BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028511
(208 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1U6M|A Chain A, The Crystal Structure Of Acetyltransferase
pdb|1U6M|B Chain B, The Crystal Structure Of Acetyltransferase
pdb|1U6M|C Chain C, The Crystal Structure Of Acetyltransferase
pdb|1U6M|D Chain D, The Crystal Structure Of Acetyltransferase
Length = 199
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 86 HRGYVAGILTVDTVADFLPRKGPLRQ--RRTGIA----------------YISNVAVREK 127
H G VAGI D PLR+ ++ G+A Y+ ++V E+
Sbjct: 64 HAGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDER 123
Query: 128 FRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCV 176
FR GI +L+ A+ G +++ L+ DF+N GA KLY +GFK V
Sbjct: 124 FRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDV 172
>pdb|3PP9|A Chain A, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|B Chain B, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
pdb|3PP9|C Chain C, 1.6 Angstrom Resolution Crystal Structure Of Putative
Streptothricin Acetyltransferase From Bacillus Anthracis
Str. Ames In Complex With Acetyl Coenzyme A
Length = 187
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 109 LRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLY 168
L++ AYI ++ V +K+R G+ KRLIA+A+ A+ I L NN+ A K Y
Sbjct: 93 LKKNWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNXPGIXLETQNNNVAACKFY 152
Query: 169 KGQGF 173
+ GF
Sbjct: 153 EKCGF 157
>pdb|2X7B|A Chain A, Crystal Structure Of The N-Terminal Acetylase Ard1 From
Sulfolobus Solfataricus P2
Length = 168
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 118 YISNVAVREKFRRKGIAKRLI-AKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCV 176
++ ++AV E++RRKGIA L+ A ++ + I L +N A LY+ FK V
Sbjct: 89 HVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKV 148
Query: 177 KVPEG 181
KV +G
Sbjct: 149 KVLKG 153
>pdb|1UFH|A Chain A, Structure Of Putative Acetyltransferase, Yycn Protein Of
Bacillus Subtilis
pdb|1UFH|B Chain B, Structure Of Putative Acetyltransferase, Yycn Protein Of
Bacillus Subtilis
Length = 180
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCV 176
A+I + + E +R KG AK+ +A + AR G R ++LH +N A KLY+ GF+
Sbjct: 113 AFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQET 172
Query: 177 KV 178
V
Sbjct: 173 DV 174
>pdb|1ON0|A Chain A, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|B Chain B, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|C Chain C, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
pdb|1ON0|D Chain D, Crystal Structure Of Putative Acetyltransferase (yycn)
From Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr144
Length = 158
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCV 176
A+I + + E +R KG AK+ +A + AR G R ++LH +N A KLY+ GF+
Sbjct: 89 AFIYDFGLYEPYRGKGYAKQALAALDQAARSXGIRKLSLHVFAHNQTARKLYEQTGFQET 148
Query: 177 KV 178
V
Sbjct: 149 DV 150
>pdb|3T9Y|A Chain A, Crystal Structure Of Gnat Family Acetyltransferase
Staphylococcus Aureus Subsp. Aureus Usa300_tch1516
Length = 150
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 123 AVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNN--LGATKLYKGQGF 173
+ +FR+KG KRL+A +E ++ C++I L+ N L A KLY G+
Sbjct: 87 VIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGY 139
>pdb|3JVN|A Chain A, Crystal Structure Of The Acetyltransferase Vf_1542 From
Vibrio Fischeri, Northeast Structural Genomics
Consortium Target Vfr136
Length = 166
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHC-DFNNLGATKLYKGQGF 173
A I + + +++RR+G+A++L + E + + +G + I + DFN GA + Y QG
Sbjct: 89 ATIDELYIEKEYRREGVAEQLXXRIEQELKDYGVKEIFVEVWDFNK-GALEFYNKQGL 145
>pdb|1VKC|A Chain A, Putative Acetyl Transferase From Pyrococcus Furiosus
pdb|1VKC|B Chain B, Putative Acetyl Transferase From Pyrococcus Furiosus
Length = 158
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 88 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG 147
G+V +T+DTV D++ IAYI ++ V + R GI L+ KAE A+
Sbjct: 75 GHVWICITLDTV-DYVK-----------IAYIYDIEVVKWARGLGIGSALLRKAEEWAKE 122
Query: 148 WGCRSIALHCDFNNLGATKLYKGQGFKC 175
G + I L + +N A K Y+ +G+K
Sbjct: 123 RGAKKIVLRVEIDN-PAVKWYEERGYKA 149
>pdb|1I1D|A Chain A, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|B Chain B, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|C Chain C, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
pdb|1I1D|D Chain D, Crystal Structure Of Yeast Gna1 Bound To Coa And Glnac-6p
Length = 161
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGF 173
+I ++AV K++ +G+ K LI + +GC I L CD N+ K Y+ GF
Sbjct: 97 GHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNV---KFYEKCGF 150
>pdb|1S3Z|A Chain A, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And Ribostamycin
pdb|1S3Z|B Chain B, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And Ribostamycin
pdb|1S5K|A Chain A, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And N-Terminal His(6)-Tag (Crystal Form 1)
pdb|1S5K|B Chain B, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And N-Terminal His(6)-Tag (Crystal Form 1)
pdb|1S60|A Chain A, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And N-Terminal His(6)-Tag (Crystal Form 2)
pdb|2VBQ|A Chain A, Structure Of Aac(6')-Iy In Complex With Bisubstrate Analog
Coa-S-Monomethyl-Acetylneamine.
pdb|2VBQ|B Chain B, Structure Of Aac(6')-Iy In Complex With Bisubstrate Analog
Coa-S-Monomethyl-Acetylneamine
Length = 165
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 116 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFK 174
+ ++ + V FR++G+AK+LIA + GCR +A N + K+++ GF+
Sbjct: 95 VVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFE 153
>pdb|1I12|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
pdb|1I12|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Gna1
Complexed With Accoa
Length = 160
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGF 173
+I ++AV K++ +G+ K LI + +GC I L CD N+ K Y+ GF
Sbjct: 96 GHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNV---KFYEKCGF 149
>pdb|1I21|A Chain A, Crystal Structure Of Yeast Gna1
pdb|1I21|B Chain B, Crystal Structure Of Yeast Gna1
pdb|1I21|M Chain M, Crystal Structure Of Yeast Gna1
pdb|1I21|N Chain N, Crystal Structure Of Yeast Gna1
pdb|1I21|X Chain X, Crystal Structure Of Yeast Gna1
pdb|1I21|Y Chain Y, Crystal Structure Of Yeast Gna1
Length = 159
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGF 173
+I ++AV K++ +G+ K LI + +GC I L CD N+ K Y+ GF
Sbjct: 95 GHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNV---KFYEKCGF 148
>pdb|1Y9K|A Chain A, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
pdb|1Y9K|B Chain B, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
pdb|1Y9K|C Chain C, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
pdb|1Y9K|D Chain D, Iaa Acetyltransferase From Bacillus Cereus Atcc 14579
Length = 157
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 109 LRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLY 168
L + R I N+AV E + KGI K+L+ A A+G+G + + +++ LY
Sbjct: 54 LLETRPKTXEIXNIAVAEHLQGKGIGKKLLRHAVETAKGYGXSKLEVGTGNSSVSQLALY 113
Query: 169 KGQGFKCVKV 178
+ GF+ +
Sbjct: 114 QKCGFRIFSI 123
>pdb|1YVK|A Chain A, Crystal Structure Of The Bacillis Subtilis
Acetyltransferase In Complex With Coa, Northeast
Structural Genomics Target Sr237.
pdb|1YVK|B Chain B, Crystal Structure Of The Bacillis Subtilis
Acetyltransferase In Complex With Coa, Northeast
Structural Genomics Target Sr237.
pdb|1YVK|C Chain C, Crystal Structure Of The Bacillis Subtilis
Acetyltransferase In Complex With Coa, Northeast
Structural Genomics Target Sr237.
pdb|1YVK|D Chain D, Crystal Structure Of The Bacillis Subtilis
Acetyltransferase In Complex With Coa, Northeast
Structural Genomics Target Sr237
Length = 163
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 109 LRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLY 168
L + R I N+AV+E ++KG K+L+ A +A+ G +I + +++ LY
Sbjct: 56 LLKTRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLY 115
Query: 169 KGQGFK 174
+ GF+
Sbjct: 116 QKCGFR 121
>pdb|1BO4|A Chain A, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
pdb|1BO4|B Chain B, Crystal Structure Of A Gcn5-Related N-Acetyltransferase:
Serratia Marescens Aminoglycoside 3-N-Acetyltransferase
Length = 168
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 118 YISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFK 174
YI ++AV + RR+GIA LI + +A G I + D+ + A LY G +
Sbjct: 107 YIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIR 163
>pdb|2G3A|A Chain A, Crystal Structure Of Putative Acetyltransferase From
Agrobacterium Tumefaciens
Length = 152
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 115 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFK 174
G Y+ + V E R +GIA +L+A AE +AR GC + D N A + Y+ GF
Sbjct: 74 GWLYVQLLFVPEAXRGQGIAPKLLAXAEEEARKRGC--XGAYIDTXNPDALRTYERYGFT 131
Query: 175 CV 176
+
Sbjct: 132 KI 133
>pdb|4E8O|A Chain A, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ih From Acinetobacter
Baumannii
pdb|4E8O|B Chain B, Crystal Structure Of Aminoglycoside Antibiotic
6'-N-Acetyltransferase Aac(6')-Ih From Acinetobacter
Baumannii
Length = 167
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 116 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFK 174
+A++ + V ++RR GIA L+ + E A+ + C A +N + +++ GF
Sbjct: 96 VAFLEGIFVLPEYRRSGIATGLVQQVEIWAKQFACTEFASDAALDNQISHAMHQALGFH 154
>pdb|1Z4E|A Chain A, Crystal Structure Of Transcriptional Regulator From
Bacillus Halodurans C-125
pdb|1Z4E|B Chain B, Crystal Structure Of Transcriptional Regulator From
Bacillus Halodurans C-125
Length = 153
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 90 VAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 149
+ G+L V T +L +G R A I V R +GI +L+ A +A+ G
Sbjct: 66 IVGMLQV-TFTPYLTYQGSWR------ATIEGVRTHSAARGQGIGSQLVCWAIERAKERG 118
Query: 150 CRSIALHCDFNNLGATKLYKGQGFK 174
C I L D A + Y+ GFK
Sbjct: 119 CHLIQLTTDKQRPDALRFYEQLGFK 143
>pdb|3EC4|A Chain A, Crystal Structure Of Putative Acetyltransferase From The
Gnat Family (yp_497011.1) From Novosphingobium
Aromaticivorans Dsm 12444 At 1.80 A Resolution
pdb|3EC4|B Chain B, Crystal Structure Of Putative Acetyltransferase From The
Gnat Family (yp_497011.1) From Novosphingobium
Aromaticivorans Dsm 12444 At 1.80 A Resolution
Length = 228
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 116 IAYISNVAVREKFRRKGIAKRLIAK--AEAQARGWGCRSIALHCDFNNLGATKLYKGQGF 173
+A +S V ++R +G+A RLI K A ARG LH +N A +LY+ GF
Sbjct: 157 LAEVSGVCTWPEYRGRGLAARLIRKVIAGXAARG---EVPYLHSYASNASAIRLYESLGF 213
Query: 174 KC 175
+
Sbjct: 214 RA 215
>pdb|2CNM|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNM|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With A Bisubstrate Inhibitor (Cterm-Arg-Arg-Phe-
Tyr-Arg-Ala-N-Alpha-Acetyl-S-Coa).
pdb|2CNS|A Chain A, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|B Chain B, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNS|C Chain C, Rimi - Ribosomal S18 N-alpha-protein Acetyltransferase In
Complex With Acetylcoa.
pdb|2CNT|A Chain A, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|B Chain B, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|C Chain C, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea.
pdb|2CNT|D Chain D, Rimi - Ribosomal S18 N-Alpha-Protein Acetyltransferase In
Complex With Coenzymea
Length = 160
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCV 176
A + N+AV F+R+G+ + L+ + G ++ L +N A LY+ GF
Sbjct: 64 ATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEA 123
Query: 177 KV 178
+
Sbjct: 124 TI 125
>pdb|3T90|A Chain A, Crystal Structure Of Glucosamine-6-Phosphate
N-Acetyltransferase From Arabidopsis Thaliana
Length = 149
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 117 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNN 161
+I +V V +FR K + K+++ + GC + L C N
Sbjct: 84 GHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVEN 128
>pdb|2BEI|A Chain A, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2BEI|B Chain B, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2Q4V|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
pdb|2Q4V|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
Length = 170
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 118 YISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 177
Y+ ++ V ++R +GI ++I K A GC L N A LYK G + +
Sbjct: 90 YLEDIYVXPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAXDLYKALGAQDLT 149
Query: 178 VPEG 181
EG
Sbjct: 150 EAEG 153
>pdb|3LD2|A Chain A, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|B Chain B, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|C Chain C, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
pdb|3LD2|D Chain D, The Crystal Structure Of Smu.2055 From Streptococcus
Mutans Ua159
Length = 197
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 122 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGF 173
+AV EK RRKGI + L+ + + + + +H +N A YK GF
Sbjct: 115 IAVAEKERRKGIGRALVQIFLNEVKS-DYQKVLIHVLSSNQEAVLFYKKLGF 165
>pdb|4FD5|A Chain A, Crystal Structure Of Arylalkylamine N-Acetyltransferase 2
From Aedes Aegypti
pdb|4FD6|A Chain A, Crystal Structure Of Native Arylalkylamine
N-Acetyltransferase 2 From The Yellow Fever Mosquito,
Aedes Aegypti
Length = 222
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 122 VAVREKFRRKGIAKRLIAKAEAQARGWG 149
++V +FR KG+AK+LI K+E A G
Sbjct: 136 LSVDSRFRGKGLAKKLIEKSEELALDRG 163
>pdb|2PDO|A Chain A, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|B Chain B, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|C Chain C, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|D Chain D, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|E Chain E, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|F Chain F, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|G Chain G, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
pdb|2PDO|H Chain H, Crystal Structure Of The Putative Acetyltransferase Of
Gnat Family From Shigella Flexneri
Length = 144
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 115 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFK 174
G AY + V +FR +GIA L+ + E + GC I ++ +N Y+ G++
Sbjct: 70 GSAYY--LGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDXVLGXYERLGYE 127
Query: 175 CVKV 178
V
Sbjct: 128 HADV 131
>pdb|1YX0|A Chain A, Solution Structure Of Bacillus Subtilis Protein Ysne: The
Northeast Structural Genomics Consortium Target Sr220
Length = 159
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 100 ADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAK--AEAQARGWGCRSIALHC 157
D L G L++ T I ++ RKG+AK+++ EA+ RG+ S+
Sbjct: 54 GDELAGCGALKELDTRHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGS 113
Query: 158 DFNNLGATKLYKGQGFK 174
+ A KLY+ GF+
Sbjct: 114 MASFEPARKLYESFGFQ 130
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,781,767
Number of Sequences: 62578
Number of extensions: 228733
Number of successful extensions: 446
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 422
Number of HSP's gapped (non-prelim): 28
length of query: 208
length of database: 14,973,337
effective HSP length: 94
effective length of query: 114
effective length of database: 9,091,005
effective search space: 1036374570
effective search space used: 1036374570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)