA 206
           +   +F +  ++   A+ L SD 
Sbjct: 225 IPLNRFAQPEEMTGQAILLLSDH 247

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  129 bits (327), Expect = 2e-37
 Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 25/219 (11%)

Query: 2   GRRKTVLRSAVAAL--HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            R    LR+A +AL     G        DV          E+     G   ILVN A   
Sbjct: 39  ARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQG 98

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
            +    + +   +   +++            L  L+              I+ +++ L  
Sbjct: 99  RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA--------DAAIVCVNSLLAS 150

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
               + +  SAA+A V ++ RS+A E+     +RVNGI  G + ++    +   E    +
Sbjct: 151 QPEPHMVATSAARAGVKNLVRSMAFEFAPK-GVRVNGILIGLV-ESGQWRRR-FEAREER 207

Query: 180 ATDYMAAYK------------FGEKWDIAMAALYLASDA 206
             D+                  G+  + A A L+LAS  
Sbjct: 208 ELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPL 246

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  128 bits (325), Expect = 3e-37
 Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 18/206 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R  + L S              +  D+   +      E  +   G +D+LVN AA   +
Sbjct: 38  TRTNSDLVSLAKECPG----IEPVCVDLGDWDA----TEKALGGIGPVDLLVNNAALVIM 89

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F     ++    F +     + +   G         G I+N+S+ + +  
Sbjct: 90  QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVT 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
               I  S+ K A+  +T+++A+E G  + IRVN + P  +  T    K+ A  E   K 
Sbjct: 143 FPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVV-LTDMGKKVSADPEFARKL 200

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
            +     KF E  D+  + L+L SD 
Sbjct: 201 KERHPLRKFAEVEDVVNSILFLLSDR 226

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  129 bits (326), Expect = 3e-37
 Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 12/207 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
             +  L   V  L  +G   +G++ DV K++D    V  T   + ++D+L  NA   + +
Sbjct: 39  LLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV 98

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  ++S   +  V+ ++    F      +  + K G         G+I+N ++      
Sbjct: 99  TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG--------KGVIVNTASIAGIRG 150

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSK 179
            +     + AK  +  +TRS+A  +G D  IR   + PG +K     G SK +   +R+ 
Sbjct: 151 GFAGAPYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTL 209

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
                 + +  E  DIA   ++LASD 
Sbjct: 210 TKLMSLSSRLAEPEDIANVIVFLASDE 236

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  129 bits (327), Expect = 3e-37
 Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 14/205 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNF 60
           GRR   L+   A +   G  A+ +  DV   +    +  +T+  FG++D+L N A  G  
Sbjct: 59  GRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAP 115

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            +P EDL+   ++ V++ +  G F+   EA + +K           GG IIN  +    +
Sbjct: 116 AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPR------GGRIINNGSISATS 169

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
              Y    +A K A+  +T+S +L+    + I    I  G   DT    K+     ++  
Sbjct: 170 PRPYSAPYTATKHAITGLTKSTSLDGR-VHDIACGQIDIGNA-DTPMAQKMKAGVPQADL 227

Query: 181 TDYMAAYKFGEKWDIAMAALYLASD 205
           +  +      +   +A A +Y+AS 
Sbjct: 228 SIKVE--PVMDVAHVASAVVYMASL 250

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  127 bits (322), Expect = 9e-37
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA+ +LG   + ++ DV +  D     +  I+ FG+ DILVN A    L+P ++L+  
Sbjct: 45  AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 104

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++   EI+    F+M    +  +K+ G         G IIN+++T ++       H  +
Sbjct: 105 QWKKTFEINVDSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYIS 156

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-F 189
            KAA    TR+LA + G    I VN IAP  +  TA     A   +     + + A    
Sbjct: 157 TKAANIGFTRALASDLGK-DGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRL 214

Query: 190 GEKWDIAMAALYLASDA 206
               D+  AA +LASD 
Sbjct: 215 QVPLDLTGAAAFLASDD 231

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  127 bits (322), Expect = 9e-37
 Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 14/200 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDL 67
           A    H+     + +  DV    D    + +T+  FG +D+LVN A     +        
Sbjct: 43  ARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTT 102

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               F  V+ ++  G F+ C   L ++   G         G+I+NI++     A   +  
Sbjct: 103 PVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRSA 154

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAA 186
            + +K AV  +T+S+A+++     IR N + PG I +T          E+R +    +  
Sbjct: 155 YTTSKGAVLQLTKSVAVDYAGS-GIRCNAVCPGMI-ETPMTQWRLDQPELRDQVLARIPQ 212

Query: 187 YKFGEKWDIAMAALYLASDA 206
            + G    +A A ++LA + 
Sbjct: 213 KEIGTAAQVADAVMFLAGED 232

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  128 bits (323), Expect = 1e-36
 Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R           L + G     +  D+     A R+ ++      +LDILVN A  ++ 
Sbjct: 60  ARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG 118

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              E    +G+  V++++    F    + L  L++    +    +   +INI +    +A
Sbjct: 119 AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAE----NPARVINIGSVAGISA 174

Query: 122 TWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRS 178
              Q +    +KAA+  ++R LA E      I VN IAPG    + T  +      +   
Sbjct: 175 MGEQAYAYGPSKAALHQLSRMLAKELV-GEHINVNVIAPGRFPSRMTRHI--ANDPQALE 231

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
             +  +   ++G   ++A  A+ LA  A
Sbjct: 232 ADSASIPMGRWGRPEEMAALAISLAGTA 259

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  128 bits (323), Expect = 1e-36
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 16/207 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L   V  + +     +    D R  +   +VV+  +   G+LDI+V  A        +D+
Sbjct: 61  LSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDI 120

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +P  FR V++I+  GT+         + +GGR       GG II IS+        + IH
Sbjct: 121 TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR-------GGSIILISSAAGMKMQPFMIH 173

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSK 179
            +A+K AV  + R+ A E G  ++IRVN + PGP+          TA    +      S 
Sbjct: 174 YTASKHAVTGLARAFAAELGK-HSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSH 232

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
                      E  DIA    +LASD 
Sbjct: 233 VLTPFLPDWVAEPEDIADTVCWLASDE 259

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  127 bits (322), Expect = 1e-36
 Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 16/201 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAE 65
            +    + + G  AI +  DV   E A  + + T+  FG +D LVN AA    +      
Sbjct: 47  EAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLL 106

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
            + P  ++  + ++  G         K + K G        GG I+N S+T    A  Y 
Sbjct: 107 TIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG--------GGAIVNQSST---AAWLYS 155

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
            +   AK  ++ +T+ L+ E G    IR+N IAPGPI DT       P+E+       + 
Sbjct: 156 NYYGLAKVGINGLTQQLSRELGG-RNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLP 213

Query: 186 AYKFGEKWDIAMAALYLASDA 206
             + G   D+    L+L SD 
Sbjct: 214 LSRMGTPDDLVGMCLFLLSDE 234

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  127 bits (321), Expect = 1e-36
 Identities = 35/205 (17%), Positives = 69/205 (33%), Gaps = 17/205 (8%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAE 65
            S   A       +          +   R+V++T+ H   +D +V+          +P E
Sbjct: 33  ASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLE 92

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
             S    R + E  S+   ++   A+  L+  G        G  +I I++++      Y 
Sbjct: 93  GTSEADIRQMFEALSIFPILLLQSAIAPLRAAG--------GASVIFITSSVGKKPLAYN 144

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKAT 181
                A+AA  ++  S A        I +  I P    +       +      E+R +  
Sbjct: 145 PLYGPARAATVALVESAAKTLSR-DGILLYAIGPNFF-NNPTYFPTSDWENNPELRERVD 202

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
             +   + G   ++     +LAS  
Sbjct: 203 RDVPLGRLGRPDEMGALITFLASRR 227

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  127 bits (322), Expect = 1e-36
 Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 11/198 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPN 70
           VAA+   G  A+ + GDV    D   +  +    FG+LD LVN A   ++    +++S  
Sbjct: 68  VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVE 127

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHV 128
               ++ ++  G+ +   EA++ + +   GQ     GG I+N+S  A +  +AT Y +  
Sbjct: 128 RIERMLRVNVTGSILCAAEAVRRMSRLYSGQ-----GGAIVNVSSMAAILGSATQY-VDY 181

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +A+KAA+D+ T  LA E      IRVN + PG I +T   +     +   +    +   +
Sbjct: 182 AASKAAIDTFTIGLAREVA-AEGIRVNAVRPGII-ETDLHASGGLPDRAREMAPSVPMQR 239

Query: 189 FGEKWDIAMAALYLASDA 206
            G   ++A A LYL S +
Sbjct: 240 AGMPEEVADAILYLLSPS 257

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  127 bits (321), Expect = 2e-36
 Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           +   +A++ + G  A     D+   E   ++V+  +  FG +D+L+ NA       P  +
Sbjct: 45  IDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPE 104

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-Q 125
           +    +  V++ +     +    AL +L    +    S     +I+  +   +T      
Sbjct: 105 IDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGPGA 161

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
               AAKA + ++ ++       D  +R N ++PG + DTA  +    +++R + ++ + 
Sbjct: 162 GLYGAAKAFLHNVHKNWVDFHTKD-GVRFNIVSPGTV-DTAFHADK-TQDVRDRISNGIP 218

Query: 186 AYKFGEKWDIAMAALYLASDA 206
             +FG   ++A A L+ AS  
Sbjct: 219 MGRFGTAEEMAPAFLFFASHL 239

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  126 bits (320), Expect = 2e-36
 Identities = 47/208 (22%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            ++  + ++  G  A+ ++ DV  R+     VE      G  D++VN A      P E +
Sbjct: 39  AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI 98

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +P     V  I+  G       A++  KK G        GG IIN  +   +        
Sbjct: 99  TPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAV 151

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRS 178
            S++K AV  +T++ A +      I VNG  PG +K           +  +        +
Sbjct: 152 YSSSKFAVRGLTQTAARDLAP-LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTA 210

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
           +    +   +  E  D+A    YLAS  
Sbjct: 211 EFAKRITLGRLSEPEDVAACVSYLASPD 238

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  127 bits (321), Expect = 2e-36
 Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 15/207 (7%)

Query: 3   RRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R       V  L  + GI A   +  V   E   ++V+  +  FG++D  +  A     
Sbjct: 55  SRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD 114

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHY 119
               D S   +  V+++D  GTF        + K+ G G    ++S  G I N       
Sbjct: 115 SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ---- 170

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                Q   + AKA    + RSLA EW  D+  RVN I+PG I DT  +S   P+E +  
Sbjct: 171 ----EQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYI-DTG-LSDFVPKETQQL 222

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
               +   + G   ++  A +Y ASDA
Sbjct: 223 WHSMIPMGRDGLAKELKGAYVYFASDA 249

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  127 bits (322), Expect = 3e-36
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPN 70
            A +   G  A+ L GD+     A  +V       G LDIL   A     +P  +DL+  
Sbjct: 92  KALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSE 151

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            F+    ++    F +  EA+  L KG            II  S+   Y  + + +  +A
Sbjct: 152 QFQQTFAVNVFALFWITQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAA 201

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMAAYKF 189
            KAA+ + +R LA +   +  IRVN +APGPI  TA  +S    ++   +        + 
Sbjct: 202 TKAAILNYSRGLAKQVA-EKGIRVNIVAPGPI-WTALQISGGQTQDKIPQFGQQTPMKRA 259

Query: 190 GEKWDIAMAALYLASD 205
           G+  ++A   +YLAS 
Sbjct: 260 GQPAELAPVYVYLASQ 275

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  127 bits (321), Expect = 3e-36
 Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 22/213 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           L      +       +  E DVR  +     V+S +   G+LDI+V NA  GN     + 
Sbjct: 64  LAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK 123

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
            S   +  +I+I+  G +      + ++  GGR       GG II  S+     A  +  
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR-------GGSIILTSSVGGLKAYPHTG 176

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKAT 181
           H  AAK  V  + R+  +E G  + IRVN + P  +      +        P+       
Sbjct: 177 HYVAAKHGVVGLMRAFGVELGQ-HMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPD 235

Query: 182 DYMAAYK--------FGEKWDIAMAALYLASDA 206
           D     +        + E  DI+ A L+ ASD 
Sbjct: 236 DMAPICQMFHTLPIPWVEPIDISNAVLFFASDE 268

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  127 bits (321), Expect = 3e-36
 Identities = 44/202 (21%), Positives = 73/202 (36%), Gaps = 16/202 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA   +G  A     DV   +  + +V++ +  FG +D LV  A    L    D +  
Sbjct: 66  ADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVE 125

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            F  VI I+  G ++    A   + + G        GG I+N+S+     A         
Sbjct: 126 DFDRVIAINLRGAWLCTKHAAPRMIERG--------GGAIVNLSSLAGQVAVGGTGAYGM 177

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-- 188
           +KA +  ++R  A E      IR N + P  + DT            +       +    
Sbjct: 178 SKAGIIQLSRITAAELR-SSGIRSNTLLPAFV-DTPMQQTAMAMFDGALGAGGARSMIAR 235

Query: 189 ----FGEKWDIAMAALYLASDA 206
                    ++A   ++L SD 
Sbjct: 236 LQGRMAAPEEMAGIVVFLLSDD 257

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  126 bits (319), Expect = 5e-36
 Identities = 40/209 (19%), Positives = 70/209 (33%), Gaps = 24/209 (11%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAE 65
                 + G  A+G+ GDVR  +D  R  E  +  FGK+D L+  A     +       E
Sbjct: 42  LRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPE 101

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           D     F  +  ++  G        L  L             G ++   +   +      
Sbjct: 102 DKIDAAFDDIFHVNVKGYIHAVKACLPALVSS---------RGSVVFTISNAGFYPNGGG 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKAT 181
              +A K AV  + R +A E      +RVNG+APG +       + +             
Sbjct: 153 PLYTATKHAVVGLVRQMAFELAPH--VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLA 210

Query: 182 DYMAAY----KFGEKWDIAMAALYLASDA 206
           D + +     +     +   A ++ A+  
Sbjct: 211 DMLKSVLPIGRMPALEEYTGAYVFFATRG 239

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  126 bits (318), Expect = 6e-36
 Identities = 45/215 (20%), Positives = 81/215 (37%), Gaps = 26/215 (12%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           L  A A++   G+ A     DV   E  +  V+S +  FGK+D L  NA       P +D
Sbjct: 44  LEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQD 103

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
              + F  V+ I+  G F +     + +             G I+N ++           
Sbjct: 104 YPSDDFARVLTINVTGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNMA 155

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------------- 172
               +K A+ ++T + AL+    Y IRVN I+PG +     + +                
Sbjct: 156 AYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFST 213

Query: 173 -PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            P+ +  +    +   ++G+  +I     +L  D 
Sbjct: 214 DPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDD 248

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  125 bits (317), Expect = 9e-36
 Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 23/207 (11%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VA L  LG   + ++ D+ K  + V + +  ++HFG LD +++ +         +++   
Sbjct: 63  VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQEL 122

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSA 130
           F  V  +++ G F +  + LK+ ++GGR          II  S+     T        + 
Sbjct: 123 FDKVFNLNTRGQFFVAQQGLKHCRRGGR----------IILTSSIAAVMTGIPNHALYAG 172

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSK 179
           +KAAV+   R+ A++ G    + VN IAPG +K              G   +  E+I   
Sbjct: 173 SKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEG 231

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
             +     + G   DI  A   L  + 
Sbjct: 232 LANMNPLKRIGYPADIGRAVSALCQEE 258

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  125 bits (316), Expect = 1e-35
 Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 22/206 (10%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ + +LG  AI ++ D+R+  + V++ +  + HFG LDI V+ +        +D++   
Sbjct: 60  VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE 119

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSA 130
           F  V  +++ G F +  EA ++L +GGR          I+  S+      +       S 
Sbjct: 120 FDRVFSLNTRGQFFVAREAYRHLTEGGR----------IVLTSSNTSKDFSVPKHSLYSG 169

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----------DTAGVSKLAPEEIRSKA 180
           +K AVDS  R  + + G D  I VN +APG                  +    E+ +  A
Sbjct: 170 SKGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMA 228

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                 ++ G   D+A    +L S  
Sbjct: 229 AHASPLHRNGWPQDVANVVGFLVSKE 254

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  125 bits (315), Expect = 1e-35
 Identities = 37/200 (18%), Positives = 57/200 (28%), Gaps = 25/200 (12%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSP 69
                                 E+   V+E   +   K+D  V AA G +    + D   
Sbjct: 50  ISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFL 109

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
              + +I+++    F   H   K L +GG            +   A+     T   I   
Sbjct: 110 KSVKGMIDMNLYSAFASAHIGAKLLNQGGL----------FVLTGASAALNRTSGMIAYG 159

Query: 130 AAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAA 186
           A KAA   I + LA E G         GI P  + DT    K   +      T    +A 
Sbjct: 160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTL-DTPTNRKYMSDANFDDWTPLSEVA- 217

Query: 187 YKFGEKWDIAMAALYLASDA 206
                         +  +  
Sbjct: 218 ---------EKLFEWSTNSD 228

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  125 bits (317), Expect = 1e-35
 Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 15/206 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L      +   G  A+    DVR       +V   +  FG+LD++V  A         +L
Sbjct: 65  LDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWEL 124

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   + TVI ++  GT+      +  + + G        GG I+ +S++    AT    H
Sbjct: 125 TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN-------GGSIVVVSSSAGLKATPGNGH 177

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-------DTAGVSKLAPEEIRSKA 180
            SA+K  + ++T +LA+E G  Y IRVN I P  ++           +    P  + S  
Sbjct: 178 YSASKHGLTALTNTLAIELGE-YGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFP 236

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
              +    F    ++A    +LA D 
Sbjct: 237 PMPVQPNGFMTADEVADVVAWLAGDG 262

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  126 bits (319), Expect = 1e-35
 Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 23/202 (11%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           + +A   + ++G  A+    DVR  +     VE  I  FG +DILVN A+   L    D 
Sbjct: 89  IYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT 148

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
                  ++ +++ GT++     + YLKK             I+NIS  L+    W++ H
Sbjct: 149 PTKRLDLMMNVNTRGTYLASKACIPYLKKSK--------VAHILNISPPLNLNPVWFKQH 200

Query: 128 V--SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              + AK  +      +A E+  +  I VN + P     TA +  L    I         
Sbjct: 201 CAYTIAKYGMSMYVLGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIE-------- 250

Query: 186 AYKFGEKWDI-AMAALYLASDA 206
                 K DI A AA  +    
Sbjct: 251 --SQCRKVDIIADAAYSIFQKP 270

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  125 bits (315), Expect = 2e-35
 Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 23/207 (11%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +        +D++P  
Sbjct: 71  VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSA 130
           F  V  I++ G F +  EA K+L+ GGR          +I + S T    A       S 
Sbjct: 131 FDRVFTINTRGQFFVAREAYKHLEIGGR----------LILMGSITGQAKAVPKHAVYSG 180

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSK 179
           +K A+++  R +A++   D  I VN +APG IK              G +    E     
Sbjct: 181 SKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYA 239

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
           A  +    + G   DIA    +LAS+ 
Sbjct: 240 AVQWSPLRRVGLPIDIARVVCFLASND 266

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  124 bits (314), Expect = 3e-35
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 21/195 (10%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           +   + DV   E+    VE T   +G++DILVN A      P        +R +I+++  
Sbjct: 55  SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVN 114

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G+++M    +  +   G         G IINI++   Y AT        +K A+  +TRS
Sbjct: 115 GSYLMAKYTIPVMLAIG--------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRS 166

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGE 191
           +A+++     IR N + PG I  T  V K A  E+           +           G 
Sbjct: 167 VAIDYAPK--IRCNAVCPGTI-MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGR 223

Query: 192 KWDIAMAALYLASDA 206
             ++A    +LASD 
Sbjct: 224 PEEVAEVVAFLASDR 238

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  124 bits (314), Expect = 3e-35
 Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 15/196 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ +   G  A+ +  D R  E   + +  T+   G LDILVN+A      P E+ +   
Sbjct: 73  VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVAD 132

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSA 130
           F  V+ ++    F+    A ++L  GGR          II I + L     W      SA
Sbjct: 133 FDEVMAVNFRAPFVAIRSASRHLGDGGR----------IITIGSNLAELVPWPGISLYSA 182

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KAA+  +T+ LA + G    I VN + PG   DT         +      + +A   +G
Sbjct: 183 SKAALAGLTKGLARDLGP-RGITVNIVHPGST-DTDMNPAD--GDHAEAQRERIATGSYG 238

Query: 191 EKWDIAMAALYLASDA 206
           E  DIA    +LA   
Sbjct: 239 EPQDIAGLVAWLAGPQ 254

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  123 bits (311), Expect = 5e-35
 Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 21/195 (10%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
              +E DV   +     ++     +G + +LVN A        E +S   +R +I+++  
Sbjct: 48  YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLF 107

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G +     A+ Y+ +             I+NIS+      T        +K AV  +T+S
Sbjct: 108 GYYYASKFAIPYMIRSR--------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKS 159

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGE 191
           +AL++     +R N + P  I DT  V K A  E+ S                     G+
Sbjct: 160 IALDYAPL--LRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGK 216

Query: 192 KWDIAMAALYLASDA 206
             ++A A  +LAS  
Sbjct: 217 PQEVASAVAFLASRE 231

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  123 bits (310), Expect = 5e-35
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 22/194 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
              ++ D+ K++D   V++         D +   A         D+     + V++++  
Sbjct: 46  LKFIKADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVW 103

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
            +          LK G            I+   +   + A       + +K A+  +T+S
Sbjct: 104 SSIYFIKGLENNLKVGAS----------IVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKS 153

Query: 142 LALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEK 192
           LAL+    Y IRVN + PG +         +  A    ++ +E + +        +  + 
Sbjct: 154 LALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQP 212

Query: 193 WDIAMAALYLASDA 206
            +IA   ++L SD 
Sbjct: 213 QEIAELVIFLLSDK 226

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  122 bits (310), Expect = 6e-35
 Identities = 56/197 (28%), Positives = 77/197 (39%), Gaps = 12/197 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A    LG  A     DV   ED  RVV      FG +D LVN A  +  +  E  S  
Sbjct: 42  GAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            FR V+EI+  G FI     +  +K  G        GG I+NIS+              A
Sbjct: 102 RFRKVVEINLTGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGA 153

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +K  V  +++  A+E G    IRVN + PG    T   ++                 + G
Sbjct: 154 SKWGVRGLSKLAAVELG-TDRIRVNSVHPGMT-YTPMTAET-GIRQGEGNYPNTPMGRVG 210

Query: 191 EK-WDIAMAALYLASDA 206
            +  +IA A + L SD 
Sbjct: 211 NEPGEIAGAVVKLLSDT 227

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  123 bits (311), Expect = 6e-35
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 17/205 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A A +  L      +E DV KR      ++  I+  G  D+L   A  + + PA D++  
Sbjct: 49  AQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDE 108

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +    ++++ G F+    A ++            + G+I+N ++           H SA
Sbjct: 109 EWDFNFDVNARGVFLANQIACRHFLASN-------TKGVIVNTASLAAKVGAPLLAHYSA 161

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKAT 181
           +K AV   T++LA E      IRVN + PG +K           A +  + PE +R++  
Sbjct: 162 SKFAVFGWTQALAREMAP-KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV 220

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
                 +  E  D+A   ++LASDA
Sbjct: 221 SLTPLGRIEEPEDVADVVVFLASDA 245

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  122 bits (309), Expect = 1e-34
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 18/196 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A+AA   L   A  +  DV +       V++ +  FG L +LVN A    +   ED +  
Sbjct: 46  AMAA--ELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 103

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++ +++++  G F+     +K +K+ G         G IINIS+      T      +A
Sbjct: 104 EWQRILDVNLTGVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTA 155

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K AV  +T+S ALE G    IRVN I PG +  T     +  +  +       A  +  
Sbjct: 156 TKFAVRGLTKSTALELG-PSGIRVNSIHPGLV-KTPMTDWVPEDIFQ------TALGRAA 207

Query: 191 EKWDIAMAALYLASDA 206
           E  +++   +YLASD 
Sbjct: 208 EPVEVSNLVVYLASDE 223

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  123 bits (311), Expect = 1e-34
 Identities = 56/213 (26%), Positives = 76/213 (35%), Gaps = 17/213 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L  A   +   G  A   E DVR R    R + + +  FGKLD++V  A          L
Sbjct: 59  LEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG--ICPLGAHL 116

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QI 126
               F    ++D VG     H AL YL  G     + S  G+I                 
Sbjct: 117 PVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGA 176

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKAT 181
             S AK  VDS T  LA +     +IR N I P  +            +  P+       
Sbjct: 177 GYSYAKQLVDSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRA 235

Query: 182 DYMAAY--------KFGEKWDIAMAALYLASDA 206
           D + A+         + E  DI+ A  +LASD 
Sbjct: 236 DALLAFPAMQAMPTPYVEASDISNAVCFLASDE 268

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  121 bits (307), Expect = 2e-34
 Identities = 37/214 (17%), Positives = 80/214 (37%), Gaps = 25/214 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R +  L+         G     + GD+ +     ++V + +   GK+D LV NA     
Sbjct: 35  ARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEP 91

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           +    ++  N ++ + +I+      +   AL  LKK         + G ++ +S+     
Sbjct: 92  VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKK---------TNGNVVFVSSDACNM 142

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--------KDTAGVSKLA 172
                    ++KAA++    +LA E   +  ++   +APG +        ++  G S ++
Sbjct: 143 YFSSWGAYGSSKAALNHFAMTLANE---ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMS 199

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            E+++          +  +    A     LA   
Sbjct: 200 AEQLK-MFRGLKENNQLLDSSVPATVYAKLALHG 232

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  121 bits (305), Expect = 3e-34
 Identities = 46/209 (22%), Positives = 73/209 (34%), Gaps = 22/209 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAA 57
           GR +  L      + S G P    I L  +    +    +     + FG+LD L+ NA+ 
Sbjct: 45  GRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASI 104

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
                P E L    F  V+ ++   TF++    L  LK+             I   S+++
Sbjct: 105 IGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE--------DASIAFTSSSV 156

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                        +K A + + ++LA E     A+R N I PG    T   ++  P+E  
Sbjct: 157 GRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGAT-RTGMRAQAYPDEN- 214

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDA 206
                           DI    LYL    
Sbjct: 215 --------PLNNPAPEDIMPVYLYLMGPD 235

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  120 bits (303), Expect = 5e-34
 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 14/191 (7%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
            + A+ L  D+  ++D   +V+  +   G L +LV+AAA N   PA +LS   +R V+ +
Sbjct: 42  SLGAVPLPTDLE-KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYL 100

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVD 136
                F++   A  ++ + G G+        ++ I +   +TA         + AK A+ 
Sbjct: 101 HLDVAFLLAQAAAPHMAEAGWGR--------VLFIGSVTTFTAGGPVPIPAYTTAKTALL 152

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDI 195
            +TR+LA EW     IRVN + PG + +T     L    E+    T  +   ++    +I
Sbjct: 153 GLTRALAKEWA-RLGIRVNLLCPGYV-ETEFTLPLRQNPELYEPITARIPMGRWARPEEI 210

Query: 196 AMAALYLASDA 206
           A  A  L  D 
Sbjct: 211 ARVAAVLCGDE 221

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  121 bits (306), Expect = 6e-34
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 13/195 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPN 70
              +   G+  + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++  
Sbjct: 89  KQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAE 148

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
                  I+    F +   AL +LK+G            IIN ++ + Y      I  SA
Sbjct: 149 QLEKTFRINIFSYFHVTKAALSHLKQGDV----------IINTASIVAYEGNETLIDYSA 198

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K A+ + TRSL+        IRVNG+APGPI  T  +     E+  S+    +   + G
Sbjct: 199 TKGAIVAFTRSLSQSLV-QKGIRVNGVAPGPI-WTPLIPSSFDEKKVSQFGSNVPMQRPG 256

Query: 191 EKWDIAMAALYLASD 205
           + +++A A +YLAS 
Sbjct: 257 QPYELAPAYVYLASS 271

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  121 bits (306), Expect = 6e-34
 Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           L   V  + +LG   I  + DVR  +     V+  +   G+LDI++ NAA  +       
Sbjct: 77  LAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNR 136

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           + P  +R +I+++  G +I    A+ ++  G R       GG I+  S+           
Sbjct: 137 MDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR-------GGSIVFTSSIGGLRGAENIG 189

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKAT 181
           +  A+K  +  + R++ALE G    IRVN + P  +      +        P+       
Sbjct: 190 NYIASKHGLHGLMRTMALELGP-RNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVE 248

Query: 182 DYMAAYK--------FGEKWDIAMAALYLASDA 206
           D+  A +        + E  DI+ A L+L SD 
Sbjct: 249 DFQVASRQMHVLPIPYVEPADISNAILFLVSDD 281

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  121 bits (306), Expect = 9e-34
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 21/212 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L+  V  +   G   I  + DVR       VV+  +  FG +DILV+    +       L
Sbjct: 95  LKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSL 154

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   +  +++ + +G +  C   L  + + G+       GG +I +S+T+       Q H
Sbjct: 155 TDQQWSDILQTNLIGAWHACRAVLPSMIERGQ-------GGSVIFVSSTVGLRGAPGQSH 207

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATD 182
            +A+K  V  +  SLA E G  + IRVN + PG +      +   +    P        D
Sbjct: 208 YAASKHGVQGLMLSLANEVGR-HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRED 266

Query: 183 YMAAYK--------FGEKWDIAMAALYLASDA 206
               +         + E  D++ A  +LASD 
Sbjct: 267 AAELFSQLTLLPIPWVEPEDVSNAVAWLASDE 298

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  120 bits (303), Expect = 1e-33
 Identities = 52/214 (24%), Positives = 83/214 (38%), Gaps = 20/214 (9%)

Query: 3   RRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN 59
                L ++ AA+         +    DV         V +T   FG++D    NA    
Sbjct: 45  VSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEG 104

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
              P E  +   F  V+ I+  G F+   + LK +++ G         G+++N ++    
Sbjct: 105 KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGI 156

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                Q   +AAK  V  +TR+ A+E+G  Y IR+N IAPG I  T  V     +     
Sbjct: 157 RGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAI-WTPMVENSMKQLDPEN 214

Query: 180 ATDYMAAYK-------FGEKWDIAMAALYLASDA 206
                  +        +GE  +IA    +L SD 
Sbjct: 215 PRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 248

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  118 bits (297), Expect = 7e-33
 Identities = 36/196 (18%), Positives = 65/196 (33%), Gaps = 17/196 (8%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            ++V  L   G  A+ L GD       +  ++        L  +V+  A  +L       
Sbjct: 62  HASVTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH-NASEWLAETPGEE 118

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
            + F  +  +  +  +++       L               I++IS  +    +   I  
Sbjct: 119 ADNFTRMFSVHMLAPYLINLHCEPLLTASE--------VADIVHISDDVTRKGSSKHIAY 170

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
            A KA ++S+T S A  +     ++VNGIAP  +              R+ A    A   
Sbjct: 171 CATKAGLESLTLSFAARFAPL--VKVNGIAPALL-MFQP---KDDAAYRANALAKSALGI 224

Query: 189 FGEKWDIAMAALYLAS 204
                 I  +  YL  
Sbjct: 225 EPGAEVIYQSLRYLLD 240

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  117 bits (295), Expect = 1e-32
 Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 14/196 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
              A+ +L   AI +  DV   +    V    +  FG+L  + + A       + +L   
Sbjct: 43  LAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  V+ ++  G+F++  +A + L++GG           ++   +       +   H +A
Sbjct: 103 AWEKVLRVNLTGSFLVARKAGEVLEEGGS----------LVLTGSVAG-LGAFGLAHYAA 151

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K  V  + R+LALE      +RVN + PG I  T   + L P     +        + G
Sbjct: 152 GKLGVVGLARTLALELAR-KGVRVNVLLPGLI-QTPMTAGL-PPWAWEQEVGASPLGRAG 208

Query: 191 EKWDIAMAALYLASDA 206
              ++A AAL+L S+ 
Sbjct: 209 RPEEVAQAALFLLSEE 224

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  117 bits (296), Expect = 1e-32
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 9/200 (4%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAED 66
              +A L  LG   I L  D+         V++ +  FG++D LVN A  A        D
Sbjct: 68  APVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLD 127

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           L P  F T++ ++  GT       LK +               IINI++      +  ++
Sbjct: 128 LKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARA-----SRSIINITSVSAVMTSPERL 182

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
               +KA + + ++ LAL       I V  + PG I  +   + ++ +      +  +  
Sbjct: 183 DYCMSKAGLAAFSQGLALRLAE-TGIAVFEVRPGII-RSDMTAAVSGKYDGLIESGLVPM 240

Query: 187 YKFGEKWDIAMAALYLASDA 206
            ++GE  DI      LA   
Sbjct: 241 RRWGEPEDIGNIVAGLAGGQ 260

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  117 bits (296), Expect = 1e-32
 Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 24/211 (11%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L + V  +  +G   +  + DVR RE     +++ ++  G+LDI+V  A     +     
Sbjct: 62  LAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG----IAPMSA 117

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL----HYTATW 123
             +G+  VI+++  G +     A+  L K G        GG I+ IS++       +A  
Sbjct: 118 GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT-------GGSIVLISSSAGLAGVGSADP 170

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRS 178
             +   AAK  V  + R  A        IRVN I P  +      +      LA     +
Sbjct: 171 GSVGYVAAKHGVVGLMRVYANLLAG-QMIRVNSIHPSGVETPMINNEFTREWLAKMAAAT 229

Query: 179 KATDYMAAY---KFGEKWDIAMAALYLASDA 206
                M      +     D+A A  +L SD 
Sbjct: 230 DTPGAMGNAMPVEVLAPEDVANAVAWLVSDQ 260

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  116 bits (293), Expect = 2e-32
 Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 12/204 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L   VA + + G   +    D R  ++    +    +    L++ +     N  
Sbjct: 38  RRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANVN 96

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  + +   FR V E+     F+   E+ + +   G+G+        I    AT     
Sbjct: 97  FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGK--------IFFTGATASLRG 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  ++AK  + ++ +S+A E         + I    + DTA V +   +     A 
Sbjct: 149 GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGV-DTAWVRERREQMFGKDAL 207

Query: 182 DYMAAYKFGEKWDIAMAALYLASD 205
                        +A A   L   
Sbjct: 208 ANPD--LLMPPAAVAGAYWQLYQQ 229

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  117 bits (295), Expect = 2e-32
 Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 17/203 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLS 68
            V            +  DV K ED   +V++TI   GKLDI+               +  
Sbjct: 55  KVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAG 114

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              F+ V++I+  G F++   A + +             G I+  ++   +TA     HV
Sbjct: 115 NEDFKRVMDINVYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHV 166

Query: 129 -SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A K AV  +T SL  E G +Y IRVN ++P  +  +  ++ +   +          A 
Sbjct: 167 YTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAA 224

Query: 188 ----KFGEKWDIAMAALYLASDA 206
                     D+A A  YLA D 
Sbjct: 225 NLKGTLLRAEDVADAVAYLAGDE 247

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  116 bits (293), Expect = 2e-32
 Identities = 42/209 (20%), Positives = 81/209 (38%), Gaps = 24/209 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAA 57
           GR +  LR   + ++           L+      E+  ++ +    ++ +LD ++ NA  
Sbjct: 43  GRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGL 102

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
              + P  + +P  ++ V++++   TF++    L  L K           G ++  S+++
Sbjct: 103 LGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD--------AGSLVFTSSSV 154

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                      +A+K A + + + LA E+     +RVN I PG    TA  +   P E  
Sbjct: 155 GRQGRANWGAYAASKFATEGMMQVLADEYQQR--LRVNCINPGGT-RTAMRASAFPTED- 210

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDA 206
                     K     DI    L+L  D 
Sbjct: 211 --------PQKLKTPADIMPLYLWLMGDD 231

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  114 bits (289), Expect = 8e-32
 Identities = 43/205 (20%), Positives = 72/205 (35%), Gaps = 18/205 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A+A +   G+ A+    D+        +       FG +DILVN A    + P E     
Sbjct: 42  ALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLE 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +I ++    F     AL  ++            G IINI++      +  +    A
Sbjct: 102 SWDKIIALNLSAVFHGTRLALPGMRARN--------WGRIINIASVHGLVGSTGKAAYVA 153

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKAT 181
           AK  V  +T+ + LE  T   +  N I PG +          D A       +       
Sbjct: 154 AKHGVVGLTKVVGLETAT-SNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLA 212

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
           +   +  F     +    L+L S+A
Sbjct: 213 EKQPSLAFVTPEHLGELVLFLCSEA 237

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  114 bits (287), Expect = 1e-31
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDS 80
            + +     ++ D V      +    K+D ++  A G                 + +   
Sbjct: 50  IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI 109

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
             + I  H A K+LK+GG           +    A      T   I    AK AV  + +
Sbjct: 110 WTSTISSHLATKHLKEGGL----------LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ 159

Query: 141 SLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           SLA +  G         + P  + DT    K  PE   S          +     +    
Sbjct: 160 SLAGKNSGMPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETF 209

Query: 200 LYLASDA 206
               +  
Sbjct: 210 HDWITGN 216

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  112 bits (283), Expect = 4e-31
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 24/204 (11%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRR   L+     L   G   IG+  D+   ED      + +   G  +++++ A    
Sbjct: 33  MGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE 89

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P    +    R V+E + V T ++  + ++ + +          GG++ N+ ++    
Sbjct: 90  FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER---------GGVLANVLSSAAQV 140

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
               +    A+K  +     SL  E   D  +R+  + P  I  +         E     
Sbjct: 141 GKANESLYCASKWGMRGFLESLRAELK-DSPLRLVNLYPSGI-RS---------EFWDNT 189

Query: 181 TDYMAAYKFGEKWDIAMAALYLAS 204
                +  F    D A   L    
Sbjct: 190 DHVDPS-GFMTPEDAAAYMLDALE 212

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  112 bits (284), Expect = 4e-31
 Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 17/200 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
           A AA  S+G  A  +  D+        +        G +DILVN  A            D
Sbjct: 43  AKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVN-NASIVPFVAWD---D 98

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           +  + +R +I+++  GTFI+       ++  G+        G +I+I++   +  T    
Sbjct: 99  VDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMA 151

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
              AAK  V   TR+LA E G  Y I  N + PG I ++ GV      E         A 
Sbjct: 152 AYVAAKGGVIGFTRALATELGK-YNITANAVTPGLI-ESDGVKASPHNEAFGFVEMLQAM 209

Query: 187 YKFGEKWDIAMAALYLASDA 206
              G+   IA    +LASD 
Sbjct: 210 KGKGQPEHIADVVSFLASDD 229

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  113 bits (285), Expect = 4e-31
 Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 28/210 (13%)

Query: 9   RSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
               AALH        + ++ DV  ++         ++HFG+LDILVN A    +   ++
Sbjct: 45  VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN 101

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
                +   ++I+ V      +  L Y+ K   G      GGIIIN+S+         Q 
Sbjct: 102 -----WEKTLQINLVSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQP 151

Query: 127 HVSAAKAAVDSITRSLALEWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
              A+K  +   TRS AL    +     +R+N I PG + +TA +  +  EE   +  +Y
Sbjct: 152 VYCASKHGIVGFTRSAALA--ANLMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEY 208

Query: 184 MAAYK-------FGEKWDIAMAALYLASDA 206
               K         +   IA   + L  D 
Sbjct: 209 KDHIKDMIKYYGILDPPLIANGLITLIEDD 238

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  113 bits (284), Expect = 5e-31
 Identities = 44/206 (21%), Positives = 76/206 (36%), Gaps = 20/206 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R    LR+    + + G  A     D+   +         +   G+ D+LV NA  G F
Sbjct: 60  ARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWF 119

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P   + P  +  +I ++    +++       +    RG         IINIS+     
Sbjct: 120 GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGH--------IINISSLAGKN 171

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                   +A+K  ++ +  S A E    + +RV+ +APG +  T     L+ ++    A
Sbjct: 172 PVADGAAYTASKWGLNGLMTSAAEELRQ-HQVRVSLVAPGSV-RTEFGVGLSAKKSALGA 229

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                     E  DIA     LA+ A
Sbjct: 230 ---------IEPDDIADVVALLATQA 246

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  112 bits (282), Expect = 8e-31
 Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 17/201 (8%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAE 65
           V  + S G  A  +  ++        +  S  N         K DIL+N A        E
Sbjct: 49  VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIE 108

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           + +   F  ++ +++   F +  +AL  L+   R          IINIS+     +    
Sbjct: 109 ETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSR----------IINISSAATRISLPDF 158

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
           I  S  K A++++T +LA + G    I VN I PG +K       L+   ++  AT   A
Sbjct: 159 IAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA 217

Query: 186 AYKFGEKWDIAMAALYLASDA 206
             + GE  DIA  A +LAS  
Sbjct: 218 FNRLGEVEDIADTAAFLASPD 238

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  112 bits (282), Expect = 1e-30
 Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 16/195 (8%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIE 77
                  +      ++   ++E+  + +G++D+LV+         P +  +   +R  +E
Sbjct: 43  AFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVE 102

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
              +  F + +     +KK   G         II I++   +         ++A+A   +
Sbjct: 103 ALQIRPFALVNAVASQMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACT 154

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPI------KDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           +  +L+ E G  Y I V  I P  +                  E  +      A  + G 
Sbjct: 155 LANALSKELGE-YNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGT 213

Query: 192 KWDIAMAALYLASDA 206
           + ++     +LAS +
Sbjct: 214 QKELGELVAFLASGS 228

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  112 bits (283), Expect = 1e-30
 Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 22/212 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L   VA +   G   I  + DV+ R      V    +  G +DI +  A  + +    ++
Sbjct: 59  LAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEV 118

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               +  VI  +  GTF         + K           G I+ +S+ L ++A + Q  
Sbjct: 119 ESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN--------YGRIVTVSSMLGHSANFAQAS 170

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATD 182
             ++K  V  +T+  A +    Y I VN +APG I      +      + P+  +    D
Sbjct: 171 YVSSKWGVIGLTKCAAHDLVG-YGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKD 229

Query: 183 YMAAY--------KFGEKWDIAMAALYLASDA 206
             + +         F +  ++  A L+L  +A
Sbjct: 230 VESVFASLHLQYAPFLKPEEVTRAVLFLVDEA 261

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  111 bits (280), Expect = 1e-30
 Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 20/194 (10%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
                    DV K++     ++   N   +LD+L N A         D     +   + +
Sbjct: 49  YPGIQTRVLDVTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNL 104

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDS 137
           +    ++M    L  +             G IIN+S+          +   S  KAAV  
Sbjct: 105 NVRSMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIG 156

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEK 192
           +T+S+A ++     IR N + PG + DT  + +       PEE R+         +F   
Sbjct: 157 LTKSVAADFIQQ-GIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATA 214

Query: 193 WDIAMAALYLASDA 206
            +IAM  +YLASD 
Sbjct: 215 EEIAMLCVYLASDE 228

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  111 bits (281), Expect = 2e-30
 Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 16/190 (8%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76
           S       + GD+ K E A R+V   I  FG++D LVN A      P  +++   +   +
Sbjct: 65  SADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNL 124

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAA 134
            ++  G F +   A   + K G         G I++I+ +L             S  K  
Sbjct: 125 GVNVAGFFHITQRAAAEMLKQG--------SGHIVSITTSLVDQPMVGMPSALASLTKGG 176

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           ++++TRSLA+E+     +RVN ++PG I  T     + P E  S         + GE  D
Sbjct: 177 LNAVTRSLAMEFS-RSGVRVNAVSPGVI-KTP----MHPAETHSTLAGLHPVGRMGEIRD 230

Query: 195 IAMAALYLAS 204
           +  A LYL  
Sbjct: 231 VVDAVLYLEH 240

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  109 bits (276), Expect = 5e-30
 Identities = 33/204 (16%), Positives = 64/204 (31%), Gaps = 20/204 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L        + G     +  D+    D  R+    +  +G +D LVN A     
Sbjct: 40  SRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               DL+   F   +  +  GTF +       +++   G         I  I++     A
Sbjct: 100 GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGH--------IFFITSVAATKA 151

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
             +      +K     +  ++ L       +R+  + PG +  T    K+  +E+++   
Sbjct: 152 FRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAV-YTPMWGKV-DDEMQALM- 207

Query: 182 DYMAAYKFGEKWDIAMAALYLASD 205
                       DIA   +     
Sbjct: 208 --------MMPEDIAAPVVQAYLQ 223

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  110 bits (277), Expect = 5e-30
 Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 19/210 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           GR    + + VA L  LG    IG++ DV  R     +    +  FG +D++   A    
Sbjct: 41  GRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFP 100

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P   ++P     +  ++  GTF      L  L   G G+        ++  S+    T
Sbjct: 101 DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGR--------VVLTSSI---T 149

Query: 121 ATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                     H  A KAA     R+ A+E    + I VN I PG I  T G+ +   EE 
Sbjct: 150 GPITGYPGWSHYGATKAAQLGFMRTAAIELAP-HKITVNAIMPGNI-MTEGLLEN-GEEY 206

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            +     + A   G   DI   A +LA+  
Sbjct: 207 IASMARSIPAGALGTPEDIGHLAAFLATKE 236

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  110 bits (277), Expect = 6e-30
 Identities = 42/211 (19%), Positives = 75/211 (35%), Gaps = 23/211 (10%)

Query: 12  VAALHSL-GIPAIGLEGDVRKREDAV----RVVESTINHFGKLDILVNAA---------- 56
           VA L++     A+  +GD+      +     +++ +   FG+ D+LVN A          
Sbjct: 53  VAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLP 112

Query: 57  -AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 115
                              +   ++V    +     +   +GG  ++ + S   ++N+  
Sbjct: 113 GDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS---VVNLCD 169

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +           + AK A+  +TR+ ALE      IRVN +APG       + +   EE
Sbjct: 170 AMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEE 228

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            R K               IA A  +L S  
Sbjct: 229 YRRKV---PLGQSEASAAQIADAIAFLVSKD 256

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  110 bits (277), Expect = 7e-30
 Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 21/199 (10%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
               +    D+ K  +   ++    + FG  DILVN A   F+   ED     +  +I +
Sbjct: 75  SGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAV 134

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +   +F     A+  +KK G         G IINI++     A+ ++    AAK  +  +
Sbjct: 135 NLSSSFHTIRGAIPPMKKKG--------WGRIINIASAHGLVASPFKSAYVAAKHGIMGL 186

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK---------- 188
           T+++ALE      + VN I PG +  T  V K  P++ R++                   
Sbjct: 187 TKTVALEVAE-SGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTK 244

Query: 189 -FGEKWDIAMAALYLASDA 206
            F     +A  ALYLA D 
Sbjct: 245 KFITVEQVASLALYLAGDD 263

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  109 bits (275), Expect = 1e-29
 Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 19/206 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
                   G+  +    D+ K E    +V++ +   G++DILVN A        ED    
Sbjct: 46  RAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  ++ ++    F     AL ++KK G G+        IINI++     A+  +    A
Sbjct: 106 KWDAILALNLSAVFHGTAAALPHMKKQGFGR--------IINIASAHGLVASANKSAYVA 157

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKA- 180
           AK  V   T+  ALE      I  N I PG ++           A  + +  E    +  
Sbjct: 158 AKHGVVGFTKVTALETAG-QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL 216

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
           ++   + +F     +   A++LASDA
Sbjct: 217 SEKQPSLQFVTPEQLGGTAVFLASDA 242

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  108 bits (273), Expect = 2e-29
 Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 17/202 (8%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
            A      P      DV       +V +  +    +LD LVNAA    +   + LS   +
Sbjct: 39  QAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDW 98

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
           +    ++  G F +  + +   ++          GG I+ +++   +T         A+K
Sbjct: 99  QQTFAVNVGGAFNLFQQTMNQFRRQR--------GGAIVTVASDAAHTPRIGMSAYGASK 150

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYM 184
           AA+ S+  S+ LE      +R N ++PG            +    +        +    +
Sbjct: 151 AALKSLALSVGLELAG-SGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGI 209

Query: 185 AAYKFGEKWDIAMAALYLASDA 206
              K     +IA   L+LASD 
Sbjct: 210 PLGKIARPQEIANTILFLASDL 231

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  108 bits (273), Expect = 2e-29
 Identities = 48/211 (22%), Positives = 81/211 (38%), Gaps = 21/211 (9%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG---- 58
              T + +       +      ++ DV K+ED  ++VE  ++HFGK+D L+N A      
Sbjct: 40  SDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFE 99

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT- 116
              LV   D   + +  +I+ +    F +    +  ++K   G+        IIN     
Sbjct: 100 RKKLV---DYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGR--------IINYGFQG 148

Query: 117 -LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
                   Y+   +AAK  + S+T+++A E    Y I  N + PG I           +E
Sbjct: 149 ADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAE-YGITANMVCPGDI-IGEMKEAT-IQE 205

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            R          + G   DIA    +L  D 
Sbjct: 206 ARQLKEHNTPIGRSGTGEDIARTISFLCEDD 236

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  108 bits (272), Expect = 2e-29
 Identities = 39/207 (18%), Positives = 71/207 (34%), Gaps = 23/207 (11%)

Query: 2   GRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
            R K  L      +          I L  D+     A   ++     +G +DILVN AA 
Sbjct: 38  ARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVN-AAA 96

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
            F+  +     + FR ++EI+ +  + +     + +K    G         I N+++   
Sbjct: 97  MFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGY--------IFNVASRAA 148

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                      + K A+  +  SL  E      IRV  + PG + +T         ++  
Sbjct: 149 KYGFADGGIYGSTKFALLGLAESLYRELA-PLGIRVTTLCPGWV-NT---------DMAK 197

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASD 205
           KA       +  +  D+      L + 
Sbjct: 198 KAGTPFKDEEMIQPDDLLNTIRCLLNL 224

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  107 bits (270), Expect = 6e-29
 Identities = 44/218 (20%), Positives = 77/218 (35%), Gaps = 23/218 (10%)

Query: 1   MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
             R +  L +A + + SL  G     + GD+R+  D  R+ E      G  DILV +  G
Sbjct: 37  FSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFE-KARDLGGADILVYSTGG 95

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
                  +L    +     + +     +   A + + + G         G ++ I +   
Sbjct: 96  PRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG--------WGRMVYIGSVTL 147

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------ 172
                     +  +  V  + R+LALE      + VN + P  I  T  V  LA      
Sbjct: 148 LRPWQDLALSNIMRLPVIGVVRTLALELAPH-GVTVNAVLPSLI-LTDRVRSLAEERARR 205

Query: 173 ----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                EE        +   + G+  ++A    +LAS+ 
Sbjct: 206 SGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEK 243

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  108 bits (271), Expect = 6e-29
 Identities = 49/218 (22%), Positives = 84/218 (38%), Gaps = 24/218 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    + +AV  L + G    G   DV   ++    V + +  FG + ILVN+A  N  
Sbjct: 55  ARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG 114

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL----KKGGRGQASSSSGGIIINISATL 117
               DL    +  V++ +  G F +  E L+         GR          I+NI++T 
Sbjct: 115 GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGR----------IVNIASTG 164

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGV 168
                 Y    +A+K  V   T+S+  E      I VN + PG +         +  A  
Sbjct: 165 GKQGVMYAAPYTASKHGVVGFTKSVGFELAK-TGITVNAVCPGYVETPMAERVREGYARH 223

Query: 169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
             +  +E+  +    +   ++    ++A    YL +DA
Sbjct: 224 WGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDA 261

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  107 bits (269), Expect = 9e-29
 Identities = 44/221 (19%), Positives = 79/221 (35%), Gaps = 30/221 (13%)

Query: 2   GRRKTVLRSAVAALHSLGIPAI--GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
           GRR+  +   +  + +    AI   +  D+   +    V+E     + K+DIL+N     
Sbjct: 41  GRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKVDILINNLGIF 96

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
             V   D+    +  + E++ +    +    LK + +   G+        +I I++    
Sbjct: 97  EPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGR--------VIFIASEAAI 148

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
             +    H SA K    S++RSLA        + VN I PG    T GV  +      ++
Sbjct: 149 MPSQEMAHYSATKTMQLSLSRSLAELTTG-TNVTVNTIMPGST-LTEGVETMLNSLYPNE 206

Query: 180 ATDYMAAYK--------------FGEKWDIAMAALYLASDA 206
                 A K                   +IA    +L+S  
Sbjct: 207 QLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPL 247

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  106 bits (268), Expect = 9e-29
 Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 17/191 (8%)

Query: 19  GIPAIGLEGDV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77
            +       DV     ++ ++++   +    +DIL+N A    ++             I 
Sbjct: 54  KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAG---ILDDHQ-----IERTIA 105

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           I+  G        L +  K   G      GGII NI +   + A       SA+KAAV S
Sbjct: 106 INFTGLVNTTTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQVPVYSASKAAVVS 160

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIA 196
            T SLA        +    I PG    T  V    +  ++  +  + + ++         
Sbjct: 161 FTNSLAKLAPI-TGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCG 218

Query: 197 MAALYLASDAV 207
              +       
Sbjct: 219 QNFVKAIEANK 229

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  106 bits (267), Expect = 2e-28
 Identities = 40/217 (18%), Positives = 73/217 (33%), Gaps = 25/217 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST-INHFGKLDILVNAAAGNF 60
           GR    LR       SLG   + +  D  +  +   + E       G+LD+LVN A    
Sbjct: 36  GRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGV 95

Query: 61  LV-------PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 113
                       +   + +  +  +   G +       + +   G         G+I+ I
Sbjct: 96  QTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG--------QGLIVVI 147

Query: 114 S--ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171
           S   +L Y    + +     KAA D +    A E    + +    + PG ++       +
Sbjct: 148 SSPGSLQYM---FNVPYGVGKAACDKLAADCAHELR-RHGVSCVSLWPGIVQTELLKEHM 203

Query: 172 APEEIRSKAT--DYMAAYKFGEK-WDIAMAALYLASD 205
           A EE+        + +A+   E         + LA+D
Sbjct: 204 AKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD 240

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  106 bits (267), Expect = 3e-28
 Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 22/205 (10%)

Query: 17  SLGIPAIGLEGDVRKRE----DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---- 68
                A+  + D+            ++ S    FG+ D+LVN A+  +  P         
Sbjct: 71  ERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDN 130

Query: 69  ------PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
                       +I  +++  F++     +  K        +SS   I+N+   +     
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKG--TNPNCTSSNLSIVNLCDAMVDQPC 188

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
                 +  K A+  +T+S ALE    Y IRVNG+APG       +     EE + K   
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPVAM----GEEEKDKWRR 243

Query: 183 YMAAYKF-GEKWDIAMAALYLASDA 206
            +   +       IA A ++L S +
Sbjct: 244 KVPLGRREASAEQIADAVIFLVSGS 268

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  106 bits (266), Expect = 4e-28
 Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 30/221 (13%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AG 58
            R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A    G
Sbjct: 53  ARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG 112

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL----KKGGRGQASSSSGGIIINIS 114
                  +L+   +  V+E +  G F +  + LK      +  GR          I+NI+
Sbjct: 113 GATA---ELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGR----------IVNIA 159

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDT 165
           +T       +    SA+K  V   T++L LE      I VN + PG +         +  
Sbjct: 160 STGGKQGVVHAAPYSASKHGVVGFTKALGLELAR-TGITVNAVCPGFVETPMAASVREHY 218

Query: 166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           + + +++ EE   + T  +   ++ +  ++A    YL    
Sbjct: 219 SDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 259

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  106 bits (266), Expect = 4e-28
 Identities = 32/221 (14%), Positives = 70/221 (31%), Gaps = 22/221 (9%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN------ 54
                  +++ ++ + +  +        V        +V +   H+G+ D+LVN      
Sbjct: 58  RPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 117

Query: 55  --------AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                          V   +        +   +++  + +       +           +
Sbjct: 118 PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGT 175

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
              IIN+   +           + AK A++ +TRS ALE      IRVNG+ PG      
Sbjct: 176 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD 234

Query: 167 GVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDA 206
            +    P  +       +  Y+      +++   ++L S  
Sbjct: 235 DM----PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK 271

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  105 bits (265), Expect = 6e-28
 Identities = 54/214 (25%), Positives = 78/214 (36%), Gaps = 27/214 (12%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-- 58
            R    L S  A L        IG+  DV           + ++ FG LD++    AG  
Sbjct: 72  ARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCA-NAGIF 130

Query: 59  --NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
               L     ++P     V++++  GT       L  L   GRG+        +I  S+ 
Sbjct: 131 PEARLD---TMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGR--------VILTSSI 179

Query: 117 LHYTATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
              T          H  A+KAA     R+ A+E      + VN I PG I  T G+  + 
Sbjct: 180 ---TGPVTGYPGWSHYGASKAAQLGFMRTAAIELAP-RGVTVNAILPGNI-LTEGLVDM- 233

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            EE  S     +     G   DI   A +LA+D 
Sbjct: 234 GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDE 267

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  106 bits (266), Expect = 6e-28
 Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 22/221 (9%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---- 56
                  +++ ++ + +  +        V        +V +   H+G+ D+LVN A    
Sbjct: 95  RPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 154

Query: 57  ----------AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                          V   +        +   +++  + +       +           +
Sbjct: 155 PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGT 212

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
              IIN+   +           + AK A++ +TRS ALE      IRVNG+ PG      
Sbjct: 213 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD 271

Query: 167 GVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDA 206
            +    P  +       +  Y+      +++   ++L S  
Sbjct: 272 DM----PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK 308

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  105 bits (264), Expect = 7e-28
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 11/164 (6%)

Query: 2   GRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R K  L+  V+    LG   A  + G +     A + V       G LD+L+     N 
Sbjct: 59  ARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT 118

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            +       +  R  +E++ +   ++   AL  LK+           G I+ +S+     
Sbjct: 119 SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKV 169

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIK 163
           A       SA+K A+D    S+  E+      + +     G I 
Sbjct: 170 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID 213

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  104 bits (261), Expect = 8e-28
 Identities = 39/189 (20%), Positives = 60/189 (31%), Gaps = 24/189 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEI 78
            I ++G+    E    ++E T +     ++D +   A G     A           +I+ 
Sbjct: 44  NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 103

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
               + I    A  +LK GG           +    A      T   I    AKAAV  +
Sbjct: 104 SVWSSAIAAKLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHL 153

Query: 139 TRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           T SLA +  G      V  I P  + DT    K  P    S          +     I+ 
Sbjct: 154 TSSLAAKDSGLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISE 203

Query: 198 AALYLASDA 206
             L   ++ 
Sbjct: 204 HLLKWTTET 212

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  101 bits (253), Expect = 5e-27
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 16/142 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           +  +  D+   +   ++ E      GK+D +V+A       P  +L+P      I     
Sbjct: 36  SGDVTVDITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLG 91

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G   +    +  L   G               +  +           + A  AV +  +S
Sbjct: 92  GQINLVLLGIDSLNDKGS----------FTLTTGIMMEDPIVQGASAAMANGAVTAFAKS 141

Query: 142 LALEWGTDYAIRVNGIAPGPIK 163
            A+E      IR+N ++P  ++
Sbjct: 142 AAIEMPRG--IRINTVSPNVLE 161

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  100 bits (252), Expect = 2e-26
 Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 23/210 (10%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG---- 58
              T L +      + GI  +  +GDV+  ED   +V++ ++ FG++DILVN  AG    
Sbjct: 38  PASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVN-NAGITRD 96

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISAT 116
             ++    +S   +  V+  +    ++      K +  +K G+          IINI++ 
Sbjct: 97  TLML---KMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGK----------IINITSI 143

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                   Q + +A+KA +   T+S+A E+     I  N +APG I  T     L P+++
Sbjct: 144 AGIIGNAGQANYAASKAGLIGFTKSIAKEFAA-KGIYCNAVAPGII-KTDMTDVL-PDKV 200

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           +    + +   +FG   ++A    +LASD 
Sbjct: 201 KEMYLNNIPLKRFGTPEEVANVVGFLASDD 230

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  100 bits (252), Expect = 2e-26
 Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              K    + V  + + G+ +  ++ +V   ++   +++  ++ FG LD+LVN  AG   
Sbjct: 36  AGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN-NAGITR 94

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N L+    +    +  VI+ +  G F    +A   +  ++ G           IIN+S+
Sbjct: 95  DNLLM---RMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGA----------IINLSS 141

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q +  A KA V  +T+S A E  +   I VN +APG I  +     L  +E
Sbjct: 142 VVGAVGNPGQANYVATKAGVIGLTKSAARELAS-RGITVNAVAPGFI-VSDMTDAL-SDE 198

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           ++ +    +   +FG+  DIA    +LASD 
Sbjct: 199 LKEQMLTQIPLARFGQDTDIANTVAFLASDK 229

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  100 bits (251), Expect = 3e-26
 Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 23/211 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              +      V  +  LG  AI +  DV   ED   +V+ T++ FG++DILVN  AG   
Sbjct: 36  AGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVN-NAGVTK 94

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N L+    +    + TVI  +  G F+      +++  ++ GR          I+NI++
Sbjct: 95  DNLLM---RMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGR----------IVNIAS 141

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +  T    Q +  AAKA V  +T++ A E  +   I VN IAPG I  T     L  E 
Sbjct: 142 VVGVTGNPGQANYVAAKAGVIGLTKTSAKELAS-RNITVNAIAPGFI-ATDMTDVL-DEN 198

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           I+++    + A +FGE  DIA A  + ASD 
Sbjct: 199 IKAEMLKLIPAAQFGEAQDIANAVTFFASDQ 229

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  100 bits (252), Expect = 3e-26
 Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 23/211 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              +       AA    G+   G   +V        +VEST+  FG L++LVN  AG   
Sbjct: 59  ATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVN-NAGITQ 117

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
               +    +  + +  VI+ +    F +    L+ +   +GGR          I+NI++
Sbjct: 118 DQLAM---RMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGR----------IVNITS 164

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q++ +AAKA V  +TR+LA E G+   I VN +APG I DT     L P+E
Sbjct: 165 VVGSAGNPGQVNYAAAKAGVAGMTRALAREIGS-RGITVNCVAPGFI-DTDMTKGL-PQE 221

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            ++     +   + G   DIA A  +LAS  
Sbjct: 222 QQTALKTQIPLGRLGSPEDIAHAVAFLASPQ 252

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  100 bits (252), Expect = 4e-26
 Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 23/211 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
            R +    S V  + S G  + G  GDV K+E+   V+   +     +DILVN  AG   
Sbjct: 75  SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVN-NAGITR 133

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N  +    +  + +  V+  +    F +     K +   + GR          IINIS+
Sbjct: 134 DNLFL---RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGR----------IINISS 180

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +  T    Q + S++KA V   T+SLA E  +   I VN IAPG I  +    K+  E+
Sbjct: 181 IVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS-RNITVNAIAPGFI-SSDMTDKI-SEQ 237

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           I+      + A + G   ++A  A +L+SD 
Sbjct: 238 IKKNIISNIPAGRMGTPEEVANLACFLSSDK 268

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 99.6 bits (249), Expect = 6e-26
 Identities = 30/205 (14%), Positives = 60/205 (29%), Gaps = 20/205 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVV-----ESTINHFGKLDILVNAAAGNFLVPA- 64
             A L + G     +   + +    +  +              L + VN    + L+   
Sbjct: 38  IEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGL 97

Query: 65  -EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            E LS       + + S+         L  ++            G               
Sbjct: 98  AEALSRGQQPAAVIVGSIAATQPGAAELPMVEAML--------AGDEARAIELAEQQG-Q 148

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKAT 181
             +  + +K AV  + R   ++W     +R+N +APG + +T  +      P    S   
Sbjct: 149 THLAYAGSKYAVTCLARRNVVDWA-GRGVRLNVVAPGAV-ETPLLQASKADPRYGESTRR 206

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
                 +  E  ++A A  +L    
Sbjct: 207 FVAPLGRGSEPREVAEAIAFLLGPQ 231

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 98.3 bits (246), Expect = 1e-25
 Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 23/211 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              +        ++   G  A GL  ++   E               +DILVN  AG   
Sbjct: 36  ATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVN-NAGITR 94

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N ++    +S + +++VI  +    F M  E ++ +  K+ GR          II+I +
Sbjct: 95  DNLMM---RMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGR----------IISIGS 141

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q +  AAKA V   ++SLA E  +   I VN +APG I  T    KL  +E
Sbjct: 142 VVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVAS-RNITVNVVAPGFI-ATDMTDKL-TDE 198

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            +S     + + + GE  DIA A  +LAS+ 
Sbjct: 199 QKSFIATKIPSGQIGEPKDIAAAVAFLASEE 229

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 97.2 bits (243), Expect = 6e-25
 Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 19/199 (9%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDL 67
           +    +LG      EG+V   +   +  +      G++D+LVN  AG            +
Sbjct: 55  LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVN-NAGITRDVVFR---KM 110

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   ++ VI+ +    F +  + +  + + G G+        IINIS+       + Q +
Sbjct: 111 TREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGR--------IINISSVNGQKGQFGQTN 162

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            S AKA +   T SLA E  T   + VN ++PG I  T  V  +   ++  K    +   
Sbjct: 163 YSTAKAGIHGFTMSLAQEVAT-KGVTVNTVSPGYI-GTDMVKAI-RPDVLEKIVATIPVR 219

Query: 188 KFGEKWDIAMAALYLASDA 206
           + G   +I     +LAS+ 
Sbjct: 220 RLGSPDEIGSIVAWLASEE 238

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 96.1 bits (240), Expect = 8e-25
 Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 27/185 (14%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L++  A L      A+ L GDVR+  D  R V +    FG+L  LVN A    +
Sbjct: 36  ARDEKRLQALAAELEG----ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVM 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P  +L+   +R V++ +  G F+    A+  L + G G         I+N+ +      
Sbjct: 92  KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGT--------IVNVGSLAGKNP 143

Query: 121 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI------KDTAGVSKL 171
                 Y    +A+K  +  +  +  L+   +  +RV  + PG +             KL
Sbjct: 144 FKGGAAY----NASKFGLLGLAGAAMLDLR-EANVRVVNVLPGSVDTGFAGNTPGQAWKL 198

Query: 172 APEEI 176
            PE++
Sbjct: 199 KPEDV 203

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 97.0 bits (242), Expect = 1e-24
 Identities = 42/200 (21%), Positives = 75/200 (37%), Gaps = 11/200 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLS 68
           A+A    LG  A  +  +V   +  +  +E+          +V          +   D S
Sbjct: 69  ALAD--ELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGS 126

Query: 69  P---NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           P    GF   I++   GT+ +       +         +   G ++  ++   Y     Q
Sbjct: 127 PADMGGFTKTIDLYLNGTYNVARLVAASIAA--AEPRENGERGALVLTASIAGYEGQIGQ 184

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              +AAKA V  +T + A +      IRVN IAPG +  T  +  +  E +   A +   
Sbjct: 185 TAYAAAKAGVIGLTIAAARDLS-SAGIRVNTIAPGTM-KTPIMESVGEEALAKFAANIPF 242

Query: 186 AYKFGEKWDIAMAALYLASD 205
             + G   + A AA +L ++
Sbjct: 243 PKRLGTPDEFADAAAFLLTN 262

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 95.6 bits (239), Expect = 2e-24
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 23/203 (11%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAE 65
            A A    LG    G+  +V   E    V+++  + FG +DILVN  AG    N L+   
Sbjct: 45  GAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVN-NAGITRDNLLM--- 100

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATW 123
            +    +  ++E +    F +    L+ +  K+ GR          IIN+ + +      
Sbjct: 101 RMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGR----------IINVGSVVGTMGNA 150

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
            Q + +AAKA V   T+S+A E  +   + VN +APG I +T     L  +E R+     
Sbjct: 151 GQANYAAAKAGVIGFTKSMAREVAS-RGVTVNTVAPGFI-ETDMTKAL-NDEQRTATLAQ 207

Query: 184 MAAYKFGEKWDIAMAALYLASDA 206
           + A + G+  +IA A  +LAS  
Sbjct: 208 VPAGRLGDPREIASAVAFLASPE 230

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 95.6 bits (239), Expect = 2e-24
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 40/213 (18%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLV- 62
           +        +  + A  +  DV       R     + H G+LD +V+  AG    NF   
Sbjct: 37  IEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH-YAGITRDNFHWK 95

Query: 63  -PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--- 118
            P ED     +  V+ ++  G+F++   A + +++   G         I+  ++ ++   
Sbjct: 96  MPLED-----WELVLRVNLTGSFLVAKAASEAMREKNPGS--------IVLTASRVYLGN 142

Query: 119 -----YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 173
                Y         +A+ A V  +TR+LALE G  + IRVN +APG I +T   +K+ P
Sbjct: 143 LGQANY---------AASMAGVVGLTRTLALELGR-WGIRVNTLAPGFI-ETRMTAKV-P 190

Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           E++R KA       + G+  ++A AAL+L SD 
Sbjct: 191 EKVREKAIAATPLGRAGKPLEVAYAALFLLSDE 223

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 96.1 bits (240), Expect = 2e-24
 Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 26/210 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
                     VAA+ + G  A  ++ DV +  +   +  + I  +G+LD+LVN  AG   
Sbjct: 60  ASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVN-NAGITR 118

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
              L+    +  + +++V++++  G F+    A K +  ++ GR          IINI++
Sbjct: 119 DTLLL---RMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGR----------IINIAS 165

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q + SAAKA V  +T+++A E  +   I VN +APG I  T   S+LA E+
Sbjct: 166 VVGEMGNPGQANYSAAKAGVIGLTKTVAKELAS-RGITVNAVAPGFI-ATDMTSELAAEK 223

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           +       +   ++GE  ++A    +LA+D
Sbjct: 224 LLEV----IPLGRYGEAAEVAGVVRFLAAD 249

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 94.9 bits (237), Expect = 2e-24
 Identities = 39/207 (18%), Positives = 68/207 (32%), Gaps = 29/207 (14%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R    L      L    G+       DV K E      +  +  FG +D++V  A   +
Sbjct: 33  ARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY 92

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHY 119
               E+LS   F  +IE++ +G +      L  LK+ G        G  ++     +   
Sbjct: 93  FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG--------GLALVTTSDVSARL 144

Query: 120 TATW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                 Y     + K A  ++ R+  +E   +  +R   + PG + DT            
Sbjct: 145 IPYGGGY----VSTKWAARALVRTFQIE---NPDVRFFELRPGAV-DT---------YFG 187

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLAS 204
                      + +  +IA A   L  
Sbjct: 188 GSKPGKPKEKGYLKPDEIAEAVRCLLK 214

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 95.2 bits (238), Expect = 3e-24
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 23/202 (11%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
           A    +  G+ A G+E ++   E   +  E   N    +DILVN  AG       +    
Sbjct: 48  AEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVN-NAGITRDKLFL---R 103

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWY 124
           +S   +  V++++  GTF++   +L+ +  ++ GR          I+NIS+ + +T    
Sbjct: 104 MSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGR----------IVNISSVVGFTGNVG 153

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q++ S  KA +   T+SLA E      + VN +APG I +T   + L  EEI+ K  + +
Sbjct: 154 QVNYSTTKAGLIGFTKSLAKELAP-RNVLVNAVAPGFI-ETDMTAVL-SEEIKQKYKEQI 210

Query: 185 AAYKFGEKWDIAMAALYLASDA 206
              +FG   ++A   L+L S+ 
Sbjct: 211 PLGRFGSPEEVANVVLFLCSEL 232

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 95.5 bits (238), Expect = 3e-24
 Identities = 36/219 (16%), Positives = 65/219 (29%), Gaps = 23/219 (10%)

Query: 1   MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN----HFGKLDILVN 54
             R +++LR     L +    +  +    D+       R++ +          +  +L+N
Sbjct: 39  SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLIN 98

Query: 55  AAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 111
            AA                       ++      +    L   +              ++
Sbjct: 99  NAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP------GLSKTVV 152

Query: 112 NISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT----AG 167
           NIS+              A KAA D + + LA E   + ++RV   APGP+ D       
Sbjct: 153 NISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE---EPSVRVLSYAPGPL-DNDMQQLA 208

Query: 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                  E+RSK     +     +    A   L L    
Sbjct: 209 RETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKD 247

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 94.9 bits (237), Expect = 4e-24
 Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-- 58
           G+ +             G P +  L  ++ + E A  +V       G LD LVN  AG  
Sbjct: 33  GQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVN-NAGIT 91

Query: 59  --NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINIS 114
               LV    +    +  V+E +    F    EA+K +   + GR          I+NI+
Sbjct: 92  RDTLLV---RMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGR----------IVNIT 138

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
           + +       Q +  A+KA +   TR++A E+     I VN +APG I +T    +L P+
Sbjct: 139 SVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQ-RGITVNAVAPGFI-ETEMTERL-PQ 195

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           E++      + A +FG   ++A A  +L S+ 
Sbjct: 196 EVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEK 227

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 94.9 bits (237), Expect = 4e-24
 Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 19/204 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAG----NFLV 62
           L    +            + DV +   A  ++E     F +   ++V+ A G     FL+
Sbjct: 51  LGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA-GITQDEFLL 109

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
               +S + +  VI ++  GTF++   A + L   G         G IINIS+ +     
Sbjct: 110 ---HMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCR-------GSIINISSIVGKVGN 159

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
             Q + +A+KA V  +T++ A E G  + IR N + PG I  T    K+ P+++  K T+
Sbjct: 160 VGQTNYAASKAGVIGLTQTAARELGR-HGIRCNSVLPGFI-ATPMTQKV-PQKVVDKITE 216

Query: 183 YMAAYKFGEKWDIAMAALYLASDA 206
            +     G+  D+A    +LAS+ 
Sbjct: 217 MIPMGHLGDPEDVADVVAFLASED 240

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 94.1 bits (235), Expect = 5e-24
 Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 24/211 (11%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG---- 58
           R           + + G  AI   GDV K  D   ++++ I+ +G +D++VN  AG    
Sbjct: 34  RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVN-NAGITRD 92

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISAT 116
             L+    +  + +  VI+++  G F+    A K +  K+ GR          IINI++ 
Sbjct: 93  TLLI---RMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGR----------IINIASV 139

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
           +       Q + +AAKA V   +++ A E  +   I VN + PG I  +   +KL  E++
Sbjct: 140 VGLIGNIGQANYAAAKAGVIGFSKTAAREGAS-RNINVNVVCPGFI-ASDMTAKL-GEDM 196

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLA-SDA 206
             K    +   + G+  ++A    +LA S A
Sbjct: 197 EKKILGTIPLGRTGQPENVAGLVEFLALSPA 227

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 94.1 bits (235), Expect = 8e-24
 Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 23/202 (11%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
                  LG        ++  R+   ++ E        +DILVN  AG       V    
Sbjct: 64  LKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVN-NAGITRDGLFV---R 119

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWY 124
           +    +  V+ ++      +  E +  +  ++ GR          IINI++ +       
Sbjct: 120 MQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGR----------IINITSIVGVVGNPG 169

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  AAKA +   +++LA E  +   I VN IAPG I  +A   KL  E+ +      +
Sbjct: 170 QTNYCAAKAGLIGFSKALAQEIAS-RNITVNCIAPGFI-KSAMTDKL-NEKQKEAIMAMI 226

Query: 185 AAYKFGEKWDIAMAALYLASDA 206
              + G   +IA A +YLASD 
Sbjct: 227 PMKRMGIGEEIAFATVYLASDE 248

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 93.8 bits (234), Expect = 1e-23
 Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 18/199 (9%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDL 67
           +      G        DV   E   R  E  +  FGK+D+L+N  AG       +    +
Sbjct: 67  LMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLIN-NAGITRDATFM---KM 122

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   +  V+  D    F +  + +  + +   G+        I+NI +       + Q +
Sbjct: 123 TKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGR--------IVNIGSVNGSRGAFGQAN 174

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            ++AKA +   T++LALE      I VN ++PG +  TA V  +  + + +K    +   
Sbjct: 175 YASAKAGIHGFTKTLALETAK-RGITVNTVSPGYL-ATAMVEAVPQDVLEAKILPQIPVG 232

Query: 188 KFGEKWDIAMAALYLASDA 206
           + G   ++A    +L SD 
Sbjct: 233 RLGRPDEVAALIAFLCSDD 251

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 92.2 bits (230), Expect = 3e-23
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 23/191 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIE 77
             G+E DV   +   R   +   H G +++LV+  AG     FL+    ++   F  VI 
Sbjct: 55  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS-NAGLSADAFLM---RMTEEKFEKVIN 110

Query: 78  IDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
            +  G F +   A + +   K GR          +I I +         Q + +A+KA V
Sbjct: 111 ANLTGAFRVAQRASRSMQRNKFGR----------MIFIGSVSGLWGIGNQANYAASKAGV 160

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
             + RS+A E      +  N +APG I DT     L  E I+  A  ++ A + G   ++
Sbjct: 161 IGMARSIARELSK-ANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEV 217

Query: 196 AMAALYLASDA 206
           A    +LAS+ 
Sbjct: 218 AGVVSFLASED 228

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 92.2 bits (230), Expect = 4e-23
 Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 10/173 (5%)

Query: 34  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93
           D  + ++       ++DILV  A G      ++L+   F+  I+   +    +    L  
Sbjct: 67  DLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 126

Query: 94  LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 153
           +K+ G G+        I+ I++    +        ++A+ A+    ++L+ E    Y I 
Sbjct: 127 MKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP-YGIT 177

Query: 154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           VN +APG   +T  V +L  EE + +    +   +  +  +IA    +L S+ 
Sbjct: 178 VNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK 229

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 91.9 bits (229), Expect = 5e-23
 Identities = 41/197 (20%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLS 68
                LG        DV    DA   +      FG +  LVN A        L  +   +
Sbjct: 46  EPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHA 105

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
            + F   + ++ +GTF M   A + + +      +    G+I+N ++   +     Q   
Sbjct: 106 LDSFARTVAVNLIGTFNMIRLAAEVMSQ--GEPDADGERGVIVNTASIAAFDGQIGQAAY 163

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +A+K  V ++T   A E    + IRV  IAPG   DT  ++ + P++++      +    
Sbjct: 164 AASKGGVAALTLPAARELA-RFGIRVVTIAPGIF-DTPMMAGM-PQDVQDALAASVPFPP 220

Query: 189 -FGEKWDIAMAALYLAS 204
             G   + A    ++  
Sbjct: 221 RLGRAEEYAALVKHICE 237

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 91.5 bits (228), Expect = 7e-23
 Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 22/203 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L +         I +     D+ K       V+  + +   +D LV+AAA    
Sbjct: 35  GRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARD 88

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              E  S   +   ++++ +    +  + L  L+            G +I I++      
Sbjct: 89  TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA---------SGCVIYINSGAGNGP 139

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  +A+K A+  +  +   E   +  IRV+ ++PGP  +T  +  L   +  +   
Sbjct: 140 HPGNTIYAASKHALRGLADAFRKEEA-NNGIRVSTVSPGPT-NTPMLQGLMDSQGTN--- 194

Query: 182 DYMAAYKFGEKWDIAMAALYLAS 204
                  + E  +IA A  ++  
Sbjct: 195 --FRPEIYIEPKEIANAIRFVID 215

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 91.1 bits (227), Expect = 1e-22
 Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 23/191 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIE 77
            + ++ D+   E   +  +      G +++L+   AG      L+    +S   F +V+E
Sbjct: 61  FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA-NAGVTKDQLLM---RMSEEDFTSVVE 116

Query: 78  IDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
            +  GTF +   A + +   K GR          ++ IS+ +    +  Q + +A+KA +
Sbjct: 117 TNLTGTFRVVKRANRAMLRAKKGR----------VVLISSVVGLLGSAGQANYAASKAGL 166

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
               RSLA E G+   I  N +APG + DT     L  +E R+     +   ++    +I
Sbjct: 167 VGFARSLARELGS-RNITFNVVAPGFV-DTDMTKVL-TDEQRANIVSQVPLGRYARPEEI 223

Query: 196 AMAALYLASDA 206
           A    +LASD 
Sbjct: 224 AATVRFLASDD 234

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 90.1 bits (224), Expect = 5e-22
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 8/156 (5%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L  AV  L   G  A G+  DVR  ++ VR+ +      G +D++ + A      P   +
Sbjct: 68  LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQM 127

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           + + +R VI+ID  G+       L  L + G        GG I   ++            
Sbjct: 128 NHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGT 180

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
              AK  V  +  +LA E      I V+ + P  ++
Sbjct: 181 YGVAKYGVVGLAETLAREVK-PNGIGVSVLCPMVVE 215

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 88.9 bits (221), Expect = 9e-22
 Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 12/199 (6%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAED-- 66
           A    LG   +    DV   +D    +      FG++D+ VN A    A       +   
Sbjct: 51  AQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQT 110

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
            +   F+ V++++ +GTF +       + +           G+IIN ++   +     Q 
Sbjct: 111 HTLEDFQRVLDVNLMGTFNVIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQA 168

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             SA+K  +  +T  +A +      IRV  IAPG    T  ++ L PE++ +     +  
Sbjct: 169 AYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLF-GTPLLTSL-PEKVCNFLASQVPF 225

Query: 187 YK-FGEKWDIAMAALYLAS 204
               G+  + A     +  
Sbjct: 226 PSRLGDPAEYAHLVQAIIE 244

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 88.5 bits (220), Expect = 1e-21
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 32/222 (14%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAED 66
           L +A   +  + I    +  D+   E   + +   +      +D LV  A    L P   
Sbjct: 21  LEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG---LGPQTK 77

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG--------------------QASSSS 106
           +       V+ ++  G   +    L  LKKG +                       +  +
Sbjct: 78  V----LGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA 133

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           G      +   H       +  + +K A+    R  A  WG +  +R+N IAPG   +T 
Sbjct: 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGAT-ETP 191

Query: 167 GVSK-LAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDA 206
            +   L           ++       E  ++A    +L S A
Sbjct: 192 LLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPA 233

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 87.9 bits (219), Expect = 2e-21
 Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 27/202 (13%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
             +  ++L         ++  +E+      + I+    LDILV  A G       +    
Sbjct: 51  LKSLGNALKDNYTIEVCNLANKEE----CSNLISKTSNLDILVCNA-GITSDTLAI---R 102

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWY 124
           +    F  VI+I+    FI+  EA+K +  K+ GR          IINIS+ +       
Sbjct: 103 MKDQDFDKVIDINLKANFILNREAIKKMIQKRYGR----------IINISSIVGIAGNPG 152

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  A+KA +  +T+SL+ E  T   I VN +APG I  +    KL  E+ R      +
Sbjct: 153 QANYCASKAGLIGMTKSLSYEVAT-RGITVNAVAPGFI-KSDMTDKL-NEKQREAIVQKI 209

Query: 185 AAYKFGEKWDIAMAALYLASDA 206
               +G   D+A A  +LAS+ 
Sbjct: 210 PLGTYGIPEDVAYAVAFLASNN 231

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 87.6 bits (218), Expect = 2e-21
 Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 19/207 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR   LR+    L + G     LE DV  R+     V ST+   G LDILVN A    L
Sbjct: 38  ARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLL 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P ED     +  +I+ + +G   M   AL +L +           G ++ +S+      
Sbjct: 98  GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---------KGTVVQMSSIAGRVN 148

Query: 121 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
              A  Y     A K  V++ + +L  E   +  +RV  I PG   DT     +     +
Sbjct: 149 VRNAAVY----QATKFGVNAFSETLRQEVT-ERGVRVVVIEPGTT-DTELRGHITHTATK 202

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLAS 204
                 ++  +  +  DIA A  Y  +
Sbjct: 203 EMYEQRISQIRKLQAQDIAEAVRYAVT 229

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 86.9 bits (216), Expect = 4e-21
 Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 9/198 (4%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLS 68
             +  LG  A     DV         ++      G L I+VN A    A   L      S
Sbjct: 45  DVVADLGDRARFAAADVTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFS 103

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              FR +++I+ VG+F +   A + + K      ++   G+IIN ++   +     Q   
Sbjct: 104 LAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAY 163

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           SA+K  V  +T  +A +    + IRV  IAPG   DT  ++ L PEE R+     +    
Sbjct: 164 SASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLF-DTPLLASL-PEEARASLGKQVPHPS 220

Query: 189 -FGEKWDIAMAALYLASD 205
             G   +    A+++  +
Sbjct: 221 RLGNPDEYGALAVHIIEN 238

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 85.4 bits (212), Expect = 2e-20
 Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 13/208 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            R    +    A   S G P   I    D+   ED + +  +  +    +DI +N A   
Sbjct: 63  ARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA 122

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-H 118
                   S +G++ +  ++ +   I   EA + +K+  R        G IINI++   H
Sbjct: 123 RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE--RNVDD----GHIININSMSGH 176

Query: 119 YTATWYQIHV-SAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                   H  SA K AV ++T  L  E       IR   I+PG + +T   +    ++ 
Sbjct: 177 RVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV-ET-QFAFKLHDKD 234

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLAS 204
             KA       K  +  D+A A +Y+ S
Sbjct: 235 PEKAAATYEQMKCLKPEDVAEAVIYVLS 262

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 83.8 bits (208), Expect = 7e-20
 Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 19/163 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR+  + +    +   G  A+    DV  R       ++ ++ +G++D+LVN A    L
Sbjct: 35  ARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P   +  + +  +I+++  G        L  ++    GQ        IINI +      
Sbjct: 95  SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQ--------IINIGSIGALSV 146

Query: 121 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
              A  Y     A K AV +I+  L  E      IRV  + PG
Sbjct: 147 VPTAAVY----CATKFAVRAISDGLRQE---STNIRVTCVNPG 182

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 83.0 bits (206), Expect = 8e-20
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 11/201 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAED 66
            V  L   G   I +EGDV + ED  R V         L  +V+AA    A   L     
Sbjct: 30  VVLDLRREGEDLIYVEGDVTREEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGP 88

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
                FR V+E++ +GTF +   A   +++           G+I+N ++   +     Q 
Sbjct: 89  HGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQR--GVIVNTASVAAFEGQIGQA 146

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             +A+K  V ++T   A E    + IRV  +APG   DT  +  L PE+ ++     +  
Sbjct: 147 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLF-DTPLLQGL-PEKAKASLAAQVPF 203

Query: 187 YK-FGEKWDIAMAALYLASDA 206
               G   + A   L++  + 
Sbjct: 204 PPRLGRPEEYAALVLHILENP 224

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 84.4 bits (209), Expect = 1e-19
 Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 5/163 (3%)

Query: 3   RRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R+  +  A+A L +   G   +G++ DV  RE      +     FG + IL N A  N 
Sbjct: 40  IRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL 99

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P E+ S + +  ++ ++  G        +  + +  R +A    GG ++N ++   + 
Sbjct: 100 FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVE--RVKAGEQKGGHVVNTASMAAFL 157

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
           A       +  K AV  ++ SL       Y I V+ + PG +K
Sbjct: 158 AAGSPGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLCPGLVK 199

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 82.0 bits (203), Expect = 7e-19
 Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 9/195 (4%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  + + G  A+    +V   + A  ++++ +  FG LD+LVN A         + S   
Sbjct: 78  VDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEE 137

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F  VI +   G F     A  Y +  G  +A  +  G IIN S+      +  Q + SAA
Sbjct: 138 FDAVIAVHLKGHFATMRHAAAYWR--GLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAA 195

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA + ++T   A E G  Y + VN IAP     T     +  E + ++       +    
Sbjct: 196 KAGIATLTLVGAAEMGR-YGVTVNAIAPS--ARTRMTETVFAEMMATQD----QDFDAMA 248

Query: 192 KWDIAMAALYLASDA 206
             +++   ++L S  
Sbjct: 249 PENVSPLVVWLGSAE 263

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 80.9 bits (200), Expect = 2e-18
 Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 27/187 (14%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           +  A  + + +  + L  DV+ +    R ++  I   G++D+L++ A      PAE  +P
Sbjct: 51  AGFARDNDVDLRTLEL--DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTP 108

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WY 124
             F  + +I+ + T  +   AL ++++   G         +I IS++     T      Y
Sbjct: 109 EQFAELYDINVLSTQRVNRAALPHMRRQKHGL--------LIWISSSSSAGGTPPYLAPY 160

Query: 125 QIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKA 180
                AAKAA+D+I    A E   WG    I  + I PG     T   +     +  ++ 
Sbjct: 161 ----FAAKAAMDAIAVQYARELSRWG----IETSIIVPGAFTSGTNHFAHSGVPDDHARQ 212

Query: 181 TDYMAAY 187
            +Y A  
Sbjct: 213 AEYEAGP 219

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 78.4 bits (194), Expect = 5e-18
 Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 21/169 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF- 60
           GRR+  L+  +     LG      + DVR R     ++ S    +  +DILVN A     
Sbjct: 31  GRRQERLQ-ELKD--ELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALG 87

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HY 119
           + PA   S   + T+I+ ++ G   M    L  + +   G         IINI +T   +
Sbjct: 88  MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGH--------IINIGSTAGSW 139

Query: 120 T---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
                  Y     A KA V   + +L  +     A+RV  I PG +  T
Sbjct: 140 PYAGGNVY----GATKAFVRQFSLNLRTDL-HGTAVRVTDIEPGLVGGT 183

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 77.6 bits (192), Expect = 6e-18
 Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 22/162 (13%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GRR   L      + +  +PA     D+    +A  ++E      G LD+LV+A      
Sbjct: 29  GRRAGALAELAREVGARALPA-----DLADELEAKALLE----EAGPLDLLVHAVGKAGR 79

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +   +    ++    +         LK+ +     +         +   A   Y  
Sbjct: 80  ASVREAGRDLVEEMLAAHLLTAA----FVLKHARFQKGAR--------AVFFGAYPRYVQ 127

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
                  +AAK A+++   +   E      + +  +    + 
Sbjct: 128 VPGFAAYAAAKGALEAYLEAARKELL-REGVHLVLVRLPAVA 168

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 78.9 bits (195), Expect = 9e-18
 Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 24/195 (12%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  +   G  A+     V   E   ++V++ ++ FG++D++VN A          +S   
Sbjct: 59  VEEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED 115

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  +  +   G+F +   A  ++KK   G+        II  ++       + Q + SAA
Sbjct: 116 WDIIQRVHLRGSFQVTRAAWDHMKKQNYGR--------IIMTASASGIYGNFGQANYSAA 167

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K  +  +  +L +E G    I  N IAP     +     + PE++     + +       
Sbjct: 168 KLGLLGLANTLVIE-GRKNNIHCNTIAPNAG--SRMTETVMPEDLV----EALKPE---- 216

Query: 192 KWDIAMAALYLASDA 206
              +A   L+L  ++
Sbjct: 217 --YVAPLVLWLCHES 229

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 37/191 (19%), Positives = 66/191 (34%), Gaps = 25/191 (13%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            +  + DV  +      +      +G  D +VN A    L   +    N ++ + +++ +
Sbjct: 61  TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDS 137
           G        L  +K    G         IINIS+     T      Y       K AV +
Sbjct: 121 GLLNGMQAVLAPMKARNCGT--------IINISSIAGKKTFPDHAAY----CGTKFAVHA 168

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW---- 193
           I+ ++  E      +RV  IAP  +  T  +S    ++I+     +              
Sbjct: 169 ISENVREEVA-ASNVRVMTIAPSAV-KTELLSHTTSQQIKDGYDAW---RVDMGGVLAAD 223

Query: 194 DIAMAALYLAS 204
           D+A A L+   
Sbjct: 224 DVARAVLFAYQ 234

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 79.0 bits (195), Expect = 2e-17
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 23/195 (11%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  + + G  A   + DV   +D+  ++++ I+ +G +DILVN A          +S   
Sbjct: 361 VDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQE 418

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           + +V ++  +GTF +   A  Y  +           G IINI++T      + Q + S++
Sbjct: 419 WDSVQQVHLIGTFNLSRLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQANYSSS 470

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA +  +++++A+E G    I+VN +AP    +TA    +  E+ +    +   A     
Sbjct: 471 KAGILGLSKTMAIE-GAKNNIKVNIVAPH--AETAMTLSIMREQDK----NLYHAD---- 519

Query: 192 KWDIAMAALYLASDA 206
              +A   +YL +D 
Sbjct: 520 --QVAPLLVYLGTDD 532

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 42/195 (21%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  +   G  A+    +V    D  ++VE+ + +FG + +++N A        + ++   
Sbjct: 58  VDEIVKNGGVAVADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKD 114

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           ++ VI++   G F +   A  Y +K   G+        I+N S+       + Q + ++A
Sbjct: 115 YKLVIDVHLNGAFAVTKAAWPYFQKQKYGR--------IVNTSSPAGLYGNFGQANYASA 166

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K+A+     +LA E G  Y I+ N IA  P+  +     + P  +     + +       
Sbjct: 167 KSALLGFAETLAKE-GAKYNIKANAIA--PLARSRMTESIMPPPML----EKLGPE---- 215

Query: 192 KWDIAMAALYLASDA 206
              +A   LYL+S  
Sbjct: 216 --KVAPLVLYLSSAE 228

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 76.5 bits (189), Expect = 3e-17
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 10/163 (6%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
             K  L    A    LG        D   RED     +      G + ILVN A   +  
Sbjct: 63  INKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 122

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
                         E++ +  F      L  + K   G         I+ +++   + + 
Sbjct: 123 DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGH--------IVTVASAAGHVSV 174

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIK 163
            + +   ++K A     ++L  E        ++   + P  + 
Sbjct: 175 PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVN 217

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 76.6 bits (189), Expect = 4e-17
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 20/166 (12%)

Query: 2   GRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            RR   L      +            + D+ + E     +E+    F  +DILVN A   
Sbjct: 67  ARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA 126

Query: 60  F-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL- 117
                   ++    + V + +      +    L   +    G         I+N+ +   
Sbjct: 127 LGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGD--------IVNLGSIAG 178

Query: 118 HYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                  + Y     A+K AV + T SL  E   +  IRV  IAPG
Sbjct: 179 RDAYPTGSIY----CASKFAVGAFTDSLRKEL-INTKIRVILIAPG 219

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 76.2 bits (188), Expect = 6e-17
 Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 25/167 (14%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R+T     + A +     AI L  DV   E    V    +  +G++D+LVN A    +  
Sbjct: 37  RRTEALDDLVAAYPDRAEAISL--DVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGA 94

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT- 122
            E+ +    R + E+   G   +    L  +    R + S    G ++NIS+     +  
Sbjct: 95  FEETTERELRDLFELHVFGPARLTRALLPQM----RERGS----GSVVNISSFGGQLSFA 146

Query: 123 ---WYQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK 163
               Y    SA KAA++ ++  LA E   +G    I+V  + PG  +
Sbjct: 147 GFSAY----SATKAALEQLSEGLADEVAPFG----IKVLIVEPGAFR 185

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 74.1 bits (183), Expect = 2e-16
 Identities = 30/184 (16%), Positives = 62/184 (33%), Gaps = 25/184 (13%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR ++ L   V     L         D+   ++  ++ E           +V++A   + 
Sbjct: 32  GRSESKLS-TVTN--CLSNNVGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYF 85

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              ++  P   +T+IE +      +  E +K  K              ++ I +T     
Sbjct: 86  GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVN---------VVMIMSTAAQQP 136

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLA 172
              +    A K AV  +  S+ LE      +++  + PG +         K     S ++
Sbjct: 137 KAQESTYCAVKWAVKGLIESVRLELK-GKPMKIIAVYPGGMATEFWETSGKSLDTSSFMS 195

Query: 173 PEEI 176
            E+ 
Sbjct: 196 AEDA 199

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 28/197 (14%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  +   G  A+     V    D  +V+E+ I  FG++DILVN A           S   
Sbjct: 69  VDEIRKAGGEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQD 125

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
           +  V ++   G+F     A  Y+KK   GR   +SS+ GI  N            Q++ +
Sbjct: 126 WNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG----------QVNYT 175

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           AAK  +  +  ++A+E G    +  N I P     +     + P+ +     + +     
Sbjct: 176 AAKMGLIGLANTVAIE-GARNNVLCNVIVPT--AASRMTEGILPDILF----NELKPKL- 227

Query: 190 GEKWDIAMAALYLASDA 206
                IA    YL  ++
Sbjct: 228 -----IAPVVAYLCHES 239

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 18/164 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NF 60
           GRR+  L+ A+A   S     + L  DVR R      V++    F  L  L+N A     
Sbjct: 52  GRREERLQ-ALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALG 110

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS---ATL 117
             PA+    + + T+++ +  G        L  L   G       +G  I+N+       
Sbjct: 111 TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-------AGASIVNLGSVAGKW 163

Query: 118 HY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
            Y  +  Y       KA V+  + +L  +      +RV  + PG
Sbjct: 164 PYPGSHVY----GGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEPG 202

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 75.0 bits (185), Expect = 3e-16
 Identities = 45/209 (21%), Positives = 77/209 (36%), Gaps = 30/209 (14%)

Query: 9   RSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAG----NFL 61
             A   L  +   +    L  DV   +   ++      H G K+DILVN A G      L
Sbjct: 246 DGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNA-GITRDKLL 304

Query: 62  V--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATL 117
                +      +  VI ++ +    +    +    + +GGR          +I +S+  
Sbjct: 305 ANMDEKR-----WDAVIAVNLLAPQRLTEGLVGNGTIGEGGR----------VIGLSSMA 349

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                  Q + +  KA +  +  +LA     D  I +N +APG I +T     + P   R
Sbjct: 350 GIAGNRGQTNYATTKAGMIGLAEALAPVLA-DKGITINAVAPGFI-ETKMTEAI-PLATR 406

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDA 206
                  + ++ G+  D+A    Y AS A
Sbjct: 407 EVGRRLNSLFQGGQPVDVAELIAYFASPA 435

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 71.4 bits (175), Expect = 4e-15
 Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 45/208 (21%)

Query: 25  LEGDVRKREDAVRVVESTIN--------HFGKLDILVNAAA------GNFLVPAEDLSPN 70
           +  +V   +    V   TI+          G++DILV++ A         L      S  
Sbjct: 102 VPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLL----QTSRK 157

Query: 71  GFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WY 124
           G+   +   S  +F+ +    L  +K+GG           +      L Y A+      Y
Sbjct: 158 GYLAAVSS-SSYSFVSLLQHFLPLMKEGG---------SAL-----ALSYIASEKVIPGY 202

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATD 182
              +S+AKAA++S  R+LA E G   A+RVN I+ GP+K  A   + K   +     A D
Sbjct: 203 GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAID 262

Query: 183 YMAAYKFGEK----WDIAMAALYLASDA 206
           Y  A    +K     D+  AAL+L S  
Sbjct: 263 YSEANAPLQKELESDDVGRAALFLLSPL 290

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 69.0 bits (169), Expect = 3e-14
 Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 45/207 (21%)

Query: 25  LEGDVRKREDAVRVVESTIN--------HFGKLDILVNAAA------GNFLVPAEDLSPN 70
           +  D++  +    V   TI           G +DILV++ A         L    + S  
Sbjct: 89  VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLL----ETSRK 144

Query: 71  GFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WY 124
           G+       S  +F+ +       + +GG           +     TL Y A       Y
Sbjct: 145 GYLAASSN-SAYSFVSLLQHFGPIMNEGG---------SAV-----TLSYLAAERVVPGY 189

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATD 182
              +S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A   + K   +     A D
Sbjct: 190 GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAID 249

Query: 183 YMAAYKFGEK----WDIAMAALYLASD 205
           Y        +     D+  AAL+L S 
Sbjct: 250 YSYNNAPLRRDLHSDDVGGAALFLLSP 276

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 68.2 bits (167), Expect = 4e-14
 Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 51/191 (26%)

Query: 37  RVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHE 89
              E     FG +DILV++ A         L    + S  G+   I   S  +F+ +   
Sbjct: 108 EAAECVRQDFGSIDILVHSLANGPEVSKPLL----ETSRKGYLAAISA-SSYSFVSLLSH 162

Query: 90  ALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLAL 144
            L  +  GG           I     +L Y A+      Y   +S+AKAA++S TR LA 
Sbjct: 163 FLPIMNPGG---------ASI-----SLTYIASERIIPGYGGGMSSAKAALESDTRVLAF 208

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------D 194
           E G    IRVN I+ GP+   A                     ++              +
Sbjct: 209 EAGRKQNIRVNTISAGPLGSRAA----------KAIGFIDTMIEYSYNNAPIQKTLTADE 258

Query: 195 IAMAALYLASD 205
           +  AA +L S 
Sbjct: 259 VGNAAAFLVSP 269

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 65.8 bits (161), Expect = 2e-13
 Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 16/172 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILV-NAAAG 58
             R     + + ++    +  + L   V   +     V       G   L +L+ NA   
Sbjct: 35  TARDVEKATELKSIKDSRVHVLPL--TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL 92

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG---RGQASSSSGGIIINISA 115
                  + +       +++++    ++  + L  LK       G   S S   +I IS+
Sbjct: 93  LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS 152

Query: 116 -----TLHYTATWYQIHVS--AAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                T + + +     ++   +KAA++   R+LA++   D  + V    PG
Sbjct: 153 GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPG 203

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 64.6 bits (158), Expect = 8e-13
 Identities = 44/216 (20%), Positives = 73/216 (33%), Gaps = 47/216 (21%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFG---KLDILVNAAAGNFLVPAEDLSPN--- 70
            L   A  LE DV+  E    +        G   KLD +V++    F +P   +  N   
Sbjct: 53  RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG--F-MPQTGMGINPFF 109

Query: 71  -----GFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 122
                     I I S  ++  M    L  +  GG          I+      + +  +  
Sbjct: 110 DAPYADVSKGIHI-SAYSYASMAKALLPIMNPGG---------SIV-----GMDFDPSRA 154

Query: 123 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
              Y   ++ AK+A++S+ R +A E G    +R N +A GPI+  A  + +         
Sbjct: 155 MPAYNW-MTVAKSALESVNRFVAREAGKY-GVRSNLVAAGPIRTLAMSAIVGGALGEEAG 212

Query: 181 TDYMAAYKFGE-----KW------DIAMAALYLASD 205
                  +  +      W       +A     L SD
Sbjct: 213 AQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSD 248

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 64.6 bits (158), Expect = 9e-13
 Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 45/205 (21%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
            A   + DV+  E+ +   E      G +D + ++ A        G F     + S  GF
Sbjct: 85  EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFS----ETSREGF 140

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
               +I S  +   + HEA K + +GG   A++  GG      A  +Y        +  A
Sbjct: 141 LLAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----FAVQNYNV------MGVA 189

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA++++  + LAL+ G D  IRVN I+ GPI+  +                +    K  E
Sbjct: 190 KASLEANVKYLALDLGPD-NIRVNAISAGPIRTLSA----------KGVGGFNTILKEIE 238

Query: 192 KW----------DIAMAALYLASDA 206
           +           ++   A YL SD 
Sbjct: 239 ERAPLKRNVDQVEVGKTAAYLLSDL 263

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 64.9 bits (158), Expect = 9e-13
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 31/152 (20%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSV 81
           ++ +      V       +GK+++LV++ A       + L    + S  G+   +   S 
Sbjct: 93  NMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLL----NTSRKGYLDALSK-SS 147

Query: 82  GTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAV 135
            + I +C   +  +K             II     +L Y A+      Y   +S+AKAA+
Sbjct: 148 YSLISLCKYFVNIMKPQS---------SII-----SLTYHASQKVVPGYGGGMSSAKAAL 193

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167
           +S TR LA   G +Y IR+N I+ GP+K  A 
Sbjct: 194 ESDTRVLAYHLGRNYNIRINTISAGPLKSRAA 225

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 14/168 (8%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE--STINHFGKLDILV-NAAAGNF 60
           R       +  L         LE D+R  +   ++V     +     L++L  NA     
Sbjct: 56  RNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPK 115

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG---RGQASSSSGGIIINISA-- 115
                 +        ++ ++V   ++    L  LKK       Q        IIN+S+  
Sbjct: 116 SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175

Query: 116 ---TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                +     Y    S  K+A+++ T+SL+++      I    + PG
Sbjct: 176 GSIQGNTDGGMYAYRTS--KSALNAATKSLSVDLYPQ-RIMCVSLHPG 220

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 41/205 (20%), Positives = 73/205 (35%), Gaps = 45/205 (21%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
            +I L  DV    +      S     G +  + +  A        G +L    + + +GF
Sbjct: 60  DSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYL----NTNRDGF 115

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
                I S  +   +   A   + +GG     +  GG         +Y        +  A
Sbjct: 116 LLAHNI-SSYSLTAVVKAARPMMTEGGSIVTLTYLGGE----LVMPNYNV------MGVA 164

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA++D+  + LA + G +  IRVN I+ GPI+  +              +D+ +  K  E
Sbjct: 165 KASLDASVKYLAADLGKE-NIRVNSISAGPIRTLSA----------KGISDFNSILKDIE 213

Query: 192 KW----------DIAMAALYLASDA 206
           +           ++   A +L SD 
Sbjct: 214 ERAPLRRTTTPEEVGDTAAFLFSDM 238

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 45/206 (21%), Positives = 75/206 (36%), Gaps = 55/206 (26%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
              DV + E+   +       FG LD LV+A A        G ++    D     +   +
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI----DTRRQDWLLAL 118

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSA 130
           E+ S  + + +   A   L++GG         GI+     TL Y         Y + ++ 
Sbjct: 119 EV-SAYSLVAVARRAEPLLREGG---------GIV-----TLTYYASEKVVPKYNV-MAI 162

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA+++  R LA E G    +RVN I+ GP++  A                +   Y   
Sbjct: 163 AKAALEASVRYLAYELGPK-GVRVNAISAGPVRTVAA----------RSIPGFTKMYDRV 211

Query: 191 EKW----------DIAMAALYLASDA 206
            +           ++    L+L S  
Sbjct: 212 AQTAPLRRNITQEEVGNLGLFLLSPL 237

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 63.0 bits (154), Expect = 3e-12
 Identities = 52/206 (25%), Positives = 79/206 (38%), Gaps = 55/206 (26%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
            E DV K E    +  S     G LD +V++ A        G+ L    + S + F T +
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL----ETSKSAFNTAM 116

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSA 130
           EI SV + I + +     L  G           ++     TL Y         Y + +  
Sbjct: 117 EI-SVYSLIELTNTLKPLLNNGA---------SVL-----TLSYLGSTKYMAHYNV-MGL 160

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA++S  R LA++ G    IRVN ++ GPI+  A           S   D+    K+ 
Sbjct: 161 AKAALESAVRYLAVDLGKH-HIRVNALSAGPIRTLAS----------SGIADFRMILKWN 209

Query: 191 EKW----------DIAMAALYLASDA 206
           E            ++  A +YL S  
Sbjct: 210 EINAPLRKNVSLEEVGNAGMYLLSSL 235

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 62.6 bits (153), Expect = 4e-12
 Identities = 49/198 (24%), Positives = 72/198 (36%), Gaps = 45/198 (22%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEID 79
           DV        V E+    +GKLD LV+A          G ++    D S   F   + I 
Sbjct: 89  DVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI----DTSEANFTNTMLI- 143

Query: 80  SVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           SV +   +   A K +  GG     +  G          +Y        +  AKAA+++ 
Sbjct: 144 SVYSLTAVSRRAEKLMADGGSILTLTYYGAE----KVMPNYNV------MGVAKAALEAS 193

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----- 193
            + LA++ G    IRVN I+ GPIK  A           S   D+    K+ E       
Sbjct: 194 VKYLAVDLGPQ-NIRVNAISAGPIKTLAA----------SGIGDFRYILKWNEYNAPLRR 242

Query: 194 -----DIAMAALYLASDA 206
                ++    LY  SD 
Sbjct: 243 TVTIDEVGDVGLYFLSDL 260

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 62.7 bits (153), Expect = 4e-12
 Identities = 48/198 (24%), Positives = 75/198 (37%), Gaps = 45/198 (22%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEID 79
           DV   E    + +     +G LD +V+A A        G ++    D S   F T + I 
Sbjct: 88  DVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYV----DTSLGNFLTSMHI- 142

Query: 80  SVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           S  +F  +  +A   +  GG     S  G          HY        +   KAA+++ 
Sbjct: 143 SCYSFTYIASKAEPLMTNGGSILTLSYYGAE----KVVPHYNV------MGVCKAALEAS 192

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----- 193
            + LA++ G    IRVN I+ GP++  A           S  +D+     + +       
Sbjct: 193 VKYLAVDLGKQ-QIRVNAISAGPVRTLAS----------SGISDFHYILTWNKYNSPLRR 241

Query: 194 -----DIAMAALYLASDA 206
                D+  AALYL SD 
Sbjct: 242 NTTLDDVGGAALYLLSDL 259

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 62.6 bits (153), Expect = 4e-12
 Identities = 41/201 (20%), Positives = 71/201 (35%), Gaps = 44/201 (21%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
           L+ DV +      +       + K D  V++          G+++     ++  GF+   
Sbjct: 64  LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV---NAVTREGFKIAH 120

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           +I S  +F+ M       L  G      S  G       A  +Y        +  AKA++
Sbjct: 121 DI-SSYSFVAMAKACRSMLNPGSALLTLSYLGAE----RAIPNYNV------MGLAKASL 169

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW-- 193
           ++  R +A   G +  +RVN I+ GPI+  A           S   D+       E    
Sbjct: 170 EANVRYMANAMGPE-GVRVNAISAGPIRTLAA----------SGIKDFRKMLAHCEAVTP 218

Query: 194 --------DIAMAALYLASDA 206
                   D+  +A +L SD 
Sbjct: 219 IRRTVTIEDVGNSAAFLCSDL 239

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 62.2 bits (152), Expect = 5e-12
 Identities = 48/201 (23%), Positives = 69/201 (34%), Gaps = 44/201 (21%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
              DV        +  S   H+  LD LV++          G+FL   + L+   FR   
Sbjct: 69  FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFL---DGLTRENFRIAH 125

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           +I S  +F  +   AL  L         S  G       A  +Y        +  AKAA+
Sbjct: 126 DI-SAYSFPALAKAALPMLSDDASLLTLSYLGAE----RAIPNYNT------MGLAKAAL 174

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW-- 193
           ++  R LA+  G    +RVN I+ GPIK  A           S    +     F E    
Sbjct: 175 EASVRYLAVSLGAK-GVRVNAISAGPIKTLAA----------SGIKSFGKILDFVESNSP 223

Query: 194 --------DIAMAALYLASDA 206
                    +  A  +L SD 
Sbjct: 224 LKRNVTIEQVGNAGAFLLSDL 244

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 61.9 bits (151), Expect = 6e-12
 Identities = 42/210 (20%), Positives = 74/210 (35%), Gaps = 53/210 (25%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
           PA  L  DV   ++   +       +  LD +V++ A        GNF+   + ++  GF
Sbjct: 76  PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFI---DCVTREGF 132

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQI 126
               +I S  +F  +  E    +K             ++      L Y         Y  
Sbjct: 133 SIAHDI-SAYSFAALAKEGRSMMKNRN--------ASMV-----ALTYIGAEKAMPSYNT 178

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
            +  AKA++++  R  AL  G D  I+VN ++ GPIK  A           S  +++   
Sbjct: 179 -MGVAKASLEATVRYTALALGED-GIKVNAVSAGPIKTLAA----------SGISNFKKM 226

Query: 187 YKFGEKW----------DIAMAALYLASDA 206
             +              ++     +L SD 
Sbjct: 227 LDYNAMVSPLKKNVDIMEVGNTVAFLCSDM 256

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 61.9 bits (151), Expect = 7e-12
 Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 54/206 (26%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
           ++ DV   ED   + +    ++G LDI+V++ A        G  +    D S  GF+  +
Sbjct: 76  VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVI----DTSREGFKIAM 131

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSA 130
           +I SV + I +  E L  ++           G I+     TL Y         Y + +  
Sbjct: 132 DI-SVYSLIALTRELLPLMEGRN--------GAIV-----TLSYYGAEKVVPHYNV-MGI 176

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA++S  R LA +       R+N I+ GP+K  A              T +    +  
Sbjct: 177 AKAALESTVRYLAYDIAKH-GHRINAISAGPVKTLAA----------YSITGFHLLMEHT 225

Query: 191 EKW----------DIAMAALYLASDA 206
            K           D+   A++L SD 
Sbjct: 226 TKVNPFGKPITIEDVGDTAVFLCSDW 251

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 62.0 bits (151), Expect = 9e-12
 Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 25/163 (15%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L  A  AL         L+ DVR  +      E      G++D+LV  A    L P E L
Sbjct: 45  LWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEAL 102

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----W 123
             +   +V++++ VGT  M    L  +K+ G G+        ++   +            
Sbjct: 103 GEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR--------VLVTGSVGGLMGLPFNDV 154

Query: 124 YQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK 163
           Y     A+K A++ +  SLA+    +G    + ++ I  GP+ 
Sbjct: 155 Y----CASKFALEGLCESLAVLLLPFG----VHLSLIECGPVH 189

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 13/167 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++AV  L + G+     + D+   +    + +     +G LD+LVN A   F V      
Sbjct: 43  QAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPF 102

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
                  ++ +  GT  +C E L  +K  GR          ++N+S+ +   A       
Sbjct: 103 HIQAEVTMKTNFFGTRDVCTELLPLIKPQGR----------VVNVSSIMSVRALKSCSPE 152

Query: 129 SAAKAAVDSIT--RSLALEWGTDYAIRVNGIAPGPIKDTA-GVSKLA 172
              K   ++IT    + L        +           +A GV+K+ 
Sbjct: 153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIG 199

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 44.6 bits (105), Expect = 7e-06
 Identities = 33/208 (15%), Positives = 55/208 (26%), Gaps = 45/208 (21%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGN 59
            R  T    AV  L +      +  + DV      +  + +    HFGKLDILVN A   
Sbjct: 43  CRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVA 102

Query: 60  FLVPAED------------------------------LSPNGFRTVIEIDSVGTFIMCHE 89
                 D                               +       ++I+  G   +   
Sbjct: 103 GFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEV 162

Query: 90  ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT----RSLALE 145
            +  L+         S    I+N+S++                   D++T      +   
Sbjct: 163 LIPLLQL--------SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNM 214

Query: 146 WGTDYAIRVNGIAPGPIKDTA-GVSKLA 172
              D+   +      P    A   SK  
Sbjct: 215 LLKDFKENLIETNGWPSFGAAYTTSKAC 242

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	208
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.98
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.98
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.98
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.98
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.98
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.98
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.97
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.97
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.97
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.97
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.97
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.97
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.97
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.97
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.97
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.97
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.97
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.97
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.96
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.96
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.96
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.94
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.94
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.94
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.91
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.9
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.9
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.87
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.85
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.76
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.73
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.7
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.7
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.7
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.69
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.68
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.68
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.67
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.66
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.66
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.65
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.63
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.62
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.61
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.61
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.6
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.6
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.59
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.57
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.57
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.56
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.55
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.55
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.54
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.54
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.53
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.53
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.53
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.52
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.51
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.51
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.51
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.5
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.5
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.49
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.48
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.48
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.47
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.47
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.47
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.46
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.46
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.45
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.45
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.45
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.44
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.43
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.43
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.43
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.42
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.42
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.42
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.4
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.39
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.38
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.38
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.35
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.35
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.35
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.34
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.33
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.33
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.32
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.32
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.3
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.29
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.28
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.27
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.27
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.26
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.25
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.16
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.14
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.08
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.89
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.87
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.76
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.76
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.7
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.67
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.6
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.59
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.47
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.46
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.37
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.35
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.97
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.77
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.03
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.85
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.07
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	93.71
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	92.5
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	91.69
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	91.05
2l82_A	162	Designed protein OR32; structural genomics, northe	89.46
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	87.01
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	85.59
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	85.48
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	85.08
1vjp_A	394	MYO-inositol-1-phosphate synthase-related protein;	82.83
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	80.3

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3.5e-48  Score=293.71  Aligned_cols=200  Identities=25%  Similarity=0.325  Sum_probs=186.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++.+.+.++..++||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++++++|+
T Consensus        39 ~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl  118 (255)
T 4g81_D           39 NDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNL  118 (255)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            47999999999999999988999999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++|+++|+|+++..       +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       119 ~g~~~~~~~~~p~m~~~~~-------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG  190 (255)
T 4g81_D          119 TSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPG  190 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHccC-------CCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeC
Confidence            9999999999999987532       69999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++......+++....+...+|++|+++|+|+|++++||+|++++
T Consensus       191 ~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~  238 (255)
T 4g81_D          191 YILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASD  238 (255)
T ss_dssp             SBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGT
T ss_pred             CCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            999998765555566667778889999999999999999999999863

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.8e-47  Score=289.59  Aligned_cols=199  Identities=24%  Similarity=0.390  Sum_probs=180.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++++++.++++..+.++..+++|++|+++++++++++.+++|+||+||||||+... .++.+.+.++|++++++|
T Consensus        37 ~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vN  116 (254)
T 4fn4_A           37 VELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVN  116 (254)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHH
Confidence            4789999999999999999899999999999999999999999999999999999997654 678899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.|++.++|+++|+|++++        +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+|
T Consensus       117 l~g~~~~~~~~~p~m~~~~--------~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~P  187 (254)
T 4fn4_A          117 LYSAFYSSRAVIPIMLKQG--------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLP  187 (254)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CcEEEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEe
Confidence            9999999999999999987        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCCCChH--HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          160 GPIKDTAGVSKLAPE--EIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       160 G~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+|++......+.  ..........|++|+++|+|+|++++||+|++++
T Consensus       188 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~  238 (254)
T 4fn4_A          188 GTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEAS  238 (254)
T ss_dssp             CSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGT
T ss_pred             CCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999999876554322  2223334446789999999999999999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.7e-45  Score=280.27  Aligned_cols=194  Identities=27%  Similarity=0.408  Sum_probs=172.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++   +.++..+++|++|+++++++++++.+++|+||+||||||.....++.+.+.++|++++++|+
T Consensus        59 ~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl  135 (273)
T 4fgs_A           59 TGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNV  135 (273)
T ss_dssp             EESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHh
Confidence            478999999888877   66889999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++|+++|+|++          +|+||+++|..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       136 ~g~~~~~~~~~p~m~~----------~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVN~V~PG  204 (273)
T 4fgs_A          136 KGVLFTVQKALPLLAR----------GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK-DRGIRINTLSPG  204 (273)
T ss_dssp             HHHHHHHHHHTTTEEE----------EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhh----------CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeC
Confidence            9999999999999854          58899999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCCh-----HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAP-----EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++.......     +.....+...+|++|+++|+|+|++++||+|++++
T Consensus       205 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~  257 (273)
T 4fgs_A          205 PTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSS  257 (273)
T ss_dssp             SBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999986654321     23445667789999999999999999999999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.3e-45  Score=275.07  Aligned_cols=187  Identities=27%  Similarity=0.288  Sum_probs=169.9

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      +++.+++.+.+.++..+++|++|+++++++++     +|++|++|||||+....++.+.+.++|++++++|+.|+|.++|
T Consensus        45 ~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~  119 (247)
T 4hp8_A           45 DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQ  119 (247)
T ss_dssp             HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHH
Confidence            46677888888899999999999999887764     4899999999999988999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      +++|+|+++++       +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+||+|+||+..
T Consensus       120 ~~~~~m~~~g~-------~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~~~~  191 (247)
T 4hp8_A          120 AFAKELLAKGR-------SGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWA-AKGINVNAIAPGYIETNNTE  191 (247)
T ss_dssp             HHHHHHHHHTC-------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGH
T ss_pred             HHHHHHHHhCC-------CcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCcchh
Confidence            99999988642       69999999999999999999999999999999999999999 99999999999999999876


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ....+....+.+...+|++|+++|+|+|++++||+|++++
T Consensus       192 ~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~  231 (247)
T 4hp8_A          192 ALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAAD  231 (247)
T ss_dssp             HHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGT
T ss_pred             hcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            5444555566777889999999999999999999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.1e-43  Score=268.42  Aligned_cols=195  Identities=25%  Similarity=0.254  Sum_probs=168.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++.+ ..+++.+.+.++.+++||++|+++++++++++.+++|+||++|||||+.... ..+.+.++|++++++|+.
T Consensus        38 ~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~  115 (258)
T 4gkb_A           38 ARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLI  115 (258)
T ss_dssp             ESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CTTSCHHHHHHHHHHHTH
T ss_pred             ECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CccCCHHHHHHHHHHHhH
Confidence            46665543 4556667788899999999999999999999999999999999999986544 457899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++|+++|+|+++         +|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||+
T Consensus       116 g~~~~~~~~~p~m~~~---------~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela-~~gIrVN~V~PG~  185 (258)
T 4gkb_A          116 HYYAMAHYCVPHLKAT---------RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALR-EHGVRVNAVIPAE  185 (258)
T ss_dssp             HHHHHHHHHHHHHHHH---------TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhc---------CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCC
Confidence            9999999999999765         59999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCCCC----hHHHHHhhhhhhcCC-CCCCHHHHHHHHHHhcCCCCC
Q 028508          162 IKDTAGVSKLA----PEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       162 v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|++......    ++.........+|++ |+++|+|+|++++||+|++++
T Consensus       186 i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~  237 (258)
T 4gkb_A          186 VMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS  237 (258)
T ss_dssp             BCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99998765432    233445566778885 899999999999999999874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.2e-43  Score=264.63  Aligned_cols=174  Identities=28%  Similarity=0.324  Sum_probs=154.6

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++..+++|++|+++++++++    ++|++|+||||||+..  ++.+.+.++|++++++|+.|++.++|++.|.|+++ 
T Consensus        53 ~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-  125 (242)
T 4b79_A           53 HPRIRREELDITDSQRLQRLFE----ALPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-  125 (242)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHH----HCSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             cCCeEEEEecCCCHHHHHHHHH----hcCCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-
Confidence            4567889999999999887765    5799999999999865  45678999999999999999999999999998765 


Q ss_pred             CCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                              +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+||+|+||+......+.+..+
T Consensus       126 --------~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~  196 (242)
T 4b79_A          126 --------GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYA-AERIRVNAIAPGWIDTPLGAGLKADVEATR  196 (242)
T ss_dssp             --------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCC-----CCCHHHHH
T ss_pred             --------CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCCChhhhcccCCHHHHH
Confidence                    69999999999999999999999999999999999999999 999999999999999998777666666677


Q ss_pred             hhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          179 KATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      .+...+|++|+++|+|+|++++||+|++++
T Consensus       197 ~~~~~~PlgR~g~peeiA~~v~fLaSd~a~  226 (242)
T 4b79_A          197 RIMQRTPLARWGEAPEVASAAAFLCGPGAS  226 (242)
T ss_dssp             HHHHTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            788899999999999999999999999874

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.9e-42  Score=261.05  Aligned_cols=183  Identities=22%  Similarity=0.242  Sum_probs=164.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|++++++++.    +.+.++..++||++|+++++++++++.+++|+||+||||||.....++.+.+.++|++++++|+.
T Consensus        33 ~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~  108 (247)
T 3ged_A           33 DIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLK  108 (247)
T ss_dssp             ESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            57776665543    34567899999999999999999999999999999999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++|++.|+|+++         +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ + |||||+|+||+
T Consensus       109 g~~~~~~~~~~~m~~~---------~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~-~IrVN~I~PG~  177 (247)
T 3ged_A          109 APYELSRLCRDELIKN---------KGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLG-P-DVLVNCIAPGW  177 (247)
T ss_dssp             HHHHHHHHHHHHHHHT---------TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TSEEEEEEECS
T ss_pred             HHHHHHHHHHHHHhhc---------CCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEecCc
Confidence            9999999999999875         59999999999999999999999999999999999999998 7 99999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|++...      ..+.....+|++|+++|+|+|++++||+|+
T Consensus       178 i~t~~~~~------~~~~~~~~~Pl~R~g~pediA~~v~fL~s~  215 (247)
T 3ged_A          178 INVTEQQE------FTQEDCAAIPAGKVGTPKDISNMVLFLCQQ  215 (247)
T ss_dssp             BCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC
T ss_pred             CCCCCcHH------HHHHHHhcCCCCCCcCHHHHHHHHHHHHhC
Confidence            99986532      234455678999999999999999999985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=4.3e-42  Score=262.23  Aligned_cols=197  Identities=23%  Similarity=0.232  Sum_probs=178.4

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTV   75 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~   75 (208)
                      ++|+++.++++.+++.+.+ .++.++++|++|+++++++++++.+++|++|++|||||+...    ..+.+.+.++|...
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~  117 (256)
T 4fs3_A           38 TYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLA  117 (256)
T ss_dssp             EESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHH
Confidence            3688899999999988765 478899999999999999999999999999999999998653    34567888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.+++.+.+.+.+          +|+||++||..+..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||
T Consensus       118 ~~vn~~~~~~~~~~~~~~~~~----------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela-~~gIrVN  186 (256)
T 4fs3_A          118 QDISSYSLTIVAHEAKKLMPE----------GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG-PDNIRVN  186 (256)
T ss_dssp             HHHHTHHHHHHHHHHHTTCTT----------CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcc----------CCEEEEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhC-ccCeEEE
Confidence            999999999999999876543          69999999999999999999999999999999999999999 9999999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+||+|+|++.......++..+.+....|++|+++|+|+|++++||+|++++
T Consensus       187 ~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~  239 (256)
T 4fs3_A          187 AISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSS  239 (256)
T ss_dssp             EEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             EEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999998777666677778888899999999999999999999999863

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.1e-39  Score=249.37  Aligned_cols=197  Identities=25%  Similarity=0.330  Sum_probs=183.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+.++++|+.
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  115 (258)
T 3oid_A           36 ARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAK  115 (258)
T ss_dssp             SSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68899999999999888888999999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++++++|.|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       116 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~  186 (258)
T 3oid_A          116 ALLFCAQEAAKLMEKNG--------GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELS-PKQIIVNAVSGGA  186 (258)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCC
Confidence            99999999999999876        79999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++..................|++|+++|+|+|++++||+|+.+
T Consensus       187 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~  232 (258)
T 3oid_A          187 IDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKA  232 (258)
T ss_dssp             BCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTT
T ss_pred             CcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999877655555566677788899999999999999999999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=9e-41  Score=254.67  Aligned_cols=178  Identities=19%  Similarity=0.250  Sum_probs=156.8

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ...+++|++++++++++++++.+++|+||++|||||+...  .++.+.+.++|++++++|+.+++.++|+++|+|++++ 
T Consensus        52 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-  130 (261)
T 4h15_A           52 ELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-  130 (261)
T ss_dssp             TTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-
Confidence            4578999999999999999999999999999999997643  5788999999999999999999999999999999987 


Q ss_pred             CCCCCCCCceEEEeccccccccCC-chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC--------
Q 028508          100 GQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------  170 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~--------  170 (208)
                             +|+||++||..+..+.+ +...|+++|+|+.+|+|+|+.|++ ++|||||+|+||+|+|++....        
T Consensus       131 -------~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~  202 (261)
T 4h15_A          131 -------SGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVS-PKGVRVVRVSPGWIETEASVRLAERLAKQA  202 (261)
T ss_dssp             -------CEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHHHHT
T ss_pred             -------CceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeCCCcCCcchhhhhHHHHHhh
Confidence                   79999999999998876 688999999999999999999999 9999999999999999864321        


Q ss_pred             -CCh---HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          171 -LAP---EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       171 -~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                       ...   ..........+|++|+++|+|+|++++||+|++++
T Consensus       203 ~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~  244 (261)
T 4h15_A          203 GTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAA  244 (261)
T ss_dssp             TCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             ccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence             111   12233445668999999999999999999999863

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.3e-39  Score=247.31  Aligned_cols=196  Identities=33%  Similarity=0.452  Sum_probs=179.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++ +.+.++|+.++++|+
T Consensus        42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~  120 (256)
T 3gaf_A           42 TDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNL  120 (256)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHh
Confidence            3688999999999998888899999999999999999999999999999999999999887777 889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       121 ~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG  191 (256)
T 3gaf_A          121 FSLFRLSQLAAPHMQKAG--------GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVG-PMGIRVNAIAPG  191 (256)
T ss_dssp             HHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEEc
Confidence            999999999999999876        79999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++..... .......+....|++|+++|+|+|++++||+|+++
T Consensus       192 ~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~  237 (256)
T 3gaf_A          192 AIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAA  237 (256)
T ss_dssp             CBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             cccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99998764433 23344566677899999999999999999999865

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-39  Score=250.89  Aligned_cols=198  Identities=23%  Similarity=0.336  Sum_probs=181.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        56 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~  135 (271)
T 4ibo_A           56 NGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNL  135 (271)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHh
Confidence            47899999999999988888899999999999999999999999999999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       136 ~g~~~l~~~~~~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  206 (271)
T 4ibo_A          136 TSAFMIGREAAKRMIPRG--------YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWA-QYGIQANAIGPG  206 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEec
Confidence            999999999999999876        78999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++..................|++|+++|+|+|++++||+|+.+
T Consensus       207 ~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~  253 (271)
T 4ibo_A          207 YMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASAS  253 (271)
T ss_dssp             SBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred             cEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99998755432223445556677899999999999999999999865

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.4e-39  Score=248.48  Aligned_cols=199  Identities=24%  Similarity=0.313  Sum_probs=180.5

Q ss_pred             CCCcHHHHHHHHHHHHh-cCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++.+ .+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|
T Consensus        50 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  129 (266)
T 4egf_A           50 SGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVN  129 (266)
T ss_dssp             EESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHH
Confidence            36899999999999877 47789999999999999999999999999999999999999888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++++.|.|++++.       +|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+|
T Consensus       130 ~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gI~vn~v~P  201 (266)
T 4egf_A          130 LRAPALLASAVGKAMVAAGE-------GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG-PHGIRANSVCP  201 (266)
T ss_dssp             THHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCC-------CeEEEEEcchhhccCCCCChHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEe
Confidence            99999999999999987642       58999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++..................|++|+++|+|+|++++||+|+++
T Consensus       202 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~  249 (266)
T 4egf_A          202 TVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAA  249 (266)
T ss_dssp             SCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            999998765444444455566778899999999999999999999865

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=8e-39  Score=247.54  Aligned_cols=198  Identities=30%  Similarity=0.394  Sum_probs=174.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|++|||||+... .++.+.+.++|++++++|
T Consensus        58 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN  137 (283)
T 3v8b_A           58 LGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVN  137 (283)
T ss_dssp             EESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHH
Confidence            3689999999999998888889999999999999999999999999999999999998754 788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +.|++.++++++|.|++++        .|+||++||..+..  +.++...|+++|+|+.+|+++++.|+. ++||+||+|
T Consensus       138 ~~g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v  208 (283)
T 3v8b_A          138 LRGTFLTLHLTVPYLKQRG--------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELG-KHHIRVNAV  208 (283)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCcEEEEE
Confidence            9999999999999999876        79999999999987  778999999999999999999999998 899999999


Q ss_pred             ecCcccCCCccCCCChHHH-----HHhhhhhhcC--CCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEI-----RSKATDYMAA--YKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++..........     ........|+  +|+++|+|+|++++||+|+.+
T Consensus       209 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a  265 (283)
T 3v8b_A          209 CPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERA  265 (283)
T ss_dssp             EECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGG
T ss_pred             EeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccc
Confidence            9999999986554221111     1222344566  899999999999999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=5e-39  Score=246.59  Aligned_cols=198  Identities=21%  Similarity=0.229  Sum_probs=174.8

Q ss_pred             CCCcHHHHHHHHHHHHh-cCC-CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHS-LGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~-~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++.. .+. ++..+.+|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|++++++
T Consensus        38 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~  117 (265)
T 3lf2_A           38 CARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL  117 (265)
T ss_dssp             EESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence            36899999999999987 333 5889999999999999999999999999999999999988888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       118 N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~  188 (265)
T 3lf2_A          118 KFFSVIHPVRAFLPQLESRA--------DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA-PKGVRVNGIL  188 (265)
T ss_dssp             HHHHHHHHHHHHHHHHTTST--------TEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhccC--------CeEEEEECCcccCCCCCCchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEE
Confidence            99999999999999998876        79999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCccCCC--------ChHHHHHhhhhh--hcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKL--------APEEIRSKATDY--MAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++.....        ....+.......  .|++|+++|+|+|++++||+|+.+
T Consensus       189 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~  247 (265)
T 3lf2_A          189 IGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLS  247 (265)
T ss_dssp             ECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             eCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchh
Confidence            9999998654321        122222222222  899999999999999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=9.3e-39  Score=244.69  Aligned_cols=196  Identities=26%  Similarity=0.332  Sum_probs=178.8

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++.+.+ .++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|
T Consensus        40 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N  119 (262)
T 3pk0_A           40 AGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVN  119 (262)
T ss_dssp             EESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence            3689999999999998776 688999999999999999999999999999999999999888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.++++++|.|++++        .|+||++||..+. .+.+++..|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       120 ~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~  190 (262)
T 3pk0_A          120 VNGTFYAVQACLDALIASG--------SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELA-PHKITVNAIM  190 (262)
T ss_dssp             THHHHHHHHHHHHHHHHHS--------SCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhccCCCCCChhhHHHHHHHHHHHHHHHHHHH-hhCcEEEEEE
Confidence            9999999999999999876        7899999999986 7889999999999999999999999999 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++....  .......+....|++|+++|+|+|++++||+|+++
T Consensus       191 PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~  237 (262)
T 3pk0_A          191 PGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEA  237 (262)
T ss_dssp             ECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             eCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999865432  23445666778899999999999999999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.8e-38  Score=239.91  Aligned_cols=194  Identities=25%  Similarity=0.344  Sum_probs=178.2

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++++++.+++...+.++.++++|++|.++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.|
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g  116 (246)
T 3osu_A           37 GSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKG  116 (246)
T ss_dssp             SCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHH
T ss_pred             CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence            46788899999998888889999999999999999999999999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||++
T Consensus       117 ~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v  187 (246)
T 3osu_A          117 VFNCIQKATPQMLRQR--------SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELA-SRGITVNAVAPGFI  187 (246)
T ss_dssp             HHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHHcC--------CCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECCC
Confidence            9999999999998876        79999999999999999999999999999999999999998 89999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++....  ............|++|+++|+|+|++++||+|+++
T Consensus       188 ~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~  230 (246)
T 3osu_A          188 VSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKA  230 (246)
T ss_dssp             GGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             cCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99876443  23445666778899999999999999999999865

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.1e-38  Score=245.15  Aligned_cols=196  Identities=29%  Similarity=0.352  Sum_probs=179.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++..+.+|++|.++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        58 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~  137 (270)
T 3ftp_A           58 TATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNL  137 (270)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhh
Confidence            36889999999999988888899999999999999999999999999999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++++++|.|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       138 ~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  208 (270)
T 3ftp_A          138 KAVFRLSRAVLRPMMKAR--------GGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIG-SRGITVNCVAPG  208 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeC
Confidence            999999999999998876        79999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++....  .......+....|++|+++|+|+|++++||+|+++
T Consensus       209 ~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  253 (270)
T 3ftp_A          209 FIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQA  253 (270)
T ss_dssp             SBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            9999865432  22344556677899999999999999999999765

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.1e-38  Score=246.44  Aligned_cols=198  Identities=24%  Similarity=0.352  Sum_probs=179.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        54 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~  133 (279)
T 3sju_A           54 CARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNL  133 (279)
T ss_dssp             EESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            36899999999999988888899999999999999999999999999999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHH--HHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALK--YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .|++.++++++|  .|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+
T Consensus       134 ~g~~~l~~~~~~~~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~  204 (279)
T 3sju_A          134 TGVFRVTREVLRAGGMREAG--------WGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELA-KTGITVNAVC  204 (279)
T ss_dssp             HHHHHHHHHHHHHSSHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHhchhhHhhcC--------CcEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEe
Confidence            999999999999  577765        68999999999999999999999999999999999999998 8999999999


Q ss_pred             cCcccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++....         .........+....|++|+++|+|+|++++||+|+++
T Consensus       205 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a  262 (279)
T 3sju_A          205 PGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAA  262 (279)
T ss_dssp             ESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGG
T ss_pred             eCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            999999865321         1234555667778899999999999999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.1e-38  Score=242.23  Aligned_cols=198  Identities=27%  Similarity=0.326  Sum_probs=178.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN  117 (280)
T 3tox_A           38 TARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTN  117 (280)
T ss_dssp             CCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
Confidence            479999999999999887888999999999999999999999999999999999999874 4678889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.|++.++++++|.|++++        .|+||++||..+. .+.++...|+++|+|+.+|+++++.|+. ++||+||+|+
T Consensus       118 ~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~  188 (280)
T 3tox_A          118 LTSAFLAAKYQVPAIAALG--------GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELG-ARGIRVNALL  188 (280)
T ss_dssp             THHHHHHHHHHHHHHHHTT--------CEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEE
Confidence            9999999999999999876        7899999999988 7889999999999999999999999999 8999999999


Q ss_pred             cCcccCCCccCCC--ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++.....  .............|++|+++|+|+|++++||+|+.+
T Consensus       189 PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a  239 (280)
T 3tox_A          189 PGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGA  239 (280)
T ss_dssp             ECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             ECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccc
Confidence            9999999765422  223444556677889999999999999999999865

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.3e-38  Score=240.67  Aligned_cols=192  Identities=24%  Similarity=0.290  Sum_probs=173.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++..   +...+++|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.
T Consensus        40 ~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  116 (248)
T 3op4_A           40 ATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLT  116 (248)
T ss_dssp             ESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            6888888888887743   4678999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.++++++|+|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       117 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~  187 (248)
T 3op4_A          117 SIFRLSKAVLRGMMKKR--------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA-SRGVTVNTVAPGF  187 (248)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEeeCC
Confidence            99999999999998876        79999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....  ............|.+|+++|+|+|++++||+|+++
T Consensus       188 v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~  231 (248)
T 3op4_A          188 IETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEA  231 (248)
T ss_dssp             BSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            999876543  23344556677899999999999999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.4e-38  Score=243.03  Aligned_cols=200  Identities=42%  Similarity=0.611  Sum_probs=175.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~  115 (257)
T 3imf_A           36 TGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVL  115 (257)
T ss_dssp             EESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            36899999999999987778899999999999999999999999999999999999988878888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|.|++++.       .|+||++||..+..+.+++..|+++|+|+++|+++++.|+.+++|||||+|+||
T Consensus       116 ~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG  188 (257)
T 3imf_A          116 NGTFYCSQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPG  188 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhhCC-------CcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEEC
Confidence            9999999999999965431       689999999999999999999999999999999999999952459999999999


Q ss_pred             cccCCCccCCC-ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++..... .............|++|+++|+|+|++++||+|+.+
T Consensus       189 ~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  236 (257)
T 3imf_A          189 PIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEA  236 (257)
T ss_dssp             CBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99998754432 122334455677899999999999999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2e-38  Score=243.10  Aligned_cols=197  Identities=22%  Similarity=0.305  Sum_probs=177.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.. ...++.+.+.++|++++++|
T Consensus        41 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N  120 (264)
T 3ucx_A           41 AARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELT  120 (264)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHH
Confidence            36899999999999998888999999999999999999999999999999999999985 44778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++++.|.|.++         +|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       121 ~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~P  190 (264)
T 3ucx_A          121 VFGALRLIQGFTPALEES---------KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELG-EKGIRVNSVLP  190 (264)
T ss_dssp             THHHHHHHHHTHHHHHHH---------TCEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHc---------CCEEEEECcchhccCCCccHHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEec
Confidence            999999999999999875         48999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++....         ...++.........|++|+++|+|+|++++||+|+.+
T Consensus       191 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~  247 (264)
T 3ucx_A          191 GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLA  247 (264)
T ss_dssp             SSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGG
T ss_pred             CccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence            99999865432         1223445566677899999999999999999999865

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2e-38  Score=245.13  Aligned_cols=198  Identities=26%  Similarity=0.379  Sum_probs=178.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVI   76 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~   76 (208)
                      ++|+.++++++.+++.+.+.   ++.++.+|++|+++++++++++.+++|++|++|||||. ....++.+.+.++|++++
T Consensus        41 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~  120 (281)
T 3svt_A           41 VGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTV  120 (281)
T ss_dssp             EESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHH
Confidence            36899999999999987765   68899999999999999999999999999999999998 444678889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.|++.+++++.|.|.+++        +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+
T Consensus       121 ~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~  191 (281)
T 3svt_A          121 DLNVNGTMYVLKHAAREMVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG-ASWVRVNS  191 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--------CEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEE
T ss_pred             HHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEE
Confidence            9999999999999999998876        78999999999999999999999999999999999999998 89999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+|+|++.............+....|++|+++|+|+|++++||+|+.+
T Consensus       192 v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~  242 (281)
T 3svt_A          192 IRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAA  242 (281)
T ss_dssp             EEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             EEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            999999998765432333445666778899999999999999999999865

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=4.9e-38  Score=241.70  Aligned_cols=194  Identities=25%  Similarity=0.348  Sum_probs=174.5

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.+.++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.|
T Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g  130 (270)
T 3is3_A           51 NSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG  130 (270)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence            56778899999998888899999999999999999999999999999999999999887888899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc-ccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~-~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      ++.++++++|.|.+          +|+||++||.. +..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       131 ~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~  199 (270)
T 3is3_A          131 QFFVAREAYRHLTE----------GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG-DKKITVNAVAPGG  199 (270)
T ss_dssp             HHHHHHHHHHHCCT----------TCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHhc----------CCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCC
Confidence            99999999999865          58899999988 567889999999999999999999999998 8999999999999


Q ss_pred             ccCCCccC----------CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVS----------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++...          ....+..........|++|+++|+|+|++++||+|+++
T Consensus       200 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~  255 (270)
T 3is3_A          200 TVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEG  255 (270)
T ss_dssp             BCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             ccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99997642          12234445556677899999999999999999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=4.5e-38  Score=244.29  Aligned_cols=196  Identities=27%  Similarity=0.292  Sum_probs=177.9

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+ .++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|
T Consensus        71 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN  150 (293)
T 3rih_A           71 AARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVN  150 (293)
T ss_dssp             EESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            3688999999999998776 678999999999999999999999999999999999999888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.|++.++++++|.|++++        .|+||++||..+. .+.++...|+++|+|+.+|+++++.|+. ++||+||+|+
T Consensus       151 ~~g~~~l~~~~~~~m~~~~--------~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~  221 (293)
T 3rih_A          151 VKGTVYTVQACLAPLTASG--------RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELA-PRGVTVNAIL  221 (293)
T ss_dssp             THHHHHHHHHTHHHHHHHS--------SCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEe
Confidence            9999999999999998876        7899999999986 7889999999999999999999999999 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++.....  ...........|++|+++|+|+|++++||+|+++
T Consensus       222 PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a  268 (293)
T 3rih_A          222 PGNILTEGLVDMG--EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEA  268 (293)
T ss_dssp             ECSBCCHHHHHTC--HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             cCCCcCcchhhcc--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            9999998654322  3345566677899999999999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.6e-38  Score=241.36  Aligned_cols=194  Identities=27%  Similarity=0.315  Sum_probs=170.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      .|+.+.++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~  138 (267)
T 3u5t_A           59 AGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLK  138 (267)
T ss_dssp             SSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHH
Confidence            46778889999999888888999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.+++.++|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       139 g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~  207 (267)
T 3u5t_A          139 GTFNTLREAAQRLRV----------GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELR-GRDITVNAVAPGP  207 (267)
T ss_dssp             HHHHHHHHHHHHEEE----------EEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEECC
T ss_pred             HHHHHHHHHHHHHhh----------CCeEEEEeChhhccCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEEECC
Confidence            999999999999864          58899999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++..... .......+....|++|+++|+|+|++++||+|+.+
T Consensus       208 v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  252 (267)
T 3u5t_A          208 TATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDG  252 (267)
T ss_dssp             BC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTT
T ss_pred             CcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999765432 22334556677899999999999999999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.4e-37  Score=239.71  Aligned_cols=197  Identities=25%  Similarity=0.319  Sum_probs=171.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC-CCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||+.... ++.+.+.++|++++++|+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~  137 (286)
T 3uve_A           58 ASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINL  137 (286)
T ss_dssp             CCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhh
Confidence            3568889999999988888899999999999999999999999999999999999987765 477889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|+|++++.       +|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       138 ~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG  209 (286)
T 3uve_A          138 AGVWKTVKAGVPHMIAGGR-------GGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELG-QHMIRVNSVHPT  209 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHhCCC-------CcEEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            9999999999999987542       58999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCccCC------------CChHHHHH--hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSK------------LAPEEIRS--KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~------------~~~~~~~~--~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++....            ........  ......| +|+++|+|+|++++||+|+++
T Consensus       210 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a  269 (286)
T 3uve_A          210 HVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEA  269 (286)
T ss_dssp             SBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             cccCCcccccchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccc
Confidence            9999976431            11111111  1334456 789999999999999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.1e-37  Score=240.45  Aligned_cols=197  Identities=25%  Similarity=0.338  Sum_probs=171.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-CCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||+..... +.+.+.++|++++++|+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~  150 (299)
T 3t7c_A           71 MSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNL  150 (299)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             ccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhh
Confidence            35688999999999888889999999999999999999999999999999999999887654 88899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++++++|.|.+++.       .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       151 ~g~~~l~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  222 (299)
T 3t7c_A          151 NGAWITARVAIPHIMAGKR-------GGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELG-PRNIRVNIVCPS  222 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            9999999999999887532       58999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCccCCC------------ChHHH--HHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKL------------APEEI--RSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++.....            .....  ........| +++++|+|+|++++||+|+++
T Consensus       223 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a  282 (299)
T 3t7c_A          223 SVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDA  282 (299)
T ss_dssp             CBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             CccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCccc
Confidence            99999764311            00111  111233345 788999999999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=6.8e-38  Score=237.95  Aligned_cols=195  Identities=26%  Similarity=0.327  Sum_probs=171.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++   +.++..+++|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  112 (247)
T 3rwb_A           36 SDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNL  112 (247)
T ss_dssp             ECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhh
Confidence            368888888888877   66889999999999999999999999999999999999998878888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|+|++++.       .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       113 ~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG  184 (247)
T 3rwb_A          113 TGTFIVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG-KYNITANAVTPG  184 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCC-------CcEEEEECchhhccCCCCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeC
Confidence            9999999999999987642       48999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++..... ............|++|+++|+|+|++++||+|+++
T Consensus       185 ~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~  230 (247)
T 3rwb_A          185 LIESDGVKASP-HNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDA  230 (247)
T ss_dssp             SBCCHHHHTSG-GGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cCcCccccccC-hhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccc
Confidence            99998765432 22222222233788999999999999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-37  Score=237.49  Aligned_cols=198  Identities=23%  Similarity=0.313  Sum_probs=171.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+.++..+.+|++|+++++++++++.+.+ |++|+||||||.....++.+.+.++|+.++++|
T Consensus        51 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  130 (273)
T 1ae1_A           51 CSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTN  130 (273)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence            3688899999999988777789999999999999999999999999 899999999999877788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||+|+|
T Consensus       131 ~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  201 (273)
T 1ae1_A          131 FEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAP  201 (273)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEe
Confidence            9999999999999998765        68999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCC----hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++......    ............|++|+++|+|+|++++||+|+++
T Consensus       202 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  253 (273)
T 1ae1_A          202 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA  253 (273)
T ss_dssp             CSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999997543222    22333445566789999999999999999999764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=8.9e-38  Score=239.66  Aligned_cols=192  Identities=25%  Similarity=0.294  Sum_probs=163.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        58 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  134 (266)
T 3grp_A           58 GTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLT  134 (266)
T ss_dssp             ESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence            57888888877665   667999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       135 g~~~l~~~~~~~~~~~~--------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~  205 (266)
T 3grp_A          135 AASTLTRELIHSMMRRR--------YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIA-SRNITVNCIAPGF  205 (266)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCc
Confidence            99999999999998876        79999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++....  .......+....|++|+++|+|+|++++||+|+++
T Consensus       206 v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~  249 (266)
T 3grp_A          206 IKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEA  249 (266)
T ss_dssp             BCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999876543  23344566677899999999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=5.2e-38  Score=242.37  Aligned_cols=197  Identities=40%  Similarity=0.614  Sum_probs=176.5

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.+++++..+++... +.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        58 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  137 (277)
T 4fc7_A           58 SRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDT  137 (277)
T ss_dssp             ESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhh
Confidence            68888898888888653 67899999999999999999999999999999999999988878888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       138 ~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG  208 (277)
T 4fc7_A          138 SGTFNVSRVLYEKFFRDH--------GGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG-PQNIRVNSLAPG  208 (277)
T ss_dssp             HHHHHHHHHHHHHTHHHH--------CEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEEC
Confidence            999999999999998765        68999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCccCC-CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++.... ..............|++|+++|+|+|++++||+|+.+
T Consensus       209 ~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~  256 (277)
T 4fc7_A          209 PISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLA  256 (277)
T ss_dssp             CBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            9999854322 1223444566677899999999999999999999865

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.3e-37  Score=239.88  Aligned_cols=196  Identities=22%  Similarity=0.302  Sum_probs=175.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        62 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  141 (276)
T 3r1i_A           62 AARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNV  141 (276)
T ss_dssp             EESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHH
Confidence            36889999999999988888899999999999999999999999999999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .+++.++++++|.|++++.       +|+||++||..+..+.  ++...|+++|+|+.+|+++++.|+. ++||+||+|+
T Consensus       142 ~g~~~l~~~~~~~m~~~~~-------~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~  213 (276)
T 3r1i_A          142 TGVFLTAQAAARAMVDQGL-------GGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVS  213 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHcCC-------CcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEe
Confidence            9999999999999988651       3899999999887654  4678999999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++....   ......+....|++|+++|+|+|++++||+|+++
T Consensus       214 PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~  259 (276)
T 3r1i_A          214 PGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLASAAS  259 (276)
T ss_dssp             ECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGG
T ss_pred             eCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999999876542   2234556677899999999999999999999865

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-37  Score=239.75  Aligned_cols=196  Identities=24%  Similarity=0.297  Sum_probs=170.5

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g  139 (280)
T 3pgx_A           60 ASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTG  139 (280)
T ss_dssp             CCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHH
T ss_pred             cCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHH
Confidence            58889999999998888889999999999999999999999999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.++++++|+|++++.       +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+|
T Consensus       140 ~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v  211 (280)
T 3pgx_A          140 TWRTLRATVPAMIEAGN-------GGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELG-EYGIRVNSIHPYSV  211 (280)
T ss_dssp             HHHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHhcCC-------CCEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcc
Confidence            99999999999987642       58999999999999999999999999999999999999998 89999999999999


Q ss_pred             cCCCccCCCChHHH------HHh--hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEI------RSK--ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++.........+      ...  .....|. |+++|+|+|++++||+|+++
T Consensus       212 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~  263 (280)
T 3pgx_A          212 ETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGS  263 (280)
T ss_dssp             CSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGG
T ss_pred             cCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccc
Confidence            99875431100000      000  1122344 68899999999999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.8e-38  Score=240.96  Aligned_cols=194  Identities=21%  Similarity=0.257  Sum_probs=169.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++..+++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        60 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  136 (277)
T 3gvc_A           60 DIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLR  136 (277)
T ss_dssp             ESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888888888777   667889999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       137 g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~  207 (277)
T 3gvc_A          137 GAWLCTKHAAPRMIERG--------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR-SSGIRSNTLLPAF  207 (277)
T ss_dssp             HHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCC
Confidence            99999999999999876        79999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCC--hHHHHHhhhh---hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLA--PEEIRSKATD---YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++......  +.........   ..|.+|+++|+|+|++++||+|+++
T Consensus       208 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a  258 (277)
T 3gvc_A          208 VDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDA  258 (277)
T ss_dssp             BCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCcc
Confidence            99986432111  1111111222   5678899999999999999999875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3e-37  Score=237.43  Aligned_cols=193  Identities=29%  Similarity=0.397  Sum_probs=172.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|++|||||...  ...+.+.+.++|++++++|
T Consensus        42 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN  118 (271)
T 3tzq_B           42 DLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN  118 (271)
T ss_dssp             ECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHH
Confidence            57778888877776   667889999999999999999999999999999999999873  3456788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       119 ~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~P  189 (271)
T 3tzq_B          119 ARGTMLMCKYAIPRLISAG--------GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYG-RHGVRCNAIAP  189 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEEe
Confidence            9999999999999999876        79999999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++..... .......+....|.+|+++|+|+|++++||+|+.+
T Consensus       190 G~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~  236 (271)
T 3tzq_B          190 GLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRA  236 (271)
T ss_dssp             CCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999765433 33445666777899999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-37  Score=239.84  Aligned_cols=196  Identities=29%  Similarity=0.431  Sum_probs=170.8

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++++++.+++...+.++..+.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g  135 (277)
T 3tsc_A           56 ASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTG  135 (277)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             cCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHH
Confidence            37888999999998888889999999999999999999999999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.++++++|.|++++.       +|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+|
T Consensus       136 ~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v  207 (277)
T 3tsc_A          136 TWNTVMAGAPRIIEGGR-------GGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELG-KHSIRVNSVHPGPV  207 (277)
T ss_dssp             HHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSB
T ss_pred             HHHHHHHHHHHHHhcCC-------CCEEEEEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeCCC
Confidence            99999999999988642       58999999999999999999999999999999999999998 89999999999999


Q ss_pred             cCCCccCCCC---------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++......         ............|. |+++|+|+|++++||+|+++
T Consensus       208 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~  260 (277)
T 3tsc_A          208 NTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTVCWLASDES  260 (277)
T ss_dssp             SSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGG
T ss_pred             cCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccc
Confidence            9987543110         01111122233444 78999999999999999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.2e-37  Score=237.23  Aligned_cols=194  Identities=27%  Similarity=0.392  Sum_probs=172.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++..+++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        58 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  134 (277)
T 4dqx_A           58 DVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVK  134 (277)
T ss_dssp             ESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhH
Confidence            68888888877775   667899999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       135 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~  205 (277)
T 4dqx_A          135 GIFLCSKYVIPVMRRNG--------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHA-KEGIRVNAVAPGT  205 (277)
T ss_dssp             HHHHHHHHHHHHHTTTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CcEEEEECchhhCcCCCCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCc
Confidence            99999999999998766        78999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCC----CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++....    .........+....|++|+++|+|+|++++||+|+.+
T Consensus       206 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~  255 (277)
T 4dqx_A          206 IDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRS  255 (277)
T ss_dssp             BCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCcc
Confidence            999863221    1222333346677889999999999999999999865

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=9.6e-38  Score=237.77  Aligned_cols=194  Identities=18%  Similarity=0.144  Sum_probs=158.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++.+|++|+++++++++++.+. |++|++|||||.....++.+.+.++|++++++|+
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  115 (252)
T 3h7a_A           37 GRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMAC  115 (252)
T ss_dssp             EESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHh
Confidence            368999999999999988888999999999999999999999999 9999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE-EEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV-NGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v-~~v~p  159 (208)
                      .|++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+| |+|+|
T Consensus       116 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~n~v~P  186 (252)
T 3h7a_A          116 WAGFVSGRESARLMLAHG--------QGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELM-PKNIHVAHLIID  186 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecC
Confidence            999999999999999876        79999999999999999999999999999999999999998 899999 99999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++......  ..........|.+ +++|+|+|++++||+++++
T Consensus       187 G~v~T~~~~~~~~--~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          187 SGVDTAWVRERRE--QMFGKDALANPDL-LMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             ------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred             CccCChhhhccch--hhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCch
Confidence            9999987654322  1222344455666 8999999999999999653

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=9.6e-37  Score=235.75  Aligned_cols=193  Identities=22%  Similarity=0.282  Sum_probs=169.0

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .+.++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~  135 (281)
T 3s55_A           56 ADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTF  135 (281)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence            67788888888888888999999999999999999999999999999999999988888899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+|+|
T Consensus       136 ~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t  206 (281)
T 3s55_A          136 NTIAAVAPGMIKRN--------YGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV-GYGITVNAVAPGNIET  206 (281)
T ss_dssp             HHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHcC--------CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccC
Confidence            99999999998876        79999999999999999999999999999999999999998 8999999999999999


Q ss_pred             CCccCC-----C-------ChHHHHHh--hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          165 TAGVSK-----L-------APEEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       165 ~~~~~~-----~-------~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++....     .       ........  .....+ +++++|+|+|++++||+|+.+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~  262 (281)
T 3s55_A          207 PMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-APFLKPEEVTRAVLFLVDEAS  262 (281)
T ss_dssp             TTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccccchhhhccccccccccchhHHHHHHHhhhccC-cCCCCHHHHHHHHHHHcCCcc
Confidence            976431     0       00111111  112223 788999999999999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.8e-37  Score=238.68  Aligned_cols=197  Identities=25%  Similarity=0.334  Sum_probs=167.9

Q ss_pred             CC-cHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R-~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +| +.++++++.+++... +.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|
T Consensus        56 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN  135 (281)
T 3v2h_A           56 GFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN  135 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            46 677888888888765 5678999999999999999999999999999999999999888888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.|++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       136 ~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~P  206 (281)
T 3v2h_A          136 LSSSFHTIRGAIPPMKKKG--------WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVA-ESGVTVNSICP  206 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEC
Confidence            9999999999999999876        79999999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChH----------HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPE----------EIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++........          .....+....|.+|+++|+|+|++++||+|+++
T Consensus       207 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a  264 (281)
T 3v2h_A          207 GYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDA  264 (281)
T ss_dssp             CSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGG
T ss_pred             CCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCc
Confidence            999999765432211          111234556789999999999999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=4.3e-37  Score=236.24  Aligned_cols=188  Identities=27%  Similarity=0.349  Sum_probs=173.3

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.+.++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.|+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~  141 (269)
T 4dmm_A           62 SAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGV  141 (269)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHH
T ss_pred             ChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHH
Confidence            77888899999988888899999999999999999999999999999999999998888888899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.++++++|.|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||+|+
T Consensus       142 ~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~  212 (269)
T 4dmm_A          142 FLCSRAAAKIMLKQR--------SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA-SRGITVNAVAPGFIA  212 (269)
T ss_dssp             HHHHHHHHHHHHHHT--------CCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBT
T ss_pred             HHHHHHHHHHHHHcC--------CcEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEECCCc
Confidence            999999999998876        78999999999999999999999999999999999999998 899999999999999


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |++...     ..........|++|+++|+|+|++++||+|+
T Consensus       213 T~~~~~-----~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~  249 (269)
T 4dmm_A          213 TDMTSE-----LAAEKLLEVIPLGRYGEAAEVAGVVRFLAAD  249 (269)
T ss_dssp             TSCSCH-----HHHHHHGGGCTTSSCBCHHHHHHHHHHHHHC
T ss_pred             Cccccc-----ccHHHHHhcCCCCCCCCHHHHHHHHHHHhCC
Confidence            986532     2224556778999999999999999999997

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=237.97  Aligned_cols=197  Identities=22%  Similarity=0.350  Sum_probs=174.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+|++|+||||||.. ...++.+.+.++|++++++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~  117 (262)
T 1zem_A           38 DMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV  117 (262)
T ss_dssp             ESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhh
Confidence            6888899999999987777899999999999999999999999999999999999987 556778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.|.|++++        .|+||++||..+..+.++...|+++|+++.+|+++++.|+. ++||+||+|+||
T Consensus       118 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG  188 (262)
T 1zem_A          118 TGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA-PYNIRVNAISPG  188 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEecC
Confidence            999999999999998865        68999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCC------------CC-hHH-HHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSK------------LA-PEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++....            .. .+. ....+....|++|+++|+|+|++++||+|+.+
T Consensus       189 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  249 (262)
T 1zem_A          189 YMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDS  249 (262)
T ss_dssp             SBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGG
T ss_pred             CcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999875331            11 122 33344456789999999999999999999865

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4.5e-37  Score=234.97  Aligned_cols=195  Identities=28%  Similarity=0.332  Sum_probs=173.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        39 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  115 (259)
T 4e6p_A           39 DIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVA  115 (259)
T ss_dssp             ESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence            68888888888777   557889999999999999999999999999999999999988788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.|.|++++.       +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       116 g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~  187 (259)
T 4e6p_A          116 GTLFTLQAAARQMIAQGR-------GGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI-KHRINVNAIAPGV  187 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcCC-------CeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEECC
Confidence            999999999999987642       58999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++....         ....+.........|++|+++|+|+|++++||+|+++
T Consensus       188 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~  242 (259)
T 4e6p_A          188 VDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAES  242 (259)
T ss_dssp             BCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGG
T ss_pred             CccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            999865432         0122334455677899999999999999999999865

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.2e-37  Score=236.00  Aligned_cols=192  Identities=26%  Similarity=0.312  Sum_probs=172.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      .|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        63 ~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  142 (271)
T 3v2g_A           63 VNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFR  142 (271)
T ss_dssp             SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            35677889999999888888999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.+++++.|.|.+          .|+||++||..+..+ .++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       143 g~~~~~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG  211 (271)
T 3v2g_A          143 APFVAIRSASRHLGD----------GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLG-PRGITVNIVHPG  211 (271)
T ss_dssp             HHHHHHHHHHHHCCT----------TCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhc----------CCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecC
Confidence            999999999999854          588999999877665 78999999999999999999999999 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++.....   ..........|.+|+++|+|+|++++||+|+.+
T Consensus       212 ~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~  255 (271)
T 3v2g_A          212 STDTDMNPADG---DHAEAQRERIATGSYGEPQDIAGLVAWLAGPQG  255 (271)
T ss_dssp             SBCSSSSCSSC---SSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCcCCcccccc---hhHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            99999765432   223445567899999999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-37  Score=238.37  Aligned_cols=192  Identities=26%  Similarity=0.345  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus         6 ~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      +.++++.+++...+.++.++.+|++|.+++.++.+ ..+++|++|+||||||.....++.+.+.++|++++++|+.|++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~  143 (273)
T 3uf0_A           65 DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWV  143 (273)
T ss_dssp             THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHH
Confidence            45677888888777789999999999999999954 45567999999999999888888899999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                      ++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+|+|+
T Consensus       144 l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~  214 (273)
T 3uf0_A          144 LSRSFGTAMLAHG--------SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWA-GRGVGVNALAPGYVVTA  214 (273)
T ss_dssp             HHHHHHHHHHHHT--------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSG
T ss_pred             HHHHHHHHHHhcC--------CCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCC
Confidence            9999999999876        79999999999999999999999999999999999999998 89999999999999998


Q ss_pred             CccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +.............+....|++|+++|+|+|++++||+|+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a  256 (273)
T 3uf0_A          215 NTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAA  256 (273)
T ss_dssp             GGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             chhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence            765433334455666778899999999999999999999865

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-37  Score=238.45  Aligned_cols=197  Identities=22%  Similarity=0.295  Sum_probs=154.3

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC--CCCCCCCCCCHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--NFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~--~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      |+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.  ....++.+.+.++|++++++|+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  141 (280)
T 4da9_A           62 GDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNL  141 (280)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHH
T ss_pred             CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhh
Confidence            57888999999998888889999999999999999999999999999999999998  4456788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++++++|.|++++.+     ..|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       142 ~g~~~l~~~~~~~~~~~~~~-----~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  215 (280)
T 4da9_A          142 RGTVFFTQAVLKAMLASDAR-----ASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLA-ETGIAVFEVRPG  215 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHCCC-----CCEEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCC-----CCCEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEeec
Confidence            99999999999999875421     157999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhh-hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++......  ........ ..|++|+++|+|+|++++||+|+++
T Consensus       216 ~v~T~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  261 (280)
T 4da9_A          216 IIRSDMTAAVSG--KYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQF  261 (280)
T ss_dssp             CBCC------------------------CCBCHHHHHHHHHHHHTSTT
T ss_pred             CCcCCchhhcch--hHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccc
Confidence            999987654321  12222223 6789999999999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=8.9e-37  Score=231.72  Aligned_cols=196  Identities=26%  Similarity=0.241  Sum_probs=179.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++...+.++.++.+|++|+++++++++++.++++++|++|||||.....++.+.+.++|+.++++|+
T Consensus        35 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~  114 (247)
T 3lyl_A           35 TATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNL  114 (247)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHh
Confidence            36889999999999988888899999999999999999999999999999999999998888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|.+++        .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|++|+||
T Consensus       115 ~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG  185 (247)
T 3lyl_A          115 SSIFRMSKECVRGMMKKR--------WGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVA-SRNITVNVVAPG  185 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeC
Confidence            999999999999998876        78999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++....  ............|.+++.+|+|+|++++||+++++
T Consensus       186 ~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~  230 (247)
T 3lyl_A          186 FIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEA  230 (247)
T ss_dssp             SBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred             cEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCc
Confidence            9999876543  23344556677889999999999999999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=7.8e-37  Score=231.97  Aligned_cols=195  Identities=30%  Similarity=0.374  Sum_probs=173.6

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +| +.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        35 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  114 (246)
T 2uvd_A           35 YAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNL  114 (246)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             eCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            46 88889999898887777889999999999999999999999999999999999988777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|++++        .++||++||..+..+.++...|+++|+++.+|+++++.|+. ++||+||+|+||
T Consensus       115 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  185 (246)
T 2uvd_A          115 KGVFLCTKAVSRFMMRQR--------HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELA-SRNITVNAIAPG  185 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEec
Confidence            999999999999998765        68999999999998999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.....  ......+....|.+++++|+|+|++++||+++++
T Consensus       186 ~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  230 (246)
T 2uvd_A          186 FIATDMTDVLD--ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQS  230 (246)
T ss_dssp             SBGGGCSSCCC--TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cccCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99998754321  2223334456788899999999999999998764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.2e-37  Score=235.64  Aligned_cols=197  Identities=18%  Similarity=0.165  Sum_probs=172.6

Q ss_pred             CCcHHH--HHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++  ++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  112 (258)
T 3a28_C           33 DLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVN  112 (258)
T ss_dssp             ECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhc
Confidence            577777  888888887777789999999999999999999999999999999999998877778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.+++.+.|.|++++        . |+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+
T Consensus       113 ~~g~~~~~~~~~~~~~~~~--------~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~  183 (258)
T 3a28_C          113 VFSVFFGIQAASRKFDELG--------VKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELA-PKGHTVNAYA  183 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHhcC--------CCcEEEEECcchhccCCCCchhHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEE
Confidence            9999999999999998765        4 8999999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCC--------C-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKL--------A-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++.....        . .......+....|++|+++|+|+|++++||+|+.+
T Consensus       184 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  241 (258)
T 3a28_C          184 PGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENS  241 (258)
T ss_dssp             ECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            9999998653211        0 01222334455788899999999999999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-37  Score=240.30  Aligned_cols=196  Identities=21%  Similarity=0.231  Sum_probs=174.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++..+.+|++|.++++++++++.+. |++|++|||||.....++.+.+.++|+.++++|+.
T Consensus        64 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  142 (275)
T 4imr_A           64 GVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLG  142 (275)
T ss_dssp             ESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             cCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            68888899999999888888999999999999999999999887 99999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       143 g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~  213 (275)
T 4imr_A          143 STVDMLQSALPKMVARK--------WGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFA-GDNVLLNTLAPGL  213 (275)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecc
Confidence            99999999999998876        79999999999999988999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCC-hHHHHHhhhhhh-cCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLA-PEEIRSKATDYM-AAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++...... ............ |++|+++|+|+|++++||+|+++
T Consensus       214 v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a  261 (275)
T 4imr_A          214 VDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEAC  261 (275)
T ss_dssp             BCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred             ccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCccc
Confidence            99986543211 122233344445 89999999999999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.6e-37  Score=235.73  Aligned_cols=191  Identities=21%  Similarity=0.266  Sum_probs=170.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++   +.++.++.+|++|+++++++++++.+.+|++|++|||||.....++.+.+.++|++++++|+
T Consensus        38 ~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  114 (255)
T 4eso_A           38 TGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNT  114 (255)
T ss_dssp             EESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            368888888888777   45788999999999999999999999999999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++++.|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||
T Consensus       115 ~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG  183 (255)
T 4eso_A          115 KGAFFTVQRLTPLIRE----------GGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELL-PRGIRVNSVSPG  183 (255)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhc----------CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEecC
Confidence            9999999999998754          58899999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCccCCC-Ch---HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          161 PIKDTAGVSKL-AP---EEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       161 ~v~t~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+|++..... .+   ..+........|++|+++|+|+|++++||+|+
T Consensus       184 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  232 (255)
T 4eso_A          184 FIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE  232 (255)
T ss_dssp             SBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT
T ss_pred             cccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999765422 22   12233455668999999999999999999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=8.5e-37  Score=237.29  Aligned_cols=194  Identities=23%  Similarity=0.161  Sum_probs=165.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~   77 (208)
                      +|+.+.. +..+++.+...++.++.+|++|.++++++++++.+++|++|+||||||+..    ..++.+.+.++|+++++
T Consensus        64 ~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~  142 (293)
T 3grk_A           64 YQGDALK-KRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTML  142 (293)
T ss_dssp             ECSHHHH-HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHH
T ss_pred             cCCHHHH-HHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHH
Confidence            4664333 334444443346889999999999999999999999999999999999876    46778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.++++++|.|.+          .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|
T Consensus       143 ~N~~g~~~l~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v  211 (293)
T 3grk_A          143 ISVYSLTAVSRRAEKLMAD----------GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLG-PQNIRVNAI  211 (293)
T ss_dssp             HHTHHHHHHHHHHHHHTTT----------CEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhccC----------CCEEEEEeehhhccCCCchHHHHHHHHHHHHHHHHHHHHHh-HhCCEEEEE
Confidence            9999999999999999865          58999999999999999999999999999999999999999 899999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++..................|++|+++|+|+|++++||+|+.+
T Consensus       212 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  261 (293)
T 3grk_A          212 SAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLS  261 (293)
T ss_dssp             EECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             ecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            99999998766554445556667778899999999999999999999865

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.3e-36  Score=228.68  Aligned_cols=193  Identities=25%  Similarity=0.286  Sum_probs=169.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  117 (247)
T 2jah_A           38 ARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL  117 (247)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTH
T ss_pred             ECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhH
Confidence            68889999999999877778999999999999999999999999999999999999987778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.++++++|.|+++         +|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       118 g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  187 (247)
T 2jah_A          118 GLMYMTRAALPHLLRS---------KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT-ERGVRVVVIEPGT  187 (247)
T ss_dssp             HHHHHHHHHHHHHHHH---------TCEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHC---------CCEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCC
Confidence            9999999999999875         37899999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCC--CCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKF--GEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++...... ..... .....| +++  ++|+|+|++++||+++.+
T Consensus       188 v~T~~~~~~~~-~~~~~-~~~~~~-~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          188 TDTELRGHITH-TATKE-MYEQRI-SQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             BSSSGGGGCCC-HHHHH-HHHHHT-TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             CCCcchhcccc-hhhHH-HHHhcc-cccCCCCHHHHHHHHHHHhCCCc
Confidence            99997544322 21111 122334 555  899999999999999865

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.4e-36  Score=232.37  Aligned_cols=197  Identities=25%  Similarity=0.328  Sum_probs=167.0

Q ss_pred             CCcHHH-HHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTV-LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~-~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++ ++++.+++... +.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+.++++|
T Consensus        35 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N  114 (260)
T 1x1t_A           35 GFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN  114 (260)
T ss_dssp             CCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence            677777 88888888765 6678899999999999999999999999999999999998877777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       115 ~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~P  185 (260)
T 1x1t_A          115 LSAVFHGTAAALPHMKKQG--------FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA-GQGITANAICP  185 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcC--------CCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHHHHHHHhc-cCCEEEEEEee
Confidence            9999999999999998765        68999999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCCh---------HHHHHhh-hhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAP---------EEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++.......         +.....+ ....|.+++++|+|+|++++||+++.+
T Consensus       186 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~  243 (260)
T 1x1t_A          186 GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAA  243 (260)
T ss_dssp             CCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred             cCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhh
Confidence            99999975432110         1122223 445688899999999999999999764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=8.9e-37  Score=234.29  Aligned_cols=197  Identities=31%  Similarity=0.445  Sum_probs=172.4

Q ss_pred             CCcHHHHHHHHHHH-HhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++ ...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        52 ~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  131 (267)
T 1vl8_A           52 SRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNL  131 (267)
T ss_dssp             ESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhh
Confidence            68888888888888 44567888999999999999999999999999999999999988777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc-ccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~-~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .|++.++++++|.|++++        .|+||++||.. +..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       132 ~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  202 (267)
T 1vl8_A          132 FGTYYVCREAFSLLRESD--------NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAP  202 (267)
T ss_dssp             HHHHHHHHHHHHHHTTCS--------SCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            999999999999998765        68999999998 888889999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++.............+....|++++++|+|+|++++||+++.+
T Consensus       203 G~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  250 (267)
T 1vl8_A          203 GWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA  250 (267)
T ss_dssp             CCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             ccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999998754211112233334456788899999999999999999864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.1e-36  Score=232.94  Aligned_cols=197  Identities=28%  Similarity=0.396  Sum_probs=173.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+++ +++|+||||||.....++.+.+.++|+.++++|+
T Consensus        40 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  119 (260)
T 2ae2_A           40 SRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF  119 (260)
T ss_dssp             ESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            688889999989888777788899999999999999999999999 8999999999988777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus       120 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  190 (260)
T 2ae2_A          120 EAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPG  190 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTS--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCcchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecC
Confidence            999999999999998865        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHH---hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRS---KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++............   .+....|++++++|+|+|++++||+++++
T Consensus       191 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~  240 (260)
T 2ae2_A          191 VIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAA  240 (260)
T ss_dssp             SBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            999986543222111112   34455788899999999999999999764

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.8e-36  Score=232.44  Aligned_cols=198  Identities=25%  Similarity=0.359  Sum_probs=168.7

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++.+.+ .++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|
T Consensus        53 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n  132 (266)
T 3o38_A           53 SDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVT  132 (266)
T ss_dssp             EESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             ecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHH
Confidence            3688999999999997664 578999999999999999999999999999999999999888888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|.|++++.       .++||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       133 ~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~P  204 (266)
T 3o38_A          133 LTSVMRATRAALRYFRGVDH-------GGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAV-EFGVRINAVSP  204 (266)
T ss_dssp             THHHHHHHHHHHHHHHTSSC-------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCC-------CeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeC
Confidence            99999999999999987631       68999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++...... ......+....|++|+.+|+|+|++++||+++.+
T Consensus       205 G~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~  251 (266)
T 3o38_A          205 SIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAATIAFLASDYS  251 (266)
T ss_dssp             CCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             CcccchhhhccCc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence            9999987654332 3344556667788999999999999999999864

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-37  Score=237.82  Aligned_cols=193  Identities=20%  Similarity=0.191  Sum_probs=168.4

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+.++++++.+++...  +.++.++.+|++|+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++
T Consensus        67 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v  146 (287)
T 3rku_A           67 ARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT  146 (287)
T ss_dssp             ESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred             ECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence            68999999999999875  567889999999999999999999999999999999999876 567888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.|++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+
T Consensus       147 N~~g~~~l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~  217 (287)
T 3rku_A          147 NVTALINITQAVLPIFQAKN--------SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELI-NTKIRVILIA  217 (287)
T ss_dssp             HTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcC--------CCeEEEECChhhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEe
Confidence            99999999999999998876        79999999999999999999999999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCC--ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++.....  ......    .......+.+|+|+|++++||+|+.+
T Consensus       218 PG~v~T~~~~~~~~~~~~~~~----~~~~~~~p~~pedvA~~v~~l~s~~~  264 (287)
T 3rku_A          218 PGLVETEFSLVRYRGNEEQAK----NVYKDTTPLMADDVADLIVYATSRKQ  264 (287)
T ss_dssp             ESCEESSHHHHHTTTCHHHHH----HHHTTSCCEEHHHHHHHHHHHHTSCT
T ss_pred             CCcCcCccccccccCcHHHHH----HhhcccCCCCHHHHHHHHHHHhCCCC
Confidence            9999998643221  111111    22223345599999999999999876

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4e-36  Score=235.91  Aligned_cols=196  Identities=25%  Similarity=0.368  Sum_probs=170.0

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g  169 (317)
T 3oec_A           90 GSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIG  169 (317)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHH
T ss_pred             cCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence            45788899999998888899999999999999999999999999999999999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.++++++|.|++++.       +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+|
T Consensus       170 ~~~l~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v  241 (317)
T 3oec_A          170 AWHACRAVLPSMIERGQ-------GGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVG-RHNIRVNSVNPGAV  241 (317)
T ss_dssp             HHHHHHHHHHHHHHTCS-------CEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHHcCC-------CCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcc
Confidence            99999999999987642       58999999999999999999999999999999999999998 89999999999999


Q ss_pred             cCCCccCC------------CChHHHHHh--hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSK------------LAPEEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~------------~~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++....            .........  .....| +++++|+|+|++++||+|+.+
T Consensus       242 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av~fL~s~~a  299 (317)
T 3oec_A          242 NTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAVAWLASDEA  299 (317)
T ss_dssp             SSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHHHHHTSGGG
T ss_pred             cCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-CCCCCHHHHHHHHHHHcCCcc
Confidence            99864321            111111111  112233 678899999999999999875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-36  Score=230.39  Aligned_cols=191  Identities=18%  Similarity=0.159  Sum_probs=166.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||...+ .++.+.+.++|++++++|+
T Consensus        35 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~  111 (254)
T 3kzv_A           35 ARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF  111 (254)
T ss_dssp             ESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhh
Confidence            58888888887776   4578899999999999999999999999999999999998654 7888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++++++|.|+++         +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+.   ||+||+|+||
T Consensus       112 ~g~~~~~~~~~~~m~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~i~vn~v~PG  179 (254)
T 3kzv_A          112 FSIVSLVGIALPELKKT---------NGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEER---QVKAIAVAPG  179 (254)
T ss_dssp             HHHHHHHHHHHHHHHHH---------TCEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHHHHHHHCT---TSEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHhc---------CCeEEEEcCchhccCCCCcchHHHHHHHHHHHHHHHHhhcc---CcEEEEEeCC
Confidence            99999999999999875         48999999999999999999999999999999999999973   7999999999


Q ss_pred             cccCCCccCCCC-------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLA-------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++......       ..+....+....|++|+++|+|+|++++||+|+.+
T Consensus       180 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~  233 (254)
T 3kzv_A          180 IVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGI  233 (254)
T ss_dssp             SCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCC
T ss_pred             cccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcc
Confidence            999998654321       34455667778899999999999999999999873

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=9.9e-37  Score=233.84  Aligned_cols=178  Identities=19%  Similarity=0.157  Sum_probs=159.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.++++++++++.+.+|++|+||||||.....++.+.+.++|++++++|+.|++.++++++|.|++++  
T Consensus        60 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--  137 (266)
T 3p19_A           60 NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN--  137 (266)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--
T ss_pred             CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--
Confidence            577899999999999999999999999999999999998888888999999999999999999999999999999876  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                            .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+|+|++..............
T Consensus       138 ------~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~  210 (266)
T 3p19_A          138 ------CGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA-ASNVRVMTIAPSAVKTELLSHTTSQQIKDGYD  210 (266)
T ss_dssp             ------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGGCSCHHHHHHHH
T ss_pred             ------CcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCccccchhhcccchhhhHHHH
Confidence                  79999999999999999999999999999999999999998 89999999999999999866544332222222


Q ss_pred             hhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          181 TDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       181 ~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ....|++|+++|+|+|++++||+++..
T Consensus       211 ~~~~~~~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          211 AWRVDMGGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHTTCCBCHHHHHHHHHHHHHSCT
T ss_pred             hhcccccCCCCHHHHHHHHHHHHcCCC
Confidence            224588999999999999999998764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-36  Score=230.52  Aligned_cols=194  Identities=22%  Similarity=0.275  Sum_probs=176.8

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++.++..+++...+.++.++.+|++|.++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g  125 (256)
T 3ezl_A           46 PNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTS  125 (256)
T ss_dssp             TTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHH
T ss_pred             CCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence            66677788888888878889999999999999999999999999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||++
T Consensus       126 ~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v  196 (256)
T 3ezl_A          126 LFNVTKQVIDGMVERG--------WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYI  196 (256)
T ss_dssp             HHHHHHHHHHHHHHHT--------CEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHhcC--------CCEEEEEcchhhccCCCCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEEECcc
Confidence            9999999999999876        68999999999999999999999999999999999999998 88999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++....  ............|.+++++|+|+|++++||+|+++
T Consensus       197 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  239 (256)
T 3ezl_A          197 GTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEES  239 (256)
T ss_dssp             CCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             cCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            99876543  23445566777899999999999999999999764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.5e-37  Score=238.30  Aligned_cols=194  Identities=24%  Similarity=0.202  Sum_probs=167.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~   77 (208)
                      +|+.+..+.+.+.....+ .+.+++||++|+++++++++++.+++|++|+||||||+...    .++.+.+.++|++.++
T Consensus        63 ~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~  141 (296)
T 3k31_A           63 YLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMH  141 (296)
T ss_dssp             ESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHH
T ss_pred             eCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHH
Confidence            466555444444444333 57889999999999999999999999999999999998864    6778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.++++++|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|
T Consensus       142 vN~~g~~~l~~~~~~~m~~----------~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~v  210 (296)
T 3k31_A          142 ISCYSFTYIASKAEPLMTN----------GGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLG-KQQIRVNAI  210 (296)
T ss_dssp             HHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhhc----------CCEEEEEEehhhccCCCCchhhHHHHHHHHHHHHHHHHHHh-hcCcEEEEE
Confidence            9999999999999998865          58999999999999999999999999999999999999999 899999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++..................|++|+++|+|+|++++||+|+.+
T Consensus       211 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a  260 (296)
T 3k31_A          211 SAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLG  260 (296)
T ss_dssp             EECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             EECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99999998765433333445566677899999999999999999999865

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-36  Score=232.26  Aligned_cols=197  Identities=26%  Similarity=0.358  Sum_probs=172.1

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~   78 (208)
                      +|+.++++++.+++...  +.++.++.+|++|+++++++++++.+++|++|+||||||.... .++.+.+.++|++++++
T Consensus        44 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~  123 (267)
T 1iy8_A           44 DVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSI  123 (267)
T ss_dssp             ESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence            68888899888888765  6678999999999999999999999999999999999998766 67788899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+
T Consensus       124 N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~  194 (267)
T 1iy8_A          124 NLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIA  194 (267)
T ss_dssp             HTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHcC--------CCEEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEE
Confidence            99999999999999998875        68999999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCC----C--ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSK----L--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++....    .  ........+....|++|+++|+|+|++++||+++++
T Consensus       195 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~  249 (267)
T 1iy8_A          195 PGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA  249 (267)
T ss_dssp             ECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             eCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999999864321    0  011111134455688899999999999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=9.5e-38  Score=239.08  Aligned_cols=192  Identities=22%  Similarity=0.286  Sum_probs=162.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~  124 (262)
T 3ksu_A           45 AKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNK  124 (262)
T ss_dssp             GGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            46778899999999888888999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|..          .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|+||+
T Consensus       125 g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~  193 (262)
T 3ksu_A          125 VAYFFIKQAAKHMNP----------NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELM-KQQISVNAIAPGP  193 (262)
T ss_dssp             HHHHHHHHHHTTEEE----------EEEEEEECCCHHHHHHCCCCC-----CHHHHHHHHHHHHTT-TTTCEEEEEEECC
T ss_pred             HHHHHHHHHHHhhcC----------CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCC
Confidence            999999999998833          58999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|++...... ...........|.+|+.+|+|+|++++||+|+
T Consensus       194 v~T~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~  236 (262)
T 3ksu_A          194 MDTSFFYGQET-KESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD  236 (262)
T ss_dssp             CCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred             CcCccccccCc-hHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence            99987654322 22334455667889999999999999999997

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.1e-36  Score=231.70  Aligned_cols=197  Identities=24%  Similarity=0.284  Sum_probs=172.7

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++... +.++.++.+|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|+.++++|+
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~  117 (263)
T 3ai3_A           38 ARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLV  117 (263)
T ss_dssp             ESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            68888898888888765 67889999999999999999999999999999999999988777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||+|+||
T Consensus       118 ~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  188 (263)
T 3ai3_A          118 MAAVRLARGLVPGMRARG--------GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI-KDNIRVNCINPG  188 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEECchhhcCCCCCcchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecC
Confidence            999999999999998765        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCC---------hHHHHHhhhhh-hcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLA---------PEEIRSKATDY-MAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++......         .......+... .|.+++++|+|+|++++||+++++
T Consensus       189 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  245 (263)
T 3ai3_A          189 LILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERA  245 (263)
T ss_dssp             CBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTC
T ss_pred             cccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999986432100         12222333344 788899999999999999999764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.8e-36  Score=230.98  Aligned_cols=193  Identities=21%  Similarity=0.236  Sum_probs=160.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+
T Consensus        34 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~  113 (264)
T 3tfo_A           34 GARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNI  113 (264)
T ss_dssp             EESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            36899999999999988888899999999999999999999999999999999999998878888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+  + |||||+|+||
T Consensus       114 ~g~~~l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~--~-gIrvn~v~PG  182 (264)
T 3tfo_A          114 KGVLWGIGAVLPIMEAQR--------SGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES--T-NIRVTCVNPG  182 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHC--S-SEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCC--------CeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHHHHHHhC--C-CCEEEEEecC
Confidence            999999999999998876        7999999999999999999999999999999999999997  4 9999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++.......... ...  ......+++|+|+|++++||+++.+
T Consensus       183 ~v~T~~~~~~~~~~~~-~~~--~~~~~~~~~pedvA~~v~~l~s~~~  226 (264)
T 3tfo_A          183 VVESELAGTITHEETM-AAM--DTYRAIALQPADIARAVRQVIEAPQ  226 (264)
T ss_dssp             CC--------------------------CCCHHHHHHHHHHHHHSCT
T ss_pred             CCcCcccccccchhHH-HHH--HhhhccCCCHHHHHHHHHHHhcCCc
Confidence            9999876543221111 000  0111235799999999999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.9e-36  Score=230.31  Aligned_cols=187  Identities=20%  Similarity=0.179  Sum_probs=161.0

Q ss_pred             CCCcHHHHHHHHHHHHhc--C-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE   77 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~   77 (208)
                      ++|+.++++++.+++...  + .++.++.+|++|.+++.++++++.+++|++|+||||||.....++ +.+.++|+++++
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~  115 (250)
T 3nyw_A           37 IARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIME  115 (250)
T ss_dssp             EESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHH
Confidence            368999999999998775  3 578899999999999999999999999999999999999877777 788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|
T Consensus       116 vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v  186 (250)
T 3nyw_A          116 INVIAQYGILKTVTEIMKVQK--------NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELA-PLGIRVTTL  186 (250)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT--------CEEEEEECC-------CCTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCC--------CeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEE
Confidence            999999999999999998876        79999999999999777799999999999999999999998 899999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++...          .....+..++++|+|+|++++||+++.+
T Consensus       187 ~PG~v~T~~~~~----------~~~~~~~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          187 CPGWVNTDMAKK----------AGTPFKDEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             EESSBCSHHHHH----------TTCCSCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             ecCcccCchhhh----------cCCCcccccCCCHHHHHHHHHHHHcCCC
Confidence            999999875432          1223456678999999999999999765

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-36  Score=231.61  Aligned_cols=198  Identities=24%  Similarity=0.284  Sum_probs=172.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  112 (256)
T 1geg_A           33 DYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVK  112 (256)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888999999988877778999999999999999999999999999999999999887777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++.       .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||+
T Consensus       113 g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  184 (256)
T 1geg_A          113 GVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLA-PLGITVNGYCPGI  184 (256)
T ss_dssp             HHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcCC-------CCEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECC
Confidence            999999999999987531       37999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCC---------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.....         ........+....|++|+++|+|+|++++||+++++
T Consensus       185 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  239 (256)
T 1geg_A          185 VKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDS  239 (256)
T ss_dssp             BSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9998643210         011222334455688899999999999999999864

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.1e-36  Score=232.92  Aligned_cols=193  Identities=25%  Similarity=0.340  Sum_probs=159.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      .|+.+.+++..+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.. ...++.+.+.++|++++++|+
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~  119 (259)
T 3edm_A           40 NGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL  119 (259)
T ss_dssp             CSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHH
Confidence            5677888888999988888899999999999999999999999999999999999987 557888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .|++.++++++|.|++          +|+||++||..+. .+.++...|+++|+|+++|+++++.|+. ++ |+||+|+|
T Consensus       120 ~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~-I~vn~v~P  187 (259)
T 3edm_A          120 TSLFLTAKTALPKMAK----------GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG-PK-IRVNAVCP  187 (259)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhc----------CCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEEEE
Confidence            9999999999999865          4889999999988 7889999999999999999999999998 76 99999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++...... .+....+....|++|+++|+|+|++++||+|+.+
T Consensus       188 G~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~  234 (259)
T 3edm_A          188 GMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFLASDDA  234 (259)
T ss_dssp             CCBCC-----------------------CCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9999987654322 3344556677899999999999999999999875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=4.3e-36  Score=229.63  Aligned_cols=197  Identities=25%  Similarity=0.326  Sum_probs=173.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++..+.+|++|.++++++++++.+.+|++|+||||||... ..++.+.+.++|++++++|+
T Consensus        45 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~  124 (260)
T 2zat_A           45 SRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV  124 (260)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            68888899998988877778899999999999999999999999999999999999864 35677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||.|+||
T Consensus       125 ~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  195 (260)
T 2zat_A          125 KATVLMTKAVVPEMEKRG--------GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPG  195 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEEC
Confidence            999999999999998865        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++..................|.+++++|+|+|++++||+++++
T Consensus       196 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~  242 (260)
T 2zat_A          196 LIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDA  242 (260)
T ss_dssp             SBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGG
T ss_pred             cccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            99998653211122222334556788999999999999999999764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.3e-36  Score=229.79  Aligned_cols=195  Identities=21%  Similarity=0.260  Sum_probs=173.5

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.+.+++..+++...+.++.++.+|++|.++++++++++.+++|++|+||||||.....++.+.+.++|+.++++|+.+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~  137 (269)
T 3gk3_A           58 ERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDA  137 (269)
T ss_dssp             SCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHH
T ss_pred             CchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHH
Confidence            66777888888887777889999999999999999999999999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+|++|+||+|
T Consensus       138 ~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v  208 (269)
T 3gk3_A          138 MFNVTKQFIAGMVERR--------FGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA-KRGITVNTVSPGYL  208 (269)
T ss_dssp             HHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHhcC--------CCEEEEeCChhhccCCCCcchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCcc
Confidence            9999999999998876        79999999999999999999999999999999999999998 88999999999999


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|++..... ............|.+++.+|+|+|++++||+++.+
T Consensus       209 ~T~~~~~~~-~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~  252 (269)
T 3gk3_A          209 ATAMVEAVP-QDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDA  252 (269)
T ss_dssp             CCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTC
T ss_pred             cchhhhhhc-hhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCc
Confidence            998765432 22222245667888999999999999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=8e-37  Score=237.58  Aligned_cols=192  Identities=26%  Similarity=0.329  Sum_probs=170.4

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      .+.++++.+.+...+.++.++.+|++|+++++++++++.+++|++|++|||||... ..++.+.+.++|++++++|+.|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~  164 (294)
T 3r3s_A           85 EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFAL  164 (294)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHH
T ss_pred             hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHH
Confidence            45677888888877888999999999999999999999999999999999999865 36778899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.++++++|.|.+          +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+|+
T Consensus       165 ~~l~~~~~~~~~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~  233 (294)
T 3r3s_A          165 FWITQEAIPLLPK----------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIW  233 (294)
T ss_dssp             HHHHHHHGGGCCT----------TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHhhc----------CCEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCc
Confidence            9999999998754          58899999999999999999999999999999999999998 889999999999999


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++.............+....|++|+++|+|+|++++||+|+++
T Consensus       234 t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~  277 (294)
T 3r3s_A          234 TALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQES  277 (294)
T ss_dssp             SHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             cccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            98744333333344556677899999999999999999999875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=9.4e-36  Score=231.25  Aligned_cols=198  Identities=19%  Similarity=0.258  Sum_probs=170.8

Q ss_pred             CcHHHHHHHHHHHH-hcCCCeeEEEcCCCCHH-----------------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCC
Q 028508            3 RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE-----------------DAVRVVESTINHFGKLDILVNAAAGNFLVPA   64 (208)
Q Consensus         3 R~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~-----------------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~   64 (208)
                      |+.++++++.+++. ..+.++.++++|++|++                 ++.++++++.+.+|++|+||||||.....++
T Consensus        42 r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  121 (291)
T 1e7w_A           42 RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL  121 (291)
T ss_dssp             SCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCC
T ss_pred             CCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence            88999999999887 55678999999999999                 9999999999999999999999998877778


Q ss_pred             CCCC--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHH
Q 028508           65 EDLS--------------PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  130 (208)
Q Consensus        65 ~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  130 (208)
                      .+.+              .++|+.++++|+.+++.+++.++|.|++++..  .....++||++||..+..+.+++..|++
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~--~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  199 (291)
T 1e7w_A          122 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTM  199 (291)
T ss_dssp             CC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred             hhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--CCCCCcEEEEEechhhcCCCCCCchhHH
Confidence            8888              99999999999999999999999999865300  0001389999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCC-CCCCHHHHHHHHHHhcCCCC
Q 028508          131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       131 sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+++.+|+++++.|+. ++||+||+|+||+|+|++ .  .. ......+....|++ |+++|+|+|++++||+|+.+
T Consensus       200 sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~-~--~~-~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~  272 (291)
T 1e7w_A          200 AKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD-D--MP-PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA  272 (291)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG-G--SC-HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCccCCc-c--CC-HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcc
Confidence            99999999999999998 899999999999999997 3  22 33334455667888 99999999999999999764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.5e-35  Score=227.46  Aligned_cols=195  Identities=26%  Similarity=0.248  Sum_probs=176.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        58 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~  137 (267)
T 4iiu_A           58 HRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLD  137 (267)
T ss_dssp             SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhH
Confidence            57888899999999888888999999999999999999999999999999999999988888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+++.|+.+..       .++||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+|++|+||+
T Consensus       138 g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~  209 (267)
T 4iiu_A          138 SFYNVIQPCIMPMIGARQ-------GGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELA-KRKITVNCIAPGL  209 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTS-------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcCC-------CcEEEEEcchHhccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEEee
Confidence            999999999999874321       68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|++....   ...........|.+++++|+|+|++++||+++.+
T Consensus       210 v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~  252 (267)
T 4iiu_A          210 IDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIA  252 (267)
T ss_dssp             BCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             ecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            999876543   3444556677899999999999999999999865

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-36  Score=233.17  Aligned_cols=197  Identities=24%  Similarity=0.264  Sum_probs=166.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCC-eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...+.+ +.++++|++|+++++++++++.+++|++|+||||||.... .++.+.+.++|++++++
T Consensus        63 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~v  142 (281)
T 4dry_A           63 TGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAA  142 (281)
T ss_dssp             EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence            368999999999998776444 4889999999999999999999999999999999998755 67888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.|++.++++++|.|++++.      .+|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       143 N~~g~~~~~~~~~~~~~~~~~------~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~  215 (281)
T 4dry_A          143 NLTGAFLCTQHAFRMMKAQTP------RGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGR-MHDIACGQID  215 (281)
T ss_dssp             HTHHHHHHHHHHHHHHHHSSS------CCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HhHHHHHHHHHHHHHHHhcCC------CCcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEE
Confidence            999999999999999987631      158999999999999999999999999999999999999998 8999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+|++........   .......+..++++|+|+|++++||+|.+.
T Consensus       216 PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          216 IGNAATDMTARMSTGV---LQANGEVAAEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             EECBCC-------CEE---ECTTSCEEECCCBCHHHHHHHHHHHHHSCT
T ss_pred             ECcCcChhhhhhcchh---hhhhhcccccCCCCHHHHHHHHHHHhCCCc
Confidence            9999998764332110   112234567789999999999999999764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=7e-36  Score=225.24  Aligned_cols=182  Identities=19%  Similarity=0.234  Sum_probs=154.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++.   .++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        33 ~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  109 (235)
T 3l6e_A           33 MGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNL  109 (235)
T ss_dssp             EESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHh
Confidence            3688999998888883   2588999999999999999999999999999999999998778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.+++.++|.|+++         +++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       110 ~g~~~l~~~~~~~~~~~---------~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  179 (235)
T 3l6e_A          110 VSTILVAQQTVRLIGER---------GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELK-DSPLRLVNLYPS  179 (235)
T ss_dssp             HHHHHHHHHHHHHHTTT---------CEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHHHHHTT-TSSEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHc---------CCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhh-ccCCEEEEEeCC
Confidence            99999999999999875         46999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +|+|++......           .+..++.+|+|+|+.++||+++.
T Consensus       180 ~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~  214 (235)
T 3l6e_A          180 GIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEAR  214 (235)
T ss_dssp             EECCCC----------------------CBCHHHHHHHHHHHTCCC
T ss_pred             CccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCC
Confidence            999986543211           23347899999999999999854

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.8e-36  Score=229.84  Aligned_cols=193  Identities=25%  Similarity=0.338  Sum_probs=156.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++   +.++.++++|++|+++++++++++.+++|++|+||||||...+ .++.+.+.++|++++++|+
T Consensus        59 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~  135 (272)
T 4dyv_A           59 GRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNL  135 (272)
T ss_dssp             ESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHT
T ss_pred             ECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhcc
Confidence            68888888888877   4578899999999999999999999999999999999998765 6788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++++++|.|++++.+      +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       136 ~g~~~~~~~~~~~~~~~~~~------~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  208 (272)
T 4dyv_A          136 TGPFLCTQEAFRVMKAQEPR------GGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGR-VHDIACGQIDIG  208 (272)
T ss_dssp             HHHHHHHHHHHHHHHHSSSC------CEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCC------CcEEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEEEC
Confidence            99999999999999876411      48999999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|++.......   ........+.+++++|+|+|++++||+|++.
T Consensus       209 ~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~  252 (272)
T 4dyv_A          209 NADTPMAQKMKAG---VPQADLSIKVEPVMDVAHVASAVVYMASLPL  252 (272)
T ss_dssp             ECC---------------------------CHHHHHHHHHHHHHSCT
T ss_pred             cccChhhhhhccc---chhhhhcccccCCCCHHHHHHHHHHHhCCCC
Confidence            9999875543211   1122234567789999999999999999654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.2e-36  Score=231.02  Aligned_cols=199  Identities=23%  Similarity=0.286  Sum_probs=170.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+ ++.++.+|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|++++++|+
T Consensus        59 ~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~  137 (276)
T 2b4q_A           59 CARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNV  137 (276)
T ss_dssp             ECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            3688888998888887655 788899999999999999999999999999999999988777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchh-HHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~-~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+++.++|.|++++.+    ...++||++||..+..+.++.. .|+++|++++.|+++++.|+. ++||+||+|+|
T Consensus       138 ~g~~~l~~~~~~~m~~~~~~----~~~g~iV~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gI~vn~v~P  212 (276)
T 2b4q_A          138 TSVFSCIQQLLPLLRRSASA----ENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELV-GEHINVNVIAP  212 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHCCS----SSCEEEEEECCGGGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhccCC----CCCCEEEEECCHHHcCCCCCCccccHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            99999999999999876410    0028999999999998888888 999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhh--hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++......  .....+..  ..|++|+++|+|+|++++||+++++
T Consensus       213 G~v~T~~~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  260 (276)
T 2b4q_A          213 GRFPSRMTRHIAN--DPQALEADSASIPMGRWGRPEEMAALAISLAGTAG  260 (276)
T ss_dssp             CCCCSTTTHHHHH--CHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             ccCcCcchhhcch--hHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccc
Confidence            9999986432110  11122333  5688899999999999999999764

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=9.2e-36  Score=226.46  Aligned_cols=192  Identities=28%  Similarity=0.355  Sum_probs=158.2

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+. +++++   ++...+.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        38 ~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  114 (249)
T 2ew8_A           38 DLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINV  114 (249)
T ss_dssp             ESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             cCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            4666 55554   4445566889999999999999999999999999999999999988777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++++++|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||+|+||
T Consensus       115 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  185 (249)
T 2ew8_A          115 DSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG-KDGITVNAIAPS  185 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CeEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecC
Confidence            999999999999998875        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCcc-CCCCh-HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGV-SKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.. ..... ......+.  .|++++++|+|+|++++||+++++
T Consensus       186 ~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~  232 (249)
T 2ew8_A          186 LVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDA  232 (249)
T ss_dssp             CC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGG
T ss_pred             cCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCccc
Confidence            99998754 21101 01111111  578899999999999999999764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4.1e-36  Score=232.63  Aligned_cols=183  Identities=20%  Similarity=0.223  Sum_probs=164.3

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (208)
                      +++++.+++...+.++.++++|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.+++.+
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  131 (285)
T 3sc4_A           52 TIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAV  131 (285)
T ss_dssp             CHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence            57788888887788899999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC-cccC
Q 028508           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKD  164 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG-~v~t  164 (208)
                      +++++|.|++++        .|+||++||..+..+. ++...|+++|+|+.+|+++++.|+. ++||+||+|+|| .+.|
T Consensus       132 ~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~v~PG~~v~t  202 (285)
T 3sc4_A          132 SQSCIPHMKGRD--------NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVAT  202 (285)
T ss_dssp             HHHHGGGTTTSS--------SCEEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECSSCBCC
T ss_pred             HHHHHHHHHHcC--------CcEEEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeCCCcccc
Confidence            999999998765        6899999999988886 7889999999999999999999998 899999999999 6777


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++.         ........+++|+++|+|+|++++||+++.+
T Consensus       203 ~~~---------~~~~~~~~~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          203 AAV---------QNLLGGDEAMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             HHH---------HHHHTSCCCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             HHH---------HhhccccccccCCCCHHHHHHHHHHHhCCcc
Confidence            542         2223344567899999999999999999864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.2e-35  Score=228.50  Aligned_cols=195  Identities=24%  Similarity=0.307  Sum_probs=170.6

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +| +.+..+++.+++...+.++.++.+|++|.+++.++++++.+.++++|+||||||.....++.+.+.++|++.+++|+
T Consensus        60 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~  139 (271)
T 4iin_A           60 YRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNL  139 (271)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhcc
Confidence            45 56677888888888888899999999999999999999999999999999999998888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|.+++        .|+||++||..+..+.++...|+++|+|++.|+++++.|+. ++||+|++|+||
T Consensus       140 ~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG  210 (271)
T 4iin_A          140 TSAFIGCREALKVMSKSR--------FGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGA-LRNIRFNSVTPG  210 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEEechhhcCCCCCchHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeC
Confidence            999999999999998876        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.....  ......+....|.+++.+|+|+|++++||+++++
T Consensus       211 ~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~  255 (271)
T 4iin_A          211 FIETDMNANLK--DELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHS  255 (271)
T ss_dssp             SBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cccCCchhhhc--HHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCc
Confidence            99998765432  2334556677889999999999999999999865

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=4.5e-36  Score=231.51  Aligned_cols=197  Identities=25%  Similarity=0.329  Sum_probs=173.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|+.++++|+.
T Consensus        53 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  132 (277)
T 2rhc_B           53 ARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT  132 (277)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888999999999877778999999999999999999999999999999999999887777888999999999999999


Q ss_pred             HHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           82 GTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        82 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +++.++++++|.  |++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||+|+|
T Consensus       133 g~~~l~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  203 (277)
T 2rhc_B          133 GVFRVTKQVLKAGGMLERG--------TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RTGITVNAVCP  203 (277)
T ss_dssp             HHHHHHHHHHTTTCHHHHT--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEEEE
T ss_pred             HHHHHHHHHhChhhHhhcC--------CeEEEEECccccccCCCCCccHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEec
Confidence            999999999999  88765        68999999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCC---h------HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLA---P------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++......   .      ......+....|.+++++|+|+|++++||+++++
T Consensus       204 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~  260 (277)
T 2rhc_B          204 GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA  260 (277)
T ss_dssp             CSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999986432100   0      1222334455788999999999999999999864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-35  Score=223.91  Aligned_cols=189  Identities=28%  Similarity=0.370  Sum_probs=165.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +  +.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        36 ~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~  110 (245)
T 1uls_A           36 DIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLT  110 (245)
T ss_dssp             ESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            57777777666544   3  778999999999999999999999999999999999887777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|++++        .|+||++||.. ..+.+++..|+++|+++.+|+++++.|+. ++||+||+|+||+
T Consensus       111 g~~~l~~~~~~~m~~~~--------~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  180 (245)
T 1uls_A          111 GSFLVAKAASEAMREKN--------PGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLALELG-RWGIRVNTLAPGF  180 (245)
T ss_dssp             HHHHHHHHHHHHHTTTC--------CEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCc
Confidence            99999999999998765        68999999998 88888999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.... . ......+....|.+++++|+|+|++++||+++++
T Consensus       181 v~t~~~~~~-~-~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~  224 (245)
T 1uls_A          181 IETRMTAKV-P-EKVREKAIAATPLGRAGKPLEVAYAALFLLSDES  224 (245)
T ss_dssp             BCCTTTSSS-C-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcCcchhhc-C-HHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchh
Confidence            999875432 2 2233444556788899999999999999999764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.6e-35  Score=228.52  Aligned_cols=191  Identities=25%  Similarity=0.322  Sum_probs=162.9

Q ss_pred             cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      +.++++++.+++...+.++.++++|++|+++++++++++.+++|++|+||||||......    +.++|++++++|+.++
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~  133 (278)
T 3sx2_A           58 TPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGV  133 (278)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHH
T ss_pred             chHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHH
Confidence            478888888888888889999999999999999999999999999999999999865432    5899999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC----CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.++++++|.|++++.       .|+||++||..+..+.    ++...|+++|+|+.+|+++++.|+. ++||+||+|+|
T Consensus       134 ~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~P  205 (278)
T 3sx2_A          134 YHTIKVAIPTLVKQGT-------GGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLA-GQMIRVNSIHP  205 (278)
T ss_dssp             HHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHhCCC-------CcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHh-ccCcEEEEEec
Confidence            9999999999987642       5899999999998877    7888999999999999999999999 89999999999


Q ss_pred             CcccCCCccCCCChHHHHH---------hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRS---------KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++............         ......| +++.+|+|+|++++||+|+++
T Consensus       206 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~  261 (278)
T 3sx2_A          206 SGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQA  261 (278)
T ss_dssp             SCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGG
T ss_pred             CCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCccc
Confidence            9999997654221111111         1122344 678899999999999999865

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.2e-35  Score=227.22  Aligned_cols=196  Identities=21%  Similarity=0.229  Sum_probs=167.3

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++...  +.++.++.+|++|+++++++++++.+++| +|+||||||.....++.+.+.++|++++++|
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N  116 (260)
T 2z1n_A           38 SRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLL  116 (260)
T ss_dssp             ESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            68888898888888754  33788999999999999999999999998 9999999998777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+++..|+++++.|+. ++||+||+|+|
T Consensus       117 ~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~P  187 (260)
T 2z1n_A          117 ARSAVWVGRRAAEQMVEKG--------WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELA-PHGVTVNAVLP  187 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEE
Confidence            9999999999999998875        68999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccC---------CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++...         ...+......+....|++|+++|+|+|++++||+++.+
T Consensus       188 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~  244 (260)
T 2z1n_A          188 SLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKA  244 (260)
T ss_dssp             CHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             CCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            9999997651         11111112333445688899999999999999999764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.5e-35  Score=227.34  Aligned_cols=195  Identities=19%  Similarity=0.160  Sum_probs=170.3

Q ss_pred             CCcHHHHHHHHHHHHhcCC-CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~   76 (208)
                      +|+.+..+.+.+.....+. ++.++.+|++|+++++++++++.+++|++|++|||||...    ..++.+.+.++|+.++
T Consensus        40 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  119 (266)
T 3oig_A           40 YAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAH  119 (266)
T ss_dssp             ESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHH
T ss_pred             cCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHH
Confidence            4555444444444444443 7899999999999999999999999999999999999876    4667788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++.+.|.|++          +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++
T Consensus       120 ~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~  188 (266)
T 3oig_A          120 NISSYSLTAVVKAARPMMTE----------GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLG-KENIRVNS  188 (266)
T ss_dssp             HHHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEE
T ss_pred             HHhHHHHHHHHHHHHhhcCC----------CceEEEEecccccccCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEE
Confidence            99999999999999998864          58999999999999999999999999999999999999998 89999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+|+|++.............+....|.+++.+|+|+|++++||+++++
T Consensus       189 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~  239 (266)
T 3oig_A          189 ISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMS  239 (266)
T ss_dssp             EEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             EecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCch
Confidence            999999998776655555566677788899999999999999999999764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=4.5e-36  Score=230.38  Aligned_cols=194  Identities=21%  Similarity=0.197  Sum_probs=166.0

Q ss_pred             CCCcHHHHHHHHHHHHhcC--CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...+  ..+..+.+|++++++++++++    ++|++|++|||||.....++.+.+.++|++++++
T Consensus        40 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v  115 (267)
T 3t4x_A           40 NGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEV  115 (267)
T ss_dssp             EESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence            3688999999999998763  457789999999999877654    5789999999999988888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.+++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       116 N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~  186 (267)
T 3t4x_A          116 NIMSGVRLTRSYLKKMIERK--------EGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTT-GTNVTVNTIM  186 (267)
T ss_dssp             HTHHHHHHHHHHHHHHHHTT--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEE
T ss_pred             HhHHHHHHHHHHHHHHHhCC--------CCEEEEEcchhhccCCCcchHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEe
Confidence            99999999999999999876        68999999999999999999999999999999999999998 8999999999


Q ss_pred             cCcccCCCccCC---------CChHHHHHh----hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSK---------LAPEEIRSK----ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~---------~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++....         ...++....    .....|++|+++|+|+|++++||+|+.+
T Consensus       187 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~  248 (267)
T 3t4x_A          187 PGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLS  248 (267)
T ss_dssp             ECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGG
T ss_pred             CCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccc
Confidence            999999853311         111222222    2233568999999999999999999865

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.4e-35  Score=224.56  Aligned_cols=187  Identities=20%  Similarity=0.249  Sum_probs=165.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCC-CeeEEEcCC--CCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGI-PAIGLEGDV--RKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVI   76 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~-~~~~~~~D~--~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~   76 (208)
                      ++|+.++++++.+++...+. ++.++.+|+  +|.++++++++++.+.+|++|+||||||... ..++.+.+.++|++++
T Consensus        42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~  121 (252)
T 3f1l_A           42 LGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVM  121 (252)
T ss_dssp             EESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHH
Confidence            36899999999999877643 788999999  9999999999999999999999999999864 3688889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++ |+||+
T Consensus       122 ~~N~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~-irvn~  191 (252)
T 3f1l_A          122 QVNVNATFMLTQALLPLLLKSD--------AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQ-QR-LRVNC  191 (252)
T ss_dssp             HHHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHHCC--------CCEEEEECChhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-cEEEE
Confidence            9999999999999999998876        78999999999999999999999999999999999999998 76 99999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+++|++....          ....+..++.+|+|+|++++||+|+++
T Consensus       192 v~PG~v~t~~~~~~----------~~~~~~~~~~~p~dva~~~~~L~s~~~  232 (252)
T 3f1l_A          192 INPGGTRTAMRASA----------FPTEDPQKLKTPADIMPLYLWLMGDDS  232 (252)
T ss_dssp             EECCSBSSHHHHHH----------CTTCCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred             EecCcccCchhhhh----------CCccchhccCCHHHHHHHHHHHcCccc
Confidence            99999998753221          111223457899999999999999875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.8e-35  Score=225.18  Aligned_cols=199  Identities=27%  Similarity=0.343  Sum_probs=159.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++   +.++.++.+|++|.++++++++++.+++|++|++|||||... ..++.+.+.++|++++++|
T Consensus        39 ~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N  115 (261)
T 3n74_A           39 VDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVN  115 (261)
T ss_dssp             EESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHH
T ss_pred             EcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHh
Confidence            368888888888876   567899999999999999999999999999999999999876 4667778999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++.++|.|++++.+    ...++||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       116 ~~g~~~l~~~~~~~~~~~~~~----~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~P  190 (261)
T 3n74_A          116 VRGVYLMTSKLIPHFKENGAK----GQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA-PAKIRVVALNP  190 (261)
T ss_dssp             THHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCCC----CCCeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            999999999999999875311    1147899999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCC--ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++.....  ........+....|.+++.+|+|+|++++||+|+++
T Consensus       191 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  240 (261)
T 3n74_A          191 VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQA  240 (261)
T ss_dssp             C-------------------------CTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             CcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcc
Confidence            999999766443  223344556677899999999999999999999765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=3.6e-35  Score=224.76  Aligned_cols=188  Identities=22%  Similarity=0.235  Sum_probs=161.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++...+.++.++.+|++|.+++.++++++.+.+|++|+||||||. ....++.+.+.++|+.++++|
T Consensus        59 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN  138 (262)
T 3rkr_A           59 TARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVN  138 (262)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHH
Confidence            3689999999999998888889999999999999999999999999999999999998 445677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.|++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       139 ~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~~v~P  209 (262)
T 3rkr_A          139 LKAPYLLLRAFAPAMIAAK--------RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR-QHQVRVSLVAP  209 (262)
T ss_dssp             THHHHHHHHHHHHHHHHTT--------CCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CceEEEEechhhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            9999999999999998876        78999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++.....          ...+..+..+|+|+|++++||+++.+
T Consensus       210 G~v~t~~~~~~~----------~~~~~~~~~~p~dvA~~v~~l~s~~~  247 (262)
T 3rkr_A          210 GSVRTEFGVGLS----------AKKSALGAIEPDDIADVVALLATQAD  247 (262)
T ss_dssp             CCC--------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred             CCCcCCcccccc----------cccccccCCCHHHHHHHHHHHhcCcc
Confidence            999998653321          22345678899999999999999865

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.6e-36  Score=229.09  Aligned_cols=196  Identities=20%  Similarity=0.248  Sum_probs=152.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC----CCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE----DLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~   77 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||......+.    +.+.++|+++++
T Consensus        38 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  114 (257)
T 3tpc_A           38 DLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA  114 (257)
T ss_dssp             ESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred             eCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence            57777777766665   45788999999999999999999999999999999999987654433    678899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.+++++.|.|+++...  .....|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+||+|
T Consensus       115 vN~~g~~~l~~~~~~~m~~~~~~--~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v  191 (257)
T 3tpc_A          115 VNLIGTFNMIRLAAEVMSQGEPD--ADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELA-RFGIRVVTI  191 (257)
T ss_dssp             HHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HHhHHHHHHHHHHHHHHHhcccc--CCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEE
Confidence            99999999999999999875210  001268999999999999999999999999999999999999998 899999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcC-CCCCCHHHHHHHHHHhcCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~  205 (208)
                      +||+|+|++.....  ......+....|+ +|+++|+|+|++++||+++
T Consensus       192 ~PG~v~t~~~~~~~--~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~  238 (257)
T 3tpc_A          192 APGIFDTPMMAGMP--QDVQDALAASVPFPPRLGRAEEYAALVKHICEN  238 (257)
T ss_dssp             EECCBSCC----------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             EeCCCCChhhccCC--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc
Confidence            99999998765432  2233445566777 8999999999999999986

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=5.5e-36  Score=230.71  Aligned_cols=181  Identities=23%  Similarity=0.273  Sum_probs=158.5

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (208)
                      .++++.+++...+.++.++++|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.+++.+
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  128 (274)
T 3e03_A           49 TIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVC  128 (274)
T ss_dssp             CHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHH
Confidence            36777788877788899999999999999999999999999999999999998888888899999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC-ccc
Q 028508           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIK  163 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG-~v~  163 (208)
                      +++++|.|++++        .|+||++||..+..+  .++...|+++|+|+.+|+++++.|+. ++||+||+|+|| +++
T Consensus       129 ~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~v~  199 (274)
T 3e03_A          129 AQACLPHLLQAP--------NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIA  199 (274)
T ss_dssp             HHHHHHHHTTSS--------SCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECSBCBC
T ss_pred             HHHHHHHHHhcC--------CceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCEEEEEEECCcccc
Confidence            999999998876        789999999999888  67889999999999999999999999 899999999999 688


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |++....           ...+..+..+|+|+|++++||+|+.+
T Consensus       200 T~~~~~~-----------~~~~~~~~~~pedvA~~v~~l~s~~~  232 (274)
T 3e03_A          200 TDAINML-----------PGVDAAACRRPEIMADAAHAVLTREA  232 (274)
T ss_dssp             C------------------CCCGGGSBCTHHHHHHHHHHHTSCC
T ss_pred             cchhhhc-----------ccccccccCCHHHHHHHHHHHhCccc
Confidence            8765211           11233457899999999999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-35  Score=230.46  Aligned_cols=195  Identities=22%  Similarity=0.283  Sum_probs=170.0

Q ss_pred             CCcHHHHHHHHHHHHhcCC---CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC--CCCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~   76 (208)
                      +|+.++++++.+++...+.   ++.++.+|++|+++++++++++.+++|++|+||||||.....+  +.+.+.++|++++
T Consensus        57 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~  136 (297)
T 1xhl_A           57 GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTF  136 (297)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHH
Confidence            6889999999999887665   7889999999999999999999999999999999999876655  7788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      ++|+.+++.+++++.|.|+++         +|+||++||..+..+. ++...|+++|+++..|+++++.|+. ++||+||
T Consensus       137 ~vN~~g~~~l~~~~~~~~~~~---------~g~IV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~-~~gI~v~  206 (297)
T 1xhl_A          137 KLNFQAVIEMTQKTKEHLIKT---------KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVN  206 (297)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHT---------TCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEE
T ss_pred             hHhhHHHHHHHHHHHHHHHhc---------CCEEEEEcCchhccCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEE
Confidence            999999999999999999875         4889999999998888 8899999999999999999999998 8899999


Q ss_pred             EeecCcccCCCccCCC-Ch------HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          156 GIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +|+||+|+|++..... ..      ......+....|.+++++|+|+|++++||+++.
T Consensus       207 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~  264 (297)
T 1xhl_A          207 SVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRN  264 (297)
T ss_dssp             EEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             EEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            9999999998754321 11      112223334568889999999999999999875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=5.9e-35  Score=224.08  Aligned_cols=187  Identities=27%  Similarity=0.333  Sum_probs=166.9

Q ss_pred             HHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (208)
Q Consensus         9 ~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (208)
                      ++..+++.+. +.++.++++|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+.++++|+.+++.++
T Consensus        61 ~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  140 (267)
T 3gdg_A           61 EENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCA  140 (267)
T ss_dssp             HHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHH
Confidence            6666666543 678999999999999999999999999999999999999988888889999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                      +.++|.|++++        .|+||++||..+..+.  ++...|+++|+|+++|+++++.|+. ++ |+||+|+||+++|+
T Consensus       141 ~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~v~~v~PG~v~t~  210 (267)
T 3gdg_A          141 KAVGHHFKERG--------TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYIDTG  210 (267)
T ss_dssp             HHHHHHHHHHT--------CCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEEECCEECS
T ss_pred             HHHHHHHHHcC--------CceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhc-cC-cEEEEEECCccccc
Confidence            99999999876        6899999999988765  5789999999999999999999998 76 99999999999998


Q ss_pred             CccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +....  .......+....|.+|+++|+|+|++++||+|+.+
T Consensus       211 ~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~  250 (267)
T 3gdg_A          211 LSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDAS  250 (267)
T ss_dssp             CGGGS--CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTC
T ss_pred             hhhhC--CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCcc
Confidence            76533  33445566778899999999999999999999865

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=4.6e-35  Score=225.74  Aligned_cols=198  Identities=21%  Similarity=0.218  Sum_probs=165.7

Q ss_pred             CC-cHHHHHHHHHHHHhc-CCCeeEEEcCCCCH----HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCH------
Q 028508            2 GR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKR----EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP------   69 (208)
Q Consensus         2 ~R-~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~----~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~------   69 (208)
                      +| +.++++++.+++... +.++.++.+|++|.    ++++++++++.+.+|++|+||||||.....++.+.+.      
T Consensus        42 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~  121 (276)
T 1mxh_A           42 YRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAAD  121 (276)
T ss_dssp             ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC---------
T ss_pred             eCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCccccccc
Confidence            57 888899999988776 66889999999999    9999999999999999999999999887777778888      


Q ss_pred             -----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHH
Q 028508           70 -----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL  144 (208)
Q Consensus        70 -----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~  144 (208)
                           ++|+.++++|+.+++.++++++|.|. ++.  ......++||++||..+..+.+++..|+++|+++++|+++++.
T Consensus       122 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~--~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~  198 (276)
T 1mxh_A          122 AKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGG--AWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAAL  198 (276)
T ss_dssp             --CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCC--CCCCCCcEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999987 430  0001128999999999999999999999999999999999999


Q ss_pred             HhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCC-CCCHHHHHHHHHHhcCCCC
Q 028508          145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       145 e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dva~~~~~L~s~~a  207 (208)
                      |+. ++||+||+|+||+++|+ .  ... ......+....|++| +++|+|+|++++||+++.+
T Consensus       199 e~~-~~gi~v~~v~PG~v~t~-~--~~~-~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~  257 (276)
T 1mxh_A          199 ELA-PRHIRVNAVAPGLSLLP-P--AMP-QETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDA  257 (276)
T ss_dssp             HHG-GGTEEEEEEEESSBSCC-S--SSC-HHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGG
T ss_pred             HHh-hcCeEEEEEecCcccCC-c--cCC-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCccc
Confidence            998 88999999999999998 2  222 233344445678888 9999999999999999754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=3e-35  Score=227.27  Aligned_cols=194  Identities=19%  Similarity=0.166  Sum_probs=169.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~   76 (208)
                      +|+.  .++..+++.+...++.++.+|++|.++++++++++.++++++|+||||||+...    .++.+ .+.++|+.++
T Consensus        59 ~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~  136 (280)
T 3nrc_A           59 YVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAH  136 (280)
T ss_dssp             ECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHH
T ss_pred             eCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHH
Confidence            3444  344555565555568899999999999999999999999999999999998764    34444 8899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++++.|.|.++         .++||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|++
T Consensus       137 ~~N~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gi~v~~  206 (280)
T 3nrc_A          137 DISAYSFAALAKEGRSMMKNR---------NASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALG-EDGIKVNA  206 (280)
T ss_dssp             HHHTHHHHHHHHHHHHHHTTT---------TCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhcC---------CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHHH-HcCcEEEE
Confidence            999999999999999999765         58999999999999999999999999999999999999998 88999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+|+|++..................|.+++.+|+|+|++++||+++.+
T Consensus       207 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~  257 (280)
T 3nrc_A          207 VSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMA  257 (280)
T ss_dssp             EEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGG
T ss_pred             EeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            999999999876655555666777788899999999999999999999764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-35  Score=228.03  Aligned_cols=195  Identities=23%  Similarity=0.309  Sum_probs=169.3

Q ss_pred             CCcHHHHHHHHHHHHhcCC---CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC----CCCCCHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFRT   74 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~----~~~~~~~~~~~   74 (208)
                      +|+.++++++.+++...+.   ++.++.+|++|+++++++++++.+++|++|+||||||.....+    +.+.+.++|++
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~  116 (280)
T 1xkq_A           37 GRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHK  116 (280)
T ss_dssp             ESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHH
T ss_pred             eCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHH
Confidence            6888999999888877665   7889999999999999999999999999999999999876655    67789999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-CchhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      ++++|+.+++.+++.+.|.|+++         +++||++||..+..+. ++...|+++|+++++|+++++.|+. ++||+
T Consensus       117 ~~~~N~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~  186 (280)
T 1xkq_A          117 TLKLNLQAVIEMTKKVKPHLVAS---------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIR  186 (280)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCE
T ss_pred             HHHHhhHHHHHHHHHHHHHhhcC---------CCcEEEecCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhc-cCCeE
Confidence            99999999999999999999865         4789999999998887 8899999999999999999999998 89999


Q ss_pred             EEEeecCcccCCCccCCC-Ch------HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          154 VNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ||+|+||+++|++..... ..      ......+....|.+++++|+|+|++++||+++.
T Consensus       187 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~  246 (280)
T 1xkq_A          187 VNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN  246 (280)
T ss_dssp             EEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             EEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcc
Confidence            999999999998754321 11      112223334468889999999999999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-35  Score=228.52  Aligned_cols=194  Identities=21%  Similarity=0.158  Sum_probs=162.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~   76 (208)
                      +|+.. ..+..+++.+...++.++.+|++|+++++++++++.+++|++|+||||||+...    .++.+ .+.++|+.++
T Consensus        47 ~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  125 (271)
T 3ek2_A           47 YVGDR-FKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAH  125 (271)
T ss_dssp             ESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHH
T ss_pred             ecchh-hHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHH
Confidence            35533 333344444444468899999999999999999999999999999999998764    55666 8999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++.+.|.|++          .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+|++
T Consensus       126 ~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~  194 (271)
T 3ek2_A          126 DISAYSFPALAKAALPMLSD----------DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLG-AKGVRVNA  194 (271)
T ss_dssp             HHHTTHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEE
T ss_pred             hhhHHHHHHHHHHHHHHhcc----------CceEEEEeccccccCCCCccchhHHHHHHHHHHHHHHHHHH-hcCcEEEE
Confidence            99999999999999998864          58899999999999999999999999999999999999998 89999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+|+|++.............+....|++++++|+|+|++++||+++.+
T Consensus       195 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~  245 (271)
T 3ek2_A          195 ISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLA  245 (271)
T ss_dssp             EEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             EecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence            999999998765543334555667778899999999999999999999864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.4e-35  Score=225.99  Aligned_cols=195  Identities=28%  Similarity=0.314  Sum_probs=176.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhC------CccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG------KLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g------~id~lv~~ag~~~~~~~~~~~~~~~~~~   75 (208)
                      +|+.++++++.+++...+.++..+.+|++|.++++++++.+.+.++      ++|++|||||......+.+.+.++|+++
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~  118 (255)
T 3icc_A           39 GNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM  118 (255)
T ss_dssp             SSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHH
T ss_pred             CCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHH
Confidence            5788889999999988888899999999999999999999988764      4999999999987778888999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.+++.++|.|.+          .++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|+
T Consensus       119 ~~~N~~g~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~  187 (255)
T 3icc_A          119 VSVNAKAPFFIIQQALSRLRD----------NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVN  187 (255)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEE----------EEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEE
T ss_pred             HhhhchHHHHHHHHHHHhhCC----------CCEEEEeCChhhccCCCCcchhHHhHHHHHHHHHHHHHHHH-hcCeEEE
Confidence            999999999999999998843          58899999999999999999999999999999999999998 8899999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+||+++|++..................|++|+++|+|+|++++||+|+.+
T Consensus       188 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  239 (255)
T 3icc_A          188 AILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDS  239 (255)
T ss_dssp             EEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             EEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCccc
Confidence            9999999999877665555555666677888999999999999999999865

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.9e-35  Score=225.12  Aligned_cols=194  Identities=27%  Similarity=0.389  Sum_probs=141.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC---CCCCCCCCCHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIE   77 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~---~~~~~~~~~~~~~~~~~~   77 (208)
                      ++|+.++++++.+++...+.++.++.+|++|+++++++++++.+.+|++|+||||||..   ...++.+.+.++|+++++
T Consensus        39 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  118 (253)
T 3qiv_A           39 ADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS  118 (253)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred             EcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence            36899999999999988888899999999999999999999999999999999999984   345677889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.+++.++|.|++++        .++||++||..++   ++...|+++|+|+++|+++++.|+. ++||+|+.|
T Consensus       119 ~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~---~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v  186 (253)
T 3qiv_A          119 VNLDGALWCTRAVYKKMTKRG--------GGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELG-GRNIRINAI  186 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT--------CEEEEEECC--------------CCHHHHHHHHHHHHHHTT-TTTEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHhcC--------CCEEEEECCcccc---CCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEE
Confidence            999999999999999999876        7999999999876   4567799999999999999999998 889999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+++|++..... +.+.........|.+++++|+|+|++++||+++.+
T Consensus       187 ~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  235 (253)
T 3qiv_A          187 APGPIDTEANRTTT-PKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEA  235 (253)
T ss_dssp             EC--------------------------------CCHHHHHHHHHHSGGG
T ss_pred             EecCCcccchhhcC-cHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccc
Confidence            99999998755432 23444556677888999999999999999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.7e-35  Score=224.57  Aligned_cols=195  Identities=21%  Similarity=0.254  Sum_probs=166.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+  ++..+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        35 ~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  112 (255)
T 2q2v_A           35 GFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS  112 (255)
T ss_dssp             CSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            45554  4566667666677889999999999999999999999999999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .++||++||..+..+.++...|+++|+++.+|+++++.|+. ++||+||.|+||+
T Consensus       113 ~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (255)
T 2q2v_A          113 AVFHGTRLALPGMRARN--------WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETA-TSNVTCNAICPGW  183 (255)
T ss_dssp             HHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHTT-TSSEEEEEEEESS
T ss_pred             HHHHHHHHHHHHHHHcC--------CcEEEEEcCchhccCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCC
Confidence            99999999999998875        68999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCC-hHHH---H----Hhh-hhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLA-PEEI---R----SKA-TDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++...... ....   .    ..+ ....|.+++++|+|+|++++||+++++
T Consensus       184 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  238 (255)
T 2q2v_A          184 VLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG  238 (255)
T ss_dssp             BCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGG
T ss_pred             CcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            99986432110 0111   0    222 345678899999999999999999764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=8e-36  Score=231.61  Aligned_cols=194  Identities=28%  Similarity=0.381  Sum_probs=168.9

Q ss_pred             CCcHH-HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.+ ..+.+.+.+...+.++.++.+|++|+++++++++++.+++|++|+||||||.... .++.+.+.++|++++++|
T Consensus        78 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN  157 (291)
T 3ijr_A           78 YLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRIN  157 (291)
T ss_dssp             ESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHH
T ss_pred             eCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHH
Confidence            45554 4556666666677889999999999999999999999999999999999998754 567788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.|++.++++++|.|++          .++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       158 ~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~P  226 (291)
T 3ijr_A          158 IFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLV-QKGIRVNGVAP  226 (291)
T ss_dssp             THHHHHHHHHHHTTCCT----------TCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhh----------CCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEee
Confidence            99999999999998854          57899999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++...... ......+....|++|+++|+|+|++++||+|+++
T Consensus       227 G~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~  273 (291)
T 3ijr_A          227 GPIWTPLIPSSFD-EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDS  273 (291)
T ss_dssp             CSBCSTHHHHHSC-HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGG
T ss_pred             CCCcCCcccccCC-HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            9999987543332 2334456677899999999999999999999875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-34  Score=227.47  Aligned_cols=198  Identities=19%  Similarity=0.260  Sum_probs=169.8

Q ss_pred             CcHHHHHHHHHHHH-hcCCCeeEEEcCCCCHH-----------------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCC
Q 028508            3 RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE-----------------DAVRVVESTINHFGKLDILVNAAAGNFLVPA   64 (208)
Q Consensus         3 R~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~-----------------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~   64 (208)
                      |+.++++++.+++. ..+.++.++.+|++|++                 +++++++++.+.+|++|+||||||+....++
T Consensus        79 r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~  158 (328)
T 2qhx_A           79 RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL  158 (328)
T ss_dssp             SCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCS
T ss_pred             CCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence            88899999999887 45678999999999999                 9999999999999999999999998877777


Q ss_pred             CCCC--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHH
Q 028508           65 EDLS--------------PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  130 (208)
Q Consensus        65 ~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  130 (208)
                      .+.+              .++|+.++++|+.+++.+++.++|.|.+++..  .....++||++||..+..+.+++..|++
T Consensus       159 ~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~--~~~~~g~IV~isS~~~~~~~~~~~~Y~a  236 (328)
T 2qhx_A          159 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTM  236 (328)
T ss_dssp             CC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred             hhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--CCCCCcEEEEECchhhccCCCCcHHHHH
Confidence            7888              89999999999999999999999999875310  0011379999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCC-CCCCHHHHHHHHHHhcCCCC
Q 028508          131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       131 sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|+..|+++++.|+. ++||+||+|+||+|+|++ . .. + .....+....|++ ++++|+|+|++++||+++.+
T Consensus       237 sKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~-~-~~-~-~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~  309 (328)
T 2qhx_A          237 AKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD-D-MP-P-AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKA  309 (328)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCC-C-SC-H-HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCCc-c-cc-H-HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999998 889999999999999997 2 22 2 3334445567888 99999999999999998754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=8.6e-36  Score=227.26  Aligned_cols=192  Identities=29%  Similarity=0.266  Sum_probs=165.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+.++++|+.
T Consensus        36 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  112 (254)
T 1hdc_A           36 DVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT  112 (254)
T ss_dssp             ESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            57888887776665   446888999999999999999999999999999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+|++|+||+
T Consensus       113 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (254)
T 1hdc_A          113 GVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGM  183 (254)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CCEEEEECchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccc
Confidence            99999999999998875        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCC-CHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~~a  207 (208)
                      ++|++......  ..........|.++++ +|+|+|++++||+++++
T Consensus       184 v~t~~~~~~~~--~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~  228 (254)
T 1hdc_A          184 TYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS  228 (254)
T ss_dssp             BCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred             CcCccccccch--hHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchh
Confidence            99986432110  0111222345778888 99999999999999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=6.3e-35  Score=225.52  Aligned_cols=192  Identities=22%  Similarity=0.264  Sum_probs=162.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC-CC----CCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PA----EDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~-~~----~~~~~~~~~~~~   76 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+.... .+    .+.+.++|++++
T Consensus        36 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~  112 (281)
T 3zv4_A           36 DKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIF  112 (281)
T ss_dssp             ESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHH
Confidence            68888887776654   56789999999999999999999999999999999999986532 22    244567899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.++++++|.|+++         +|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++ ||||+
T Consensus       113 ~vN~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~-Irvn~  181 (281)
T 3zv4_A          113 HVNVKGYIHAVKACLPALVSS---------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA-PH-VRVNG  181 (281)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHhc---------CCeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-CEEEE
Confidence            999999999999999999875         58999999999999999999999999999999999999998 76 99999


Q ss_pred             eecCcccCCCccCCCC--------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC-CCC
Q 028508          157 IAPGPIKDTAGVSKLA--------PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s-~~a  207 (208)
                      |+||+|+|++......        .......+....|++|+++|+|+|++++||+| +.+
T Consensus       182 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~  241 (281)
T 3zv4_A          182 VAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDS  241 (281)
T ss_dssp             EEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTS
T ss_pred             EECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhccccc
Confidence            9999999997543211        11233456677899999999999999999999 543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3e-35  Score=226.69  Aligned_cols=194  Identities=23%  Similarity=0.178  Sum_probs=164.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~   77 (208)
                      +|+.+ .++..+++.....++.++.+|++|+++++++++++.+.+|++|+||||||....    .++.+.+.++|+.+++
T Consensus        39 ~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  117 (275)
T 2pd4_A           39 YLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAME  117 (275)
T ss_dssp             ESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred             eCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHH
Confidence            46654 444555555433357889999999999999999999999999999999998764    5677889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.++++++|.|++          +|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||+|
T Consensus       118 ~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v  186 (275)
T 2pd4_A          118 ISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNAL  186 (275)
T ss_dssp             HHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEE
T ss_pred             HHhHHHHHHHHHHHHHhcc----------CCEEEEEecchhcCCCCCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEE
Confidence            9999999999999998863          48899999999999999999999999999999999999998 899999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++.............+....|++++++|+|+|++++||+++.+
T Consensus       187 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~  236 (275)
T 2pd4_A          187 SAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLS  236 (275)
T ss_dssp             EECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             eeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccc
Confidence            99999999765433223334445566788999999999999999998754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.6e-35  Score=224.11  Aligned_cols=199  Identities=26%  Similarity=0.338  Sum_probs=164.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++.+|++|.++++++++++.+++|++|+||||||.... .++.+.+.++|++++++|+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~  137 (272)
T 4e3z_A           58 AANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNV  137 (272)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             CCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhh
Confidence            678888999999998888889999999999999999999999999999999999998765 6778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCC-chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+++.++|.|.+...+     ..|+||++||..+..+.+ .+..|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       138 ~g~~~l~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~P  211 (272)
T 4e3z_A          138 TGSILCAAEAVRRMSRLYSG-----QGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVA-AEGIRVNAVRP  211 (272)
T ss_dssp             HHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhccC-----CCCEEEEEcchHhccCCCCCcchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEec
Confidence            99999999999999764211     168999999999988766 678899999999999999999998 88999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++...... ...........|.+++++|+|+|++++||+++.+
T Consensus       212 G~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~  258 (272)
T 4e3z_A          212 GIIETDLHASGGL-PDRAREMAPSVPMQRAGMPEEVADAILYLLSPSA  258 (272)
T ss_dssp             CSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCcCCcccccCC-hHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcc
Confidence            9999987654222 2233445566788899999999999999998764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-35  Score=223.05  Aligned_cols=191  Identities=29%  Similarity=0.379  Sum_probs=162.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++ +++.+++.    + .++++|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        37 ~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  110 (256)
T 2d1y_A           37 DLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT  110 (256)
T ss_dssp             ESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH
T ss_pred             eCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            566666 66666553    4 77899999999999999999999999999999999987778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++++++|.|++++        .|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||+|+||+
T Consensus       111 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  181 (256)
T 2d1y_A          111 APMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGA  181 (256)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCC
Confidence            99999999999998865        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCC----CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....    .........+....|.+++++|+|+|++++||+++.+
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~  231 (256)
T 2d1y_A          182 IATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKA  231 (256)
T ss_dssp             BCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            999864321    1011122234455688899999999999999999764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-35  Score=225.07  Aligned_cols=195  Identities=26%  Similarity=0.301  Sum_probs=158.3

Q ss_pred             CCcHHHHHHHHHHHH---hcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC----CHHHHHH
Q 028508            2 GRRKTVLRSAVAALH---SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL----SPNGFRT   74 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~----~~~~~~~   74 (208)
                      +|+.++++++.+++.   ..+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.    +.++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~  116 (278)
T 1spx_A           37 GRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDA  116 (278)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHH
Confidence            688889998888883   334568889999999999999999999999999999999998776667777    9999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-cccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      ++++|+.+++.+++.+.|.|+++         +|+||++||..+ ..+.++...|+++|+++++|+++++.|+. ++||+
T Consensus       117 ~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~  186 (278)
T 1spx_A          117 TLNLNLRSVIALTKKAVPHLSST---------KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIR  186 (278)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCE
T ss_pred             HHHHHhHHHHHHHHHHHHHHhhc---------CCeEEEEecccccccCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCcE
Confidence            99999999999999999999875         488999999998 88889999999999999999999999998 88999


Q ss_pred             EEEeecCcccCCCccCCCC-hHHH------HHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          154 VNGIAPGPIKDTAGVSKLA-PEEI------RSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+.|+||+++|++...... ....      ........|.+++++|+|+|++++||++++
T Consensus       187 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~  246 (278)
T 1spx_A          187 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK  246 (278)
T ss_dssp             EEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             EEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCcc
Confidence            9999999999987543211 1111      233445568889999999999999999864

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.1e-34  Score=224.51  Aligned_cols=195  Identities=23%  Similarity=0.190  Sum_probs=163.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~   77 (208)
                      +|+.+ .++..+++.....++.++.+|++|+++++++++++.+++|++|+||||||....    .++.+.+.++|+.+++
T Consensus        54 ~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  132 (285)
T 2p91_A           54 YATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMD  132 (285)
T ss_dssp             ESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred             eCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence            46654 444555555433347889999999999999999999999999999999998754    5667889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.|++.+++++.|.|.++         +|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||+|
T Consensus       133 ~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v  202 (285)
T 2p91_A          133 ISVYSLIALTRELLPLMEGR---------NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIA-KHGHRINAI  202 (285)
T ss_dssp             HHTHHHHHHHHHHGGGGTTS---------CCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEE
T ss_pred             HhhHHHHHHHHHHHHHHHHc---------CCEEEEEccchhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEE
Confidence            99999999999999998653         58999999999999999999999999999999999999998 899999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++.............+....|++++++|+|+|++++||+++.+
T Consensus       203 ~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~  252 (285)
T 2p91_A          203 SAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWA  252 (285)
T ss_dssp             EECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             EeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            99999998754332223333445556788999999999999999998754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-34  Score=222.01  Aligned_cols=194  Identities=24%  Similarity=0.294  Sum_probs=161.3

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCC--CCCCCCCCCCCHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag--~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      |+.+..+.+.+.+...+.++.++.+|++|++++.++++++.+++|++|+||||||  .....++.+.+.++|++++++|+
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~  119 (264)
T 3i4f_A           40 SDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNL  119 (264)
T ss_dssp             SCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHT
T ss_pred             CChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhcc
Confidence            3455566666666666678999999999999999999999999999999999999  44556778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc-cc-cccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~-~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .+++.+++.++|.|++++        .++||++||. .+ ..+.++...|+++|+|+++|+++++.|+. ++||+|++|+
T Consensus       120 ~g~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~  190 (264)
T 3i4f_A          120 TAVFHLLKLVVPVMRKQN--------FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEA-EYGITANMVC  190 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEc
Confidence            999999999999998876        6899999998 44 55677889999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++....  ............|++|+++|+|+|++++||+++.+
T Consensus       191 PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~  237 (264)
T 3i4f_A          191 PGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDS  237 (264)
T ss_dssp             ECCCCGGGGSCC--HHHHHHC--------CCCCHHHHHHHHHHHHSGGG
T ss_pred             cCCccCccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999999876543  23344555667889999999999999999999764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-35  Score=223.72  Aligned_cols=192  Identities=27%  Similarity=0.302  Sum_probs=166.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++++|++|+++++++++.+.+.+|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  113 (253)
T 1hxh_A           37 DINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTE  113 (253)
T ss_dssp             CSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcH
Confidence            68888888887777   567889999999999999999999999999999999999987778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCC--CeEEEEeec
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY--AIRVNGIAP  159 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~--gi~v~~v~p  159 (208)
                      +++.+++.++|.|+++         +++||++||..+..+.++...|+++|++++.|+++++.|+. ++  ||+|++|+|
T Consensus       114 ~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~gi~v~~v~P  183 (253)
T 1hxh_A          114 SVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR-KQGYAIRVNSIHP  183 (253)
T ss_dssp             HHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHc---------CCEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEEe
Confidence            9999999999999764         48899999999999999999999999999999999999998 77  999999999


Q ss_pred             CcccCCCccCCCChHHHHHh-hhh---hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSK-ATD---YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++......+ ..... +..   ..|.+++++|+|+|++++||+++++
T Consensus       184 g~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  234 (253)
T 1hxh_A          184 DGIYTPMMQASLPK-GVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDES  234 (253)
T ss_dssp             SEECCHHHHHHSCT-TCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGG
T ss_pred             CCccCchhhhccch-hhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccc
Confidence            99999864321111 11111 223   5677889999999999999999864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.1e-34  Score=222.51  Aligned_cols=174  Identities=23%  Similarity=0.344  Sum_probs=157.8

Q ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        25 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +.+|+++.+++.++++++.+++|++|+||||||.....++.+.+.++|++++++|+.|++.++++++|.|++++      
T Consensus        71 ~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~------  144 (266)
T 3uxy_A           71 LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG------  144 (266)
T ss_dssp             CCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------
T ss_pred             cCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC------
Confidence            47899999999999999999999999999999998888888999999999999999999999999999999876      


Q ss_pred             CCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC-----CChHHHHHh
Q 028508          105 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----LAPEEIRSK  179 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~-----~~~~~~~~~  179 (208)
                        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+|+|++....     .........
T Consensus       145 --~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  221 (266)
T 3uxy_A          145 --GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHA-PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAE  221 (266)
T ss_dssp             --CEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHH
T ss_pred             --CcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHH
Confidence              79999999999999999999999999999999999999998 8899999999999999865321     222333455


Q ss_pred             hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          180 ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +....|++|+++|+|+|++++||+|+.+
T Consensus       222 ~~~~~p~~r~~~pedvA~~v~~L~s~~~  249 (266)
T 3uxy_A          222 LGRTVPLGRIAEPEDIADVVLFLASDAA  249 (266)
T ss_dssp             HHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            6677899999999999999999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.7e-34  Score=222.72  Aligned_cols=199  Identities=23%  Similarity=0.272  Sum_probs=165.8

Q ss_pred             CCcH-HHHHHHHHHHH-hcCCCeeEEEcCCCC----HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC-----CC----
Q 028508            2 GRRK-TVLRSAVAALH-SLGIPAIGLEGDVRK----REDAVRVVESTINHFGKLDILVNAAAGNFLVPA-----ED----   66 (208)
Q Consensus         2 ~R~~-~~~~~~~~~l~-~~~~~~~~~~~D~~~----~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~-----~~----   66 (208)
                      +|+. ++++++.+++. ..+.++.++.+|++|    .++++++++++.+.+|++|+||||||.....++     .+    
T Consensus        54 ~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~  133 (288)
T 2x9g_A           54 YHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNG  133 (288)
T ss_dssp             ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------
T ss_pred             eCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccc
Confidence            5777 88888888887 456788999999999    999999999999999999999999998776666     56    


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHH
Q 028508           67 -LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE  145 (208)
Q Consensus        67 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e  145 (208)
                       .+.++|+.++++|+.+++.+++.++|.|++++.  ......|+||++||..+..+.++...|+++|+|+.+|+++++.|
T Consensus       134 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  211 (288)
T 2x9g_A          134 KTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNP--NCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALE  211 (288)
T ss_dssp             CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----------CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--CCCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence             788999999999999999999999999876431  00111479999999999999999999999999999999999999


Q ss_pred             hcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCC-CCHHHHHHHHHHhcCCCC
Q 028508          146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDAV  207 (208)
Q Consensus       146 ~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~L~s~~a  207 (208)
                      +. ++||+||+|+||+|+|++ .  ..+ .....+....|++|+ ++|+|+|++++||+++.+
T Consensus       212 ~~-~~gI~vn~v~PG~v~t~~-~--~~~-~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~  269 (288)
T 2x9g_A          212 LA-PYGIRVNGVAPGVSLLPV-A--MGE-EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSA  269 (288)
T ss_dssp             HG-GGTEEEEEEEESSCSCCT-T--SCH-HHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             hh-ccCeEEEEEEeccccCcc-c--cCh-HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccc
Confidence            98 889999999999999997 3  222 223344455788888 999999999999999764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-35  Score=223.68  Aligned_cols=189  Identities=24%  Similarity=0.334  Sum_probs=162.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.   .++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        37 ~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~  113 (263)
T 2a4k_A           37 DREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT  113 (263)
T ss_dssp             ESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            688888877766553   56888999999999999999999999999999999999887778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.|.| ++         .|+||++||..+. +.++...|+++|+++.+|+++++.|+. ++||+||+|+||+
T Consensus       114 g~~~l~~~~~~~~-~~---------~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  181 (263)
T 2a4k_A          114 GSFLVARKAGEVL-EE---------GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELA-RKGVRVNVLLPGL  181 (263)
T ss_dssp             HHHHHHHHHHHHC-CT---------TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHH-hc---------CCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCc
Confidence            9999999999998 43         4889999999998 888899999999999999999999998 8999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.... . ...........|++++++|+|+|++++||+++++
T Consensus       182 v~t~~~~~~-~-~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  225 (263)
T 2a4k_A          182 IQTPMTAGL-P-PWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES  225 (263)
T ss_dssp             BCCGGGTTS-C-HHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcCchhhhc-C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999876542 2 2333445556788899999999999999999764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.8e-35  Score=223.51  Aligned_cols=194  Identities=22%  Similarity=0.215  Sum_probs=163.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~   77 (208)
                      +|+.+ .++..+++.+....+.++.+|++|+++++++++++.+++|++|+||||||....    .++.+.+.++|+++++
T Consensus        41 ~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  119 (261)
T 2wyu_A           41 YQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE  119 (261)
T ss_dssp             ESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHH
T ss_pred             cCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence            46554 344455554432347889999999999999999999999999999999998753    5677889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.+++++.|.|.+          +|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||+|
T Consensus       120 ~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v  188 (261)
T 2wyu_A          120 VSAYSLVAVARRAEPLLRE----------GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAI  188 (261)
T ss_dssp             HHTHHHHHHHHHHTTTEEE----------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEE
T ss_pred             HhhHHHHHHHHHHHHHhcc----------CCEEEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEE
Confidence            9999999999999998853          48899999999999999999999999999999999999998 889999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+|++.............+....|++|+++|+|+|++++||+++.+
T Consensus       189 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~  238 (261)
T 2wyu_A          189 SAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLA  238 (261)
T ss_dssp             EECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             eeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhh
Confidence            99999998754432223344445566788999999999999999998754

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=6.8e-35  Score=223.98  Aligned_cols=176  Identities=26%  Similarity=0.366  Sum_probs=157.7

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..+.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|++++   
T Consensus        55 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---  131 (269)
T 3vtz_A           55 SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG---  131 (269)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---
Confidence            45678999999999999999999999999999999998878888899999999999999999999999999998876   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC------C---
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------A---  172 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------~---  172 (208)
                           .|+||++||..+..+.++...|+++|+|+++|+++++.|+. + ||+||+|+||+|+|++.....      .   
T Consensus       132 -----~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  204 (269)
T 3vtz_A          132 -----HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENA  204 (269)
T ss_dssp             -----CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTH
T ss_pred             -----CCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHHHHhc-C-CCEEEEEEECCCcCcchhhhhhccccccchh
Confidence                 79999999999999999999999999999999999999998 7 899999999999998643210      0   


Q ss_pred             hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .......+....|++|+++|+|+|++++||+|+.+
T Consensus       205 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  239 (269)
T 3vtz_A          205 VERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS  239 (269)
T ss_dssp             HHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcc
Confidence            12344556677899999999999999999999865

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.4e-34  Score=219.84  Aligned_cols=191  Identities=24%  Similarity=0.235  Sum_probs=155.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+.+|++|+||||||... ..++.+.+.++|+.++++|+
T Consensus        31 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~  107 (248)
T 3asu_A           31 GRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNN  107 (248)
T ss_dssp             ESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHh
Confidence            68888888887777   346889999999999999999999999999999999999863 46677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus       108 ~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  178 (248)
T 3asu_A          108 KGLVYMTRAVLPGMVERN--------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH-GTAVRVTDIEPG  178 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CceEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecc
Confidence            999999999999998765        68999999999999999999999999999999999999998 899999999999


Q ss_pred             ccc-CCCccCCCC-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIK-DTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+ |++...... ....   .........+.+|+|+|++++||+++.+
T Consensus       179 ~v~gT~~~~~~~~~~~~~---~~~~~~~~~~~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          179 LVGGTEFSNVRFKGDDGK---AEKTYQNTVALTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             SBCC-------------------------CCBCHHHHHHHHHHHHHSCT
T ss_pred             ccccCcchhhcccCchHH---HHHHHhccCCCCHHHHHHHHHHHhcCCc
Confidence            999 886432111 1110   0111112245799999999999999754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.3e-34  Score=224.08  Aligned_cols=195  Identities=28%  Similarity=0.359  Sum_probs=166.2

Q ss_pred             CCcHH-HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.+ .++++.+++...+.++.++.+|++|.+++.++++++.+.+|++|+||||||.....++.+.+.++|+.++++|+
T Consensus        60 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  139 (283)
T 1g0o_A           60 YANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINT  139 (283)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhh
Confidence            45544 46777788877777899999999999999999999999999999999999988777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .|++.+++++.|.|.  +        .|+||++||..+..+.++ ...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       140 ~g~~~l~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  208 (283)
T 1g0o_A          140 RGQFFVAREAYKHLE--I--------GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAP  208 (283)
T ss_dssp             HHHHHHHHHHHHHSC--T--------TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHh--c--------CCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEec
Confidence            999999999999982  2        689999999998887764 89999999999999999999998 88999999999


Q ss_pred             CcccCCCccCCC----C-----hHHHHHhhhh--hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKL----A-----PEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~----~-----~~~~~~~~~~--~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++.....    .     .......+..  ..|++|+++|+|+|++++||+|+.+
T Consensus       209 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  267 (283)
T 1g0o_A          209 GGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDG  267 (283)
T ss_dssp             CCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999998643210    0     1222333444  6788999999999999999999864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=5.5e-35  Score=224.09  Aligned_cols=194  Identities=19%  Similarity=0.158  Sum_probs=162.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~   76 (208)
                      +|+. +.++..+++........++++|++|+++++++++++.+++|++|+||||||....    .++.+ .+.++|++++
T Consensus        42 ~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  120 (265)
T 1qsg_A           42 YQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH  120 (265)
T ss_dssp             ESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHH
T ss_pred             cCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHH
Confidence            4555 3445555555443345789999999999999999999999999999999998753    45566 8899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++++.|.|.+          +|+||++||..+..+.+++..|+++|++++.|+++++.|+. ++||+||+
T Consensus       121 ~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~  189 (265)
T 1qsg_A          121 DISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNA  189 (265)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEE
T ss_pred             HHHhHHHHHHHHHHHHHhcc----------CCEEEEEcchhhccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEE
Confidence            99999999999999998853          47899999999999999999999999999999999999998 89999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+|+|++.............+....|++++++|+|+|++++||+++.+
T Consensus       190 v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~  240 (265)
T 1qsg_A          190 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLS  240 (265)
T ss_dssp             EEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             EEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence            999999999765432223334445556788999999999999999998754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.1e-34  Score=217.94  Aligned_cols=197  Identities=23%  Similarity=0.359  Sum_probs=171.0

Q ss_pred             CCcHHHHHHHHHHH-HhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC---CCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---AEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~   77 (208)
                      +|+.++++++.+++ ...+.++.++.+|++|+++++++++++.++++++|+||||||.....+   +.+.+.++|+.+++
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  112 (250)
T 2cfc_A           33 DLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA  112 (250)
T ss_dssp             ESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence            68888888888887 444567889999999999999999999999999999999999876555   67788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.+++.++|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+.|
T Consensus       113 ~n~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v  183 (250)
T 2cfc_A          113 VNVRGIFLGCRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYA-GSGIRCNAV  183 (250)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HhhHHHHHHHHHHHHHHHhCC--------CCEEEEECChhhccCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEE
Confidence            999999999999999998875        68999999999999999999999999999999999999998 889999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+++|++.........+...+....|.+++++|+|+|++++||+++++
T Consensus       184 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  233 (250)
T 2cfc_A          184 CPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDA  233 (250)
T ss_dssp             EECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTC
T ss_pred             EeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999998754311222333444556788899999999999999998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-35  Score=227.33  Aligned_cols=189  Identities=31%  Similarity=0.313  Sum_probs=160.5

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .++++++..++...+.++.++.+|++|+++++++++++.+++|++|+||||||+....  .+.+.++|+.++++|+.+++
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~  133 (287)
T 3pxx_A           56 SRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVI  133 (287)
T ss_dssp             HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHH
T ss_pred             hHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhH
Confidence            7788888888888888899999999999999999999999999999999999987654  34788999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      .++++++|+|.+          +++||++||..+..+.           ++...|+++|+++++|+++++.|+. ++||+
T Consensus       134 ~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~  202 (287)
T 3pxx_A          134 NTVHAALPYLTS----------GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA-PQSIR  202 (287)
T ss_dssp             HHHHHHGGGCCT----------TCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCE
T ss_pred             HHHHHHHHHhhc----------CcEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh-hcCcE
Confidence            999999998832          6899999999888765           7788999999999999999999998 88999


Q ss_pred             EEEeecCcccCCCccCCCC----------h--HHHHH--hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          154 VNGIAPGPIKDTAGVSKLA----------P--EEIRS--KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~----------~--~~~~~--~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+||+|+|++......          +  .....  ......| +++++|+|+|++++||+|+++
T Consensus       203 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a  269 (287)
T 3pxx_A          203 ANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDES  269 (287)
T ss_dssp             EEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             EEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhh
Confidence            9999999999997653110          0  00011  1223344 788999999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=4.2e-34  Score=218.58  Aligned_cols=187  Identities=29%  Similarity=0.341  Sum_probs=165.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++..   ++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        38 ~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  114 (260)
T 1nff_A           38 DILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT  114 (260)
T ss_dssp             ESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            5888888877776643   4788999999999999999999999999999999999887778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+.|+||+
T Consensus       115 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  185 (260)
T 1nff_A          115 GVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG-PSGIRVNSIHPGL  185 (260)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCC
Confidence            99999999999998875        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++..  .....    +. ..|++++.+|+|+|++++||+++.+
T Consensus       186 v~t~~~~--~~~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~~  224 (260)
T 1nff_A          186 VKTPMTD--WVPED----IF-QTALGRAAEPVEVSNLVVYLASDES  224 (260)
T ss_dssp             BCSGGGT--TSCTT----CS-CCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCCccc--cchhh----HH-hCccCCCCCHHHHHHHHHHHhCccc
Confidence            9998753  11111    11 4577889999999999999998754

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.1e-34  Score=221.51  Aligned_cols=194  Identities=20%  Similarity=0.241  Sum_probs=158.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++... .++.++.+|++|+++++++++++.+.+|++|+||||||.... .++.+.+.++|+.++++|+
T Consensus        52 ~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~  130 (272)
T 2nwq_A           52 GRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNI  130 (272)
T ss_dssp             ESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             ECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence            68888899888888654 578899999999999999999999999999999999998764 6778899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+++.++|.|++++        .| +||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       131 ~g~~~~~~~~~~~m~~~~--------~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~-~~gIrvn~v~P  201 (272)
T 2nwq_A          131 KGLLYSTRLLLPRLIAHG--------AGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEP  201 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHC--------TTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHTTCT-TSCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEc
Confidence            999999999999998875        57 999999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++.........  ...........+++|+|+|++++||+++.+
T Consensus       202 G~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          202 GLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             CSBC----------------------CCCCBCHHHHHHHHHHHHTSCT
T ss_pred             CCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHhCCCc
Confidence            9999987543211000  001111122235799999999999999754

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=4.6e-34  Score=216.71  Aligned_cols=188  Identities=21%  Similarity=0.242  Sum_probs=163.6

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCC--CCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVI   76 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~--~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~   76 (208)
                      ++|+.++++++.+++...+ .+..++.+|+  ++.+++.++++++.+.+|++|+||||||... ..++.+.+.++|++++
T Consensus        44 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~  123 (247)
T 3i1j_A           44 LGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVM  123 (247)
T ss_dssp             EESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHH
T ss_pred             EecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHH
Confidence            3689999999999998765 4566677776  9999999999999999999999999999864 4677888999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCC-CCeEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVN  155 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~-~gi~v~  155 (208)
                      ++|+.+++.+++.++|.|++++        .++||++||..+..+.+++..|+++|+|+++|+++++.|+. + +||+|+
T Consensus       124 ~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~i~v~  194 (247)
T 3i1j_A          124 HVNVNATFMLTRALLPLLKRSE--------DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELE-GVTAVRAN  194 (247)
T ss_dssp             HHHTHHHHHHHHHHHHHHTTSS--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTSSEEEE
T ss_pred             HHhhHHHHHHHHHHHHHHHhCC--------CCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhc-CCCCeEEE
Confidence            9999999999999999998765        68999999999999999999999999999999999999997 5 799999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+||+++|++.....          ...+..+...|+|+|+.++||+|+++
T Consensus       195 ~v~PG~v~t~~~~~~~----------~~~~~~~~~~p~dva~~~~~l~s~~~  236 (247)
T 3i1j_A          195 SINPGATRTGMRAQAY----------PDENPLNNPAPEDIMPVYLYLMGPDS  236 (247)
T ss_dssp             EEECCCCSSHHHHHHS----------TTSCGGGSCCGGGGTHHHHHHHSGGG
T ss_pred             EEecCcccCccchhcc----------cccCccCCCCHHHHHHHHHHHhCchh
Confidence            9999999997542211          11122356789999999999999875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3.9e-34  Score=216.21  Aligned_cols=176  Identities=28%  Similarity=0.367  Sum_probs=155.3

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..+.+|++| +++.++++++.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++   
T Consensus        45 ~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~---  120 (239)
T 2ekp_A           45 AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG---  120 (239)
T ss_dssp             CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---
Confidence            6778999999 999999999999999999999999988777888899999999999999999999999999998876   


Q ss_pred             CCCCCCceEEEeccccccccC--CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHh
Q 028508          102 ASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~  179 (208)
                           .++||++||..+..+.  ++...|+++|++++.|+++++.|+. ++||+|++|+||+++|++.......+.....
T Consensus       121 -----~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  194 (239)
T 2ekp_A          121 -----WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWA-RLGIRVNLLCPGYVETEFTLPLRQNPELYEP  194 (239)
T ss_dssp             -----CEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHH
T ss_pred             -----CcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCccCchhhccccCHHHHHH
Confidence                 6899999999998887  8899999999999999999999998 8899999999999999875421111223334


Q ss_pred             hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          180 ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +....|++++.+|+|+|++++||+++++
T Consensus       195 ~~~~~p~~~~~~~~dvA~~~~~l~s~~~  222 (239)
T 2ekp_A          195 ITARIPMGRWARPEEIARVAAVLCGDEA  222 (239)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            4456788899999999999999999764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.1e-34  Score=220.63  Aligned_cols=195  Identities=26%  Similarity=0.340  Sum_probs=166.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.   .++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        43 ~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  119 (263)
T 3ak4_A           43 DLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNAR  119 (263)
T ss_dssp             ESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence            577777777666553   26788999999999999999999999999999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++++.|.|++++.       .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+.|+||+
T Consensus       120 g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  191 (263)
T 3ak4_A          120 GVFLANQIACRHFLASNT-------KGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA-PKNIRVNCVCPGF  191 (263)
T ss_dssp             HHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcCC-------CeEEEEecccccccCCCCchhHHHHHHHHHHHHHHHHHHHh-HcCeEEEEEeccc
Confidence            999999999999987531       38999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCC---------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.....         ........+....|.+++++|+|+|++++||+++.+
T Consensus       192 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~  246 (263)
T 3ak4_A          192 VKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAA  246 (263)
T ss_dssp             BTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9998643210         002222334455688899999999999999999764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.8e-34  Score=217.09  Aligned_cols=177  Identities=21%  Similarity=0.291  Sum_probs=141.0

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..+.+|++|++++.++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++.++++++|.|++++   
T Consensus        48 ~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---  124 (250)
T 2fwm_X           48 FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR---  124 (250)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC---
Confidence            45678999999999999999999999999999999988777888899999999999999999999999999998876   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH-hh
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KA  180 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~  180 (208)
                           .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|++|+||+++|++............ .+
T Consensus       125 -----~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  198 (250)
T 2fwm_X          125 -----GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELA-GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRI  198 (250)
T ss_dssp             -----CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC-------------------
T ss_pred             -----CCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHHHhC-ccCCEEEEEECCcccCccccccccChhHHHHHH
Confidence                 68999999999999999999999999999999999999998 889999999999999987543211111111 22


Q ss_pred             hh-------hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          181 TD-------YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       181 ~~-------~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ..       ..|++|+++|+|+|++++||+++++
T Consensus       199 ~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  232 (250)
T 2fwm_X          199 RGFGEQFKLGIPLGKIARPQEIANTILFLASDLA  232 (250)
T ss_dssp             -----------------CHHHHHHHHHHHHSGGG
T ss_pred             hhhhhcccccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            22       5678889999999999999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.1e-34  Score=221.79  Aligned_cols=193  Identities=19%  Similarity=0.131  Sum_probs=165.8

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHH--HhCCcc--EEEeCCCCCCC--CCCCC-CCHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN--HFGKLD--ILVNAAAGNFL--VPAED-LSPNGF   72 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id--~lv~~ag~~~~--~~~~~-~~~~~~   72 (208)
                      +|+.++++++.+++...  +.++.++.+|++|+++++++++++.+  .+|++|  +||||||....  .++.+ .+.++|
T Consensus        40 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~  119 (259)
T 1oaa_A           40 ARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV  119 (259)
T ss_dssp             ESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHH
T ss_pred             eCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHH
Confidence            68889999999988765  55788999999999999999999988  678899  99999998653  45666 689999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCC
Q 028508           73 RTVIEIDSVGTFIMCHEALKYLKKG--GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY  150 (208)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  150 (208)
                      +.++++|+.|++.++++++|.|+++  +        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. + 
T Consensus       120 ~~~~~~N~~g~~~l~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~-  189 (259)
T 1oaa_A          120 NNYWALNLTSMLCLTSGTLNAFQDSPGL--------SKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEP-S-  189 (259)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHTSCCCTTC--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCT-T-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCC--------CceEEEEcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCC-C-
Confidence            9999999999999999999999765  3        58999999999999999999999999999999999999996 4 


Q ss_pred             CeEEEEeecCcccCCCccCCC---ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          151 AIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       151 gi~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                       |+||+|+||+++|++.....   ........+....|.+++++|+|+|+.++||+++
T Consensus       190 -i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          190 -VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             -EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred             -ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence             99999999999998643211   1123334455667889999999999999999985

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.7e-33  Score=215.03  Aligned_cols=197  Identities=26%  Similarity=0.312  Sum_probs=172.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.++++..+.++.++.+|++|+++++++++++.++++++|+||||||... ..++.+.+.++|+..+++|+
T Consensus        44 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~  123 (260)
T 3awd_A           44 DLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINL  123 (260)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhcc
Confidence            68888888888888877778999999999999999999999999999999999999876 56778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch--hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .+++.+++.+.|.|++++        .++||++||..+..+.++.  ..|+++|++++.|+++++.|+. ++||+|+.|+
T Consensus       124 ~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~  194 (260)
T 3awd_A          124 NGMFRSCQAVGRIMLEQK--------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVA  194 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEEecchhcccCCCCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEE
Confidence            999999999999998765        6899999999988877777  8999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++.........+...+....|.+++.+|+|+|++++||+++.+
T Consensus       195 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  243 (260)
T 3awd_A          195 PTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAA  243 (260)
T ss_dssp             ECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             eeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchh
Confidence            9999998754111122333444556788899999999999999998753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=6.4e-34  Score=217.51  Aligned_cols=183  Identities=19%  Similarity=0.196  Sum_probs=150.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+++.+.   +...+  +.++.+|++|+++++++++++.+.+|++|+||||||...... .+.+.++|++++++|+.
T Consensus        58 ~r~~~~~~~~---~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~  131 (260)
T 3gem_A           58 YRTEHASVTE---LRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHML  131 (260)
T ss_dssp             ESSCCHHHHH---HHHHT--CEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTH
T ss_pred             eCChHHHHHH---HHhcC--CeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHH
Confidence            4665554333   33323  678999999999999999999999999999999999876654 56788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. + +|+||+|+||+
T Consensus       132 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~-~Irvn~v~PG~  201 (260)
T 3gem_A          132 APYLINLHCEPLLTASE--------VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA-P-LVKVNGIAPAL  201 (260)
T ss_dssp             HHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECT
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEeecc
Confidence            99999999999998876        68999999999999999999999999999999999999998 7 69999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      ++|++..    ............|++|+++|+|+|++++||++
T Consensus       202 v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~  240 (260)
T 3gem_A          202 LMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLLD  240 (260)
T ss_dssp             TCC-------------------CCSCCCCCTHHHHHHHHHHHH
T ss_pred             cccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence            9988543    22334455667889999999999999999984

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.2e-33  Score=212.98  Aligned_cols=185  Identities=21%  Similarity=0.260  Sum_probs=162.2

Q ss_pred             CCCcHHHHHHHHHHHH-hcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++. ..+.++.++++|++|+++++++++++.+.+|++|++|||||.....++.+.+.++|++++++|
T Consensus        32 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N  111 (235)
T 3l77_A           32 GARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVN  111 (235)
T ss_dssp             EESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHH
Confidence            3689999999999887 447789999999999999999999999999999999999999888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++++++|.|...         ++++|+++|..+..+.++...|+++|+++++|+++++  +. .+||+|++|+|
T Consensus       112 ~~g~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~--~~-~~~i~v~~v~P  179 (235)
T 3l77_A          112 LLGVWRTLKAFLDSLKRT---------GGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQ--IE-NPDVRFFELRP  179 (235)
T ss_dssp             THHHHHHHHHHHHHHHHH---------TCEEEEECCGGGSSCCTTCHHHHHHHHHHHHHHHHHH--HH-CTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhc---------CCcEEEEecchhcccCCCcchHHHHHHHHHHHHHHHh--hc-CCCeEEEEEeC
Confidence            999999999999999544         5889999999999999999999999999999999994  44 56999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++........          +..++.+|+|+|++++||+++.+
T Consensus       180 G~v~T~~~~~~~~~~----------~~~~~~~p~dva~~v~~l~~~~~  217 (235)
T 3l77_A          180 GAVDTYFGGSKPGKP----------KEKGYLKPDEIAEAVRCLLKLPK  217 (235)
T ss_dssp             CSBSSSTTTCCSCCC----------GGGTCBCHHHHHHHHHHHHTSCT
T ss_pred             CccccccccccCCcc----------cccCCCCHHHHHHHHHHHHcCCC
Confidence            999998765433211          11267899999999999999875

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-33  Score=218.07  Aligned_cols=195  Identities=28%  Similarity=0.333  Sum_probs=170.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+.++++|+||||||.....++.+.+.++|+.++++|+.
T Consensus        75 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  154 (285)
T 2c07_A           75 SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLN  154 (285)
T ss_dssp             ESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhH
Confidence            57888899998988877778999999999999999999999999999999999999987778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|.+++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+.|+||+
T Consensus       155 g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  225 (285)
T 2c07_A          155 SLFYITQPISKRMINNR--------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGF  225 (285)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCc
Confidence            99999999999998765        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....  ............|.+++.+|+|+|++++||+++.+
T Consensus       226 v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~  269 (285)
T 2c07_A          226 ISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS  269 (285)
T ss_dssp             BCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             EecCchhhc--CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            999865432  22333444556788889999999999999998754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=7.1e-34  Score=217.91  Aligned_cols=196  Identities=24%  Similarity=0.333  Sum_probs=145.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++.+|+++.++++++++++.+.+ +++|+||||||.....++.+.+.++|++.+++|+
T Consensus        45 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~  124 (266)
T 1xq1_A           45 ARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL  124 (266)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            688888999888888777788999999999999999999999999 8999999999988777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++++.|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+.|+||
T Consensus       125 ~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  195 (266)
T 1xq1_A          125 ESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPA  195 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHS--------SCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEeeC
Confidence            999999999999998765        68999999999998888999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++..... ............|++++++|+|+|++++||+++++
T Consensus       196 ~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  241 (266)
T 1xq1_A          196 VIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA  241 (266)
T ss_dssp             SCC--------------------------CCGGGGHHHHHHHTSGGG
T ss_pred             CCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99998755432 12222334445677889999999999999998753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.3e-34  Score=226.42  Aligned_cols=194  Identities=24%  Similarity=0.276  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .++++++.+++...+.++.++.+|++|.++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~  150 (322)
T 3qlj_A           71 GSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHF  150 (322)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence            67888999999888888999999999999999999999999999999999999988888889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .+++++.|.|.+.....  ...+|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|| +.|
T Consensus       151 ~~~~~~~~~~~~~~~~~--~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG-~~t  226 (322)
T 3qlj_A          151 ATMRHAAAYWRGLSKAG--KAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMG-RYGVTVNAIAPS-ART  226 (322)
T ss_dssp             HHHHHHHHHHHHHHHTT--CCCCEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-TTS
T ss_pred             HHHHHHHHHHHHccccC--CCCCcEEEEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEecCC-CCC
Confidence            99999999997542100  01147999999999999999999999999999999999999999 899999999999 888


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++.........     ....+..+..+|+|+|++++||+|+.+
T Consensus       227 ~~~~~~~~~~~-----~~~~~~~~~~~pedva~~v~~L~s~~~  264 (322)
T 3qlj_A          227 RMTETVFAEMM-----ATQDQDFDAMAPENVSPLVVWLGSAEA  264 (322)
T ss_dssp             CCSCCSCCC-------------CCTTCGGGTHHHHHHHTSGGG
T ss_pred             ccchhhhhhhh-----hccccccCCCCHHHHHHHHHHHhCccc
Confidence            87654432211     111222356799999999999999865

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.2e-33  Score=223.86  Aligned_cols=178  Identities=25%  Similarity=0.271  Sum_probs=159.6

Q ss_pred             HHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 028508            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (208)
Q Consensus         8 ~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (208)
                      ++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+.++++|+.+++.++
T Consensus        89 l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  168 (346)
T 3kvo_A           89 IYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLAS  168 (346)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            67788888888888999999999999999999999999999999999999988888899999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEecccccccc--CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc-ccC
Q 028508           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP-IKD  164 (208)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~-v~t  164 (208)
                      ++++|+|++++        .|+||++||..+..+  .+++..|+++|+++.+|+++++.|+.  +||+||+|+||+ ++|
T Consensus       169 ~~~lp~m~~~~--------~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~gIrvn~v~PG~~i~T  238 (346)
T 3kvo_A          169 KACIPYLKKSK--------VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK--GEIAVNALWPKTAIHT  238 (346)
T ss_dssp             HHHHHHHTTCS--------SCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT--TTCEEEEEECSBCBCC
T ss_pred             HHHHHHHHHCC--------CCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCcccc
Confidence            99999998876        689999999998887  78899999999999999999999996  689999999995 877


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++.          .......+.++..+|+|+|++++||+++
T Consensus       239 ~~~----------~~~~~~~~~~r~~~pedvA~~v~~L~s~  269 (346)
T 3kvo_A          239 AAM----------DMLGGPGIESQCRKVDIIADAAYSIFQK  269 (346)
T ss_dssp             HHH----------HHHCC--CGGGCBCTHHHHHHHHHHHTS
T ss_pred             HHH----------HhhccccccccCCCHHHHHHHHHHHHhc
Confidence            532          2233344677889999999999999998

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.1e-33  Score=216.29  Aligned_cols=198  Identities=31%  Similarity=0.467  Sum_probs=171.0

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +| +.++++++.+++...+.++.++.+|++|++++.++++++.+.++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        38 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  117 (261)
T 1gee_A           38 YRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNL  117 (261)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             cCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhh
Confidence            56 78888888888887777788999999999999999999999999999999999988777777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|.+++.       .++||++||..+..+.++...|+++|++++.|++.++.|+. ++||+|+.|+||
T Consensus       118 ~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  189 (261)
T 1gee_A          118 TGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPG  189 (261)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCC-------CCEEEEeCCHHhcCCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeC
Confidence            9999999999999987531       37899999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++.............+....|.+++.+|+|+|++++||+++.+
T Consensus       190 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (261)
T 1gee_A          190 AINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA  236 (261)
T ss_dssp             SBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99998654221112223334445677889999999999999998753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4e-34  Score=218.74  Aligned_cols=196  Identities=19%  Similarity=0.197  Sum_probs=158.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHH-hCCccEEEeCCCC--C-----CCCCCCCCCHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAG--N-----FLVPAEDLSPNGFR   73 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~lv~~ag~--~-----~~~~~~~~~~~~~~   73 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+. +|++|+||||||.  .     ...++.+.+.++|+
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~  115 (260)
T 2qq5_A           36 GRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD  115 (260)
T ss_dssp             ESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHH
T ss_pred             eCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHH
Confidence            68889999999988877778889999999999999999999886 8999999999953  2     23567788899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      .++++|+.+++.+++.+.|.|++++        .|+||++||..+..+. +...|+++|+++++|+++++.|+. ++||+
T Consensus       116 ~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~-~~gi~  185 (260)
T 2qq5_A          116 DINNVGLRGHYFCSVYGARLMVPAG--------QGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELR-RHGVS  185 (260)
T ss_dssp             HHHTTTTHHHHHHHHHHHHHHGGGT--------CCEEEEECCGGGTSCC-SSHHHHHHHHHHHHHHHHHHHHHG-GGTCE
T ss_pred             HHHhhcchhHHHHHHHHHHHHhhcC--------CcEEEEEcChhhcCCC-CCCchHHHHHHHHHHHHHHHHHhc-cCCeE
Confidence            9999999999999999999998765        6899999999887654 468899999999999999999998 88999


Q ss_pred             EEEeecCcccCCCccCCCChHHHH-Hhhh--hhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          154 VNGIAPGPIKDTAGVSKLAPEEIR-SKAT--DYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+|+||+|+|++........... ....  ...|+++..+|+|+|++++||+|+++
T Consensus       186 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          186 CVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPN  242 (260)
T ss_dssp             EEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCTT
T ss_pred             EEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcc
Confidence            999999999999754322111110 0101  12345566799999999999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.7e-33  Score=213.65  Aligned_cols=172  Identities=24%  Similarity=0.295  Sum_probs=145.2

Q ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        25 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +.+|++|+++++++++++.+.+|++|+||||||.....++.+.+.++|+.++++|+.+++.++++++|.|++++      
T Consensus        58 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------  131 (247)
T 1uzm_A           58 VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK------  131 (247)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------
T ss_pred             eeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------
Confidence            78999999999999999999999999999999988777788899999999999999999999999999998865      


Q ss_pred             CCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhh
Q 028508          105 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM  184 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~  184 (208)
                        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+||.|+||+++|++.... . ...........
T Consensus       132 --~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~  206 (247)
T 1uzm_A          132 --FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRAL-D-ERIQQGALQFI  206 (247)
T ss_dssp             --CEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHS-C-HHHHHHHGGGC
T ss_pred             --CCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCCcccchhhc-C-HHHHHHHHhcC
Confidence              68999999999999999999999999999999999999998 8899999999999999864422 1 22233344567


Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCC
Q 028508          185 AAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       185 ~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |.+++.+|+|+|++++||+++++
T Consensus       207 p~~~~~~~~dvA~~~~~l~s~~~  229 (247)
T 1uzm_A          207 PAKRVGTPAEVAGVVSFLASEDA  229 (247)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CCCCCcCHHHHHHHHHHHcCccc
Confidence            88899999999999999999754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-34  Score=219.24  Aligned_cols=190  Identities=30%  Similarity=0.421  Sum_probs=162.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++.    ++.++.+|++|+++++++++++.+++|++|++|||||.... .++.+.+.++|++++++|+
T Consensus        40 ~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~  115 (270)
T 1yde_A           40 DKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL  115 (270)
T ss_dssp             ESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            578877777666552    37889999999999999999999999999999999998753 5677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++++.|.|.++         .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus       116 ~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~Pg  185 (270)
T 1yde_A          116 LGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES-PYGVRVNCISPG  185 (270)
T ss_dssp             HHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHC---------CCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeC
Confidence            99999999999999764         48899999999998999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCC---CC-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          161 PIKDTAGVSK---LA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       161 ~v~t~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +++|++....   .. ............|++|+++|+|+|++++||+|+
T Consensus       186 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~  234 (270)
T 1yde_A          186 NIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE  234 (270)
T ss_dssp             SBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred             ccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc
Confidence            9999864321   11 111112223456889999999999999999986

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1.7e-33  Score=213.16  Aligned_cols=194  Identities=25%  Similarity=0.322  Sum_probs=171.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  112 (244)
T 1edo_A           33 ARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT  112 (244)
T ss_dssp             SSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhH
Confidence            68888888888888877778889999999999999999999999999999999999887777778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|++++        .++||++||..+..+.++...|+++|++++.|++.++.|+. ++||+|+.|+||+
T Consensus       113 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (244)
T 1edo_A          113 GVFLCTQAATKIMMKKR--------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA-SRNINVNVVCPGF  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEECChhhcCCCCCCccchhhHHHHHHHHHHHHHHhh-hcCCEEEEEeeCc
Confidence            99999999999998765        68999999999988889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhc-CCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~  206 (208)
                      ++|++.... . ...........|.+++.+|+|+|++++||+ ++.
T Consensus       184 v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1edo_A          184 IASDMTAKL-G-EDMEKKILGTIPLGRTGQPENVAGLVEFLALSPA  227 (244)
T ss_dssp             BCSHHHHTT-C-HHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSG
T ss_pred             cccchhhhc-C-hHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            999865432 1 223334445668888999999999999998 543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-33  Score=220.20  Aligned_cols=197  Identities=20%  Similarity=0.172  Sum_probs=165.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+
T Consensus        61 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~  140 (301)
T 3tjr_A           61 SDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDL  140 (301)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhh
Confidence            36899999999999988888899999999999999999999999999999999999998888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++++++|.|++++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||
T Consensus       141 ~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  212 (301)
T 3tjr_A          141 WGSIHAVEAFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVK-PNGIGVSVLCPM  212 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECC
Confidence            9999999999999987642       48999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCC--------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          161 PIKDTAGVSKLA--------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       161 ~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+|++......        .......+.......++.+|+|+|+.++.++..
T Consensus       213 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~  265 (301)
T 3tjr_A          213 VVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA  265 (301)
T ss_dssp             CCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhc
Confidence            999986542110        000001111112233567999999999988654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.3e-35  Score=234.12  Aligned_cols=175  Identities=23%  Similarity=0.232  Sum_probs=153.8

Q ss_pred             eeEEEcCCCCH--H------------------HHHHHHHHHHHHhCCccEEEeCCCCC--CCCCCCCCCHHHHHHHHHHH
Q 028508           22 AIGLEGDVRKR--E------------------DAVRVVESTINHFGKLDILVNAAAGN--FLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus        22 ~~~~~~D~~~~--~------------------~~~~~~~~~~~~~g~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +..+.+|+++.  +                  +++++++++.+++|++|+||||||+.  ...++.+.+.++|++++++|
T Consensus        67 ~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN  146 (329)
T 3lt0_A           67 LDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKS  146 (329)
T ss_dssp             EEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHH
Confidence            56788888888  7                  99999999999999999999999975  34778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchh-HHHHhHHHHHHHHHHHHHHhcCC-CCeEEEEe
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGI  157 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~-~y~~sKaa~~~~~~~la~e~~~~-~gi~v~~v  157 (208)
                      +.|++.+++.++|.|++          .|+||++||..+..+.+++. .|+++|+|+.+|+++|+.|+. + +||+||+|
T Consensus       147 ~~g~~~l~~~~~p~m~~----------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~-~~~gI~vn~v  215 (329)
T 3lt0_A          147 SYSLISLCKYFVNIMKP----------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTI  215 (329)
T ss_dssp             THHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEE
T ss_pred             hHHHHHHHHHHHHHHhh----------CCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEEE
Confidence            99999999999999976          48899999999999999986 999999999999999999998 8 89999999


Q ss_pred             ecCcccCCCccCCCCh-------------------------------------------HHHHHhhhhhhcCCCCCCHHH
Q 028508          158 APGPIKDTAGVSKLAP-------------------------------------------EEIRSKATDYMAAYKFGEKWD  194 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~d  194 (208)
                      +||+|+|++.......                                           ++.........|++|+++|+|
T Consensus       216 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  295 (329)
T 3lt0_A          216 SAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTD  295 (329)
T ss_dssp             EECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHH
T ss_pred             ecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHH
Confidence            9999999876543210                                           012345567789999999999


Q ss_pred             HHHHHHHhcCCCC
Q 028508          195 IAMAALYLASDAV  207 (208)
Q Consensus       195 va~~~~~L~s~~a  207 (208)
                      +|++++||+|+.+
T Consensus       296 vA~~v~fL~s~~a  308 (329)
T 3lt0_A          296 IGSVASFLLSRES  308 (329)
T ss_dssp             HHHHHHHHHSGGG
T ss_pred             HHHHHHHHhCchh
Confidence            9999999999875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.4e-34  Score=220.96  Aligned_cols=191  Identities=24%  Similarity=0.219  Sum_probs=158.4

Q ss_pred             CCcHHH-HHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhC---CccEEEeCCCCCC-----CCCCCCCCHHHH
Q 028508            2 GRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG---KLDILVNAAAGNF-----LVPAEDLSPNGF   72 (208)
Q Consensus         2 ~R~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g---~id~lv~~ag~~~-----~~~~~~~~~~~~   72 (208)
                      +|+.++ ++++.+++   +.++.++.+|++|+++++++++++.+.+|   ++|+||||||...     ..++.+.+.++|
T Consensus        40 ~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~  116 (269)
T 2h7i_A           40 GFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV  116 (269)
T ss_dssp             ECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH
T ss_pred             ecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHH
Confidence            455544 34444332   45688899999999999999999999999   9999999999876     456778899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      ++++++|+.+++.++++++|.|.+          .|+||++||..+ .+.+++..|+++|+++++|+++++.|+. ++||
T Consensus       117 ~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~iss~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi  184 (269)
T 2h7i_A          117 SKGIHISAYSYASMAKALLPIMNP----------GGSIVGMDFDPS-RAMPAYNWMTVAKSALESVNRFVAREAG-KYGV  184 (269)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECCCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTC
T ss_pred             HHHHHHhhHHHHHHHHHHHHhhcc----------CCeEEEEcCccc-cccCchHHHHHHHHHHHHHHHHHHHHhc-ccCc
Confidence            999999999999999999998864          478999999876 6778899999999999999999999998 8999


Q ss_pred             EEEEeecCcccCCCccCC----CChH------HHHHhhhhhhcCC-CCCCHHHHHHHHHHhcCCCC
Q 028508          153 RVNGIAPGPIKDTAGVSK----LAPE------EIRSKATDYMAAY-KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~----~~~~------~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+|+||+|+|++....    ..+.      .....+....|++ |+++|+|+|++++||+|+.+
T Consensus       185 ~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~  250 (269)
T 2h7i_A          185 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWL  250 (269)
T ss_dssp             EEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSC
T ss_pred             EEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchh
Confidence            999999999999864321    1111      1122344567888 69999999999999999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.4e-34  Score=218.14  Aligned_cols=183  Identities=24%  Similarity=0.291  Sum_probs=152.2

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL   94 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~   94 (208)
                      +.++.++++|++|+++++++++.+.+ +|++|++|||||.....    +..+.+.++|++++++|+.+++.++++++|.|
T Consensus        51 ~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  129 (257)
T 3tl3_A           51 GDRARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERI  129 (257)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence            56788999999999999999998877 89999999999986532    22357899999999999999999999999999


Q ss_pred             HhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChH
Q 028508           95 KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE  174 (208)
Q Consensus        95 ~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~  174 (208)
                      .+...........|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||+|+|++....  .+
T Consensus       130 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~--~~  206 (257)
T 3tl3_A          130 AKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLFDTPLLASL--PE  206 (257)
T ss_dssp             TTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTC-----CH
T ss_pred             HHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecCccChhhhhc--cH
Confidence            87321111112278999999999999999999999999999999999999998 8999999999999999976542  23


Q ss_pred             HHHHhhhhhhcC-CCCCCHHHHHHHHHHhcCC
Q 028508          175 EIRSKATDYMAA-YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       175 ~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~  205 (208)
                      ..........|. +|+++|+|+|++++||+++
T Consensus       207 ~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~  238 (257)
T 3tl3_A          207 EARASLGKQVPHPSRLGNPDEYGALAVHIIEN  238 (257)
T ss_dssp             HHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC
Confidence            344556667787 8999999999999999986

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-33  Score=209.15  Aligned_cols=186  Identities=16%  Similarity=0.181  Sum_probs=166.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|++++.++++++.+.+|++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        40 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  119 (244)
T 2bd0_A           40 SRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK  119 (244)
T ss_dssp             ESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhH
Confidence            68888899988888776777899999999999999999999999999999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+|+.|+||+
T Consensus       120 ~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  190 (244)
T 2bd0_A          120 GTFFLTQALFALMERQH--------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGA  190 (244)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEEecchhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEECCC
Confidence            99999999999998765        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++........           ..++.+|+|+|++++||+++.+
T Consensus       191 v~t~~~~~~~~~~-----------~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          191 VYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             BCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             ccchhhhhccccc-----------cccCCCHHHHHHHHHHHHhCCc
Confidence            9999764422110           1257899999999999999765

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.2e-32  Score=209.62  Aligned_cols=195  Identities=30%  Similarity=0.432  Sum_probs=172.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.++++++|+||||||.....++ +.+.++|+..+++|+.
T Consensus        42 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~  120 (255)
T 1fmc_A           42 DINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVF  120 (255)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTH
T ss_pred             cCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhH
Confidence            688888888888888777789999999999999999999999999999999999998776555 7889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|.+++        .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+++.++||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~Pg~  191 (255)
T 1fmc_A          121 SFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGA  191 (255)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeccc
Confidence            99999999999998765        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++...... ...........|.+++++++|+|++++||+++++
T Consensus       192 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (255)
T 1fmc_A          192 ILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA  236 (255)
T ss_dssp             BCSHHHHTTCC-HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcchhhhhccC-hHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCcc
Confidence            99986544332 2333445556788899999999999999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-33  Score=212.65  Aligned_cols=188  Identities=28%  Similarity=0.297  Sum_probs=149.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.   .++.++.+|+++.+++.+++++    .+++|++|||||......+.+.+.++|+.++++|+.
T Consensus        45 ~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  117 (249)
T 3f9i_A           45 GSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISK----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLK  117 (249)
T ss_dssp             ESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHT----CSCCSEEEECCC-------------CHHHHHHHHTH
T ss_pred             cCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHH
Confidence            688888888887773   4688899999999999887764    378999999999988777778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||+
T Consensus       118 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  188 (249)
T 3f9i_A          118 ANFILNREAIKKMIQKR--------YGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA-TRGITVNAVAPGF  188 (249)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCC--------CcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCc
Confidence            99999999999998876        78999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....  .......+....|.+++.+++|+|++++||+++++
T Consensus       189 v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  232 (249)
T 3f9i_A          189 IKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNA  232 (249)
T ss_dssp             BC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            999875543  23344566677899999999999999999999764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.6e-33  Score=214.66  Aligned_cols=189  Identities=17%  Similarity=0.235  Sum_probs=161.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+ +...+.++..+     |.++++++++++.+++|++|+||||||.. ...++.+.+.++|++++++|
T Consensus        31 ~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N  104 (254)
T 1zmt_A           31 HDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEAL  104 (254)
T ss_dssp             CCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHH
Confidence            4688888877766 66656566544     67888999999999999999999999987 56777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       105 ~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~P  175 (254)
T 1zmt_A          105 QIRPFALVNAVASQMKKRK--------SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYNIPVFAIGP  175 (254)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            9999999999999998875        68999999999999999999999999999999999999998 88999999999


Q ss_pred             Ccc---------cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|         +|++...   .......+....|++++++|+|+|++++||+++.+
T Consensus       176 G~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  229 (254)
T 1zmt_A          176 NYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSC  229 (254)
T ss_dssp             SSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSC
T ss_pred             CccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999         6654322   11223334556788899999999999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=5.5e-34  Score=216.04  Aligned_cols=186  Identities=18%  Similarity=0.169  Sum_probs=158.4

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC---CCCCCCCHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~n   79 (208)
                      |+.++++++.+++  .+.       |+.|.++++++++++.+.+|++|+||||||....   .++.+.+.++|++++++|
T Consensus        36 r~~~~~~~~~~~~--~~~-------~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N  106 (244)
T 1zmo_A           36 ADAAERQRFESEN--PGT-------IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEAL  106 (244)
T ss_dssp             GSHHHHHHHHHHS--TTE-------EECCCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHh--CCC-------cccCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHH
Confidence            8888887777666  221       2237788889999999999999999999998877   788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       107 ~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  177 (244)
T 1zmo_A          107 SIFPILLLQSAIAPLRAAG--------GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLS-RDGILLYAIGP  177 (244)
T ss_dssp             THHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CcEEEEECChhhCCCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEee
Confidence            9999999999999998875        69999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCc---cCCCChHHHHHhhhh-hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAG---VSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++.   .... .......+.. ..|++|+++|+|+|++++||+++.+
T Consensus       178 G~v~T~~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~  228 (244)
T 1zmo_A          178 NFFNNPTYFPTSDWE-NNPELRERVDRDVPLGRLGRPDEMGALITFLASRRA  228 (244)
T ss_dssp             SSBCBTTTBCHHHHH-HCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTT
T ss_pred             CCCcCCccccccccc-chHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999875   2211 1122223334 5788899999999999999999865

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-33  Score=214.85  Aligned_cols=188  Identities=23%  Similarity=0.246  Sum_probs=156.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++. ++    .++.++.+|++|+++++    ++.+.++++|+||||||.....++.+.+.++|+.++++|+.
T Consensus        37 ~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  107 (246)
T 2ag5_A           37 DINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR  107 (246)
T ss_dssp             ESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             ECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence            56666655443 22    26788999999999988    44456789999999999887777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCC-chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.++++++|.|++++        .++||++||..+..+.+ +...|+++|++++.|+++++.|+. ++||+|++|+||
T Consensus       108 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  178 (246)
T 2ag5_A          108 SMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPG  178 (246)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeC
Confidence            99999999999998875        68999999999988877 899999999999999999999998 889999999999


Q ss_pred             cccCCCccCC----CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|++....    .........+....|.+++++|+|+|++++||+|+++
T Consensus       179 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~  229 (246)
T 2ag5_A          179 TVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDES  229 (246)
T ss_dssp             CEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGG
T ss_pred             cCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            9999864321    1112223334455688899999999999999999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=2.4e-33  Score=213.53  Aligned_cols=175  Identities=22%  Similarity=0.291  Sum_probs=148.7

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..+.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|+.++++|+.+++.++++++|.|++++   
T Consensus        61 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~---  137 (253)
T 2nm0_A           61 FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK---  137 (253)
T ss_dssp             SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence            45678999999999999999999999999999999998777788889999999999999999999999999998865   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhh
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  181 (208)
                           .|+||++||..+..+.++...|+++|+++..|+++++.|+. ++||+||+|+||+++|++.... . ......+.
T Consensus       138 -----~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~-~-~~~~~~~~  209 (253)
T 2nm0_A          138 -----KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELG-SRNITFNVVAPGFVDTDMTKVL-T-DEQRANIV  209 (253)
T ss_dssp             -----CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEECSBCC-----------CHHHHH
T ss_pred             -----CCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhhc-C-HHHHHHHH
Confidence                 68999999999998888999999999999999999999998 8999999999999999875432 1 11223344


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ...|.+++++|+|+|++++||+++++
T Consensus       210 ~~~p~~~~~~p~dvA~~i~~l~s~~~  235 (253)
T 2nm0_A          210 SQVPLGRYARPEEIAATVRFLASDDA  235 (253)
T ss_dssp             TTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            55688899999999999999999864

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=9.3e-33  Score=209.11  Aligned_cols=194  Identities=25%  Similarity=0.322  Sum_probs=171.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeE-EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.. +.+|++|.++++++++++.+.++++|+||||||.....++.+.+.++|+.++++|+
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~  112 (245)
T 2ph3_A           33 GQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANL  112 (245)
T ss_dssp             SSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcc
Confidence            68888999988888877777777 99999999999999999999999999999999988777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|++++        .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+++.|+||
T Consensus       113 ~g~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  183 (245)
T 2ph3_A          113 SAVFRTTREAVKLMMKAR--------FGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYA-QRGITVNAVAPG  183 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCSSBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCEEEEEeChhhccCCCCCcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEEE
Confidence            999999999999998765        68999999999888889999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|++.... . ......+....|.+++.+++|+|+++++|+++.
T Consensus       184 ~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  227 (245)
T 2ph3_A          184 FIETEMTERL-P-QEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEK  227 (245)
T ss_dssp             SBCCHHHHTS-C-HHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             eecCcchhhc-C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999865432 2 223334445567788999999999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.8e-33  Score=211.55  Aligned_cols=194  Identities=26%  Similarity=0.364  Sum_probs=150.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+.++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  116 (247)
T 2hq1_A           37 SPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLK  116 (247)
T ss_dssp             CTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHH
T ss_pred             CcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhH
Confidence            46777788888888877778999999999999999999999999999999999999887677778889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+++.++||+
T Consensus       117 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  187 (247)
T 2hq1_A          117 SAYLCTKAVSKIMLKQK--------SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFA-AKGIYCNAVAPGI  187 (247)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECC---------CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcChhhccCCCCCcHhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEEEE
Confidence            99999999999998765        68999999999888889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|++....  +......+....|.+++++++|+|++++||++++
T Consensus       188 v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  230 (247)
T 2hq1_A          188 IKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD  230 (247)
T ss_dssp             BCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             Eeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcc
Confidence            999865432  2233344455667888999999999999999875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-32  Score=216.50  Aligned_cols=157  Identities=25%  Similarity=0.350  Sum_probs=142.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+.+...+.++..+.+|++|++++.++++++.+++|++|+||||||+....++.+.+.++|++++++|+.
T Consensus        41 ~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~  120 (324)
T 3u9l_A           41 GRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVL  120 (324)
T ss_dssp             TTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTH
T ss_pred             ccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhH
Confidence            57788899998888877888999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      |++.++++++|.|++++        .|+||++||..+.. +.++...|+++|+|+++|+++++.|+. ++||+|++|+||
T Consensus       121 g~~~l~~a~lp~m~~~~--------~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~-~~gI~v~~v~PG  191 (324)
T 3u9l_A          121 STQRVNRAALPHMRRQK--------HGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELS-RWGIETSIIVPG  191 (324)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEECC
Confidence            99999999999999876        79999999999885 457788999999999999999999998 899999999999


Q ss_pred             cccCCCc
Q 028508          161 PIKDTAG  167 (208)
Q Consensus       161 ~v~t~~~  167 (208)
                      +++|++.
T Consensus       192 ~v~t~~~  198 (324)
T 3u9l_A          192 AFTSGTN  198 (324)
T ss_dssp             CC-----
T ss_pred             ccccCch
Confidence            9987653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-32  Score=209.73  Aligned_cols=169  Identities=29%  Similarity=0.441  Sum_probs=151.3

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.|++.++++++|.|++++  
T Consensus        69 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--  146 (260)
T 3un1_A           69 DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG--  146 (260)
T ss_dssp             TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--
Confidence            356789999999999999999999999999999999998888888899999999999999999999999999999876  


Q ss_pred             CCCCCCCceEEEeccccccc--cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508          101 QASSSSGGIIINISATLHYT--ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                            .|+||++||..+..  +..+...|+++|+|+++|+++++.|+. ++||+||+|+||+|+|++...     ....
T Consensus       147 ------~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~-----~~~~  214 (260)
T 3un1_A          147 ------SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFS-RSGVRVNAVSPGVIKTPMHPA-----ETHS  214 (260)
T ss_dssp             ------CEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECCBCCTTSCG-----GGHH
T ss_pred             ------CcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEEeecCCCCCCCCH-----HHHH
Confidence                  79999999988764  345668899999999999999999998 899999999999999987532     2334


Q ss_pred             hhhhhhcCCCCCCHHHHHHHHHHhc
Q 028508          179 KATDYMAAYKFGEKWDIAMAALYLA  203 (208)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~L~  203 (208)
                      ......|++|+++|+|+|++++||.
T Consensus       215 ~~~~~~p~~r~~~~~dva~av~~L~  239 (260)
T 3un1_A          215 TLAGLHPVGRMGEIRDVVDAVLYLE  239 (260)
T ss_dssp             HHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHhccCCCCCCcCHHHHHHHHHHhc
Confidence            4566779999999999999999993

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=4.4e-34  Score=216.58  Aligned_cols=174  Identities=19%  Similarity=0.242  Sum_probs=152.6

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|+++++++++.+.  ++++|++|||||.....++.+.+.++|++++++|+.+++.+++++.|.|.+    
T Consensus        45 ~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~----  118 (244)
T 4e4y_A           45 NLKFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV----  118 (244)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE----
T ss_pred             cceEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc----
Confidence            45678999999999999996554  689999999999988888899999999999999999999999999998865    


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC--------
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------  172 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--------  172 (208)
                            .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+|+|++......        
T Consensus       119 ------~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  191 (244)
T 4e4y_A          119 ------GASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGI  191 (244)
T ss_dssp             ------EEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTC
T ss_pred             ------CcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCeEEEEEecCccCchhhHHHHHhhhhhcCC
Confidence                  47899999999999999999999999999999999999998 899999999999999986543211        


Q ss_pred             -hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          173 -PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       173 -~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                       ..+.........|++|+++|+|+|++++||+|+.+
T Consensus       192 ~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  227 (244)
T 4e4y_A          192 SFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKS  227 (244)
T ss_dssp             CHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCcc
Confidence             11234455667889999999999999999999865

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.3e-32  Score=208.69  Aligned_cols=194  Identities=27%  Similarity=0.357  Sum_probs=170.4

Q ss_pred             CCcHHHHHHHHHHHHh-cCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++.. .+.++.++.+|++|+++++++++++.+.++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~  117 (248)
T 2pnf_A           38 GTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNL  117 (248)
T ss_dssp             ESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhh
Confidence            6888888888888865 466788999999999999999999999999999999999988777777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|++++        .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+++.++||
T Consensus       118 ~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg  188 (248)
T 2pnf_A          118 TGTFLVTQNSLRKMIKQR--------WGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELA-PRNVLVNAVAPG  188 (248)
T ss_dssp             HHHHHHHHHHCHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEec
Confidence            999999999999998765        68999999998888888999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|++....  .......+....|.+++.+++|+|++++||+++.
T Consensus       189 ~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (248)
T 2pnf_A          189 FIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSEL  232 (248)
T ss_dssp             SBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             eecCchhhhc--cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCch
Confidence            9999875432  2223334445567788999999999999999875

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.4e-33  Score=212.48  Aligned_cols=177  Identities=22%  Similarity=0.303  Sum_probs=155.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++  
T Consensus        47 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--  124 (264)
T 2dtx_A           47 KYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR--  124 (264)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--
Confidence            456789999999999999999999999999999999988777888899999999999999999999999999998765  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC------ChH
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APE  174 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~------~~~  174 (208)
                            .++||++||..+..+.++...|+++|++++.|+++++.|+. ++ |+||+|+||+++|++.....      .+.
T Consensus       125 ------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~  196 (264)
T 2dtx_A          125 ------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA-PL-LRCNAVCPATIDTPLVRKAAELEVGSDPM  196 (264)
T ss_dssp             ------SCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHH
T ss_pred             ------CcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHHHHhc-CC-cEEEEEEeCCCcCcchhhhhhcccccCch
Confidence                  68999999999999999999999999999999999999998 77 99999999999998643210      110


Q ss_pred             ---HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          175 ---EIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       175 ---~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                         .....+....|.+++++|+|+|++++||+++.+
T Consensus       197 ~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~  232 (264)
T 2dtx_A          197 RIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREA  232 (264)
T ss_dssp             HHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence               222334455688899999999999999999764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.7e-32  Score=211.69  Aligned_cols=194  Identities=24%  Similarity=0.321  Sum_probs=166.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCC-CCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAE-DLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~-~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+|++|+||||||.... .++. +.+.++|+..+++|
T Consensus        65 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N  144 (279)
T 3ctm_A           65 YNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVD  144 (279)
T ss_dssp             ESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHH
Confidence            566666777777776667788999999999999999999999999999999999998766 5666 78889999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +.+++.+++.+++.|++++        .++||++||..+..+  .++...|+++|++++.|+++++.|+. ++| +|+.|
T Consensus       145 ~~g~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~-~v~~v  214 (279)
T 3ctm_A          145 LNGVYYCSHNIGKIFKKNG--------KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA-PFA-RVNTI  214 (279)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTT-TTC-EEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhc-ccC-CEEEE
Confidence            9999999999999998765        689999999999888  78899999999999999999999998 889 99999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +||+++|++...  ........+....|.+++.+|+|+|++++||+++++
T Consensus       215 ~Pg~v~t~~~~~--~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~  262 (279)
T 3ctm_A          215 SPGYIDTDITDF--ASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNAS  262 (279)
T ss_dssp             EECSBSSTTTSS--CCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGG
T ss_pred             eccCCccccccc--cChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccc
Confidence            999999997632  223333444566788899999999999999999754

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.3e-32  Score=212.48  Aligned_cols=193  Identities=22%  Similarity=0.236  Sum_probs=162.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++.+|++|.++++++++++.+++|++|+||||||.....++.+.+.++|++++++|+.
T Consensus        36 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  112 (281)
T 3m1a_A           36 ARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVF  112 (281)
T ss_dssp             ESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHH
Confidence            57777777665543   557899999999999999999999999999999999999987788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.+++.++|.|++++        .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+|+.|+||+
T Consensus       113 g~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (281)
T 3m1a_A          113 GPARLTRALLPQMRERG--------SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVA-PFGIKVLIVEPGA  183 (281)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcCccccCCCCCchHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCc
Confidence            99999999999998876        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCC------ChH-----HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKL------APE-----EIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~------~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|++.....      ...     ..........+.+++.+++|+|++++++++++
T Consensus       184 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          184 FRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             BCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSS
T ss_pred             cccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCC
Confidence            9998754321      111     11122334456778999999999999998765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.1e-32  Score=209.76  Aligned_cols=193  Identities=27%  Similarity=0.337  Sum_probs=166.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCe-eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++   +.++ ..+.+|++|.++++++++++.+ ++++|+||||||.....++.+.+.++|+.++++|+
T Consensus        42 ~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  117 (254)
T 2wsb_A           42 DREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNV  117 (254)
T ss_dssp             ESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHh
Confidence            68888888877776   3456 7899999999999999999988 89999999999988777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch--hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .+++.+++.++|.|++++        .++||++||..+..+.+..  ..|+++|++++.++++++.|+. ++||+++.|+
T Consensus       118 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~  188 (254)
T 2wsb_A          118 DGMFWASRAFGRAMVARG--------AGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWA-GRGVRVNALA  188 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEecchhccCCCCCcchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEE
Confidence            999999999999998876        6899999999988887777  8999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++.............+....|.+++.+|+|+|++++||+++.+
T Consensus       189 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  237 (254)
T 2wsb_A          189 PGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAA  237 (254)
T ss_dssp             ECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             ecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            9999998654221112333344455678889999999999999998753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2.7e-32  Score=212.66  Aligned_cols=198  Identities=31%  Similarity=0.498  Sum_probs=168.3

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++... +.++.++.+|++|.++++++++.+.+.+|++|+||||||.....++.+.+.++|+..+++|+
T Consensus        57 ~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  136 (302)
T 1w6u_A           57 SRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVL  136 (302)
T ss_dssp             ESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHh
Confidence            68888888888888765 67899999999999999999999999999999999999987767777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.+.+.+.++..       .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+.|+||
T Consensus       137 ~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg  208 (302)
T 1w6u_A          137 NGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPG  208 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhcC-------CCEEEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeec
Confidence            9999999999999974321       58999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCC-ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +++|+...... .............|.+++++++|+|++++||+++.+
T Consensus       209 ~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~  256 (302)
T 1w6u_A          209 PIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYA  256 (302)
T ss_dssp             CBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             cCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcc
Confidence            99988433322 211222344456788899999999999999998753

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.7e-32  Score=211.86  Aligned_cols=197  Identities=22%  Similarity=0.232  Sum_probs=165.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeC-CCCCCCCCC-----CCCCHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA-AAGNFLVPA-----EDLSPNGFRT   74 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~-ag~~~~~~~-----~~~~~~~~~~   74 (208)
                      ++|+.++++++.+++   +.++.++++|++|.++++++++++ ++++++|++||| +|......+     .+.+.++|++
T Consensus        60 ~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~  135 (281)
T 3ppi_A           60 ADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTK  135 (281)
T ss_dssp             EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHH
T ss_pred             EeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHH
Confidence            368888888888887   567999999999999999999999 888999999999 555443333     3678899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                      .+++|+.+++.+++.+.+.+......  ....+|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|
T Consensus       136 ~~~~n~~~~~~l~~~~~~~~~~~~~~--~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v  212 (281)
T 3ppi_A          136 TIDLYLNGTYNVARLVAASIAAAEPR--ENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS-SAGIRV  212 (281)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHTSCCC--TTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEE
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhhccc--ccCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEE
Confidence            99999999999999999999863210  011268999999999999999999999999999999999999998 889999


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhcC-CCCCCHHHHHHHHHHhcCCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++|+||+|+|++....  .......+....|. +++.+|+|+|++++||+++.
T Consensus       213 ~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~  263 (281)
T 3ppi_A          213 NTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNG  263 (281)
T ss_dssp             EEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHCS
T ss_pred             EEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcCC
Confidence            9999999999876543  23344556666777 88999999999999999863

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=4.7e-32  Score=206.00  Aligned_cols=196  Identities=24%  Similarity=0.291  Sum_probs=167.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++... .++.++.+|++|++++.++++.+.+.++++|+||||||.....++.+.+.++|++++++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  115 (251)
T 1zk4_A           37 GRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLD  115 (251)
T ss_dssp             ESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhH
Confidence            68888888887777543 46889999999999999999999999999999999999887777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEEeec
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAP  159 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~v~p  159 (208)
                      +++.+++.++|.|++++        . ++||++||..+..+.++...|+++|++++.|+++++.|+. .++||+++.|+|
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~P  187 (251)
T 1zk4_A          116 GVFFGTRLGIQRMKNKG--------LGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP  187 (251)
T ss_dssp             HHHHHHHHHHHHHTTSS--------SCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcC--------CCCEEEEeCCchhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEee
Confidence            99999999999998764        4 7999999999999999999999999999999999999873 156999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++.... .............|.+++.+|+|+|++++||+++.+
T Consensus       188 g~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  234 (251)
T 1zk4_A          188 GYIKTPLVDDL-PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNES  234 (251)
T ss_dssp             CCBCCHHHHTS-TTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcCcchhhhhc-CchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999876542 222222223345677889999999999999998753

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.5e-33  Score=222.07  Aligned_cols=184  Identities=11%  Similarity=0.018  Sum_probs=153.9

Q ss_pred             HHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-------------CCCCC-------------
Q 028508           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-------------FLVPA-------------   64 (208)
Q Consensus        11 ~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-------------~~~~~-------------   64 (208)
                      +.+++.+.+.++..+.+|++|+++++++++++.+++|+||+||||||..             ..+++             
T Consensus       100 ~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~  179 (405)
T 3zu3_A          100 FHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDK  179 (405)
T ss_dssp             HHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTT
T ss_pred             HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccc
Confidence            3445666677899999999999999999999999999999999999985             22344             


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch--hHHHHhHH
Q 028508           65 --------EDLSPNGFRTVIEIDSVGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKA  133 (208)
Q Consensus        65 --------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sKa  133 (208)
                              .+.+.++|++++++|..+.+ .+++.+.+......        +|+||++||+.+..+.+.+  ..|+++|+
T Consensus       180 ~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~--------gG~IVniSSi~~~~~~p~~~~~aY~AaKa  251 (405)
T 3zu3_A          180 EVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAE--------GAQTTAFTYLGEKITHDIYWNGSIGAAKK  251 (405)
T ss_dssp             TEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHHHH
T ss_pred             cccccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhC--------CcEEEEEeCchhhCcCCCccchHHHHHHH
Confidence                    67899999999999999998 78888776433333        5899999999999998887  99999999


Q ss_pred             HHHHHHHHHHHHhcCCC-CeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          134 AVDSITRSLALEWGTDY-AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       134 a~~~~~~~la~e~~~~~-gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+.+|+++|+.|++ ++ |||||+|+||+|.|++.............  ...+++|.+++||+++++.||+|+
T Consensus       252 al~~ltrsLA~Ela-~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~--l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          252 DLDQKVLAIRESLA-AHGGGDARVSVLKAVVSQASSAIPMMPLYLSL--LFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHHHHHHHHHHHHH-TTTSCEEEEEECCCCCCHHHHTSTTHHHHHHH--HHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC-cccCeEEEEEEeCCCcCchhhcCCCCcHHHHH--HHHHHhcCCCcHHHHHHHHHHHhc
Confidence            99999999999999 99 99999999999999876554332222222  222688999999999999999986

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.8e-32  Score=209.81  Aligned_cols=196  Identities=25%  Similarity=0.309  Sum_probs=163.3

Q ss_pred             CCcHHHHHHHHHHHHhcC-------CCeeEEEcCCCCHHHHHHHHHHHHHHhCCc-cEEEeCCCCCCCCCCCCCCHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLG-------IPAIGLEGDVRKREDAVRVVESTINHFGKL-DILVNAAAGNFLVPAEDLSPNGFR   73 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i-d~lv~~ag~~~~~~~~~~~~~~~~   73 (208)
                      +|+.++++++.+++...+       .++.++.+|++|.++++++++.+.+.+|++ |+||||||.....++.+.+.++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~  117 (264)
T 2pd6_A           38 DLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWD  117 (264)
T ss_dssp             ESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHH
T ss_pred             eCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHH
Confidence            688888888877776554       578899999999999999999999999999 999999998877777888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      .++++|+.+++.+++++.|.|.+++.       .++||++||..+..+.++...|+++|++++.|++.++.|+. ++||+
T Consensus       118 ~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~  189 (264)
T 2pd6_A          118 KVIAVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELG-RHGIR  189 (264)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEE
T ss_pred             HHHhhccHHHHHHHHHHHHHHHhcCC-------CceEEEECChhhccCCCCChhhHHHHHHHHHHHHHHHHHhh-hcCeE
Confidence            99999999999999999999987531       37899999999999999999999999999999999999998 88999


Q ss_pred             EEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++.|+||+++|++....  .......+....|.+++++++|+|++++||+++.+
T Consensus       190 v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  241 (264)
T 2pd6_A          190 CNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDS  241 (264)
T ss_dssp             EEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             EEEEeeecccccchhhc--CHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99999999999875432  11223334455677889999999999999998753

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-32  Score=212.19  Aligned_cols=196  Identities=32%  Similarity=0.514  Sum_probs=168.2

Q ss_pred             CCcHHHHHHHHHHHHh-----cCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~   76 (208)
                      +|+.++++++.+++..     .+.++.++.+|++|+++++++++.+.+.+|++|+||||||.....++.+.+.++|+.++
T Consensus        49 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~  128 (303)
T 1yxm_A           49 SRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVL  128 (303)
T ss_dssp             ESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHH
Confidence            6888899999888876     35678999999999999999999999999999999999998766677788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+++.+++++.|.+.++.        .++||++||.. ..+.++...|+++|+++.+++++++.|+. ++||+|++
T Consensus       129 ~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~  198 (303)
T 1yxm_A          129 ETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINC  198 (303)
T ss_dssp             HHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEE
T ss_pred             HHHhHHHHHHHHHHHHHHHHhc--------CCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEE
Confidence            9999999999999999766544        68999999998 77888899999999999999999999998 88999999


Q ss_pred             eecCcccCCCccCCCC--hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+++|++......  ............|.+++++|+|+|++++||+++.+
T Consensus       199 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~  251 (303)
T 1yxm_A          199 VAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  251 (303)
T ss_dssp             EEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             EecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccc
Confidence            9999999985322211  12222334455688899999999999999998754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.6e-33  Score=223.81  Aligned_cols=185  Identities=14%  Similarity=0.035  Sum_probs=153.6

Q ss_pred             HHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCC-------------CCCCC------------
Q 028508           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGN-------------FLVPA------------   64 (208)
Q Consensus        11 ~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~-------------~~~~~------------   64 (208)
                      +.+++++.|.++..+.+|++|+++++++++++.+++ |+||+||||||..             ...++            
T Consensus       114 ~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~  193 (422)
T 3s8m_A          114 FDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTN  193 (422)
T ss_dssp             HHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETT
T ss_pred             HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccc
Confidence            446666778889999999999999999999999999 9999999999973             22333            


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch--hHHHHhH
Q 028508           65 ---------EDLSPNGFRTVIEIDSVGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAK  132 (208)
Q Consensus        65 ---------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sK  132 (208)
                               .+.+.++|+.++++|..+.+ .+++.+.+.+..++        +|+||++||..+..+.+.+  ..|+++|
T Consensus       194 ~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~--------gG~IVniSSi~g~~~~p~~~~~aY~ASK  265 (422)
T 3s8m_A          194 KDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLAD--------GARSVAFSYIGTEITWPIYWHGALGKAK  265 (422)
T ss_dssp             TTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE--------EEEEEEEEECCCGGGHHHHTSHHHHHHH
T ss_pred             cccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhC--------CCEEEEEeCchhhccCCCccchHHHHHH
Confidence                     36799999999999999987 77888776543333        5899999999999988877  9999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       133 aa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +|+.+|+++|+.|++ ++|||||+|+||+|.|++..........  ......|++|.++|||+++++.||+|+.
T Consensus       266 aAl~~lTrsLA~Ela-~~GIRVNaVaPG~i~T~~~~~ip~~~~~--~~~~~~~m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          266 VDLDRTAQRLNARLA-KHGGGANVAVLKSVVTQASAAIPVMPLY--ISMVYKIMKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             HHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTHHHHH--HHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhC-ccCEEEEEEEcCCCcChhhhcCCCChHH--HHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence            999999999999999 9999999999999999976544322221  1122347899999999999999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.2e-32  Score=209.34  Aligned_cols=196  Identities=19%  Similarity=0.244  Sum_probs=159.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC------CCCHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGFRTV   75 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~------~~~~~~~~~~   75 (208)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||.....++.      +.+.++|+..
T Consensus        43 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  119 (265)
T 2o23_A           43 DLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV  119 (265)
T ss_dssp             ECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHH
T ss_pred             eCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHH
Confidence            57777777777766   55788999999999999999999999999999999999987654443      3688999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.+++.+.|.|+++...  .....++||++||..+..+.++...|+++|++++.|+++++.|+. ++||+|+
T Consensus       120 ~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~  196 (265)
T 2o23_A          120 LDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVM  196 (265)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEE
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcccc--cCCCCcEEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEE
Confidence            9999999999999999999876210  000168999999999999999999999999999999999999998 8899999


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhhhhhcC-CCCCCHHHHHHHHHHhcCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~  205 (208)
                      .|+||+++|++....  +......+....|. +++.+|+|+|+.++||+++
T Consensus       197 ~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  245 (265)
T 2o23_A          197 TIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN  245 (265)
T ss_dssp             EEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             EEEeccccCcccccc--CHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhc
Confidence            999999999875432  11222233445677 7899999999999999864

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-32  Score=208.16  Aligned_cols=196  Identities=20%  Similarity=0.330  Sum_probs=165.0

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++.++..+++.+. +.++.++.+|++|.++++++++++.+.++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        45 ~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  124 (265)
T 1h5q_A           45 YRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNV  124 (265)
T ss_dssp             ESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             eCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhh
Confidence            46555555555666432 66788999999999999999999999999999999999988777778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc-------hhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-------QIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-------~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      .+++.+++++.|.|.+++.       .++||++||..+..+.+.       ...|+++|++++.|+++++.|+. ++||+
T Consensus       125 ~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~  196 (265)
T 1h5q_A          125 FGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIR  196 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEE
T ss_pred             HhHHHHHHHHHHHHHhcCC-------CceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHH-hcCcE
Confidence            9999999999999987541       389999999988766543       78899999999999999999998 88999


Q ss_pred             EEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+.|+||+++|++....  .......+....|.+++.+|+|+|++++||+++++
T Consensus       197 v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  248 (265)
T 1h5q_A          197 VNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA  248 (265)
T ss_dssp             EEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             EEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHHhhccCch
Confidence            99999999999876543  22233444556788899999999999999998754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1e-32  Score=207.22  Aligned_cols=180  Identities=16%  Similarity=0.152  Sum_probs=149.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++   +.++.++.+|+++.++++++++++.+   .+|++|||||.....++.+.+.++|++++++|+
T Consensus        31 ~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  104 (230)
T 3guy_A           31 TGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNL  104 (230)
T ss_dssp             EESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHH
Confidence            368888888877766   56788999999999999999887654   349999999998888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|.+++         ++||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+|++|+||
T Consensus       105 ~g~~~l~~~~~~~~~~~~---------~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  174 (230)
T 3guy_A          105 SSAINVLRELVKRYKDQP---------VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELK-GKPMKIIAVYPG  174 (230)
T ss_dssp             HHHHHHHHHHHHHHTTSC---------CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCC---------CeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHHH-hcCeEEEEEECC
Confidence            999999999999998763         5899999999999999999999999999999999999998 899999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +++|++....          ....+.+++.+|+|+|++++||++++
T Consensus       175 ~v~t~~~~~~----------~~~~~~~~~~~~~dvA~~i~~l~~~~  210 (230)
T 3guy_A          175 GMATEFWETS----------GKSLDTSSFMSAEDAALMIHGALANI  210 (230)
T ss_dssp             CC--------------------------CCCHHHHHHHHHHHCCEE
T ss_pred             cccChHHHhc----------CCCCCcccCCCHHHHHHHHHHHHhCc
Confidence            9999865432          22345678999999999999998843

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=5.4e-32  Score=212.56  Aligned_cols=202  Identities=20%  Similarity=0.216  Sum_probs=159.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCC--CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...+.  ++.++.+|++|++++.++++.+.+.+|++|+||||||+....++.+.+.++|+.++++
T Consensus        38 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~  117 (319)
T 3ioy_A           38 ADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGV  117 (319)
T ss_dssp             EESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence            36899999999999987665  7889999999999999999999999999999999999988788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.|++.+++.++|.|.++...  .....|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+|++|+
T Consensus       118 N~~g~~~l~~~~~~~~~~~~~~--~~~~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~-~~gi~v~~v~  194 (319)
T 3ioy_A          118 NLHGVVNGVTTFVPRMVERVKA--GEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLC  194 (319)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHT--TSCCCCEEEEECCGGGTCCCSSSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEC
T ss_pred             HhHHHHHHHHHHHHHHHHhhhc--cCCCCcEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEE
Confidence            9999999999999999875000  000168999999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHH-HHh-------hhhh-hcC-CCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEI-RSK-------ATDY-MAA-YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~-~~~-------~~~~-~~~-~~~~~~~dva~~~~~L~s~  205 (208)
                      ||+|+|++.......... ...       .... .+. ....+|+++|+.++.++..
T Consensus       195 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~  251 (319)
T 3ioy_A          195 PGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKA  251 (319)
T ss_dssp             CCCBC-----------------------------CCGGGSSBCHHHHHHHHHHHHHT
T ss_pred             cCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHc
Confidence            999999876543211110 000       0000 011 1126899999999988654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=4.9e-31  Score=203.20  Aligned_cols=196  Identities=23%  Similarity=0.244  Sum_probs=165.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++.+++.+++... .++.++.+|++|+++++++++++.++++++|+||||||....  .++.+.+.++|+..+++|
T Consensus        47 ~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n  125 (278)
T 2bgk_A           47 DIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN  125 (278)
T ss_dssp             ESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHH
T ss_pred             cCChhHHHHHHHHhCCC-CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHh
Confidence            57777777777776432 368899999999999999999999999999999999998653  567788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCC-chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.+++.+.|.|++++        .++||++||..+..+.+ +...|+++|++++.+++.++.|+. ++||+++.|+
T Consensus       126 ~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~  196 (278)
T 2bgk_A          126 VYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVS  196 (278)
T ss_dssp             THHHHHHHHHHHHHHGGGT--------CEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhhcC--------CCeEEEEeeccccCCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCcEEEEEE
Confidence            9999999999999998765        68999999999988887 889999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCC-hHHHHHhhhhh--hcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          159 PGPIKDTAGVSKLA-PEEIRSKATDY--MAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       159 pG~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ||+++|++...... .......+...  .+.+++.+++|+|++++||+++.+
T Consensus       197 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  248 (278)
T 2bgk_A          197 PYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES  248 (278)
T ss_dssp             ESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGG
T ss_pred             eceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCccc
Confidence            99999997654322 12222222222  245789999999999999998753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.9e-32  Score=230.77  Aligned_cols=181  Identities=24%  Similarity=0.322  Sum_probs=154.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.+.+.++   .+|++|.++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+.
T Consensus        48 gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~  124 (604)
T 2et6_A           48 GGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLN  124 (604)
T ss_dssp             ----CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH
T ss_pred             ccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            355578888999998766543   36888888899999999999999999999999988788999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.++|+++|+|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+|| 
T Consensus       125 g~~~~~~a~~p~m~~~~--------~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~Pg-  194 (604)
T 2et6_A          125 GAFAVTKAAWPYFQKQK--------YGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGA-KYNIKANAIAPL-  194 (604)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-
T ss_pred             HHHHHHHHHHHHHHHcC--------CCEEEEECCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEccC-
Confidence            99999999999999876        79999999999999999999999999999999999999999 999999999998 


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +.|++......+ ..          .+..+|+|+|..++||+|++
T Consensus       195 ~~T~m~~~~~~~-~~----------~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          195 ARSRMTESIMPP-PM----------LEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             CCCHHHHTTSCH-HH----------HTTCSHHHHHHHHHHHTSSS
T ss_pred             CcCccccccCCh-hh----------hccCCHHHHHHHHHHHhCCc
Confidence            577654322111 11          12468999999999999986

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=3.3e-32  Score=222.45  Aligned_cols=175  Identities=22%  Similarity=0.258  Sum_probs=151.8

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      +.++.||++|.++++++++++.+++|+ +|+||||||+.....+.+.+.++|+.++++|+.|++.+++.+.+.|+.+.  
T Consensus       261 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~--  338 (454)
T 3u0b_A          261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE--  338 (454)
T ss_dssp             CEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT--
T ss_pred             CeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--
Confidence            567999999999999999999999986 99999999999888888999999999999999999999999999887655  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                            .++||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||+|+||+|+|++......  ......
T Consensus       339 ------~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~  409 (454)
T 3u0b_A          339 ------GGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLA-DKGITINAVAPGFIETKMTEAIPL--ATREVG  409 (454)
T ss_dssp             ------TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECSBCC------------CHHH
T ss_pred             ------CCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEcCcccChhhhhcch--hhHHHH
Confidence                  78999999999999999999999999999999999999998 899999999999999987654321  112233


Q ss_pred             hhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          181 TDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       181 ~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ....++++.++|+|+|++++||+|+.+
T Consensus       410 ~~~~~l~r~g~pedvA~~v~fL~s~~a  436 (454)
T 3u0b_A          410 RRLNSLFQGGQPVDVAELIAYFASPAS  436 (454)
T ss_dssp             HHSBTTSSCBCHHHHHHHHHHHHCGGG
T ss_pred             HhhccccCCCCHHHHHHHHHHHhCCcc
Confidence            345678889999999999999999865

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=4.8e-32  Score=206.61  Aligned_cols=199  Identities=20%  Similarity=0.288  Sum_probs=168.9

Q ss_pred             CCc-HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+ .++++++.+++...+.++.++.+|++|+++++++++++.+++|++|+||||||. ....++.+.+.++|+.++++|
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n  117 (258)
T 3afn_B           38 GRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDAN  117 (258)
T ss_dssp             ESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhc
Confidence            566 778888888888777788999999999999999999999999999999999997 555667788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.+++.++|.|.+++..   ....++||++||..+.. +.++...|+++|++++.+++.++.|+. ++||+|+.|+
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~  193 (258)
T 3afn_B          118 IRSVVMTTKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHT-KDGVRFNIVS  193 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHHHH---HTSCEEEEEECCTHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHhcccC---CCCCcEEEEecchhhccCCCCCchHHHHHHHHHHHHHHHHHHhhc-ccCeEEEEEe
Confidence            999999999999999754200   00037899999998887 788899999999999999999999998 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ||+++|++....  ............|.+++.+++|+|++++||+++.
T Consensus       194 Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  239 (258)
T 3afn_B          194 PGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHL  239 (258)
T ss_dssp             ECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHH
T ss_pred             CCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcc
Confidence            999999875432  2233344555678888999999999999999864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=6.6e-32  Score=227.51  Aligned_cols=177  Identities=25%  Similarity=0.323  Sum_probs=151.4

Q ss_pred             HHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 028508            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (208)
Q Consensus         8 ~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (208)
                      ++++.+++.+.+.++..+.+|++  ++.+++++++.+++|+||+||||||+....++.+++.++|++++++|+.|++.++
T Consensus       357 ~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~  434 (604)
T 2et6_A          357 ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLS  434 (604)
T ss_dssp             CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            45667777776777788888884  5567889999999999999999999988788999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                      |+++|+|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+||. .|++.
T Consensus       435 ~~~~p~m~~~~--------~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~PG~-~T~m~  504 (604)
T 2et6_A          435 RLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGA-KNNIKVNIVAPHA-ETAMT  504 (604)
T ss_dssp             HHHHHHHHHTT--------CEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC-CCCC-
T ss_pred             HHHHHHHHHcC--------CCEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEcCCC-CCccc
Confidence            99999998876        79999999999999999999999999999999999999999 9999999999995 88764


Q ss_pred             cCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .....+           ...+..+|+|+|+.++||+|+.+
T Consensus       505 ~~~~~~-----------~~~~~~~pe~vA~~v~~L~s~~~  533 (604)
T 2et6_A          505 LSIMRE-----------QDKNLYHADQVAPLLVYLGTDDV  533 (604)
T ss_dssp             -------------------CCSSCGGGTHHHHHHTTSTTC
T ss_pred             cccCch-----------hhccCCCHHHHHHHHHHHhCCcc
Confidence            321111           01235689999999999999876

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-31  Score=205.04  Aligned_cols=195  Identities=24%  Similarity=0.361  Sum_probs=169.3

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R-~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +| +.++++++.+++...+.++.++.+|++|+++++++++++.+.++++|++|||||.....++.+.+.++|+..+++|+
T Consensus        52 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~  131 (274)
T 1ja9_A           52 YGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNT  131 (274)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             cCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHH
Confidence            45 77888888888887777899999999999999999999999999999999999988777777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      .+++.+++++.+.|+ +         +++||++||..+. .+.++...|+++|++++.+++.++.|+. ++||+++.++|
T Consensus       132 ~~~~~l~~~~~~~~~-~---------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~P  200 (274)
T 1ja9_A          132 RGQFFVAQQGLKHCR-R---------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAP  200 (274)
T ss_dssp             HHHHHHHHHHHHHEE-E---------EEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHh-h---------CCEEEEEcChHhccCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEee
Confidence            999999999999886 2         4789999999988 7888999999999999999999999998 88999999999


Q ss_pred             CcccCCCccC-----------CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVS-----------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+++|++...           ..........+....|.+++++++|+|+++++|+++.+
T Consensus       201 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~  259 (274)
T 1ja9_A          201 GGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEES  259 (274)
T ss_dssp             CCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             CcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence            9999986541           11113333445556788899999999999999998753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-31  Score=202.85  Aligned_cols=198  Identities=22%  Similarity=0.226  Sum_probs=163.3

Q ss_pred             CCcHHHHHHHHHHHHhcC--CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++...+  .++.++.+|++|+++++++++++.+.++++|+||||||.....++.+.+.++|+.++++|
T Consensus        63 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N  142 (279)
T 1xg5_A           63 ARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVN  142 (279)
T ss_dssp             ESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             ECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            688889999888888765  457889999999999999999999999999999999998877788888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc--ccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEE
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY--TATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNG  156 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~  156 (208)
                      +.+++.+++.+++.|++++.      ..++||++||..+.  .+.++...|+++|++++.|++.++.|+. .++||+|+.
T Consensus       143 ~~~~~~~~~~~l~~~~~~~~------~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~  216 (279)
T 1xg5_A          143 VLALSICTREAYQSMKERNV------DDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATC  216 (279)
T ss_dssp             THHHHHHHHHHHHHHHHTTC------CSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCC------CCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            99999999999999987641      02799999999887  5778889999999999999999999984 146999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+++|++.........  .......+..++.+++|+|++++||+++++
T Consensus       217 v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          217 ISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             EEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred             EecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHHHHhcCCc
Confidence            9999999986422111110  112233445678899999999999998764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.98  E-value=4.7e-31  Score=198.59  Aligned_cols=180  Identities=26%  Similarity=0.349  Sum_probs=150.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.    ++..+.+|++|.++++++++++.+.++++|++|||||.....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  111 (234)
T 2ehd_A           36 ARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLT  111 (234)
T ss_dssp             ESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTH
T ss_pred             ECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence            577777777666552    6788999999999999999999999999999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|++++        .++||++||..+..+.++...|+++|++++.++++++.|+. ++||+++.|+||+
T Consensus       112 ~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  182 (234)
T 2ehd_A          112 GAFLGIRHAVPALLRRG--------GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLR-EANVRVVNVLPGS  182 (234)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEECC-
T ss_pred             HHHHHHHHHHHHHHhCC--------CcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCC
Confidence            99999999999998865        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++....  +.    .+       .+.+|+|+|++++||+++++
T Consensus       183 v~t~~~~~~--~~----~~-------~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          183 VDTGFAGNT--PG----QA-------WKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             ----------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             CcCCccccc--cc----cc-------CCCCHHHHHHHHHHHhCCCc
Confidence            999864321  00    00       14699999999999998764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.98  E-value=5.2e-31  Score=202.71  Aligned_cols=185  Identities=15%  Similarity=0.121  Sum_probs=163.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+.++.++.+|++|.++++++++++.+.++++|+||||||.....++.+.+.++|+.++++|+.
T Consensus        62 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  141 (272)
T 1yb1_A           62 DINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL  141 (272)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTH
T ss_pred             EcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhH
Confidence            68888899999998887778999999999999999999999999999999999999887777777889999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc--CCCCeEEEEeec
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAP  159 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~gi~v~~v~p  159 (208)
                      +++.+++.++|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+.  .++||+|++|+|
T Consensus       142 g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~P  213 (272)
T 1yb1_A          142 AHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP  213 (272)
T ss_dssp             HHHHHHHHHHHHHHHTT--------CEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence            99999999999998865        68999999999999888999999999999999999999984  145899999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+++|++...            ...+..++.+|+|+|+.+++++.+.
T Consensus       214 g~v~t~~~~~------------~~~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          214 NFVNTGFIKN------------PSTSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             THHHHCSTTC------------THHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             CcccCCcccc------------ccccccCCCCHHHHHHHHHHHHHcC
Confidence            9999987431            1123467899999999999998654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.98  E-value=3.3e-31  Score=200.59  Aligned_cols=190  Identities=25%  Similarity=0.293  Sum_probs=158.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++.    ....+.+|++|+++++++++    .++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  109 (244)
T 3d3w_A           38 SRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLR  109 (244)
T ss_dssp             ESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhH
Confidence            577777777665542    35667999999999988876    4689999999999887777778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|.+++.       .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+|+.|+||+
T Consensus       110 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~  181 (244)
T 3d3w_A          110 AVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTV  181 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCC-------CcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEecc
Confidence            999999999999987531       38899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.............+....|.+++.+++|+|++++||+++.+
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (244)
T 3d3w_A          182 VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS  227 (244)
T ss_dssp             BTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9998754322222222334456788899999999999999998753

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.98  E-value=1.8e-32  Score=213.38  Aligned_cols=165  Identities=25%  Similarity=0.236  Sum_probs=142.6

Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 028508           32 REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  109 (208)
Q Consensus        32 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  109 (208)
                      +++++++++++.+++|++|+||||||...  ..++.+.+.++|++++++|+.+++.++++++|.|.+          +|+
T Consensus       103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~----------~g~  172 (297)
T 1d7o_A          103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP----------GGA  172 (297)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc----------Cce
Confidence            67899999999999999999999999754  466778899999999999999999999999999864          478


Q ss_pred             EEEeccccccccCCch-hHHHHhHHHHHHHHHHHHHHhcCC-CCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCC
Q 028508          110 IINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY  187 (208)
Q Consensus       110 iv~iss~~~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  187 (208)
                      ||++||..+..+.+++ ..|+++|+|+.+|+++++.|+. + +||+||+|+||+|+|++..................|++
T Consensus       173 iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  251 (297)
T 1d7o_A          173 SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQ  251 (297)
T ss_dssp             EEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSC
T ss_pred             EEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhC-cccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCC
Confidence            9999999999888887 6899999999999999999997 6 79999999999999997654222233334444567889


Q ss_pred             CCCCHHHHHHHHHHhcCCCC
Q 028508          188 KFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       188 ~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++++|+|+|++++||+|+.+
T Consensus       252 r~~~pedvA~~v~~l~s~~~  271 (297)
T 1d7o_A          252 KTLTADEVGNAAAFLVSPLA  271 (297)
T ss_dssp             CCBCHHHHHHHHHHHTSGGG
T ss_pred             CCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.98  E-value=3.5e-31  Score=198.02  Aligned_cols=180  Identities=24%  Similarity=0.259  Sum_probs=153.4

Q ss_pred             HHHHHHHHhcCCCeeEEE----cCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLE----GDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~----~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      ..+++.|.+.|.++....    +|++|+++++++++++    |++|++|||||.. ...++.+.+.++|++++++|+.++
T Consensus        20 ~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~   95 (223)
T 3uce_A           20 AELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGA   95 (223)
T ss_dssp             HHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeH
Confidence            456666766665554443    8999999999988754    8999999999987 457888999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+++++.|.|++          +|+||++||..+..+.++...|+++|+++++|+++++.|+. +  ||||+|+||+++
T Consensus        96 ~~~~~~~~~~~~~----------~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~--i~vn~v~PG~v~  162 (223)
T 3uce_A           96 VLAAKHGARYLKQ----------GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELA-P--IRVNAISPGLTK  162 (223)
T ss_dssp             HHHHHHHGGGEEE----------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-T--SEEEEEEECSBC
T ss_pred             HHHHHHHHhhccC----------CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhc-C--cEEEEEEeCCCc
Confidence            9999999998865          58899999999999999999999999999999999999997 6  999999999999


Q ss_pred             CCCccCCCCh--HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          164 DTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       164 t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |++.......  ...........|.+|+.+|+|+|++++||+++
T Consensus       163 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~  206 (223)
T 3uce_A          163 TEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN  206 (223)
T ss_dssp             SGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC
T ss_pred             chhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC
Confidence            9976554322  22334566778999999999999999999974

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.98  E-value=3.5e-31  Score=207.80  Aligned_cols=181  Identities=20%  Similarity=0.247  Sum_probs=157.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++...+..   +.+|+++.++++++++++.+.+|++|+||||||+....++.+.+.++|+.++++|+.
T Consensus        49 ~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~  125 (319)
T 1gz6_A           49 GKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR  125 (319)
T ss_dssp             BCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            57888999999998876543   358999999999999999999999999999999987777778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.++++++|.|++++        .++||++||..+..+.+++..|+++|+++..|++.++.|+. ++||+||+|+||+
T Consensus       126 g~~~l~~~~~~~m~~~~--------~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~vn~v~PG~  196 (319)
T 1gz6_A          126 GSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNA  196 (319)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHcC--------CCEEEEECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEeCCC
Confidence            99999999999998876        68999999999988889999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      + |++...... ....          +..+|+|+|+.++||+++.
T Consensus       197 ~-t~~~~~~~~-~~~~----------~~~~p~dvA~~~~~l~s~~  229 (319)
T 1gz6_A          197 G-SRMTETVMP-EDLV----------EALKPEYVAPLVLWLCHES  229 (319)
T ss_dssp             C-STTTGGGSC-HHHH----------HHSCGGGTHHHHHHHTSTT
T ss_pred             c-cccccccCC-hhhh----------ccCCHHHHHHHHHHHhCch
Confidence            8 665432211 1111          1358999999999999874

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.97  E-value=1.6e-32  Score=215.61  Aligned_cols=165  Identities=27%  Similarity=0.254  Sum_probs=113.3

Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 028508           32 REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  109 (208)
Q Consensus        32 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  109 (208)
                      +++++++++++.+++|++|+||||||+..  ..++.+.+.++|+.++++|+.+++.++++++|+|.+          +|+
T Consensus       117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~----------~g~  186 (319)
T 2ptg_A          117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE----------GGS  186 (319)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc----------Cce
Confidence            45899999999999999999999999763  467788999999999999999999999999999864          488


Q ss_pred             EEEeccccccccCCch-hHHHHhHHHHHHHHHHHHHHhcCC-CCeEEEEeecCcccCCCccCCCC--hH----HHHHhhh
Q 028508          110 IINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLA--PE----EIRSKAT  181 (208)
Q Consensus       110 iv~iss~~~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~--~~----~~~~~~~  181 (208)
                      ||++||..+..+.+++ ..|+++|+|+.+|+++|+.|+. + +||+||+|+||+|+|++......  ..    .....+.
T Consensus       187 Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  265 (319)
T 2ptg_A          187 ALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAG-RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSE  265 (319)
T ss_dssp             EEEEEECC------------------THHHHHHHHHHHH-HHHCCEEEEEEECCCC------------------------
T ss_pred             EEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHh
Confidence            9999999999888887 6899999999999999999997 6 79999999999999987543211  00    1111223


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ...|++|+++|+|+|++++||+|+.+
T Consensus       266 ~~~p~~r~~~peevA~~v~~L~s~~~  291 (319)
T 2ptg_A          266 ANAPLQKELESDDVGRAALFLLSPLA  291 (319)
T ss_dssp             -------CCCHHHHHHHHHHHTSGGG
T ss_pred             ccCCCCCCCCHHHHHHHHHHHhCccc
Confidence            45688899999999999999999864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.97  E-value=3.2e-32  Score=213.60  Aligned_cols=165  Identities=24%  Similarity=0.230  Sum_probs=140.7

Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 028508           32 REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  109 (208)
Q Consensus        32 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  109 (208)
                      +++++++++++.+++|++|+||||||+..  ..++.+.+.++|+.++++|+.+++.++++++|.|.+          +|+
T Consensus       104 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~  173 (315)
T 2o2s_A          104 GYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE----------GGS  173 (315)
T ss_dssp             CCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE----------EEE
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc----------CCE
Confidence            66899999999999999999999999763  467778899999999999999999999999998864          488


Q ss_pred             EEEeccccccccCCch-hHHHHhHHHHHHHHHHHHHHhcCC-CCeEEEEeecCcccCCCccCCCC--h----HHHHHhhh
Q 028508          110 IINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLA--P----EEIRSKAT  181 (208)
Q Consensus       110 iv~iss~~~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~--~----~~~~~~~~  181 (208)
                      ||++||..+..+.+++ ..|+++|+|+.+|+++++.|+. + +||+||+|+||+|+|++......  .    ......+.
T Consensus       174 Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  252 (315)
T 2o2s_A          174 AVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAG-QKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSY  252 (315)
T ss_dssp             EEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHH
T ss_pred             EEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEEecccccchhhhhccccccchhHHHHHHHHh
Confidence            9999999999888887 5899999999999999999997 6 79999999999999986432210  0    11222234


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ...|++|+++|+|+|++++||+|+.+
T Consensus       253 ~~~p~~r~~~pedvA~~v~~L~s~~~  278 (315)
T 2o2s_A          253 NNAPLRRDLHSDDVGGAALFLLSPLA  278 (315)
T ss_dssp             HHSSSCCCCCHHHHHHHHHHHTSGGG
T ss_pred             ccCCCCCCCCHHHHHHHHHHHhCchh
Confidence            55789999999999999999999764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.97  E-value=2.5e-31  Score=209.42  Aligned_cols=176  Identities=20%  Similarity=0.198  Sum_probs=143.8

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.++++++++++.  +|++|+||||||.....++.+.+.++|++++++|+.+++.+++.++|.|++++
T Consensus        56 ~~~~~~~~~Dv~d~~~v~~~~~~~~--~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~  133 (327)
T 1jtv_A           56 PGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG  133 (327)
T ss_dssp             TTSEEEEECCTTCHHHHHHHHHTCT--TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHh--cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            3578899999999999999999883  58999999999987767778889999999999999999999999999998765


Q ss_pred             CCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChH----
Q 028508           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----  174 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~----  174 (208)
                              .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+|++|+||+|+|++........    
T Consensus       134 --------~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~  204 (327)
T 1jtv_A          134 --------SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVL  204 (327)
T ss_dssp             --------CEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHH
T ss_pred             --------CCEEEEECCcccccCCCCChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCcccChHHhhhhhcchhhh
Confidence                    69999999999999999999999999999999999999998 88999999999999999765422110    


Q ss_pred             -----HHHH---hhhh--hhcCCCC-CCHHHHHHHHHHhcCC
Q 028508          175 -----EIRS---KATD--YMAAYKF-GEKWDIAMAALYLASD  205 (208)
Q Consensus       175 -----~~~~---~~~~--~~~~~~~-~~~~dva~~~~~L~s~  205 (208)
                           ....   .+..  ..++++. .+|+|+|+.++||+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~  246 (327)
T 1jtv_A          205 DRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRA  246 (327)
T ss_dssp             HTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcC
Confidence                 0000   1111  1123343 4899999999999875

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.97  E-value=2.3e-30  Score=195.92  Aligned_cols=190  Identities=23%  Similarity=0.281  Sum_probs=158.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++    ..+..+.+|++|+++++++++    .++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        38 ~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  109 (244)
T 1cyd_A           38 TRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR  109 (244)
T ss_dssp             ESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhH
Confidence            57777776665543    235667999999999988876    5678999999999887777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|.+++.       .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+++.++||+
T Consensus       110 g~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~  181 (244)
T 1cyd_A          110 SVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTV  181 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCC-------CeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence            999999999999987531       37899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++.........+...+....|.+++.+++|+|+++++|+++.+
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1cyd_A          182 VLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS  227 (244)
T ss_dssp             BTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchh
Confidence            9998654222223333445556788899999999999999998754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.5e-30  Score=199.53  Aligned_cols=191  Identities=26%  Similarity=0.306  Sum_probs=154.2

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++++++.+++...  +.++.++.+|++|+++++++++.+.+++|++|+||||||...        .++|++.+++|
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~--------~~~~~~~~~~n  109 (267)
T 2gdz_A           38 DWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------EKNWEKTLQIN  109 (267)
T ss_dssp             ESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC--------SSSHHHHHHHH
T ss_pred             ECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC--------hhhHHHHHhHH
Confidence            68888888888887653  346888999999999999999999999999999999999642        45689999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHH--HHHhcCCCCeEEEEe
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL--ALEWGTDYAIRVNGI  157 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~l--a~e~~~~~gi~v~~v  157 (208)
                      +.+++.+++.++|.|.+++.+     ..++||++||..+..+.++...|+++|+++++|++++  +.|+. ++||+||+|
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~-~~gi~v~~v  183 (267)
T 2gdz_A          110 LVSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM-NSGVRLNAI  183 (267)
T ss_dssp             THHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhccCC-----CCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-cCCcEEEEE
Confidence            999999999999999765210     1489999999999999999999999999999999995  68898 889999999


Q ss_pred             ecCcccCCCccCCCChHHH------HHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          158 APGPIKDTAGVSKLAPEEI------RSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +||+++|++..........      ........+..++++|+|+|++++||+++.
T Consensus       184 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~  238 (267)
T 2gdz_A          184 CPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD  238 (267)
T ss_dssp             EESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT
T ss_pred             ecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCc
Confidence            9999999864332111111      011111223345779999999999999875

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.97  E-value=1.6e-30  Score=197.54  Aligned_cols=169  Identities=21%  Similarity=0.262  Sum_probs=144.2

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++..+ +|+  .++++++++++    .++|+||||||.....++.+.+.++|+.++++|+.+++.+++.++|.|++++  
T Consensus        61 ~~~~~-~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--  131 (249)
T 1o5i_A           61 HRYVV-CDL--RKDLDLLFEKV----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG--  131 (249)
T ss_dssp             SEEEE-CCT--TTCHHHHHHHS----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--
T ss_pred             CeEEE-eeH--HHHHHHHHHHh----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--
Confidence            45666 999  55677766654    3899999999988777788899999999999999999999999999998875  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH-h
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-K  179 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~  179 (208)
                            .++||++||..+..+.++...|+++|+++..|+++++.|+. ++||+|++|+||+++|++..... + .... .
T Consensus       132 ------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~-~-~~~~~~  202 (249)
T 1o5i_A          132 ------WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELL-S-EEKKKQ  202 (249)
T ss_dssp             ------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHS-C-HHHHHH
T ss_pred             ------CcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCccCcccccc-h-hhHHHH
Confidence                  68999999999999999999999999999999999999998 88999999999999998753221 1 1222 3


Q ss_pred             hhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          180 ATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +....|.+++++|+|+|++++||+++.+
T Consensus       203 ~~~~~p~~~~~~~~dvA~~i~~l~s~~~  230 (249)
T 1o5i_A          203 VESQIPMRRMAKPEEIASVVAFLCSEKA  230 (249)
T ss_dssp             HHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            4456788899999999999999999754

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.97  E-value=2.8e-31  Score=201.23  Aligned_cols=184  Identities=18%  Similarity=0.161  Sum_probs=129.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+     ..++..+.+|+++.++ ...+.+..+.++++|++|||||.....++.+.+.++|++++++|+.
T Consensus        35 ~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  108 (245)
T 3e9n_A           35 GRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVI  108 (245)
T ss_dssp             ESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhH
Confidence            577777665543     2358889999998877 5555555667789999999999988888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.++|.|+++         +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||+
T Consensus       109 ~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  178 (245)
T 3e9n_A          109 VPAELSRQLLPALRAA---------SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEA-NNGIRVSTVSPGP  178 (245)
T ss_dssp             HHHHHHHHHHHHHHHH---------TCEEEEEC----------CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECC
T ss_pred             HHHHHHHHHHHHHhhc---------CCeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCC
Confidence            9999999999999875         48899999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++......      ......+..++.+|+|+|++++||+++..
T Consensus       179 v~t~~~~~~~~------~~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          179 TNTPMLQGLMD------SQGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             C----------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             ccCchhhhhhh------hhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence            99987554321      11223455678899999999999998753

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.97  E-value=4.2e-30  Score=217.24  Aligned_cols=180  Identities=23%  Similarity=0.257  Sum_probs=143.2

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.++++++.+++...+..+   .+|++|.+++.++++++.+.+|++|+||||||+....++.+.+.++|+.++++|+.|
T Consensus        60 ~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g  136 (613)
T 3oml_A           60 ASQRAADIVVDEIRKAGGEA---VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKG  136 (613)
T ss_dssp             ----CHHHHHHHHHHTTCCE---EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence            47778889999998876554   389999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                      ++.++++++|.|++++        .|+||++||.++..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||++
T Consensus       137 ~~~l~~~~~p~m~~~~--------~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          137 SFKCTQAAFPYMKKQN--------YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA-RNNVLCNVIVPTAA  207 (613)
T ss_dssp             HHHHHHHHHHHHHTTT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC--
T ss_pred             HHHHHHHHHHHHHHcC--------CCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEECCCC
Confidence            9999999999999876        79999999999999999999999999999999999999998 89999999999975


Q ss_pred             cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                       |++........ .          .+..+|+|+|.+++||+|+.
T Consensus       208 -t~~~~~~~~~~-~----------~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          208 -SRMTEGILPDI-L----------FNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             -----CCCCCHH-H----------HTTCCGGGTHHHHHHTTSTT
T ss_pred             -Chhhhhccchh-h----------hhcCCHHHHHHHHHHhcCCC
Confidence             45444332221 1          13468999999999999986

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.97  E-value=7.1e-31  Score=211.17  Aligned_cols=187  Identities=13%  Similarity=0.004  Sum_probs=152.6

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-------------CCCCC-----------
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-------------FLVPA-----------   64 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-------------~~~~~-----------   64 (208)
                      +.+.+.+.+.+.++..+.+|++|+++++++++++.+++|+||+||||||..             ...++           
T Consensus       112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~  191 (418)
T 4eue_A          112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDV  191 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEET
T ss_pred             HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccc
Confidence            444555556677899999999999999999999999999999999999975             22233           


Q ss_pred             ----------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch--hHHHHh
Q 028508           65 ----------EDLSPNGFRTVIEIDSVGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAA  131 (208)
Q Consensus        65 ----------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~s  131 (208)
                                .+.+.++|+.++++|..+.+ .+++.+.+.+....        +|+||++||..+..+.+.+  +.|+++
T Consensus       192 ~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~--------gg~IV~iSSi~~~~~~p~~~~~aY~AS  263 (418)
T 4eue_A          192 ERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSD--------KATTIAYSYIGSPRTYKIYREGTIGIA  263 (418)
T ss_dssp             TTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHH
T ss_pred             cccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcC--------CcEEEEEeCchhcCCCCccccHHHHHH
Confidence                      35689999999999999888 77777776544333        6899999999999999988  999999


Q ss_pred             HHHHHHHHHHHHHHhcCC-CCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          132 KAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       132 Kaa~~~~~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |+|+.+|+++|+.|++ + +|||||+|+||+|.|++.............  ...++++.+++|++++++.||+|+.
T Consensus       264 KaAL~~ltrsLA~ELa-~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~--~~~~mk~~G~~E~v~e~~~~L~sd~  336 (418)
T 4eue_A          264 KKDLEDKAKLINEKLN-RVIGGRAFVSVNKALVTKASAYIPTFPLYAAI--LYKVMKEKNIHENCIMQIERMFSEK  336 (418)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHSCEEEEEECCCCCCHHHHTSTTHHHHHHH--HHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhC-CccCeEEEEEECCcCcChhhhcCCCCcHHHHH--HHHHHhhcCChHHHHHHHHHHhhcc
Confidence            9999999999999999 8 899999999999999876554332222111  2225677899999999999999863

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.97  E-value=1e-29  Score=193.37  Aligned_cols=177  Identities=20%  Similarity=0.162  Sum_probs=151.0

Q ss_pred             HHHHHHHHhcCCCe------------eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-CCCCCHHHHHHH
Q 028508            9 RSAVAALHSLGIPA------------IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTV   75 (208)
Q Consensus         9 ~~~~~~l~~~~~~~------------~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~   75 (208)
                      ..+++.|.+.|.++            ..+.+|++|.++++++++++.+++|++|+||||||...... +.+.+.++|+++
T Consensus        36 ~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~  115 (251)
T 3orf_A           36 AEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGM  115 (251)
T ss_dssp             HHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHH
Confidence            45556666555443            24678999999999999999999999999999999877644 677889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRV  154 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v  154 (208)
                      +++|+.+++.+++++.|.|++          +|+||++||..+..+.++...|+++|+|++.|+++++.|+. .++||+|
T Consensus       116 ~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v  185 (251)
T 3orf_A          116 IDMNLYSAFASAHIGAKLLNQ----------GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTS  185 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEE
T ss_pred             HHHHhHHHHHHHHHHHHhhcc----------CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEE
Confidence            999999999999999999865          48899999999999999999999999999999999999962 2679999


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++|+||+|+|++..          ......+..++.+|+|+|++++||+++
T Consensus       186 ~~v~PG~v~t~~~~----------~~~~~~~~~~~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          186 LGILPVTLDTPTNR----------KYMSDANFDDWTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             EEEEESCBCCHHHH----------HHCTTSCGGGSBCHHHHHHHHHHHHHC
T ss_pred             EEEecCcCcCcchh----------hhcccccccccCCHHHHHHHHHHHhcC
Confidence            99999999987432          223334566788999999999999988

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.97  E-value=3.7e-29  Score=195.40  Aligned_cols=177  Identities=21%  Similarity=0.143  Sum_probs=150.7

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCCCH-HHHHHHHHHHHHHhCCccEEEeCCCCCCC-----------------
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKR-EDAVRVVESTINHFGKLDILVNAAAGNFL-----------------   61 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~lv~~ag~~~~-----------------   61 (208)
                      ++|+.++++++.+++.+.+ .++.++.+|++|+ ++++.+++.+.+.+|++|+||||||+...                 
T Consensus        42 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~  121 (311)
T 3o26_A           42 TCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGED  121 (311)
T ss_dssp             EESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSS
T ss_pred             EeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccc
Confidence            3689999999999998764 4788999999998 99999999999999999999999998742                 


Q ss_pred             -------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC------
Q 028508           62 -------------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------  122 (208)
Q Consensus        62 -------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------  122 (208)
                                   ..+.+.+.++|++++++|+.|++.+++.++|.|++++        .++||++||..+..+.      
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--------~~~IV~isS~~~~~~~~~~~~~  193 (311)
T 3o26_A          122 SEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD--------SPRIVNVSSSTGSLKYVSNETA  193 (311)
T ss_dssp             TTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--------SCEEEEECCGGGSGGGCCCHHH
T ss_pred             hhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC--------CCeEEEEecCCcccccccchhh
Confidence                         2445678899999999999999999999999998765        6899999999887653      


Q ss_pred             -------------------------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          123 -------------------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       123 -------------------------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                                                           ++...|+++|+|+++|++.++.|+. +  |+|++|+||+|+|+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~-~--i~v~~v~PG~v~T~  270 (311)
T 3o26_A          194 LEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIP-K--FQVNCVCPGLVKTE  270 (311)
T ss_dssp             HHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCT-T--SEEEEECCCSBCSG
T ss_pred             hhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcC-C--ceEEEecCCceecC
Confidence                                                 4567899999999999999999986 4  99999999999998


Q ss_pred             CccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +.....                 ..++++.++.+++++..
T Consensus       271 ~~~~~~-----------------~~~~~~~a~~~~~~~~~  293 (311)
T 3o26_A          271 MNYGIG-----------------NYTAEEGAEHVVRIALF  293 (311)
T ss_dssp             GGTTCC-----------------SBCHHHHHHHHHHHHTC
T ss_pred             CcCCCC-----------------CCCHHHHHHHHHHHHhC
Confidence            754321                 23677788877777553

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=3.1e-29  Score=190.03  Aligned_cols=185  Identities=16%  Similarity=0.131  Sum_probs=145.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+.++++++.+ +  .+.++.++.+|++|+++++++++++.+.+|  ++|+||||||... ..++.+.+.++|+.++++
T Consensus        36 ~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~  112 (250)
T 1yo6_A           36 ARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV  112 (250)
T ss_dssp             ESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred             ecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHH
Confidence            566666655432 2  256788999999999999999999999998  9999999999887 677888899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEeccccccccC-------CchhHHHHhHHHHHHHHHHHHHHhcC
Q 028508           79 DSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYTAT-------WYQIHVSAAKAAVDSITRSLALEWGT  148 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~iv~iss~~~~~~~-------~~~~~y~~sKaa~~~~~~~la~e~~~  148 (208)
                      |+.+++.+++.++|.|.++...   .......++||++||..+..+.       ++...|+++|++++.|+++++.|+. 
T Consensus       113 N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-  191 (250)
T 1yo6_A          113 NTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-  191 (250)
T ss_dssp             HTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-
T ss_pred             hhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhc-
Confidence            9999999999999999765100   0000114789999999888776       6788999999999999999999998 


Q ss_pred             CCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          149 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       149 ~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++||+|+.|+||+++|++...                 .++.+++|+|+.+++++++..
T Consensus       192 ~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~  233 (250)
T 1yo6_A          192 DDNVLVVNFCPGWVQTNLGGK-----------------NAALTVEQSTAELISSFNKLD  233 (250)
T ss_dssp             GGTCEEEEEECCCC------------------------------HHHHHHHHHHHTTCC
T ss_pred             cCCeEEEEEcCCceecCCCCC-----------------CCCCCHHHHHHHHHHHHhccc
Confidence            889999999999999986432                 135789999999999998753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.97  E-value=1.7e-28  Score=189.89  Aligned_cols=184  Identities=19%  Similarity=0.184  Sum_probs=155.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCC-CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeC-CCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA-AAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...+. ++.++.+|++|.++++++++++.+.+|++|++||| +|... ..+.+.+.++|+.++++
T Consensus        58 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~v  136 (286)
T 1xu9_A           58 TARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEV  136 (286)
T ss_dssp             EESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC-CccccCCHHHHHHHHHH
Confidence            36889999998888877654 68889999999999999999999999999999999 56543 45556789999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHh--cCCCCeEEEE
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW--GTDYAIRVNG  156 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~--~~~~gi~v~~  156 (208)
                      |+.|++.++++++|.|.+.         .|+||++||..+..+.++...|+++|++++.|+++++.|+  . ..||+|+.
T Consensus       137 N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~-~~~i~v~~  206 (286)
T 1xu9_A          137 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS-RVNVSITL  206 (286)
T ss_dssp             HTHHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEE
T ss_pred             HhhHHHHHHHHHHHHHHHC---------CCEEEEECCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEE
Confidence            9999999999999998764         5889999999999999999999999999999999999999  5 77999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+||+++|++......          ........+++|+|+.++..+..
T Consensus       207 v~Pg~v~t~~~~~~~~----------~~~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          207 CVLGLIDTETAMKAVS----------GIVHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             EEECCBCCHHHHHHSC----------GGGGGGCBCHHHHHHHHHHHHHT
T ss_pred             eecCccCChhHHHhcc----------ccccCCCCCHHHHHHHHHHHHhc
Confidence            9999999975422110          00112356899999999987654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.96  E-value=2.3e-29  Score=190.22  Aligned_cols=165  Identities=16%  Similarity=0.037  Sum_probs=141.6

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHF--GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~--g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ..+.+|++|+++++++++++.+++  |++|+||||||.....++ .+.+.++|++++++|+.+++.+++++.|.|.+   
T Consensus        49 ~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---  125 (241)
T 1dhr_A           49 VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---  125 (241)
T ss_dssp             EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---
Confidence            456899999999999999999999  799999999998877777 77889999999999999999999999999854   


Q ss_pred             CCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                             +|+||++||..+..+.++...|+++|++++.|+++++.|+. .++||+||.|+||+++|++.......     
T Consensus       126 -------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-----  193 (241)
T 1dhr_A          126 -------GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE-----  193 (241)
T ss_dssp             -------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT-----
T ss_pred             -------CCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc-----
Confidence                   47899999999999999999999999999999999999984 15699999999999999854321110     


Q ss_pred             hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          179 KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                           ....+..+++|+|+.++||+++++
T Consensus       194 -----~~~~~~~~~~~vA~~v~~l~~~~~  217 (241)
T 1dhr_A          194 -----ADFSSWTPLEFLVETFHDWITGNK  217 (241)
T ss_dssp             -----SCGGGSEEHHHHHHHHHHHHTTTT
T ss_pred             -----hhhccCCCHHHHHHHHHHHhcCCC
Confidence                 111235678999999999998764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.96  E-value=5.9e-29  Score=191.00  Aligned_cols=176  Identities=22%  Similarity=0.254  Sum_probs=150.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCC-HHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+++...+.++.++.+|++|.++++++++++.+.++++|+||||||...... .+.+ .++|+.++++|+
T Consensus        36 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~  114 (276)
T 1wma_A           36 ARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNF  114 (276)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHT
T ss_pred             eCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCC-CccccHHHHHhhhheee
Confidence            68888899999998877778899999999999999999999999999999999999876443 2334 588999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------------------------------------
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------------------------------------  122 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--------------------------------------  122 (208)
                      .+++.+++.+.+.|.+          .++||++||..+..+.                                      
T Consensus       115 ~g~~~l~~~~~~~~~~----------~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~  184 (276)
T 1wma_A          115 FGTRDVCTELLPLIKP----------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ  184 (276)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTT
T ss_pred             eeHHHHHHHHHHhhCC----------CCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccc
Confidence            9999999999998754          4789999998776320                                      


Q ss_pred             ---CchhHHHHhHHHHHHHHHHHHHHhcCC----CCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHH
Q 028508          123 ---WYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI  195 (208)
Q Consensus       123 ---~~~~~y~~sKaa~~~~~~~la~e~~~~----~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  195 (208)
                         .+...|+++|++++.|++.++.++. +    +||+|++|+||+|.|++...                 .++.+|+|+
T Consensus       185 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~  246 (276)
T 1wma_A          185 KEGWPSSAYGVTKIGVTVLSRIHARKLS-EQRKGDKILLNACCPGWVRTDMAGP-----------------KATKSPEEG  246 (276)
T ss_dssp             TTTCCSCHHHHHHHHHHHHHHHHHHHHH-HHCTTSCCEEEEEECCSBCSTTTCT-----------------TCSBCHHHH
T ss_pred             cCCCccchhHHHHHHHHHHHHHHHHHhh-cccCCCceEEEEecCCccccCcCCc-----------------cccCChhHh
Confidence               1237899999999999999999997 6    79999999999999986532                 246799999


Q ss_pred             HHHHHHhcCCC
Q 028508          196 AMAALYLASDA  206 (208)
Q Consensus       196 a~~~~~L~s~~  206 (208)
                      |+.++||++++
T Consensus       247 a~~~~~l~~~~  257 (276)
T 1wma_A          247 AETPVYLALLP  257 (276)
T ss_dssp             THHHHHHHSCC
T ss_pred             hhhHhhhhcCc
Confidence            99999999844

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.96  E-value=1.6e-28  Score=188.08  Aligned_cols=186  Identities=18%  Similarity=0.132  Sum_probs=152.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+.++++.+ +++...+.++.++.+|++|.++++++++++.+.++  ++|+||||||... ..++.+.+.++|+.++++
T Consensus        55 ~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~  133 (267)
T 1sny_A           55 CRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQT  133 (267)
T ss_dssp             ESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             ecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhh
Confidence            4666655543 44444466899999999999999999999999998  8999999999887 567778899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEeccccccccCC---chhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           79 DSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYTATW---YQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~iv~iss~~~~~~~~---~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      |+.+++.+++.++|.|.++...   .......++||++||..+..+.+   +...|+++|++++.|++.++.|+. ++||
T Consensus       134 N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi  212 (267)
T 1sny_A          134 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRI  212 (267)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTC
T ss_pred             hchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-cCCc
Confidence            9999999999999999875100   00000137899999998877653   778899999999999999999998 8899


Q ss_pred             EEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +|+.|+||+|+|++...                 ....+|+++|+.+++++++.
T Consensus       213 ~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~  249 (267)
T 1sny_A          213 MCVSLHPGWVKTDMGGS-----------------SAPLDVPTSTGQIVQTISKL  249 (267)
T ss_dssp             EEEEECCCSBCSTTTCT-----------------TCSBCHHHHHHHHHHHHHHC
T ss_pred             EEEEeCCcceecCCCCC-----------------CCCCCHHHHHHHHHHHHHhc
Confidence            99999999999986532                 13568999999999998754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=6.6e-30  Score=198.32  Aligned_cols=180  Identities=19%  Similarity=0.138  Sum_probs=139.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++.+++   +.++.++.+|++|.++++++++++    +++|+||||||+..+  ..+.+.++|+.++++|+.
T Consensus        47 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~  117 (291)
T 3rd5_A           47 VRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHL  117 (291)
T ss_dssp             ESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTH
T ss_pred             ECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHH
Confidence            68888887776665   567899999999999999988876    789999999998753  355788899999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-------------CCchhHHHHhHHHHHHHHHHHHHHhcC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~~~  148 (208)
                      |++.++++++|.|.+            +||++||..+..+             .++...|+++|+|+..|++.++.|+. 
T Consensus       118 g~~~l~~~~~~~~~~------------riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-  184 (291)
T 3rd5_A          118 GHFALTNLLLPRLTD------------RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLT-  184 (291)
T ss_dssp             HHHHHHHHHGGGEEE------------EEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHh------------heeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHh-
Confidence            999999999998753            5999999988754             45678899999999999999999998 


Q ss_pred             CCC--eEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCC-HHHHHHHHHHhcCCC
Q 028508          149 DYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE-KWDIAMAALYLASDA  206 (208)
Q Consensus       149 ~~g--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dva~~~~~L~s~~  206 (208)
                      ++|  |+|++|+||+|+|++......  .. .......+.++... |+|+|+.++||++++
T Consensus       185 ~~g~~i~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~  242 (291)
T 3rd5_A          185 AAGSPLRALAAHPGYSHTNLQGASGR--KL-GDALMSAATRVVATDADFGARQTLYAASQD  242 (291)
T ss_dssp             HTTCCCEEEEECCSGGGSCC-----------------------CHHHHHHHHHHHHHHHSC
T ss_pred             hCCCCEEEEEeeCCCCccccccccch--HH-HHHHHHHHHHHHhCCHHHHHHHHHHHHcCC
Confidence            777  999999999999997654321  11 12222345566665 999999999999874

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.96  E-value=4.4e-29  Score=190.04  Aligned_cols=169  Identities=21%  Similarity=0.144  Sum_probs=138.9

Q ss_pred             CCCeeEEEcCCCCH-HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028508           19 GIPAIGLEGDVRKR-EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (208)
Q Consensus        19 ~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (208)
                      +.++.++.+|++|+ ++++++++++.+.++++|+||||||..        +.++|++++++|+.+++.++++++|.|.++
T Consensus        54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  125 (254)
T 1sby_A           54 KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKR  125 (254)
T ss_dssp             TSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGG
T ss_pred             CceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHh
Confidence            44688899999998 999999999999999999999999973        356799999999999999999999999765


Q ss_pred             CCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCCh---H
Q 028508           98 GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---E  174 (208)
Q Consensus        98 ~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~---~  174 (208)
                      +.+     ..|+||++||..+..+.++...|+++|++++.|+++++.++. ++||+|+.|+||+++|++.......   .
T Consensus       126 ~~~-----~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~  199 (254)
T 1sby_A          126 KGG-----PGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVE  199 (254)
T ss_dssp             GTC-----CCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSC
T ss_pred             cCC-----CCCEEEEECchhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCccccccchhhhhh
Confidence            310     148899999999999999999999999999999999999987 7899999999999999875432110   0


Q ss_pred             HHHHhhhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          175 EIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                      ..........|   ..+|+|+|+.++++++
T Consensus       200 ~~~~~~~~~~~---~~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          200 PRVAELLLSHP---TQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             TTHHHHHTTSC---CEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC---CCCHHHHHHHHHHHHH
Confidence            11111222222   3489999999999985

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=1.2e-28  Score=185.73  Aligned_cols=165  Identities=20%  Similarity=0.110  Sum_probs=139.7

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHF--GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~--g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ..+.+|++|+++++++++++.+.+  +++|+||||||.....++ .+.+.++|++.+++|+.+++.+++.+.|.|.+   
T Consensus        45 ~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---  121 (236)
T 1ooe_A           45 ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---  121 (236)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---
Confidence            457899999999999999999999  799999999998876676 67888999999999999999999999999854   


Q ss_pred             CCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                             +|+||++||..+..+.++...|+++|+++++|+++++.|+. .++||+|++|+||+++|++......      
T Consensus       122 -------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~------  188 (236)
T 1ooe_A          122 -------GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP------  188 (236)
T ss_dssp             -------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST------
T ss_pred             -------CCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC------
Confidence                   47899999999999999999999999999999999999984 1569999999999999975322110      


Q ss_pred             hhhhhhcCCCCCCHHHHHHHHH-HhcCCCC
Q 028508          179 KATDYMAAYKFGEKWDIAMAAL-YLASDAV  207 (208)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~-~L~s~~a  207 (208)
                          .....+..+++|+|+.++ +|+++.+
T Consensus       189 ----~~~~~~~~~~~dvA~~i~~~l~s~~~  214 (236)
T 1ooe_A          189 ----NADHSSWTPLSFISEHLLKWTTETSS  214 (236)
T ss_dssp             ----TCCGGGCBCHHHHHHHHHHHHHCGGG
T ss_pred             ----CccccccCCHHHHHHHHHHHHcCCCc
Confidence                011234568999999998 5547653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.96  E-value=2.9e-28  Score=184.00  Aligned_cols=177  Identities=23%  Similarity=0.283  Sum_probs=147.9

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP----NGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      .++.+|++|+++++++++++ +.++++|++|||||......+.+.+.    ++|++.+++|+.+++.+++++.+.|.+++
T Consensus        42 ~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  120 (242)
T 1uay_A           42 IYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENP  120 (242)
T ss_dssp             EEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCC
T ss_pred             EEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            56789999999999999999 88899999999999877665555444    49999999999999999999999998653


Q ss_pred             CCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                      ...  ....++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+|+.|+||+++|++.... . .....
T Consensus       121 ~~~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~-~~~~~  195 (242)
T 1uay_A          121 PDA--EGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQGL-P-EKAKA  195 (242)
T ss_dssp             CCT--TSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHTS-C-HHHHH
T ss_pred             CCC--CCCCeEEEEeCChhhccCCCCCchhhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccCcchhhhcc-c-hhHHH
Confidence            100  00135999999999999999999999999999999999999998 8899999999999999875432 2 22334


Q ss_pred             hhhhhhcC-CCCCCHHHHHHHHHHhcCC
Q 028508          179 KATDYMAA-YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       179 ~~~~~~~~-~~~~~~~dva~~~~~L~s~  205 (208)
                      ......|. +++.+++|+|++++||+++
T Consensus       196 ~~~~~~~~~~~~~~~~dva~~~~~l~~~  223 (242)
T 1uay_A          196 SLAAQVPFPPRLGRPEEYAALVLHILEN  223 (242)
T ss_dssp             HHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             HHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence            44556677 8899999999999999976

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.96  E-value=7.4e-29  Score=189.00  Aligned_cols=179  Identities=20%  Similarity=0.213  Sum_probs=132.8

Q ss_pred             HHHHHHHHhcCCCeeE-----------EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIG-----------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE   77 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~-----------~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~   77 (208)
                      ..+++.|.+.|.++..           +.+|++|.++++++++++   .+++|+||||||....       .+.|+.+++
T Consensus        15 ~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~---~~~id~lv~~Ag~~~~-------~~~~~~~~~   84 (257)
T 1fjh_A           15 AATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKC---SKGMDGLVLCAGLGPQ-------TKVLGNVVS   84 (257)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTC---TTCCSEEEECCCCCTT-------CSSHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHh---CCCCCEEEECCCCCCC-------cccHHHHHH
Confidence            4566667666655543           347888888888877633   3799999999997542       123899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc----------------------------ccCCchhHHH
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY----------------------------TATWYQIHVS  129 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~----------------------------~~~~~~~~y~  129 (208)
                      +|+.+++.++++++|.|++++        .++||++||..+.                            .+.++...|+
T Consensus        85 ~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  156 (257)
T 1fjh_A           85 VNYFGATELMDAFLPALKKGH--------QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA  156 (257)
T ss_dssp             HHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHhhcC--------CcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHH
Confidence            999999999999999998765        6899999999888                            4555788999


Q ss_pred             HhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhh--hhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       130 ~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++|++++.|++.++.|+. ++||+|++|+||+++|++........ .......  ..|++++.+|+|+|++++||+++++
T Consensus       157 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~  234 (257)
T 1fjh_A          157 GSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDP-RYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAA  234 (257)
T ss_dssp             HHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCccchhhccch-hHHHHHHhcccccCCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999998 88999999999999998765431111 1111122  4577789999999999999998764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=7.5e-28  Score=177.68  Aligned_cols=173  Identities=14%  Similarity=0.043  Sum_probs=145.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++.   .  .++.+|++|++++.+++++    ++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        28 ~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~   98 (207)
T 2yut_A           28 SGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHL   98 (207)
T ss_dssp             ECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHh
Confidence            3688888888777663   1  7889999999999999886    68999999999988777888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++++    .+++        .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+++.++||
T Consensus        99 ~~~~~l~~~~----~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~pg  165 (207)
T 2yut_A           99 LTAAFVLKHA----RFQK--------GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELL-REGVHLVLVRLP  165 (207)
T ss_dssp             HHHHHHHHHC----CEEE--------EEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEECCC
T ss_pred             HHHHHHHHHH----HhcC--------CcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCCEEEEEecC
Confidence            9999999988    2332        58999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++.|++...            ...+.+++.+++|+|+++++++++..
T Consensus       166 ~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          166 AVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             CBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             cccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999876221            12345678999999999999998653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.94  E-value=1.3e-26  Score=192.49  Aligned_cols=183  Identities=14%  Similarity=0.079  Sum_probs=150.8

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .++++++.+++.+.|.++.++.||++|.+++.++++++. ++|+||+||||||+.....+.+.+.++|+.++++|+.|++
T Consensus       300 ~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~  378 (525)
T 3qp9_A          300 DSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAAL  378 (525)
T ss_dssp             ---CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHH
Confidence            466788889998888899999999999999999999998 7899999999999998889999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .+.+.+.+.+++++.       .+.||++||..+..+.+++..|+++|+++++|+    .++. .+||++++|+||+++|
T Consensus       379 ~L~~~~~~~~~~~~~-------~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~lA----~~~~-~~gi~v~sI~pG~~~t  446 (525)
T 3qp9_A          379 HLDRLLREAAAAGGR-------PPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALA----GQHR-ADGPTVTSVAWSPWEG  446 (525)
T ss_dssp             HHHHHHHHTC----C-------CCEEEEEEEGGGTTCCTTCHHHHHHHHHHHHHH----TSCC-SSCCEEEEEEECCBTT
T ss_pred             HHHHHhccccccCCC-------CCEEEEECCHHHcCCCCCCHHHHHHHHHHHHHH----HHHH-hCCCCEEEEECCcccc
Confidence            999999998866431       378999999999999999999999999998875    4666 7899999999999998


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++.....    ....+. .. ..+.++++++++.+.++++..
T Consensus       447 gm~~~~~----~~~~~~-~~-g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          447 SRVTEGA----TGERLR-RL-GLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             SGGGSSH----HHHHHH-HT-TBCCBCHHHHHHHHHHHHHHT
T ss_pred             ccccchh----hHHHHH-hc-CCCCCCHHHHHHHHHHHHhCC
Confidence            8764321    111111 11 224679999999999998654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.94  E-value=4.7e-27  Score=213.28  Aligned_cols=188  Identities=13%  Similarity=0.110  Sum_probs=152.2

Q ss_pred             CCcHHHHHHHHHHHHh----cCCCeeEEEcCCCCHHHHHHHHHHHHHH-----hC-CccEEEeCCCCCCCC-CCCCCC--
Q 028508            2 GRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--   68 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-----~g-~id~lv~~ag~~~~~-~~~~~~--   68 (208)
                      +|+.++++++.+++.+    .+.++.++.||++|.++++++++++.+.     +| +||+||||||+.... ++.+.+  
T Consensus       708 ~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~  787 (1887)
T 2uv8_A          708 SRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSK  787 (1887)
T ss_dssp             SSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHH
T ss_pred             cCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcc
Confidence            5777788777777643    2567889999999999999999999988     66 999999999998776 788888  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHH-HHHHHHH
Q 028508           69 PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALE  145 (208)
Q Consensus        69 ~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~-~~~la~e  145 (208)
                      .++|++++++|+.+++.+++.+  .|.|++++        +|+||++||..+..+  +...|+++|+|+.+| ++.++.+
T Consensus       788 ~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~--------~G~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~e  857 (1887)
T 2uv8_A          788 SEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSES  857 (1887)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC--------EEEEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC--------CCEEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999988  66666543        589999999998877  678899999999999 8999999


Q ss_pred             hcCCCCeEEEEeecCccc-CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          146 WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       146 ~~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +. ++ |+||+|+||+|+ |++......    ........++ +..+|+|+|+.++||+|+.
T Consensus       858 la-~~-IrVNaV~PG~V~tT~m~~~~~~----~~~~~~~~pl-r~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          858 WA-NQ-LTVCGAIIGWTRGTGLMSANNI----IAEGIEKMGV-RTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             CT-TT-EEEEEEEECCEECC-----CCT----THHHHHTTSC-CCEEHHHHHHHHHGGGSHH
T ss_pred             hC-CC-eEEEEEEecccccccccccchh----HHHHHHhcCC-CCCCHHHHHHHHHHHhCCC
Confidence            98 76 999999999999 676543111    1112233444 6679999999999999975

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.94  E-value=4.3e-26  Score=206.71  Aligned_cols=188  Identities=13%  Similarity=0.136  Sum_probs=151.6

Q ss_pred             CCcHHHHHHHHHHHHh----cCCCeeEEEcCCCCHHHHHHHHHHHHHH---hC-CccEEEeCCCCCCCC-CCCCCC--HH
Q 028508            2 GRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVESTINH---FG-KLDILVNAAAGNFLV-PAEDLS--PN   70 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~---~g-~id~lv~~ag~~~~~-~~~~~~--~~   70 (208)
                      +|+.++++++.+++.+    .+.++.++.||++|.+++.++++++.+.   +| +||+||||||+.... ++.+.+  .+
T Consensus       685 ~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e  764 (1878)
T 2uv9_A          685 SRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSE  764 (1878)
T ss_dssp             SSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHH
T ss_pred             cCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHH
Confidence            3666677666655532    3567889999999999999999999998   88 999999999998776 788888  89


Q ss_pred             HHHHHHHHHHHHHHHHHHH--HHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHH-hc
Q 028508           71 GFRTVIEIDSVGTFIMCHE--ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE-WG  147 (208)
Q Consensus        71 ~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e-~~  147 (208)
                      +|++++++|+.+++.+++.  +++.|++++        .|+||++||..+..+  ++..|+++|+|+++|++.++.+ +.
T Consensus       765 ~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~--------~G~IVnISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla  834 (1878)
T 2uv9_A          765 LAHRIMLTNLLRLLGAIKTQKKERGYETRP--------AQVILPLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWG  834 (1878)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTCCSCC--------EEECCEECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHhCC--------CCEEEEEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999987  667766543        589999999998877  4778999999999999877654 76


Q ss_pred             CCCCeEEEEeecCccc-CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          148 TDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       148 ~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                       ++ |+||+|+||+++ |++...    ...........++ +..+|+|+|+.++||+|+.
T Consensus       835 -~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-r~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          835 -NY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-RTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             -TT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC-CCBCHHHHHHHHHHHHSHH
T ss_pred             -CC-eEEEEEEecceecCccccc----chhhHHHHHhcCC-CCCCHHHHHHHHHHHhCCc
Confidence             65 999999999999 886532    1111222233444 5679999999999999875

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.2e-27  Score=209.95  Aligned_cols=188  Identities=13%  Similarity=0.118  Sum_probs=152.9

Q ss_pred             CCcHHHHHHHHHHHHhc----CCCeeEEEcCCCCHHHHHHHHHHHHHH-----hC-CccEEEeCCCCCCCC-CCCCCC--
Q 028508            2 GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--   68 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~-----~g-~id~lv~~ag~~~~~-~~~~~~--   68 (208)
                      +|+.++++++.+++.+.    +.++.++.+|++|.++++++++++.+.     +| +||+||||||+.... ++.+.+  
T Consensus       509 ~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s  588 (1688)
T 2pff_A          509 SRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSK  588 (1688)
T ss_dssp             SSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTH
T ss_pred             CCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCC
Confidence            46666677777766432    556889999999999999999999988     77 999999999988776 788888  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHH-HHHHHHH
Q 028508           69 PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALE  145 (208)
Q Consensus        69 ~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~-~~~la~e  145 (208)
                      .++|++++++|+.+++.+++.+  .|.|++++        .|+||++||..+..+  +...|+++|+|+.+| .+.++.+
T Consensus       589 ~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg--------gGrIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeE  658 (1688)
T 2pff_A          589 SEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSES  658 (1688)
T ss_dssp             HHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC--------EEECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC--------CCEEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999998  77776654        589999999988876  678999999999999 7888888


Q ss_pred             hcCCCCeEEEEeecCccc-CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          146 WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       146 ~~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +. ++ |+||+|+||+|+ |++.....    .........+. +..+|+|+|++++||+|+.
T Consensus       659 la-~~-IRVNaVaPG~V~TT~M~~~~e----~~~~~l~~ipl-R~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          659 WA-NQ-LTVCGAIIGWTRGTGLMSANN----IIAEGIEKMGV-RTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             CT-TT-EECCCCCCCCCCCCSSSCTTT----TCSTTTSSSSC-CCCCCCTTHHHHHHHTSTT
T ss_pred             cC-CC-eEEEEEEECcCcCCcccCCch----HHHHHHHhCCC-CCCCHHHHHHHHHHHhCCC
Confidence            87 66 999999999999 66543210    11112223343 5679999999999999986

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=4e-25  Score=162.54  Aligned_cols=169  Identities=17%  Similarity=0.199  Sum_probs=141.5

Q ss_pred             HHHHHHHHhcCCCeeE-------EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIG-------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~-------~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      ..+++.|. .|.++..       +.+|++|+++++++++.+    +++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        17 ~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~   91 (202)
T 3d7l_A           17 SAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLG   91 (202)
T ss_dssp             HHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHH----CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTH
T ss_pred             HHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHh----CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccH
Confidence            45566666 5555443       579999999999988765    78999999999877677778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.+++.+.+.|.+          +++||++||..+..+.++...|+++|++++.+++.++.|+  ++||+++.++||+
T Consensus        92 ~~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~--~~gi~v~~v~pg~  159 (202)
T 3d7l_A           92 GQINLVLLGIDSLND----------KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM--PRGIRINTVSPNV  159 (202)
T ss_dssp             HHHHHHHTTGGGEEE----------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC--STTCEEEEEEECC
T ss_pred             HHHHHHHHHHHHhcc----------CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc--cCCeEEEEEecCc
Confidence            999999999988753          4789999999999999999999999999999999999987  4699999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++|++..           .....+..++.+++|+|+++++++++
T Consensus       160 v~~~~~~-----------~~~~~~~~~~~~~~dva~~~~~~~~~  192 (202)
T 3d7l_A          160 LEESWDK-----------LEPFFEGFLPVPAAKVARAFEKSVFG  192 (202)
T ss_dssp             BGGGHHH-----------HGGGSTTCCCBCHHHHHHHHHHHHHS
T ss_pred             cCCchhh-----------hhhhccccCCCCHHHHHHHHHHhhhc
Confidence            9987421           12334556788999999999988743

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.91  E-value=7.3e-24  Score=160.84  Aligned_cols=178  Identities=17%  Similarity=0.212  Sum_probs=137.2

Q ss_pred             HHHHHHHHhcCCCeeEE-----------EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL-----------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE   77 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~-----------~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~   77 (208)
                      ..+++.|.+.|.++..+           .+|+++.++++++++++   .+++|+||||||....       .+.|+..++
T Consensus        15 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~-------~~~~~~~~~   84 (255)
T 2dkn_A           15 AALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGVT-------AANSGLVVA   84 (255)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCTT-------SSCHHHHHH
T ss_pred             HHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHc---CCCccEEEECCCCCCc-------chhHHHHHH
Confidence            34566666666555433           57888888888887754   3689999999997542       234889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------------------------CchhHHHHh
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------------------------WYQIHVSAA  131 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--------------------------~~~~~y~~s  131 (208)
                      +|+.+++.+++++.+.|.+.+        .++||++||..+..+.                          ++...|+++
T Consensus        85 ~N~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  156 (255)
T 2dkn_A           85 VNYFGVSALLDGLAEALSRGQ--------QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGS  156 (255)
T ss_dssp             HHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHhhhcC--------CceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHH
Confidence            999999999999999998765        5899999999887654                          577889999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhh--cCCCCCCHHHHHHHHHHhcCCC
Q 028508          132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--AAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       132 Kaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |++++.+++.++.++. ++||+++.++||++.|++...... ...........  +.+++.+++|+|+++++|+++.
T Consensus       157 K~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  231 (255)
T 2dkn_A          157 KYAVTCLARRNVVDWA-GRGVRLNVVAPGAVETPLLQASKA-DPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQ  231 (255)
T ss_dssp             HHHHHHHHHHTHHHHH-HTTCEEEEEEECCBCSHHHHHHHH-CTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHh-hcCcEEEEEcCCcccchhhhhccc-chhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCC
Confidence            9999999999999998 789999999999999885432100 00011111122  6678999999999999999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.90  E-value=1.5e-24  Score=187.78  Aligned_cols=181  Identities=17%  Similarity=0.044  Sum_probs=144.7

Q ss_pred             CCc---HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            2 GRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~---~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+   .++++++.++++..|.++.++.||++|.++++++++++.+.+ +||+||||||+..+..+.+++.++|++++++
T Consensus       563 ~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~  641 (795)
T 3slk_A          563 SRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRP  641 (795)
T ss_dssp             ESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCC
T ss_pred             ccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHH
Confidence            466   556788899998888899999999999999999999998776 9999999999999889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.|++++++++.|.|              .||++||..+..+.+++..|+++|+    |+++|++++. ++||++++|+
T Consensus       642 nv~G~~~l~~~~~~~l--------------~iV~~SS~ag~~g~~g~~~YaAaka----~~~alA~~~~-~~Gi~v~sI~  702 (795)
T 3slk_A          642 KVDGARNLLELIDPDV--------------ALVLFSSVSGVLGSGGQGNYAAANS----FLDALAQQRQ-SRGLPTRSLA  702 (795)
T ss_dssp             CCCHHHHHHHHSCTTS--------------EEEEEEETHHHHTCSSCHHHHHHHH----HHHHHHHHHH-HTTCCEEEEE
T ss_pred             HHHHHHHHHHHHhhCC--------------EEEEEccHHhcCCCCCCHHHHHHHH----HHHHHHHHHH-HcCCeEEEEE
Confidence            9999999999986554              3999999999999999999999996    5555666666 7799999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ||++.|+++....... . ......... ....++|....+.+++..
T Consensus       703 pG~v~t~g~~~~~~~~-~-~~~~~~~g~-~~l~~~e~~~~~~~~l~~  746 (795)
T 3slk_A          703 WGPWAEHGMASTLREA-E-QDRLARSGL-LPISTEEGLSQFDAACGG  746 (795)
T ss_dssp             ECCCSCCCHHHHHHHH-H-HHHHHHTTB-CCCCHHHHHHHHHHHHTS
T ss_pred             CCeECcchhhccccHH-H-HHHHHhcCC-CCCCHHHHHHHHHHHHhC
Confidence            9999987543321111 1 111122222 345677777766666543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.90  E-value=6.6e-24  Score=174.65  Aligned_cols=179  Identities=12%  Similarity=0.048  Sum_probs=144.0

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGT   83 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~   83 (208)
                      .+.++++.+++...|.++.++.||++|.+++.++++++.+. +++|+||||||+. ....+.+.+.++|+.++++|+.|+
T Consensus       277 ~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~  355 (496)
T 3mje_A          277 APGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAA  355 (496)
T ss_dssp             STTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHH
T ss_pred             hHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence            34577888889888889999999999999999999998776 7999999999998 667889999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                      +.+.+.+.+.    .        .+.||++||..+..+.+++..|+++|+++++|++.++     .+||++++|+||++.
T Consensus       356 ~~L~~~~~~~----~--------~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~~~~-----~~Gi~v~sV~pG~w~  418 (496)
T 3mje_A          356 RHLHELTADL----D--------LDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHRR-----SLGLTASSVAWGTWG  418 (496)
T ss_dssp             HHHHHHHTTS----C--------CSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHHHHH-----HTTCCCEEEEECEES
T ss_pred             HHHHHHhhcc----C--------CCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHHHHH-----hcCCeEEEEECCccc
Confidence            9998876543    2        5789999999999999999999999999999888543     568999999999998


Q ss_pred             CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ++.+.....   ....+...  .....+|+++++.+.+++...
T Consensus       419 ~~gm~~~~~---~~~~l~~~--g~~~l~pe~~~~~l~~~l~~~  456 (496)
T 3mje_A          419 EVGMATDPE---VHDRLVRQ--GVLAMEPEHALGALDQMLEND  456 (496)
T ss_dssp             SSCC---------CHHHHHT--TEEEECHHHHHHHHHHHHHHT
T ss_pred             CCccccChH---HHHHHHhc--CCCCCCHHHHHHHHHHHHcCC
Confidence            765543211   11111111  112458999999998887643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.90  E-value=1.8e-23  Score=197.49  Aligned_cols=193  Identities=12%  Similarity=0.004  Sum_probs=139.7

Q ss_pred             CCcHHH-----HHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHH----HhCCccEEEeCCCCC----CC-CCCCCC
Q 028508            2 GRRKTV-----LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN----HFGKLDILVNAAAGN----FL-VPAEDL   67 (208)
Q Consensus         2 ~R~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~----~~g~id~lv~~ag~~----~~-~~~~~~   67 (208)
                      +|+.++     ++++.+++...|.++..+.+|++|.++++++++++.+    .+|++|+||||||+.    .. ....+.
T Consensus      2168 ~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~ 2247 (3089)
T 3zen_D         2168 TSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAG 2247 (3089)
T ss_dssp             ESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCC
T ss_pred             eCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCC
Confidence            455544     6777777766677788999999999999999999998    899999999999972    11 222333


Q ss_pred             CHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHH
Q 028508           68 SPNGF----RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA  143 (208)
Q Consensus        68 ~~~~~----~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la  143 (208)
                      +.++|    +..+++|+.+++.+++.+.+.|..++.+.    ..+.|+..++..+.  .++...|+++|+|+.+|+++++
T Consensus      2248 ~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~----~~~ii~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA 2321 (3089)
T 3zen_D         2248 DMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIAS----RLHVVLPGSPNRGM--FGGDGAYGEAKSALDALENRWS 2321 (3089)
T ss_dssp             TTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC----CEEEEEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc----eeEEEEECCccccc--CCCchHHHHHHHHHHHHHHHHH
Confidence            44444    45599999999999999999998765211    01233444443332  3355689999999999999999


Q ss_pred             HH--hcCCCCeEEEEeecCccc-CCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          144 LE--WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       144 ~e--~~~~~gi~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .|  ++ + +|+||+++||+|. |++......    ........+.+ ..+|+|+|.+++||+|+++
T Consensus      2322 ~E~~~a-~-~IrVn~v~PG~v~tT~l~~~~~~----~~~~~~~~~~r-~~~PeEIA~avlfLaS~~a 2381 (3089)
T 3zen_D         2322 AEKSWA-E-RVSLAHALIGWTKGTGLMGQNDA----IVSAVEEAGVT-TYTTDEMAAMLLDLCTVET 2381 (3089)
T ss_dssp             HCSTTT-T-TEEEEEEECCCEECSTTTTTTTT----THHHHGGGSCB-CEEHHHHHHHHHHTTSHHH
T ss_pred             hccccC-C-CeEEEEEeecccCCCcccccchh----HHHHHHhcCCC-CCCHHHHHHHHHHHhChhh
Confidence            99  65 4 6999999999999 544332111    11222334443 4599999999999999864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.87  E-value=4.2e-22  Score=164.19  Aligned_cols=181  Identities=13%  Similarity=-0.014  Sum_probs=141.7

Q ss_pred             CCcHH---HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            2 GRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+..   .++++.+++...+.++.++.||++|.+++.++++.+ ..++++|+||||||......+.+.+.++++.++++
T Consensus       258 ~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~  336 (486)
T 2fr1_A          258 SRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRA  336 (486)
T ss_dssp             ESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHH
T ss_pred             cCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHH
Confidence            45543   467788888887888999999999999999999998 56789999999999988888888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.|++.+.+.+.+    .+        .++||++||..+..+.+++..|+++|++++.|++.++     .+|+++++|+
T Consensus       337 nv~g~~~L~~~~~~----~~--------~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~~~-----~~gi~v~~i~  399 (486)
T 2fr1_A          337 KVLGARNLHELTRE----LD--------LTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRR-----SDGLPATAVA  399 (486)
T ss_dssp             HHHHHHHHHHHHTT----SC--------CSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHHH-----HTTCCCEEEE
T ss_pred             HHHHHHHHHHHhCc----CC--------CCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHHHH-----hcCCeEEEEE
Confidence            99999999987643    22        5789999999999999999999999999999876543     4589999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ||++.++.+.....    ...+..  .....++++|+++.+.+++...
T Consensus       400 pG~~~~~gm~~~~~----~~~~~~--~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          400 WGTWAGSGMAEGPV----ADRFRR--HGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             ECCBC----------------CTT--TTEECBCHHHHHHHHHHHHHTT
T ss_pred             CCeeCCCcccchhH----HHHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence            99998763322110    011100  0113679999999999987643

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.85  E-value=1.1e-20  Score=156.41  Aligned_cols=176  Identities=16%  Similarity=0.070  Sum_probs=140.7

Q ss_pred             CCcH---HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            2 GRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~---~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+.   ..++++.+++...+.++.++.||++|.+++.++++.     +++|+||||||......+.+.+.++++.++++
T Consensus       291 ~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~  365 (511)
T 2z5l_A          291 SRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-----YPPNAVFHTAGILDDAVIDTLSPESFETVRGA  365 (511)
T ss_dssp             ESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred             ecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-----CCCcEEEECCcccCCcccccCCHHHHHHHHHH
Confidence            4554   346778888888788899999999999999998876     68999999999988888888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.|++.+.+.+.+.   .+        .++||++||..+..+.+++..|+++|++++.|++.+    . ..|+++++|+
T Consensus       366 nv~g~~~L~~~~~~~---~~--------~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~~----~-~~gi~v~sv~  429 (511)
T 2z5l_A          366 KVCGAELLHQLTADI---KG--------LDAFVLFSSVTGTWGNAGQGAYAAANAALDALAERR----R-AAGLPATSVA  429 (511)
T ss_dssp             HHHHHHHHHHHTSSC---TT--------CCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHHH----H-TTTCCCEEEE
T ss_pred             HHHHHHHHHHHHhhc---cC--------CCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHHH----H-HcCCcEEEEE
Confidence            999999998875321   02        478999999999999999999999999999999865    3 5689999999


Q ss_pred             cCcc-cCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ||++ .|++... .    ...... . .....++++|+++.+..++..
T Consensus       430 pG~~~~tgm~~~-~----~~~~~~-~-~g~~~l~~e~~a~~l~~al~~  470 (511)
T 2z5l_A          430 WGLWGGGGMAAG-A----GEESLS-R-RGLRAMDPDAAVDALLGAMGR  470 (511)
T ss_dssp             ECCBCSTTCCCC-H----HHHHHH-H-HTBCCBCHHHHHHHHHHHHHH
T ss_pred             CCcccCCccccc-c----cHHHHH-h-cCCCCCCHHHHHHHHHHHHhC
Confidence            9999 5554322 1    111111 1 112467999999999988754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.76  E-value=2.2e-17  Score=126.28  Aligned_cols=141  Identities=10%  Similarity=0.043  Sum_probs=110.7

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       ++|+||||||..        +.+.|+.++++|+.|++.+++++.+    .+ 
T Consensus        43 ~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~-  102 (267)
T 3rft_A           43 PNEECVQCDLADANAVNAMVA-------GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HG-  102 (267)
T ss_dssp             TTEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TT-
T ss_pred             CCCEEEEcCCCCHHHHHHHHc-------CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cC-
Confidence            357789999999999998876       799999999973        2345889999999999999999843    33 


Q ss_pred             CCCCCCCCceEEEecccccc------------ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          100 GQASSSSGGIIINISATLHY------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~------------~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                             .++||++||..++            .+.++...|+.+|++.+.+++.++.++    |++++.|+||.+.++..
T Consensus       103 -------~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~----g~~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          103 -------QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF----GQETALVRIGSCTPEPN  171 (267)
T ss_dssp             -------CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECBCSSSCC
T ss_pred             -------CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCeEEEEEeecccCCCC
Confidence                   5789999998876            334566889999999999999999876    48899999999987643


Q ss_pred             cCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ...    ...          .+..++|+++.+..++..
T Consensus       172 ~~~----~~~----------~~~~~~d~a~~~~~~~~~  195 (267)
T 3rft_A          172 NYR----MLS----------TWFSHDDFVSLIEAVFRA  195 (267)
T ss_dssp             STT----HHH----------HBCCHHHHHHHHHHHHHC
T ss_pred             CCC----cee----------eEEcHHHHHHHHHHHHhC
Confidence            221    111          145778888887777644

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.73  E-value=6.6e-18  Score=160.01  Aligned_cols=146  Identities=14%  Similarity=0.070  Sum_probs=110.9

Q ss_pred             CCcHH---HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            2 GRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      +|+..   ...+..+++...|.++..+.||++|.++++++++++. ++|+||+||||||+.....+.+++.++|++++++
T Consensus      1916 ~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~ 1994 (2512)
T 2vz8_A         1916 SRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKP 1994 (2512)
T ss_dssp             CSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC----------------CTTT
T ss_pred             eCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHH
Confidence            45543   3455667777777788999999999999999999987 4799999999999988888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      |+.|++++.+.+.+.+.+          .++||++||..+..+.+++..|+++|+++++|++.++.+     |+...++.
T Consensus      1995 nv~g~~~l~~~~~~~~~~----------~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~rr~~-----Gl~~~a~~ 2059 (2512)
T 2vz8_A         1995 KYSGTANLDRVTREACPE----------LDYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRRHD-----GLPGLAVQ 2059 (2512)
T ss_dssp             THHHHHHHHHHHHHHCTT----------CCEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHHHHHT-----TSCCCEEE
T ss_pred             HHHHHHHHHHHHHHhccc----------CCEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHHHHHC-----CCcEEEEE
Confidence            999999999999988754          478999999999999999999999999999999987643     56677777


Q ss_pred             cCccc
Q 028508          159 PGPIK  163 (208)
Q Consensus       159 pG~v~  163 (208)
                      +|.+.
T Consensus      2060 ~g~~~ 2064 (2512)
T 2vz8_A         2060 WGAIG 2064 (2512)
T ss_dssp             ECCBC
T ss_pred             ccCcC
Confidence            77664

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.70  E-value=6.8e-17  Score=121.25  Aligned_cols=156  Identities=19%  Similarity=0.157  Sum_probs=115.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCe-eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++++++.+      .++ .++.+|++         +.+.+.++++|+||||||....        ++++..+++|+
T Consensus        52 ~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~~~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~  108 (236)
T 3e8x_A           52 VRNEEQGPELRE------RGASDIVVANLE---------EDFSHAFASIDAVVFAAGSGPH--------TGADKTILIDL  108 (236)
T ss_dssp             ESSGGGHHHHHH------TTCSEEEECCTT---------SCCGGGGTTCSEEEECCCCCTT--------SCHHHHHHTTT
T ss_pred             ECChHHHHHHHh------CCCceEEEcccH---------HHHHHHHcCCCEEEECCCCCCC--------CCccccchhhH
Confidence            466666554332      146 88999998         3444556789999999996542        45889999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC---CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      .++..+++++..    .+        .++||++||..+..+.   +....|+.+|++++.+++        ..|++++.+
T Consensus       109 ~~~~~l~~a~~~----~~--------~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~--------~~gi~~~~l  168 (236)
T 3e8x_A          109 WGAIKTIQEAEK----RG--------IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK--------RSSLDYTIV  168 (236)
T ss_dssp             HHHHHHHHHHHH----HT--------CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH--------HSSSEEEEE
T ss_pred             HHHHHHHHHHHH----cC--------CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH--------HCCCCEEEE
Confidence            999999998843    23        4789999998777665   577899999999998876        347999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +||++.++........      .........+..++|+|++++++++++
T Consensus       169 rpg~v~~~~~~~~~~~------~~~~~~~~~~i~~~Dva~~~~~~~~~~  211 (236)
T 3e8x_A          169 RPGPLSNEESTGKVTV------SPHFSEITRSITRHDVAKVIAELVDQQ  211 (236)
T ss_dssp             EECSEECSCCCSEEEE------ESSCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred             eCCcccCCCCCCeEEe------ccCCCcccCcEeHHHHHHHHHHHhcCc
Confidence            9999998754322110      001112346789999999999999875

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.70  E-value=9.7e-17  Score=119.22  Aligned_cols=149  Identities=9%  Similarity=0.038  Sum_probs=108.7

Q ss_pred             CCcHH-HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+++ +++++.    ..+.++..+.+|++|.+++.++++       ++|+||||+|..                   |+
T Consensus        37 ~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vv~~ag~~-------------------n~   86 (221)
T 3r6d_A           37 GRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NAEVVFVGAMES-------------------GS   86 (221)
T ss_dssp             ESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TCSEEEESCCCC-------------------HH
T ss_pred             ecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CCCEEEEcCCCC-------------------Ch
Confidence            46665 554433    235678899999999999988875       789999999853                   22


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchh----------HHHHhHHHHHHHHHHHHHHhcCCC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI----------HVSAAKAAVDSITRSLALEWGTDY  150 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~----------~y~~sKaa~~~~~~~la~e~~~~~  150 (208)
                      .     ++.+++.+++.+        .++||++||..++.+.+...          .|+.+|.+++.+++        ..
T Consensus        87 ~-----~~~~~~~~~~~~--------~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~--------~~  145 (221)
T 3r6d_A           87 D-----MASIVKALSRXN--------IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLR--------ES  145 (221)
T ss_dssp             H-----HHHHHHHHHHTT--------CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH--------HS
T ss_pred             h-----HHHHHHHHHhcC--------CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHH--------hC
Confidence            2     778888888765        57899999998887666554          89999999988775        24


Q ss_pred             CeEEEEeecCcccCCCccCCCChHHHHHhhhhhhc-CCCCCCHHHHHHHHHHhc--CCCC
Q 028508          151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLA--SDAV  207 (208)
Q Consensus       151 gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~L~--s~~a  207 (208)
                      |++++.|+||++.++........      .....+ .+++.+++|+|+++++|+  ++++
T Consensus       146 ~i~~~~vrpg~v~~~~~~~~~~~------~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~  199 (221)
T 3r6d_A          146 NLNYTILRLTWLYNDPEXTDYEL------IPEGAQFNDAQVSREAVVKAIFDILHAADET  199 (221)
T ss_dssp             CSEEEEEEECEEECCTTCCCCEE------ECTTSCCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred             CCCEEEEechhhcCCCCCcceee------ccCCccCCCceeeHHHHHHHHHHHHHhcChh
Confidence            79999999999988732221110      001112 234678999999999999  8764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.70  E-value=7.8e-17  Score=126.93  Aligned_cols=151  Identities=17%  Similarity=0.111  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC-------------CC---------
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-------------PA---------   64 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~-------------~~---------   64 (208)
                      ....+.+++++.|.++..+.||++|+++++++++++++++|+||+||||+++....             ++         
T Consensus        99 ~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~l  178 (401)
T 4ggo_A           99 NNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTV  178 (401)
T ss_dssp             HHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEE
T ss_pred             hHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccc
Confidence            35667778888899999999999999999999999999999999999999976311             10         


Q ss_pred             ------------CCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch--hH
Q 028508           65 ------------EDLSPNGFRTVIEI---DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IH  127 (208)
Q Consensus        65 ------------~~~~~~~~~~~~~~---n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~  127 (208)
                                  ...+.++++....+   ..+..+...+...+.|.+          ++++|.+|+.++....|.+  ..
T Consensus       179 dt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~----------G~siva~SYiGse~t~P~Y~~G~  248 (401)
T 4ggo_A          179 DPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEE----------GCITLAYSYIGPEATQALYRKGT  248 (401)
T ss_dssp             CTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE----------EEEEEEEECCCCGGGHHHHTTSH
T ss_pred             cccccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC----------CceEEEEeccCcceeecCCCccH
Confidence                        12345566555554   455555556555555533          6899999999887766654  47


Q ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC
Q 028508          128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (208)
Q Consensus       128 y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~  170 (208)
                      +|++|+++++.++.|+.++. +  ++++.+.+|.+.|.....-
T Consensus       249 mG~AKaaLEa~~r~La~eL~-~--~~a~v~v~~a~vT~AssaI  288 (401)
T 4ggo_A          249 IGKAKEHLEATAHRLNKENP-S--IRAFVSVNKGLVTRASAVI  288 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHCT-T--EEEEEEECCCCCCTTGGGS
T ss_pred             HHHHHHHHHHHHHHHHHhcC-C--CcEEEEEcCccccchhhcC
Confidence            89999999999999999997 4  8999999999998755443

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.69  E-value=1.1e-16  Score=120.34  Aligned_cols=150  Identities=14%  Similarity=0.005  Sum_probs=109.8

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       ++|+||||||....       .+.++..+++|+.++..+++++.    +.+  
T Consensus        64 ~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~--  123 (242)
T 2bka_A           64 NVNQEVVDFEKLDDYASAFQ-------GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELAK----AGG--  123 (242)
T ss_dssp             GCEEEECCGGGGGGGGGGGS-------SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHHH----HTT--
T ss_pred             CceEEecCcCCHHHHHHHhc-------CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHHH----HCC--
Confidence            35678899999988877654       79999999996432       24578889999999998888754    333  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCe-EEEEeecCcccCCCccCCCChHHHHHh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~  179 (208)
                            .++||++||..++.+  +...|+.+|++++.+++.+        ++ +++.|+||+++|+...... .......
T Consensus       124 ------~~~iv~~SS~~~~~~--~~~~Y~~sK~~~e~~~~~~--------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~  186 (242)
T 2bka_A          124 ------CKHFNLLSSKGADKS--SNFLYLQVKGEVEAKVEEL--------KFDRYSVFRPGVLLCDRQESRP-GEWLVRK  186 (242)
T ss_dssp             ------CCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHHTT--------CCSEEEEEECCEEECTTGGGSH-HHHHHHH
T ss_pred             ------CCEEEEEccCcCCCC--CcchHHHHHHHHHHHHHhc--------CCCCeEEEcCceecCCCCCCcH-HHHHHHH
Confidence                  478999999877653  4467999999999888642        45 7999999999998543211 1112222


Q ss_pred             hhhhhc----CCCCCCHHHHHHHHHHhcCCCC
Q 028508          180 ATDYMA----AYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       180 ~~~~~~----~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      .....|    .+++..++|+|+++++++++++
T Consensus       187 ~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          187 FFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             HHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             hhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence            222233    4567899999999999998764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.68  E-value=4.9e-16  Score=122.35  Aligned_cols=177  Identities=13%  Similarity=-0.028  Sum_probs=127.4

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEE-EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGL-EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++.+.+.+.+... +.++.++ .+|++|.+++.++++       ++|+|||+||.....       ++++..+++|
T Consensus        42 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~~-------~~~~~~~~~n  107 (342)
T 1y1p_A           42 ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGVAHIASVVSFS-------NKYDEVVTPA  107 (342)
T ss_dssp             ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEEEECCCCCSCC-------SCHHHHHHHH
T ss_pred             eCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-------CCCEEEEeCCCCCCC-------CCHHHHHHHH
Confidence            57777776666655432 3567777 899999988777654       799999999975431       2467789999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-cC------------------------------CchhHH
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT------------------------------WYQIHV  128 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~------------------------------~~~~~y  128 (208)
                      +.++..+++++.+.   .+        .++||++||..++. +.                              .+...|
T Consensus       108 ~~g~~~ll~~~~~~---~~--------~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y  176 (342)
T 1y1p_A          108 IGGTLNALRAAAAT---PS--------VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVY  176 (342)
T ss_dssp             HHHHHHHHHHHHTC---TT--------CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHhC---CC--------CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHH
Confidence            99999999988641   22        47899999987652 11                              234679


Q ss_pred             HHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC---hHHHHHhhhhh--------hcCCCCCCHHHHHH
Q 028508          129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDY--------MAAYKFGEKWDIAM  197 (208)
Q Consensus       129 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~dva~  197 (208)
                      +.+|++.+.+++.++.++. . |++++.++||.+.++.......   ...+.......        .+...+..++|+|+
T Consensus       177 ~~sK~~~e~~~~~~~~~~~-~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  254 (342)
T 1y1p_A          177 AASKTEAELAAWKFMDENK-P-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGL  254 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-C-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcC-C-CceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHH
Confidence            9999999999999999986 5 8999999999999986543211   11111111111        12345678999999


Q ss_pred             HHHHhcCC
Q 028508          198 AALYLASD  205 (208)
Q Consensus       198 ~~~~L~s~  205 (208)
                      ++++++..
T Consensus       255 a~~~~~~~  262 (342)
T 1y1p_A          255 LHLGCLVL  262 (342)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHcC
Confidence            99998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.68  E-value=6.8e-16  Score=122.57  Aligned_cols=170  Identities=19%  Similarity=0.095  Sum_probs=121.3

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.+++++     +++|+|||+||....    +.+.++++..+++|+.++..+++++.+.|..-+.
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~  120 (361)
T 1kew_A           50 NRYNFEHADICDSAEITRIFEQ-----YQPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGE  120 (361)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCH
T ss_pred             CCeEEEECCCCCHHHHHHHHhh-----cCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccc
Confidence            3578899999999999988875     279999999996431    1234567889999999999999999988753100


Q ss_pred             CCCCCCCCceEEEeccccccc---------------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508          100 GQASSSSGGIIINISATLHYT---------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~---------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .   ...+++||++||...+.                     +..+...|+.+|++.+.+++.++.++    |++++.++
T Consensus       121 ~---~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~~vr  193 (361)
T 1kew_A          121 D---KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTN  193 (361)
T ss_dssp             H---HHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEE
T ss_pred             c---cccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCcEEEEe
Confidence            0   00024899999975332                     12456789999999999999998876    59999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhh--h-------cCCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDY--M-------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ||.++++..........+.......  .       +...+..++|+|+++++++++
T Consensus       194 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  249 (361)
T 1kew_A          194 CSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTE  249 (361)
T ss_dssp             ECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             eceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhC
Confidence            9999998653221111222222221  1       123456899999999999864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.67  E-value=5.9e-16  Score=121.05  Aligned_cols=160  Identities=14%  Similarity=0.090  Sum_probs=117.7

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +.++.+|++|.+++.++++.     +++|+|||+||.....    .+.++++..+++|+.++..+++++ +.+.  +   
T Consensus        53 ~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~---  117 (321)
T 2pk3_A           53 VEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L---  117 (321)
T ss_dssp             EEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C---
T ss_pred             eeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C---
Confidence            45678999999999988875     3799999999965421    223467889999999999999998 5442  2   


Q ss_pred             CCCCCCceEEEeccccccccC-------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          102 ASSSSGGIIINISATLHYTAT-------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~-------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                           .++||++||...+...             ++...|+.+|++.+.+++.++.++    |++++.++||.+.+|...
T Consensus       118 -----~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          118 -----DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY----GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             -----CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCC
T ss_pred             -----CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc----CCCEEEEEeCcccCcCCC
Confidence                 4789999998755432             456789999999999999998765    599999999999988654


Q ss_pred             CCCChHHHHHhhhh---h-----------hcCCCCCCHHHHHHHHHHhcCC
Q 028508          169 SKLAPEEIRSKATD---Y-----------MAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       169 ~~~~~~~~~~~~~~---~-----------~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      .......+......   .           .+...+..++|+|+++++++.+
T Consensus       189 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  239 (321)
T 2pk3_A          189 LGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQY  239 (321)
T ss_dssp             TTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhC
Confidence            32111122222111   1           1123457899999999999864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.66  E-value=2.9e-15  Score=118.16  Aligned_cols=169  Identities=16%  Similarity=0.080  Sum_probs=121.9

Q ss_pred             HHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           12 VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL   91 (208)
Q Consensus        12 ~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   91 (208)
                      .+.+... .++.++.+|++|.+++.++++..     ++|+|||+||....    +.+.++++..+++|+.++..+++++.
T Consensus        43 ~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~  112 (347)
T 1orr_A           43 LHWLSSL-GNFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVR  112 (347)
T ss_dssp             HHHHHTT-CCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhccC-CceEEEEcCCCCHHHHHHHHhcc-----CCCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHH
Confidence            3444432 36888999999999999888752     79999999996432    12345678899999999999999998


Q ss_pred             HHHHhcCCCCCCCCCCceEEEeccccccc---------------------------cCCchhHHHHhHHHHHHHHHHHHH
Q 028508           92 KYLKKGGRGQASSSSGGIIINISATLHYT---------------------------ATWYQIHVSAAKAAVDSITRSLAL  144 (208)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~iv~iss~~~~~---------------------------~~~~~~~y~~sKaa~~~~~~~la~  144 (208)
                      +...           .++||++||...+.                           +..+...|+.+|++.+.+++.++.
T Consensus       113 ~~~~-----------~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~  181 (347)
T 1orr_A          113 QYNS-----------NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR  181 (347)
T ss_dssp             HHCT-----------TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCC-----------CceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHH
Confidence            7532           35799999986543                           223567899999999999999988


Q ss_pred             HhcCCCCeEEEEeecCcccCCCccCCCC---hHHHHHhhhhhh-----cCC---------CCCCHHHHHHHHHHhcCC
Q 028508          145 EWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYM-----AAY---------KFGEKWDIAMAALYLASD  205 (208)
Q Consensus       145 e~~~~~gi~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~-----~~~---------~~~~~~dva~~~~~L~s~  205 (208)
                      ++    |++++.++||.++++.......   ...+........     +..         .+..++|+|+++++++..
T Consensus       182 ~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  255 (347)
T 1orr_A          182 IF----GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN  255 (347)
T ss_dssp             HH----CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT
T ss_pred             Hh----CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc
Confidence            75    5999999999999986433211   111212221111     221         256899999999998863

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.66  E-value=1.1e-15  Score=120.86  Aligned_cols=172  Identities=15%  Similarity=0.063  Sum_probs=127.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+..+++++.+++.  ..++.++.+|++|.+++.++++       ++|+|||+||.....    .........+++|+.
T Consensus        54 ~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~-------~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~  120 (344)
T 2gn4_A           54 SRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE-------GVDICIHAAALKHVP----IAEYNPLECIKTNIM  120 (344)
T ss_dssp             ESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCHH----HHHHSHHHHHHHHHH
T ss_pred             ECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh-------cCCEEEECCCCCCCC----chhcCHHHHHHHHHH
Confidence            577777777776664  3468899999999999887764       799999999965421    122345688999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |+..+++++.+.    +        .++||++||..+..+   ...|+++|++.+.+++.++.++. ++|++++.++||.
T Consensus       121 gt~~l~~aa~~~----~--------v~~~V~~SS~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~-~~g~~~~~vRpg~  184 (344)
T 2gn4_A          121 GASNVINACLKN----A--------ISQVIALSTDKAANP---INLYGATKLCSDKLFVSANNFKG-SSQTQFSVVRYGN  184 (344)
T ss_dssp             HHHHHHHHHHHT----T--------CSEEEEECCGGGSSC---CSHHHHHHHHHHHHHHHGGGCCC-SSCCEEEEECCCE
T ss_pred             HHHHHHHHHHhC----C--------CCEEEEecCCccCCC---ccHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEEEecc
Confidence            999999998763    2        468999999766543   46899999999999999999887 7899999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhh---hc------CCCCCCHHHHHHHHHHhcCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDY---MA------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~dva~~~~~L~s~  205 (208)
                      +.++...  . -..+.......   .+      .+.+..++|+++++++++..
T Consensus       185 v~g~~~~--~-i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~  234 (344)
T 2gn4_A          185 VVGSRGS--V-VPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKR  234 (344)
T ss_dssp             ETTCTTS--H-HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHH
T ss_pred             EECCCCC--H-HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhh
Confidence            9986421  1 11122211111   11      12257889999999998754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.65  E-value=2.1e-15  Score=118.61  Aligned_cols=160  Identities=16%  Similarity=0.047  Sum_probs=117.2

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.+++       +++|+|||+||....    +.+.++++..+++|+.++..+++++.+.  . . 
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~-------~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~-  118 (336)
T 2hun_A           54 PRYTFVKGDVADYELVKELV-------RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE--N-P-  118 (336)
T ss_dssp             TTEEEEECCTTCHHHHHHHH-------HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-T-
T ss_pred             CceEEEEcCCCCHHHHHHHh-------hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-C-
Confidence            35778999999999988877       279999999996431    1234567889999999999999999875  1 1 


Q ss_pred             CCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                             .++||++||...+.           +..+...|+.+|++.+.+++.++.++    |++++.++||.++++...
T Consensus       119 -------~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~g~~~~  187 (336)
T 2hun_A          119 -------EVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY----NLNASITRCTNNYGPYQF  187 (336)
T ss_dssp             -------TSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEEECEEESTTCC
T ss_pred             -------CcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeeeeeCcCCC
Confidence                   36899999976432           33456789999999999999998765    599999999999988643


Q ss_pred             CCCChHHHHHhhhhh--h-------cCCCCCCHHHHHHHHHHhcCC
Q 028508          169 SKLAPEEIRSKATDY--M-------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      .......+.......  .       +...+..++|+|+++++++.+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  233 (336)
T 2hun_A          188 PEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLK  233 (336)
T ss_dssp             TTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHH
T ss_pred             cCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence            211111122222211  1       123466889999999998754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.63  E-value=1.9e-15  Score=114.01  Aligned_cols=158  Identities=13%  Similarity=-0.006  Sum_probs=108.7

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---------EDLSPNGFRTVIEIDSVGTFIMCHEA   90 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~   90 (208)
                      .++.++.+|++|.+++.++++       ++|+|||++|.......         .+...+.++..+++|+.++..+++++
T Consensus        48 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  120 (253)
T 1xq6_A           48 GEADVFIGDITDADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA  120 (253)
T ss_dssp             CCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHH
T ss_pred             CCeeEEEecCCCHHHHHHHHc-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHH
Confidence            457789999999999888775       69999999997643211         12223445567899999999988887


Q ss_pred             HHHHHhcCCCCCCCCCCceEEEeccccccccCCchhH-----HHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508           91 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH-----VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~-----y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                      ...    +        .++||++||..+..+..+...     |+.+|++++.+++        ..|++++.++||.+.++
T Consensus       121 ~~~----~--------~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~i~~~~vrpg~v~~~  180 (253)
T 1xq6_A          121 KVA----G--------VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLA--------DSGTPYTIIRAGGLLDK  180 (253)
T ss_dssp             HHH----T--------CSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHH--------TSSSCEEEEEECEEECS
T ss_pred             HHc----C--------CCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHHHH--------hCCCceEEEecceeecC
Confidence            542    2        468999999987654443333     5669999888765        35899999999999987


Q ss_pred             CccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ................  ....++..++|+|+++++++.+.
T Consensus       181 ~~~~~~~~~~~~~~~~--~~~~~~~~~~Dva~~~~~~~~~~  219 (253)
T 1xq6_A          181 EGGVRELLVGKDDELL--QTDTKTVPRADVAEVCIQALLFE  219 (253)
T ss_dssp             CSSSSCEEEESTTGGG--GSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             CcchhhhhccCCcCCc--CCCCcEEcHHHHHHHHHHHHcCc
Confidence            5322110000000010  11245779999999999998764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.62  E-value=8.1e-16  Score=114.06  Aligned_cols=140  Identities=14%  Similarity=0.100  Sum_probs=108.0

Q ss_pred             CCeeEEEcCCCC-HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           20 IPAIGLEGDVRK-REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        20 ~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      .++.++.+|++| .+++.++++       ++|+|||++|.....            .+++|+.++..+++++.    +.+
T Consensus        41 ~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~~ag~~~~~------------~~~~n~~~~~~l~~a~~----~~~   97 (219)
T 3dqp_A           41 NNVKAVHFDVDWTPEEMAKQLH-------GMDAIINVSGSGGKS------------LLKVDLYGAVKLMQAAE----KAE   97 (219)
T ss_dssp             TTEEEEECCTTSCHHHHHTTTT-------TCSEEEECCCCTTSS------------CCCCCCHHHHHHHHHHH----HTT
T ss_pred             CCceEEEecccCCHHHHHHHHc-------CCCEEEECCcCCCCC------------cEeEeHHHHHHHHHHHH----HhC
Confidence            357788999999 888877664       799999999976521            46678889888888773    333


Q ss_pred             CCCCCCCCCceEEEeccccccccCCc-------hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC
Q 028508           99 RGQASSSSGGIIINISATLHYTATWY-------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL  171 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~~~-------~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~  171 (208)
                              .++||++||..+..+.+.       ...|+.+|++.+.+++      . ..|++++.++||.+.++......
T Consensus        98 --------~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~------~-~~~i~~~ilrp~~v~g~~~~~~~  162 (219)
T 3dqp_A           98 --------VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT------K-ETNLDYTIIQPGALTEEEATGLI  162 (219)
T ss_dssp             --------CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH------H-SCCCEEEEEEECSEECSCCCSEE
T ss_pred             --------CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH------h-ccCCcEEEEeCceEecCCCCCcc
Confidence                    468999999988776665       7889999999998886      2 56899999999999987433221


Q ss_pred             ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          172 APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .         .......+..++|+|+++++++.++
T Consensus       163 ~---------~~~~~~~~i~~~Dva~~i~~~l~~~  188 (219)
T 3dqp_A          163 D---------INDEVSASNTIGDVADTIKELVMTD  188 (219)
T ss_dssp             E---------ESSSCCCCEEHHHHHHHHHHHHTCG
T ss_pred             c---------cCCCcCCcccHHHHHHHHHHHHhCc
Confidence            1         0133456789999999999998764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.61  E-value=7.7e-15  Score=115.61  Aligned_cols=141  Identities=13%  Similarity=0.007  Sum_probs=104.9

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+.++.++..+.+... +.++.++.+|++|.+++.++++.     +++|+|||+||.....    ...+.....+++|+
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~----~~~~~~~~~~~~n~  106 (341)
T 3enk_A           36 DNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HPITAAIHFAALKAVG----ESVAKPIEYYRNNL  106 (341)
T ss_dssp             CCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SCCCEEEECCCCCCHH----HHHHCHHHHHHHHH
T ss_pred             ecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cCCcEEEECccccccC----ccccChHHHHHHHH
Confidence            34444444444444432 45688899999999999998875     4899999999975431    12344567888999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTD  149 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~  149 (208)
                      .++..+++++.    +.+        .++||++||...+.           +..+...|+.+|++.+.+++.++.++.  
T Consensus       107 ~~~~~l~~~~~----~~~--------~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--  172 (341)
T 3enk_A          107 DSLLSLLRVMR----ERA--------VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--  172 (341)
T ss_dssp             HHHHHHHHHHH----HTT--------CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--
T ss_pred             HHHHHHHHHHH----hCC--------CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--
Confidence            99998877653    333        47899999976552           223446899999999999999998864  


Q ss_pred             CCeEEEEeecCcccCCC
Q 028508          150 YAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       150 ~gi~v~~v~pG~v~t~~  166 (208)
                       |++++.++||.+.+|.
T Consensus       173 -~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          173 -SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             -TCEEEEEEECEEECCC
T ss_pred             -CceEEEEeeccccCCc
Confidence             6999999999998874

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.61  E-value=8.9e-15  Score=116.05  Aligned_cols=166  Identities=16%  Similarity=0.115  Sum_probs=119.2

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+++.++++.+     ++|+|||+||...    .+.+.++++..+++|+.++..+++++.+.   ..
T Consensus        56 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~  123 (357)
T 1rkx_A           56 ADGMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG  123 (357)
T ss_dssp             TTTSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC
T ss_pred             CCceEEEEccccCHHHHHHHHHhc-----CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC
Confidence            346788999999999999888765     7999999999532    12345667889999999999999998753   11


Q ss_pred             CCCCCCCCCceEEEeccccccc------------cCCchhHHHHhHHHHHHHHHHHHHHhcC-----CCCeEEEEeecCc
Q 028508           99 RGQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGP  161 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~~~-----~~gi~v~~v~pG~  161 (208)
                              .++||++||...+.            +..+...|+.+|++.+.+++.++.++..     +.|++++.++||.
T Consensus       124 --------~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~  195 (357)
T 1rkx_A          124 --------VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGN  195 (357)
T ss_dssp             --------CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCC
T ss_pred             --------CCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeece
Confidence                    36899999986432            2345678999999999999999988730     1389999999999


Q ss_pred             ccCCCccCCCC-hHHHHHhhhhhhc--------CCCCCCHHHHHHHHHHhcC
Q 028508          162 IKDTAGVSKLA-PEEIRSKATDYMA--------AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       162 v~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~L~s  204 (208)
                      +.+|....... ...+........+        ...+...+|++++++.++.
T Consensus       196 v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          196 VIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             EECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             eeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHH
Confidence            99875422111 1112222211111        1235678999999998874

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.60  E-value=1.9e-14  Score=113.97  Aligned_cols=159  Identities=13%  Similarity=-0.020  Sum_probs=117.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       ++|+|||+||.....    .+.++++..+++|+.++..+++++.+.    + 
T Consensus        81 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-  144 (352)
T 1sb8_A           81 SNFKFIQGDIRNLDDCNNACA-------GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K-  144 (352)
T ss_dssp             TTEEEEECCTTSHHHHHHHHT-------TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CceEEEECCCCCHHHHHHHhc-------CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-
Confidence            468889999999998887765       799999999964321    134568889999999999999988642    2 


Q ss_pred             CCCCCCCCceEEEeccccccccCC-----------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          100 GQASSSSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                             .++||++||...+.+.+           +...|+.+|++.+.+++.++.++    |++++.++||.+.+|...
T Consensus       145 -------~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          145 -------VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             -------CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCC
T ss_pred             -------CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEEECceeCcCCC
Confidence                   46899999987665432           46789999999999999998775    589999999999988643


Q ss_pred             CCC----ChHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCC
Q 028508          169 SKL----APEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       169 ~~~----~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ...    ....+........+         ...+..++|+|+++++++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          214 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  263 (352)
T ss_dssp             CCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             CCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence            321    01112222222211         12467899999999988764

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.60  E-value=5.4e-14  Score=113.21  Aligned_cols=128  Identities=13%  Similarity=0.091  Sum_probs=100.7

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+++.++++..     ++|+|||+||....... ..+++++...+++|+.++..+++++.+.    +
T Consensus        76 ~~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~  145 (404)
T 1i24_A           76 GKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----G  145 (404)
T ss_dssp             CCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----C
T ss_pred             CCceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----C
Confidence            456888999999999999888754     69999999997543211 1256677889999999999999998653    1


Q ss_pred             CCCCCCCCCceEEEeccccccc------------------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           99 RGQASSSSGGIIINISATLHYT------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~------------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                      .       ..+||++||...+.                        +..+...|+.+|++.+.+++.++.++    |+++
T Consensus       146 ~-------~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~  214 (404)
T 1i24_A          146 E-------ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRA  214 (404)
T ss_dssp             T-------TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEE
T ss_pred             C-------CcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc----CCeE
Confidence            0       14799999986442                        22345689999999999999988765    5999


Q ss_pred             EEeecCcccCCCc
Q 028508          155 NGIAPGPIKDTAG  167 (208)
Q Consensus       155 ~~v~pG~v~t~~~  167 (208)
                      +.++||.|.+|..
T Consensus       215 ~ivrp~~v~Gp~~  227 (404)
T 1i24_A          215 TDLNQGVVYGVKT  227 (404)
T ss_dssp             EEEEECEEECSCC
T ss_pred             EEEecceeeCCCC
Confidence            9999999998854

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.59  E-value=1.6e-14  Score=114.12  Aligned_cols=158  Identities=16%  Similarity=0.073  Sum_probs=115.3

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       .+|+|||+||....    +.+.++++..+++|+.++..+++++.+.      
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~------  116 (348)
T 1oc2_A           54 DRVELVVGDIADAELVDKLAA-------KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY------  116 (348)
T ss_dssp             SSEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------
T ss_pred             CCeEEEECCCCCHHHHHHHhh-------cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh------
Confidence            357788999999998887765       57999999996432    1234556789999999999999998764      


Q ss_pred             CCCCCCCCceEEEeccccccc-----------------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508          100 GQASSSSGGIIINISATLHYT-----------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-----------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                             +++||++||...+.                       +..+...|+.+|++.+.+++.++.++    |++++.
T Consensus       117 -------~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~i  185 (348)
T 1oc2_A          117 -------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATI  185 (348)
T ss_dssp             -------TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEE
T ss_pred             -------CCeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEE
Confidence                   23799999976432                       22356789999999999999998776    599999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhh---------cCCCCCCHHHHHHHHHHhcCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++||.+.++..........+........         +...+..++|+|+++++++.+
T Consensus       186 lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  243 (348)
T 1oc2_A          186 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK  243 (348)
T ss_dssp             EEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH
T ss_pred             EeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhC
Confidence            9999999886532211112222222111         122467899999999998864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.57  E-value=7.1e-14  Score=108.91  Aligned_cols=157  Identities=13%  Similarity=0.046  Sum_probs=113.9

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|+++ +++.++++       ++|+|||+|+...    .+.+.++++..+++|+.++..+++++..    .+  
T Consensus        44 ~~~~~~~Dl~~-~~~~~~~~-------~~d~vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--  105 (313)
T 3ehe_A           44 AARLVKADLAA-DDIKDYLK-------GAEEVWHIAANPD----VRIGAENPDEIYRNNVLATYRLLEAMRK----AG--  105 (313)
T ss_dssp             TEEEECCCTTT-SCCHHHHT-------TCSEEEECCCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HT--
T ss_pred             CcEEEECcCCh-HHHHHHhc-------CCCEEEECCCCCC----hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            45678899998 87777664       7999999999543    2345567889999999999999988643    33  


Q ss_pred             CCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            .++||++||...+.           +..+...|+.+|.+.+.+++.++.++    |++++.++||.+.+|....
T Consensus       106 ------~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~  175 (313)
T 3ehe_A          106 ------VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF----DMQAWIYRFANVIGRRSTH  175 (313)
T ss_dssp             ------CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEECSCEESTTCCC
T ss_pred             ------CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccccCcCCCc
Confidence                  46899999987652           33456789999999999999998765    5999999999999875432


Q ss_pred             CCChHHHHHhhhhhh---------cCCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLAPEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ...............         ....+...+|+|+++++++.+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  220 (313)
T 3ehe_A          176 GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG  220 (313)
T ss_dssp             SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC
T ss_pred             ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc
Confidence            211111111111111         122467789999999999874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.57  E-value=1.2e-13  Score=105.27  Aligned_cols=141  Identities=9%  Similarity=0.025  Sum_probs=107.1

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       ++|+|||+||...        .+.++..+++|+.++..+++++.+    .+  
T Consensus        43 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~--  101 (267)
T 3ay3_A           43 HEEIVACDLADAQAVHDLVK-------DCDGIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARN----LG--  101 (267)
T ss_dssp             TEEECCCCTTCHHHHHHHHT-------TCSEEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHH----TT--
T ss_pred             CccEEEccCCCHHHHHHHHc-------CCCEEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----hC--
Confidence            45778899999998888765       6999999999651        234678899999999999998864    22  


Q ss_pred             CCCCCCCceEEEeccccccccCC------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          101 QASSSSGGIIINISATLHYTATW------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                            .++||++||...+...+            +...|+.+|++.+.+++.++.    .+|++++.++||.+....  
T Consensus       102 ------~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~----~~gi~~~~lrp~~v~~~~--  169 (267)
T 3ay3_A          102 ------KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH----KFDIETLNIRIGSCFPKP--  169 (267)
T ss_dssp             ------CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH----TTCCCEEEEEECBCSSSC--
T ss_pred             ------CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH----HcCCCEEEEeceeecCCC--
Confidence                  46899999987664432            357899999999999998864    447999999999985211  


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                         .....         ...+..++|+|+++++++...
T Consensus       170 ---~~~~~---------~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          170 ---KDARM---------MATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             ---CSHHH---------HHHBCCHHHHHHHHHHHHHSS
T ss_pred             ---CCCCe---------eeccccHHHHHHHHHHHHhCC
Confidence               11110         123678999999999987643

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.56  E-value=2.4e-14  Score=112.64  Aligned_cols=159  Identities=17%  Similarity=0.096  Sum_probs=114.9

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.+++       +++|+|||+||....    +.+.++++..+++|+.++..+++++.+.    + 
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~-------~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~-  118 (337)
T 1r6d_A           55 PRLRFVHGDIRDAGLLAREL-------RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-  118 (337)
T ss_dssp             TTEEEEECCTTCHHHHHHHT-------TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CCeEEEEcCCCCHHHHHHHh-------cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-
Confidence            46788999999999887776       489999999996432    1233456788999999999999998753    2 


Q ss_pred             CCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                             .++||++||...+.           +..+...|+.+|++.+.+++.++.++    |++++.++||.+.+|...
T Consensus       119 -------~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilrp~~v~G~~~~  187 (337)
T 1r6d_A          119 -------VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQH  187 (337)
T ss_dssp             -------CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCC
T ss_pred             -------CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH----CCCEEEEEeeeeECCCCC
Confidence                   36799999976442           23456789999999999999998765    589999999999988643


Q ss_pred             CCCChHHHHHhhhhhh--c-------CCCCCCHHHHHHHHHHhcCC
Q 028508          169 SKLAPEEIRSKATDYM--A-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .......+........  +       ...+..++|+|+++++++.+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  233 (337)
T 1r6d_A          188 PEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG  233 (337)
T ss_dssp             TTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC
Confidence            2111111222222111  1       12356789999999998754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.55  E-value=1.5e-13  Score=108.48  Aligned_cols=162  Identities=14%  Similarity=0.053  Sum_probs=113.8

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++..     ++|+|||+||.....    ...++++..+++|+.++..+++++...    + 
T Consensus        75 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-  140 (346)
T 4egb_A           75 PNYYFVKGEIQNGELLEHVIKER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----P-  140 (346)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----T-
T ss_pred             CCeEEEEcCCCCHHHHHHHHhhc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C-
Confidence            36788999999999999988753     699999999976432    244567788999999999999887542    2 


Q ss_pred             CCCCCCCCceEEEeccccccccC------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          100 GQASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                             .++||++||...+...            .+...|+.+|.+.+.+++.++.+.    |++++.++||.+.+|..
T Consensus       141 -------~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          141 -------HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY----QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             -------TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTC
T ss_pred             -------CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeecceeCcCC
Confidence                   4679999998655432            234779999999999999998765    58999999999998754


Q ss_pred             cCCCChHHHHHhhhhhhcC---------CCCCCHHHHHHHHHHhcCCC
Q 028508          168 VSKLAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~L~s~~  206 (208)
                      ........+........+.         ..+...+|+|+++++++...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  257 (346)
T 4egb_A          210 YPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKG  257 (346)
T ss_dssp             CTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             CccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcC
Confidence            3322122222222222211         12346899999999987653

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.55  E-value=2.7e-14  Score=115.99  Aligned_cols=155  Identities=12%  Similarity=0.006  Sum_probs=107.6

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+++.        .++++|+||||||...       ..+.++..+++|+.++..+++++.+     +
T Consensus       129 ~~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~  188 (427)
T 4f6c_A          129 LSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H  188 (427)
T ss_dssp             HTTEEEEEECC---CCCC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----T
T ss_pred             cCceEEEeCCCCCcccCC--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----c
Confidence            357899999999988887        4579999999999753       2345788899999999999999876     2


Q ss_pred             CCCCCCCCCceEEEeccccc------------------cccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           99 RGQASSSSGGIIINISATLH------------------YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~------------------~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                              ..+||++||...                  ..+..+...|+.+|++.+.+++.++.     +|++++.++||
T Consensus       189 --------~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ivRpg  255 (427)
T 4f6c_A          189 --------HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVG  255 (427)
T ss_dssp             --------TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-----TTCCEEEEEEC
T ss_pred             --------CCcEEEECchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH-----cCCCEEEEeCC
Confidence                    467999999876                  00123678899999999999998652     47999999999


Q ss_pred             cccCCCccCCCCh-------HHHHHhhhhh--h------cCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLAP-------EEIRSKATDY--M------AAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~~-------~~~~~~~~~~--~------~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .|.++........       ..+.......  .      ....+...+|+|+++++++...
T Consensus       256 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~  316 (427)
T 4f6c_A          256 NLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN  316 (427)
T ss_dssp             CEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSC
T ss_pred             eeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCC
Confidence            9998765433211       1111111111  1      1223678899999999998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.54  E-value=6.5e-14  Score=110.22  Aligned_cols=157  Identities=13%  Similarity=0.029  Sum_probs=110.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       .+|+|||+|+...   ...  .+..+..+++|+.++..+++++.+..   .  
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~---~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~--  119 (337)
T 2c29_D           57 HLTLWKADLADEGSFDEAIK-------GCTGVFHVATPMD---FES--KDPENEVIKPTIEGMLGIMKSCAAAK---T--  119 (337)
T ss_dssp             HEEEEECCTTSTTTTHHHHT-------TCSEEEECCCCCC---SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---C--
T ss_pred             eEEEEEcCCCCHHHHHHHHc-------CCCEEEEeccccC---CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---C--
Confidence            47788999999998887764       6899999998542   111  22345688999999999999987642   1  


Q ss_pred             CCCCCCCceEEEeccccccccC----------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508          101 QASSSSGGIIINISATLHYTAT----------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~----------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                            .++||++||..+..+.                      +....|+.+|.+.+.+++.++.+.    |++++.++
T Consensus       120 ------~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lr  189 (337)
T 2c29_D          120 ------VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN----NIDFITII  189 (337)
T ss_dssp             ------CCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH----TCCEEEEE
T ss_pred             ------ccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEe
Confidence                  3679999998754321                      123469999999999888776543    69999999


Q ss_pred             cCcccCCCccCCCChHHHHHh---------hhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSK---------ATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ||.|++|........ .....         .....+..++..++|+|+++++++..
T Consensus       190 p~~v~Gp~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  244 (337)
T 2c29_D          190 PTLVVGPFIMSSMPP-SLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFEN  244 (337)
T ss_dssp             ECEEESCCSCSSCCH-HHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHC
T ss_pred             CCceECCCCCCCCCc-hHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcC
Confidence            999999865433221 11110         01112234588999999999999854

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.54  E-value=9.3e-14  Score=109.39  Aligned_cols=154  Identities=11%  Similarity=-0.003  Sum_probs=107.7

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       ++|+|||+||...      ...++++..+++|+.++..+++++.+.    +  
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--  117 (342)
T 2x4g_A           57 EPECRVAEMLDHAGLERALR-------GLDGVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----R--  117 (342)
T ss_dssp             CCEEEECCTTCHHHHHHHTT-------TCSEEEEC------------------CHHHHHHHHHHHHHHHHHHH----T--
T ss_pred             CeEEEEecCCCHHHHHHHHc-------CCCEEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C--
Confidence            46778999999998887764       6999999999643      234567788999999999999998764    2  


Q ss_pred             CCCCCCCceEEEeccccccccCCc----------------hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508          101 QASSSSGGIIINISATLHYTATWY----------------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~----------------~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                            -++||++||...+...+.                ...|+.+|++.+.+++.++.    . |++++.++||.+.+
T Consensus       118 ------~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~----~-g~~~~ilrp~~v~g  186 (342)
T 2x4g_A          118 ------VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR----N-GLPVVIGIPGMVLG  186 (342)
T ss_dssp             ------CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH----T-TCCEEEEEECEEEC
T ss_pred             ------CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh----c-CCcEEEEeCCceEC
Confidence                  367999999887654433                67899999999999998875    3 79999999999998


Q ss_pred             CCc-cCCCChHHHHHhhhhhhc------CCCCCCHHHHHHHHHHhcCCC
Q 028508          165 TAG-VSKLAPEEIRSKATDYMA------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       165 ~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +.. ... .. .+........+      ...+..++|+|+++++++.+.
T Consensus       187 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  233 (342)
T 2x4g_A          187 ELDIGPT-TG-RVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERG  233 (342)
T ss_dssp             SCCSSCS-TT-HHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHS
T ss_pred             CCCcccc-HH-HHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCC
Confidence            865 211 11 22222222211      112568999999999998653

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.53  E-value=7.6e-14  Score=108.64  Aligned_cols=160  Identities=12%  Similarity=0.039  Sum_probs=113.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++..     ++|++||+|+....    ..+.++++..+++|+.++..+++++..    .+  
T Consensus        44 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~--  108 (311)
T 2p5y_A           44 GVPFFRVDLRDKEGVERAFREF-----RPTHVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG--  108 (311)
T ss_dssp             TCCEECCCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT--
T ss_pred             CeEEEECCCCCHHHHHHHHHhc-----CCCEEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC--
Confidence            3557889999999998887642     79999999986432    123466788999999999999998753    22  


Q ss_pred             CCCCCCCceEEEecccccccc-------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          101 QASSSSGGIIINISATLHYTA-------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                            .++||++||.++..+             ..+...|+.+|++.+.+++.++.++    |++++.++||.+++|..
T Consensus       109 ------~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          109 ------VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY----GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             ------CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTC
T ss_pred             ------CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc----CCCEEEEeeccccCcCC
Confidence                  468999999822211             1245689999999999999998765    59999999999998864


Q ss_pred             cCCCCh---HHHHHhhhhhh--------------cCCCCCCHHHHHHHHHHhcCC
Q 028508          168 VSKLAP---EEIRSKATDYM--------------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       168 ~~~~~~---~~~~~~~~~~~--------------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ......   ..+........              +...+..++|+|+++++++..
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  233 (311)
T 2p5y_A          179 DPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS  233 (311)
T ss_dssp             CSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred             CCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence            332111   11111111111              112456789999999998753

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.53  E-value=2e-13  Score=107.20  Aligned_cols=153  Identities=16%  Similarity=0.057  Sum_probs=105.7

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++++     ++|+|||+||.....     +.++++  +++|+.++..+++++..    .+  
T Consensus        66 ~v~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~--  127 (330)
T 2pzm_A           66 GLSVIEGSVTDAGLLERAFDSF-----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASK----AG--  127 (330)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----HT--
T ss_pred             CceEEEeeCCCHHHHHHHHhhc-----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHH----cC--
Confidence            4667899999999999888765     799999999975432     345566  99999999999999873    22  


Q ss_pred             CCCCCCCceEEEeccccccccC-----C------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYTAT-----W------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-----~------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            .++||++||...+...     +      +...|+.+|++.+.+++.+  +      ++...|+|+.+..|....
T Consensus       128 ------~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~------~~~~~iR~~~v~gp~~~~  193 (330)
T 2pzm_A          128 ------VKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--D------VPVVSLRLANVTGPRLAI  193 (330)
T ss_dssp             ------CSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--S------SCEEEEEECEEECTTCCS
T ss_pred             ------CCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--C------CCEEEEeeeeeECcCCCC
Confidence                  4789999998776443     2      5678999999999998865  3      344455555555443211


Q ss_pred             CCChHHHHHhhhhhhc------CCCCCCHHHHHH-HHHHhcCCC
Q 028508          170 KLAPEEIRSKATDYMA------AYKFGEKWDIAM-AALYLASDA  206 (208)
Q Consensus       170 ~~~~~~~~~~~~~~~~------~~~~~~~~dva~-~~~~L~s~~  206 (208)
                      .. ...+........+      ...+..++|+|+ ++++++++.
T Consensus       194 ~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~  236 (330)
T 2pzm_A          194 GP-IPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGR  236 (330)
T ss_dssp             SH-HHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTC
T ss_pred             CH-HHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcC
Confidence            11 1111111111101      345679999999 999998753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.53  E-value=1.9e-13  Score=109.36  Aligned_cols=166  Identities=12%  Similarity=0.008  Sum_probs=116.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++.+     ++|+|||+||....    ..+.++++..+++|+.++..+++++.+...+++. 
T Consensus        84 ~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~-  153 (381)
T 1n7h_A           84 LMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-  153 (381)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-
T ss_pred             ceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC-
Confidence            5778999999999999888765     79999999996442    1234668889999999999999999988765321 


Q ss_pred             CCCCCCCceEEEeccccccc----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC
Q 028508          101 QASSSSGGIIINISATLHYT----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~  170 (208)
                            .++||++||...+.          +..+...|+.+|++.+.+++.++.++.    +.+..+.|..+..|.....
T Consensus       154 ------~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~  223 (381)
T 1n7h_A          154 ------TVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG----LFACNGILFNHESPRRGEN  223 (381)
T ss_dssp             ------CCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTT
T ss_pred             ------ccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC----CcEEEEEeCceeCCCCCCc
Confidence                  46899999987543          234567899999999999999987763    5555566655554432211


Q ss_pred             CChH---HHHHhhhhh----------hcCCCCCCHHHHHHHHHHhcCCC
Q 028508          171 LAPE---EIRSKATDY----------MAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       171 ~~~~---~~~~~~~~~----------~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ....   .+.......          .....+..++|+|+++++++...
T Consensus       224 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  272 (381)
T 1n7h_A          224 FVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  272 (381)
T ss_dssp             SHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             chhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence            1100   111111111          11224678999999999998754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.52  E-value=1.8e-13  Score=108.74  Aligned_cols=156  Identities=14%  Similarity=0.004  Sum_probs=109.3

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++..+      ...++|+|||+||....      +.++++..+++|+.++..+++++..    .  
T Consensus        68 ~~~~~~~~Dl~d~~~~~~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~--  129 (362)
T 3sxp_A           68 FKGEVIAADINNPLDLRRL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----K--  129 (362)
T ss_dssp             CCSEEEECCTTCHHHHHHH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----T--
T ss_pred             cCceEEECCCCCHHHHHHh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----c--
Confidence            3567899999999998886      23589999999995432      3456789999999999999998842    2  


Q ss_pred             CCCCCCCCceEEEeccccccccC----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          100 GQASSSSGGIIINISATLHYTAT----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                             +++||++||...+...          .+...|+.+|++.+.+++.++.+      +++..++|+.+..|....
T Consensus       130 -------~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~lR~~~v~Gp~~~~  196 (362)
T 3sxp_A          130 -------KAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND------NVQVGLRYFNVYGPREFY  196 (362)
T ss_dssp             -------TCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT------SCEEEEEECSEESTTCGG
T ss_pred             -------CCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc------CCEEEEEeCceeCcCCCC
Confidence                   3459999996544322          23456999999999998877543      667888998888775432


Q ss_pred             C----CChHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCCC
Q 028508          170 K----LAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       170 ~----~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .    .....+........+         ...+..++|+|+++++++...
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~  246 (362)
T 3sxp_A          197 KEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ  246 (362)
T ss_dssp             GGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS
T ss_pred             CCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC
Confidence            2    111122222222211         123567999999999998765

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.51  E-value=6.6e-14  Score=108.93  Aligned_cols=156  Identities=16%  Similarity=0.006  Sum_probs=111.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|.+ +.++++       . |+|||+||...    ...+.++++..+++|+.++..+++++...    +  
T Consensus        44 ~~~~~~~Dl~d~~-~~~~~~-------~-d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--  104 (312)
T 3ko8_A           44 SAELHVRDLKDYS-WGAGIK-------G-DVVFHFAANPE----VRLSTTEPIVHFNENVVATFNVLEWARQT----G--  104 (312)
T ss_dssp             TSEEECCCTTSTT-TTTTCC-------C-SEEEECCSSCS----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----T--
T ss_pred             CceEEECccccHH-HHhhcC-------C-CEEEECCCCCC----chhhhhCHHHHHHHHHHHHHHHHHHHHHc----C--
Confidence            3566889999987 555443       3 99999999543    23456678889999999999999988532    2  


Q ss_pred             CCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            .++||++||...+.           +..+...|+.+|++.+.+++.++.++    |++++.++||.+.+|....
T Consensus       105 ------~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----g~~~~~lrp~~v~g~~~~~  174 (312)
T 3ko8_A          105 ------VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF----GVRCLAVRYANVVGPRLRH  174 (312)
T ss_dssp             ------CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCS
T ss_pred             ------CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccccCcCCCC
Confidence                  46899999987653           23346789999999999999999876    5999999999999886443


Q ss_pred             CCChHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ...............+         ...+..++|+|+++++++..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          175 GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK  219 (312)
T ss_dssp             SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence            2111111111111111         12355699999999999764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.51  E-value=8.7e-13  Score=105.01  Aligned_cols=165  Identities=12%  Similarity=0.041  Sum_probs=114.6

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+++.++++.+     ++|+|||+||....    ..+.++++..+++|+.++..+++++.+...+ .
T Consensus        54 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~  123 (372)
T 1db3_A           54 NPKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-K  123 (372)
T ss_dssp             -CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T
T ss_pred             CCceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C
Confidence            346888999999999999988765     79999999997543    2344567888999999999999998764322 1


Q ss_pred             CCCCCCCCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508           99 RGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                              .++||++||...+..           ..+...|+.+|++.+.+++.++.++.    +.+..+.|..+..|..
T Consensus       124 --------~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~r~~~~~gp~~  191 (372)
T 1db3_A          124 --------KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG----MYACNGILFNHESPRR  191 (372)
T ss_dssp             --------TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTS
T ss_pred             --------CcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHhC----CCeEEEEECCccCCCC
Confidence                    378999999865432           13467899999999999999998763    6666677776665532


Q ss_pred             cCCCChH---HHHHhhhhhh----------cCCCCCCHHHHHHHHHHhcCC
Q 028508          168 VSKLAPE---EIRSKATDYM----------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       168 ~~~~~~~---~~~~~~~~~~----------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      .......   .+........          ....+...+|+|++++.++..
T Consensus       192 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~  242 (372)
T 1db3_A          192 GETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ  242 (372)
T ss_dssp             CTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS
T ss_pred             CCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhc
Confidence            2211111   1111111110          112357889999999998764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.51  E-value=3.2e-13  Score=108.04  Aligned_cols=159  Identities=18%  Similarity=0.074  Sum_probs=113.6

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       ++|+|||+||......   ...++++..+++|+.++..+++++..    .+  
T Consensus        73 ~v~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--  136 (379)
T 2c5a_A           73 CDEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARI----NG--  136 (379)
T ss_dssp             CSEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TT--
T ss_pred             CceEEECCCCCHHHHHHHhC-------CCCEEEECceecCccc---ccccCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            45678899999999888764       7999999999653211   11345788899999999999998853    22  


Q ss_pred             CCCCCCCceEEEeccccccc------------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508          101 QASSSSGGIIINISATLHYT------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                            .++||++||...+.                  +..+...|+.+|++.+.+++.++.+.    |++++.++||.+
T Consensus       137 ------~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v  206 (379)
T 2c5a_A          137 ------IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNI  206 (379)
T ss_dssp             ------CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCE
T ss_pred             ------CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH----CCCEEEEEeCce
Confidence                  36899999976543                  22345689999999999999988765    599999999999


Q ss_pred             cCCCccCCC----ChHHHHHhhhhhh----------cCCCCCCHHHHHHHHHHhcCC
Q 028508          163 KDTAGVSKL----APEEIRSKATDYM----------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       163 ~t~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      .++......    ....+........          ....+...+|+|+++++++..
T Consensus       207 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~  263 (379)
T 2c5a_A          207 YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS  263 (379)
T ss_dssp             ECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred             eCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhc
Confidence            987543211    1112222221111          122456799999999998864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.50  E-value=5.6e-13  Score=107.08  Aligned_cols=121  Identities=17%  Similarity=0.053  Sum_probs=96.5

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +.++.+|++|.+++.+++++    ++++|+|||+||.....    .+.++++..+++|+.++..+++++..    .+   
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~---  135 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HK---  135 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT---
T ss_pred             EEEEECCCCCHHHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hC---
Confidence            78899999999998887763    45699999999965421    13456788999999999999998643    22   


Q ss_pred             CCCCCCceEEEeccccccccCC------------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508          102 ASSSSGGIIINISATLHYTATW------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~------------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                           .++||++||...+....                  +...|+.+|++.+.+++.++.++    |++++.++||.+.
T Consensus       136 -----~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilRp~~v~  206 (397)
T 1gy8_A          136 -----CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNAC  206 (397)
T ss_dssp             -----CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEE
T ss_pred             -----CCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH----CCcEEEEecccee
Confidence                 46899999976543221                  25789999999999999998876    5999999999998


Q ss_pred             CCC
Q 028508          164 DTA  166 (208)
Q Consensus       164 t~~  166 (208)
                      .+.
T Consensus       207 G~~  209 (397)
T 1gy8_A          207 GAH  209 (397)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            774

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.49  E-value=1.1e-12  Score=103.15  Aligned_cols=164  Identities=15%  Similarity=0.073  Sum_probs=112.2

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++.+     ++|+|||+||....    +.+.++++..+++|+.++..+++++... ..   
T Consensus        52 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~---  118 (345)
T 2z1m_A           52 NDVKIIHMDLLEFSNIIRTIEKV-----QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV-KP---  118 (345)
T ss_dssp             TTEEECCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT---
T ss_pred             CceeEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC---
Confidence            35788899999999999988765     79999999996431    1234568889999999999999998742 10   


Q ss_pred             CCCCCCCCceEEEecccccc-----------ccCCchhHHHHhHHHHHHHHHHHHHHhcC--CCCeEEEEeecCcccCCC
Q 028508          100 GQASSSSGGIIINISATLHY-----------TATWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~-----------~~~~~~~~y~~sKaa~~~~~~~la~e~~~--~~gi~v~~v~pG~v~t~~  166 (208)
                             .++||++||...+           .+..+...|+.+|++.+.+++.++.++.-  ..++.++.+.||...+.+
T Consensus       119 -------~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          119 -------DTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFV  191 (345)
T ss_dssp             -------TCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH
T ss_pred             -------CceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcch
Confidence                   2689999998643           23455678999999999999999988630  113445556666655432


Q ss_pred             ccCCCChHHHHHhhhhh---------hcC-CCCCCHHHHHHHHHHhcCCC
Q 028508          167 GVSKLAPEEIRSKATDY---------MAA-YKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       167 ~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~dva~~~~~L~s~~  206 (208)
                      ...  .. .........         .+. ..+..++|+|++++++++..
T Consensus       192 ~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~  238 (345)
T 2z1m_A          192 TRK--IT-YSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP  238 (345)
T ss_dssp             HHH--HH-HHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSS
T ss_pred             hHH--HH-HHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence            100  00 001100000         111 23788999999999998754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.48  E-value=2.6e-13  Score=107.28  Aligned_cols=159  Identities=13%  Similarity=-0.003  Sum_probs=115.7

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       ++|+|||+||....    ....+++...+++|+.++..+++++...    + 
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-  142 (351)
T 3ruf_A           79 SRFCFIEGDIRDLTTCEQVMK-------GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA----Q-  142 (351)
T ss_dssp             TTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CceEEEEccCCCHHHHHHHhc-------CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-
Confidence            468899999999998888765       79999999996432    1234567788999999999999987542    2 


Q ss_pred             CCCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          100 GQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                             -++||++||...+...           .+...|+.+|.+.+.+++.++.+.    |++++.++||.+.+|...
T Consensus       143 -------~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~  211 (351)
T 3ruf_A          143 -------VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY----GFKTIGLRYFNVFGRRQD  211 (351)
T ss_dssp             -------CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECSEESTTCC
T ss_pred             -------CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeeCceeCcCCC
Confidence                   3579999998765432           235679999999999999998765    589999999999987543


Q ss_pred             CCCC----hHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCC
Q 028508          169 SKLA----PEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       169 ~~~~----~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ....    ...+........+         ...+...+|+|+++++++..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  261 (351)
T 3ruf_A          212 PNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA  261 (351)
T ss_dssp             CCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             CCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence            3211    1122222222211         12356789999999988765

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.48  E-value=5.6e-13  Score=105.21  Aligned_cols=123  Identities=11%  Similarity=-0.021  Sum_probs=96.9

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+++.++++..     ++|+|||+||.....    ...++++..+++|+.++..+++++.    +.+
T Consensus        57 ~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~  123 (348)
T 1ek6_A           57 GRSVEFEEMDILDQGALQRLFKKY-----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMK----AHG  123 (348)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHC-----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTT
T ss_pred             CCceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHH----HhC
Confidence            456888999999999998887652     799999999965321    1345678899999999999998754    232


Q ss_pred             CCCCCCCCCceEEEecccccccc------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508           99 RGQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                              .++||++||...+..            .+....|+.+|++.+.+++.++.+ .  .++++..++|+.+..|
T Consensus       124 --------~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          124 --------VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D--KTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             --------CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C--TTCEEEEEEECEEECC
T ss_pred             --------CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C--CCcceEEEeeccccCC
Confidence                    468999999876532            122678999999999999999876 3  2699999999999876

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.47  E-value=3.1e-13  Score=101.27  Aligned_cols=131  Identities=11%  Similarity=0.005  Sum_probs=87.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       .+|+||||+|...           +           ...++.+++.+++.+  
T Consensus        68 ~~~~~~~Dl~d~~~~~~~~~-------~~D~vv~~a~~~~-----------~-----------~~~~~~~~~~~~~~~--  116 (236)
T 3qvo_A           68 NSQIIMGDVLNHAALKQAMQ-------GQDIVYANLTGED-----------L-----------DIQANSVIAAMKACD--  116 (236)
T ss_dssp             TEEEEECCTTCHHHHHHHHT-------TCSEEEEECCSTT-----------H-----------HHHHHHHHHHHHHTT--
T ss_pred             CcEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCc-----------h-----------hHHHHHHHHHHHHcC--
Confidence            57789999999999988876       6899999998411           1           123557777887765  


Q ss_pred             CCCCCCCceEEEeccccccccCCch-------------hHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          101 QASSSSGGIIINISATLHYTATWYQ-------------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~-------------~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                            .++||++||..++.+.+..             ..|..++           ..+. +.||+++.|+||++.++..
T Consensus       117 ------~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~-~~gi~~~~vrPg~i~~~~~  178 (236)
T 3qvo_A          117 ------VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA-----------DAIE-ASGLEYTILRPAWLTDEDI  178 (236)
T ss_dssp             ------CCEEEEECCCCC----------------CGGGHHHHHHH-----------HHHH-TSCSEEEEEEECEEECCSC
T ss_pred             ------CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHH-----------HHHH-HCCCCEEEEeCCcccCCCC
Confidence                  5789999998876654432             2233222           2234 6799999999999988643


Q ss_pred             cCCCChHHHHHhhhhhhc-CCCCCCHHHHHHHHHHhcCCCC
Q 028508          168 VSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ....       ......+ .+++++++|+|+++++|+++++
T Consensus       179 ~~~~-------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          179 IDYE-------LTSRNEPFKGTIVSRKSVAALITDIIDKPE  212 (236)
T ss_dssp             CCCE-------EECTTSCCSCSEEEHHHHHHHHHHHHHSTT
T ss_pred             cceE-------EeccCCCCCCcEECHHHHHHHHHHHHcCcc
Confidence            2210       0111122 3567899999999999998865

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.47  E-value=7.8e-14  Score=103.73  Aligned_cols=154  Identities=10%  Similarity=-0.047  Sum_probs=106.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       ++|+|||++|.....          ...+++|+.++..+++++..    .+ 
T Consensus        46 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~~~----~~-  103 (227)
T 3dhn_A           46 EHLKVKKADVSSLDEVCEVCK-------GADAVISAFNPGWNN----------PDIYDETIKVYLTIIDGVKK----AG-  103 (227)
T ss_dssp             TTEEEECCCTTCHHHHHHHHT-------TCSEEEECCCC----------------CCSHHHHHHHHHHHHHHH----TT-
T ss_pred             CceEEEEecCCCHHHHHHHhc-------CCCEEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHHHH----hC-
Confidence            357788999999999888775       699999999854211          12577899998888888753    22 


Q ss_pred             CCCCCCCCceEEEeccccccccCC----------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          100 GQASSSSGGIIINISATLHYTATW----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~----------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                             .++||++||..+..+.+          +...|+.+|++.+.+.+.++.    ..|++++.++||.+.++....
T Consensus       104 -------~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~----~~~~~~~ilrp~~v~g~~~~~  172 (227)
T 3dhn_A          104 -------VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMK----EKEIDWVFFSPAADMRPGVRT  172 (227)
T ss_dssp             -------CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGG----CCSSEEEEEECCSEEESCCCC
T ss_pred             -------CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh----ccCccEEEEeCCcccCCCccc
Confidence                   35799999987665432          367899999999988888765    347999999999998875432


Q ss_pred             CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          170 KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ............. .....+..++|+|+++++++.++.
T Consensus       173 ~~~~~~~~~~~~~-~~~~~~i~~~Dva~ai~~~l~~~~  209 (227)
T 3dhn_A          173 GRYRLGKDDMIVD-IVGNSHISVEDYAAAMIDELEHPK  209 (227)
T ss_dssp             CCCEEESSBCCCC-TTSCCEEEHHHHHHHHHHHHHSCC
T ss_pred             cceeecCCCcccC-CCCCcEEeHHHHHHHHHHHHhCcc
Confidence            2111000000000 001345789999999999987653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.47  E-value=1.9e-12  Score=103.35  Aligned_cols=164  Identities=13%  Similarity=0.027  Sum_probs=115.2

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++.+     ++|+|||+||....    ..+.++++..+++|+.++..+++++.+.... + 
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~-  147 (375)
T 1t2a_A           79 GNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-  147 (375)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-
T ss_pred             CCceEEEccCCCHHHHHHHHHhc-----CCCEEEECCCcccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-c-
Confidence            35778899999999999888765     79999999996432    1134667889999999999999998764321 1 


Q ss_pred             CCCCCCCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          100 GQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                             .++||++||...+..           ..+...|+.+|++.+.+++.++.++    |+.+..+.|+.+..|...
T Consensus       148 -------~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~~~gp~~~  216 (375)
T 1t2a_A          148 -------SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRG  216 (375)
T ss_dssp             -------TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSC
T ss_pred             -------cceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEecccccCCCCC
Confidence                   368999999876542           2345789999999999999998776    478888888887766432


Q ss_pred             CCCChH---HHHHhhhhh-h---c------CCCCCCHHHHHHHHHHhcCC
Q 028508          169 SKLAPE---EIRSKATDY-M---A------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       169 ~~~~~~---~~~~~~~~~-~---~------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ......   .+....... .   .      ...+...+|+|++++.++..
T Consensus       217 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~  266 (375)
T 1t2a_A          217 ANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN  266 (375)
T ss_dssp             TTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             CCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhc
Confidence            211111   111111111 1   1      12356789999999988754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.46  E-value=6.1e-13  Score=103.84  Aligned_cols=157  Identities=12%  Similarity=0.032  Sum_probs=104.3

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG-FRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ++.++.+|++|.+++.++++       .+|+|||+|+..      +...++ ++..+++|+.|++.+++++.+.   .+ 
T Consensus        54 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~-  116 (322)
T 2p4h_X           54 KLHFFNADLSNPDSFAAAIE-------GCVGIFHTASPI------DFAVSEPEEIVTKRTVDGALGILKACVNS---KT-  116 (322)
T ss_dssp             HEEECCCCTTCGGGGHHHHT-------TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SS-
T ss_pred             ceEEEecCCCCHHHHHHHHc-------CCCEEEEcCCcc------cCCCCChHHHHHHHHHHHHHHHHHHHHhc---CC-
Confidence            46678899999998887765       689999999632      112222 3568999999999999988643   12 


Q ss_pred             CCCCCCCCceEEEeccccccccCC----------------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508          100 GQASSSSGGIIINISATLHYTATW----------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~----------------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                             .++||++||..+..+.+                      ....|+.+|++.+.+++.++.+    +|++++.+
T Consensus       117 -------~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~l  185 (322)
T 2p4h_X          117 -------VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ----NGIDVVTL  185 (322)
T ss_dssp             -------CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH----TTCCEEEE
T ss_pred             -------ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh----cCCcEEEE
Confidence                   46899999987543221                      1116999999877776655432    47999999


Q ss_pred             ecCcccCCCccCCCChHH--HHHhhhhh---hcCC--CCCCHHHHHHHHHHhcCC
Q 028508          158 APGPIKDTAGVSKLAPEE--IRSKATDY---MAAY--KFGEKWDIAMAALYLASD  205 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~--~~~~~~~~---~~~~--~~~~~~dva~~~~~L~s~  205 (208)
                      +||.+++|..........  ........   .+..  .++.++|+|+++++++..
T Consensus       186 rp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~  240 (322)
T 2p4h_X          186 ILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN  240 (322)
T ss_dssp             EECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHS
T ss_pred             cCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhC
Confidence            999999986543222111  00001110   1111  368999999999999864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.46  E-value=7.5e-13  Score=102.04  Aligned_cols=164  Identities=14%  Similarity=0.152  Sum_probs=114.4

Q ss_pred             HHHHHHHHhcCCCeeEE---EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      ..+++.|.+.|.++..+   .+|++|.+++.++++..     ++|+|||+||....    +.+.++++..+++|+.++..
T Consensus        26 ~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~   96 (292)
T 1vl0_A           26 REIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK-----KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKN   96 (292)
T ss_dssp             HHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHH
Confidence            45667776666555544   47999999998888754     79999999996432    12346788999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCC-----------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                      +++++.+.             +.+||++||...+.+..           +...|+.+|++.+.+++.++.        .+
T Consensus        97 l~~a~~~~-------------~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~--------~~  155 (292)
T 1vl0_A           97 LAAAAYSV-------------GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP--------KY  155 (292)
T ss_dssp             HHHHHHHH-------------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS--------SE
T ss_pred             HHHHHHHc-------------CCeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC--------Ce
Confidence            99998752             23799999986554322           456899999999999887532        36


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhh-------cCCCCCCHHHHHHHHHHhcCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ..++|+.+.++ . .. ....+........       ....+..++|+|+++++++.+
T Consensus       156 ~~lR~~~v~G~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  210 (292)
T 1vl0_A          156 YIVRTAWLYGD-G-NN-FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  210 (292)
T ss_dssp             EEEEECSEESS-S-SC-HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             EEEeeeeeeCC-C-cC-hHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhc
Confidence            77889988866 1 11 1111222111111       124567899999999998864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.45  E-value=9.1e-13  Score=105.32  Aligned_cols=159  Identities=10%  Similarity=-0.095  Sum_probs=110.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG-G   98 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~   98 (208)
                      .++.++.+|++|.+++.++++       ++|+|||+||.....    .+.++++..+++|+.++..+++++.    +. +
T Consensus        78 ~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~  142 (377)
T 2q1s_A           78 PAVRFSETSITDDALLASLQD-------EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLK----HFKR  142 (377)
T ss_dssp             TTEEEECSCTTCHHHHHHCCS-------CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHT----TCSS
T ss_pred             CceEEEECCCCCHHHHHHHhh-------CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCC
Confidence            356788999999988776654       799999999964321    2345678899999999999998873    22 2


Q ss_pred             CCCCCCCCCceEEEeccccccc----------------cC-CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           99 RGQASSSSGGIIINISATLHYT----------------AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~----------------~~-~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                              -++||++||...+.                +. .+...|+.+|++.+.+++.++.+.    |++++.++||.
T Consensus       143 --------~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~  210 (377)
T 2q1s_A          143 --------LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH----QLPTVRARFQN  210 (377)
T ss_dssp             --------CCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECC
T ss_pred             --------CCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh----CCCEEEEeecc
Confidence                    46899999976431                22 446789999999999999988765    59999999999


Q ss_pred             ccCCCc---------cC----CCChHHHHHhhhhhhcC---------CCCCCHHHHHHH-HHHhcCC
Q 028508          162 IKDTAG---------VS----KLAPEEIRSKATDYMAA---------YKFGEKWDIAMA-ALYLASD  205 (208)
Q Consensus       162 v~t~~~---------~~----~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~-~~~L~s~  205 (208)
                      +.++..         ..    ......+........+.         ..+...+|+|++ +++++..
T Consensus       211 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~  277 (377)
T 2q1s_A          211 VYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADG  277 (377)
T ss_dssp             EECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHC
T ss_pred             EECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence            998754         11    11111222222222221         234568999999 9988764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.45  E-value=3.4e-12  Score=100.28  Aligned_cols=152  Identities=14%  Similarity=0.024  Sum_probs=106.9

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++.     +++|+|||+||.....     +.++++  +++|+.++..+++++.+    .+  
T Consensus        67 ~~~~~~~Dl~d~~~~~~~~~~-----~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~--  128 (333)
T 2q1w_A           67 NLTFVEGSIADHALVNQLIGD-----LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NN--  128 (333)
T ss_dssp             TEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TT--
T ss_pred             CceEEEEeCCCHHHHHHHHhc-----cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hC--
Confidence            467789999999999888874     2799999999975432     334455  99999999999999875    22  


Q ss_pred             CCCCCCCceEEEeccccccc----cC--------Cch-hHHHHhHHHHHHHHHH-HHHHhcCCCCeEEEEeecCcccCCC
Q 028508          101 QASSSSGGIIINISATLHYT----AT--------WYQ-IHVSAAKAAVDSITRS-LALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~----~~--------~~~-~~y~~sKaa~~~~~~~-la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                            .++||++||...+.    ..        .+. ..|+.+|++.+.+++. ++         ++..++|+.+..|.
T Consensus       129 ------~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~---------~~~ilR~~~v~gp~  193 (333)
T 2q1w_A          129 ------VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL---------DFVTFRLANVVGPR  193 (333)
T ss_dssp             ------CSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC---------CEEEEEESEEESTT
T ss_pred             ------CCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC---------CeEEEeeceEECcC
Confidence                  46899999987654    21        234 7899999999998886 43         46678888888765


Q ss_pred             ccCCCChHHHHHhhhh------hhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          167 GVSKLAPEEIRSKATD------YMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       167 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ..... ...+......      ..+...+..++|+|++++++++..
T Consensus       194 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~  238 (333)
T 2q1w_A          194 NVSGP-LPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGV  238 (333)
T ss_dssp             CCSSH-HHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTC
T ss_pred             CcCcH-HHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcC
Confidence            11111 1111111111      122345678999999999998754

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.45  E-value=9.2e-13  Score=104.45  Aligned_cols=156  Identities=12%  Similarity=0.073  Sum_probs=108.7

Q ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        25 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +.+|+++.+.+..+++.  ..++++|+|||+||....      +.++++..+++|+.++..+++++.+.    +      
T Consensus        94 ~~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~------  155 (357)
T 2x6t_A           94 IADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E------  155 (357)
T ss_dssp             CSEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------
T ss_pred             EeeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----C------
Confidence            44677777777766542  124579999999996543      23457788999999999999998763    2      


Q ss_pred             CCCceEEEeccccccccCC-----------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC---
Q 028508          105 SSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---  170 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~~~-----------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---  170 (208)
                        . +||++||...+...+           +...|+.+|.+.+.+++.++.+    .|++++.++||.+.+|.....   
T Consensus       156 --~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~Gp~~~~~~~~  228 (357)
T 2x6t_A          156 --I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSM  228 (357)
T ss_dssp             --C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCTTCGGG
T ss_pred             --C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEecCeEECCCCCCCccc
Confidence              3 699999987654332           2568999999999999988754    369999999999998754311   


Q ss_pred             -CChHHHHHhhhhh---------hc-CCCCCCHHHHHHHHHHhcCC
Q 028508          171 -LAPEEIRSKATDY---------MA-AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       171 -~~~~~~~~~~~~~---------~~-~~~~~~~~dva~~~~~L~s~  205 (208)
                       .....+.......         .. ...+..++|+|+++++++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~  274 (357)
T 2x6t_A          229 ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  274 (357)
T ss_dssp             SCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhc
Confidence             0011111111111         12 33567899999999998764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.44  E-value=5.6e-12  Score=92.05  Aligned_cols=143  Identities=15%  Similarity=0.117  Sum_probs=100.8

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       .+|++||++|.....   +  +      .++|+.++..+++++..    .+ 
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~~~~~~---~--~------~~~n~~~~~~~~~~~~~----~~-  102 (206)
T 1hdo_A           46 RPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDL---S--P------TTVMSEGARNIVAAMKA----HG-  102 (206)
T ss_dssp             CCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCC---S--C------CCHHHHHHHHHHHHHHH----HT-
T ss_pred             CceEEEEecCCCHHHHHHHHc-------CCCEEEECccCCCCC---C--c------cchHHHHHHHHHHHHHH----hC-
Confidence            357788999999998887764       689999999965431   1  1      12677888887777653    23 


Q ss_pred             CCCCCCCCceEEEeccccccccCC----chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHH
Q 028508          100 GQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE  175 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~----~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~  175 (208)
                             .++||++||...+...+    +...|+.+|++++.+++        ..|++++.++||.+...........  
T Consensus       103 -------~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~--------~~~i~~~~lrp~~~~~~~~~~~~~~--  165 (206)
T 1hdo_A          103 -------VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYTV--  165 (206)
T ss_dssp             -------CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCEE--
T ss_pred             -------CCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHH--------hCCCCEEEEeCCcccCCCCCcceEe--
Confidence                   46799999987665444    67889999999998874        2479999999999842221111100  


Q ss_pred             HHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                         .. ...|.+.+.+++|+|+++++++.++
T Consensus       166 ---~~-~~~~~~~~i~~~Dva~~~~~~~~~~  192 (206)
T 1hdo_A          166 ---TL-DGRGPSRVISKHDLGHFMLRCLTTD  192 (206)
T ss_dssp             ---ES-SSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             ---cc-cCCCCCCccCHHHHHHHHHHHhcCc
Confidence               00 1122246789999999999998764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.43  E-value=6.8e-13  Score=98.37  Aligned_cols=159  Identities=11%  Similarity=-0.033  Sum_probs=100.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.++++++      ...++.++.+|++|.++         +.++++|+|||++|......           ...+|+.
T Consensus        31 ~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~~~-----------~~~~n~~   84 (224)
T 3h2s_A           31 VRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDAVVDALSVPWGSG-----------RGYLHLD   84 (224)
T ss_dssp             ESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSEEEECCCCCTTSS-----------CTHHHHH
T ss_pred             Eecccccccc------cCCCceEEecccccccH---------hhcccCCEEEECCccCCCcc-----------hhhHHHH
Confidence            4565554432      12468889999999988         22358999999999762111           1245777


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc--------------hhHHHHhHHHHHHHHHHHHHHhc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--------------QIHVSAAKAAVDSITRSLALEWG  147 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--------------~~~y~~sKaa~~~~~~~la~e~~  147 (208)
                      ++..+++++    ++.         +++||++||..+..+.+.              ...|+.+|++.+.+ +.+   ..
T Consensus        85 ~~~~l~~a~----~~~---------~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~---~~  147 (224)
T 3h2s_A           85 FATHLVSLL----RNS---------DTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY-QFL---QM  147 (224)
T ss_dssp             HHHHHHHTC----TTC---------CCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-HHH---TT
T ss_pred             HHHHHHHHH----HHc---------CCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH-HHH---Hh
Confidence            765555443    332         378999999876654333              67799999988854 222   23


Q ss_pred             CCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       148 ~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                       ..|++++.++||.+.++......  ...............+..++|+|+++++++.++
T Consensus       148 -~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          148 -NANVNWIGISPSEAFPSGPATSY--VAGKDTLLVGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             -CTTSCEEEEEECSBCCCCCCCCE--EEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             -cCCCcEEEEcCccccCCCcccCc--eecccccccCCCCCceEeHHHHHHHHHHHhcCc
Confidence             56899999999999987322110  000000000111235689999999999998764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.43  E-value=1e-12  Score=102.30  Aligned_cols=166  Identities=13%  Similarity=0.052  Sum_probs=90.4

Q ss_pred             HHHHHHHHhcCCCeeE----------EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIG----------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~----------~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ..+++.|.+.|.++..          +.+|++|.+++.++++..     ++|+|||+||....    +.+.++++..+++
T Consensus        16 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~   86 (315)
T 2ydy_A           16 RAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDF-----QPHVIVHCAAERRP----DVVENQPDAASQL   86 (315)
T ss_dssp             HHHHHHHHTTTCEEEEEC------------------CHHHHHHH-----CCSEEEECC----------------------
T ss_pred             HHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhh-----CCCEEEECCcccCh----hhhhcCHHHHHHH
Confidence            3455566555544433          448999999888887754     79999999997543    1245678889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------CCchhHHHHhHHHHHHHHHHHHHHhcC
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------~~~~~~y~~sKaa~~~~~~~la~e~~~  148 (208)
                      |+.++..+++++.+.             +++||++||...+.+          ..+...|+.+|++.+.+++.++.+   
T Consensus        87 n~~~~~~l~~a~~~~-------------~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---  150 (315)
T 2ydy_A           87 NVDASGNLAKEAAAV-------------GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLG---  150 (315)
T ss_dssp             -CHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTT---
T ss_pred             HHHHHHHHHHHHHHc-------------CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCC---
Confidence            999999999998752             347999999876644          345678999999999999887432   


Q ss_pred             CCCeEEEEeecCcccCCCccC--CCChHHHHHhhh-h-------hhcCCCCCCHHHHHHHHHHhcCC
Q 028508          149 DYAIRVNGIAPGPIKDTAGVS--KLAPEEIRSKAT-D-------YMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       149 ~~gi~v~~v~pG~v~t~~~~~--~~~~~~~~~~~~-~-------~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                           +..++|+.+..+....  .... .+..... .       ..+...+..++|+|+++++++.+
T Consensus       151 -----~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          151 -----AAVLRIPILYGEVEKLEESAVT-VMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             -----CEEEEECSEECSCSSGGGSTTG-GGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             -----eEEEeeeeeeCCCCcccccHHH-HHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHh
Confidence                 2345555555432210  1111 1111111 1       11234677899999999998864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.43  E-value=2.5e-12  Score=101.47  Aligned_cols=113  Identities=11%  Similarity=0.026  Sum_probs=91.2

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +.++.+|++|.+++.++++       ++|+|||+|+...      .+.+.++..+++|+.++..+++++..    .+   
T Consensus        58 ~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~---  117 (347)
T 4id9_A           58 GEEVVGSLEDGQALSDAIM-------GVSAVLHLGAFMS------WAPADRDRMFAVNVEGTRRLLDAASA----AG---  117 (347)
T ss_dssp             CSEEESCTTCHHHHHHHHT-------TCSEEEECCCCCC------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT---
T ss_pred             ccEEecCcCCHHHHHHHHh-------CCCEEEECCcccC------cchhhHHHHHHHHHHHHHHHHHHHHH----cC---
Confidence            4567899999999887765       7999999998643      34556689999999999999998754    22   


Q ss_pred             CCCCCCceEEEecccccccc-------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508          102 ASSSSGGIIINISATLHYTA-------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                           .++||++||...+..             ..+...|+.+|.+.+.+++.++.+.    |++++.++|+.+.
T Consensus       118 -----~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~  183 (347)
T 4id9_A          118 -----VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG----AMETVILRFSHTQ  183 (347)
T ss_dssp             -----CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----SSEEEEEEECEEE
T ss_pred             -----CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc----CCceEEEccceEe
Confidence                 468999999654432             3456789999999999999988764    6999999999998

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.42  E-value=8e-13  Score=100.83  Aligned_cols=146  Identities=14%  Similarity=0.006  Sum_probs=102.0

Q ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        25 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +.+|++|++++.++++.+     ++|+||||||....    +.+.++++..+++|+.++..+++++.+    .       
T Consensus        39 ~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-------   98 (273)
T 2ggs_A           39 YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----I-------   98 (273)
T ss_dssp             EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-------
T ss_pred             ceeccCCHHHHHHHHHhc-----CCCEEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-------
Confidence            579999999999988765     79999999996542    123467889999999999999999864    2       


Q ss_pred             CCCceEEEeccccccccCC----------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChH
Q 028508          105 SSGGIIINISATLHYTATW----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE  174 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~~~----------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~  174 (208)
                        +++||++||...+.+.+          +...|+.+|++.+.+++.    +.      ...++|+.+..+    .....
T Consensus        99 --~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~------~~~iR~~~v~G~----~~~~~  162 (273)
T 2ggs_A           99 --DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ----DD------SLIIRTSGIFRN----KGFPI  162 (273)
T ss_dssp             --TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC----TT------CEEEEECCCBSS----SSHHH
T ss_pred             --CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC----CC------eEEEeccccccc----cHHHH
Confidence              35899999998765433          357899999999998876    22      234555555421    00111


Q ss_pred             HHHHhhhhhhc------CCCCCCHHHHHHHHHHhcCCC
Q 028508          175 EIRSKATDYMA------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       175 ~~~~~~~~~~~------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .+........+      ..++..++|+|+++++++++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          163 YVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR  200 (273)
T ss_dssp             HHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC
Confidence            11111111111      346789999999999998653

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.42  E-value=6.1e-12  Score=99.03  Aligned_cols=164  Identities=15%  Similarity=0.028  Sum_probs=107.9

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++      +++|+|||+||....     .+.++++..+++|+.++..+++++.+...+.+. 
T Consensus        65 ~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~-  132 (342)
T 2hrz_A           65 AVDARAADLSAPGEAEKLVE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY-  132 (342)
T ss_dssp             EEEEEECCTTSTTHHHHHHH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC-
T ss_pred             ceeEEEcCCCCHHHHHHHHh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCC-
Confidence            46678999999999888775      489999999996431     235678899999999999999998775432110 


Q ss_pred             CCCCCCCceEEEeccccccccC-C----------chhHHHHhHHHHHHHHHHHHHHhc-CCCCeEEEEee--cCcccCCC
Q 028508          101 QASSSSGGIIINISATLHYTAT-W----------YQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIA--PGPIKDTA  166 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-~----------~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~v~~v~--pG~v~t~~  166 (208)
                            .++||++||...+.+. +          +...|+.+|++.+.+++.++.+.. +...+|++.+.  ||.+.++.
T Consensus       133 ------~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~  206 (342)
T 2hrz_A          133 ------KPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA  206 (342)
T ss_dssp             ------CCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG
T ss_pred             ------CcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh
Confidence                  3679999999765432 2          567899999999999998876532 01234555554  55543321


Q ss_pred             ccCCCChHHHHHhhhhh----hcCCC-----CCCHHHHHHHHHHhcCC
Q 028508          167 GVSKLAPEEIRSKATDY----MAAYK-----FGEKWDIAMAALYLASD  205 (208)
Q Consensus       167 ~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~dva~~~~~L~s~  205 (208)
                      .  . ....+.......    .+...     +..++|+++++++++..
T Consensus       207 ~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~  251 (342)
T 2hrz_A          207 S--G-FFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMI  251 (342)
T ss_dssp             G--G-HHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHS
T ss_pred             H--H-HHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhc
Confidence            0  0 001111111111    11111     35789999999988753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.42  E-value=5e-12  Score=99.02  Aligned_cols=121  Identities=13%  Similarity=0.038  Sum_probs=95.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.+++++     +++|+|||+||.....    .+.++++..+++|+.++..+++++..    .+  
T Consensus        45 ~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--  109 (330)
T 2c20_A           45 GAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FK--  109 (330)
T ss_dssp             TSEEEECCTTCHHHHHHHHHH-----SCEEEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TT--
T ss_pred             CcEEEECCCCCHHHHHHHHhh-----cCCCEEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cC--
Confidence            456788999999998888765     4899999999965321    13456788999999999999988643    22  


Q ss_pred             CCCCCCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508          101 QASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                            .++||++||...+..           ..+...|+.+|++.+.+++.++.++    |++++.++||.+.++.
T Consensus       110 ------~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          110 ------VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS----NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             ------CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS----SCEEEEEECSEEECCC
T ss_pred             ------CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEecCcccCCC
Confidence                  468999999865532           1245789999999999999988653    6999999999999874

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.40  E-value=1.5e-11  Score=95.94  Aligned_cols=173  Identities=13%  Similarity=0.015  Sum_probs=117.9

Q ss_pred             HHHHHHHHhcCCCeeEE----EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL----EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~----~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      ..+++.|.+.|.+++.+    .+|++|.+++.++++..     ++|+|||+|+.....   ....++++..+++|+.++.
T Consensus        17 ~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~   88 (321)
T 1e6u_A           17 SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASE-----RIDQVYLAAAKVGGI---VANNTYPADFIYQNMMIES   88 (321)
T ss_dssp             HHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhc-----CCCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHH
Confidence            45666676666544433    47999999988887754     799999999964311   1123456788999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------------CCchhHHHHhHHHHHHHHHHHHHHhcC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------------~~~~~~y~~sKaa~~~~~~~la~e~~~  148 (208)
                      .+++++..    .+        -++||++||...+..                .+....|+.+|.+.+.+++.++.+.  
T Consensus        89 ~l~~~~~~----~~--------~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~--  154 (321)
T 1e6u_A           89 NIIHAAHQ----ND--------VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY--  154 (321)
T ss_dssp             HHHHHHHH----TT--------CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHH----hC--------CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh--
Confidence            99988754    22        357999999876531                1223589999999999999988665  


Q ss_pred             CCCeEEEEeecCcccCCCccCCC----ChHHHHHhhhh-------hhc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          149 DYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATD-------YMA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       149 ~~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~-------~~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                        |++++.++||.+.++......    .-..+......       .++       ...+...+|+|++++.++..
T Consensus       155 --~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~  227 (321)
T 1e6u_A          155 --GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL  227 (321)
T ss_dssp             --CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred             --CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhC
Confidence              599999999999987543211    01112222211       111       11345889999999988754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.39  E-value=8.3e-12  Score=97.97  Aligned_cols=161  Identities=13%  Similarity=0.024  Sum_probs=112.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++.+     ++|+|||+||.....    .+.++++..+++|+.++..+++++.+.    +. 
T Consensus        64 ~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-  129 (335)
T 1rpn_A           64 DIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SP-  129 (335)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CT-
T ss_pred             ceEEEECCCCCHHHHHHHHHHc-----CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh----CC-
Confidence            5778899999999999888765     799999999964321    123456788999999999999998653    10 


Q ss_pred             CCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            .++||++||...+...           .+...|+.+|++.+.+++.++.++    |+++..++|+.+..|....
T Consensus       130 ------~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~~  199 (335)
T 1rpn_A          130 ------ETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGI  199 (335)
T ss_dssp             ------TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCT
T ss_pred             ------CCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc----CCcEEEEeeCcccCCCCCC
Confidence                  2679999998655332           235679999999999999998765    4788889999988765332


Q ss_pred             CCChH---HHHHhhhhhh-c---------CCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLAPE---EIRSKATDYM-A---------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~~~---~~~~~~~~~~-~---------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .....   .+........ +         ...+...+|+|++++.++..
T Consensus       200 ~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  248 (335)
T 1rpn_A          200 EFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ  248 (335)
T ss_dssp             TSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS
T ss_pred             CcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhc
Confidence            21111   1111111111 1         11256779999999998754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.38  E-value=8.7e-12  Score=96.84  Aligned_cols=158  Identities=11%  Similarity=-0.091  Sum_probs=111.6

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +.++.+|++|.+++.++++..     ++|+|||+||.....     ..++++..+++|+.++..+++++.+    .+   
T Consensus        47 ~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---  109 (312)
T 2yy7_A           47 GPFEVVNALDFNQIEHLVEVH-----KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KK---  109 (312)
T ss_dssp             SCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TS---
T ss_pred             CceEEecCCCHHHHHHHHhhc-----CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cC---
Confidence            557889999999998887653     799999999964321     2355788899999999999988753    22   


Q ss_pred             CCCCCCceEEEeccccccccC------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          102 ASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                           -++||++||...+...            .+...|+.+|.+.+.+++.++.++    |++++.++||.+.++....
T Consensus       110 -----~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~g~~~~~  180 (312)
T 2yy7_A          110 -----IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY----GVDVRSIRYPGLISWSTPP  180 (312)
T ss_dssp             -----CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEECEEECEEECSSSCC
T ss_pred             -----CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc----CCcEEEEeCCeEecCCCCC
Confidence                 3689999998765431            235689999999999999988765    5999999999999864322


Q ss_pred             CCC-----hHHHHHhhhhh-hc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLA-----PEEIRSKATDY-MA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~-----~~~~~~~~~~~-~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ...     ...+....... .+       ...+...+|+|++++.++..
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  229 (312)
T 2yy7_A          181 GGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKA  229 (312)
T ss_dssp             CSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHS
T ss_pred             CCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhC
Confidence            111     11111111111 11       11235679999999988754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.38  E-value=2.3e-12  Score=95.21  Aligned_cols=148  Identities=11%  Similarity=-0.045  Sum_probs=87.8

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.++         +.+.++|+|||++|.....             ...|+.++..    +++.+++.+ 
T Consensus        42 ~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~~-------------~~~~~~~~~~----l~~a~~~~~-   94 (221)
T 3ew7_A           42 KDINILQKDIFDLTL---------SDLSDQNVVVDAYGISPDE-------------AEKHVTSLDH----LISVLNGTV-   94 (221)
T ss_dssp             SSSEEEECCGGGCCH---------HHHTTCSEEEECCCSSTTT-------------TTSHHHHHHH----HHHHHCSCC-
T ss_pred             CCCeEEeccccChhh---------hhhcCCCEEEECCcCCccc-------------cchHHHHHHH----HHHHHHhcC-
Confidence            357889999999887         2235899999999974310             2235555444    444455543 


Q ss_pred             CCCCCCCCceEEEeccccccccCC------------chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508          100 GQASSSSGGIIINISATLHYTATW------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~------------~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                             .+++|++||..+..+.+            +...|+.+|++.+.+ +.+..  . ..|++++.++||.+.++..
T Consensus        95 -------~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~-~~~~~--~-~~gi~~~ivrp~~v~g~~~  163 (221)
T 3ew7_A           95 -------SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL-EHLKS--H-QAEFSWTYISPSAMFEPGE  163 (221)
T ss_dssp             -------SSEEEEECCCC-------------------CCCSCCHHHHHHHH-HHHHT--T-TTTSCEEEEECSSCCCCC-
T ss_pred             -------CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHH-HHHHh--h-ccCccEEEEeCcceecCCC
Confidence                   57899999987765433            234589999998886 33332  1 4589999999999998722


Q ss_pred             cCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ....... .............+..++|+|++++.++.++
T Consensus       164 ~~~~~~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  201 (221)
T 3ew7_A          164 RTGDYQI-GKDHLLFGSDGNSFISMEDYAIAVLDEIERP  201 (221)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHSC
T ss_pred             ccCceEe-ccccceecCCCCceEeHHHHHHHHHHHHhCc
Confidence            1110000 0000000011124788999999999998654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.35  E-value=8.2e-12  Score=98.26  Aligned_cols=158  Identities=15%  Similarity=0.007  Sum_probs=109.0

Q ss_pred             CeeEEEcCCCCH-HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           21 PAIGLEGDVRKR-EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        21 ~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ++.++.+|++|. +.+.++++       ++|+|||+||...+.    ...++++..+++|+.++..+++++..    .  
T Consensus        46 ~~~~~~~D~~~~~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--  108 (345)
T 2bll_A           46 HFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----Y--  108 (345)
T ss_dssp             TEEEEECCTTTCSHHHHHHHH-------HCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHH----T--
T ss_pred             CeEEEeccccCcHHHHHhhcc-------CCCEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHHH----h--
Confidence            577889999984 55666554       589999999964421    11345678899999999999888753    2  


Q ss_pred             CCCCCCCCceEEEeccccccccC------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508          100 GQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                             +++||++||...+...                  .+...|+.+|.+.+.+++.++.+.    |++++.++||.
T Consensus       109 -------~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~  177 (345)
T 2bll_A          109 -------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFN  177 (345)
T ss_dssp             -------TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECS
T ss_pred             -------CCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc----CCCEEEEcCCc
Confidence                   3579999997654321                  123379999999999999988765    59999999999


Q ss_pred             ccCCCccCCC----C-h---HHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCCC
Q 028508          162 IKDTAGVSKL----A-P---EEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       162 v~t~~~~~~~----~-~---~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +.++......    . .   ..+........+         ...+...+|+|+++++++...
T Consensus       178 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  239 (345)
T 2bll_A          178 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA  239 (345)
T ss_dssp             EECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             ccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhc
Confidence            9987643211    0 0   111111111111         123678999999999988643

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.35  E-value=8.6e-12  Score=95.83  Aligned_cols=166  Identities=11%  Similarity=0.027  Sum_probs=114.7

Q ss_pred             HHHHHHHHhcCCCeeEE---EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      ..+++.|.+.|.++..+   ++|++|.+++.++++..     ++|+|||+||.....    ...++++..+++|+.++..
T Consensus        19 ~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~-----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~   89 (287)
T 3sc6_A           19 KQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEI-----RPHIIIHCAAYTKVD----QAEKERDLAYVINAIGARN   89 (287)
T ss_dssp             HHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhc-----CCCEEEECCcccChH----HHhcCHHHHHHHHHHHHHH
Confidence            34566666656555443   58999999999988765     799999999975421    1224578899999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                      +++++...             +.+||++||...+.+.           .+...|+.+|.+.+.+++.++.        ++
T Consensus        90 l~~~~~~~-------------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--------~~  148 (287)
T 3sc6_A           90 VAVASQLV-------------GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN--------KY  148 (287)
T ss_dssp             HHHHHHHH-------------TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS--------SE
T ss_pred             HHHHHHHc-------------CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC--------Cc
Confidence            99998643             3469999998655322           3456899999999998886532        45


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhc-------CCCCCCHHHHHHHHHHhcCCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +.++||.+.+|....  ....+........+       ...+..++|+|+++++++...
T Consensus       149 ~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  205 (287)
T 3sc6_A          149 FIVRTSWLYGKYGNN--FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTS  205 (287)
T ss_dssp             EEEEECSEECSSSCC--HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSC
T ss_pred             EEEeeeeecCCCCCc--HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCC
Confidence            789999998764321  11112222211111       123556999999999998764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.35  E-value=9.6e-12  Score=96.51  Aligned_cols=173  Identities=11%  Similarity=0.028  Sum_probs=116.3

Q ss_pred             HHHHHHHHhcCC-------CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGI-------PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         9 ~~~~~~l~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      ..+++.|.+.|.       .+..+.+|++|.+++.++++..     ++|+|||+|+.....   ....++....+++|+.
T Consensus        20 ~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~   91 (319)
T 4b8w_A           20 KAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKV-----QPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVH   91 (319)
T ss_dssp             HHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHS-----CCSEEEECCCCCCCH---HHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhc-----CCCEEEECceecccc---cccccCHHHHHHHHHH
Confidence            345566655442       1234578999999999888742     699999999974311   1123445678999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------------CCchhHHHHhHHHHHHHHHHHHHH
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------------TWYQIHVSAAKAAVDSITRSLALE  145 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------------~~~~~~y~~sKaa~~~~~~~la~e  145 (208)
                      ++..+++++..    .+        -.+||++||...+..                .+....|+.+|.+.+.+++.++.+
T Consensus        92 gt~~ll~a~~~----~~--------~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~  159 (319)
T 4b8w_A           92 MNDNVLHSAFE----VG--------ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQ  159 (319)
T ss_dssp             HHHHHHHHHHH----TT--------CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH----cC--------CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            99999988753    22        357999999865421                122336999999999999998876


Q ss_pred             hcCCCCeEEEEeecCcccCCCccCCCC----hHHHHHh----hhhhhc---------CCCCCCHHHHHHHHHHhcCC
Q 028508          146 WGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSK----ATDYMA---------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       146 ~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~----~~~~~~---------~~~~~~~~dva~~~~~L~s~  205 (208)
                      .    |++++.++||.+.+|.......    ...+...    .....+         ...+...+|+|++++.++..
T Consensus       160 ~----~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  232 (319)
T 4b8w_A          160 Y----GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLRE  232 (319)
T ss_dssp             H----CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHH
T ss_pred             h----CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhc
Confidence            5    5899999999999875432211    1111222    111111         11346789999999998764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.34  E-value=4.5e-11  Score=93.05  Aligned_cols=158  Identities=13%  Similarity=0.020  Sum_probs=108.8

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +.++.+|++|.+++.++++.     .++|+|||+|+....     ...++++..+++|+.++..+++++..    .+   
T Consensus        41 ~~~~~~D~~d~~~~~~~~~~-----~~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~---  103 (317)
T 3ajr_A           41 IKFITLDVSNRDEIDRAVEK-----YSIDAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HR---  103 (317)
T ss_dssp             CCEEECCTTCHHHHHHHHHH-----TTCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT---
T ss_pred             ceEEEecCCCHHHHHHHHhh-----cCCcEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cC---
Confidence            45678999999999888764     279999999996432     12355788899999999999998754    22   


Q ss_pred             CCCCCCceEEEeccccccccC------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          102 ASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                           .++||++||...+.+.            .+...|+.+|++.+.+++.++.+.    |++++.++|+.+..+....
T Consensus       104 -----~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~~~g~~~~~  174 (317)
T 3ajr_A          104 -----VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF----GLDVRSLRYPGIISYKAEP  174 (317)
T ss_dssp             -----CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSSSCC
T ss_pred             -----CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc----CCeEEEEecCcEeccCCCC
Confidence                 4689999998765432            146789999999999999887654    5999999987777653221


Q ss_pred             CCC--h---HHHHHhhhhh-hc-------CCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLA--P---EEIRSKATDY-MA-------AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~--~---~~~~~~~~~~-~~-------~~~~~~~~dva~~~~~L~s~  205 (208)
                      ...  .   ..+....... .+       ...+...+|++++++.++..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  223 (317)
T 3ajr_A          175 TAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEA  223 (317)
T ss_dssp             CSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHC
T ss_pred             CCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhC
Confidence            110  1   1111111111 00       11234679999999887643

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.33  E-value=2e-11  Score=94.66  Aligned_cols=156  Identities=12%  Similarity=0.062  Sum_probs=104.2

Q ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        25 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +.+|+++.+.+..+++...  ++++|+|||+||....      ..++++..+++|+.++..+++++...    +      
T Consensus        47 ~~~d~~~~~~~~~~~~~~~--~~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~------  108 (310)
T 1eq2_A           47 IADYMDKEDFLIQIMAGEE--FGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E------  108 (310)
T ss_dssp             CSEEEEHHHHHHHHHTTCC--CSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------
T ss_pred             eccccccHHHHHHHHhccc--cCCCcEEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----C------
Confidence            4467777766665544100  1269999999996543      23346788999999999999988653    2      


Q ss_pred             CCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC---
Q 028508          105 SSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---  170 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~---  170 (208)
                        . +||++||...+...           .+...|+.+|.+.+.+++.++.+    .|++++.++||.+.+|.....   
T Consensus       109 --~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~g~~~~~lrp~~v~G~~~~~~~~~  181 (310)
T 1eq2_A          109 --I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSM  181 (310)
T ss_dssp             --C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCGGGGGG
T ss_pred             --C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeCCcEECcCCCCCCcc
Confidence              3 69999998654322           22567999999999999988754    379999999999998754311   


Q ss_pred             -CChHHHHHhhhhh---------hc-CCCCCCHHHHHHHHHHhcCC
Q 028508          171 -LAPEEIRSKATDY---------MA-AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       171 -~~~~~~~~~~~~~---------~~-~~~~~~~~dva~~~~~L~s~  205 (208)
                       .....+.......         .. ...+...+|+|+++++++..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~  227 (310)
T 1eq2_A          182 ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  227 (310)
T ss_dssp             SCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhc
Confidence             0011111111111         11 23456789999999998754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.33  E-value=1.9e-11  Score=95.10  Aligned_cols=154  Identities=13%  Similarity=0.047  Sum_probs=107.9

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++ .+++.++++       ++|+|||+|+.....        +++..+++|+.++..+++++..    .+  
T Consensus        43 ~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~--  100 (311)
T 3m2p_A           43 DYEYRVSDYT-LEDLINQLN-------DVDAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NN--  100 (311)
T ss_dssp             CCEEEECCCC-HHHHHHHTT-------TCSEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TT--
T ss_pred             ceEEEEcccc-HHHHHHhhc-------CCCEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            4566789999 888877665       799999999976543        2345678899999999888753    22  


Q ss_pred             CCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            -.+||++||...+...           .+...|+.+|.+.+.+++.++.+.    |++++.++||.+.++....
T Consensus       101 ------~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~  170 (311)
T 3m2p_A          101 ------ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKK----GLCIKNLRFAHLYGFNEKN  170 (311)
T ss_dssp             ------CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHS----CCEEEEEEECEEECSCC--
T ss_pred             ------CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc----CCCEEEEeeCceeCcCCCC
Confidence                  3579999997654321           235689999999999999887643    6999999999999875443


Q ss_pred             CCChHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCCC
Q 028508          170 KLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       170 ~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ......+........+         ...+...+|+|+++++++...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          171 NYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             CCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            2111222222222211         113457789999999998765

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.32  E-value=1.1e-11  Score=97.42  Aligned_cols=123  Identities=15%  Similarity=0.042  Sum_probs=93.6

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|++++.++++.     .++|+|||+||.....    ...+++...+++|+.++..+++++..    .+
T Consensus        49 ~~~~~~~~~Dl~~~~~~~~~~~~-----~~~D~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~  115 (338)
T 1udb_A           49 GKHPTFVEGDIRNEALMTEILHD-----HAIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRA----AN  115 (338)
T ss_dssp             TSCCEEEECCTTCHHHHHHHHHH-----TTCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HT
T ss_pred             CCcceEEEccCCCHHHHHHHhhc-----cCCCEEEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHHHh----cC
Confidence            44677899999999999888764     2699999999964321    12345677899999999999887543    22


Q ss_pred             CCCCCCCCCceEEEecccccccc-----------C-CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508           99 RGQASSSSGGIIINISATLHYTA-----------T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~-----------~-~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                              .++||++||...+..           . ++...|+.+|++.+.+++.++.+..   |+++..++|+.+..+
T Consensus       116 --------~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          116 --------VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGA  183 (338)
T ss_dssp             --------CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST---TCEEEEEEECEEECC
T ss_pred             --------CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcC---CCceEEEeeceecCC
Confidence                    468999999865421           1 2367899999999999999987742   689999998877654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.32  E-value=2.9e-13  Score=99.73  Aligned_cols=147  Identities=14%  Similarity=0.051  Sum_probs=99.6

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..+.+|++|.+++.+++         +|+|||++|....      +.++++..+++|+.++..+++++.+    .+   
T Consensus        48 ~~~~~~D~~~~~~~~~~~---------~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~---  105 (215)
T 2a35_A           48 LDNPVGPLAELLPQLDGS---------IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MG---  105 (215)
T ss_dssp             EECCBSCHHHHGGGCCSC---------CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TT---
T ss_pred             ceEEeccccCHHHHHHhh---------hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cC---
Confidence            455677887776655443         8999999996432      2346788899999999999988754    22   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeE-EEEeecCcccCCCccCCCChHHHHHhh
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~-v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                           .++||++||......  +...|+.+|++++.+++.        .|++ ++.++||.+.++........ ......
T Consensus       106 -----~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~~~~~--------~~~~~~~~vrp~~v~g~~~~~~~~~-~~~~~~  169 (215)
T 2a35_A          106 -----ARHYLVVSALGADAK--SSIFYNRVKGELEQALQE--------QGWPQLTIARPSLLFGPREEFRLAE-ILAAPI  169 (215)
T ss_dssp             -----CCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHTT--------SCCSEEEEEECCSEESTTSCEEGGG-GTTCCC
T ss_pred             -----CCEEEEECCcccCCC--CccHHHHHHHHHHHHHHH--------cCCCeEEEEeCceeeCCCCcchHHH-HHHHhh
Confidence                 467999999876643  345799999999888763        3788 99999999998753311100 000000


Q ss_pred             hhhhc-CCCCCCHHHHHHHHHHhcCCC
Q 028508          181 TDYMA-AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       181 ~~~~~-~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ....+ ...+..++|+|+++++++.+.
T Consensus       170 ~~~~~~~~~~i~~~Dva~~~~~~~~~~  196 (215)
T 2a35_A          170 ARILPGKYHGIEACDLARALWRLALEE  196 (215)
T ss_dssp             C----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             hhccCCCcCcEeHHHHHHHHHHHHhcC
Confidence            00000 112457899999999998764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.30  E-value=8.3e-13  Score=103.85  Aligned_cols=158  Identities=13%  Similarity=0.050  Sum_probs=103.4

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       ++|+|||+|+...   ..  ..+..+..+++|+.|+..+++++.+..   + 
T Consensus        59 ~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-  122 (338)
T 2rh8_A           59 GDLKIFRADLTDELSFEAPIA-------GCDFVFHVATPVH---FA--SEDPENDMIKPAIQGVVNVMKACTRAK---S-  122 (338)
T ss_dssp             SCEEEEECCTTTSSSSHHHHT-------TCSEEEEESSCCC---C-----------CHHHHHHHHHHHHHHHHCT---T-
T ss_pred             CcEEEEecCCCChHHHHHHHc-------CCCEEEEeCCccC---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-
Confidence            357789999999988877764       6899999998532   11  112224588999999999999886531   1 


Q ss_pred             CCCCCCCCceEEEeccccccccC---------------------C---chhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508          100 GQASSSSGGIIINISATLHYTAT---------------------W---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~---------------------~---~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                             -++||++||..+..+.                     +   ....|+.+|++.+.+++.++.+.    |++++
T Consensus       123 -------v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~  191 (338)
T 2rh8_A          123 -------VKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN----NIDLI  191 (338)
T ss_dssp             -------CCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH----TCCEE
T ss_pred             -------cCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc----CCcEE
Confidence                   3679999998632210                     0   01159999999888888776543    69999


Q ss_pred             EeecCcccCCCccCCCChHHHHHh----------hh--hhh--cCC--CCCCHHHHHHHHHHhcCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSK----------AT--DYM--AAY--KFGEKWDIAMAALYLASD  205 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~----------~~--~~~--~~~--~~~~~~dva~~~~~L~s~  205 (208)
                      .++||.|++|........ .....          +.  ...  +.+  .+..++|+|+++++++..
T Consensus       192 ~lrp~~v~Gp~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  256 (338)
T 2rh8_A          192 TVIPTLMAGSSLTSDVPS-SIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK  256 (338)
T ss_dssp             EEEECEEESCCSSSSCCH-HHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC
T ss_pred             EEeCCceECCCCCCCCCc-hHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcC
Confidence            999999999865433221 11000          00  000  001  378999999999999864

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.29  E-value=2.5e-11  Score=93.77  Aligned_cols=163  Identities=12%  Similarity=0.003  Sum_probs=109.8

Q ss_pred             HHHHHHHhcCCCeeE-------EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508           10 SAVAALHSLGIPAIG-------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus        10 ~~~~~l~~~~~~~~~-------~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      .+++.|. .|.++..       +.+|++|.+++.++++..     ++|+|||+||.....    ...++++..+++|+.+
T Consensus        15 ~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~   84 (299)
T 1n2s_A           15 ELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVD----KAESEPELAQLLNATS   84 (299)
T ss_dssp             HHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHH
T ss_pred             HHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhc-----CCCEEEECcccCCHh----hhhcCHHHHHHHHHHH
Confidence            4455555 4544433       358999999998887754     699999999964421    1234567889999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                      +..+++++..    .         +.++|++||...+.+.           .+...|+.+|.+.+.+++.++     .  
T Consensus        85 ~~~l~~a~~~----~---------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~-----~--  144 (299)
T 1n2s_A           85 VEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNC-----P--  144 (299)
T ss_dssp             HHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHC-----S--
T ss_pred             HHHHHHHHHH----c---------CCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhC-----C--
Confidence            9999988742    2         2479999998655432           235689999999998887652     2  


Q ss_pred             eEEEEeecCcccCCCccCCCChHHHHHhhhhhhcC-------CCCCCHHHHHHHHHHhcCC
Q 028508          152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-------YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       152 i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dva~~~~~L~s~  205 (208)
                       +++.++||.+.++....  ....+........+.       ..+...+|+|+++++++..
T Consensus       145 -~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          145 -KHLIFRTSWVYAGKGNN--FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             -SEEEEEECSEECSSSCC--HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             -CeEEEeeeeecCCCcCc--HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence             68899999999875321  111222222222111       2345689999999998754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.28  E-value=3.1e-11  Score=96.06  Aligned_cols=158  Identities=15%  Similarity=0.070  Sum_probs=111.8

Q ss_pred             CCeeEEEcCCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           20 IPAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        20 ~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      .++.++.+|++ |.+++.++++       ++|+|||+|+...+.    ...++....+++|+.++..+++++...     
T Consensus        69 ~~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-----  132 (372)
T 3slg_A           69 ERMHFFEGDITINKEWVEYHVK-------KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAVKY-----  132 (372)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHH-----
T ss_pred             CCeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHh-----
Confidence            46788999999 9999888876       599999999975431    123456778899999999999887643     


Q ss_pred             CCCCCCCCCceEEEeccccccccC------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           99 RGQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                              +.+||++||...+...                  .+...|+.+|.+.+.+++.++.    . |++++.++|+
T Consensus       133 --------~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~----~-g~~~~ilRp~  199 (372)
T 3slg_A          133 --------GKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM----E-GLNFTLFRPF  199 (372)
T ss_dssp             --------TCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHT----T-TCEEEEEEEC
T ss_pred             --------CCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHH----C-CCCEEEEccc
Confidence                    2469999997544321                  2444799999999999988764    3 7999999999


Q ss_pred             cccCCCccCCCC--------hHHHHHhhhhhh---------cCCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLA--------PEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .+.+|.......        -..+........         ....+...+|+|+++++++...
T Consensus       200 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  262 (372)
T 3slg_A          200 NWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENS  262 (372)
T ss_dssp             SEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             cccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcc
Confidence            999876432110        111222222221         1113568899999999998654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.27  E-value=5.6e-11  Score=101.56  Aligned_cols=159  Identities=16%  Similarity=0.039  Sum_probs=110.1

Q ss_pred             CCeeEEEcCCCCHHH-HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           20 IPAIGLEGDVRKRED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      .++.++.+|++|.++ +..+++       ++|+|||+||.....    ...++++..+++|+.++..+++++...     
T Consensus       360 ~~v~~v~~Dl~d~~~~~~~~~~-------~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----  423 (660)
T 1z7e_A          360 PHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-----  423 (660)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHH-------HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-----
T ss_pred             CceEEEECCCCCcHHHHHHhhc-------CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh-----
Confidence            357788999999765 555543       589999999965421    123456788999999999998887542     


Q ss_pred             CCCCCCCCCceEEEeccccccccC------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           99 RGQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                              +++||++||...+...                  .+...|+.+|.+.+.+++.++.+.    |++++.++||
T Consensus       424 --------~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRpg  491 (660)
T 1z7e_A          424 --------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPF  491 (660)
T ss_dssp             --------TCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEEC
T ss_pred             --------CCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECCC
Confidence                    3579999997654321                  123479999999999999988765    5999999999


Q ss_pred             cccCCCccC--------CCChHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVS--------KLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~--------~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .+.++....        ......+........+         ...+...+|+|+++++++...
T Consensus       492 ~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  554 (660)
T 1z7e_A          492 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA  554 (660)
T ss_dssp             SEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             cccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCc
Confidence            999875421        0001112222222211         123567999999999988653

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.27  E-value=6.8e-11  Score=93.14  Aligned_cols=153  Identities=11%  Similarity=-0.016  Sum_probs=104.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|+++..            +.++|+|||+||.......    .++++..+++|+.++..+++++...       
T Consensus        76 ~~~~~~~D~~~~~------------~~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~-------  132 (343)
T 2b69_A           76 NFELINHDVVEPL------------YIEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV-------  132 (343)
T ss_dssp             TEEEEECCTTSCC------------CCCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             ceEEEeCccCChh------------hcCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh-------
Confidence            4566777777642            3579999999996542111    1245678899999999999988642       


Q ss_pred             CCCCCCCceEEEeccccccc----------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508          101 QASSSSGGIIINISATLHYT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~----------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                            +.++|++||...+.                +..+...|+.+|++.+.+++.++.+.    |++++.++||.+.+
T Consensus       133 ------~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G  202 (343)
T 2b69_A          133 ------GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFG  202 (343)
T ss_dssp             ------TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEEC
T ss_pred             ------CCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEEEcceeC
Confidence                  24799999976542                23345679999999999999988764    58999999999998


Q ss_pred             CCccCCCC--hHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCCC
Q 028508          165 TAGVSKLA--PEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       165 ~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |.......  ...+........+         ...+...+|+|+++++++...
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  255 (343)
T 2b69_A          203 PRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  255 (343)
T ss_dssp             TTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             cCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence            75432111  1112222111111         123568899999999988653

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.26  E-value=3.2e-11  Score=100.07  Aligned_cols=155  Identities=12%  Similarity=0.015  Sum_probs=106.3

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ..++.++.+|+++++++.        ...++|+|||+|+....       ...+...+++|+.++..+++++..     .
T Consensus       210 ~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~  269 (508)
T 4f6l_B          210 LSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----H  269 (508)
T ss_dssp             STTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----T
T ss_pred             cCceEEEecCCcccccCC--------CccCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----C
Confidence            457999999999988877        34689999999996531       234566788999999999998864     2


Q ss_pred             CCCCCCCCCceEEEeccccc--cc----------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           99 RGQASSSSGGIIINISATLH--YT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~--~~----------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                              ..++|++||...  ..                +..+...|+.+|.+.+.+++.++     ..|++++.++||
T Consensus       270 --------~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~gi~~~ilRp~  336 (508)
T 4f6l_B          270 --------HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAV-----NNGLDGRIVRVG  336 (508)
T ss_dssp             --------TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHH-----HTTCEEEEEEEC
T ss_pred             --------CCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHH-----HcCCCEEEEecc
Confidence                    467999999876  10                01256789999999999988764     247999999999


Q ss_pred             cccCCCccCCCC----hH---HHHHhhhhh--hcC------CCCCCHHHHHHHHHHhcCCC
Q 028508          161 PIKDTAGVSKLA----PE---EIRSKATDY--MAA------YKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       161 ~v~t~~~~~~~~----~~---~~~~~~~~~--~~~------~~~~~~~dva~~~~~L~s~~  206 (208)
                      .|.++.......    ..   .+.......  .|.      ..+...+|+|+++++++...
T Consensus       337 ~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~  397 (508)
T 4f6l_B          337 NLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN  397 (508)
T ss_dssp             CEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBC
T ss_pred             eeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCC
Confidence            999875433211    11   111111111  111      12567899999999998754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.25  E-value=4.7e-11  Score=98.32  Aligned_cols=117  Identities=18%  Similarity=0.028  Sum_probs=87.7

Q ss_pred             CCCeeEEEcCCC------CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVR------KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK   92 (208)
Q Consensus        19 ~~~~~~~~~D~~------~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   92 (208)
                      ..++.++.+|++      +.+++..+++       ++|+|||+||....        +.++..+++|+.++..+++++..
T Consensus       139 ~~~v~~v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~  203 (478)
T 4dqv_A          139 ADRLEVVAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT  203 (478)
T ss_dssp             TTTEEEEECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS
T ss_pred             cCceEEEEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh
Confidence            357899999999      5556666654       69999999997653        22345678999999999988753


Q ss_pred             HHHhcCCCCCCCCCCceEEEeccccccccCCc----------------------hhHHHHhHHHHHHHHHHHHHHhcCCC
Q 028508           93 YLKKGGRGQASSSSGGIIINISATLHYTATWY----------------------QIHVSAAKAAVDSITRSLALEWGTDY  150 (208)
Q Consensus        93 ~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----------------------~~~y~~sKaa~~~~~~~la~e~~~~~  150 (208)
                          .+        ..+||++||...+.....                      ...|+.+|.+.+.+++.++.+.    
T Consensus       204 ----~~--------~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----  267 (478)
T 4dqv_A          204 ----TK--------LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC----  267 (478)
T ss_dssp             ----SS--------CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH----
T ss_pred             ----CC--------CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh----
Confidence                22        357999999765432111                      1339999999999999888754    


Q ss_pred             CeEEEEeecCcccCCC
Q 028508          151 AIRVNGIAPGPIKDTA  166 (208)
Q Consensus       151 gi~v~~v~pG~v~t~~  166 (208)
                      |++++.++||.|.++.
T Consensus       268 gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          268 ALPVAVFRCGMILADT  283 (478)
T ss_dssp             CCCEEEEEECEEECCS
T ss_pred             CCCeEEEECceeeCCC
Confidence            5899999999998764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.16  E-value=2.4e-10  Score=87.63  Aligned_cols=141  Identities=13%  Similarity=0.039  Sum_probs=96.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       ++|+|||+++...       . +      ++|+.++..+++++..    .+  
T Consensus        46 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~~----~~--   98 (287)
T 2jl1_A           46 GVEVRHGDYNQPESLQKAFA-------GVSKLLFISGPHY-------D-N------TLLIVQHANVVKAARD----AG--   98 (287)
T ss_dssp             TCEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCS-------C-H------HHHHHHHHHHHHHHHH----TT--
T ss_pred             CCeEEEeccCCHHHHHHHHh-------cCCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHHH----cC--
Confidence            46788999999998887765       6899999998521       1 1      5688888888887743    32  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                            -++||++||.....   ....|+.+|.+.+.+++.        .|++++.++||.+.++..... .........
T Consensus        99 ------~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~~~~--------~~~~~~ilrp~~~~~~~~~~~-~~~~~~~~~  160 (287)
T 2jl1_A           99 ------VKHIAYTGYAFAEE---SIIPLAHVHLATEYAIRT--------TNIPYTFLRNALYTDFFVNEG-LRASTESGA  160 (287)
T ss_dssp             ------CSEEEEEEETTGGG---CCSTHHHHHHHHHHHHHH--------TTCCEEEEEECCBHHHHSSGG-GHHHHHHTE
T ss_pred             ------CCEEEEECCCCCCC---CCCchHHHHHHHHHHHHH--------cCCCeEEEECCEeccccchhh-HHHHhhCCc
Confidence                  36899999987642   224799999999888752        379999999999876531111 111110000


Q ss_pred             ---hhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          181 ---TDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       181 ---~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                         ........+..++|+|+++++++.++
T Consensus       161 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  189 (287)
T 2jl1_A          161 IVTNAGSGIVNSVTRNELALAAATVLTEE  189 (287)
T ss_dssp             EEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred             eeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence               00112235779999999999998754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.14  E-value=3.6e-10  Score=97.18  Aligned_cols=124  Identities=13%  Similarity=-0.036  Sum_probs=94.3

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+++.++++..     ++|+|||+||......    ..+.....+++|+.++..+++++..    .+
T Consensus        60 ~~~v~~v~~Dl~d~~~l~~~~~~~-----~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~  126 (699)
T 1z45_A           60 KHHIPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YN  126 (699)
T ss_dssp             TSCCCEEECCTTCHHHHHHHHHHS-----CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HT
T ss_pred             CCceEEEEcCCCCHHHHHHHHHhC-----CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHH----cC
Confidence            346778999999999998887643     7999999999654211    1233456789999999999877643    22


Q ss_pred             CCCCCCCCCceEEEecccccccc---------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCccc
Q 028508           99 RGQASSSSGGIIINISATLHYTA---------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~---------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~  163 (208)
                              .++||++||...+..               ..+...|+.+|++++.+++.++.+.  ..|+++..++|+.+.
T Consensus       127 --------~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~g~~~~ilR~~~vy  196 (699)
T 1z45_A          127 --------VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPI  196 (699)
T ss_dssp             --------CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEE
T ss_pred             --------CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc--cCCCcEEEEEecccc
Confidence                    468999999865421               1234689999999999999998775  357999999999888


Q ss_pred             CC
Q 028508          164 DT  165 (208)
Q Consensus       164 t~  165 (208)
                      .+
T Consensus       197 G~  198 (699)
T 1z45_A          197 GA  198 (699)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.08  E-value=6.1e-10  Score=88.58  Aligned_cols=163  Identities=13%  Similarity=-0.075  Sum_probs=113.4

Q ss_pred             HHHHHHHHhcCCCeeEEEcCC-CCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (208)
                      ..+++.|.+.|. +..+.+|. +|.+++.++++       ++|+|||+||...+.        .+...+++|+.++..++
T Consensus        14 ~~l~~~L~~~g~-~~v~~~d~~~d~~~l~~~~~-------~~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~   77 (369)
T 3st7_A           14 KNLKADLTSTTD-HHIFEVHRQTKEEELESALL-------KADFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVL   77 (369)
T ss_dssp             HHHHHHHHHHCC-CEEEECCTTCCHHHHHHHHH-------HCSEEEECCCSBCTT--------CSTTCSSSCCBHHHHHH
T ss_pred             HHHHHHHHhCCC-CEEEEECCCCCHHHHHHHhc-------cCCEEEECCcCCCCC--------CHHHHHHHHHHHHHHHH
Confidence            456667766653 46778899 99999988876       499999999975532        22345667898988888


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                      +++.    +.+.       ..++|++||.....    ...|+.+|.+.+.+++.++.+.    |+++..++|+.+.++..
T Consensus        78 ~a~~----~~~~-------~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~~----g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A           78 DILT----RNTK-------KPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEEY----GNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHT----TCSS-------CCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTC
T ss_pred             HHHH----HhCC-------CCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHHh----CCCEEEEECCceeCCCC
Confidence            8763    2220       24799999987654    5679999999999999988765    48899999999988754


Q ss_pred             cCCCC--hHHHHHhhhhhhcCC--------CCCCHHHHHHHHHHhcCCC
Q 028508          168 VSKLA--PEEIRSKATDYMAAY--------KFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       168 ~~~~~--~~~~~~~~~~~~~~~--------~~~~~~dva~~~~~L~s~~  206 (208)
                      .....  -..+........+..        .+...+|+|++++.++...
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  187 (369)
T 3st7_A          139 KPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT  187 (369)
T ss_dssp             CTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred             CCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence            33211  111222222222111        2456899999999998654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.06  E-value=5.9e-10  Score=86.67  Aligned_cols=139  Identities=8%  Similarity=-0.041  Sum_probs=93.9

Q ss_pred             CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----
Q 028508           48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----  122 (208)
Q Consensus        48 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----  122 (208)
                      ++|+|||+|+........+.    ....++ |+.++..+++++...    +        -.+||++||...+...     
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~----~~~~~~-n~~~~~~ll~a~~~~----~--------v~~~v~~SS~~v~~~~~~~~~  131 (321)
T 3vps_A           69 DVRLVYHLASHKSVPRSFKQ----PLDYLD-NVDSGRHLLALCTSV----G--------VPKVVVGSTCEVYGQADTLPT  131 (321)
T ss_dssp             TEEEEEECCCCCCHHHHTTS----TTTTHH-HHHHHHHHHHHHHHH----T--------CCEEEEEEEGGGGCSCSSSSB
T ss_pred             cCCEEEECCccCChHHHHhC----HHHHHH-HHHHHHHHHHHHHHc----C--------CCeEEEecCHHHhCCCCCCCC
Confidence            79999999997653111111    223455 999999998887543    2        3579999998755322     


Q ss_pred             ------CchhHHHHhHHHHHHHHHHHHHHhcCCCCe-EEEEeecCcccCCCccCCCChHHHHHhhhhhhc---------C
Q 028508          123 ------WYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---------A  186 (208)
Q Consensus       123 ------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~  186 (208)
                            .+...|+.+|.+.+.+++.++.+    .|+ +++.++||.+.+|..........+........+         .
T Consensus       132 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (321)
T 3vps_A          132 PEDSPLSPRSPYAASKVGLEMVAGAHQRA----SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQR  207 (321)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHS----SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCE
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCce
Confidence                  23578999999999999998864    368 999999999998754432212222222222211         1


Q ss_pred             CCCCCHHHHHHHHHHhcCCCC
Q 028508          187 YKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       187 ~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ..+...+|+|+++++++....
T Consensus       208 ~~~v~v~Dva~~~~~~~~~~~  228 (321)
T 3vps_A          208 RDFTYITDVVDKLVALANRPL  228 (321)
T ss_dssp             ECEEEHHHHHHHHHHGGGSCC
T ss_pred             EceEEHHHHHHHHHHHHhcCC
Confidence            134588999999999987653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.00  E-value=4.6e-10  Score=86.00  Aligned_cols=138  Identities=12%  Similarity=0.020  Sum_probs=88.7

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++       ++|+|||++|...                ..|+.++..+++++.    +.+  
T Consensus        45 ~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~----------------~~~~~~~~~l~~a~~----~~~--   95 (286)
T 2zcu_A           45 GITVRQADYGDEAALTSALQ-------GVEKLLLISSSEV----------------GQRAPQHRNVINAAK----AAG--   95 (286)
T ss_dssp             TCEEEECCTTCHHHHHHHTT-------TCSEEEECC------------------------CHHHHHHHHHH----HHT--
T ss_pred             CCeEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCc----------------hHHHHHHHHHHHHHH----HcC--
Confidence            46788999999998887764       6899999998421                025556666655553    333  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                            -++||++||....   +....|+.+|.+.+.+++.        .|++++.++||++.++...  ..........
T Consensus        96 ------~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~~~--------~~~~~~ilrp~~~~~~~~~--~~~~~~~~~~  156 (286)
T 2zcu_A           96 ------VKFIAYTSLLHAD---TSPLGLADEHIETEKMLAD--------SGIVYTLLRNGWYSENYLA--SAPAALEHGV  156 (286)
T ss_dssp             ------CCEEEEEEETTTT---TCCSTTHHHHHHHHHHHHH--------HCSEEEEEEECCBHHHHHT--THHHHHHHTE
T ss_pred             ------CCEEEEECCCCCC---CCcchhHHHHHHHHHHHHH--------cCCCeEEEeChHHhhhhHH--HhHHhhcCCc
Confidence                  4679999998765   2234799999999988763        2699999999988764321  0000000000


Q ss_pred             ---hhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          181 ---TDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       181 ---~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                         ........+..++|+|+++++++.++
T Consensus       157 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  185 (286)
T 2zcu_A          157 FIGAAGDGKIASATRADYAAAAARVISEA  185 (286)
T ss_dssp             EEESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred             eeccCCCCccccccHHHHHHHHHHHhcCC
Confidence               00112235679999999999998753

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.97  E-value=2.1e-10  Score=88.08  Aligned_cols=142  Identities=13%  Similarity=-0.025  Sum_probs=96.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++      +++|+|||+||..         ..+++..+++|+.++..+++++.    +.+  
T Consensus        42 ~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~--  100 (286)
T 3gpi_A           42 GVQTLIADVTRPDTLASIVH------LRPEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAP--  100 (286)
T ss_dssp             TCCEEECCTTCGGGCTTGGG------GCCSEEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSC--
T ss_pred             CCceEEccCCChHHHHHhhc------CCCCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCC--
Confidence            35667899999998887665      3699999999852         23456778889999999888874    222  


Q ss_pred             CCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            .++||++||...+...           .+...|+.+|.+.+.+ +..         ++++.++||.+.++... 
T Consensus       101 ------~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~---------~~~~ilR~~~v~G~~~~-  163 (286)
T 3gpi_A          101 ------LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA---------YSSTILRFSGIYGPGRL-  163 (286)
T ss_dssp             ------CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG---------SSEEEEEECEEEBTTBC-
T ss_pred             ------CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc---------CCeEEEecccccCCCch-
Confidence                  4689999998654322           2366899999998877 431         67899999999877532 


Q ss_pred             CCChHHHHHhhhh------hhcCCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLAPEEIRSKATD------YMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                           .+......      ......+...+|+|+++++++..
T Consensus       164 -----~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  200 (286)
T 3gpi_A          164 -----RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQ  200 (286)
T ss_dssp             -----HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHH
T ss_pred             -----hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhh
Confidence                 11111111      11122356789999999998865

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.89  E-value=2.3e-09  Score=82.71  Aligned_cols=145  Identities=9%  Similarity=-0.096  Sum_probs=89.9

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|++++.++++       ++|+|||+++.....            ..+.|+.++..++++    +.+.+  
T Consensus        52 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~a----a~~~g--  106 (299)
T 2wm3_A           52 GAEVVQGDQDDQVIMELALN-------GAYATFIVTNYWESC------------SQEQEVKQGKLLADL----ARRLG--  106 (299)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCHHHHT------------CHHHHHHHHHHHHHH----HHHHT--
T ss_pred             CCEEEEecCCCHHHHHHHHh-------cCCEEEEeCCCCccc------------cchHHHHHHHHHHHH----HHHcC--
Confidence            47788999999999887765       699999999843210            123344444444444    44443  


Q ss_pred             CCCCCCCceEEEeccccccc--cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508          101 QASSSSGGIIINISATLHYT--ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                            -++||++|+.....  .......|+.+|.+++.+++.        .|++++.++||++.++........ ....
T Consensus       107 ------v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~--------~gi~~~ilrp~~~~~~~~~~~~~~-~~~~  171 (299)
T 2wm3_A          107 ------LHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD--------IGVPMTSVRLPCYFENLLSHFLPQ-KAPD  171 (299)
T ss_dssp             ------CSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH--------HTCCEEEEECCEEGGGGGTTTCCE-ECTT
T ss_pred             ------CCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH--------CCCCEEEEeecHHhhhchhhcCCc-ccCC
Confidence                  46799966644322  112246799999999888763        268999999999988743211110 0000


Q ss_pred             h--hhhhhc----CCCCCCHHHHHHHHHHhcCC
Q 028508          179 K--ATDYMA----AYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       179 ~--~~~~~~----~~~~~~~~dva~~~~~L~s~  205 (208)
                      .  ..-..|    ...+..++|+|++++.++.+
T Consensus       172 g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (299)
T 2wm3_A          172 GKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM  204 (299)
T ss_dssp             SSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS
T ss_pred             CCEEEEEecCCCCccceecHHHHHHHHHHHHcC
Confidence            0  000011    11356889999999998864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.87  E-value=6.1e-09  Score=79.95  Aligned_cols=137  Identities=12%  Similarity=-0.055  Sum_probs=83.6

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|++++.++++       ++|+|||++|....       .       ..|+.++..+++    .+.+.+  
T Consensus        45 ~v~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~-------~-------~~~~~~~~~l~~----aa~~~g--   97 (289)
T 3e48_A           45 KVSVRQLDYFNQESMVEAFK-------GMDTVVFIPSIIHP-------S-------FKRIPEVENLVY----AAKQSG--   97 (289)
T ss_dssp             TBEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCS-------H-------HHHHHHHHHHHH----HHHHTT--
T ss_pred             CCEEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCcc-------c-------hhhHHHHHHHHH----HHHHcC--
Confidence            56788999999998887764       79999999985431       1       124555544444    444443  


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~  180 (208)
                            -++||++||.......+.    ..++..     ..+...+. ..|++++.++||++.++...      ......
T Consensus        98 ------v~~iv~~Ss~~~~~~~~~----~~~~~~-----~~~e~~~~-~~g~~~~ilrp~~~~~~~~~------~~~~~~  155 (289)
T 3e48_A           98 ------VAHIIFIGYYADQHNNPF----HMSPYF-----GYASRLLS-TSGIDYTYVRMAMYMDPLKP------YLPELM  155 (289)
T ss_dssp             ------CCEEEEEEESCCSTTCCS----TTHHHH-----HHHHHHHH-HHCCEEEEEEECEESTTHHH------HHHHHH
T ss_pred             ------CCEEEEEcccCCCCCCCC----ccchhH-----HHHHHHHH-HcCCCEEEEeccccccccHH------HHHHHH
Confidence                  468999999764433322    222211     11222233 45799999999999876321      111111


Q ss_pred             hhh---hcCCC----CCCHHHHHHHHHHhcCCC
Q 028508          181 TDY---MAAYK----FGEKWDIAMAALYLASDA  206 (208)
Q Consensus       181 ~~~---~~~~~----~~~~~dva~~~~~L~s~~  206 (208)
                      ...   .+.+.    +..++|+|+++++++.+.
T Consensus       156 ~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~  188 (289)
T 3e48_A          156 NMHKLIYPAGDGRINYITRNDIARGVIAIIKNP  188 (289)
T ss_dssp             HHTEECCCCTTCEEEEECHHHHHHHHHHHHHCG
T ss_pred             HCCCEecCCCCceeeeEEHHHHHHHHHHHHcCC
Confidence            111   12222    568999999999998764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.76  E-value=2.1e-08  Score=77.44  Aligned_cols=139  Identities=15%  Similarity=0.099  Sum_probs=83.3

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|.+++.++++       ++|+|||++|...                   +.+...+++++    .+.+. 
T Consensus        56 ~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~-  104 (307)
T 2gas_A           56 GVILLEGDINDHETLVKAIK-------QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGN-  104 (307)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCC-
T ss_pred             CCEEEEeCCCCHHHHHHHHh-------CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCC-
Confidence            47789999999998887765       6999999998532                   22333444443    33220 


Q ss_pred             CCCCCCCceEEEecccccc-----ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC---
Q 028508          101 QASSSSGGIIINISATLHY-----TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---  172 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~-----~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~---  172 (208)
                            -++|| .|+....     ...+....| .+|.+++.+++.        .|++++.++||++.++.......   
T Consensus       105 ------v~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~i~~~~lrp~~~~~~~~~~~~~~~~  168 (307)
T 2gas_A          105 ------VKKFF-PSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA--------EGVPYTYLCCHAFTGYFLRNLAQLDA  168 (307)
T ss_dssp             ------CSEEE-CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEETTTTGGGTTCTTC
T ss_pred             ------ceEEe-ecccccCcccccCCCcchhHH-HHHHHHHHHHHH--------cCCCeEEEEcceeecccccccccccc
Confidence                  14566 3433211     123345678 999998887752        26889999999998754321110   


Q ss_pred             ---hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          173 ---PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       173 ---~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                         ................+..++|+|++++.++.++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (307)
T 2gas_A          169 TDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDP  205 (307)
T ss_dssp             SSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCG
T ss_pred             ccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCc
Confidence               0000000001111224568999999999998754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.76  E-value=3.8e-08  Score=75.33  Aligned_cols=137  Identities=9%  Similarity=-0.105  Sum_probs=85.6

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK--GG   98 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~   98 (208)
                      ++.++.+|++|.+            +.++|+|||+|+.....     .  ..              ++.++..+.+  .+
T Consensus        48 ~~~~~~~D~~d~~------------~~~~d~vi~~a~~~~~~-----~--~~--------------~~~l~~a~~~~~~~   94 (286)
T 3ius_A           48 GAEPLLWPGEEPS------------LDGVTHLLISTAPDSGG-----D--PV--------------LAALGDQIAARAAQ   94 (286)
T ss_dssp             TEEEEESSSSCCC------------CTTCCEEEECCCCBTTB-----C--HH--------------HHHHHHHHHHTGGG
T ss_pred             CCeEEEecccccc------------cCCCCEEEECCCccccc-----c--HH--------------HHHHHHHHHhhcCC
Confidence            4788899999833            35899999999864421     1  11              1223333333  22


Q ss_pred             CCCCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCc
Q 028508           99 RGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~  167 (208)
                              -.+||++||...+...           .+...|+.+|.+.+.+++.+       .|++++.++||.+.++..
T Consensus        95 --------~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~-------~~~~~~ilRp~~v~G~~~  159 (286)
T 3ius_A           95 --------FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV-------PNLPLHVFRLAGIYGPGR  159 (286)
T ss_dssp             --------CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS-------TTCCEEEEEECEEEBTTB
T ss_pred             --------ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh-------cCCCEEEEeccceECCCc
Confidence                    3679999998654321           23457999999999888865       378999999999988753


Q ss_pred             cCCCC--hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          168 VSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       168 ~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .....  ..... ..........+...+|+|+++++++...
T Consensus       160 ~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~~~~~~  199 (286)
T 3ius_A          160 GPFSKLGKGGIR-RIIKPGQVFSRIHVEDIAQVLAASMARP  199 (286)
T ss_dssp             SSSTTSSSSCCC-EEECTTCCBCEEEHHHHHHHHHHHHHSC
T ss_pred             hHHHHHhcCCcc-ccCCCCcccceEEHHHHHHHHHHHHhCC
Confidence            22100  00000 0000012234567899999999998654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.70  E-value=2.3e-07  Score=77.02  Aligned_cols=167  Identities=16%  Similarity=0.044  Sum_probs=102.2

Q ss_pred             HHHHHHHHhcCCCeeE----------EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIG----------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~----------~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ..+++.|.+.|.++..          +.+|+.+.         ..+.+.++|+|||+||.....   ..+.+.....+++
T Consensus       161 ~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~---------~~~~l~~~D~Vih~A~~~~~~---~~~~~~~~~~~~~  228 (516)
T 3oh8_A          161 RALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNP---------ASDLLDGADVLVHLAGEPIFG---RFNDSHKEAIRES  228 (516)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSC---------CTTTTTTCSEEEECCCC--------CCGGGHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEECCCCCccceeecccch---------hHHhcCCCCEEEECCCCcccc---ccchhHHHHHHHH
Confidence            3456666665544433          34565532         123345899999999975432   3456678889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-c----------CCchhHHHHhHHHHHHHHHHHHHHhc
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-A----------TWYQIHVSAAKAAVDSITRSLALEWG  147 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~----------~~~~~~y~~sKaa~~~~~~~la~e~~  147 (208)
                      |+.++..+++++.   ...+        .++||++||...+. .          ..+...|+.+|...+.+.+.    ..
T Consensus       229 Nv~gt~~ll~a~a---~~~~--------~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~----~~  293 (516)
T 3oh8_A          229 RVLPTKFLAELVA---ESTQ--------CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAP----AS  293 (516)
T ss_dssp             THHHHHHHHHHHH---HCSS--------CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHH----HH
T ss_pred             HHHHHHHHHHHHH---hcCC--------CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHH----HH
Confidence            9999999999754   2222        46899999976543 1          11345678888776655443    23


Q ss_pred             CCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhh--------hcCCCCCCHHHHHHHHHHhcCCC
Q 028508          148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       148 ~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                       ..|++++.++||.+.++...   ....+.......        .....+...+|+|+++++++...
T Consensus       294 -~~gi~~~ilRp~~v~Gp~~~---~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  356 (516)
T 3oh8_A          294 -DAGKRVAFIRTGVALSGRGG---MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDA  356 (516)
T ss_dssp             -HTTCEEEEEEECEEEBTTBS---HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCT
T ss_pred             -hCCCCEEEEEeeEEECCCCC---hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCc
Confidence             45899999999999987521   011111111111        01123467899999999998653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.67  E-value=8e-08  Score=75.64  Aligned_cols=143  Identities=16%  Similarity=0.129  Sum_probs=91.7

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.+++++.     ++|+|||++|..                   |+.++..+++++...    +.
T Consensus        60 ~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~Vi~~a~~~-------------------n~~~~~~l~~aa~~~----g~  111 (346)
T 3i6i_A           60 KGAIIVYGLINEQEAMEKILKEH-----EIDIVVSTVGGE-------------------SILDQIALVKAMKAV----GT  111 (346)
T ss_dssp             TTCEEEECCTTCHHHHHHHHHHT-----TCCEEEECCCGG-------------------GGGGHHHHHHHHHHH----CC
T ss_pred             CCcEEEEeecCCHHHHHHHHhhC-----CCCEEEECCchh-------------------hHHHHHHHHHHHHHc----CC
Confidence            35788999999999998888652     799999999861                   777777777776542    10


Q ss_pred             CCCCCCCCceEEEeccccccc----cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHH
Q 028508          100 GQASSSSGGIIINISATLHYT----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE  175 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~----~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~  175 (208)
                             -.++|+ |+.....    +..+...|+.+|.+.+.+.+.        .|++++.++||.+.+...........
T Consensus       112 -------v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~--------~g~~~tivrpg~~~g~~~~~~~~~~~  175 (346)
T 3i6i_A          112 -------IKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEE--------SGIPFTYICCNSIASWPYYNNIHPSE  175 (346)
T ss_dssp             -------CSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH--------TTCCBEEEECCEESSCCCSCC-----
T ss_pred             -------ceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHH--------cCCCEEEEEecccccccCcccccccc
Confidence                   134554 5443221    235667899999998877763        36899999999887643221111000


Q ss_pred             ------HHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          176 ------IRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       176 ------~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                            .............+...+|+|+++++++.++
T Consensus       176 ~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          176 VLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred             ccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence                  0000001111223678899999999998764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.60  E-value=1.5e-06  Score=68.62  Aligned_cols=154  Identities=12%  Similarity=0.001  Sum_probs=93.5

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+++.++++..    +++|+|||+||...         ++++..+++|+.++..+++++.+...  +  
T Consensus        49 ~~~~~~~Dl~d~~~~~~~~~~~----~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~--  111 (364)
T 2v6g_A           49 PINYVQCDISDPDDSQAKLSPL----TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--N--  111 (364)
T ss_dssp             CCEEEECCTTSHHHHHHHHTTC----TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--T--
T ss_pred             ceEEEEeecCCHHHHHHHHhcC----CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--c--
Confidence            5678899999999888776522    24999999999642         23567889999999999998764310  1  


Q ss_pred             CCCCCCCceEE-------EeccccccccC--------------CchhHHHHhHHHHHHHHHHHHHHhcCCCC-eEEEEee
Q 028508          101 QASSSSGGIII-------NISATLHYTAT--------------WYQIHVSAAKAAVDSITRSLALEWGTDYA-IRVNGIA  158 (208)
Q Consensus       101 ~~~~~~~~~iv-------~iss~~~~~~~--------------~~~~~y~~sKaa~~~~~~~la~e~~~~~g-i~v~~v~  158 (208)
                            -.++|       ++||...+...              +....|.    +.+.+++.++.    .+| +++..++
T Consensus       112 ------~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~----~~~~~~~~ilR  177 (364)
T 2v6g_A          112 ------LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE----KKEGLTWSVHR  177 (364)
T ss_dssp             ------CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT----TSTTCEEEEEE
T ss_pred             ------cceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhH----HHHHHHHHHhh----cCCCceEEEEC
Confidence                  23565       78887543211              1133452    23334443331    345 9999999


Q ss_pred             cCcccCCCccCCCCh--HH-HHHhh--hhhhcCC------------CCCCHHHHHHHHHHhcCC
Q 028508          159 PGPIKDTAGVSKLAP--EE-IRSKA--TDYMAAY------------KFGEKWDIAMAALYLASD  205 (208)
Q Consensus       159 pG~v~t~~~~~~~~~--~~-~~~~~--~~~~~~~------------~~~~~~dva~~~~~L~s~  205 (208)
                      |+.+..+........  .. +....  ....+..            ...+.+|+|++++.++..
T Consensus       178 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~  241 (364)
T 2v6g_A          178 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVD  241 (364)
T ss_dssp             ESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHC
T ss_pred             CCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhC
Confidence            999998754422210  11 11212  1121111            223448899999988754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.59  E-value=9.4e-08  Score=74.01  Aligned_cols=144  Identities=14%  Similarity=0.075  Sum_probs=86.0

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++       ++|+|||+++.....               .|+.++..+++++    .+.+.
T Consensus        55 ~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~  108 (313)
T 1qyd_A           55 LGAKLIEASLDDHQRLVDALK-------QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGN  108 (313)
T ss_dssp             TTCEEECCCSSCHHHHHHHHT-------TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCC
T ss_pred             CCeEEEeCCCCCHHHHHHHHh-------CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCC
Confidence            357889999999999887765       699999999965431               1455555555554    33320


Q ss_pred             CCCCCCCCceEEEecccccccc------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC-
Q 028508          100 GQASSSSGGIIINISATLHYTA------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-  172 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~-  172 (208)
                             -++||+ |+......      .+....| .+|.+++.+++        ..|++++.++||++.++....... 
T Consensus       109 -------v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~--------~~g~~~~ilrp~~~~~~~~~~~~~~  171 (313)
T 1qyd_A          109 -------IKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIE--------AASIPYTYVSSNMFAGYFAGSLAQL  171 (313)
T ss_dssp             -------CSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHH--------HTTCCBCEEECCEEHHHHTTTSSCT
T ss_pred             -------CceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHH--------hcCCCeEEEEeceeccccccccccc
Confidence                   145764 44332111      2345678 99999887765        236888899999887542211100 


Q ss_pred             ------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          173 ------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       173 ------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                            ................+..++|+|++++.++.++
T Consensus       172 ~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~  211 (313)
T 1qyd_A          172 DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  211 (313)
T ss_dssp             TCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             cccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCc
Confidence                  0000000000111123568899999999988754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.47  E-value=1.4e-06  Score=68.77  Aligned_cols=143  Identities=13%  Similarity=0.066  Sum_probs=87.4

Q ss_pred             CeeEEEcC-CCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           21 PAIGLEGD-VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        21 ~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ++..+.+| ++|.+++.++++       .+|+||||++...      .         +.|..+ ..+++++    .+.+.
T Consensus        52 ~v~~v~~D~l~d~~~l~~~~~-------~~d~Vi~~a~~~~------~---------~~~~~~-~~l~~aa----~~~g~  104 (352)
T 1xgk_A           52 NVTLFQGPLLNNVPLMDTLFE-------GAHLAFINTTSQA------G---------DEIAIG-KDLADAA----KRAGT  104 (352)
T ss_dssp             TEEEEESCCTTCHHHHHHHHT-------TCSEEEECCCSTT------S---------CHHHHH-HHHHHHH----HHHSC
T ss_pred             CcEEEECCccCCHHHHHHHHh-------cCCEEEEcCCCCC------c---------HHHHHH-HHHHHHH----HHcCC
Confidence            57788999 999999888764       6899999987532      0         123333 4444443    33310


Q ss_pred             CCCCCCCCceEEEecccc-ccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCC--ChHH-
Q 028508          100 GQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEE-  175 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~-~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~-  175 (208)
                             -++||++||.. ...+......|+.+|++.+.+++.        .|++++.++||++.++......  .... 
T Consensus       105 -------v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~--------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~  169 (352)
T 1xgk_A          105 -------IQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ--------LGLPSTFVYAGIYNNNFTSLPYPLFQMEL  169 (352)
T ss_dssp             -------CSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT--------SSSCEEEEEECEEGGGCBSSSCSSCBEEE
T ss_pred             -------ccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH--------cCCCEEEEecceecCCchhcccccccccc
Confidence                   15799999986 344444556799999999988863        3789999999976543221100  0000 


Q ss_pred             -HHHhhhhhhc-----CCCCCCH-HHHHHHHHHhcCC
Q 028508          176 -IRSKATDYMA-----AYKFGEK-WDIAMAALYLASD  205 (208)
Q Consensus       176 -~~~~~~~~~~-----~~~~~~~-~dva~~~~~L~s~  205 (208)
                       .........+     ...+..+ +|+|++++.++.+
T Consensus       170 ~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~  206 (352)
T 1xgk_A          170 MPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD  206 (352)
T ss_dssp             CTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH
T ss_pred             cCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhC
Confidence             0000000001     1124577 8999999998864

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.46  E-value=9e-08  Score=74.46  Aligned_cols=138  Identities=13%  Similarity=0.086  Sum_probs=80.3

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.++..+++++    .+.+. 
T Consensus        57 ~v~~v~~D~~d~~~l~~a~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~-  105 (321)
T 3c1o_A           57 GVTIIEGEMEEHEKMVSVLK-------QVDIVISALPFPM-------------------ISSQIHIINAI----KAAGN-  105 (321)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCC-
T ss_pred             CcEEEEecCCCHHHHHHHHc-------CCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCC-
Confidence            47889999999999888765       6999999998532                   22333333333    33320 


Q ss_pred             CCCCCCCceEEEeccccccc------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC--C--
Q 028508          101 QASSSSGGIIINISATLHYT------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS--K--  170 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~--~--  170 (208)
                            -++|| .|+ .+..      ..+....| .+|.+++.+++.        .|++++.++||++.++....  .  
T Consensus       106 ------v~~~v-~S~-~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~lrp~~~~~~~~~~~~~~~  168 (321)
T 3c1o_A          106 ------IKRFL-PSD-FGCEEDRIKPLPPFESVL-EKKRIIRRAIEA--------AALPYTYVSANCFGAYFVNYLLHPS  168 (321)
T ss_dssp             ------CCEEE-CSC-CSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEEHHHHHHHHHCCC
T ss_pred             ------ccEEe-ccc-cccCccccccCCCcchHH-HHHHHHHHHHHH--------cCCCeEEEEeceecccccccccccc
Confidence                  14566 343 3311      11235679 999999888763        25778889999886532100  0  


Q ss_pred             --CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          171 --LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       171 --~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                        .........+........+..++|+|+++++++.++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  206 (321)
T 3c1o_A          169 PHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDP  206 (321)
T ss_dssp             SSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCG
T ss_pred             ccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCc
Confidence              000000000001111223568899999999988653

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.37  E-value=2.1e-07  Score=72.35  Aligned_cols=139  Identities=15%  Similarity=0.142  Sum_probs=79.2

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|.+++.++++       ++|+|||+++...                   +.+...++++    +.+.+. 
T Consensus        59 ~v~~v~~Dl~d~~~l~~a~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~-  107 (318)
T 2r6j_A           59 GAIIVKGELDEHEKLVELMK-------KVDVVISALAFPQ-------------------ILDQFKILEA----IKVAGN-  107 (318)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCGGG-------------------STTHHHHHHH----HHHHCC-
T ss_pred             CCEEEEecCCCHHHHHHHHc-------CCCEEEECCchhh-------------------hHHHHHHHHH----HHhcCC-
Confidence            47789999999999888775       6999999998532                   1223333333    333320 


Q ss_pred             CCCCCCCceEEEeccccccc-----cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc---CCCC
Q 028508          101 QASSSSGGIIINISATLHYT-----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV---SKLA  172 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~-----~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~---~~~~  172 (208)
                            -++||+ |+.....     ..+....| .+|.+++.+++.        .|++++.++||++..+...   ....
T Consensus       108 ------v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~lr~~~~~~~~~~~~~~~~~  171 (318)
T 2r6j_A          108 ------IKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEE--------ANIPYTYVSANCFASYFINYLLRPYD  171 (318)
T ss_dssp             ------CCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH--------TTCCBEEEECCEEHHHHHHHHHCTTC
T ss_pred             ------CCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHh--------cCCCeEEEEcceehhhhhhhhccccC
Confidence                  145663 4433111     11234568 999998877753        3688888999987643110   0000


Q ss_pred             hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ................+..++|+|++++.++.++
T Consensus       172 ~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (318)
T 2r6j_A          172 PKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP  205 (318)
T ss_dssp             CCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred             CCCceEEecCCCceeeEeeHHHHHHHHHHHhcCc
Confidence            0000000000111223567899999999998754

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.35  E-value=3.4e-07  Score=70.69  Aligned_cols=140  Identities=14%  Similarity=0.032  Sum_probs=81.3

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ..+..+.+|++|.+++.++++       ++|+|||+++...                   +.+...+++++    ++.+.
T Consensus        56 ~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~  105 (308)
T 1qyc_A           56 SGANIVHGSIDDHASLVEAVK-------NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGT  105 (308)
T ss_dssp             TTCEEECCCTTCHHHHHHHHH-------TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCC
T ss_pred             CCCEEEEeccCCHHHHHHHHc-------CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCC
Confidence            357889999999999888775       6999999998532                   22333334433    33320


Q ss_pred             CCCCCCCCceEEEeccccccc-----cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC--
Q 028508          100 GQASSSSGGIIINISATLHYT-----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--  172 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-----~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--  172 (208)
                             -++|| .|+.....     ..+....| .+|.+++.+++.        .|++++.++||++.++.......  
T Consensus       106 -------v~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~~r~~~~~~~~~~~~~~~~  168 (308)
T 1qyc_A          106 -------VKRFF-PSEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA--------EGIPYTYVSSNCFAGYFLRSLAQAG  168 (308)
T ss_dssp             -------CSEEE-CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEEHHHHTTTTTCTT
T ss_pred             -------CceEe-ecccccCccccccCCcchhHH-HHHHHHHHHHHh--------cCCCeEEEEeceecccccccccccc
Confidence                   14566 34433221     12335678 999998877763        25778889999886542211100  


Q ss_pred             ----hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          173 ----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       173 ----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                          ................+..++|+|++++.++.++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  206 (308)
T 1qyc_A          169 LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  206 (308)
T ss_dssp             CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCc
Confidence                0000000001111123567899999999988754

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.97  E-value=8.1e-06  Score=56.93  Aligned_cols=47  Identities=23%  Similarity=0.270  Sum_probs=41.5

Q ss_pred             HHHHHHhcCCCeeEEEcCCCCH--HHHHHHHHHHHHHhCCccEEEeCCCC
Q 028508           11 AVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTINHFGKLDILVNAAAG   58 (208)
Q Consensus        11 ~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~~ag~   58 (208)
                      +.+.+.+.|.++..+++|++++  +++.++++.+.+.+|+ |++|||+|+
T Consensus        59 ~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg  107 (157)
T 3gxh_A           59 EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLAN  107 (157)
T ss_dssp             HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBS
T ss_pred             HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCC
Confidence            4556666788888999999999  9999999999998999 999999995

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.77  E-value=0.00047  Score=52.74  Aligned_cols=177  Identities=12%  Similarity=-0.017  Sum_probs=97.6

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (208)
                      ..+++.|.+.|-+++.+.=+-.. ..+. .-+...+.+..+|.+||.||..........+.+.....++.|+.++..+.+
T Consensus        14 ~~L~~~L~~~G~~V~~l~R~~~~-~~~~-~~~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~   91 (298)
T 4b4o_A           14 TALTQLLNARGHEVTLVSRKPGP-GRIT-WDELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAK   91 (298)
T ss_dssp             HHHHHHHHHTTCEEEEEESSCCT-TEEE-HHHHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEECCCCc-Ceee-cchhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHH
Confidence            45677777777666554221111 0000 001112335689999999986544444445677778888999999888877


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEeccccccccC-----------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      ++...  ...        ...+|+.||...+...           .+...|+..+...+.     ..... ..++++..+
T Consensus        92 ~~~~~--~~~--------~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~~~~~-~~~~~~~~~  155 (298)
T 4b4o_A           92 AITKA--PQP--------PKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEA-----AARLP-GDSTRQVVV  155 (298)
T ss_dssp             HHHHC--SSC--------CSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHH-----HHCCS-SSSSEEEEE
T ss_pred             HHHHh--CCC--------ceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHH-----HHHhh-ccCCceeee
Confidence            65432  111        3457777777544321           223334544443332     12234 678999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhh--------hcCCCCCCHHHHHHHHHHhcCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +||.|..|....   ...+.......        .....+...+|+++++++++..+
T Consensus       156 r~~~v~g~~~~~---~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~  209 (298)
T 4b4o_A          156 RSGVVLGRGGGA---MGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEAN  209 (298)
T ss_dssp             EECEEECTTSHH---HHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCT
T ss_pred             eeeeEEcCCCCc---hhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCC
Confidence            999998763210   00111111100        11122456799999999987543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.03  E-value=0.0011  Score=51.57  Aligned_cols=100  Identities=9%  Similarity=0.012  Sum_probs=68.1

Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc------
Q 028508           46 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------  119 (208)
Q Consensus        46 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~------  119 (208)
                      +...|+|||.||.....   ..+   ....+++|+.++..+++++...-  ..        ..+++++|+....      
T Consensus        78 ~~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~--------~~~vvv~snp~~~~~~~~~  141 (327)
T 1y7t_A           78 FKDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KK--------DVKVLVVGNPANTNALIAY  141 (327)
T ss_dssp             TTTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CT--------TCEEEECSSSHHHHHHHHH
T ss_pred             hCCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CC--------CeEEEEeCCchhhhHHHHH
Confidence            34789999999976532   122   34578899999999999887541  01        3578888886521      


Q ss_pred             --c-cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          120 --T-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       120 --~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                        . +.++...|+.+|...+.+...++..+.    +.+..++|..|..|
T Consensus       142 ~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g----~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          142 KNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG----TGVDRIRRMTVWGN  186 (327)
T ss_dssp             HTCTTSCGGGEEECCHHHHHHHHHHHHHHHT----CCGGGEECCEEEBC
T ss_pred             HHcCCCChhheeccchHHHHHHHHHHHHHhC----cChhheeeeEEEcC
Confidence              1 244566799999999998888887653    55555555555444

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.85  E-value=3.1e-05  Score=59.37  Aligned_cols=75  Identities=11%  Similarity=0.158  Sum_probs=48.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCH-HHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSP-NGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~-~~~~~~~~~n   79 (208)
                      +|+.++++++.+++... .++..+.+|+++++++.++++       .+|+||||+|.... .++.+.+. +.|..++++|
T Consensus       150 ~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn  221 (287)
T 1lu9_A          150 GRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYN  221 (287)
T ss_dssp             ESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECC
T ss_pred             ECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------hCCEEEECCCccccCCChhHcCchHHHHHHHHhh
Confidence            68888998888888653 236678899999998877654       58999999986432 11111121 3334455555


Q ss_pred             HHHHH
Q 028508           80 SVGTF   84 (208)
Q Consensus        80 ~~~~~   84 (208)
                      +.+++
T Consensus       222 ~~~~~  226 (287)
T 1lu9_A          222 AQPPL  226 (287)
T ss_dssp             CSSSC
T ss_pred             hhhhH
Confidence            55444

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.07  E-value=0.017  Score=46.32  Aligned_cols=53  Identities=17%  Similarity=0.132  Sum_probs=44.5

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 028508            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG   58 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~   58 (208)
                      ++|+.++++++.+++...+ .++..+.+|++|.+++.++++..     ++|+|||+++.
T Consensus        33 ~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----~~DvVin~ag~   86 (405)
T 4ina_A           33 ASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----KPQIVLNIALP   86 (405)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECSCG
T ss_pred             EECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----CCCEEEECCCc
Confidence            3689999999999887542 46788999999999999998865     69999999984

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=93.71  E-value=0.031  Score=41.01  Aligned_cols=127  Identities=9%  Similarity=-0.032  Sum_probs=66.5

Q ss_pred             HHHHHHHHhcCCCeeEEEc----------CCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH--H
Q 028508            9 RSAVAALHSLGIPAIGLEG----------DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV--I   76 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~----------D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~--~   76 (208)
                      ..+++.+.+.|.++.++..          |..+.++..++++.+.+.++++|++|+|||+....++ ....+.+.+.  -
T Consensus        38 ~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~~p~-~~~~~KIkk~~~~  116 (226)
T 1u7z_A           38 FAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAA-TVAPEKIKKQATQ  116 (226)
T ss_dssp             HHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEES-SCCSSCC------
T ss_pred             HHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHhcCCCCEEEECCcccCCCCc-cCChHHhcccccc
Confidence            4566777777776655421          1223334566777888888999999999998654333 2223333330  0


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      +.++.-.+....-+++.+.+...       .+.+ .|+= .+..               +.+.+....++. .+|+.+..
T Consensus       117 ~~~l~l~L~~~pdIL~~l~~~~~-------~~~~-~VGF-aaEt---------------~~l~e~A~~kL~-~k~~d~iv  171 (226)
T 1u7z_A          117 GDELTIKMVKNPDIVAGVAALKD-------HRPY-VVGF-AAET---------------NNVEEYARQKRI-RKNLDLIC  171 (226)
T ss_dssp             -CEEEEEEEECCCHHHHHHHCSS-------SCCE-EEEE-EEES---------------SSHHHHHHHHHH-HHTCSEEE
T ss_pred             CCceEEEEeecHHHHHHHHhhhc-------CCcE-EEEc-chhh---------------chHHHHHHHHHH-hcCCCEEE
Confidence            11222223333444555544210       1222 1111 1111               236666777777 77888888


Q ss_pred             eecCc
Q 028508          157 IAPGP  161 (208)
Q Consensus       157 v~pG~  161 (208)
                      .++..
T Consensus       172 aN~~~  176 (226)
T 1u7z_A          172 ANDVS  176 (226)
T ss_dssp             EEECS
T ss_pred             Eeecc
Confidence            87754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=92.50  E-value=0.22  Score=31.68  Aligned_cols=43  Identities=12%  Similarity=0.152  Sum_probs=31.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA   57 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag   57 (208)
                      +|++++++.+.      ...+..+.+|+++.+++.++++       ++|++|++++
T Consensus        36 ~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~~~   78 (118)
T 3ic5_A           36 DHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------GFDAVISAAP   78 (118)
T ss_dssp             ESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------TCSEEEECSC
T ss_pred             eCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------CCCEEEECCC
Confidence            46776665543      2346678899999887776653       7999999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=91.69  E-value=0.058  Score=39.74  Aligned_cols=55  Identities=13%  Similarity=0.176  Sum_probs=39.3

Q ss_pred             HHHHHHHHhcCCCeeEEEc------------CCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC
Q 028508            9 RSAVAALHSLGIPAIGLEG------------DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP   63 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~------------D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~   63 (208)
                      ..+++.+...|.++.++..            |+.+.+++.++++.+.+.++++|++|+||+.....+
T Consensus        33 ~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p   99 (232)
T 2gk4_A           33 KIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAVSDYTP   99 (232)
T ss_dssp             HHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEE
T ss_pred             HHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCccccccc
Confidence            4566677777776665543            233345678888888888899999999999765443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=91.05  E-value=5.3  Score=33.00  Aligned_cols=130  Identities=15%  Similarity=0.057  Sum_probs=76.5

Q ss_pred             HHHHHHHHhcCCCeeEEEcCCC-CHHHHHHHHHHHH-HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE-IDSVGTFI   85 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~D~~-~~~~~~~~~~~~~-~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~-~n~~~~~~   85 (208)
                      +.+.+.|.+.|.+++.+..+-. +.+.+...+.+.. ...+.++.|++..+.-.... ....      .+. ..+.+.+.
T Consensus        65 ~~l~~~L~~~G~~v~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~~-~~~~------~~~~~g~~~~l~  137 (525)
T 3qp9_A           65 APVLAALSGAGADPVQLDVSPLGDRQRLAATLGEALAAAGGAVDGVLSLLAWDESAH-PGHP------APFTRGTGATLT  137 (525)
T ss_dssp             HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHHHTTSCCSEEEECGGGCCCBC-TTSC------TTCBHHHHHHHH
T ss_pred             HHHHHHHHhcCCeEEEEeCCCCCCHHHHHHHHHhhhhcccCCCCeEEEcccCCCCcc-cccc------ccccchHHHHHH
Confidence            5677888888888776655433 6777777766333 45568899999877543211 1110      011 34566777


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      ++|++...    +.       ..++..++..+..... ....-...++++-+|.|+++.|+. ..-++...+-
T Consensus       138 l~qal~~~----~~-------~~~l~~vT~ga~~~~~-~~~~~~p~~a~l~Gl~r~~~~E~p-~~~~~~vDl~  197 (525)
T 3qp9_A          138 LVQALEDA----GV-------AAPLWCVTHGAVSVGR-ADHVTSPAQAMVWGMGRVAALEHP-ERWGGLIDLP  197 (525)
T ss_dssp             HHHHHHHT----TC-------CSCEEEEEESCCCCBT-TBCCSCHHHHHHHHHHHHHHHHST-TTEEEEEEEC
T ss_pred             HHHHHHhc----CC-------CCcEEEEECCCEeCCC-CCCCCCHHHHHHHHHHHHHHHhCC-CceEEEEEcC
Confidence            88876532    11       3456666654322211 111124678899999999999985 4344455543

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=89.46  E-value=2.4  Score=26.89  Aligned_cols=53  Identities=21%  Similarity=0.364  Sum_probs=38.0

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcC----------------------CCCHHHHHHHHHHHHHHhCCccEEEeC
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGD----------------------VRKREDAVRVVESTINHFGKLDILVNA   55 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D----------------------~~~~~~~~~~~~~~~~~~g~id~lv~~   55 (208)
                      .+++-+.++.+++..+|.+++....|                      +.|.++.+.-+.++-+.++.+|+++..
T Consensus        10 sdpeilkeivreikrqgvrvvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldvvviv   84 (162)
T 2l82_A           10 SDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIV   84 (162)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred             CCHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            45666777777777777666655444                      346777888888888888899987764

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=87.01  E-value=0.36  Score=39.23  Aligned_cols=46  Identities=15%  Similarity=0.089  Sum_probs=32.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG   58 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~   58 (208)
                      +|+.++++++.+.+    ..+..+.+|++|.+++.++++       ++|+|||+++.
T Consensus        33 ~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~DvVIn~a~~   78 (450)
T 1ff9_A           33 CRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KHDLVISLIPY   78 (450)
T ss_dssp             ESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TSSEEEECCC-
T ss_pred             ECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CCcEEEECCcc
Confidence            56666655543322    236678899999988877653       79999999985

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=85.59  E-value=1.1  Score=36.53  Aligned_cols=46  Identities=11%  Similarity=0.083  Sum_probs=34.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~   59 (208)
                      +|+.++++++.+.   .  .+..+.+|+.|.+++.++++       ++|+|||+++..
T Consensus        54 ~R~~~ka~~la~~---~--~~~~~~~D~~d~~~l~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           54 CRTLANAQALAKP---S--GSKAISLDVTDDSALDKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             ESSHHHHHHHHGG---G--TCEEEECCTTCHHHHHHHHH-------TSSEEEECSCGG
T ss_pred             ECCHHHHHHHHHh---c--CCcEEEEecCCHHHHHHHHc-------CCCEEEECCchh
Confidence            5787777766543   1  35567899999988777654       699999999853

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=85.48  E-value=2.6  Score=32.54  Aligned_cols=92  Identities=8%  Similarity=-0.004  Sum_probs=56.5

Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc------
Q 028508           46 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------  119 (208)
Q Consensus        46 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~------  119 (208)
                      +...|+||+.||.....   ..+.   ...+..|+.....+++.+..+-  ..        .+.||++|+....      
T Consensus        81 l~~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p--------~a~ii~~SNPv~~~t~~~~  144 (329)
T 1b8p_A           81 FKDADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVA--SR--------NIKVLVVGNPANTNAYIAM  144 (329)
T ss_dssp             TTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CT--------TCEEEECSSSHHHHHHHHH
T ss_pred             hCCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhc--CC--------CeEEEEccCchHHHHHHHH
Confidence            34789999999975532   2233   3456778887777777765431  01        5689999986521      


Q ss_pred             --c-cCCchhHHHHhHHHHHHHHHHHHHHhc-CCCCeE
Q 028508          120 --T-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIR  153 (208)
Q Consensus       120 --~-~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~gi~  153 (208)
                        . +.|....|+.++.--..+...++..+. +++.|+
T Consensus       145 ~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~  182 (329)
T 1b8p_A          145 KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIE  182 (329)
T ss_dssp             HTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred             HHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHce
Confidence              1 344555677776555566666666664 133454

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=85.08  E-value=0.36  Score=38.05  Aligned_cols=45  Identities=13%  Similarity=0.087  Sum_probs=25.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~   59 (208)
                      +|+.++++.+.+.+   +..   +.+|.++.+++.+++.       ..|++|++++..
T Consensus       196 d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~-------~~DvVi~~~g~~  240 (369)
T 2eez_A          196 DVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ-------HADLLIGAVLVP  240 (369)
T ss_dssp             ESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------HCSEEEECCC--
T ss_pred             ECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------CCCEEEECCCCC
Confidence            35555555443322   322   3456666666655543       689999999864

>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*

Probab=82.83  E-value=13  Score=29.33  Aligned_cols=113  Identities=18%  Similarity=0.180  Sum_probs=66.5

Q ss_pred             CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCCCCCCC
Q 028508           31 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV----GTFIMCHEALKYLKKGGRGQASSSS  106 (208)
Q Consensus        31 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~~~~~~~~  106 (208)
                      +.+.+.++++.+++.  ++|++||.+..-...+.  .+.+.+++.++.|-.    .+...+.+++.+-++..        
T Consensus       120 ~~e~v~~vv~~lk~~--~~DVvIn~~STE~~~p~--gs~~~l~~ai~~~~~~~i~aS~~YA~AAl~~~~~~a--------  187 (394)
T 1vjp_A          120 LKEAVDTLVKEWTEL--DPDVIVNTCTTEAFVPF--GNKEDLLKAIENNDKERLTATQVYAYAAALYANKRG--------  187 (394)
T ss_dssp             HHHHHHHHHHHHHHH--CCSEEEECCCCCCCCCC--SSHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHT--------
T ss_pred             hhhHHHHHHHHHHHc--CCCEEEEecCccCCCCC--CCHHHHHHHHhcCCCCccChHHHHHHHHHhhccccC--------
Confidence            355566677777665  79999998863332232  578889999998863    55556666665544433        


Q ss_pred             CceEEEecccccc-cc----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508          107 GGIIINISATLHY-TA----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus       107 ~~~iv~iss~~~~-~~----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +-.+||.+..... .|          .+-.+  .-+|.+..-+-+.|+.=+. .+|+++..+.
T Consensus       188 G~~fVN~~P~~ia~~P~~~ela~~~gvpi~G--DD~ktGqT~lks~La~~l~-~Rglkv~~~~  247 (394)
T 1vjp_A          188 GAAFVNVIPTFIANDPAFVELAKENNLVVFG--DDGATGATPFTADVLSHLA-QRNRYVKDVA  247 (394)
T ss_dssp             CEEEEECSSSCSTTCHHHHHHHHHTTEEEEC--SSBSCSHHHHHHHHHHHHH-HTTCEEEEEE
T ss_pred             CcceEecCCccccCCHHHHHHHHHcCCCEEc--cccCCCCCchHHHHHHHHH-HcCCceeEEE
Confidence            4668877764321 10          00000  0034444555556665555 6788887664

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=80.30  E-value=0.32  Score=36.90  Aligned_cols=16  Identities=25%  Similarity=0.468  Sum_probs=13.2

Q ss_pred             HhCCccEEEeCCCCCC
Q 028508           45 HFGKLDILVNAAAGNF   60 (208)
Q Consensus        45 ~~g~id~lv~~ag~~~   60 (208)
                      .++++|++|+|+|...
T Consensus       190 ~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          190 DLDGVDIIINATPIGM  205 (287)
T ss_dssp             CCTTCCEEEECSCTTC
T ss_pred             hhCCCCEEEECCCCCC
Confidence            4578999999999765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	208
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-38
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-35
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-34
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-34
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-32
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-32
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-31
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-31
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	5e-31
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-30
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-30
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-29
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-29
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-28
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-28
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-28
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	6e-28
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-27
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-27
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-27
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-27
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-27
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	6e-27
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-27
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-26
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-26
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-26
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-26
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-26
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-25
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-24
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-24
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-24
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-22
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	7e-22
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-21
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-21
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-21
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-21
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-21
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-21
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-21
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-21
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-20
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-20
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-20
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-20
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-19
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-18
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-18
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-18
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-17
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-16
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-15
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	9e-15
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-13
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-12
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-12
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-10
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	3e-10
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-08
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	9e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	0.002

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  131 bits (330), Expect = 2e-38
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 11/197 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA+ +LG   + ++ DV +  D     +  I+ FG+ DILVN A    L+P ++L+  
Sbjct: 43  AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++   EI+    F+M    +  +K+ G         G IIN+++T ++       H  +
Sbjct: 103 QWKKTFEINVDSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYIS 154

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-F 189
            KAA    TR+LA + G    I VN IAP  +  TA     A   +     + + A    
Sbjct: 155 TKAANIGFTRALASDLG-KDGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRL 212

Query: 190 GEKWDIAMAALYLASDA 206
               D+  AA +LASD 
Sbjct: 213 QVPLDLTGAAAFLASDD 229

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  123 bits (309), Expect = 2e-35
 Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
            I     + D+    + VR VE      G++D+LVN AA      A  +    +R V+E+
Sbjct: 47  AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEV 106

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +      +   A + ++K G G         I+N+++     A       +A+K  + ++
Sbjct: 107 NLTAPMHLSALAAREMRKVGGGA--------IVNVASVQGLFAEQENAAYNASKGGLVNL 158

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           TRSLAL+      IRVN +APG I       A      PE  R    D  A  + G+  +
Sbjct: 159 TRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEE 217

Query: 195 IAMAALYLASDA 206
           +A A L+LAS+ 
Sbjct: 218 VAEAVLFLASEK 229

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 2e-34
 Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 13/210 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            R    +    A   S G P   I    D+   ED + +  +  +    +DI +N A   
Sbjct: 41  ARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA 100

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
                   S +G++ +  ++ +   I   EA + +K+           G IINI++   +
Sbjct: 101 RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD------DGHIININSMSGH 154

Query: 120 TATWYQIHV--SAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                 +    SA K AV ++T  L  E       IR   I+PG + +T    KL  ++ 
Sbjct: 155 RVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV-ETQFAFKL-HDKD 212

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
             KA       K  +  D+A A +Y+ S  
Sbjct: 213 PEKAAATYEQMKCLKPEDVAEAVIYVLSTP 242

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  120 bits (302), Expect = 2e-34
 Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 11/206 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   ++     G    G   D   R +  +++++  + F GKLDIL+N      
Sbjct: 39  ARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR 98

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  D +   F   I  +    + +   A   LK  G         G II +S+     
Sbjct: 99  SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGC--------GNIIFMSSIAGVV 150

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           +       SA K A++ + R+LA EW     IR N +AP  I  T     +  +E +   
Sbjct: 151 SASVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVI-ATPLAEAVYDDEFKKVV 208

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                  +FGE  +++    +L   A
Sbjct: 209 ISRKPLGRFGEPEEVSSLVAFLCMPA 234

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  116 bits (291), Expect = 1e-32
 Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 18/210 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +   +   A L   G  ++ +  DV    D   V+ +     G L++LVN A     
Sbjct: 37  DINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              E      F  +++I++   FI C + +  +K+         +GG IIN+++   +  
Sbjct: 94  GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE---------TGGSIINMASVSSWLP 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                  SA+KAAV ++TR+ AL      YAIRVN I P  I  T  +    P+ +  + 
Sbjct: 145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEM 203

Query: 181 TDYMAAYK----FGEKWDIAMAALYLASDA 206
             +               IA   L+LASD 
Sbjct: 204 VLHDPKLNRAGRAYMPERIAQLVLFLASDE 233

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  115 bits (289), Expect = 2e-32
 Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 23/218 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA- 57
           GR    L      + + G+       +  DV        ++ +T+  FGKLDILVN A  
Sbjct: 36  GRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGA 95

Query: 58  ---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
               +        S   +   + ++      +  +A+ +L            G I+   S
Sbjct: 96  AIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--------GEIVNISS 147

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
                 AT    + S AKAA+D  TR+ A++    + IRVN I+PG +    G +   PE
Sbjct: 148 IASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPE 206

Query: 175 EIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 205
           E   K    MA  K        G+  DIA    +LA  
Sbjct: 207 ETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADR 244

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  113 bits (284), Expect = 1e-31
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 10/206 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR   V   A  ++ +        + D    +   ++ ++T   FG +  LVN A     
Sbjct: 37  GRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              E+ +   +R ++ ++  G F      ++ +K  G        G  IIN+S+   +  
Sbjct: 96  KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVG 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                  +A+K AV  +++S AL+    DY +RVN + PG I  T  V  L   E     
Sbjct: 149 DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQ 207

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
                    GE  DIA   +YLAS+ 
Sbjct: 208 RTKTPMGHIGEPNDIAYICVYLASNE 233

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 3e-31
 Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-F 60
            + ++  R+    L      A+ +  DV + +D   +V  TI  FG+LD +VN A  +  
Sbjct: 37  DKDESGGRALEQELPG----AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPP 92

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
               E+ S  GFR ++E++ +GT+ +   AL YL+K           G +INIS+ +   
Sbjct: 93  PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ---------GNVINISSLVGAI 143

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEE 175
                +   A K AV ++T++LAL+    Y +RVN I+PG I  T    +LA     P  
Sbjct: 144 GQAQAVPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNI-WTPLWEELAALMPDPRA 201

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
              +        + G+  ++  AA++LAS+A
Sbjct: 202 SIREGMLAQPLGRMGQPAEVGAAAVFLASEA 232

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  112 bits (281), Expect = 5e-31
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 23/218 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA- 57
           GR    L      +   G+       +  DV   +   +++ ST+  FGK+D+LVN A  
Sbjct: 36  GRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGA 95

Query: 58  ---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
                F     D   + +   ++++      M  +   +L            G I+   S
Sbjct: 96  AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--------GEIVNVSS 147

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
                 A    ++ + AKAA+D  TRS A++    + IRVN ++PG ++     +   P+
Sbjct: 148 IVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPD 206

Query: 175 EIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 205
           +   K  ++MA++K        G+   IA   L+LA  
Sbjct: 207 QASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADR 244

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  109 bits (274), Expect = 3e-30
 Identities = 58/196 (29%), Positives = 79/196 (40%), Gaps = 10/196 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A    LG  A     DV   ED  RVV      FG +D LVN A  +  +  E  S  
Sbjct: 42  GAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            FR V+EI+  G FI     +  +K  G        GG I+NIS+              A
Sbjct: 102 RFRKVVEINLTGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGA 153

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +K  V  +++  A+E GTD  IRVN + PG    T   ++    +      +        
Sbjct: 154 SKWGVRGLSKLAAVELGTDR-IRVNSVHPGMT-YTPMTAETGIRQGEGNYPNTPMGRVGN 211

Query: 191 EKWDIAMAALYLASDA 206
           E  +IA A + L SD 
Sbjct: 212 EPGEIAGAVVKLLSDT 227

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  108 bits (272), Expect = 7e-30
 Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 15/210 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A    
Sbjct: 39  SRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI 98

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++ I+    + +   A  +LK   RG         ++ IS+     
Sbjct: 99  YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGN--------VVFISSVSGAL 150

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A  Y+    A K A+D +TR LA EW     IRVNG+ PG I  T+ V     +  + + 
Sbjct: 151 AVPYEAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVI-ATSLVEMTIQDPEQKEN 208

Query: 181 TDYMAAY----KFGEKWDIAMAALYLASDA 206
            + +       + GE  ++A    +L   A
Sbjct: 209 LNKLIDRCALRRMGEPKELAAMVAFLCFPA 238

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  107 bits (267), Expect = 3e-29
 Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 21/216 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           G         VA L  LG   + ++ D+ K  + V + +  ++HFG LD +++ +     
Sbjct: 38  GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +++   F  V  +++ G F +  + LK+ ++GGR   +SS   ++         T 
Sbjct: 98  CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM---------TG 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-----------DTAGVSK 170
                  + +KAAV+   R+ A++ G    + VN IAPG +K              G   
Sbjct: 149 IPNHALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG 207

Query: 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           +  E+I     +     + G   DI  A   L  + 
Sbjct: 208 MPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEE 243

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  106 bits (265), Expect = 7e-29
 Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 4/206 (1%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R           +    G+     + DV   +   + ++      G +  L+  A  + 
Sbjct: 40  YRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV 99

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + PA +L+   F  V +++  G F  C    K   +  +  +   +  +   I       
Sbjct: 100 VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN 159

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
            +  Q+  +++KAA  ++ + LA EW     IRVN ++PG + +T   + +  ++IR   
Sbjct: 160 GSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQ 216

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
              +   +F +  ++   A+ L SD 
Sbjct: 217 ASNIPLNRFAQPEEMTGQAILLLSDH 242

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  105 bits (264), Expect = 1e-28
 Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 23/216 (10%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
                    VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +      
Sbjct: 51  NSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG 110

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
             +D++P  F  V  I++ G F +  EA K+L+ GGR     S  G            A 
Sbjct: 111 HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG---------QAKAV 161

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI------ 176
                 S +K A+++  R +A++   D  I VN +APG I  T     +  E I      
Sbjct: 162 PKHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGI-KTDMYHAVCREYIPNGENL 219

Query: 177 ------RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                    A  +    + G   DIA    +LAS+ 
Sbjct: 220 SNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASND 255

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  104 bits (260), Expect = 2e-28
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +  LR A  A     + A  +  DV       R     + H G+LD +V+ A     
Sbjct: 36  DIEEGPLREAAEA-----VGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRD 90

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +    +  V+ ++  G+F++   A + +++              I ++A+  Y  
Sbjct: 91  NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMRE---------KNPGSIVLTASRVYLG 141

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + +A+ A V  +TR+LALE G  + IRVN +APG I +T   +K+ PE++R KA 
Sbjct: 142 NLGQANYAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFI-ETRMTAKV-PEKVREKAI 198

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
                 + G+  ++A AAL+L SD 
Sbjct: 199 AATPLGRAGKPLEVAYAALFLLSDE 223

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  105 bits (262), Expect = 5e-28
 Identities = 39/205 (19%), Positives = 79/205 (38%), Gaps = 24/205 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           G+  +     V  +   G  A+     V   E   ++V++ ++ FG++D++VN A     
Sbjct: 47  GKGSSAADKVVEEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRD 103

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +S   +  +  +   G+F +   A  ++KK           G II  ++      
Sbjct: 104 RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYG 155

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
            + Q + SAAK  +  +  +L +E      I  N IAP     +     + PE++     
Sbjct: 156 NFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAG--SRMTETVMPEDLV---- 208

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
                 +  +   +A   L+L  ++
Sbjct: 209 ------EALKPEYVAPLVLWLCHES 227

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  103 bits (258), Expect = 6e-28
 Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 11/205 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +    S V  + S G  + G  GDV K+E+   V+   +     +DILVN A     
Sbjct: 41  SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD 100

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +  + +  V+  +    F +     K +             G IINIS+ +  T 
Sbjct: 101 NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR--------YGRIINISSIVGLTG 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + S++KA V   T+SLA E      I VN IAPG I           E+I+    
Sbjct: 153 NVGQANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDKI--SEQIKKNII 209

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
             + A + G   ++A  A +L+SD 
Sbjct: 210 SNIPAGRMGTPEEVANLACFLSSDK 234

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  103 bits (258), Expect = 1e-27
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 10/207 (4%)

Query: 2   GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGNF
Sbjct: 56  SRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF 115

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + P E LSPN ++T+ +I   GT  +  E  K L K  +G          ++I+     T
Sbjct: 116 ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG-------AAFLSITTIYAET 168

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSK 179
            + + +  ++AKA V+++++SLA EWG  Y +R N I PGPIK     S+L P      +
Sbjct: 169 GSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKE 227

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206
               +   + G   ++A  A +L SD 
Sbjct: 228 MIGRIPCGRLGTVEELANLAAFLCSDY 254

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  102 bits (255), Expect = 2e-27
 Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 9/206 (4%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R       A   L    G+  +    DV   E+  +++E+    FGKLD +VNAA  N 
Sbjct: 36  SRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             PAE+   + FR VIE++  GT+ +C EA             S +  II   S T+   
Sbjct: 96  RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL-------LRESDNPSIINIGSLTVEEV 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                   +A+K  V S+T++LA EWG  Y IRVN IAPG  +     +  +  E     
Sbjct: 149 TMPNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYM 207

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDA 206
              +   + G   D+   A++LAS+ 
Sbjct: 208 LKRIPLGRTGVPEDLKGVAVFLASEE 233

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 2e-27
 Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 16/205 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L S V            +  D+   E      E  +   G +D+LVN AA   L
Sbjct: 38  SRTQADLDSLVRECPG----IEPVCVDLGDWEA----TERALGSVGPVDLLVNNAAVALL 89

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F    E++      +     + L   G           I+N+S+     A
Sbjct: 90  QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG-------AIVNVSSQCSQRA 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                   + K A+D +T+ +ALE G  + IRVN + P  +  + G +  +         
Sbjct: 143 VTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTML 201

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
           + +   KF E   +  A L+L SD 
Sbjct: 202 NRIPLGKFAEVEHVVNAILFLLSDR 226

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 4e-27
 Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 17/212 (8%)

Query: 2   GRRKTVLRSAVAAL-----HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56
            R+   L+SA   L      +     I ++ ++R  E+   +V+ST++ FGK++ LVN  
Sbjct: 43  SRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG 102

Query: 57  AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
            G FL PAE +S  G+  V+E +  GTF MC        K   G          I     
Sbjct: 103 GGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGS---------IVNIIV 153

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PE 174
                    +H  AA+A V ++T+SLALEW     IR+N +APG I     V       +
Sbjct: 154 PTKAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQ 212

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                +   + A + G   +++    +L S A
Sbjct: 213 SFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 244

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  101 bits (252), Expect = 5e-27
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 16/214 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A     
Sbjct: 33  ARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +L+   +  V+E +  G F +  + LK      RG       G I+NI++T     
Sbjct: 93  GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT------GRIVNIASTGGKQG 146

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLA 172
             +    SA+K  V   T++L LE      I VN + PG ++           + + +++
Sbjct: 147 VVHAAPYSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVS 205

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
            EE   + T  +   ++ +  ++A    YL    
Sbjct: 206 TEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  101 bits (252), Expect = 6e-27
 Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 11/205 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                     V  +  LG  A     D+   ++   + +  I+  GK+DILVN A G   
Sbjct: 42  DINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP 101

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  D+    FR   E++    F +       ++K        + GG+I+ I++      
Sbjct: 102 KP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEK--------NGGGVILTITSMAAENK 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  +++KAA   + R++A + G +  IRVNGIAPG I  T  +  +   EI  K  
Sbjct: 153 NINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAI-LTDALKSVITPEIEQKML 210

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
            +    + G+  DIA AAL+L S A
Sbjct: 211 QHTPIRRLGQPQDIANAALFLCSPA 235

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  100 bits (251), Expect = 6e-27
 Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 16/205 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R  + L S              +  D+   +      E  +   G +D+LVN AA   +
Sbjct: 36  TRTNSDLVSLAKECPG----IEPVCVDLGDWDA----TEKALGGIGPVDLLVNNAALVIM 87

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F     ++    F +     + +             G I+N+S+ + +  
Sbjct: 88  QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMIN-------RGVPGSIVNVSSMVAHVT 140

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
               I  S+ K A+  +T+++A+E G  + IRVN + P  +    G    A  E   K  
Sbjct: 141 FPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLK 199

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
           +     KF E  D+  + L+L SD 
Sbjct: 200 ERHPLRKFAEVEDVVNSILFLLSDR 224

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.7 bits (248), Expect = 2e-26
 Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 19/212 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              K  L    A    LG        D   RED     +      G + ILVN A   + 
Sbjct: 38  DINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                          E++ +  F      L  + K           G I+ +++   + +
Sbjct: 98  SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVS 149

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIK-------DTAGVSKLA 172
             + +   ++K A     ++L  E        ++   + P  +         T+    L 
Sbjct: 150 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLE 209

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           PEE+ ++    +   +  +   I  +  +L +
Sbjct: 210 PEEVVNRLMHGILTEQ--KMIFIPSSIAFLTT 239

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.7 bits (248), Expect = 2e-26
 Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 24/215 (11%)

Query: 2   GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
                      AALH        + ++ DV  ++         ++HFG+LDILVN A  N
Sbjct: 34  DWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN 93

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
                   +   +   ++I+ V      +  L Y+ K   G+     GGIIIN+S+    
Sbjct: 94  --------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGE-----GGIIINMSSLAGL 140

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                Q    A+K  +   TRS AL     +  +R+N I PG + +TA +  +  EE   
Sbjct: 141 MPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV-NTAILESIEKEENMG 199

Query: 179 KATDYMAAYK-------FGEKWDIAMAALYLASDA 206
           +  +Y    K         +   IA   + L  D 
Sbjct: 200 QYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD 234

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 99.8 bits (248), Expect = 2e-26
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 8/204 (3%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
            ++    S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V
Sbjct: 40  SKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV 99

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
            + ++S + +  VI+ +  G F+   EA+KY          +   G +IN+S+       
Sbjct: 100 SSHEMSLSDWNKVIDTNLTGAFLGSREAIKY-------FVENDIKGTVINMSSVHEKIPW 152

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
              +H +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+    
Sbjct: 153 PLFVHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVES 211

Query: 183 YMAAYKFGEKWDIAMAALYLASDA 206
            +     GE  +IA  A +LAS  
Sbjct: 212 MIPMGYIGEPEEIAAVAAWLASSE 235

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 99.0 bits (246), Expect = 4e-26
 Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 14/210 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +      G+   G   D+  R +  +++++  + F GKL+ILVN A    
Sbjct: 37  SRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI 96

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++  +    + +   A   LK    G         +I +S+   ++
Sbjct: 97  HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGN--------VIFLSSIAGFS 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEI 176
           A       SA+K A++ +T+SLA EW     IRVN +APG I     +TA       +E 
Sbjct: 149 ALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 207

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                      + G+  +++    +L   A
Sbjct: 208 IDNFIVKTPMGRAGKPQEVSALIAFLCFPA 237

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 99.0 bits (246), Expect = 5e-26
 Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 21/216 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR +  L      +   G+PA     +  DV +      ++ +T+  FGK+DILVN A  
Sbjct: 35  GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGA 94

Query: 59  NFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
           N        D     ++   +++      M  +  ++L K            I+   S  
Sbjct: 95  NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKG--------EIVNVSSIV 146

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
               A     + + AKAA+D  TR  A++    + +RVN ++PG +      +   PE  
Sbjct: 147 AGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETA 205

Query: 177 RSKATDYMAAYK-------FGEKWDIAMAALYLASD 205
             K   ++ + K        G+  +IA   ++LA  
Sbjct: 206 SDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR 241

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 96.7 bits (240), Expect = 2e-25
 Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 20/205 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L        + G     +  D+    D  R+    +  +G +D LVN A     
Sbjct: 39  SRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF 98

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               DL+   F   +  +  GTF +       +++           G I  I++     A
Sbjct: 99  GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH--------SGHIFFITSVAATKA 150

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
             +      +K     +  ++ L       +R+  + PG +             +  K  
Sbjct: 151 FRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVY----------TPMWGKVD 199

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
           D M A       DIA   +      
Sbjct: 200 DEMQA-LMMMPEDIAAPVVQAYLQP 223

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 95.5 bits (237), Expect = 1e-24
 Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 14/210 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                  +     + S  +    +  DV K ED   +V++TI   GKLDI+         
Sbjct: 37  DIADDHGQKVCNNIGSPDV-ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLST 95

Query: 62  VP--AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
            P    +     F+ V++I+  G F++   A + +    +       G I+   S +   
Sbjct: 96  TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK-------GSIVFTASISSFT 148

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                    +A K AV  +T SL  E G +Y IRVN ++P  +           +  R +
Sbjct: 149 AGEGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVE 207

Query: 180 ATDYMAAY---KFGEKWDIAMAALYLASDA 206
              + AA          D+A A  YLA D 
Sbjct: 208 ELAHQAANLKGTLLRAEDVADAVAYLAGDE 237

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 94.3 bits (234), Expect = 2e-24
 Identities = 33/196 (16%), Positives = 74/196 (37%), Gaps = 18/196 (9%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIE 77
                  +      ++   ++E+  + +G++D+LV+         P +  +   +R  +E
Sbjct: 42  AFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVE 101

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
              +  F + +     +KK   G         II I++   +         ++A+A   +
Sbjct: 102 ALQIRPFALVNAVASQMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACT 153

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FG 190
           +  +L+ E G +Y I V  I P  +  +       P E      +++A  K        G
Sbjct: 154 LANALSKELG-EYNIPVFAIGPNYL-HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLG 211

Query: 191 EKWDIAMAALYLASDA 206
            + ++     +LAS +
Sbjct: 212 TQKELGELVAFLASGS 227

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 94.3 bits (234), Expect = 3e-24
 Identities = 45/209 (21%), Positives = 67/209 (32%), Gaps = 24/209 (11%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP- 69
                   G   +G+ GDVR  ED  +     +  FGK+D L+  A       A    P 
Sbjct: 42  LAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPE 101

Query: 70  ----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
                 F  V  I+  G        L  L            G +I  IS    Y      
Sbjct: 102 ESLDAAFDEVFHINVKGYIHAVKACLPALVASR--------GNVIFTISNAGFY-PNGGG 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK--------DTAGVSKLAPEEIR 177
              +AAK A+  + R LA E      +RVNG+  G I            G   ++   + 
Sbjct: 153 PLYTAAKHAIVGLVRELAFELAPY--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLA 210

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDA 206
                 +   +  E  +   A ++ A+  
Sbjct: 211 DMLKSVLPIGRMPEVEEYTGAYVFFATRG 239

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 88.6 bits (219), Expect = 3e-22
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 16/196 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A    L   A  +  DV +       V++ +  FG L +LVN A    +   ED +  
Sbjct: 43  GKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++ +++++  G F+     +K +K+ GRG         IINIS+      T      +A
Sbjct: 103 EWQRILDVNLTGVFLGIRAVVKPMKEAGRGS--------IINISSIEGLAGTVACHGYTA 154

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K AV  +T+S ALE G    IRVN I PG +  T     +  +  ++      A  +  
Sbjct: 155 TKFAVRGLTKSTALELG-PSGIRVNSIHPGLV-KTPMTDWVPEDIFQT------ALGRAA 206

Query: 191 EKWDIAMAALYLASDA 206
           E  +++   +YLASD 
Sbjct: 207 EPVEVSNLVVYLASDE 222

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 87.9 bits (217), Expect = 7e-22
 Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 18/214 (8%)

Query: 2   GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
                 L ++ AA+         +    DV         V +T   FG++D   N A   
Sbjct: 35  DVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIE 94

Query: 60  FLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
               P E  +   F  V+ I+  G F+   + LK +++           G+++N ++   
Sbjct: 95  GKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE--------QGSGMVVNTASVGG 146

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK------DTAGVSKLA 172
                 Q   +AAK  V  +TR+ A+E+G  Y IR+N IAPG I           +    
Sbjct: 147 IRGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPEN 205

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           P +   +      + ++GE  +IA    +L SD 
Sbjct: 206 PRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 239

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 87.0 bits (215), Expect = 1e-21
 Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 10/173 (5%)

Query: 34  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93
           D  + ++       ++DILV  A G      ++L+   F+  I+   +    +    L  
Sbjct: 52  DLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 111

Query: 94  LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 153
           +K+ G G+        I+ I++    +        ++A+ A+    ++L+ E    Y I 
Sbjct: 112 MKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA-PYGIT 162

Query: 154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           VN +APG   +T  V +L  EE + +    +   +  +  +IA    +L S+ 
Sbjct: 163 VNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK 214

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 1e-21
 Identities = 42/236 (17%), Positives = 70/236 (29%), Gaps = 51/236 (21%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R  T  ++AV  L + G+     + D+   +    + +     +G LD+LVN A   F 
Sbjct: 35  ARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFK 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI------------ 109
           V             ++ +  GT  +C E L  +K  GR    SS   +            
Sbjct: 95  VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQ 154

Query: 110 -------------------IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 150
                              + +    +H    W        K  V  ++R  A +     
Sbjct: 155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQR 214

Query: 151 A---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 203
               I +N   PG ++                 TD           + A   +YLA
Sbjct: 215 KGDKILLNACCPGWVR-----------------TDMAGPKATKSPEEGAETPVYLA 253

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 2e-21
 Identities = 39/215 (18%), Positives = 71/215 (33%), Gaps = 20/215 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R K  L+  V+    LG   A  + G +     A + V       G LD+L+     N 
Sbjct: 45  ARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT 104

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            +       +  R  +E++ +   ++   AL  LK+           G I+ +S+     
Sbjct: 105 SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN---------GSIVVVSSLAGKV 155

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIK---------DTAGVSK 170
           A       SA+K A+D    S+  E+      + +     G I              +  
Sbjct: 156 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQA 215

Query: 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
              EE   +     A  +    +D ++    L  +
Sbjct: 216 APKEECALEIIKGGALRQEEVYYDSSLWTTLLIRN 250

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 87.0 bits (215), Expect = 2e-21
 Identities = 38/197 (19%), Positives = 61/197 (30%), Gaps = 16/197 (8%)

Query: 11  AVAALHSLGIPAIGLEGDV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           A     +  +       DV     ++ ++++   +    +DIL+N A          L  
Sbjct: 46  AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAG--------ILDD 97

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
           +     I I+  G        L +       +     GGII NI +   + A       S
Sbjct: 98  HQIERTIAINFTGLVNTTTAILDF-----WDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           A+KAAV S T SLA        +    I PG    T  V               +     
Sbjct: 153 ASKAAVVSFTNSLAKLAP-ITGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHP 210

Query: 190 GEKWDIAMAALYLASDA 206
            +  +        A +A
Sbjct: 211 TQTSEQCGQNFVKAIEA 227

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.8 bits (214), Expect = 2e-21
 Identities = 37/217 (17%), Positives = 64/217 (29%), Gaps = 21/217 (9%)

Query: 2   GRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVV----ESTINHFGKLDILVNA 55
            R +++LR     L +    +  +    D+       R++    E       +  +L+N 
Sbjct: 40  ARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINN 99

Query: 56  AAGNFLVPA---EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
           AA    V                  ++      +    L   +              ++N
Sbjct: 100 AATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLS------KTVVN 153

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---DTAGVS 169
           IS+              A KAA D + + LA E     ++RV   APGP+          
Sbjct: 154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEE---PSVRVLSYAPGPLDNDMQQLARE 210

Query: 170 KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                E+RSK     +     +    A   L L    
Sbjct: 211 TSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKD 247

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 2e-21
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 12/167 (7%)

Query: 44  NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103
           N   +LD+L N A         D     +   + ++    ++M    L  +         
Sbjct: 70  NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ------ 123

Query: 104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
             SG II   S          +   S  KAAV  +T+S+A ++     IR N + PG + 
Sbjct: 124 -KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVD 181

Query: 164 DTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLASDA 206
             +   ++       +A +         +F    +IAM  +YLASD 
Sbjct: 182 TPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 85.9 bits (212), Expect = 3e-21
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 17/205 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R + +L  AVAAL      AI +  DV   +    V    +  FG+L  + + A     
Sbjct: 36  DREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHS 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
             + +L    +  V+ ++  G+F++  +A + L++GG    + S  G+            
Sbjct: 93  ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA---------- 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
            +   H +A K  V  + R+LALE      +RVN + PG I  T   + L P     +  
Sbjct: 143 -FGLAHYAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLI-QTPMTAGLPPWA-WEQEV 198

Query: 182 DYMAAYKFGEKWDIAMAALYLASDA 206
                 + G   ++A AAL+L S+ 
Sbjct: 199 GASPLGRAGRPEEVAQAALFLLSEE 223

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 85.2 bits (210), Expect = 6e-21
 Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 12/206 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R           + + G  AI   GDV K  D   ++++ I+ +G +D++VN A     
Sbjct: 33  ARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +  + +  VI+++  G F+    A K + K           G IINI++ +    
Sbjct: 93  TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR--------KGRIINIASVVGLIG 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + +AAKA V   +++ A E      I VN + PG I     ++    E++  K  
Sbjct: 145 NIGQANYAAAKAGVIGFSKTAAREGA-SRNINVNVVCPGFIAS--DMTAKLGEDMEKKIL 201

Query: 182 DYMAAYKFGEKWDIAMAALYLA-SDA 206
             +   + G+  ++A    +LA S A
Sbjct: 202 GTIPLGRTGQPENVAGLVEFLALSPA 227

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 84.5 bits (208), Expect = 1e-20
 Identities = 46/220 (20%), Positives = 83/220 (37%), Gaps = 24/220 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-F 60
              +  L  A A++   G+ A     DV   E  +  V+S +  FGK+D L N A     
Sbjct: 36  DMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGA 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P +D   + F  V+ I+  G F +     + +     G+        I+N ++     
Sbjct: 96  FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGR--------IVNTASMAGVK 147

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--------------KDTA 166
                     +K A+ ++T + AL+    Y IRVN I+PG +              K  +
Sbjct: 148 GPPNMAAYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGS 206

Query: 167 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                 P+ +  +    +   ++G+  +I     +L  D 
Sbjct: 207 QYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDD 246

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.0 bits (207), Expect = 1e-20
 Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 11/185 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
             G+E DV   +   R   +   H G +++LV+ A  +       ++   F  VI  +  
Sbjct: 47  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 106

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G F +   A + +++   G+        +I I +         Q + +A+KA V  + RS
Sbjct: 107 GAFRVAQRASRSMQRNKFGR--------MIFIGSVSGLWGIGNQANYAASKAGVIGMARS 158

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 201
           +A E  +   +  N +APG I DT     L  E I+  A  ++ A + G   ++A    +
Sbjct: 159 IAREL-SKANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSF 215

Query: 202 LASDA 206
           LAS+ 
Sbjct: 216 LASED 220

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 83.3 bits (205), Expect = 4e-20
 Identities = 45/214 (21%), Positives = 78/214 (36%), Gaps = 17/214 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                  ++  + ++  G  A+ ++ DV  R+     VE      G  D++VN A     
Sbjct: 32  DYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P E ++P     V  I+  G       A++  KK G G         IIN  +   +  
Sbjct: 92  TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGG-------KIINACSQAGHVG 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLA 172
                  S++K AV  +T++ A +      I VNG  PG +         +  +  +   
Sbjct: 145 NPELAVYSSSKFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP 203

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                ++    +   +  E  D+A    YLAS  
Sbjct: 204 LGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD 237

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 82.9 bits (204), Expect = 4e-20
 Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 7/199 (3%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA---AAGNFLVPAEDL 67
            V  L   G   I +EGDV + ED  R V           ++  A    A   L      
Sbjct: 29  VVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPH 88

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               FR V+E++ +GTF +   A   +++      +    G+I+N ++   +     Q  
Sbjct: 89  GLESFRRVLEVNLLGTFNVLRLAAWAMRE--NPPDAEGQRGVIVNTASVAAFEGQIGQAA 146

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  V ++T   A E    + IRV  +APG   DT  +  L  +   S A       
Sbjct: 147 YAASKGGVVALTLPAARELA-GWGIRVVTVAPGLF-DTPLLQGLPEKAKASLAAQVPFPP 204

Query: 188 KFGEKWDIAMAALYLASDA 206
           + G   + A   L++  + 
Sbjct: 205 RLGRPEEYAALVLHILENP 223

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 81.7 bits (201), Expect = 1e-19
 Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 11/196 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A A    LG    GL  +V        V+E     FG++DILVN A          +   
Sbjct: 41  AQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE 100

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +IE +    F +    ++ + K           G II I + +       Q + +A
Sbjct: 101 EWNDIIETNLSSVFRLSKAVMRAMMKKR--------HGRIITIGSVVGTMGNGGQANYAA 152

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKA +   ++SLA E      I VN +APG I+     +    ++ R+     + A + G
Sbjct: 153 AKAGLIGFSKSLAREVA-SRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLG 209

Query: 191 EKWDIAMAALYLASDA 206
              +IA A  +LASD 
Sbjct: 210 GAQEIANAVAFLASDE 225

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 79.1 bits (194), Expect = 1e-18
 Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 22/216 (10%)

Query: 3   RRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                +    A L +  G+  +    D+ K E    +V++ +   G++DILVN A     
Sbjct: 37  GDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT 96

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              ED     +  ++ ++    F     AL ++KK G         G IINI++     A
Sbjct: 97  ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGF--------GRIINIASAHGLVA 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           +  +    AAK  V   T+  ALE      I  N I PG +  T  V K           
Sbjct: 149 SANKSAYVAAKHGVVGFTKVTALETA-GQGITANAICPGWV-RTPLVEKQISALAEKNGV 206

Query: 182 DYMAAYK-----------FGEKWDIAMAALYLASDA 206
           D   A +           F     +   A++LASDA
Sbjct: 207 DQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDA 242

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 78.8 bits (193), Expect = 2e-18
 Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 12/187 (6%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
                +    +++ +   FG+ D+LVN A+  +  P             +        + 
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELF 123

Query: 88  HEALK--------YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 139
                        + ++ G G A  S    ++N+   +           + AK A+  +T
Sbjct: 124 GSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLT 183

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           R+ ALE      IRVN +APG       + +   EE R K               IA A 
Sbjct: 184 RAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEASAAQIADAI 239

Query: 200 LYLASDA 206
            +L S  
Sbjct: 240 AFLVSKD 246

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 77.5 bits (190), Expect = 4e-18
 Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 20/214 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                  R+  A +   G  A  +  DV  +    R V   ++ +G +DILVN AA   L
Sbjct: 36  DINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDL 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   +  +  I+  GT  M     + +  GGRG         IIN+++      
Sbjct: 93  APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGG-------KIINMASQAGRRG 145

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP---------IKDTAGVSKLA 172
                   A KAAV S+T+S  L     + I VN IAPG              A    L 
Sbjct: 146 EALVGVYCATKAAVISLTQSAGLNLI-RHGINVNAIAPGVVDGEHWDGVDAKFADYENLP 204

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
             E + +    +   + G   D+   A++LA+  
Sbjct: 205 RGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE 238

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 76.0 bits (186), Expect = 2e-17
 Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 15/182 (8%)

Query: 29  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVGTF 84
           V + E+   +       FG LD LV+A A            D     +   +E+ +    
Sbjct: 67  VTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLV 126

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +   A   L++GG           I+ ++             ++ AKAA+++  R LA 
Sbjct: 127 AVARRAEPLLREGGG----------IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAY 176

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E G    +RVN I+ GP++  A  S     ++  +        +   + ++    L+L S
Sbjct: 177 ELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLS 235

Query: 205 DA 206
             
Sbjct: 236 PL 237

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.3 bits (179), Expect = 1e-16
 Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS 80
            + +     ++ D V      +    K+D ++  A G                 + +   
Sbjct: 45  IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI 104

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
             + I  H A K+LK+GG    + +   +            T   I    AK AV  + +
Sbjct: 105 WTSTISSHLATKHLKEGGLLTLAGAKAALD----------GTPGMIGYGMAKGAVHQLCQ 154

Query: 141 SLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           SLA +            + P  + DT    K  PE   S          +     +    
Sbjct: 155 SLAGKNSGMPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETF 204

Query: 200 LYLASDA 206
               +  
Sbjct: 205 HDWITGN 211

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 4e-15
 Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 4/135 (2%)

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F+ V++++ +GTF +       + +           G+IIN ++   +     Q   SA+
Sbjct: 109 FQRVLDVNLMGTFNVIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSAS 166

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K  +  +T  +A +      IRV  IAPG    T  ++ L  +     A+      + G+
Sbjct: 167 KGGIVGMTLPIARDLA-PIGIRVMTIAPGLF-GTPLLTSLPEKVCNFLASQVPFPSRLGD 224

Query: 192 KWDIAMAALYLASDA 206
             + A     +  + 
Sbjct: 225 PAEYAHLVQAIIENP 239

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 68.4 bits (166), Expect = 9e-15
 Identities = 24/166 (14%), Positives = 54/166 (32%), Gaps = 14/166 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK--LDILVNAAAGNFLV-PAEDL 67
           A             L   V   +     V       G   L +L+N A          + 
Sbjct: 42  ATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP 101

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG----------GIIINISATL 117
           +       +++++    ++  + L  LK     ++                 + +I+   
Sbjct: 102 NRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT 161

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
             +A +  +    +KAA++   R+LA++   D  + V    PG ++
Sbjct: 162 SGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQ 206

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 63.8 bits (154), Expect = 6e-13
 Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 16/208 (7%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           +   L+  V    +     I L+ DV +      +       + K D  V++        
Sbjct: 39  QNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQ 98

Query: 64  AEDLSPN-----GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
            +    N     GF+   +I S     M       L  G            ++ +S    
Sbjct: 99  LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGS----------ALLTLSYLGA 148

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
             A      +  AKA++++  R +A   G    +RVN I+ GPI+  A        ++ +
Sbjct: 149 ERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLA 207

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDA 206
                    +     D+  +A +L SD 
Sbjct: 208 HCEAVTPIRRTVTIEDVGNSAAFLCSDL 235

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.4 bits (148), Expect = 2e-12
 Identities = 38/190 (20%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 22  AIGLEGDVRKREDAVRVVEST--INHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEI 78
            I ++G+    E    ++E T       ++D +   A G      +          +I+ 
Sbjct: 43  NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 102

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
               + I    A  +LK GG           +    A      T   I    AKAAV  +
Sbjct: 103 SVWSSAIAAKLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHL 152

Query: 139 TRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           T SLA +  G      V  I P  + DT    K  P    S          +     I+ 
Sbjct: 153 TSSLAAKDSGLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISE 202

Query: 198 AAL-YLASDA 206
             L +    +
Sbjct: 203 HLLKWTTETS 212

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 6e-12
 Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 15/200 (7%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           + +  L  A  AL         L+ DVR  +      E         D+LV  A    L 
Sbjct: 40  KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV--DVLVCNAGLGLLG 97

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E L  +   +V++++ VGT  M    L  +K+ G G         ++   +       
Sbjct: 98  PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG--------RVLVTGSVGGLMGL 149

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKA 180
            +     A+K A++ +  SLA+     + + ++ I  GP+  TA + K+  +PEE+  + 
Sbjct: 150 PFNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPV-HTAFMEKVLGSPEEVLDR- 206

Query: 181 TDYMAAYKFGEKWDIAMAAL 200
           TD    ++F +    +    
Sbjct: 207 TDIHTFHRFYQYLAHSKQVF 226

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 57.4 bits (137), Expect = 1e-10
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 20/219 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                 +++ ++ + +  +        V        +V +   H+G+ D+LVN A+  + 
Sbjct: 52  PNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP 111

Query: 62  VPAEDLSPNGFRT--------------VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 107
            P      +G                 +   +++  + +       +           + 
Sbjct: 112 TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR--GTN 169

Query: 108 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167
             IIN+   +           + AK A++ +TRS ALE      IRVNG+ PG       
Sbjct: 170 YSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDD 228

Query: 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
           +     E  RSK        +     +++   ++L S  
Sbjct: 229 MPPAVWEGHRSKVP---LYQRDSSAAEVSDVVIFLCSSK 264

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 55.9 bits (133), Expect = 3e-10
 Identities = 42/203 (20%), Positives = 67/203 (33%), Gaps = 7/203 (3%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
               L   V  +          E DV K E    +  S     G LD +V++ A      
Sbjct: 39  LNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEA 98

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            E       ++        +     E    LK          +G  ++ +S         
Sbjct: 99  LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN------NGASVLTLSYLGSTKYMA 152

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
           +   +  AKAA++S  R LA++ G  + IRVN ++ GPI+  A         I       
Sbjct: 153 HYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEIN 211

Query: 184 MAAYKFGEKWDIAMAALYLASDA 206
               K     ++  A +YL S  
Sbjct: 212 APLRKNVSLEEVGNAGMYLLSSL 234

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 31/213 (14%), Positives = 55/213 (25%), Gaps = 14/213 (6%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLVPAED 66
           L +A   +  + I    +  D+   E   + +   +    K +D LV  A          
Sbjct: 21  LEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLG 80

Query: 67  ------------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
                       L       + +       ++   A  +L       A +   G      
Sbjct: 81  NVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140

Query: 115 ATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 173
           A + H       +  + +K A+    R  A  WG                         P
Sbjct: 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP 200

Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
               S A       +  E  ++A    +L S A
Sbjct: 201 RYGESIAKFVPPMGRRAEPSEMASVIAFLMSPA 233

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 47.0 bits (110), Expect = 3e-07
 Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 11/188 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKRE--DAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDL 67
            +  L         LE D+R  +  D +      +     L++L  NA           +
Sbjct: 44  ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAV 103

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN------ISATLHYTA 121
                   ++ ++V   ++    L  LKK  +   S   G           I  ++    
Sbjct: 104 RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT 163

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                    +K+A+++ T+SL+++      I    + PG +  T      AP ++ +   
Sbjct: 164 DGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWV-KTDMGGSSAPLDVPTSTG 221

Query: 182 DYMAAYKF 189
             +     
Sbjct: 222 QIVQTISK 229

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 37.0 bits (84), Expect = 9e-04
 Identities = 39/185 (21%), Positives = 59/185 (31%), Gaps = 7/185 (3%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
                             E     FG +DILV++ A    V    L  +    +      
Sbjct: 93  KANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLA----- 147

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
              I                  +  G  I             Y   +S+AKAA++S TR 
Sbjct: 148 --AISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRV 205

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 201
           LA E G    IRVN I+ GP+   A  +    + +   + +     K     ++  AA +
Sbjct: 206 LAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAF 265

Query: 202 LASDA 206
           L S  
Sbjct: 266 LVSPL 270

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.0 bits (81), Expect = 0.002
 Identities = 32/230 (13%), Positives = 61/230 (26%), Gaps = 54/230 (23%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVN--AAAGNFLVPAEDLSPNGFRTVIEID 79
                 ++ +      V       +GK+++LV+  A A        + S  G+   +   
Sbjct: 87  KNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKS 146

Query: 80  SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 139
           S     +C   +  +K      + +      +        ++    +            T
Sbjct: 147 SYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALES---------DT 197

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAG-------------------------------- 167
           R LA   G +Y IR+N I+ GP+K  A                                 
Sbjct: 198 RVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNS 257

Query: 168 -----------VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
                       +    +     +  Y    +     DI   A +L S  
Sbjct: 258 GEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRE 307

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	208
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.97
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.97
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.97
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.97
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.97
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.96
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.96
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.93
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.91
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.4
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.18
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.03
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.02
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.95
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.91
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.89
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.86
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.85
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.82
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.76
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.69
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.65
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.65
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.63
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.61
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.6
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.58
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.55
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.48
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.36
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.28
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.27
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.25
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.79
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.73
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.33
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	96.57
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.57
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	94.59
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.85
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	84.82
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	82.32

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.5e-45  Score=278.39  Aligned_cols=197  Identities=28%  Similarity=0.333  Sum_probs=181.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.++++..+.++..+++|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        40 ~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl  119 (251)
T d2c07a1          40 ISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNL  119 (251)
T ss_dssp             EESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeee
Confidence            47999999999999998888999999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|+++|.|++++        +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       120 ~~~~~~~~~~~~~m~~~~--------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~V~PG  190 (251)
T d2c07a1         120 NSLFYITQPISKRMINNR--------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPG  190 (251)
T ss_dssp             THHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hhhhhhhhhcCcccccCC--------CeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccC
Confidence            999999999999999987        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++....  +++..+.+...+|++|+++|+|+|++++||+|++++
T Consensus       191 ~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  236 (251)
T d2c07a1         191 FISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSG  236 (251)
T ss_dssp             SBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            9999976543  345667788889999999999999999999999863

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.5e-45  Score=276.83  Aligned_cols=197  Identities=30%  Similarity=0.440  Sum_probs=182.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++++.+.++.+++||++|+++++++++++.+++|++|++|||||+..+.++ +.+.++|++++++|+
T Consensus        41 ~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl  119 (255)
T d1fmca_          41 SDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNV  119 (255)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHH
Confidence            3689999999999999988899999999999999999999999999999999999998877665 789999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.++|+|++++        +|+||++||..+..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       120 ~~~~~~~~~~~~~m~~~~--------~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG  190 (255)
T d1fmca_         120 FSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPG  190 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEEC
T ss_pred             HHhhhhHHHHHhhhcccc--------ccccccccccchhccccccccchhHHHHHHHHHHHHHHHhC-ccCeEEEEeeeC
Confidence            999999999999999987        78999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++......+ +..+.+....|++|+++|+|+|++++||+|+.++
T Consensus       191 ~i~T~~~~~~~~~-e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~  237 (255)
T d1fmca_         191 AILTDALKSVITP-EIEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS  237 (255)
T ss_dssp             SBCSHHHHTTCCH-HHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cCcChHhhccCCH-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999987655544 4556677889999999999999999999998763

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.9e-45  Score=276.56  Aligned_cols=195  Identities=25%  Similarity=0.317  Sum_probs=181.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      .|+++.++++.++++..+.++.++++|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+.
T Consensus        33 ~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~  112 (244)
T d1edoa_          33 ARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT  112 (244)
T ss_dssp             SSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhh
Confidence            57889999999999988889999999999999999999999999999999999999998899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++|.++|+|++++        +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|+. ++|||||+|+||+
T Consensus       113 ~~~~~~~~~~~~m~~~~--------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrvN~I~PG~  183 (244)
T d1edoa_         113 GVFLCTQAATKIMMKKR--------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA-SRNINVNVVCPGF  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECS
T ss_pred             hHHHHHHHHHHHHHHcC--------CcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChHHHHHHHh-hhCcEEEEEecce
Confidence            99999999999999887        79999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhc-CCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~a  207 (208)
                      ++|++....  .++..+......|++|+++|+|+|++++||+ |+++
T Consensus       184 i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a  228 (244)
T d1edoa_         184 IASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             BCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGG
T ss_pred             eccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchh
Confidence            999876543  3445567778899999999999999999996 8765

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.9e-45  Score=279.04  Aligned_cols=199  Identities=25%  Similarity=0.339  Sum_probs=183.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++++.+.++..+++|++|+++++++++++.+++|+||++|||||.....++.+.+.++|++++++|+
T Consensus        32 ~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl  111 (257)
T d2rhca1          32 CARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL  111 (257)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHh
Confidence            47999999999999999888999999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      .+++.++|+++|+  |++++        .|+||+++|..+..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||+|+
T Consensus       112 ~g~~~~~~~~~p~~~~~~~~--------~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~  182 (257)
T d2rhca1         112 TGVFRVTKQVLKAGGMLERG--------TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RTGITVNAVC  182 (257)
T ss_dssp             HHHHHHHHHHHTTTSHHHHT--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEE
T ss_pred             hhhhHHHHHHhHHHHHHhcC--------CcccccccccccccccccchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEe
Confidence            9999999999997  45555        68999999999999999999999999999999999999999 9999999999


Q ss_pred             cCcccCCCccC---------CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          159 PGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       159 pG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ||+|+|++...         ....++....+...+|++|+++|+|+|++++||||++++
T Consensus       183 PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~  241 (257)
T d2rhca1         183 PGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA  241 (257)
T ss_dssp             ECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             eCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999987542         223455667778889999999999999999999998763

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=4.3e-45  Score=276.64  Aligned_cols=200  Identities=24%  Similarity=0.285  Sum_probs=181.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++.+.+.++..++||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++++++|+
T Consensus        31 ~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl  110 (255)
T d1gega_          31 ADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINV  110 (255)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcc
Confidence            47999999999999999888999999999999999999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++|+++|+|.+++.       +++||++||..+..+.++++.|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       111 ~g~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG  182 (255)
T d1gega_         111 KGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLA-PLGITVNGYCPG  182 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             cchhhhhhhhcchhhhhcc-------ccccccccchhhcccCcccccchhCHHHHHhhHHHHHHHhh-hhCcEEEEEecC
Confidence            9999999999999887652       58899999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++....         .........+...+|++|+++|+|+|++++||+|++++
T Consensus       183 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~  239 (255)
T d1gega_         183 IVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  239 (255)
T ss_dssp             SBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            9999875432         11223445567788999999999999999999998763

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.5e-45  Score=276.23  Aligned_cols=199  Identities=31%  Similarity=0.433  Sum_probs=181.5

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++.+. +.++..+++|++|+++++++++++.+++|+||+||||||+....++.+.+.++|++++++|
T Consensus        35 ~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vN  114 (251)
T d1vl8a_          35 ASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVN  114 (251)
T ss_dssp             EESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhh
Confidence            368999999999988654 7789999999999999999999999999999999999999888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~  158 (208)
                      +.+++.++|.++|+|++++        +|+||+++|..+. .+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+
T Consensus       115 l~~~~~~~~~~~~~m~~~~--------~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~  185 (251)
T d1vl8a_         115 LFGTYYVCREAFSLLRESD--------NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIA  185 (251)
T ss_dssp             THHHHHHHHHHHHHHTTCS--------SCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hhhhhhhhhhhhhcccccc--------cccccccccchhccccCccccchHHHHHhHHHHHHHHHHHhc-ccCeEEEEEe
Confidence            9999999999999999877        7999999998664 5778899999999999999999999999 9999999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ||+|+|++......+.+..+.+...+|++|+++|+|+|++++||+|++++
T Consensus       186 PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~  235 (251)
T d1vl8a_         186 PGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAK  235 (251)
T ss_dssp             ECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             eCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhC
Confidence            99999998765545555667778889999999999999999999998763

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.1e-45  Score=276.28  Aligned_cols=199  Identities=31%  Similarity=0.460  Sum_probs=181.9

Q ss_pred             CCc-HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            2 GRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      +|+ ++.++++.+++++.+.++..++||++|+++++++++++.+++|+||++|||||...+.++.+.+.++|++++++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl  117 (261)
T d1geea_          38 YRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNL  117 (261)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhc
Confidence            565 5578999999999888999999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.++|+|++++.       ++.||++||..+..+.+++..|+++|+|+.+|+++|+.|++ ++|||||+|+||
T Consensus       118 ~g~~~~~~~~~~~m~~~~~-------g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG  189 (261)
T d1geea_         118 TGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPG  189 (261)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             ccchhHHHHHhhhhccccc-------cccccccccchhcccCccccccccCCccchhhHHHHHHHhh-hhCcEEEEEeeC
Confidence            9999999999999988762       45699999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++......+++....+...+|++|+++|+|+|++++||+|++++
T Consensus       190 ~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~  237 (261)
T d1geea_         190 AINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEAS  237 (261)
T ss_dssp             SBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            999998665444455666778889999999999999999999998763

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=8.9e-45  Score=275.56  Aligned_cols=199  Identities=23%  Similarity=0.341  Sum_probs=183.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++++++.+++.+.+.++..+.||++|+++++++++++.+++|++|++|||||.... .++.+.+.++|++++++|
T Consensus        35 ~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vn  114 (260)
T d1zema1          35 LDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTIN  114 (260)
T ss_dssp             EESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhcccc
Confidence            4799999999999999888899999999999999999999999999999999999998754 788999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++|.++|+|++++        +|+||++||..+..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||+|+|
T Consensus       115 l~~~~~~~~~~~~~m~~~~--------~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~P  185 (260)
T d1zema1         115 VTGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA-PYNIRVNAISP  185 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             ccccccchhhHHhhhhhhc--------CCCCCeeechhhccCCcchHHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEecc
Confidence            9999999999999999887        89999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccC--------------CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          160 GPIKDTAGVS--------------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       160 G~v~t~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+|++...              ...++...+.+...+|++|+++|+|+|++++||+|++++
T Consensus       186 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~  248 (260)
T d1zema1         186 GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSS  248 (260)
T ss_dssp             CSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGT
T ss_pred             CcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999986421              123455667778889999999999999999999998763

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.2e-44  Score=274.63  Aligned_cols=199  Identities=27%  Similarity=0.372  Sum_probs=182.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhC-CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++++++.+++...+.++..++||++|+++++++++++.++++ ++|++|||||.....++.+.+.++|++++++|
T Consensus        38 ~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vN  117 (259)
T d2ae2a_          38 CSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSIN  117 (259)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcc
Confidence            37999999999999999888899999999999999999999999987 79999999999888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++|.++|.|++++        +|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       118 l~~~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~P  188 (259)
T d2ae2a_         118 FEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGP  188 (259)
T ss_dssp             THHHHHHHHHHHHHHHHTS--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEE
T ss_pred             cceeEEEEeeccchhhhhc--------ccccccccccccccccccccchHHHHHHHHHHHHHHHHHhC-cCceEEEEeee
Confidence            9999999999999999887        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCCCCh---HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          160 GPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       160 G~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+|++.......   ++....+...+|++|+++|+|+|++++||+|++++
T Consensus       189 G~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~  240 (259)
T d2ae2a_         189 GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAAS  240 (259)
T ss_dssp             CSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            99999876543332   23445667789999999999999999999998763

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.6e-45  Score=272.87  Aligned_cols=194  Identities=25%  Similarity=0.258  Sum_probs=178.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++.   .+...+.+|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        34 ~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl  110 (243)
T d1q7ba_          34 TATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNL  110 (243)
T ss_dssp             EESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceee
Confidence            3789999999998883   4678899999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.++|+|++++        +|+||++||..+..+.++.+.|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       111 ~~~~~~~~~~~~~m~~~~--------~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela-~~gIrVN~I~PG  181 (243)
T d1q7ba_         111 SSVFRLSKAVMRAMMKKR--------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA-SRGITVNVVAPG  181 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             chhhhhHHHHHHHHHHcC--------CCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecc
Confidence            999999999999999887        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++.....  ++.........|++|+++|+|+|++++||+|++++
T Consensus       182 ~i~T~~~~~~~--~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  227 (243)
T d1q7ba_         182 FIETDMTRALS--DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA  227 (243)
T ss_dssp             SBCCHHHHTSC--HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             eEechhhhhhh--hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            99998765443  23445677789999999999999999999998763

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.6e-44  Score=272.44  Aligned_cols=199  Identities=26%  Similarity=0.359  Sum_probs=179.6

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~   77 (208)
                      ++|+.++++++.+++...  +.++..++||++|+++++++++++.+++|+||+||||||+..+ .++.+.+.++|+++++
T Consensus        34 ~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~  113 (258)
T d1iy8a_          34 VDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS  113 (258)
T ss_dssp             EESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhh
Confidence            468999999999998765  4578899999999999999999999999999999999997654 6788899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.++|++.|.|++++        +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|+. ++|||||+|
T Consensus       114 vNl~g~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~i  184 (258)
T d1iy8a_         114 INLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAI  184 (258)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEE
T ss_pred             hhccchhhhhhhhHhhhhhhc--------CCCCcccccHhhccCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCceEEEE
Confidence            999999999999999999887        79999999999999999999999999999999999999999 999999999


Q ss_pred             ecCcccCCCccCC------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          158 APGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       158 ~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +||+|+|++....      .......+.+...+|++|+++|+|+|++++||+|++++
T Consensus       185 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~  241 (258)
T d1iy8a_         185 APGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDAS  241 (258)
T ss_dssp             EECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred             eeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999875432      12344556677788999999999999999999998763

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.1e-44  Score=272.69  Aligned_cols=198  Identities=25%  Similarity=0.318  Sum_probs=173.0

Q ss_pred             CCc-HHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRR-KTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~-~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+ .+.++++.+++.+. +.++.++++|++|+++++++++++.+++|+||+||||||.....++.+.+.++|++++++|
T Consensus        35 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vN  114 (260)
T d1x1ta1          35 GFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN  114 (260)
T ss_dssp             CCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhcc
Confidence            565 67788999888664 6789999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++|.++|+|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+|
T Consensus       115 l~g~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~P  185 (260)
T d1x1ta1         115 LSAVFHGTAAALPHMKKQG--------FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA-GQGITANAICP  185 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEE
T ss_pred             ccccccccchhhhhHhhcC--------CceEeecccccceeccCCcchhhhhhhhHHHhHHHHHHHhc-hhCcEEEEEec
Confidence            9999999999999999987        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCCCC----------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          160 GPIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       160 G~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+|++......          +....+.+...+|++|+++|+|+|++++||||+.++
T Consensus       186 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~  244 (260)
T d1x1ta1         186 GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAA  244 (260)
T ss_dssp             CCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGT
T ss_pred             CCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence            9999997654321          122234466788999999999999999999998763

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.6e-44  Score=273.76  Aligned_cols=198  Identities=24%  Similarity=0.329  Sum_probs=150.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++++++.+++...+.++..+.||++++++++++++++.+++ |++|++|||||.....++.+.+.++|++++++|
T Consensus        38 ~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vN  117 (259)
T d1xq1a_          38 CARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTN  117 (259)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHH
Confidence            4799999999999999888899999999999999999999999998 689999999999988999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++|.++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++|+.|++ ++|||||+|+|
T Consensus       118 l~g~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~V~P  188 (259)
T d1xq1a_         118 LESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAP  188 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHS--------SCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEC
T ss_pred             hhhheeeehhhhhcccccc--------cccccccccccccccccccccccccccchhhhhHHHHHHhc-ccCeEEEEecc
Confidence            9999999999999999887        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+|++..... +++..+......|++|+++|+|+|++++||||++++
T Consensus       189 G~i~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  236 (259)
T d1xq1a_         189 AVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS  236 (259)
T ss_dssp             CSCC--------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             CcccCHHhhhhc-hHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999999765543 334556677889999999999999999999998763

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.2e-44  Score=271.31  Aligned_cols=196  Identities=28%  Similarity=0.333  Sum_probs=163.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|++.  ++..+.++..+.++..++||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++++++|+.
T Consensus        36 ~~~~~--~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~  113 (247)
T d2ew8a1          36 DLVPA--PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVD  113 (247)
T ss_dssp             ESSCC--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             ECCch--HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehh
Confidence            45443  2344556666888999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++|+++|+|++++        +|+||++||..+..+.++...|+++|+|+.+|+++|+.|++ ++|||||+|+||+
T Consensus       114 ~~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~  184 (247)
T d2ew8a1         114 SGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG-KDGITVNAIAPSL  184 (247)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             hhhHHHHHHHhHHHhcC--------CCCccccccchhcccCcccccchhhhccHHHHHHHHHHHhc-ccCeEEEEEeeCC
Confidence            99999999999999987        79999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|++......+...........|++|+++|+|+|++++||+|+.++
T Consensus       185 i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~  231 (247)
T d2ew8a1         185 VRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDAS  231 (247)
T ss_dssp             C------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGT
T ss_pred             CCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhc
Confidence            99998765443333333333446889999999999999999998763

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.2e-43  Score=268.65  Aligned_cols=197  Identities=27%  Similarity=0.342  Sum_probs=178.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++   +.++..++||++|+++++++++++.+++|+||++|||||.....++.+.+.++|++++++|+
T Consensus        35 ~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl  111 (256)
T d1k2wa_          35 ADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINV  111 (256)
T ss_dssp             EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceee
Confidence            368999999988887   67899999999999999999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++|.++|.|.+++.       +|+||++||..+..+.+++..|+++|+|+.+|+++++.|++ ++|||||+|+||
T Consensus       112 ~g~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG  183 (256)
T d1k2wa_         112 SGTLFMMQAVARAMIAGGR-------GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI-RHGINVNAIAPG  183 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             eccccchhhccchhHHhcc-------CCccccccchhhccccccccchhhhhhHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            9999999999999876542       68999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCC---------CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +++|++....         ....+....+...+|++|+++|+|+|++++||+|++++
T Consensus       184 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~  240 (256)
T d1k2wa_         184 VVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEAD  240 (256)
T ss_dssp             CBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGT
T ss_pred             CCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            9999975421         22334556677889999999999999999999999863

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.3e-43  Score=266.25  Aligned_cols=189  Identities=28%  Similarity=0.286  Sum_probs=173.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++.   .++.++++|++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl  112 (244)
T d1nffa_          36 GDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNL  112 (244)
T ss_dssp             EESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhccc
Confidence            3689999999888874   4688899999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.+.|.|++++        +|+||++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       113 ~~~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG  183 (244)
T d1nffa_         113 TGVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG-PSGIRVNSIHPG  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             chhhHHHHHHHhHHHhcC--------cceEEeccccccccccccccchhhHHHHHHHHHHHHHHHhc-ccCEEEEEEeeC
Confidence            999999999999999987        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++.....       ......|++|+++|+|+|++++||+|++++
T Consensus       184 ~i~T~~~~~~~-------~~~~~~pl~R~~~p~diA~~v~fL~s~~s~  224 (244)
T d1nffa_         184 LVKTPMTDWVP-------EDIFQTALGRAAEPVEVSNLVVYLASDESS  224 (244)
T ss_dssp             CBCSGGGTTSC-------TTCSCCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CccChhHhhhh-------HHHHhccccCCCCHHHHHHHHHHHhChhhC
Confidence            99998754321       123457999999999999999999998763

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.5e-43  Score=264.36  Aligned_cols=187  Identities=16%  Similarity=0.180  Sum_probs=172.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++.+.+.++..+.||++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        38 ~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl  117 (240)
T d2bd0a1          38 SSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNL  117 (240)
T ss_dssp             EESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEee
Confidence            36899999999999999888899999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .|++.++|.++|+|++++        +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+||
T Consensus       118 ~g~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~~la~el~-~~gIrvn~i~PG  188 (240)
T d2bd0a1         118 KGTFFLTQALFALMERQH--------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPG  188 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEEC
T ss_pred             hHHHHHHHHHhHHHHhcC--------CCceEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEeeeC
Confidence            999999999999999887        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +|+|+++......           ...++++|+|+|++++||+++++
T Consensus       189 ~v~T~~~~~~~~~-----------~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         189 AVYTPMWGKVDDE-----------MQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             CBCSTTTCCCCST-----------TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             cccCchhhhcCHh-----------hHhcCCCHHHHHHHHHHHHcCCc
Confidence            9999976543211           11346799999999999999875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=2.1e-43  Score=266.56  Aligned_cols=198  Identities=25%  Similarity=0.303  Sum_probs=178.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++.. +.++.+++||++|+++++++++++.+++|+||++|||||.....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl  114 (251)
T d1zk4a1          36 TGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNL  114 (251)
T ss_dssp             EESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccc
Confidence            47899999999999864 45789999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHH--hcCCCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e--~~~~~gi~v~~v~  158 (208)
                      .+++.++|.++|+|++++.       +++||++||..+..+.++...|+++|+|+.+|+++++.|  +. ++|||||+|+
T Consensus       115 ~g~~~~~~~~~~~m~~~~~-------gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~-~~gIrVN~I~  186 (251)
T d1zk4a1         115 DGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK-DYDVRVNTVH  186 (251)
T ss_dssp             HHHHHHHHHHHHHHTTSSS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEE
T ss_pred             cccchhHHHHHHHHHhcCC-------CCceEeeeccceeccCCCchhHHHHHHHHhcchHHHHHHHhcC-CCcEEEEEEe
Confidence            9999999999999998762       358999999999999999999999999999999999998  56 8899999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ||+|+|++......++ .........|++|+++|+|+|++++||+|+.++
T Consensus       187 PG~i~T~~~~~~~~~~-~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  235 (251)
T d1zk4a1         187 PGYIKTPLVDDLPGAE-EAMSQRTKTPMGHIGEPNDIAYICVYLASNESK  235 (251)
T ss_dssp             ECCBCCHHHHTSTTHH-HHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CCCCCChhHHhcCCHH-HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            9999999876654433 334455678999999999999999999998763

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.9e-43  Score=262.45  Aligned_cols=192  Identities=29%  Similarity=0.373  Sum_probs=168.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+++.. ++.+++     ...+++||++|+++++++++++.+++|+||++|||||...+.++.+.+.++|++++++|+.
T Consensus        36 ~~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~  109 (248)
T d2d1ya1          36 DLRPEGK-EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT  109 (248)
T ss_dssp             ESSTTHH-HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH
T ss_pred             ECCHHHH-HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhh
Confidence            5666553 333433     2456899999999999999999999999999999999998899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      +++.++|+++|+|++++        +|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||+
T Consensus       110 g~~~~~~~~~p~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~  180 (248)
T d2d1ya1         110 APMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGA  180 (248)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             hHhhhhhhhcccccccc--------cccccccccccccccccccchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCC
Confidence            99999999999999887        79999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCC----CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          162 IKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       162 v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|++....    ..++...+.+....|++|+++|+|+|++++||+|++++
T Consensus       181 v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~  231 (248)
T d2d1ya1         181 IATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKAS  231 (248)
T ss_dssp             BCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999875432    22334556677888999999999999999999998763

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-42  Score=260.19  Aligned_cols=191  Identities=28%  Similarity=0.353  Sum_probs=171.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++     ++..+.||++|+++++++++++.+++|+||++|||||+..+.++.+.+.++|++++++|+
T Consensus        35 ~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl  109 (242)
T d1ulsa_          35 CDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL  109 (242)
T ss_dssp             EESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccc
Confidence            368888888877655     467799999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.++|.|++++        .+.|+++|| .+..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       110 ~~~~~~~~~~~~~m~~~~--------~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG  179 (242)
T d1ulsa_         110 TGSFLVAKAASEAMREKN--------PGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTRTLALELG-RWGIRVNTLAPG  179 (242)
T ss_dssp             HHHHHHHHHHHHHHTTTC--------CEEEEEECC-GGGGCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hhhhhhhhhccccccccc--------cceeeeecc-ccccCCCCCcchHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeC
Confidence            999999999999998876        677777766 5678889999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++....  ++...+.....+|++|+++|+|+|++++||+|++++
T Consensus       180 ~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~  225 (242)
T d1ulsa_         180 FIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESS  225 (242)
T ss_dssp             SBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhC
Confidence            9999976543  445667788889999999999999999999998763

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.8e-43  Score=266.93  Aligned_cols=194  Identities=28%  Similarity=0.260  Sum_probs=174.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++   +.++.++++|++++++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        35 ~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~  111 (254)
T d1hdca_          35 ADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINL  111 (254)
T ss_dssp             EESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHh
Confidence            368888888887776   55788999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.++|+|++++        +|+||++||..+..+.++...|+++|+|+.+|+++|+.|++ ++|||||+|+||
T Consensus       112 ~~~~~~~~~~~p~m~~~~--------~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG  182 (254)
T d1hdca_         112 TGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG-TDRIRVNSVHPG  182 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHhhcC--------CCeecccccchhcccccchhhHHHHHHHHHHHHHHHHHHhC-CCceEEEEeeeC
Confidence            999999999999999887        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCC-CHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++......+  .........|++|++ +|+|+|++++||+|++++
T Consensus       183 ~v~T~~~~~~~~~--~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~  229 (254)
T d1hdca_         183 MTYTPMTAETGIR--QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSS  229 (254)
T ss_dssp             SBCCHHHHHHTCC--CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGT
T ss_pred             cccCccchhcCHH--HHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhC
Confidence            9999876433221  123445668999997 699999999999998763

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=6.6e-42  Score=259.19  Aligned_cols=199  Identities=23%  Similarity=0.312  Sum_probs=179.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++++++.++++..+..++++.||+++.++++++++++.+++ |.+|++|||||.....++.+.+.++|++++++|
T Consensus        36 ~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n  115 (258)
T d1ae1a_          36 CSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTN  115 (258)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhc
Confidence            4799999999999999988889999999999999999999999998 589999999999998999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.+++++.|.|.++.        .|+||++||..+..+.+++..|+++|+|+.+|++.+++|++ ++|||||+|+|
T Consensus       116 l~~~~~~~~~~~~~m~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~P  186 (258)
T d1ae1a_         116 FEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAP  186 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             ccccccccccccccccccc--------ccccccccccccccccccchhHHHHHHHHHHHHHHHHHhcC-cCcEEEEEEee
Confidence            9999999999999999987        89999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCCCC----hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          160 GPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       160 G~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+++|++......    ..+....+....|++|+++|+|+|++++||+|++++
T Consensus       187 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~  239 (258)
T d1ae1a_         187 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAAS  239 (258)
T ss_dssp             CSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence            9999997655432    345667777889999999999999999999998763

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-42  Score=260.80  Aligned_cols=191  Identities=30%  Similarity=0.405  Sum_probs=169.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++++++.+++    .++.++.||++|+++++++++++.+++|+||++|||||... ..++.+.+.++|++++++|
T Consensus        36 ~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vN  111 (250)
T d1ydea1          36 CDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELN  111 (250)
T ss_dssp             EESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHh
Confidence            368888888877765    35788999999999999999999999999999999999765 4567789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++|+++|+|+++         +|+||++||..+..+.++...|+++|+|+.+|+++|+.|++ ++|||||+|+|
T Consensus       112 l~g~~~~~~~~~p~m~~~---------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~P  181 (250)
T d1ydea1         112 LLGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES-PYGVRVNCISP  181 (250)
T ss_dssp             THHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             hhhHHHHHHHhhHHHHhC---------CCCCcccccccccccccCcchhHHHHhhHHHHHHHHHHHhc-ccCeEEEEEee
Confidence            999999999999999865         58999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCC----CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          160 GPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       160 G~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|+|++....    ..+...........|++|+++|+|+|++++||+|+
T Consensus       182 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd  231 (250)
T d1ydea1         182 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE  231 (250)
T ss_dssp             CSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred             CCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            99999875431    22334445566678999999999999999999986

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3e-42  Score=260.42  Aligned_cols=195  Identities=28%  Similarity=0.315  Sum_probs=173.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++   +.+...+++|++|+++++++++++.+++|++|++|||||...+.++.+.+.++|++++++|+
T Consensus        36 ~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl  112 (253)
T d1hxha_          36 SDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINT  112 (253)
T ss_dssp             ECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhh
Confidence            478999999998887   56788999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCC--CCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~--~gi~v~~v~  158 (208)
                      .+++.++|.++|+|+++         +|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ +  +|||||+|+
T Consensus       113 ~~~~~~~~~~~~~m~~~---------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~g~~IrVN~I~  182 (253)
T d1hxha_         113 ESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR-KQGYAIRVNSIH  182 (253)
T ss_dssp             HHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhc---------CCceecccchhhhcCccccccccchhHHHHHHHHHHHHHHh-hcCCCEEEEEEe
Confidence            99999999999999754         69999999999999999999999999999999999999997 6  469999999


Q ss_pred             cCcccCCCccCCCC---hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          159 PGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       159 pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ||+|+|++......   .++.........|++|+++|+|+|++++||+|++++
T Consensus       183 PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~  235 (253)
T d1hxha_         183 PDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESS  235 (253)
T ss_dssp             ESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGT
T ss_pred             ECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhC
Confidence            99999987643322   223333444556788999999999999999998763

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.5e-42  Score=256.07  Aligned_cols=176  Identities=24%  Similarity=0.300  Sum_probs=154.2

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      +..+++|++|+++++++++++.+++|++|++|||||+..+.++.+.+.++|++++++|+.+++.++|.++|+|++++   
T Consensus        47 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~---  123 (237)
T d1uzma1          47 LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK---  123 (237)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---
T ss_pred             ceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC---
Confidence            46689999999999999999999999999999999998889999999999999999999999999999999999987   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhh
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  181 (208)
                           +|+||++||..+..+.++...|+++|+|+.+|+++|+.|+. ++|||||+|+||+|+|++....  ++.......
T Consensus       124 -----~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~  195 (237)
T d1uzma1         124 -----FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRAL--DERIQQGAL  195 (237)
T ss_dssp             -----CEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHS--CHHHHHHHG
T ss_pred             -----CCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeeeCcCCChhhhcc--CHHHHHHHH
Confidence                 78999999999999999999999999999999999999999 9999999999999999876542  344556777


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ..+|++|+++|+|+|++++||+|++++
T Consensus       196 ~~~pl~R~~~pedvA~~v~fL~S~~s~  222 (237)
T d1uzma1         196 QFIPAKRVGTPAEVAGVVSFLASEDAS  222 (237)
T ss_dssp             GGCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            889999999999999999999999763

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.5e-41  Score=256.89  Aligned_cols=198  Identities=23%  Similarity=0.242  Sum_probs=171.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC--CCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~   78 (208)
                      ++|++++++++.+++...+ .+.+++||++|+++++++++++.+++|++|++|||||.....  .+.+.+.++|++++++
T Consensus        36 ~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~v  114 (268)
T d2bgka1          36 ADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDI  114 (268)
T ss_dssp             EESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHH
Confidence            4789999999999997644 578899999999999999999999999999999999986653  5778999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      |+.+++.++|.++|+|++++        +|+||+++|..+..+.++ ...|+++|+|+.+|+++++.|++ ++|||||+|
T Consensus       115 Nl~g~~~~~~~~~~~m~~~~--------~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I  185 (268)
T d2bgka1         115 NVYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCV  185 (268)
T ss_dssp             HTHHHHHHHHHHHHHHGGGT--------CEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             hhcchhhhhhhhcchHhhcC--------CCCccccccccccccccccccccchhHHHHHhCHHHHHHHhC-hhCeEEEec
Confidence            99999999999999999887        799999999999887655 45899999999999999999999 999999999


Q ss_pred             ecCcccCCCccCCCCh-HHHHHh--hhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          158 APGPIKDTAGVSKLAP-EEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +||+|+|++....... ......  .....|++|+++|+|+|++++||+|++++
T Consensus       186 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~  239 (268)
T d2bgka1         186 SPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESK  239 (268)
T ss_dssp             EESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGT
T ss_pred             CCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhC
Confidence            9999999987665432 222222  22235778999999999999999998763

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-41  Score=259.50  Aligned_cols=197  Identities=23%  Similarity=0.291  Sum_probs=168.7

Q ss_pred             CCCcHHHHHHHHHHHHhcC---CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC----CCCCHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA----EDLSPNGFR   73 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~----~~~~~~~~~   73 (208)
                      ++|++++++++.+++.+.+   .++..++||++|+++++++++++.+++|+||++|||||...+.++    .+.+.++|+
T Consensus        35 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~  114 (272)
T d1xkqa_          35 TGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYH  114 (272)
T ss_dssp             EESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHH
Confidence            4799999999999998764   358899999999999999999999999999999999998876554    356777899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeE
Q 028508           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (208)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~  153 (208)
                      +++++|+.+++.++|+++|+|+++.        ++.|+++||.++..+.+++..|+++|+|+.+|+|+|+.|++ ++|||
T Consensus       115 ~~~~vNl~~~~~~~~~~~p~m~~~~--------g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIr  185 (272)
T d1xkqa_         115 KTLKLNLQAVIEMTKKVKPHLVASK--------GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIR  185 (272)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCE
T ss_pred             HHHHhhhhHHHHHHHhhcccccccC--------CccccccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhc-ccCeE
Confidence            9999999999999999999998764        34444445567788999999999999999999999999999 99999


Q ss_pred             EEEeecCcccCCCccCCCChHH-------HHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          154 VNGIAPGPIKDTAGVSKLAPEE-------IRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       154 v~~v~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ||+|+||+|+|++......++.       ........+|++|+++|+|+|++++||||++
T Consensus       186 VN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~  245 (272)
T d1xkqa_         186 VNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRN  245 (272)
T ss_dssp             EEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             EEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999998765443222       2233446689999999999999999999964

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-41  Score=255.10  Aligned_cols=192  Identities=24%  Similarity=0.293  Sum_probs=172.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++.    .+..+.+|++|++++++++    +++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        37 ~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl  108 (244)
T d1pr9a_          37 VSRTQADLDSLVRECP----GIEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNL  108 (244)
T ss_dssp             EESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHH----TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHH----HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhh
Confidence            4689999988887763    4778999999999987765    4579999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.+++.++|.|.++..       .|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~-------~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG  180 (244)
T d1pr9a_         109 RAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPT  180 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hhhhHHHHHhhhHHHHhCC-------cceEeecccccccccccchhhhhhhHHHHHHHHHHHHHHhC-CCcEEEEEEeeC
Confidence            9999999999998765432       69999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++......+..........+|++|+++|+|+|++++||+|+.++
T Consensus       181 ~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~  228 (244)
T d1pr9a_         181 VVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG  228 (244)
T ss_dssp             CBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            999998777666666677788889999999999999999999999763

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-41  Score=260.33  Aligned_cols=198  Identities=32%  Similarity=0.504  Sum_probs=178.0

Q ss_pred             CCCcHHHHHHHHHHHHhc-----CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-----GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~   75 (208)
                      ++|+.++++++.++|.+.     +.++..++||++|+++++++++++.+++|++|++|||||.....++.+.+.++|+++
T Consensus        42 ~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~  121 (297)
T d1yxma1          42 ASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV  121 (297)
T ss_dssp             EESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhh
Confidence            368999999999999753     567899999999999999999999999999999999999988889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.++|+++|.|++++        .++||++|+ .+..+.++...|+++|+|+.+|+|+++.|++ ++|||||
T Consensus       122 ~~vNl~g~~~~~~~~~~~m~~~~--------~g~Ii~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN  191 (297)
T d1yxma1         122 LETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRIN  191 (297)
T ss_dssp             HHHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECC-CCTTCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEE
T ss_pred             hcccccchhhHHHHHHHhhcccc--------ccccccccc-cccccccccccchhHHHHHHHHHHHHHHHhc-ccCceEE
Confidence            99999999999999999999887        788998866 4567789999999999999999999999999 9999999


Q ss_pred             EeecCcccCCCccCCCC--hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          156 GIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+||+|+|++......  .+++.+.....+|++|+++|+|+|++++||||++++
T Consensus       192 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~  246 (297)
T d1yxma1         192 CVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS  246 (297)
T ss_dssp             EEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGT
T ss_pred             EeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            99999999998655432  334556677788999999999999999999999763

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-41  Score=255.39  Aligned_cols=192  Identities=23%  Similarity=0.283  Sum_probs=171.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.+++    ..+..+.+|++|++++++++    +++|++|+||||||.....++.+.+.++|++++++|+
T Consensus        35 ~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl  106 (242)
T d1cyda_          35 VTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKAL----GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNL  106 (242)
T ss_dssp             EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHh
Confidence            368888888877765    34778999999999987665    4579999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.+.|.|++++.       +|+||+++|..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       107 ~~~~~~~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrvN~I~PG  178 (242)
T d1cyda_         107 RSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPT  178 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             ccchHHHHHhchhhhhhcc-------cCcccccchhhccccCCccccccchHHHHHHHHHHHHHHhC-ccCeecccCCCC
Confidence            9999999999999776542       68999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +++|++......+++.........|++|+++|+|+|++++||+|++++
T Consensus       179 ~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~  226 (242)
T d1cyda_         179 VVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA  226 (242)
T ss_dssp             CBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999998766555666777788899999999999999999999998763

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.8e-41  Score=255.15  Aligned_cols=193  Identities=17%  Similarity=0.214  Sum_probs=170.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++......      .+++|+++.++++++++++.+++|+||++|||||+... .++.+.+.++|++.+++|
T Consensus        30 ~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vn  103 (252)
T d1zmta1          30 HDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEAL  103 (252)
T ss_dssp             CCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHH
Confidence            46777777776544322      34689999999999999999999999999999998654 788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+++.++|+++|+|++++        +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+|
T Consensus       104 l~~~~~~~~~~~~~m~~~~--------~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela-~~gIrVN~I~P  174 (252)
T d1zmta1         104 QIRPFALVNAVASQMKKRK--------SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYNIPVFAIGP  174 (252)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCCEEEEEE
T ss_pred             hHHHHHHHHHHHHhhcccc--------cceeecccccccccccccccccccccccHHHHHHHHHHHhc-ccCcEEEEEec
Confidence            9999999999999999987        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCCCC------hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          160 GPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       160 G~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+|++......      .++.........|++|+++|+|+|++++||+|++++
T Consensus       175 G~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~  229 (252)
T d1zmta1         175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCD  229 (252)
T ss_dssp             SSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCG
T ss_pred             CCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999987655432      234456677889999999999999999999999863

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.3e-41  Score=254.94  Aligned_cols=196  Identities=27%  Similarity=0.319  Sum_probs=161.5

Q ss_pred             CCCcHHHHHHHHHHHHhcC---CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFR   73 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~   73 (208)
                      ++|++++++++.+++.+.+   .++..+++|++++++++++++++.+++|++|++|||||...+    ..+.+.+.++|+
T Consensus        35 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~  114 (264)
T d1spxa_          35 TGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD  114 (264)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHH
Confidence            4799999999999998864   358899999999999999999999999999999999998643    345667899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc-cccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~-~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      +++++|+.+++.++|.++|+|+++.         |.+|+++|. ++..+.++...|+++|+|+.+|+|+|+.|++ ++||
T Consensus       115 ~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gI  184 (264)
T d1spxa_         115 ATLNLNLRSVIALTKKAVPHLSSTK---------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGI  184 (264)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTC
T ss_pred             HHHHHhHHHHHHHHhhhCCcccccc---------CcceeeeeeccccccCCCchhhhhhhhhHHHHHHHHHHHhc-ccCe
Confidence            9999999999999999999998764         556666665 4678999999999999999999999999999 9999


Q ss_pred             EEEEeecCcccCCCccCCCCh-------HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          153 RVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      |||+|+||+|+|++......+       ..........+|++|+++|+|+|++++||+|++
T Consensus       185 rVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~  245 (264)
T d1spxa_         185 RVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRK  245 (264)
T ss_dssp             EEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred             EEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            999999999999976543221       223345567789999999999999999999954

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.5e-41  Score=256.38  Aligned_cols=196  Identities=23%  Similarity=0.287  Sum_probs=171.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTV   75 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~   75 (208)
                      ++|++++++++.+++.+.+.   ++..+.+|++|+++++++++++.+++|++|++|||||....  ..+.+.+.++|+++
T Consensus        34 ~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~  113 (274)
T d1xhla_          34 TGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT  113 (274)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHH
Confidence            36999999999999988753   57899999999999999999999999999999999997644  34455688999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.++|++.|+|++++        ++.|+++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||
T Consensus       114 ~~vNl~~~~~~~~~~~~~m~~~~--------~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN  184 (274)
T d1xhla_         114 FKLNFQAVIEMTQKTKEHLIKTK--------GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVN  184 (274)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTT--------CEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEE
T ss_pred             Hhhcccccccccccccccccccc--------cccccchhhhhccccCCCCceehhhhhHHHHHHHHHHHHHh-HhCCcee
Confidence            99999999999999999999876        78999999999999999999999999999999999999999 9999999


Q ss_pred             EeecCcccCCCccCCCChH-------HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          156 GIAPGPIKDTAGVSKLAPE-------EIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+||+|+|++.......+       .+.......+|++|+++|+|+|++++||+|+
T Consensus       185 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~  241 (274)
T d1xhla_         185 SVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR  241 (274)
T ss_dssp             EEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred             eeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCC
Confidence            9999999999765443221       1222334567999999999999999999995

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.3e-40  Score=252.69  Aligned_cols=198  Identities=20%  Similarity=0.338  Sum_probs=175.5

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++.+. +.++..++||++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|
T Consensus        39 ~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N  118 (260)
T d1h5qa_          39 IYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVN  118 (260)
T ss_dssp             EESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhcccccccccccc
Confidence            368888898888888654 7789999999999999999999999999999999999999888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      +.+++.++|.+.|+|+++..       .+.|++++|.....       +.++...|+++|+|+.+|+|+++.|++ ++||
T Consensus       119 ~~g~~~~~~~~~~~m~~~~~-------~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gI  190 (260)
T d1h5qa_         119 VFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGI  190 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTE
T ss_pred             ccchhhhhhhhccccccccc-------ceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhc-hhCe
Confidence            99999999999999976542       67888888876543       346788999999999999999999999 9999


Q ss_pred             EEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |||+|+||+|+|++....  +++..+.....+|++|+++|+|+|++++||+|++++
T Consensus       191 rvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~  244 (260)
T d1h5qa_         191 RVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHAT  244 (260)
T ss_dssp             EEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred             EEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhC
Confidence            999999999999876543  345566778889999999999999999999999863

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.1e-40  Score=250.51  Aligned_cols=196  Identities=24%  Similarity=0.389  Sum_probs=175.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+++.++++.+++.+.+.+++.+.||++|+++++++++++.+++|+||++|||||.....++.+.+.++|++.+++|+.
T Consensus        38 ~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~  117 (259)
T d1ja9a_          38 GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR  117 (259)
T ss_dssp             SSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccc
Confidence            57788899999999999999999999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-cccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.++|.++|+|++          ++.+++++|..+ ..+.+++..|+++|+|+.+|+|+|++|++ ++|||||+|+||
T Consensus       118 ~~~~~~~~~~~~m~~----------~g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~-~~gIrvN~I~PG  186 (259)
T d1ja9a_         118 GQFFVAQQGLKHCRR----------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPG  186 (259)
T ss_dssp             HHHHHHHHHHHHEEE----------EEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             eeeeehhhhhhhhhc----------CCcccccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHh-hcCeEEeccCcC
Confidence            999999999999965          466777766655 44789999999999999999999999999 999999999999


Q ss_pred             cccCCCccC-----------CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVS-----------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +++|++...           ...++++.+.+....|++|+++|+|||++++||+|++++
T Consensus       187 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~  245 (259)
T d1ja9a_         187 GVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESE  245 (259)
T ss_dssp             CBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999986421           123456677788889999999999999999999999863

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-39  Score=246.68  Aligned_cols=199  Identities=22%  Similarity=0.219  Sum_probs=172.6

Q ss_pred             CCCcHHHHHHHHHHHHhcC--CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|++++++++.+++.+.+  .++++++||++++++++++++++.+++|+||++|||||...+.++.+.+.++|++.+++
T Consensus        40 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  119 (257)
T d1xg5a_          40 CARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNV  119 (257)
T ss_dssp             EESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhh
Confidence            3699999999999999875  46788999999999999999999999999999999999998899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc--CCchhHHHHhHHHHHHHHHHHHHHh--cCCCCeEE
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEW--GTDYAIRV  154 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~--~~~~gi~v  154 (208)
                      |+.+++.+++.++|.|++++.+      +|+||++||..+...  .+....|+++|+|+.+|+++|+.|+  . ++||||
T Consensus       120 nl~~~~~~~~~~~~~~~~~~~~------~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~-~~~I~v  192 (257)
T d1xg5a_         120 NVLALSICTREAYQSMKERNVD------DGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA-QTHIRA  192 (257)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTCC------SCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEE
T ss_pred             hhhHHHHHHHHHHHHHHHhccC------CCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhC-CCCEEE
Confidence            9999999999999999876421      589999999998754  5667789999999999999999998  6 789999


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|+||+++|++......  ...+......|++|+++|+|+|++++||+|++++
T Consensus       193 n~i~PG~i~t~~~~~~~~--~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~  244 (257)
T d1xg5a_         193 TCISPGVVETQFAFKLHD--KDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAH  244 (257)
T ss_dssp             EEEEESCBCSSHHHHHTT--TCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             EEEeCCCCCChhhhhcCh--hhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhc
Confidence            999999999886543321  1234566778999999999999999999999863

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=246.60  Aligned_cols=193  Identities=27%  Similarity=0.317  Sum_probs=168.0

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~   78 (208)
                      ++|+.++++++.+++...  +.++.++.||++|+++++++++++.+++|++|++|||||...        .++|++++++
T Consensus        33 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~--------~~~~~~~~~~  104 (254)
T d2gdza1          33 VDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------EKNWEKTLQI  104 (254)
T ss_dssp             EESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC--------SSSHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccc--------cccchheeee
Confidence            379999999999999765  457889999999999999999999999999999999999754        3458999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHH--HHHHhcCCCCeEEEE
Q 028508           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS--LALEWGTDYAIRVNG  156 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~--la~e~~~~~gi~v~~  156 (208)
                      |+.+++.+++.++|+|.++..+.     +|+||++||..+..+.++++.|+++|+|+.+|+|+  |+.|+. ++|||||+
T Consensus       105 n~~~~~~~~~~~~~~m~~~~~~~-----~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~-~~gIrVN~  178 (254)
T d2gdza1         105 NLVSVISGTYLGLDYMSKQNGGE-----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM-NSGVRLNA  178 (254)
T ss_dssp             HTHHHHHHHHHHHHHHCGGGTCC-----CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ehhhHHHHHHHHHHHHHHhhcCC-----CcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence            99999999999999998764221     58999999999999999999999999999999997  688999 99999999


Q ss_pred             eecCcccCCCccCCCChH------HHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPE------EIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+||+|+|++........      +....+...+|++|+++|+|+|++++||+|+++
T Consensus       179 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~  235 (254)
T d2gdza1         179 ICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA  235 (254)
T ss_dssp             EEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTT
T ss_pred             EEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCCC
Confidence            999999999765443321      233456677899999999999999999999864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.2e-39  Score=244.45  Aligned_cols=191  Identities=25%  Similarity=0.354  Sum_probs=162.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++   +.++.+++||++++++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        35 ~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~  111 (241)
T d2a4ka1          35 VDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNL  111 (241)
T ss_dssp             EESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhcccccccccccc
Confidence            368888777665554   67899999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      .+++.++|.+.|++.+.          +.|+++|+ .+..+.+++..|+++|+|+++|+++|++|++ ++|||||+|+||
T Consensus       112 ~~~~~~~k~~~~~~~~~----------~~i~~~ss-~a~~~~~~~~~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG  179 (241)
T d2a4ka1         112 TGSFLVARKAGEVLEEG----------GSLVLTGS-VAGLGAFGLAHYAAGKLGVVGLARTLALELA-RKGVRVNVLLPG  179 (241)
T ss_dssp             HHHHHHHHHHHHHCCTT----------CEEEEECC-CTTCCHHHHHHHHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEEC
T ss_pred             ccccccccccccccccc----------cceeeccc-cccccccCccccchhhHHHHHHHHHHHHHHh-HhCCEEeeeccC
Confidence            99999999999987653          44555444 5566668899999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +++|++... . +++..+.+....|++|+++|+|+|++++||+|+.++
T Consensus       180 ~v~T~~~~~-~-~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~  225 (241)
T d2a4ka1         180 LIQTPMTAG-L-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESA  225 (241)
T ss_dssp             SBCCGGGTT-S-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cCCCHHHHh-h-hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhC
Confidence            999987643 2 345566777889999999999999999999998763

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-39  Score=247.18  Aligned_cols=195  Identities=21%  Similarity=0.197  Sum_probs=163.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~   77 (208)
                      +|+.+..++ .+++...+.+...+++|++|+++++++++++.+++|++|++|||||....    ..+.+.+.++|+..++
T Consensus        41 ~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~  119 (256)
T d1ulua_          41 YQAERLRPE-AEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE  119 (256)
T ss_dssp             ESSGGGHHH-HHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHH
T ss_pred             eCcHHHHHH-HHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhh
Confidence            455444444 44445555678889999999999999999999999999999999998653    3567788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|+.+++.++|.+.|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|
T Consensus       120 vn~~~~~~~~~~~~~~~~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~I  188 (256)
T d1ulua_         120 VSAYSLVAVARRAEPLLRE----------GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAI  188 (256)
T ss_dssp             HHTHHHHHHHHHHTTTEEE----------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEE
T ss_pred             hhHHHHHHHHHHHHHHhcc----------CCEEEEEeehHhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCCEEeee
Confidence            9999999999999998865          58999999999999999999999999999999999999999 999999999


Q ss_pred             ecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +||+|+|++.......++..+......|++|+++|+|+|++++||+|++++
T Consensus       189 ~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  239 (256)
T d1ulua_         189 SAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLAS  239 (256)
T ss_dssp             EECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             ccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            999999988776655666777888899999999999999999999999763

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=3.5e-39  Score=246.59  Aligned_cols=191  Identities=22%  Similarity=0.271  Sum_probs=165.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-----CCCCCHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-----AEDLSPNGFRTV   75 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-----~~~~~~~~~~~~   75 (208)
                      ++|++++++++.+++   +.++..+.+|++++++++++++++.+++|++|++|||||......     ..+.+.+.|+++
T Consensus        35 ~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~  111 (276)
T d1bdba_          35 LDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV  111 (276)
T ss_dssp             EESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHH
T ss_pred             EECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHH
Confidence            468999998887776   557899999999999999999999999999999999999765432     244455679999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +++|+.+++.++|.++|.|+++         +|+||+++|..+..+.++...|+++|+|+.+|+|+|+.|++ ++ ||||
T Consensus       112 ~~vNl~g~~~~~~~~~p~m~~~---------~g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~-IrVN  180 (276)
T d1bdba_         112 FHINVKGYIHAVKACLPALVAS---------RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PY-VRVN  180 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEE
T ss_pred             HHHhhHHHHHHHHHHHHHHHhc---------CCCceeeeechhccCCCCCchHHHHHHHHHHHHHHHHHHhh-cc-eEEc
Confidence            9999999999999999999876         58899999999999999999999999999999999999998 75 9999


Q ss_pred             EeecCcccCCCccCCC--------ChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          156 GIAPGPIKDTAGVSKL--------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +|+||+|+|++.....        ...+........+|++|+++|+|+|++++||||+
T Consensus       181 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~  238 (276)
T d1bdba_         181 GVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATR  238 (276)
T ss_dssp             EEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCH
T ss_pred             ccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence            9999999998754321        1223445667779999999999999999999984

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-38  Score=236.56  Aligned_cols=183  Identities=15%  Similarity=0.125  Sum_probs=165.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++...+.+++.+.||++|+++++++++++.+++|++|++|||||......+.+.+.+.|++++++|+
T Consensus        37 ~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~  116 (244)
T d1yb1a_          37 WDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNV  116 (244)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceee
Confidence            47999999999999999898999999999999999999999999999999999999999888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcC--CCCeEEEEee
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIA  158 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~--~~gi~v~~v~  158 (208)
                      .|++.+++.++|.|++++        +|+||++||..+..+.++++.|+++|+|+.+|+++|+.|+.+  .+||+|+.|+
T Consensus       117 ~g~~~l~~~~lp~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~  188 (244)
T d1yb1a_         117 LAHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLC  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTT--------CEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred             eccHHHHHHHhhhHHhcC--------CceEEEeecchhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEE
Confidence            999999999999999887        799999999999999999999999999999999999999861  2689999999


Q ss_pred             cCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhc
Q 028508          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA  203 (208)
Q Consensus       159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  203 (208)
                      ||+|+|++....            ..+..+..+|+++|+.++..+
T Consensus       189 PG~v~T~~~~~~------------~~~~~~~~~pe~va~~i~~~~  221 (244)
T d1yb1a_         189 PNFVNTGFIKNP------------STSLGPTLEPEEVVNRLMHGI  221 (244)
T ss_dssp             ETHHHHCSTTCT------------HHHHCCCCCHHHHHHHHHHHH
T ss_pred             cCCCCChhhhCc------------CccccCCCCHHHHHHHHHHHH
Confidence            999999875432            112345778999999988754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.2e-38  Score=238.70  Aligned_cols=195  Identities=29%  Similarity=0.394  Sum_probs=171.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 028508            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (208)
Q Consensus         3 R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (208)
                      |+.+.++++.+++++.+.++.++++|++|++++.++++++.+.+|++|++|||+|.....++.+.+.++|++++++|+.+
T Consensus        51 ~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~  130 (272)
T d1g0oa_          51 NSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG  130 (272)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccce
Confidence            45778899999999999899999999999999999999999999999999999999888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      ++.++|.+.|+|++          .|++++++|..+. .+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|+||+
T Consensus       131 ~~~~~~~~~~~m~~----------~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~-~~gIrVN~I~PG~  199 (272)
T d1g0oa_         131 QFFVAREAYKHLEI----------GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGG  199 (272)
T ss_dssp             HHHHHHHHHHHSCT----------TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECC
T ss_pred             eeeecccccccccc----------ccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHhc-hhCeEEEEEccCC
Confidence            99999999999976          4778888877654 4678889999999999999999999999 9999999999999


Q ss_pred             ccCCCccCC----------CChHHH-HHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          162 IKDTAGVSK----------LAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       162 v~t~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+|++....          ...++. .......+|++|+++|+|||++++||+|++++
T Consensus       200 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~  257 (272)
T d1g0oa_         200 IKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGG  257 (272)
T ss_dssp             BSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            999864321          112222 23455778999999999999999999998763

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.2e-38  Score=235.86  Aligned_cols=171  Identities=21%  Similarity=0.265  Sum_probs=153.3

Q ss_pred             eeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 028508           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (208)
Q Consensus        22 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (208)
                      ..++.||+++.      ++.+.+++|++|++|||||.....++.+.+.++|++++++|+.+++.++|.++|.|++++   
T Consensus        46 ~~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---  116 (234)
T d1o5ia_          46 HRYVVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG---  116 (234)
T ss_dssp             SEEEECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             CcEEEcchHHH------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc---
Confidence            34578999864      455667889999999999998888999999999999999999999999999999999877   


Q ss_pred             CCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhh
Q 028508          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (208)
Q Consensus       102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  181 (208)
                           .|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++...... +.......
T Consensus       117 -----~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~~~~-~~~~~~~~  189 (234)
T d1o5ia_         117 -----WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELLS-EEKKKQVE  189 (234)
T ss_dssp             -----CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHSC-HHHHHHHH
T ss_pred             -----cccccccccccccccccccccchhHHHHHHHHHHHHHHHhc-ccCeEEeecccCccchhhhhhhcC-HHHHHHHH
Confidence                 79999999999999999999999999999999999999999 999999999999999997655443 34456677


Q ss_pred             hhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          182 DYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ...|++|+++|+|+|++++||||++++
T Consensus       190 ~~~pl~R~~~pediA~~v~fL~S~~s~  216 (234)
T d1o5ia_         190 SQIPMRRMAKPEEIASVVAFLCSEKAS  216 (234)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhChhhc
Confidence            889999999999999999999998763

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-37  Score=240.66  Aligned_cols=182  Identities=19%  Similarity=0.231  Sum_probs=161.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|+.+.++++.+++...   ...+.+|+++.++++++++++.+++|+||+||||||+..+.++.+.+.++|++++++|+.
T Consensus        47 ~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~  123 (302)
T d1gz6a_          47 GKGSSAADKVVEEIRRR---GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR  123 (302)
T ss_dssp             BCCSHHHHHHHHHHHHT---TCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhhc---ccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeeh
Confidence            56778889999988764   345678999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCc
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~  161 (208)
                      |++.++|.++|+|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+||+
T Consensus       124 g~~~~~~~~~p~m~~~~--------~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~-~~gIrVN~I~PG~  194 (302)
T d1gz6a_         124 GSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNA  194 (302)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEEC
T ss_pred             hhHHHHHHhHHHHHhCC--------CcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHh-ccCCceeeeCCCC
Confidence            99999999999999987        79999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      +.|++... .. +.          +.+.++|+|+|++++||||+.+
T Consensus       195 ~~t~~~~~-~~-~~----------~~~~~~PedvA~~v~fL~S~~a  228 (302)
T d1gz6a_         195 GSRMTETV-MP-ED----------LVEALKPEYVAPLVLWLCHESC  228 (302)
T ss_dssp             CSTTTGGG-SC-HH----------HHHHSCGGGTHHHHHHHTSTTC
T ss_pred             CCcchhhc-Cc-Hh----------hHhcCCHHHHHHHHHHHcCCCc
Confidence            97654322 11 11          1235689999999999999865

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=238.02  Aligned_cols=190  Identities=22%  Similarity=0.224  Sum_probs=158.4

Q ss_pred             HHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus         6 ~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      +++++..+++...+.++..+.||++|++++.++++++.+  |.+|++|||+|.....++.+.+.++|++++++|+.|++.
T Consensus        43 ~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~  120 (285)
T d1jtva_          43 GRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR  120 (285)
T ss_dssp             HHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT--SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc--cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHH
Confidence            445556666656677899999999999999999988754  799999999999988899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                      ++++++|+|++++        +|+||++||.++..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+||+|+|+
T Consensus       121 ~~~~~lp~m~~~~--------~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~~la~El~-~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         121 MLQAFLPDMKRRG--------SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             HHHHHHHHHHHHT--------CEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHcC--------CCceEEEechhhcCCCCCchHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCCCh
Confidence            9999999999887        79999999999999999999999999999999999999999 99999999999999999


Q ss_pred             CccCCCCh-HH--------HHHh------hhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          166 AGVSKLAP-EE--------IRSK------ATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       166 ~~~~~~~~-~~--------~~~~------~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +....... +.        ....      .....+..+.++|+|||+++++++...
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~  247 (285)
T d1jtva_         192 FMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP  247 (285)
T ss_dssp             ------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS
T ss_pred             HHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCC
Confidence            87654321 11        1111      123345567889999999999998654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-37  Score=233.26  Aligned_cols=197  Identities=18%  Similarity=0.101  Sum_probs=169.5

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHH----hCCccEEEeCCCCCCC---CCCCCCCHHH
Q 028508            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH----FGKLDILVNAAAGNFL---VPAEDLSPNG   71 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~----~g~id~lv~~ag~~~~---~~~~~~~~~~   71 (208)
                      ++|+.++++++.++|...  +.++..++||++++++++++++.+.+.    ++.+|++|||||...+   .++.+.++++
T Consensus        39 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~  118 (259)
T d1oaaa_          39 SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAE  118 (259)
T ss_dssp             EESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHH
T ss_pred             EECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHH
Confidence            479999999999999875  446889999999999999999998763    4578999999997653   4577889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508           72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus        72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                      |++++++|+.+++.++|.++|+|++++.      ..|+||++||..+..+.+++..|+++|+|+.+|+++|+.|   .+|
T Consensus       119 ~~~~~~vN~~~~~~l~~~~~~~m~~~~~------~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e---~~g  189 (259)
T d1oaaa_         119 VNNYWALNLTSMLCLTSGTLNAFQDSPG------LSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE---EPS  189 (259)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHTSCCCTT------CEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH---CTT
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHhcCC------CcccccccccccccCCCccchHHHHHHHHHHHHHHHHHhC---CCC
Confidence            9999999999999999999999987541      1479999999999999999999999999999999999998   348


Q ss_pred             eEEEEeecCcccCCCccCC---CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          152 IRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       152 i~v~~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ||||+|+||+|+|++....   ..+++....+....|.+|+++|+|+|+.++||+++.
T Consensus       190 IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         190 VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHC
T ss_pred             CEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhc
Confidence            9999999999999875432   233445566677788999999999999999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4.4e-36  Score=231.56  Aligned_cols=199  Identities=31%  Similarity=0.493  Sum_probs=175.4

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|+.++++++.+++.+. +.++..+.||+++.++++.+++.+.++++++|++|||||.....++.+.+.++|+..+.+|
T Consensus        55 ~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n  134 (294)
T d1w6ua_          55 ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV  134 (294)
T ss_dssp             EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeee
Confidence            478999999999988764 6778899999999999999999999999999999999999888888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.+.+.+.+...+.+.....       .+.+++++|..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~-------~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk~lA~ela-~~gIrVN~I~P  206 (294)
T d1w6ua_         135 LNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQP  206 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             cccchhhhhhhhcccccccc-------cccccccccchhhhcccccchHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEcc
Confidence            99999999998888776542       67899999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCccCCCC-hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          160 GPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       160 G~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      |+|+|++...... .+.........+|++|+++|+|+|++++||||+++
T Consensus       207 G~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s  255 (294)
T d1w6ua_         207 GPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYA  255 (294)
T ss_dssp             CCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             CccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence            9999998765443 34566778888999999999999999999999876

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=228.43  Aligned_cols=189  Identities=23%  Similarity=0.248  Sum_probs=161.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (208)
                      +|++++++++.+     ...+....+|+.+.+.++..    .+.++++|++|||+|.....++.+.+.++|++.+++|+.
T Consensus        37 ~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~----~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~  107 (245)
T d2ag5a1          37 DINESKLQELEK-----YPGIQTRVLDVTKKKQIDQF----ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR  107 (245)
T ss_dssp             ESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHH----HHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHh-----ccCCceeeeecccccccccc----ccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhc
Confidence            577777665433     23477788899877665554    455689999999999999899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      +++.++|.+.|.|.+++        .|+||+++|..+. .+.+++..|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       108 ~~~~~~~~~~~~~~~~~--------~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~-~~gIrvN~I~PG  178 (245)
T d2ag5a1         108 SMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPG  178 (245)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred             cchhHHHhhCcccccCC--------CceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeec
Confidence            99999999999999887        7999999998775 5789999999999999999999999999 999999999999


Q ss_pred             cccCCCccCC----CChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          161 PIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       161 ~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+|++....    ..+......+....|++|+++|+|+|+++.||+|++++
T Consensus       179 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         179 TVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             CEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             eeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence            9999875432    23445566777889999999999999999999998763

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-35  Score=224.64  Aligned_cols=176  Identities=23%  Similarity=0.255  Sum_probs=154.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|++++++++.++|++.+.++.+++||++|.++++++++++.+++|+||+||||||+.......+.+.++|+.++++|+
T Consensus        34 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~  113 (275)
T d1wmaa1          34 TARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNF  113 (275)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHH
Confidence            47999999999999999888999999999999999999999999999999999999998888888888999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccC--------------------------------------
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------------------------------------  122 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--------------------------------------  122 (208)
                      .|++.+++.++|.|++          .|+||+++|..+..+.                                      
T Consensus       114 ~g~~~l~~~~lp~m~~----------~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (275)
T d1wmaa1         114 FGTRDVCTELLPLIKP----------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ  183 (275)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHHHHh----------cCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccc
Confidence            9999999999999965          5899999998764322                                      


Q ss_pred             ---CchhHHHHhHHHHHHHHHHHHHHhcC---CCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHH
Q 028508          123 ---WYQIHVSAAKAAVDSITRSLALEWGT---DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  196 (208)
Q Consensus       123 ---~~~~~y~~sKaa~~~~~~~la~e~~~---~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  196 (208)
                         .+...|+++|+++.+|++.+++|+.+   ..||+||+|+||+|+|++....                 ...+|+|+|
T Consensus       184 ~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-----------------~~~~pee~A  246 (275)
T d1wmaa1         184 KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-----------------ATKSPEEGA  246 (275)
T ss_dssp             TTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-----------------CSBCHHHHT
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-----------------ccCCHHHHH
Confidence               12346999999999999999999851   3599999999999999875432                 134799999


Q ss_pred             HHHHHhc
Q 028508          197 MAALYLA  203 (208)
Q Consensus       197 ~~~~~L~  203 (208)
                      +.++|++
T Consensus       247 ~~~~~~a  253 (275)
T d1wmaa1         247 ETPVYLA  253 (275)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999986

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=6.2e-35  Score=220.20  Aligned_cols=190  Identities=18%  Similarity=0.133  Sum_probs=153.1

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeeEEEcCCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      +|+.++.+++.+..... +.++.++.+|++ +.++++++++++.+++|+||+||||||..        +++.|++++++|
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~--------~~~~~~~~~~vN  107 (254)
T d1sbya1          36 LDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAIN  107 (254)
T ss_dssp             EESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHH
T ss_pred             ECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC--------CHHHHHHHHHHH
Confidence            45555555554433333 346788999998 67789999999999999999999999953        467799999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                      +.|++.+++.++|.|.+++.+     ++|+||+++|..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+|
T Consensus       108 l~g~~~~~~~~~~~m~~~~~~-----~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~el~-~~gIrVn~I~P  181 (254)
T d1sbya1         108 FTGLVNTTTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINP  181 (254)
T ss_dssp             THHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHhhhcccC-----CCceEEEEechhhccCCCCCHHHHHHHHHHHHHHHHHHhhcc-ccCeEEEEEEe
Confidence            999999999999999876421     268999999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|+|++.....................+..+++++|+.++++++.
T Consensus       182 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~  227 (254)
T d1sbya1         182 GITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             CSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH
T ss_pred             CCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC
Confidence            9999987654433333333333334444567899999999887653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.3e-33  Score=213.13  Aligned_cols=200  Identities=19%  Similarity=0.262  Sum_probs=159.0

Q ss_pred             CCcHHHHHHHHHHHHhcC-CCeeEE-----------------EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC
Q 028508            2 GRRKTVLRSAVAALHSLG-IPAIGL-----------------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP   63 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~-~~~~~~-----------------~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~   63 (208)
                      .|+.+.++++.+++...+ .....+                 .+|++++++++++++++.+++|+||+||||||...+.+
T Consensus        34 ~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~  113 (284)
T d1e7wa_          34 HRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP  113 (284)
T ss_dssp             SSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             CCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCc
Confidence            367788899999987653 334444                 55699999999999999999999999999999988888


Q ss_pred             CCCCCHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHH
Q 028508           64 AEDLSPNGFR--------------TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  129 (208)
Q Consensus        64 ~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  129 (208)
                      +.+.+.++|+              ..+.+|+.+++.+++.+.+.+......  .....++||+++|.....+.+++..|+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ii~~~s~~~~~~~~~~~~Y~  191 (284)
T d1e7wa_         114 LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYT  191 (284)
T ss_dssp             CCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHH
T ss_pred             hhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHH--hcCCCCcccccccccccCCccceeeec
Confidence            7777666554              478999999999999999887543210  011268899999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcC-CCCCCHHHHHHHHHHhcCCCCC
Q 028508          130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       130 ~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ++|+|+.+|+++++.|++ ++|||||+|+||++.+...   . ++...+......|+ +|+++|+|+|++++||+|++++
T Consensus       192 asKaal~~lt~~lA~el~-~~gIrvN~I~PG~t~~~~~---~-~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~  266 (284)
T d1e7wa_         192 MAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDD---M-PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAK  266 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGGG---S-CHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cccccchhhhHHHHHHhC-Ccccccccccccccccccc---C-CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999999999 9999999999998654321   2 33445566677775 8999999999999999998763

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-33  Score=212.22  Aligned_cols=197  Identities=19%  Similarity=0.253  Sum_probs=163.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRT   74 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~------~~~~~~~~~~~~~   74 (208)
                      ++|+.++++++.+++   +.+...+.+|+.+.+.++..+..+...++.+|.+++|++....      .++.+.+.++|++
T Consensus        35 ~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (248)
T d2o23a1          35 LDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQR  111 (248)
T ss_dssp             EECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHH
T ss_pred             EeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHH
Confidence            368888898888877   5578889999999999999999999999999999999876543      3456678899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                      ++++|+.+++.+++++.|+|..+...  ....+|+||++||..+..+.++++.|+++|+|+.+|+|+|+.|++ ++||||
T Consensus       112 ~~~vnl~~~~~~~~~~~~~~~~~~~~--~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gIrv  188 (248)
T d2o23a1         112 VLDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRV  188 (248)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEE
T ss_pred             HHhHHHHHHHHHHHHhHHHHHHhhhh--ccCCceEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcce
Confidence            99999999999999999999765311  112368999999999999999999999999999999999999999 999999


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhhcC-CCCCCHHHHHHHHHHhcCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~  205 (208)
                      |+|+||+++|++....  +++.........|+ +|+++|+|||++++||+|+
T Consensus       189 N~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~  238 (248)
T d2o23a1         189 MTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN  238 (248)
T ss_dssp             EEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             eeeccCceecchhhcC--CHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC
Confidence            9999999999876543  23344556667776 8999999999999999974

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.2e-34  Score=225.08  Aligned_cols=171  Identities=23%  Similarity=0.241  Sum_probs=148.3

Q ss_pred             cCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           27 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        27 ~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +|+++.++++.+++.+.+.+|+||++|||+|....  .++.+.+.++|++++++|+.+.+.++|.+.|+|.+        
T Consensus        92 ~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~--------  163 (329)
T d1uh5a_          92 YNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--------  163 (329)
T ss_dssp             HHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc--------
Confidence            47778999999999999999999999999997654  57788999999999999999999999999999854        


Q ss_pred             CCCceEEEeccccccccCCc-hhHHHHhHHHHHHHHHHHHHHhcCC-CCeEEEEeecCcccCCCccC-------------
Q 028508          105 SSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVS-------------  169 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~-~gi~v~~v~pG~v~t~~~~~-------------  169 (208)
                        +|+||++||..+..+.|+ ...|+++|+|+++|+|+|+.||+ + +|||||+|+||+|+|+....             
T Consensus       164 --~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela-~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~  240 (329)
T d1uh5a_         164 --QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             --EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCTTGGGCC-----------
T ss_pred             --ccccccceeehhcccccccchhhhhhhccccccchhhHHHHh-cccCcEEEEEecCcccchhhhcccchhhhhhhhhh
Confidence              689999999999988876 56799999999999999999998 6 59999999999999943221             


Q ss_pred             ------------------------------CCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          170 ------------------------------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       170 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                                                    ....+..........|++|+++|+|+|++++||+|+.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~  309 (329)
T d1uh5a_         241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESR  309 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhC
Confidence                                          111344556677788999999999999999999999763

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.7e-33  Score=209.88  Aligned_cols=195  Identities=18%  Similarity=0.150  Sum_probs=167.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC-----CCCCHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTVI   76 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~-----~~~~~~~~~~~~   76 (208)
                      +|+.+..+. .+++.....+...+.+|+++..++...++++.+.++++|++|+|++......+     .....+.|...+
T Consensus        38 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~  116 (258)
T d1qsga_          38 YQNDKLKGR-VEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH  116 (258)
T ss_dssp             ESSTTTHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHH
T ss_pred             eCCHHHHHH-HHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHH
Confidence            466444444 44555555577889999999999999999999999999999999988654332     235667799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                      ++|+.+.+.+++.+.+.+.+          ++.||++||..+..+.+.+..|+++|+|+.+|+++++.|++ ++|||||+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~----------~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~-~~gIrVN~  185 (258)
T d1qsga_         117 DISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNA  185 (258)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhccC----------CcEEEEecchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhC-ccCceeec
Confidence            99999999999999988754          57799999999999999999999999999999999999999 99999999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      |+||+|+|++..................|++|+++|+|+|++++||||++++
T Consensus       186 I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~  237 (258)
T d1qsga_         186 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA  237 (258)
T ss_dssp             EEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             ccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999998776666667777788899999999999999999999998763

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.4e-32  Score=204.82  Aligned_cols=168  Identities=20%  Similarity=0.185  Sum_probs=142.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHH--HhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIE   77 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~   77 (208)
                      ++|++++++++.+ +.+.+.++.++.||++|+++++++++++.+  .++++|++|||||+... ..+.+.+.++|+++++
T Consensus        35 ~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~  113 (248)
T d1snya_          35 TCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQ  113 (248)
T ss_dssp             EESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred             EECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHH
Confidence            3689988888764 444467899999999999999999999854  67899999999998765 4577889999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCC---CCCCCCCCceEEEeccccccc---cCCchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508           78 IDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                      +|+.|++.+++.++|+|+++..   .......+|++|+++|..+..   +.+++..|+++|+|+.+|+++++.|+. ++|
T Consensus       114 vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~-~~g  192 (248)
T d1snya_         114 TNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQR  192 (248)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGT
T ss_pred             hccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence            9999999999999999987531   112234479999999998764   456778999999999999999999999 899


Q ss_pred             eEEEEeecCcccCCCccCC
Q 028508          152 IRVNGIAPGPIKDTAGVSK  170 (208)
Q Consensus       152 i~v~~v~pG~v~t~~~~~~  170 (208)
                      |+||+|+||+|+|++....
T Consensus       193 I~vn~v~PG~v~T~m~~~~  211 (248)
T d1snya_         193 IMCVSLHPGWVKTDMGGSS  211 (248)
T ss_dssp             CEEEEECCCSBCSTTTCTT
T ss_pred             eEEEEcCCCcccCCccccc
Confidence            9999999999999976543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.1e-31  Score=200.07  Aligned_cols=158  Identities=21%  Similarity=0.199  Sum_probs=145.4

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      ++|++++++++.+++... +..+..+.+|+++.+.+...++.+.+.+|.+|++|+|+|......+.+.+.++|++++++|
T Consensus        44 ~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN  123 (269)
T d1xu9a_          44 TARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN  123 (269)
T ss_dssp             EESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeee
Confidence            479999999999988765 5567889999999999999999999999999999999999888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcC-CCCeEEEEee
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIA  158 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~gi~v~~v~  158 (208)
                      +.+++.+++.++|.|++.         +|+||++||.++..+.+++..|+++|+|+.+|+++|+.|+.. ..||+|++|+
T Consensus       124 ~~~~~~~~~~~lp~m~~~---------~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~  194 (269)
T d1xu9a_         124 FLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV  194 (269)
T ss_dssp             THHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHhc---------CCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEe
Confidence            999999999999999764         689999999999999999999999999999999999999861 3579999999


Q ss_pred             cCcccCCCc
Q 028508          159 PGPIKDTAG  167 (208)
Q Consensus       159 pG~v~t~~~  167 (208)
                      ||+|+|++.
T Consensus       195 PG~v~T~~~  203 (269)
T d1xu9a_         195 LGLIDTETA  203 (269)
T ss_dssp             ECCBCCHHH
T ss_pred             cCcCCCcHH
Confidence            999999754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=7.9e-31  Score=197.49  Aligned_cols=183  Identities=16%  Similarity=0.133  Sum_probs=141.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI   78 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~   78 (208)
                      +|++++++++.+.   .+.+++++.+|++|+++++++++++.+.++  ++|++|||||+..+ .++.+.+.++|++++++
T Consensus        36 ~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~v  112 (250)
T d1yo6a1          36 ARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV  112 (250)
T ss_dssp             ESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHH
Confidence            6888887765432   356799999999999999999999999876  49999999998765 67788999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEecccccccc-------CCchhHHHHhHHHHHHHHHHHHHHhcC
Q 028508           79 DSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYTA-------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (208)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~iv~iss~~~~~~-------~~~~~~y~~sKaa~~~~~~~la~e~~~  148 (208)
                      |+.|++.+++.++|+|+++..+   ...+...+.++++++..+...       ..+...|++||+|+.+|+++|+.|+. 
T Consensus       113 N~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~-  191 (250)
T d1yo6a1         113 NTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-  191 (250)
T ss_dssp             HTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-
T ss_pred             HhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            9999999999999999875321   122344688999988765542       33456799999999999999999998 


Q ss_pred             CCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          149 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       149 ~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ++||+|++|+||+|+|++....                 ...+|+|.+..++.++..
T Consensus       192 ~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e~~a~~~~~~~~~  231 (250)
T d1yo6a1         192 DDNVLVVNFCPGWVQTNLGGKN-----------------AALTVEQSTAELISSFNK  231 (250)
T ss_dssp             GGTCEEEEEECCCC------------------------------HHHHHHHHHHHTT
T ss_pred             ccCeEEEEEecCCCCCCCCCCC-----------------CCCCHHHHHHHHHHHHhc
Confidence            8999999999999999865321                 134677888777776643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.97  E-value=2.2e-30  Score=197.60  Aligned_cols=197  Identities=20%  Similarity=0.107  Sum_probs=149.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCH-HHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP-NGFRTVIEIDS   80 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~n~   80 (208)
                      +|+ +++++..+++.+.+.....+.+|+++++++.++++++.+.+|++|++|+|+|........+... +.+......+.
T Consensus        38 ~r~-~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~  116 (274)
T d2pd4a1          38 YLN-ESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAME  116 (274)
T ss_dssp             ESS-TTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred             eCC-HHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhc
Confidence            566 3455667777777777888999999999999999999999999999999999876533222222 22222222222


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecC
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG  160 (208)
                      ...+...+.....+...+.       .+.|+++++.+...+.+.+..|+++|+|+.+|+++++.|++ ++|||||+|+||
T Consensus       117 ~~~~~~~~~~~~~~~~~~~-------~~~i~~~s~~~~~~~~~~~~~y~asK~al~~ltr~lA~e~~-~~GIrvN~I~PG  188 (274)
T d2pd4a1         117 ISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAG  188 (274)
T ss_dssp             HHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEEC
T ss_pred             ccccccccccccccccccc-------CcceeeecccccccccccchhhhHHHHHHHHHHHhhHHHhc-CcCceecccccC
Confidence            2222222222222222220       35577777777788888999999999999999999999999 999999999999


Q ss_pred             cccCCCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                      ++.|++.......+..........|++|+++|+|+|++++||+|+.+
T Consensus       189 ~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s  235 (274)
T d2pd4a1         189 PIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLS  235 (274)
T ss_dssp             CCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             cccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhh
Confidence            99999877666666777777788999999999999999999999876

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.97  E-value=3.1e-31  Score=204.51  Aligned_cols=170  Identities=25%  Similarity=0.251  Sum_probs=145.8

Q ss_pred             CCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 028508           29 VRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS  106 (208)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~  106 (208)
                      .++..+++++++++.+++|+||++|||||...  ..++.+.+.++|++++++|+.+.+.+++++.+.+.+          
T Consensus       100 ~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~----------  169 (297)
T d1d7oa_         100 GSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP----------  169 (297)
T ss_dssp             HCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------
T ss_pred             hccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhc----------
Confidence            35666778999999999999999999999864  367888999999999999999999999999988765          


Q ss_pred             CceEEEecccccc-ccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhc
Q 028508          107 GGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA  185 (208)
Q Consensus       107 ~~~iv~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~  185 (208)
                      ++.++.+++.... ...+....|+++|+++.++++.++.|+..++|||||+|+||+++|++.......++..+......|
T Consensus       170 ~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~P  249 (297)
T d1d7oa_         170 GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAP  249 (297)
T ss_dssp             EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSS
T ss_pred             CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCC
Confidence            4556666666544 345778889999999999999999999525799999999999999987766556667777888899


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCC
Q 028508          186 AYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       186 ~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      ++|+++|+|+|++++||||++++
T Consensus       250 lgR~~~peevA~~v~fL~S~~a~  272 (297)
T d1d7oa_         250 IQKTLTADEVGNAAAFLVSPLAS  272 (297)
T ss_dssp             SCCCBCHHHHHHHHHHHTSGGGT
T ss_pred             CCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999998763

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.97  E-value=5.1e-29  Score=189.02  Aligned_cols=198  Identities=21%  Similarity=0.243  Sum_probs=155.3

Q ss_pred             CCc-HHHHHHHHHHHHhc-CCCeeEEEcCCC----CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC---------
Q 028508            2 GRR-KTVLRSAVAALHSL-GIPAIGLEGDVR----KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED---------   66 (208)
Q Consensus         2 ~R~-~~~~~~~~~~l~~~-~~~~~~~~~D~~----~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~---------   66 (208)
                      +|+ ....+++.+++.+. +.+...+++|+.    ..+.+.++++++.+++|++|++|||||+..+..+.+         
T Consensus        32 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~  111 (266)
T d1mxha_          32 YRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAAD  111 (266)
T ss_dssp             ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC---------
T ss_pred             ECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhc
Confidence            455 44568888888876 456666665554    467788888999999999999999999877644322         


Q ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHH
Q 028508           67 --LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL  144 (208)
Q Consensus        67 --~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~  144 (208)
                        .....+...+..|+.+.+...+...+.+......   ....+.++++++..+..+.+++..|+++|+|+++|+++++.
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~  188 (266)
T d1mxha_         112 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW---RSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAAL  188 (266)
T ss_dssp             --CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhcccccccccc---ccccccchhhhhccccccCcchhhhhhhHHHHhhhHHHHHH
Confidence              2345577788899999888888877766543211   11257899999999999999999999999999999999999


Q ss_pred             HhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhhhhhcCCCC-CCHHHHHHHHHHhcCCCC
Q 028508          145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDAV  207 (208)
Q Consensus       145 e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~L~s~~a  207 (208)
                      |+. ++|||||+|+||+++|+...    +++..+.+...+|++|. ++|+|+|++++||+|+++
T Consensus       189 e~~-~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~peeva~~v~fL~s~~s  247 (266)
T d1mxha_         189 ELA-PRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDA  247 (266)
T ss_dssp             HHG-GGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGG
T ss_pred             HhC-ccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchh
Confidence            999 99999999999999987543    34556677788898664 899999999999999876

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.3e-29  Score=189.24  Aligned_cols=165  Identities=16%  Similarity=0.044  Sum_probs=139.2

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ..+.+|.++.++.+.+...+.+.++  ++|++|||||.... ..+.+.+.++|++++++|+.+++.+++.+.|+|++   
T Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---  120 (236)
T d1dhra_          44 VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---  120 (236)
T ss_dssp             EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---
T ss_pred             ceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---
Confidence            3457788888888888888877654  79999999997554 45566778999999999999999999999999864   


Q ss_pred             CCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcC-CCCeEEEEeecCcccCCCccCCCChHHHHH
Q 028508          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~  178 (208)
                             +|+||++||.++..+.+++..|+++|+|+.+|+++|+.|+.. ++|||||+|+||+++|++.....       
T Consensus       121 -------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~-------  186 (236)
T d1dhra_         121 -------GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM-------  186 (236)
T ss_dssp             -------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS-------
T ss_pred             -------ccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhC-------
Confidence                   689999999999999999999999999999999999999962 36999999999999998643222       


Q ss_pred             hhhhhhcCCCCCCHHHHHHHHHHhcCCCC
Q 028508          179 KATDYMAAYKFGEKWDIAMAALYLASDAV  207 (208)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~L~s~~a  207 (208)
                         ...+..++.+|+++|+.+.||+++++
T Consensus       187 ---~~~~~~~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         187 ---PEADFSSWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             ---TTSCGGGSEEHHHHHHHHHHHHTTTT
T ss_pred             ---ccchhhcCCCHHHHHHHHHHHhCCCc
Confidence               11223457789999999999999875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.96  E-value=4.1e-29  Score=189.80  Aligned_cols=192  Identities=22%  Similarity=0.131  Sum_probs=151.6

Q ss_pred             CCcHHHHHH-HHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHh---CCccEEEeCCCCCCC-----CCCCCCCHHHH
Q 028508            2 GRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF---GKLDILVNAAAGNFL-----VPAEDLSPNGF   72 (208)
Q Consensus         2 ~R~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~---g~id~lv~~ag~~~~-----~~~~~~~~~~~   72 (208)
                      +|+.+++.+ +.+   ..+.+...++||+++++++.++++.+.+.+   +++|++|||+|+...     .++.+.+.++|
T Consensus        39 ~~~~~~~~~~~~~---~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~  115 (268)
T d2h7ma1          39 GFDRLRLIQRITD---RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV  115 (268)
T ss_dssp             ECSCHHHHHHHHT---TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH
T ss_pred             eCChHHHHHHHHH---HcCCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhh
Confidence            456555422 222   236678889999999999999999998765   579999999997642     35567888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCe
Q 028508           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (208)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi  152 (208)
                      ...+++|+.+.+...+...+.+.           .+.+++++|.....+.|++..|+++|+|+.+|++++++|+. ++||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~-~~gI  183 (268)
T d2h7ma1         116 SKGIHISAYSYASMAKALLPIMN-----------PGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAG-KYGV  183 (268)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEE-----------EEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTC
T ss_pred             hhhhhhhhhHHHHHHHHHhhhcc-----------cccccccccccccccCcccchhhccccchhhccccchhhhh-ccCC
Confidence            99999999999988888765532           34466777777888899999999999999999999999999 9999


Q ss_pred             EEEEeecCcccCCCccCC----CCh------HHHHHhhhhhhcCCC-CCCHHHHHHHHHHhcCCCCC
Q 028508          153 RVNGIAPGPIKDTAGVSK----LAP------EEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       153 ~v~~v~pG~v~t~~~~~~----~~~------~~~~~~~~~~~~~~~-~~~~~dva~~~~~L~s~~a~  208 (208)
                      |||+|+||+|.|++....    ...      +...+......|++| +++|+|+|+++.||+|+.++
T Consensus       184 rVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~  250 (268)
T d2h7ma1         184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLP  250 (268)
T ss_dssp             EEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCT
T ss_pred             cceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999865321    111      223344556678765 89999999999999998763

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=4.2e-28  Score=181.38  Aligned_cols=179  Identities=22%  Similarity=0.265  Sum_probs=143.1

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (208)
                      +...+++|+++......+........ ..+.++.+++....    ......+.+.|++++++|+.+.+.+++.+.+.+..
T Consensus        39 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  117 (241)
T d1uaya_          39 DLIYVEGDVTREEDVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE  117 (241)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             cceEeeccccchhhhHHHHHhhhccc-cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Confidence            34567899999999999998887764 45555666654332    34445778899999999999999999999998654


Q ss_pred             cCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHH
Q 028508           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (208)
Q Consensus        97 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~  176 (208)
                      ...  -.....|+||++||..+..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||+|+||+|+|++..... . ..
T Consensus       118 ~~~--~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~-~-~~  192 (241)
T d1uaya_         118 NPP--DAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQGLP-E-KA  192 (241)
T ss_dssp             CCC--CTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHTSC-H-HH
T ss_pred             hhh--hcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHHHHHHHHh-hcCCceeeecCCcccccccchhh-h-hH
Confidence            321  1112269999999999999999999999999999999999999999 99999999999999998765543 2 23


Q ss_pred             HHhhhhhhcC-CCCCCHHHHHHHHHHhcCC
Q 028508          177 RSKATDYMAA-YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       177 ~~~~~~~~~~-~~~~~~~dva~~~~~L~s~  205 (208)
                      ........|+ +|+++|+|+|++++||+|+
T Consensus       193 ~~~~~~~~~~~~R~g~pedvA~~v~fL~s~  222 (241)
T d1uaya_         193 KASLAAQVPFPPRLGRPEEYAALVLHILEN  222 (241)
T ss_dssp             HHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             HHHHHhcCCCCCCCcCHHHHHHHHHHHHhC
Confidence            3344445554 8999999999999999985

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=5.3e-28  Score=180.29  Aligned_cols=161  Identities=19%  Similarity=0.080  Sum_probs=132.3

Q ss_pred             EEEcCCCCHHHHHHHHHHHHHH--hCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           24 GLEGDVRKREDAVRVVESTINH--FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        24 ~~~~D~~~~~~~~~~~~~~~~~--~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.+|+.+.+......+.+...  +|+||+||||||.... ..+.+.+.+.|+.++++|+.+++.+++.++|+|++    
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~----  120 (235)
T d1ooea_          45 LVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP----  120 (235)
T ss_dssp             ECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE----
T ss_pred             eeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc----
Confidence            3467778788888777777764  5899999999997654 44555667889999999999999999999999865    


Q ss_pred             CCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcC-CCCeEEEEeecCcccCCCccCCCChHHHHHh
Q 028508          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~  179 (208)
                            +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+.. +.||+||+|+||+++|++.....        
T Consensus       121 ------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~--------  186 (235)
T d1ooea_         121 ------GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM--------  186 (235)
T ss_dssp             ------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS--------
T ss_pred             ------ceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC--------
Confidence                  589999999999999999999999999999999999999961 36899999999999997543221        


Q ss_pred             hhhhhcCCCCCCHHHHHHHHHHhcC
Q 028508          180 ATDYMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~L~s  204 (208)
                        ...+..++.+|+++++.+++++.
T Consensus       187 --~~~~~~~~~~~~~va~~~~~~l~  209 (235)
T d1ooea_         187 --PNADHSSWTPLSFISEHLLKWTT  209 (235)
T ss_dssp             --TTCCGGGCBCHHHHHHHHHHHHH
T ss_pred             --cCCccccCCCHHHHHHHHHHHhc
Confidence              22233457799999999875543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.93  E-value=2.5e-25  Score=167.71  Aligned_cols=184  Identities=20%  Similarity=0.227  Sum_probs=128.7

Q ss_pred             HHHHHHHHhcCCCeeEE-------EcCCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL-------EGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~-------~~D~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ..+++.|.+.|.++..+       .+|+.+.+.......++..+. +.+|++|+|||....       .+.|.....+|.
T Consensus        15 ~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~-------~~~~~~~~~~~~   87 (257)
T d1fjha_          15 AATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ-------TKVLGNVVSVNY   87 (257)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT-------CSSHHHHHHHHT
T ss_pred             HHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCc-------HHHHHHHHHHHH
Confidence            45677787778766443       468888888888777666554 579999999986442       344788899999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec---------------------------ccccccc-CCchhHHHHhH
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS---------------------------ATLHYTA-TWYQIHVSAAK  132 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~is---------------------------s~~~~~~-~~~~~~y~~sK  132 (208)
                      .+...+.+...+.+.+..        ...+.++.                           |..+..+ .++...|+++|
T Consensus        88 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asK  159 (257)
T d1fjha_          88 FGATELMDAFLPALKKGH--------QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK  159 (257)
T ss_dssp             HHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhhhc--------cCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHh
Confidence            999999999999887754        33344443                           3333322 23456799999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHHHHhhh-hhhcCCCCCCHHHHHHHHHHhcCCCCC
Q 028508          133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAVQ  208 (208)
Q Consensus       133 aa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~L~s~~a~  208 (208)
                      +|+.+|+|+++.||+ ++|||||+|+||+|+|++......++...+... ...|++|+++|+|+|++++||||++++
T Consensus       160 aal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~  235 (257)
T d1fjha_         160 NALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAAS  235 (257)
T ss_dssp             HHHHHHHHHTHHHHH-HTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGT
T ss_pred             hhhhccccccccccc-cccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            999999999999999 999999999999999998766554444433333 346999999999999999999999863

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.91  E-value=7.6e-25  Score=165.33  Aligned_cols=177  Identities=12%  Similarity=-0.015  Sum_probs=139.3

Q ss_pred             HHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      .+..+++.+++.+.|.++.++.||++|.++++++++.+.+. +++|++|||+|.....++.+.+.++|+.++++|+.+++
T Consensus        47 ~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~  125 (259)
T d2fr1a1          47 ADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGAR  125 (259)
T ss_dssp             STTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-ccccccccccccccccccccccHHHHHHHhhhhccchh
Confidence            45678888888888889999999999999999999987664 68999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                      .+.+.+    ....        .+.||++||..+..+.+++..|+++|+++++|++.++     ..|+++++|+||++.+
T Consensus       126 ~l~~~~----~~~~--------~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~~~-----~~Gi~v~~I~pg~~~~  188 (259)
T d2fr1a1         126 NLHELT----RELD--------LTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRR-----SDGLPATAVAWGTWAG  188 (259)
T ss_dssp             HHHHHH----TTSC--------CSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHHH-----HTTCCCEEEEECCBC-
T ss_pred             HHHHHh----hccC--------CceEeeecchhhccCCcccHHHHHHHHhHHHHHHHHH-----hCCCCEEECCCCcccC
Confidence            987754    3333        6889999999999999999999999999998877664     4589999999999976


Q ss_pred             CCccCCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      +.+......    ..+...  ....++++++++.+..++..
T Consensus       189 ~g~~~~~~~----~~~~~~--G~~~~~~~~~~~~l~~~l~~  223 (259)
T d2fr1a1         189 SGMAEGPVA----DRFRRH--GVIEMPPETACRALQNALDR  223 (259)
T ss_dssp             ---------------CTTT--TEECBCHHHHHHHHHHHHHT
T ss_pred             CccccchHH----HHHHhc--CCCCCCHHHHHHHHHHHHhC
Confidence            644332111    111100  11346899999998887654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=1.1e-11  Score=96.58  Aligned_cols=178  Identities=11%  Similarity=0.029  Sum_probs=116.5

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (208)
                      +++.+..+......++.++++|++|.+++.+++...     .+|+++|.|+......    +.++....+++|+.|+..+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nl  112 (357)
T d1db3a_          42 RVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRL  112 (357)
T ss_dssp             -------------CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHH
T ss_pred             hHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-----CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHH
Confidence            334444433333457889999999999999998865     7999999999865422    2344567789999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEE
Q 028508           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~  155 (208)
                      +.++...-.+.         ..++|++||...+.           +..+...|+.+|.+.+.+++.++..+    |+++.
T Consensus       113 lea~~~~~~~~---------~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~----~l~~~  179 (357)
T d1db3a_         113 LEAIRFLGLEK---------KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY----GMYAC  179 (357)
T ss_dssp             HHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEE
T ss_pred             HHHHHHhCCCC---------CcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCEE
Confidence            99876432221         35799999875431           12346679999999999999988765    48899


Q ss_pred             EeecCcccCCCccCCCChHHHHHhhh----hh---------hcCCCCCCHHHHHHHHHHhcCCC
Q 028508          156 GIAPGPIKDTAGVSKLAPEEIRSKAT----DY---------MAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       156 ~v~pG~v~t~~~~~~~~~~~~~~~~~----~~---------~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .++|+.+.+|..............+.    ..         ...+.+...+|++++++.++...
T Consensus       180 ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~  243 (357)
T d1db3a_         180 NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE  243 (357)
T ss_dssp             EEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS
T ss_pred             EEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC
Confidence            99999999875332222212211111    11         11123567899999999887543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.18  E-value=2.2e-10  Score=89.13  Aligned_cols=169  Identities=18%  Similarity=0.092  Sum_probs=116.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+.+..+++..     .+|+|||+|+....    ..+.++....+++|+.|+..+++.+..........
T Consensus        51 ~~~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlAa~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~  121 (361)
T d1kewa_          51 RYNFEHADICDSAEITRIFEQY-----QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGED  121 (361)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH
T ss_pred             CcEEEEccCCCHHHHHHHHHhC-----CCCEEEECccccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence            5677899999999999988754     79999999986432    12233446789999999999999988765431100


Q ss_pred             CCCCCCCceEEEecccccccc---------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeec
Q 028508          101 QASSSSGGIIINISATLHYTA---------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~---------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~p  159 (208)
                         .....++|++||...+..                     ..+...|+.+|.+.+.+++.++..+    |+++..++|
T Consensus       122 ---~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~----~i~~~~lR~  194 (361)
T d1kewa_         122 ---KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNC  194 (361)
T ss_dssp             ---HHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEE
T ss_pred             ---ccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEec
Confidence               000246999999775421                     1235669999999999999988655    589999999


Q ss_pred             CcccCCCccCCCChHHHHHhhhhhhcC---------CCCCCHHHHHHHHHHhcCC
Q 028508          160 GPIKDTAGVSKLAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       160 G~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~L~s~  205 (208)
                      +.|..|.......-..+.......-+.         +.+...+|++++++.++..
T Consensus       195 ~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~  249 (361)
T d1kewa_         195 SNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTE  249 (361)
T ss_dssp             CEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             CceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhc
Confidence            999987544322112222222222221         1246889999999888753

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.03  E-value=8.1e-09  Score=80.83  Aligned_cols=127  Identities=12%  Similarity=0.068  Sum_probs=96.2

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      +.++.++.+|++|.+.++.+++..     ++|+|||.|+..... ....+.+.....+.+|+.|+..++.++...-.   
T Consensus        66 ~~~i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~---  136 (393)
T d1i24a_          66 GKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE---  136 (393)
T ss_dssp             CCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT---
T ss_pred             CCCcEEEEccCCCHHHHHHHHHhh-----cchheeccccccccc-cccccccccccccccccccccHHHHHHHHhcc---
Confidence            457899999999999999998865     799999999865431 11234566778899999999999998764322   


Q ss_pred             CCCCCCCCCceEEEeccccccc------------------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           99 RGQASSSSGGIIINISATLHYT------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~------------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                              ...+++.||...+.                        +..+...|+.+|.+.+.+++.+..+.    |+++
T Consensus       137 --------~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----~l~~  204 (393)
T d1i24a_         137 --------ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRA  204 (393)
T ss_dssp             --------TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEE
T ss_pred             --------ccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc----ceee
Confidence                    24477777765432                        12234569999999999999887665    5899


Q ss_pred             EEeecCcccCCC
Q 028508          155 NGIAPGPIKDTA  166 (208)
Q Consensus       155 ~~v~pG~v~t~~  166 (208)
                      ..++|+.+..+.
T Consensus       205 ~~lR~~~v~G~~  216 (393)
T d1i24a_         205 TDLNQGVVYGVK  216 (393)
T ss_dssp             EEEEECEEECSC
T ss_pred             eecccccccCCC
Confidence            999999998764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.8e-09  Score=81.19  Aligned_cols=163  Identities=13%  Similarity=0.060  Sum_probs=112.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+.+..++...     .++++++.++....    ....+.....+++|+.|+..++.++.......   
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~~~-----~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~---  124 (347)
T d1t2aa_          57 NMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN---  124 (347)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT---
T ss_pred             CcEEEEeecCCchhhHHHHhhc-----ccceeeeeeecccc----chhhccchhhhhhHHHHHHHHHHHHHHcCCCC---
Confidence            5678999999999999998765     78888888875432    12344456678999999999998876543221   


Q ss_pred             CCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            ..++|++||...+.           +..+...|+.+|.+.+.+++.+...+    |+.+..++|+.+..|....
T Consensus       125 ------~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~----~~~~~ilr~~~vyGp~~~~  194 (347)
T d1t2aa_         125 ------SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRGA  194 (347)
T ss_dssp             ------TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCT
T ss_pred             ------CcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCCC
Confidence                  35799999876432           12345679999999999999887665    4888899999888774333


Q ss_pred             CCChHHHHHh----hhhhh---------cCCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLAPEEIRSK----ATDYM---------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~~~~~~~~----~~~~~---------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ..........    .....         ..+.+...+|++++++.++..
T Consensus       195 ~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         195 NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             TSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS
T ss_pred             CccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhc
Confidence            2222222111    11111         122357889999999988754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.95  E-value=4.2e-09  Score=80.92  Aligned_cols=123  Identities=14%  Similarity=-0.001  Sum_probs=94.7

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++++|++|.+.+.++++..     ++|+|||.|+.....    .+.++....+++|+.|+..+++++...-     
T Consensus        50 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-----  115 (338)
T d1udca_          50 KHPTFVEGDIRNEALMTEILHDH-----AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAAN-----  115 (338)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHHT-----TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             CCCEEEEeecCCHHHHHHHHhcc-----CCCEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHhC-----
Confidence            46888999999999999888753     799999999954321    2234456889999999999999886542     


Q ss_pred             CCCCCCCCceEEEecccccccc------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508          100 GQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                             -.++|++||...+.+            ..+...|+.+|.+.+.+++....+..   ++.+..++|+.+.++.
T Consensus       116 -------v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         116 -------VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGAH  184 (338)
T ss_dssp             -------CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST---TCEEEEEEECEEECCC
T ss_pred             -------CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhcc---CCeEEEEeeccEEecc
Confidence                   245999998775532            13467799999999999988777643   6889999999888764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.91  E-value=1.4e-08  Score=76.87  Aligned_cols=136  Identities=13%  Similarity=0.015  Sum_probs=97.4

Q ss_pred             HHHHHHHHhcCCCeeEE----EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL----EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~----~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (208)
                      ..+++.|.+.|..+..+    .+|+.+.+.+..++..     ..+|.++|+++......   .........+++|+.++.
T Consensus        16 ~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~-----~~~d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~   87 (315)
T d1e6ua_          16 SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFAS-----ERIDQVYLAAAKVGGIV---ANNTYPADFIYQNMMIES   87 (315)
T ss_dssp             HHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHH-----HCCSEEEECCCCCCCHH---HHHHCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhh-----cCCCEEEEcchhccccc---cchhhHHHHHHHHHHHHH
Confidence            45677777665433322    5688899888887753     27999999997644211   123334556788999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----------------CCchhHHHHhHHHHHHHHHHHHHHhcC
Q 028508           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (208)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------------~~~~~~y~~sKaa~~~~~~~la~e~~~  148 (208)
                      .++.++...    +        -.++|++||...+.+                .+....|+.+|.+.+.+++.+..+.  
T Consensus        88 ~ll~~a~~~----~--------v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--  153 (315)
T d1e6ua_          88 NIIHAAHQN----D--------VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY--  153 (315)
T ss_dssp             HHHHHHHHT----T--------CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHc----C--------CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            998887542    2        246999999876532                1234579999999999999998765  


Q ss_pred             CCCeEEEEeecCcccCCCcc
Q 028508          149 DYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       149 ~~gi~v~~v~pG~v~t~~~~  168 (208)
                        |+++..++|+.|..|...
T Consensus       154 --gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         154 --GRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             --CCEEEEEEECEEESTTCC
T ss_pred             --CCCEEEEeeccEECCCCC
Confidence              589999999999987543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.89  E-value=8.1e-09  Score=79.42  Aligned_cols=175  Identities=13%  Similarity=0.006  Sum_probs=111.1

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 028508            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (208)
Q Consensus         2 ~R~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (208)
                      .|+.++...+.......  ......+..|+.|.+++..++.       .+|+++|+++....    ..+   ....+..|
T Consensus        42 vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~~~v~~~a~~~~~----~~~---~~~~~~~n  107 (342)
T d1y1pa1          42 ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGVAHIASVVSF----SNK---YDEVVTPA  107 (342)
T ss_dssp             ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEEEECCCCCSC----CSC---HHHHHHHH
T ss_pred             eCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------cchhhhhhcccccc----ccc---ccccccch
Confidence            46666665554433322  2223457789999988776653       68999999986442    122   34557789


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------------------------------cCCchhHH
Q 028508           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------------------------------ATWYQIHV  128 (208)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------------------------------~~~~~~~y  128 (208)
                      +.|+..+++.+...   ..        -.++|++||..+..                               +..+...|
T Consensus       108 v~gt~~ll~~~~~~---~~--------v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y  176 (342)
T d1y1pa1         108 IGGTLNALRAAAAT---PS--------VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVY  176 (342)
T ss_dssp             HHHHHHHHHHHHTC---TT--------CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHH
T ss_pred             hhhHHHHHHhhhcc---cc--------cccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcc
Confidence            99999988886542   11        35799999975422                               11234569


Q ss_pred             HHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChH---HHHHhhhh--------hhcCCCCCCHHHHHH
Q 028508          129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATD--------YMAAYKFGEKWDIAM  197 (208)
Q Consensus       129 ~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~dva~  197 (208)
                      +.+|.+.+.++..++++..  .++++..++|+.+..|.........   .+......        ..+...+....|+|+
T Consensus       177 ~~sK~~~E~~~~~~~~~~~--~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~  254 (342)
T d1y1pa1         177 AASKTEAELAAWKFMDENK--PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGL  254 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHC--CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHH
T ss_pred             cchhHhHHHHHHHhhhhcc--cccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHHH
Confidence            9999999999999888763  4788899999988876543322111   11111111        111122567889999


Q ss_pred             HHHHhc
Q 028508          198 AALYLA  203 (208)
Q Consensus       198 ~~~~L~  203 (208)
                      +++.++
T Consensus       255 ~~i~~l  260 (342)
T d1y1pa1         255 LHLGCL  260 (342)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            877654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.86  E-value=2.6e-08  Score=76.58  Aligned_cols=157  Identities=16%  Similarity=0.048  Sum_probs=106.3

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|+.|.+.+..++.       ..+.++|.|+.....    ....+....+++|+.|+..++..+...      
T Consensus        52 ~~i~~~~~Di~d~~~~~~~~~-------~~~~v~~~a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~~------  114 (346)
T d1oc2a_          52 DRVELVVGDIADAELVDKLAA-------KADAIVHYAAESHND----NSLNDPSPFIHTNFIGTYTLLEAARKY------  114 (346)
T ss_dssp             SSEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHH------
T ss_pred             CCeEEEEccCCCHHHHHHHHh-------hhhhhhhhhhccccc----chhhCcccceeeehHhHHhhhhhhccc------
Confidence            356788999999999888764       688889998765431    112334567889999999998877543      


Q ss_pred             CCCCCCCCceEEEecccccccc-----------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEE
Q 028508          100 GQASSSSGGIIINISATLHYTA-----------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~-----------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~  156 (208)
                             +.++|++||...+..                       ..+...|+.+|.+.+.+++...++.    |+++..
T Consensus       115 -------~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~----~i~~~i  183 (346)
T d1oc2a_         115 -------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATI  183 (346)
T ss_dssp             -------TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEE
T ss_pred             -------cccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc----CCCEEE
Confidence                   345788877754421                       1234679999999999999887665    599999


Q ss_pred             eecCcccCCCccCCCChHHHHHhhhhh---------hcCCCCCCHHHHHHHHHHhcC
Q 028508          157 IAPGPIKDTAGVSKLAPEEIRSKATDY---------MAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       157 v~pG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~L~s  204 (208)
                      ++|+.+..|..........+.......         ...+.++..+|++++++.++.
T Consensus       184 lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~  240 (346)
T d1oc2a_         184 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT  240 (346)
T ss_dssp             EEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred             EeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh
Confidence            999999987433222111222211111         122235688999999887754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.85  E-value=6.9e-09  Score=79.10  Aligned_cols=160  Identities=16%  Similarity=0.083  Sum_probs=111.3

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|.++........       ..+|.++|.|+.....    .........+++|+.++..+++++...    + 
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~----~-  118 (322)
T d1r6da_          55 PRLRFVHGDIRDAGLLAREL-------RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----G-  118 (322)
T ss_dssp             TTEEEEECCTTCHHHHHHHT-------TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CCeEEEEeccccchhhhccc-------cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHHc----C-
Confidence            35778999999988766543       3799999999864431    233445667889999999999888532    2 


Q ss_pred             CCCCCCCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508          100 GQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                             ..++|++||...+.+           ..+...|+.+|.+.+.+++.++++.    |+++..++|+.+..|...
T Consensus       119 -------~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~  187 (322)
T d1r6da_         119 -------VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQH  187 (322)
T ss_dssp             -------CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCC
T ss_pred             -------CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEECcCCC
Confidence                   356999999876542           2345679999999999999998765    589999999999987543


Q ss_pred             CCCChHHHHHhhhhhhc---------CCCCCCHHHHHHHHHHhcCCC
Q 028508          169 SKLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ....-..+........+         .+.+...+|+|++++.++...
T Consensus       188 ~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~  234 (322)
T d1r6da_         188 PEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG  234 (322)
T ss_dssp             TTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             cCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence            32211222222222211         112467899999999987543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=5.1e-08  Score=74.92  Aligned_cols=123  Identities=14%  Similarity=-0.015  Sum_probs=92.6

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.++++.++...     ++|+|||.|+.....    ...+.......+|+.++..+++++...-     
T Consensus        51 ~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~~-----  116 (347)
T d1z45a2          51 HHIPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQYN-----  116 (347)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHS-----CCCEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             cCCeEEEeecCCHHHHHHHHhcc-----CCCEEEEcccccccc----ccccCcccccccchhhhHHHHHHHHhcc-----
Confidence            45778999999999999988753     799999999965421    1233346678899999999999986432     


Q ss_pred             CCCCCCCCceEEEeccccccc---------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508          100 GQASSSSGGIIINISATLHYT---------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~---------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                             -.++|++||...+.               +..+...|+.+|.+.+.+++.+....  ..++++..++|+.+..
T Consensus       117 -------i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         117 -------VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIG  187 (347)
T ss_dssp             -------CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEEC
T ss_pred             -------cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh--ccCCcEEEEeecceEe
Confidence                   24599999976542               12245679999999999999887664  4578888888887765


Q ss_pred             C
Q 028508          165 T  165 (208)
Q Consensus       165 ~  165 (208)
                      +
T Consensus       188 ~  188 (347)
T d1z45a2         188 A  188 (347)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.76  E-value=2.5e-07  Score=70.44  Aligned_cols=166  Identities=12%  Similarity=0.016  Sum_probs=111.6

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|+++.+++...++..     ++|+|||.|+.....    ...+.....+..|+.++..+..++......... 
T Consensus        57 ~~~~~~~Di~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~-  126 (339)
T d1n7ha_          57 LMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-  126 (339)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-
T ss_pred             ceEEEEccccCHHHHHHHHhhh-----ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhccccccc-
Confidence            4567889999999999988754     899999999864421    123445677889999999998888765544321 


Q ss_pred             CCCCCCCceEEEeccccccc----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCC
Q 028508          101 QASSSSGGIIINISATLHYT----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~  170 (208)
                            ..++++.||.....          +..+...|+.+|.+.+.+++...+..    |+.+..++|+.+..|.....
T Consensus       127 ------~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~  196 (339)
T d1n7ha_         127 ------TVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY----GLFACNGILFNHESPRRGEN  196 (339)
T ss_dssp             ------CCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTT
T ss_pred             ------ceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh----CCCEEEEEEccccCCCCCCC
Confidence                  24456665554322          12356789999999999999887654    59999999999998754332


Q ss_pred             CChHHHHH----hhhhhh---------cCCCCCCHHHHHHHHHHhcCCC
Q 028508          171 LAPEEIRS----KATDYM---------AAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       171 ~~~~~~~~----~~~~~~---------~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      .....+..    ......         ..+.+...+|+++++..++...
T Consensus       197 ~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         197 FVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             SHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            22221111    111111         1112567899999998887654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.69  E-value=1.8e-10  Score=81.71  Aligned_cols=119  Identities=10%  Similarity=0.014  Sum_probs=79.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 028508            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (208)
Q Consensus         1 ~~R~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (208)
                      ++|+.++++++.+++.... ++....+|+++.+++++++       +++|+||||+|..    +...+.++|+..+++|+
T Consensus        53 ~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~-------~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv  120 (191)
T d1luaa1          53 CGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV-------KGAHFVFTAGAIG----LELLPQAAWQNESSIEI  120 (191)
T ss_dssp             EESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT-------TTCSEEEECCCTT----CCCBCHHHHHTCTTCCE
T ss_pred             cccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh-------cCcCeeeecCccc----cccCCHHHHHhhhccee
Confidence            4799999999999997653 4556889999999887764       5899999999964    34578899999999988


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc-CCchhHHHHhHHHHHHHHH
Q 028508           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITR  140 (208)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-~~~~~~y~~sKaa~~~~~~  140 (208)
                      .+.+.....+.+.+...         ......+++.....+ ..+...|+++|+++..|++
T Consensus       121 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         121 VADYNAQPPLGIGGIDA---------TDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             EEECCCSSSCSBTTCCT---------TCEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTS
T ss_pred             ehhHhhHHHHHHHhhhh---------ccCcEEecceEEEeccCcCcHHHHHHHHHHHHHHh
Confidence            77665443322221111         112222222222211 1234569999999887765

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=2.4e-07  Score=70.09  Aligned_cols=138  Identities=11%  Similarity=-0.019  Sum_probs=94.1

Q ss_pred             CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------
Q 028508           47 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------  120 (208)
Q Consensus        47 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------  120 (208)
                      .++|+|||.|+......    ..++....+++|+.++..+++++...             +.++|++||...+.      
T Consensus        64 ~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~~-------------~~k~I~~SS~~vy~~~~~~~  126 (312)
T d2b69a1          64 IEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV-------------GARLLLASTSEVYGDPEVHP  126 (312)
T ss_dssp             CCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH-------------TCEEEEEEEGGGGBSCSSSS
T ss_pred             cCCCEEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHHc-------------CCcEEEEEChheecCCCCCC
Confidence            36999999998654311    11234667889999999999887532             24699999975442      


Q ss_pred             ----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC--hHHHHHhhhhhh----
Q 028508          121 ----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYM----  184 (208)
Q Consensus       121 ----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~----  184 (208)
                                +..+...|+.+|.+.+.+++..+.++    |+++..++|+.|..|.......  -..+.......-    
T Consensus       127 ~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i  202 (312)
T d2b69a1         127 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV  202 (312)
T ss_dssp             BCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEE
T ss_pred             CCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh----CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEE
Confidence                      12356779999999999999988765    5899999999999876543321  112222222111    


Q ss_pred             -----cCCCCCCHHHHHHHHHHhcCC
Q 028508          185 -----AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       185 -----~~~~~~~~~dva~~~~~L~s~  205 (208)
                           +.+.+...+|++++++.++..
T Consensus       203 ~~~g~~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         203 YGSGSQTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             ESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             eCCCCeeEccEEHHHHHHHHHHHHhh
Confidence                 112356789999999888754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.65  E-value=5.3e-07  Score=68.37  Aligned_cols=119  Identities=18%  Similarity=0.122  Sum_probs=83.5

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      .++.++.+|++|.+++.++++..     ++|+|||+|+.....    ...++....+++|+.|+..+++++...-     
T Consensus        49 ~~~~~i~~Di~~~~~l~~~~~~~-----~~d~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~~-----  114 (338)
T d1orra_          49 GNFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQYN-----  114 (338)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             CCcEEEEcccCCHHHHHHHHHhc-----CCceEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhccc-----
Confidence            46788999999999999988755     799999999865421    1233457888999999999998876532     


Q ss_pred             CCCCCCCCceEEEecccccccc----------------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCC
Q 028508          100 GQASSSSGGIIINISATLHYTA----------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~----------------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~g  151 (208)
                             ..+++++||.....+                            ..+...|+.+|...+.+.......+.    
T Consensus       115 -------~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~----  183 (338)
T d1orra_         115 -------SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG----  183 (338)
T ss_dssp             -------TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             -------ccccccccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC----
Confidence                   233555555443322                            12467799999999999998887764    


Q ss_pred             eEEEEeecCccc
Q 028508          152 IRVNGIAPGPIK  163 (208)
Q Consensus       152 i~v~~v~pG~v~  163 (208)
                      +....+.+..+.
T Consensus       184 ~~~~~~~~~~~~  195 (338)
T d1orra_         184 LNTVVFRHSSMY  195 (338)
T ss_dssp             CEEEEEEECCEE
T ss_pred             ccccccccccee
Confidence            444444444343

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.63  E-value=2.7e-07  Score=69.79  Aligned_cols=161  Identities=14%  Similarity=0.034  Sum_probs=106.9

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|++|.+.+...+...     ..++++++++......    ..+.....+..|+.|+..++.++...-.     
T Consensus        50 ~~~~~~~Dl~d~~~~~~~~~~~-----~~~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~~~-----  115 (321)
T d1rpna_          50 DIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQFSP-----  115 (321)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHHCT-----
T ss_pred             CcEEEEccccChHHhhhhhccc-----cccccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHhCC-----
Confidence            5678999999999999888764     6788888877543211    1233567788999999999888765322     


Q ss_pred             CCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            ..++++.|+..-..           +..+...|+.+|.+.+.+++.++.+.    |+++..++|+.+..|....
T Consensus       116 ------~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lr~~~vyGp~~~~  185 (321)
T d1rpna_         116 ------ETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGI  185 (321)
T ss_dssp             ------TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCT
T ss_pred             ------CcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc----CCcEEEEEEecccCCCccc
Confidence                  23466666654321           22356779999999999999988765    4888999999888775332


Q ss_pred             CCChHHH----HHhhhhhh---------cCCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLAPEEI----RSKATDYM---------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~~~~~----~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ......+    ........         ..+.+...+|++++++.++..
T Consensus       186 ~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~  234 (321)
T d1rpna_         186 EFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ  234 (321)
T ss_dssp             TSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS
T ss_pred             cccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhc
Confidence            2211111    11111111         111357889999999998643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.61  E-value=5.5e-07  Score=68.71  Aligned_cols=158  Identities=15%  Similarity=0.034  Sum_probs=105.4

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      ++.++.+|+++.+++.+.+.   +   .+|+|||+|+.....    ...+.....+.+|+.|+..++.++...       
T Consensus        46 ~~~~i~~Di~~~~~~~~~~~---~---~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~-------  108 (342)
T d2blla1          46 HFHFVEGDISIHSEWIEYHV---K---KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------  108 (342)
T ss_dssp             TEEEEECCTTTCSHHHHHHH---H---HCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------
T ss_pred             CeEEEECccCChHHHHHHHH---h---CCCcccccccccccc----ccccCCccccccccccccccccccccc-------
Confidence            46788999998877655332   1   599999999965431    122334567899999999999987532       


Q ss_pred             CCCCCCCceEEEeccccccccC------------------CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508          101 QASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                            +.+++++||...+...                  .+...|+.+|.+.+.+++..+.++    |+++..++|..+
T Consensus       109 ------~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~r~~~~  178 (342)
T d2blla1         109 ------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNW  178 (342)
T ss_dssp             ------TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSE
T ss_pred             ------cccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc----CceeEEeecccc
Confidence                  3456777776543321                  234679999999999999888765    588899999888


Q ss_pred             cCCCccCCCC----h----HHHHHhhhhh---------hcCCCCCCHHHHHHHHHHhcCC
Q 028508          163 KDTAGVSKLA----P----EEIRSKATDY---------MAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       163 ~t~~~~~~~~----~----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ..+.......    .    ..+.......         ...+.+...+|+++++..++..
T Consensus       179 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~  238 (342)
T d2blla1         179 MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  238 (342)
T ss_dssp             ECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred             ccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhh
Confidence            8764333221    1    1111111111         1122367889999999998754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.60  E-value=3e-07  Score=70.81  Aligned_cols=158  Identities=17%  Similarity=0.061  Sum_probs=104.9

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (208)
                      .+..+|+.+.+.+..+++       .+|.|||.|+......   ...+.....+.+|+.++..++.++...    +    
T Consensus        61 ~~~~~D~~~~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~~~~~~~~~~n~~gt~~ll~~~~~~----~----  122 (363)
T d2c5aa1          61 EFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARIN----G----  122 (363)
T ss_dssp             EEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHHT----T----
T ss_pred             cEEEeechhHHHHHHHhh-------cCCeEeeccccccccc---ccccccccccccccchhhHHHHhHHhh----C----
Confidence            456678888877665543       7999999998654321   112345677888999999988887543    2    


Q ss_pred             CCCCCceEEEecccccccc------------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccC
Q 028508          103 SSSSGGIIINISATLHYTA------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (208)
Q Consensus       103 ~~~~~~~iv~iss~~~~~~------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t  164 (208)
                          -.++|++||...+..                  ..+...|+.+|.+.+.+++.+..++    |+++..++|+.+..
T Consensus       123 ----vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyG  194 (363)
T d2c5aa1         123 ----IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYG  194 (363)
T ss_dssp             ----CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEEC
T ss_pred             ----ccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEec
Confidence                246999999875541                  1235679999999999999887665    58999999999987


Q ss_pred             CCccCCCCh-H----HHHHhhhhh---------hcCCCCCCHHHHHHHHHHhcCCC
Q 028508          165 TAGVSKLAP-E----EIRSKATDY---------MAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       165 ~~~~~~~~~-~----~~~~~~~~~---------~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      +........ .    .........         .+.+.+...+|++.++++++...
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~  250 (363)
T d2c5aa1         195 PFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD  250 (363)
T ss_dssp             TTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred             cCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC
Confidence            643322111 1    111111111         12334678899999998887543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.58  E-value=3.5e-07  Score=69.92  Aligned_cols=158  Identities=14%  Similarity=-0.006  Sum_probs=107.8

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|+.|........       ...+.+++.++....    ....++....+++|+.|+..++.++...    +  
T Consensus        71 ~~~~~~~d~~d~~~~~~~~-------~~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~--  133 (341)
T d1sb8a_          71 NFKFIQGDIRNLDDCNNAC-------AGVDYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARDA----K--  133 (341)
T ss_dssp             TEEEEECCTTSHHHHHHHH-------TTCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T--
T ss_pred             CeeEEeecccccccccccc-------ccccccccccccccc----cccccCccchhheeehhHHHHHHHHHhc----C--
Confidence            4677888998888765543       367888888765332    1245667788999999999999887643    2  


Q ss_pred             CCCCCCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccC
Q 028508          101 QASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~  169 (208)
                            -.++|++||...+..           ..+...|+.+|.+.+.+++.++...    ++++..++|+.+.++....
T Consensus       134 ------~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~v~G~~~~~  203 (341)
T d1sb8a_         134 ------VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDP  203 (341)
T ss_dssp             ------CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCC
T ss_pred             ------CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh----CCCeEEEEeceeeccCcCC
Confidence                  346999999875432           2345789999999999999988765    4889999999998775433


Q ss_pred             CCCh----HHHHHhhhhhh---------cCCCCCCHHHHHHHHHHhcCC
Q 028508          170 KLAP----EEIRSKATDYM---------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       170 ~~~~----~~~~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ....    ..+......+-         ..+.+...+|++.++..++..
T Consensus       204 ~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~  252 (341)
T d1sb8a_         204 NGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  252 (341)
T ss_dssp             CSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             CCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhc
Confidence            2211    11222222121         123467789999998877643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=9.1e-07  Score=62.71  Aligned_cols=142  Identities=15%  Similarity=0.126  Sum_probs=86.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|.+++.++++       +.|+||+++|...+....           +++..++..++.+    +.+.+  
T Consensus        47 ~~~~~~gD~~d~~~l~~al~-------~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l~~a----a~~~~--  102 (205)
T d1hdoa_          47 PAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDLSPT-----------TVMSEGARNIVAA----MKAHG--  102 (205)
T ss_dssp             CSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCCSCC-----------CHHHHHHHHHHHH----HHHHT--
T ss_pred             ccccccccccchhhHHHHhc-------CCCEEEEEeccCCchhhh-----------hhhHHHHHHHHHH----HHhcC--
Confidence            47789999999999877765       689999999875432111           1223343444433    44444  


Q ss_pred             CCCCCCCceEEEeccccccccC----CchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCChHHH
Q 028508          101 QASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~~~----~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~  176 (208)
                            -.++|++||.......    +....|...|...+.+.+        ..|++...|+||.+..........    
T Consensus       103 ------v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~--------~~~~~~tiirp~~~~~~~~~~~~~----  164 (205)
T d1hdoa_         103 ------VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYT----  164 (205)
T ss_dssp             ------CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCE----
T ss_pred             ------CCeEEEEeeeeccCCCccccccccccchHHHHHHHHHH--------hcCCceEEEecceecCCCCcccEE----
Confidence                  4679999987654332    223345555655554432        457999999999886432221110    


Q ss_pred             HHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          177 RSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                        ..........+.+.+|+|+.++.++.++
T Consensus       165 --~~~~~~~~~~~i~~~DvA~~~~~~l~~~  192 (205)
T d1hdoa_         165 --VTLDGRGPSRVISKHDLGHFMLRCLTTD  192 (205)
T ss_dssp             --EESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             --EeeCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence              0001112223568899999999988654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.48  E-value=9e-07  Score=68.66  Aligned_cols=124  Identities=17%  Similarity=0.031  Sum_probs=92.0

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+.++.+|++|.+.+.++++..    .++|+|||.|+.....    ...+.....+++|+.++..++.++...    +  
T Consensus        70 ~~~~~~~Di~d~~~l~~~~~~~----~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~~----~--  135 (383)
T d1gy8a_          70 YAALEVGDVRNEDFLNGVFTRH----GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLLH----K--  135 (383)
T ss_dssp             CCEEEESCTTCHHHHHHHHHHS----CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT----T--
T ss_pred             ceEEEECcccCHHHhhhhhhcc----ceeehhhccccccccc----ccccccccccccccccccccchhhhcc----C--
Confidence            4678899999999988888653    5799999999865431    123345667889999999998887642    2  


Q ss_pred             CCCCCCCceEEEeccccccc------------------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcc
Q 028508          101 QASSSSGGIIINISATLHYT------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v  162 (208)
                            ..+++++++.....                  ...+...|+.+|.+.+.+++.+...+    |+++..++|+.+
T Consensus       136 ------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gl~~~~lR~~~v  205 (383)
T d1gy8a_         136 ------CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNA  205 (383)
T ss_dssp             ------CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEE
T ss_pred             ------CcccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh----CCCEEEEeccee
Confidence                  34577766665432                  12346779999999999999887654    599999999999


Q ss_pred             cCCCcc
Q 028508          163 KDTAGV  168 (208)
Q Consensus       163 ~t~~~~  168 (208)
                      ..|...
T Consensus       206 yG~~~~  211 (383)
T d1gy8a_         206 CGAHED  211 (383)
T ss_dssp             ECCCTT
T ss_pred             eccCcc
Confidence            877544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.3e-06  Score=66.68  Aligned_cols=124  Identities=12%  Similarity=-0.016  Sum_probs=91.1

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (208)
                      ..++.++.+|++|.+.+..++..     ..+++++|.|+.....    ...++....+++|+.|+..++.++..    .+
T Consensus        57 ~~~~~~~~~Dl~d~~~l~~~~~~-----~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~  123 (346)
T d1ek6a_          57 GRSVEFEEMDILDQGALQRLFKK-----YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HG  123 (346)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHH-----CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT
T ss_pred             CCCcEEEEeeccccccccccccc-----cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhh----cC
Confidence            45688899999999999887764     3789999999865431    22334567789999999998888643    22


Q ss_pred             CCCCCCCCCceEEEecccccccc------------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCC
Q 028508           99 RGQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (208)
Q Consensus        99 ~~~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~  166 (208)
                              -.+++++||......            ......|+.+|.+.+..++.++..   ..|+....++|+.+.++.
T Consensus       124 --------v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~---~~~~~~~~lR~~~v~G~~  192 (346)
T d1ek6a_         124 --------VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA---DKTWNAVLLRYFNPTGAH  192 (346)
T ss_dssp             --------CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH---CTTCEEEEEEECEEECCC
T ss_pred             --------cccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHh---ccCCceEEEeecceeccC
Confidence                    245888887754431            134556999999999988887654   347888889998887763

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.4e-06  Score=63.03  Aligned_cols=147  Identities=14%  Similarity=0.029  Sum_probs=89.8

Q ss_pred             eEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 028508           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (208)
Q Consensus        23 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (208)
                      ....+|+.+.+++.       +.+...|++||++|...       ..........+|+.++..+++.+..    .+    
T Consensus        62 ~~~~~D~~~~~~~~-------~~~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~~----  119 (232)
T d2bkaa1          62 NQEVVDFEKLDDYA-------SAFQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAKA----GG----  119 (232)
T ss_dssp             EEEECCGGGGGGGG-------GGGSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHHH----TT----
T ss_pred             eeeeeccccccccc-------ccccccccccccccccc-------cccchhhhhhhcccccceeeecccc----cC----
Confidence            34456666555443       33347999999998432       2334556678899998888887643    22    


Q ss_pred             CCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCe-EEEEeecCcccCCCccCCCChHHHHHhhh
Q 028508          103 SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (208)
Q Consensus       103 ~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~  181 (208)
                          -.++|++|+.......  ...|+.+|...+...+.    +    |. ++..++||.+..+...... .........
T Consensus       120 ----v~~fi~~Ss~~~~~~~--~~~Y~~~K~~~E~~l~~----~----~~~~~~IlRP~~i~G~~~~~~~-~~~~~~~~~  184 (232)
T d2bkaa1         120 ----CKHFNLLSSKGADKSS--NFLYLQVKGEVEAKVEE----L----KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFF  184 (232)
T ss_dssp             ----CCEEEEECCTTCCTTC--SSHHHHHHHHHHHHHHT----T----CCSEEEEEECCEEECTTGGGSH-HHHHHHHHH
T ss_pred             ----ccccccCCccccccCc--cchhHHHHHHhhhcccc----c----cccceEEecCceeecCCCcCcH-HHHHHHHHh
Confidence                3569999998765433  45689999877755432    2    33 4777899999876433211 111112222


Q ss_pred             hhhc----CCCCCCHHHHHHHHHHhcCCC
Q 028508          182 DYMA----AYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       182 ~~~~----~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ...+    ..+....+|+|++++.++...
T Consensus       185 ~~~~~~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         185 GSLPDSWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             CSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             hccCCcccCCCeEEHHHHHHHHHHHHhcC
Confidence            2111    223467799999988876443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.27  E-value=3.4e-06  Score=60.45  Aligned_cols=163  Identities=12%  Similarity=-0.028  Sum_probs=95.3

Q ss_pred             CCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC---------CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 028508           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---------AEDLSPNGFRTVIEIDSVGTFIMCHE   89 (208)
Q Consensus        19 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~   89 (208)
                      ..++..+.+|+++.+++.++++       .+|.+||+++......         ........+.....+|+.++..+...
T Consensus        46 ~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (252)
T d2q46a1          46 GGEADVFIGDITDADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA  118 (252)
T ss_dssp             TCCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHH
T ss_pred             cCCcEEEEeeeccccccccccc-------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccc
Confidence            3467788999999999887764       7999999998654211         11112233455667888888877766


Q ss_pred             HHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHH-HHHHHHHHHhcCCCCeEEEEeecCcccCCCcc
Q 028508           90 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD-SITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (208)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~-~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~  168 (208)
                      .....            .+...+.++.....+......+...+.... .....+..    ..|+++..++||.+..+...
T Consensus       119 ~~~~~------------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~  182 (252)
T d2q46a1         119 AKVAG------------VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGG  182 (252)
T ss_dssp             HHHHT------------CSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHH----HSSSCEEEEEECEEECSCTT
T ss_pred             ccccc------------ccccccccccccCCCCcccccccccchhhhhhhhhhhhh----cccccceeecceEEECCCcc
Confidence            54332            456777777766555443333333332222 22222222    34789999999999877432


Q ss_pred             CCCChHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ...........  .......+...+|+|++++.++.++
T Consensus       183 ~~~~~~~~~~~--~~~~~~~~i~~~Dva~a~~~~l~~~  218 (252)
T d2q46a1         183 VRELLVGKDDE--LLQTDTKTVPRADVAEVCIQALLFE  218 (252)
T ss_dssp             SSCEEEESTTG--GGGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             hhhhhhccCcc--cccCCCCeEEHHHHHHHHHHHhCCc
Confidence            21100000000  0111123567899999999887653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.25  E-value=7.4e-06  Score=62.46  Aligned_cols=164  Identities=15%  Similarity=0.093  Sum_probs=106.8

Q ss_pred             CeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 028508           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (208)
Q Consensus        21 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (208)
                      .+..+.+|++|++.+.+++...     .+|+++|.++....    ..+.+.....+++|+.++..+++++...-.     
T Consensus        57 ~i~~~~~Dl~d~~~l~~~~~~~-----~~~~v~~~aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~-----  122 (356)
T d1rkxa_          57 GMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHVGG-----  122 (356)
T ss_dssp             TSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHHCC-----
T ss_pred             CCeEEEeeccChHhhhhhhhhc-----hhhhhhhhhccccc----cccccCCccccccccccchhhhhhhhcccc-----
Confidence            5778899999999999887754     79999999986442    123455677889999999999988764311     


Q ss_pred             CCCCCCCceEEEeccccccc------------cCCchhHHHHhHHHHHHHHHHHHHHhcC-----CCCeEEEEeecCccc
Q 028508          101 QASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGPIK  163 (208)
Q Consensus       101 ~~~~~~~~~iv~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~~~-----~~gi~v~~v~pG~v~  163 (208)
                            ...+++.|+.....            +..+...|+.+|...+.+++..+.++..     ..++.+..+.|+.+.
T Consensus       123 ------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vy  196 (356)
T d1rkxa_         123 ------VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVI  196 (356)
T ss_dssp             ------CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEE
T ss_pred             ------ccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCee
Confidence                  23455555443332            1234566999999999999888876531     236889999999888


Q ss_pred             CCCccCCC-ChHHHHHhhhhhhc--------CCCCCCHHHHHHHHHHhcC
Q 028508          164 DTAGVSKL-APEEIRSKATDYMA--------AYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       164 t~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~L~s  204 (208)
                      .|...... ....+........+        ...+....|++.++..++.
T Consensus       197 Gp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         197 GGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             CTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             CCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhh
Confidence            76532211 11122222222211        1123456789988776653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.79  E-value=0.00013  Score=53.30  Aligned_cols=164  Identities=12%  Similarity=0.107  Sum_probs=98.8

Q ss_pred             HHHHHHHHhcCCCeeEE---EcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 028508            9 RSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (208)
Q Consensus         9 ~~~~~~l~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (208)
                      ..+++.|.+.|-+++.+   .+|++|.+++.++++..     ++|+|||+++.....    .........++.|+.....
T Consensus        15 ~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~   85 (281)
T d1vl0a_          15 REIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK-----KPNVVINCAAHTAVD----KCEEQYDLAYKINAIGPKN   85 (281)
T ss_dssp             HHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHc-----CCCEEEeeccccccc----cccccchhhcccccccccc
Confidence            45677776666444433   34789999988887754     789999998864421    1223345566777777766


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEE
Q 028508           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (208)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v  154 (208)
                      +.......             ...+++.||...+.           +..+...|+.+|...+.+++.    .    +.+.
T Consensus        86 ~~~~~~~~-------------~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~----~----~~~~  144 (281)
T d1vl0a_          86 LAAAAYSV-------------GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA----L----NPKY  144 (281)
T ss_dssp             HHHHHHHH-------------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH----H----CSSE
T ss_pred             cccccccc-------------cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH----h----CCCc
Confidence            66655432             23466666654322           224566688888877766543    2    4567


Q ss_pred             EEeecCcccCCCccCCCChHHHHHhhhhhh-------cCCCCCCHHHHHHHHHHhcCC
Q 028508          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~L~s~  205 (208)
                      ..++|+.++.+...   ....+........       ..+.+...+|+++++.+++..
T Consensus       145 ~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         145 YIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  199 (281)
T ss_dssp             EEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             cccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhh
Confidence            78999999876321   1111221111111       122456889999998887643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.73  E-value=1.3e-05  Score=56.73  Aligned_cols=133  Identities=16%  Similarity=0.088  Sum_probs=79.1

Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCch
Q 028508           46 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ  125 (208)
Q Consensus        46 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~  125 (208)
                      .+.+|.+|+++|.....      ...-....++|+.++..+.+++.    +.+        -.+++++|+..+..  ...
T Consensus        60 ~~~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~----~~~--------v~~~i~~Ss~~~~~--~~~  119 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRAL----EMG--------ARHYLVVSALGADA--KSS  119 (212)
T ss_dssp             CSCCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHH----HTT--------CCEEEEECCTTCCT--TCS
T ss_pred             ccchheeeeeeeeeccc------cccccccccchhhhhhhcccccc----ccc--------cccccccccccccc--ccc
Confidence            35789999999864321      11234567789999888888763    222        35699999976543  334


Q ss_pred             hHHHHhHHHHHHHHHHHHHHhcCCCCe-EEEEeecCcccCCCccCCCChHHHHHhhhhhhcC-CCCCCHHHHHHHHHHhc
Q 028508          126 IHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLA  203 (208)
Q Consensus       126 ~~y~~sKaa~~~~~~~la~e~~~~~gi-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~  203 (208)
                      ..|..+|...+.+.+        ..+. +...++|+.|..+....... ...........+. .++...+|+|++++.++
T Consensus       120 ~~y~~~K~~~E~~l~--------~~~~~~~~I~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~  190 (212)
T d2a35a1         120 IFYNRVKGELEQALQ--------EQGWPQLTIARPSLLFGPREEFRLA-EILAAPIARILPGKYHGIEACDLARALWRLA  190 (212)
T ss_dssp             SHHHHHHHHHHHHHT--------TSCCSEEEEEECCSEESTTSCEEGG-GGTTCCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHhhhcc--------ccccccceeeCCcceeCCcccccHH-HHHHHHHhhccCCCCcEEEHHHHHHHHHHHH
Confidence            568999987765443        2233 57789999998764221100 0000000000000 02356789999999987


Q ss_pred             CCCC
Q 028508          204 SDAV  207 (208)
Q Consensus       204 s~~a  207 (208)
                      .++.
T Consensus       191 ~~~~  194 (212)
T d2a35a1         191 LEEG  194 (212)
T ss_dssp             TCCC
T ss_pred             cCCC
Confidence            6643

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.33  E-value=0.00031  Score=51.47  Aligned_cols=95  Identities=16%  Similarity=0.153  Sum_probs=65.5

Q ss_pred             EEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 028508           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (208)
Q Consensus        25 ~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (208)
                      +.+|++|.+.+.++++..     ++|+|||+||......    ..+.-...++.|+.++..+..++..    .       
T Consensus        36 ~~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-------   95 (298)
T d1n2sa_          36 FCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAANE----T-------   95 (298)
T ss_dssp             SCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHHTT----T-------
T ss_pred             ccCcCCCHHHHHHHHHHc-----CCCEEEEecccccccc----cccCccccccccccccccchhhhhc----c-------
Confidence            357999999999888765     7999999999654321    1222356778899998888877632    1       


Q ss_pred             CCCceEEEecccccccc-----------CCchhHHHHhHHHHHHHHHH
Q 028508          105 SSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRS  141 (208)
Q Consensus       105 ~~~~~iv~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~  141 (208)
                        +.+++++||.....+           ..+...|+.+|.+.+.+.+.
T Consensus        96 --~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_          96 --GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             --TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             --ccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence              456888877754321           22456799999887766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0096  Score=43.24  Aligned_cols=136  Identities=13%  Similarity=0.050  Sum_probs=82.1

Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccc----
Q 028508           46 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----  121 (208)
Q Consensus        46 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----  121 (208)
                      +..+++++|.|+.....   ..   ..+...+.|+.++..+..++...             .-++++.||.....+    
T Consensus        66 ~~~~~~i~~~aa~~~~~---~~---~~~~~~~~~~~~~~~~l~~~~~~-------------~i~~v~~ss~~~~~~~~~~  126 (307)
T d1eq2a_          66 FGDVEAIFHEGACSSTT---EW---DGKYMMDNNYQYSKELLHYCLER-------------EIPFLYASSAATYGGRTSD  126 (307)
T ss_dssp             CSSCCEEEECCSCCCTT---CC---CHHHHHHHTHHHHHHHHHHHHHH-------------TCCEEEEEEGGGGTTCCSC
T ss_pred             ccchhhhhhhccccccc---cc---ccccccccccccccccccccccc-------------ccccccccccccccccccc
Confidence            35678888888754322   11   23445667788888777765533             123666666554332    


Q ss_pred             -------CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC----hHHHHHhhhh--------
Q 028508          122 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATD--------  182 (208)
Q Consensus       122 -------~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~--------  182 (208)
                             ..+...|+.+|.+.+.+++.+..+    .++.+..++|..+..|.......    ...+......        
T Consensus       127 ~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~----~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (307)
T d1eq2a_         127 FIESREYEKPLNVYGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFE  202 (307)
T ss_dssp             BCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC--------
T ss_pred             ccccccccccccccccccchhhhhccccccc----cccccccccceeEeeccccccccccccccccccccccccceeeec
Confidence                   245677999999999999887654    36889999999988775432211    1111111111        


Q ss_pred             --hhcCCCCCCHHHHHHHHHHhcC
Q 028508          183 --YMAAYKFGEKWDIAMAALYLAS  204 (208)
Q Consensus       183 --~~~~~~~~~~~dva~~~~~L~s  204 (208)
                        ....+.+...+|++.++..++.
T Consensus       203 g~~~~~r~~~~v~d~~~~~~~~~~  226 (307)
T d1eq2a_         203 GSENFKRDFVYVGDVADVNLWFLE  226 (307)
T ss_dssp             -----CBCEEEHHHHHHHHHHHHH
T ss_pred             CccceeeeeeecccHHHHHHHHhh
Confidence              1112235677899998887654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.57  E-value=0.028  Score=40.73  Aligned_cols=144  Identities=14%  Similarity=0.041  Sum_probs=75.2

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ..+..+.+|++|.+++.+.+.       ..+.++++++......               |..+...++.++    .+.. 
T Consensus        54 ~~v~~v~~d~~d~~~~~~~~~-------~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~a----~~~~-  106 (312)
T d1qyda_          54 LGAKLIEASLDDHQRLVDALK-------QVDVVISALAGGVLSH---------------HILEQLKLVEAI----KEAG-  106 (312)
T ss_dssp             TTCEEECCCSSCHHHHHHHHT-------TCSEEEECCCCSSSST---------------TTTTHHHHHHHH----HHSC-
T ss_pred             CCcEEEEeecccchhhhhhcc-------Ccchhhhhhhhccccc---------------chhhhhHHHHHH----HHhc-
Confidence            357788999999988877664       6788888887533211               112222223332    2222 


Q ss_pred             CCCCCCCCceEEEeccccccc-----cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC--
Q 028508          100 GQASSSSGGIIINISATLHYT-----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--  172 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~-----~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~--  172 (208)
                             ..++++.||.....     +......|...|.....+.+        ..|+.+..++||.+..+.......  
T Consensus       107 -------~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~r~~~~~g~~~~~~~~~~  171 (312)
T d1qyda_         107 -------NIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIE--------AASIPYTYVSSNMFAGYFAGSLAQLD  171 (312)
T ss_dssp             -------CCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHH--------HTTCCBCEEECCEEHHHHTTTSSCTT
T ss_pred             -------CCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhc--------ccccceEEeccceeecCCccchhhHH
Confidence                   34577777764332     12233445555554433322        336777888888876532111100  


Q ss_pred             -----hHHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCC
Q 028508          173 -----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (208)
Q Consensus       173 -----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  205 (208)
                           .......+........+...+|+|++++.++.+
T Consensus       172 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~  209 (312)
T d1qyda_         172 GHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD  209 (312)
T ss_dssp             CCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred             HHhhhcccccccccccccccceeeHHHHHHHHHHHhcC
Confidence                 000000001111122356889999999888754

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=94.59  E-value=0.073  Score=38.06  Aligned_cols=145  Identities=13%  Similarity=0.024  Sum_probs=73.4

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ..+..+.+|+.+.......++       ..+.+|++++....                   .+...+.+++    .... 
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~-------~~~~vi~~~~~~~~-------------------~~~~~~~~a~----~~~~-  103 (307)
T d1qyca_          55 SGANIVHGSIDDHASLVEAVK-------NVDVVISTVGSLQI-------------------ESQVNIIKAI----KEVG-  103 (307)
T ss_dssp             TTCEEECCCTTCHHHHHHHHH-------TCSEEEECCCGGGS-------------------GGGHHHHHHH----HHHC-
T ss_pred             CCcEEEEeecccchhhhhhhh-------hceeeeeccccccc-------------------chhhHHHHHH----HHhc-
Confidence            346778899999988777665       68888888864321                   1112222222    2222 


Q ss_pred             CCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCCCccCCCC------h
Q 028508          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------P  173 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~~~~~~~~------~  173 (208)
                             ...+++.|+............+...+............    ..|+....++|+.+..+.......      .
T Consensus       104 -------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~  172 (307)
T d1qyca_         104 -------TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPP  172 (307)
T ss_dssp             -------CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTTCSSCC
T ss_pred             -------cccceeeeccccccccccccccccccccccccccchhh----ccCCCceecccceecCCCccchhhhhhhhhh
Confidence                   24477777754433322222222222222222222222    235677888998887543221110      0


Q ss_pred             HHHHHhhhhhhcCCCCCCHHHHHHHHHHhcCCC
Q 028508          174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (208)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  206 (208)
                      ...............+...+|+|++++.++...
T Consensus       173 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  205 (307)
T d1qyca_         173 RDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  205 (307)
T ss_dssp             SSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             cccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence            000000111112223568899999999887643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.85  E-value=1.6e-07  Score=65.93  Aligned_cols=44  Identities=7%  Similarity=0.085  Sum_probs=29.1

Q ss_pred             cCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       121 ~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                      .......|...+++....++..+.++. .+++.++.++||.+.+.
T Consensus       142 ~~~~~~~~~~~~a~~~~~a~~~~~~~~-~~~~g~~~~~~G~l~~a  185 (212)
T d1jaya_         142 NLDEKFDWDVPVCGDDDESKKVVMSLI-SEIDGLRPLDAGPLSNS  185 (212)
T ss_dssp             CTTCCCCEEEEEEESCHHHHHHHHHHH-HHSTTEEEEEEESGGGH
T ss_pred             CcccccCccceEEeCCHHHHHHHHHHH-hhCCCeEEEEeChHHHH
Confidence            333444456666666667777776665 55677888999988753

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=84.82  E-value=3.9  Score=27.22  Aligned_cols=128  Identities=18%  Similarity=0.103  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHhcCCCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 028508            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (208)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (208)
                      ....+.+.+...|..+..+..|-...  ...+.+. ....+.++.||+-.+...... ...  +...    ..+...+.+
T Consensus        39 ~~~~l~~~l~~~g~~~~~~~~~~~~~--~~~l~~~-~~~~~~~~~vv~l~~~~~~~~-~~~--~~~~----~~~~~~l~l  108 (209)
T d2fr1a2          39 TSTAAREALESAGARVRELVVDARCG--RDELAER-LRSVGEVAGVLSLLAVDEAEP-EEA--PLAL----ASLADTLSL  108 (209)
T ss_dssp             HHHHHHHHHHTTSCEEEEEECCTTCC--HHHHHHH-HTTSCCCSEEEECTTTTCCCC-SSC--GGGC----HHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCeEEEecCCCccC--HHHHHHH-hhccCCCCeEEEeCCCCCCCC-cch--hHHH----HHHHHHHHH
Confidence            34566677777777776666654422  2233333 334578899998776533211 111  1111    124455566


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEeccccccccCCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEe
Q 028508           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  157 (208)
                      +|.+..    ...       ..++.+++...... ......-....+++-+|+++++.|+. .-.++...+
T Consensus       109 ~qal~~----~~~-------~~~l~~vT~~a~~~-~~~d~~~~p~~A~l~Gl~r~~~~E~P-~l~~~~vDl  166 (209)
T d2fr1a2         109 VQAMVS----AEL-------GCPLWTVTESAVAT-GPFERVRNAAHGALWGVGRVIALENP-AVWGGLVDV  166 (209)
T ss_dssp             HHHHHH----TTC-------CCCEEEEEESCSCS-STTSCCSCGGGHHHHHHHHHHHHHCG-GGEEEEEEE
T ss_pred             HHHHHh----CCC-------CCcEEEEEcCCccc-CCCcccCCHhHHhHHHHHHHHHHhCC-CceEEEEEC
Confidence            666532    211       34466665543221 11122224678899999999999986 433444444

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=82.32  E-value=6.9  Score=28.11  Aligned_cols=104  Identities=12%  Similarity=0.071  Sum_probs=56.1

Q ss_pred             CCeeEEEcCCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 028508           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (208)
Q Consensus        20 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (208)
                      ..+..+++|+.|..++..      ..+...|.++.+......      .          ++.....++.++    ...+ 
T Consensus        49 ~~v~~~~gD~~d~~~~~~------~a~~~~~~~~~~~~~~~~------~----------~~~~~~~~~~aa----~~ag-  101 (350)
T d1xgka_          49 PNVTLFQGPLLNNVPLMD------TLFEGAHLAFINTTSQAG------D----------EIAIGKDLADAA----KRAG-  101 (350)
T ss_dssp             TTEEEEESCCTTCHHHHH------HHHTTCSEEEECCCSTTS------C----------HHHHHHHHHHHH----HHHS-
T ss_pred             CCCEEEEeeCCCcHHHHH------HHhcCCceEEeecccccc------h----------hhhhhhHHHHHH----HHhC-
Confidence            357889999998765322      123478887776542111      1          122223333333    2222 


Q ss_pred             CCCCCCCCceEEEecccccccc--CCchhHHHHhHHHHHHHHHHHHHHhcCCCCeEEEEeecCcccCC
Q 028508          100 GQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (208)
Q Consensus       100 ~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~pG~v~t~  165 (208)
                             -.+++..||......  ......|..+|.....+.+        ..++....++||.+..+
T Consensus       102 -------v~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~--------~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_         102 -------TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR--------QLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             -------CCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHH--------TSSSCEEEEEECEEGGG
T ss_pred             -------CCceEEEeeccccccCCcccchhhhhhHHHHHHHHH--------hhccCceeeeeceeecc
Confidence                   245778887654432  2233445566765554433        33567778888877644