BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028513
(208 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 15/134 (11%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS-- 141
+A L D+D DG + EL A +IR PT+EE++ M+SEVD +G+G I + +S
Sbjct: 14 EAFGLFDKDGDGCITVEEL-ATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 142 -----------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKN 190
LKE F FD D +G I+A EL V LG++L T ++ MI D +
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL-TDEEVEQMIKEADLD 131
Query: 191 GDGFVCFEDFSRMM 204
GDG V +E+F +MM
Sbjct: 132 GDGQVNYEEFVKMM 145
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 58 SVLHEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQE 117
+V+ + + W ++ + E +A L D+D DG + EL ++ LG + PT+
Sbjct: 280 AVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEA 338
Query: 118 EVKSMLSEVDREGDGYIPL-EALI------------SRLKETFDFFDADHDGKITAEELF 164
E++ M++EVD +GDG I E LI ++E F FD D +G I+A EL
Sbjct: 339 ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 398
Query: 165 GVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
V T LG++L T ++ MI D +GDG V +E+F +MM
Sbjct: 399 HVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
S L E F FD D +G I+A EL V T LG++L T D+ MI
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDDEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG + +E+F RMM
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL++A K+ DRD +G++ +EL ++ LG + T +EV M+ E D +GDG+I
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINY 138
Query: 137 EALI 140
E +
Sbjct: 139 EEFV 142
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F +M
Sbjct: 65 FPEFLSLM 72
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
S L E F FD D +G I+A EL V T LG++L T D+ MI
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDDEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG + +E+F RMM
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL++A K+ DRD +G++ +EL ++ LG + T +EV M+ E D +GDG+I
Sbjct: 80 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINY 138
Query: 137 EALI 140
E +
Sbjct: 139 EEFV 142
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F +M
Sbjct: 65 FPEFLSLM 72
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 369
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 428
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +GDG +
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGDGTID 364
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 365 FPEFLTMM 372
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 369
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 428
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +GDG +
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGDGTID 364
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 365 FPEFLTMM 372
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 370
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +GDG +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGDGTID 365
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 366 FPEFLTMM 373
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 369
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 370 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 428
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +GDG +
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGDGTID 364
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 365 FPEFLTMM 372
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +GDG +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 371
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 372 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 430
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 431 DIDGDGQVNYEEFVQMM 447
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 366
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 367 FPEFLTMM 374
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 365
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 366 FPEFLTMM 373
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 365
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 366 FPEFLTMM 373
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 365
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 366 FPEFLTMM 373
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 333
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 334 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 392
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 393 DIDGDGQVNYEEFVQMM 409
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 328
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 329 FPEFLTMM 336
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 370
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 365
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 366 FPEFLTMM 373
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 395
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 396 DIDGDGQVNYEEFVQMM 412
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 331
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 332 FPEFLTMM 339
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 395
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 396 DIDGDGQVNYEEFVQMM 412
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 331
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 332 FPEFLTMM 339
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDQMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 72 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 130
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 131 DIDGDGQVNYEEFVQMM 147
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 66
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 67 FPEFLTMM 74
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 73
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 74 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 132
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 133 DIDGDGQVNYEEFVQMM 149
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 10 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 68
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 69 FPEFLTMM 76
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 66 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 124
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 125 DIDGDGQVNYEEFVQMM 141
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 60
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 61 FPEFLTMM 68
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 126
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 127 DIDGDGQVNYEEFVQMM 143
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 62
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 63 FPEFLTMM 70
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 126
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 127 DIDGDGQVNYEEFVQMM 143
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 62
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 63 FPEFLTMM 70
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 126
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 127 DIDGDGQVNYEEFVQMM 143
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 62
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 63 FPEFLTMM 70
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ +LKE F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F ++M
Sbjct: 129 DVDGDGQVNYEEFVQVM 145
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 200 FSRMM 204
F +M
Sbjct: 68 FLNLM 72
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 70 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDRE 129
M+ ++ D E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDAD 59
Query: 130 GDGYIPLEALIS-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCT 176
G+G I ++ LKE F FD D +G I+A EL V T LG++L T
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-T 118
Query: 177 LDDCRGMIALVDKNGDGFVCFEDFSRMM 204
++ MI D +GDG + +E+F ++M
Sbjct: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 69 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 127
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 128 DIDGDGQVNYEEFVQMM 144
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 63
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 64 FPEFLTMM 71
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 67 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 125
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 126 DIDGDGQVNYEEFVQMM 142
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 61
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 62 FPEFLTMM 69
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 76 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 134
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 135 DIDGDGQVNYEEFVQMM 151
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 70
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 71 FPEFLTMM 78
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M+SE+DR+G+G + +
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNP-TEAELRDMMSEIDRDGNGTVDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
++E F FD D +G ++A EL V T+LG++L ++ MI
Sbjct: 70 GMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSD-EEVDEMIRAA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F R++
Sbjct: 129 DTDGDGQVNYEEFVRVL 145
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E ++ KE F FD D DG IT EL V LG + T + R M++ +D++G+G V
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLG-QNPTEAELRDMMSEIDRDGNGTVD 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLGMM 72
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 48 SAPDRVGTPTSVLHEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLI 107
S DR G T E G + D D E+ +A ++ D+D +G V +EL ++
Sbjct: 53 SEIDRDGNGTVDFPEFLGMMARKMKDT--DNEEEIREAFRVFDKDGNGFVSAAELRHVMT 110
Query: 108 RLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRL 143
RLG + + EEV M+ D +GDG + E + L
Sbjct: 111 RLG-EKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG+ L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL-TDEEVDEMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 130 DIDGDGQVNYEEFVQMM 146
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG+ L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F +MM
Sbjct: 129 DIDGDGQVNYEEFVQMM 145
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ LKE F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F ++M
Sbjct: 129 DVDGDGQVNYEEFVQVM 145
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 200 FSRMM 204
F +M
Sbjct: 68 FLNLM 72
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 65
Query: 141 S------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVD 188
+ ++E F FD D +G I+A EL V T LG++L T ++ MI +
Sbjct: 66 TMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREAN 124
Query: 189 KNGDGFVCFEDFSRMM 204
+GDG V +E+F +MM
Sbjct: 125 IDGDGQVNYEEFVQMM 140
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 60
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 61 FPEFLTMM 68
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-----------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDK 189
+ ++E F FD D +G I+A EL V T LG++L T ++ MI D
Sbjct: 70 TMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADI 128
Query: 190 NGDGFVCFEDFSRMM 204
+GDG V +E+F MM
Sbjct: 129 DGDGQVNYEEFVTMM 143
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 66
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ LKE F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 125
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F ++M
Sbjct: 126 DVDGDGQVNYEEFVQVM 142
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 200 FSRMM 204
F +M
Sbjct: 65 FLNLM 69
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 70 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDRE 129
M+ ++ D E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNP-TEAELQDMINEVDAD 59
Query: 130 GDGYIPLEALIS-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCT 176
G+G I ++ LKE F FD D +G I+A EL V T LG++L T
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-T 118
Query: 177 LDDCRGMIALVDKNGDGFVCFEDFSRMM 204
++ MI D +GDG + +++F ++M
Sbjct: 119 DEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
+ +GDG V +E+F +MM
Sbjct: 129 NIDGDGQVNYEEFVQMM 145
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F MM
Sbjct: 129 DIDGDGQVNYEEFVTMM 145
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIREA 128
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F MM
Sbjct: 129 DIDGDGQVNYEEFVTMM 145
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ MI
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL-TDEEVDEMIRES 129
Query: 188 DKNGDGFVCFEDFSRMM 204
D +GDG V +E+F MM
Sbjct: 130 DIDGDGQVNYEEFVTMM 146
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + +L ++ LG +P T+ E++ M++EV +G+G I +
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNP-TEAELQDMINEVGADGNGTIDFPQFL 370
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F F D +G I+A +L V T LG++L T ++ MI
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKL-TDEEVDEMIREA 429
Query: 188 DKNGDGFVCFEDFSRMM 204
+GDG V +E F +MM
Sbjct: 430 GIDGDGQVNYEQFVQMM 446
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT ++L V LG T + + MI V +G+G +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQN-PTEAELQDMINEVGADGNGTID 365
Query: 197 FEDFSRMM 204
F F MM
Sbjct: 366 FPQFLTMM 373
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
++ + E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D++G G
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK-KEEIKKMISEIDKDGSGT 80
Query: 134 IPLEALISRLK-------------ETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC 180
I E ++ + + F FD D+ G IT ++L V +LG+ L T ++
Sbjct: 81 IDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENL-TEEEL 139
Query: 181 RGMIALVDKNGDGFVCFEDFSRMM 204
+ MIA D+N D + ++F R+M
Sbjct: 140 QEMIAEADRNDDNEIDEDEFIRIM 163
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A +L D DN G + +L + LG + T+EE++ M++E DR D I
Sbjct: 98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNEIDE 156
Query: 137 EALISRLKET 146
+ I +K+T
Sbjct: 157 DEFIRIMKKT 166
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL + LG +P T+ E++ ++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNP-TEAELQDXINEVDADGNGTIDFPEFL 70
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ I
Sbjct: 71 TXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL-TDEEVDQXIREA 129
Query: 188 DKNGDGFVCFEDF 200
D +GDG V +E+F
Sbjct: 130 DIDGDGQVNYEEF 142
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + I VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDADGNGTID 65
Query: 197 FEDF 200
F +F
Sbjct: 66 FPEF 69
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL + LG + T EEV + E D +GDG +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDQXIREADIDGDGQVNY 139
Query: 137 EALIS 141
E +
Sbjct: 140 EEFVQ 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL + LG +P T+ E++ ++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNP-TEAELQDXINEVDADGNGTIDFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ I
Sbjct: 70 TXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL-TDEEVDEXIREA 128
Query: 188 DKNGDGFVCFEDF 200
D +GDG V +E+F
Sbjct: 129 DIDGDGQVNYEEF 141
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + I VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG-QNPTEAELQDXINEVDADGNGTID 64
Query: 197 FEDF 200
F +F
Sbjct: 65 FPEF 68
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL + LG + T EEV + E D +GDG +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDEXIREADIDGDGQVNY 138
Query: 137 EALIS 141
E +
Sbjct: 139 EEFVQ 143
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP- 135
+ E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D+EG G +
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK-KEEIKKMISEIDKEGTGKMNF 61
Query: 136 ---LEALISRLKE---------TFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 183
L + ++ E F FD D GKI+ + L V +LG+ L T ++ + M
Sbjct: 62 GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEM 120
Query: 184 IALVDKNGDGFVCFEDFSRMM 204
I D++GDG V ++F R+M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A KL D D G + L+ + LG + T EE++ M+ E DR+GDG +
Sbjct: 76 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEMIDEADRDGDGEVSE 134
Query: 137 EALISRLK 144
+ + +K
Sbjct: 135 QEFLRIMK 142
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL + LG + PT+ E++ ++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCN-PTEAELQDXINEVDADGNGTINFPEFL 69
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
+ ++E F FD D +G I+A EL V T LG++L T ++ I
Sbjct: 70 TXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKL-TDEEVDEXIREA 128
Query: 188 DKNGDGFVCFEDF 200
D +GDG V +E+F
Sbjct: 129 DIDGDGQVNYEEF 141
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELC--TLDDCRGMIALVDKNGDGF 194
E I+ KE F FD D DG IT +EL V LG C T + + I VD +G+G
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLG---CNPTEAELQDXINEVDADGNGT 62
Query: 195 VCFEDF 200
+ F +F
Sbjct: 63 INFPEF 68
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL + LG + T EEV + E D +GDG +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-EKLTDEEVDEXIREADIDGDGQVNY 138
Query: 137 EALIS 141
E +
Sbjct: 139 EEFVQ 143
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG PT+EE+ +++ EVD +G G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQ-TPTKEELDAIIEEVDEDGSGT 69
Query: 134 IPLEALI----------------SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 177
I E + L E F FD + DG I AEEL +F G E T
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASG-EHVTD 128
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
++ ++ DKN DG + F++F +MME
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG PT+EE+ +++ EVD +G G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQ-TPTKEELDAIIEEVDEDGSGT 69
Query: 134 IPLEALI----------------SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 177
I E + L E F FD + DG I AEEL +F G E T
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASG-EHVTD 128
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
++ ++ DKN DG + F++F +MME
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
++ + E+ +A L D D G + EL+ + LG +P +EE+K M++++D++G G
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK-KEEIKKMIADIDKDGSGT 60
Query: 134 IPLEALIS-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC 180
I E + + + F FD D GKI+ + L V +LG+ + T ++
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENM-TDEEL 119
Query: 181 RGMIALVDKNGDGFVCFEDFSRMM 204
+ MI D++GDG V E+F R+M
Sbjct: 120 QEMIDEADRDGDGEVNEEEFFRIM 143
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A +L D D G + L+ + LG + T EE++ M+ E DR+GDG +
Sbjct: 78 DSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQEMIDEADRDGDGEVNE 136
Query: 137 EALISRLKET 146
E +K+T
Sbjct: 137 EEFFRIMKKT 146
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL-EALLI------RLGADPPTQEEVKSMLSEVD 127
+L+ EL K LD++ DG + + EL E + LG +EEV ++L EVD
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 128 REGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELC 175
+ +GYI IS RL+ F+ FD D GKIT EEL +F
Sbjct: 410 FDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEK 469
Query: 176 TLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
T +D G D+N D + F++F MM
Sbjct: 470 TWNDVLGE---ADQNKDNMIDFDEFVSMM 495
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 20/149 (13%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 60
Query: 131 DGYIPLE---ALISR----------LKETFDFFDADHDGKITAEELFGVFTKLGDEL--C 175
+ I AL+SR L E F FD + DG I+A EL V T +G++L
Sbjct: 61 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 176 TLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+DD ++ +G G + + F+ ++
Sbjct: 121 EVDDMLREVS----DGSGEINIQQFAALL 145
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D++G I++ EL V LG + ++ +D +G+ +
Sbjct: 7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA-EVNDLMNEIDVDGNHQIE 65
Query: 197 FEDFSRMMELQ 207
F +F +M Q
Sbjct: 66 FSEFLALMSRQ 76
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLEALI----------------SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTL 177
I E + L++ F FD + DG I EEL + G E T
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 20/149 (13%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 59
Query: 131 DGYIPLE---ALISR----------LKETFDFFDADHDGKITAEELFGVFTKLGDEL--C 175
+ I AL+SR L E F FD + DG I+A EL V T +G++L
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 119
Query: 176 TLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+DD ++ +G G + + F+ ++
Sbjct: 120 EVDDMLREVS----DGSGEINIQQFAALL 144
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D++G I++ EL V LG + ++ +D +G+ +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA-EVNDLMNEIDVDGNHQIE 64
Query: 197 FEDFSRMMELQ 207
F +F +M Q
Sbjct: 65 FSEFLALMSRQ 75
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLEA----LISRLKE------------TFDFFDADHDGKITAEELFGVFTKLGDELCTL 177
I E ++ ++KE F FD + DG I EEL + G E T
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLEA----LISRLKET------------FDFFDADHDGKITAEELFGVFTKLGDELCTL 177
I E ++ ++KE F FD + DG I EEL + G E T
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATG-EHVTE 131
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 69
Query: 134 IPLEA----LISRLKET------------FDFFDADHDGKITAEELFGVFTKLGDELCTL 177
I E ++ ++KE F FD + DG I EEL + G E T
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG-EHVTE 128
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
+D ++ DKN DG + F++F +MME
Sbjct: 129 EDIEDLMKDSDKNNDGRIDFDEFLKMME 156
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 59
Query: 131 DGYIPLE---ALISR----------LKETFDFFDADHDGKITAEELFGVFTKLGDELC 175
+ I AL+SR L E F FD + DG I+A EL V T +G++L
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 117
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D++G I++ EL V LG + ++ +D +G+ +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA-EVNDLMNEIDVDGNHQIE 64
Query: 197 FEDFSRMMELQ 207
F +F +M Q
Sbjct: 65 FSEFLALMSRQ 75
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 70 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDRE 129
MS +++ + E +A L D+DN G + SEL ++ LG P++ EV +++E+D +
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGL-SPSEAEVADLMNEIDVD 59
Query: 130 GDGYIPLE---ALISR----------LKETFDFFDADHDGKITAEELFGVFTKLGDELC 175
G+ I AL+SR L E F FD + DG I+A EL V T +G++L
Sbjct: 60 GNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 118
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D+ G I+A EL V LG + ++ +D +G+ +
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEA-EVADLMNEIDVDGNHAIE 65
Query: 197 FEDFSRMMELQ 207
F +F +M Q
Sbjct: 66 FSEFLALMSRQ 76
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLEA----LISRLKE------------TFDFFDADHDGKITAEELFGVFTKLGDELCTL 177
I E ++ ++KE F FD + DG I EEL + G+ +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIE- 131
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
+D ++ DKN DG + F++F +MME
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL---EALLIRL-GADPPT---------QEEVKS 121
+LD +L + + LD +NDG++ R EL +RL G D + ++++ S
Sbjct: 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDS 385
Query: 122 MLSEVDREGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTK 169
++ +D +G G I I+ R++ F FD D GKI+ +ELF +F++
Sbjct: 386 LMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQ 445
Query: 170 LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMME 205
D +++ +I VD N DG V F +F M++
Sbjct: 446 -ADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG-------DGY 133
E+ +A L D +NDG + EL+ + LG + P +E + ++ E D EG D Y
Sbjct: 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE-ILDLIDEYDSEGRHLMKYDDFY 82
Query: 134 IPL-EALISR-----LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALV 187
I + E ++ R +K F FD DH GKI+ + L V +LG E T ++ R MI
Sbjct: 83 IVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLTDEELRAMIEEF 141
Query: 188 DKNGDGFVCFEDF 200
D +GDG + +F
Sbjct: 142 DLDGDGEINENEF 154
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL---EALLIRLGADPPT-------QEEVKSMLS 124
+L+ EL Q + LD + DG + R EL L++ D + + EV +L
Sbjct: 309 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 368
Query: 125 EVDREGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEE---LFGVFTK 169
VD + +GYI ++ RL F FD+D GKIT EE LFGV T+
Sbjct: 369 SVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV-TE 427
Query: 170 LGDELC--TLDDCRGMIALVDKNGDGFVCFEDFSRMME 205
+ DE L +C DKN DG V FE+F MM+
Sbjct: 428 VDDETWHQVLQEC-------DKNNDGEVDFEEFVEMMQ 458
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL +D++ DG + R+EL + L+ G D + EV +L
Sbjct: 353 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 412
Query: 125 EVDREGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTKLGD 172
VD + +GYI ++ RL+ F FD+D+ GKI++ EL +F G
Sbjct: 413 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF---GV 469
Query: 173 ELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+ + +++ VDKN DG V F++F +M+
Sbjct: 470 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL---EALLIRLGADPPT-------QEEVKSMLS 124
+L+ EL Q + LD + DG + R EL L++ D + + EV +L
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 94
Query: 125 EVDREGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEE---LFGVFTK 169
VD + +GYI ++ RL F FD+D GKIT EE LFGV T+
Sbjct: 95 SVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGV-TE 153
Query: 170 LGDELC--TLDDCRGMIALVDKNGDGFVCFEDFSRMME 205
+ DE L +C DKN DG V FE+F MM+
Sbjct: 154 VDDETWHQVLQEC-------DKNNDGEVDFEEFVEMMQ 184
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL +D++ DG + R+EL + L+ G D + EV +L
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 389
Query: 125 EVDREGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTKLGD 172
VD + +GYI ++ RL+ F FD+D+ GKI++ EL +F G
Sbjct: 390 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF---GV 446
Query: 173 ELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+ + +++ VDKN DG V F++F +M+
Sbjct: 447 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL +D++ DG + R+EL + L+ G D + EV +L
Sbjct: 354 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 413
Query: 125 EVDREGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTKLGD 172
VD + +GYI ++ RL+ F FD+D+ GKI++ EL +F G
Sbjct: 414 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF---GV 470
Query: 173 ELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+ + +++ VDKN DG V F++F +M+
Sbjct: 471 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGAD-------PPTQEEVKSMLSEVDREGDGY 133
EL + +D++ DG + R EL +L + P + EV ++L D + +GY
Sbjct: 64 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 123
Query: 134 IPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCR 181
I ++ +L+ F FD D +GKI+ +EL VF G + +
Sbjct: 124 IDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWK 180
Query: 182 GMIALVDKNGDGFVCFEDFSRMME 205
MI+ +D N DG V FE+F +M++
Sbjct: 181 EMISGIDSNNDGDVDFEEFCKMIQ 204
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGAD-------PPTQEEVKSMLSEVDREGDGY 133
EL + +D++ DG + R EL +L + P + EV ++L D + +GY
Sbjct: 347 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 406
Query: 134 IPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCR 181
I ++ +L+ F FD D +GKI+ +EL VF G + +
Sbjct: 407 IDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWK 463
Query: 182 GMIALVDKNGDGFVCFEDFSRMME 205
MI+ +D N DG V FE+F +M++
Sbjct: 464 EMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 70 MSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDRE 129
+++++ + E+ +A L D +NDG + EL+ LG + P +E + ++ E D E
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKRE-ILDLIDEYDSE 71
Query: 130 G-------DGYIPL-EALISR-----LKETFDFFDADHDGKITAEELFGVFTKLGDELCT 176
G D YI E ++ R +K F FD DH GKI+ + L V +LG E T
Sbjct: 72 GRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-ETLT 130
Query: 177 LDDCRGMIALVDKNGDGFVCFEDF 200
++ R I D +GDG + +F
Sbjct: 131 DEELRAXIEEFDLDGDGEINENEF 154
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
LKE F FD D +G I+A EL V LG++L T ++ MI D +GDG V +E+F +
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKL-TDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 203 MM 204
MM
Sbjct: 70 MM 71
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL +A K+ D+D +G + SEL ++I LG + T EEV+ M+ E D +GDG +
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNY 64
Query: 137 EALISRL 143
E + +
Sbjct: 65 EEFVKMM 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
LKE F FD D +G I+A EL V LG++L T ++ MI D +GDG V +E+F +
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKL-TDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 203 MM 204
MM
Sbjct: 65 MM 66
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL +A K+ D+D +G + SEL ++I LG + T EEV+ M+ E D +GDG +
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNY 59
Query: 137 EALISRL 143
E + +
Sbjct: 60 EEFVKMM 66
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 75 SLDMNYELVQACKLLDRDNDGVVLRSEL----EALLIRLGADP------PTQEEVKSMLS 124
S D EL D++ DG + R+EL + L G D + EV +L
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 125 EVDREGDGYIPLEALIS------------RLKETFDFFDADHDGKITAEELFGVFTKLGD 172
VD + +GYI ++ RL+ F FD+D+ GKI++ EL +F G
Sbjct: 390 AVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIF---GV 446
Query: 173 ELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+ + +++ VDKN DG V F++F + +
Sbjct: 447 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 72 ADISLDMNYELVQACKL-LDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
A S D + + ++A L LD + G + + +L L R G P ++ +L ++D +G
Sbjct: 46 AQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSDG 103
Query: 131 DGYIP----LEALISRLKET-------FDFFDADHDGKITAEELFGVFTKLGDELCTL-- 177
G I L A I R + + F FD D+DG+IT EL V G++ +
Sbjct: 104 SGNIDYTEFLAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFN-GNKRGNITE 162
Query: 178 ---DDCRGMIALVDKNGDGFVCFEDFSRMMEL 206
+ + MI VDKNGDG + F +FS MM+L
Sbjct: 163 RDVNQVKKMIREVDKNGDGKIDFYEFSEMMKL 194
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 85 ACKLLDRDNDGVVLRSELEALLIRLGADPPTQE----EVKSMLSEVDREGDGYIPLEALI 140
A ++ D DNDG + +EL +L E +VK M+ EVD+ GDG I
Sbjct: 130 AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFS 189
Query: 141 SRLKET 146
+K T
Sbjct: 190 EMMKLT 195
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
L E F FD D +G I+A EL V T LG++L T D+ MI D +GDG + +E+F R
Sbjct: 10 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-TDDEVDEMIREADIDGDGHINYEEFVR 68
Query: 203 MM 204
MM
Sbjct: 69 MM 70
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL++A K+ DRD +G++ +EL ++ LG + T +EV M+ E D +GDG+I
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLG-EKLTDDEVDEMIREADIDGDGHINY 63
Query: 137 EALI 140
E +
Sbjct: 64 EEFV 67
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI------------- 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 141 ---SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
L + F FD + DG I EEL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 198 EDFSRMM 204
++F M
Sbjct: 151 DEFLEFM 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI------------- 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 141 ---SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
L + F FD + DG I EEL + G E T DD ++ DKN DG + +
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 198 EDFSRMM 204
++F M
Sbjct: 151 DEFLEFM 157
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI------------- 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKG 91
Query: 141 ---SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
L + F FD + DG I EEL + G E T DD ++ DKN DG + +
Sbjct: 92 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 198 EDFSRMM 204
++F M
Sbjct: 151 DEFLEFM 157
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRLKE-- 145
+LD D G + + +L+ L + G P ++ +L ++D +G G I I+ +
Sbjct: 60 VLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTEFIAAALDRK 117
Query: 146 ---------TFDFFDADHDGKITAEELFGVFTKLGDELCTL-----DDCRGMIALVDKNG 191
F FD D+DG+IT EL + G++ + + + MI VDKN
Sbjct: 118 QLSKKLIYCAFRVFDVDNDGEITTAELAHILYN-GNKKGNITQRDVNRVKRMIRDVDKNN 176
Query: 192 DGFVCFEDFSRMMEL 206
DG + F +FS MM+L
Sbjct: 177 DGKIDFHEFSEMMKL 191
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A + D+D DG + +L + +G PT+ E+ + +++ G++ + +
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 141 -----------------SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 183
L++ F FD + DG+I+ EL KL D +
Sbjct: 85 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI 144
Query: 184 IALVDKNGDGFVCFEDFSRMM 204
I VD NGDG V FE+F RMM
Sbjct: 145 IRDVDLNGDGRVDFEEFVRMM 165
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 119 VKSMLSEVDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD 178
VK L + R+ P E I L+E F FD D DG I +L +G + T
Sbjct: 5 VKYPLRNLSRKDRSLRPEE--IEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEM 61
Query: 179 DCRGMIALVDKNGDGFVCFEDFSRMM 204
+ + ++ N G V F+DF +M
Sbjct: 62 ELIELSQQINMNLGGHVDFDDFVELM 87
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A K+ DRD DG + +EL ++I LG + T EE+ M+ E D +GDG I
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLG-EKVTDEEIDEMIREADFDGDGMINY 138
Query: 137 EALI 140
E +
Sbjct: 139 EEFV 142
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Query: 90 DRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRLKETFDF 149
+ +N+G + +E ++ + + T+EE++ DR+GDG+
Sbjct: 56 ENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGF---------------- 99
Query: 150 FDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
I+ EL V LG E T ++ MI D +GDG + +E+F M+
Sbjct: 100 --------ISPAELRFVMINLG-EKVTDEEIDEMIREADFDGDGMINYEEFVWMI 145
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ K+ F FD + GKI EL + LG T + + +IA + N +G +
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQN-PTEAELQDLIAEAENNNNGQLN 64
Query: 197 FEDFSRMMELQ 207
F +F +M Q
Sbjct: 65 FTEFCGIMAKQ 75
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A + D+D DG + +L + +G PT+ E+ + +++ G++ + +
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 141 -----------------SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 183
L++ F FD + DG+I+ EL KL D +
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI 130
Query: 184 IALVDKNGDGFVCFEDFSRMM 204
I VD NGDG V FE+F RMM
Sbjct: 131 IRDVDLNGDGRVDFEEFVRMM 151
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I L+E F FD D DG I +L +G + T + + ++ N G V F+D
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 200 FSRMM 204
F +M
Sbjct: 69 FVELM 73
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
LKE F FD D +G I+A EL V T LG++L T ++ MI D +GDG + +E+F +
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKL-TDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 203 MM 204
+M
Sbjct: 65 VM 66
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D EL +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG I
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINY 59
Query: 137 EALI 140
E +
Sbjct: 60 EEFV 63
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+F +
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQ 69
Query: 203 MM 204
MM
Sbjct: 70 MM 71
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG +
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNY 64
Query: 137 EALISRL 143
E + +
Sbjct: 65 EEFVQMM 71
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+F +
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQ 68
Query: 203 MM 204
MM
Sbjct: 69 MM 70
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG +
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNY 63
Query: 137 EALISRL 143
E + +
Sbjct: 64 EEFVQMM 70
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +GDG +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGDGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG +P T+ E++ M++EVD +GDG I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-TEAELQDMINEVDADGDGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+F +
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 203 MM 204
MM
Sbjct: 66 MM 67
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNY 60
Query: 137 EALISRL 143
E + +
Sbjct: 61 EEFVQMM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+F +
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 203 MM 204
MM
Sbjct: 66 MM 67
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNY 60
Query: 137 EALISRL 143
E + +
Sbjct: 61 EEFVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+F +
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQ 66
Query: 203 MM 204
MM
Sbjct: 67 MM 68
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG +
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNY 61
Query: 137 EALISRL 143
E + +
Sbjct: 62 EEFVQMM 68
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F FD D +G I+A +L V T LG++L T ++ MI D +GDG V +EDF +
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEDFVQ 67
Query: 203 MM 204
MM
Sbjct: 68 MM 69
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + ++L ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 141 SRL 143
+
Sbjct: 67 QMM 69
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 147 FDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMMEL 206
F FDA+ DGKI+A EL LG T D+ + M+A +D +GDGF+ F++F+
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS--ITPDEVKHMMAEIDTDGDGFISFQEFTDFGRA 72
Query: 207 QR 208
R
Sbjct: 73 NR 74
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
K D + DG + +EL L LG+ P +EVK M++E+D +GDG+I +
Sbjct: 16 KRFDANGDGKISAAELGEALKTLGSITP--DEVKHMMAEIDTDGDGFISFQ 64
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I+ + F FD + DGKI++ EL LG T D+ R M+A +D +GDGF+ F++
Sbjct: 10 IADRERIFKRFDTNGDGKISSSELGDALKTLGS--VTPDEVRRMMAEIDTDGDGFISFDE 67
Query: 200 FSRMMELQR 208
F+ R
Sbjct: 68 FTDFARANR 76
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
K D + DG + SEL L LG+ P +EV+ M++E+D +GDG+I +
Sbjct: 18 KRFDTNGDGKISSSELGDALKTLGSVTP--DEVRRMMAEIDTDGDGFISFD 66
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI------------- 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 141 ---SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
L + F +D + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMWDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 198 EDFSRMM 204
++F M
Sbjct: 151 DEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI------------- 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 141 ---SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
L + F FD + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 198 EDFSRMM 204
+++ M
Sbjct: 151 DEWLEFM 157
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 65
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 66 FPEFLTMM 73
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 141 SRL 143
+ +
Sbjct: 71 TMM 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + K++D DN G + EL+ L R+G++ + E+K ++ D + G I I+
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSE-LMESEIKDLMDAADIDKSGTIDYGEFIA 70
Query: 142 ------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDK 189
L F +FD D G IT +E+ G + +DD MI +D+
Sbjct: 71 ATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD---MIKEIDQ 127
Query: 190 NGDGFVCFEDFSRMM 204
+ DG + + +F+ MM
Sbjct: 128 DNDGQIDYGEFAAMM 142
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
E I LKE F D D+ G IT +EL ++G EL
Sbjct: 6 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 43
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG + T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 83 VQAC-KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVD-REGDGYI------ 134
+Q C ++ D+DNDG V EL + L LG + PT E+ ++ +++ +E D
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKN-PTNAELNTIKGQLNAKEFDLATFKTVYR 65
Query: 135 -PLEALISRLKETFDFF---DADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKN 190
P++ + KE D F D + +G I EL + LGD L T + ++ V +
Sbjct: 66 KPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL-TSSEVEELMKEVSVS 124
Query: 191 GDGFVCFEDFSRMM 204
GDG + +E F M+
Sbjct: 125 GDGAINYESFVDML 138
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLG 171
+++E F FD D+DGK++ EEL LG
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLG 35
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 89 LDRDNDGVVLRSELEALLIRLGAD--PPTQEEVKSMLSEVDREGDGYIP----LEALISR 142
LD DN G + E+ L ++G PP ++ +L ++D G I L A I +
Sbjct: 66 LDVDNSGTLSSQEILDGLKKIGYQKIPP---DIHQVLRDIDSNASGQIHYTDFLAATIDK 122
Query: 143 ---LKE-----TFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC-RGMIALVDKNGDG 193
LK+ F FFD D +GKI+ EEL +F + E +D ++ VD NGDG
Sbjct: 123 QTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDG 182
Query: 194 FVCFEDFSRMMELQR 208
+ F +F MM ++
Sbjct: 183 EIDFHEFMLMMSKKK 197
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I+ L+ F D D+ G ++++E+ K+G + D ++ +D N G + + D
Sbjct: 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIP-PDIHQVLRDIDSNASGQIHYTD 114
Query: 200 F 200
F
Sbjct: 115 F 115
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 18/141 (12%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A + D+D DG + +L + +G PT+ E+ + +++ G++ + +
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGY-MPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 141 S-----------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM 183
L++ F FD + DG+I+ EL L D +
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI 130
Query: 184 IALVDKNGDGFVCFEDFSRMM 204
I VD NGDG V FE+F RMM
Sbjct: 131 IRDVDLNGDGRVDFEEFVRMM 151
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I L+E F FD D DG I +L +G + T + + ++ N G V F+D
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 200 FSRMM 204
F +M
Sbjct: 69 FVELM 73
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRL 143
+A L D+D DG + EL A +IR PT+EE++ M+SEVD +G+G I + +S +
Sbjct: 14 EAFGLFDKDGDGCITVEEL-ATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I KE F FD D DG IT EEL V L D+ T ++ + MI+ VD +G+G +
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEVDADGNGTIE 64
Query: 197 FEDFSRMM 204
F++F +M
Sbjct: 65 FDEFLSLM 72
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRL 143
+A L D+D DG + EL A +IR PT+EE++ M+SEVD +G+G I + +S +
Sbjct: 14 EAFGLFDKDGDGCITVEEL-ATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I KE F FD D DG IT EEL V L D+ T ++ + MI+ VD +G+G +
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDMISEVDADGNGTIE 64
Query: 197 FEDFSRMM 204
F++F +M
Sbjct: 65 FDEFLSLM 72
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
++ + E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D++G G
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK-KEEIKKMISEIDKDGSGT 82
Query: 134 IPLEALISRL 143
I E ++ +
Sbjct: 83 IDFEEFLTMM 92
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E FD FD D G I A+EL LG E ++ + MI+ +DK+G G + FE+F
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFE-PKKEEIKKMISEIDKDGSGTIDFEEFLT 90
Query: 203 MM 204
MM
Sbjct: 91 MM 92
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDE--LCTLDDCRGMIALVDKNGDGF 194
E +I+ K FD FDAD G I+ +EL V LG C LD +I VD++G G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELD---AIICEVDEDGSGT 72
Query: 195 VCFEDFSRMMELQ 207
+ FE+F MM Q
Sbjct: 73 IDFEEFLVMMVRQ 85
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+ E+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKCELDAIICEVDEDGSGT 72
Query: 134 IPLE----ALISRLKE 145
I E ++ ++KE
Sbjct: 73 IDFEEFLVMMVRQMKE 88
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E +I+ K FD FDAD G I+ +EL V LG + T ++ +I VD++G G +
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG-QNPTKEELDAIIEEVDEDGSGTID 74
Query: 197 FEDFSRMM 204
FE+F MM
Sbjct: 75 FEEFLVMM 82
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLEA----LISRLKE 145
I E ++ ++KE
Sbjct: 73 IDFEEFLVMMVRQMKE 88
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI------------- 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 141 ---SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
L + F D + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMXDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 198 EDFSRMM 204
++F M
Sbjct: 151 DEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI------------- 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKG 91
Query: 141 ---SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
L + F FD + DG I +EL + G E T DD ++ DKN DG + +
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATG-ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 198 EDFSRMM 204
++ M
Sbjct: 151 DEXLEFM 157
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 25/131 (19%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALIS--- 141
K LD + DG V E++A + + P + E ++ + +D +G+G I L
Sbjct: 7 KQLDANGDGSVSYEEVKAFV---SSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAA 63
Query: 142 ------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDK 189
LK + DAD DGK+T EE+ F K G E I D
Sbjct: 64 AVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVV-----DQIMKADA 118
Query: 190 NGDGFVCFEDF 200
NGDG++ E+F
Sbjct: 119 NGDGYITLEEF 129
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
KL+D D DG + + E+ + G E+V + + D GDGYI LE ++
Sbjct: 82 KLMDADGDGKLTKEEVTTFFKKFG-----YEKVVDQIMKADANGDGYITLEEFLA 131
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 43.1 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F FD D +G I+A EL V T LG++L T ++ MI D +GDG V +E+F +
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 203 MM 204
MM
Sbjct: 63 MM 64
Score = 37.0 bits (84), Expect = 0.009, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 141 SRL 143
+
Sbjct: 62 QMM 64
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E +I+ K FD FDAD G I+ +EL V LG T ++ +I VD++G G +
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQN-PTKEELDAIIEEVDEDGSGTID 63
Query: 197 FEDFSRMMELQ 207
FE+F MM Q
Sbjct: 64 FEEFLVMMVRQ 74
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 72 ADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD 131
A +S +M E A + D D G + EL ++ LG +P T+EE+ +++ EVD +G
Sbjct: 1 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGS 59
Query: 132 GYIPLEALI 140
G I E +
Sbjct: 60 GTIDFEEFL 68
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E F D D +G I+A EL V T LG++L T ++ MI D +GDG V +E+F +
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKL-TDEEVDEMIREADIDGDGQVNYEEFVQ 89
Query: 203 MM 204
MM
Sbjct: 90 MM 91
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++ D+D +G + +EL ++ LG + T EEV M+ E D +GDG + E +
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 141 SRL 143
+
Sbjct: 89 QMM 91
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP----L 136
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I L
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 137 EALISRLKET 146
+ ++K+T
Sbjct: 70 NLMARKMKDT 79
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
IS KE F FD D DG IT +EL V LG + T + + MI VD +G+G + F +
Sbjct: 9 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLG-QNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 200 FSRMM 204
F +M
Sbjct: 68 FLNLM 72
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ L++ F FD + DG+I+ EL KL D +I VD NGDG V FE+
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 200 FSRMM 204
F RMM
Sbjct: 66 FVRMM 70
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL A + D + DG + SEL + +L +++ ++ +VD GDG + E +
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A L D+D DG + EL ++ LG + PT+ E++ M++EVD +G+G I +
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLN-PTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 141 SRL 143
+ +
Sbjct: 70 TMM 72
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F +D D DG IT +EL V LG T + + MI VD +G+G +
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLN-PTEAELQDMINEVDADGNGTID 64
Query: 197 FEDFSRMM 204
F +F MM
Sbjct: 65 FPEFLTMM 72
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+++A K+ D + DGV+ E + ++ ++G +P T EV+ + E D +G+G I + +
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 141 SRLKET 146
+K++
Sbjct: 69 DLIKKS 74
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 146 TFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 200
F FDA+ DG I +E + K+G+E T + + D++G+G + +F
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIP 135
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 136 LEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALVDKNGDGF 194
+ I+ + F +D D+ G I EL + G L D +I D+ G G
Sbjct: 87 VWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKFDRQGRGQ 144
Query: 195 VCFEDF 200
+ F+DF
Sbjct: 145 IAFDDF 150
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS----- 141
+ DRDN G++ ++EL+ L G Q ++ + DR+G G I + I
Sbjct: 99 RTYDRDNSGMIDKNELKQALSGFGYRLSDQFH-DILIRKFDRQGRGQIAFDDFIQGCIVL 157
Query: 142 -RLKETFDFFDADHDGKI 158
RL + F +D D DG I
Sbjct: 158 QRLTDIFRRYDTDQDGWI 175
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E +I+ K FD FDAD G I+ + L V LG T ++ +I VD++G G +
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQN-PTKEELDAIIEEVDEDGSGTID 74
Query: 197 FEDFSRMM 204
FE+F MM
Sbjct: 75 FEEFLVMM 82
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S +M E A + D D G + L ++ LG +P T+EE+ +++ EVD +G G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNP-TKEELDAIIEEVDEDGSGT 72
Query: 134 IPLE----ALISRLKE 145
I E ++ ++KE
Sbjct: 73 IDFEEFLVMMVRQMKE 88
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 73 DISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG 132
+++ + E+ +A L D D G + EL+ + LG +P +EE+K M+SE+D+EG G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP-KKEEIKKMISEIDKEGTG 82
Query: 133 YI 134
+
Sbjct: 83 KM 84
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
++E FD FDAD G I +EL LG E ++ + MI+ +DK G G + F DF
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFE-PKKEEIKKMISEIDKEGTGKMNFGDFLT 91
Query: 203 MM 204
+M
Sbjct: 92 VM 93
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIP 135
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 136 LEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALVDKNGDGF 194
+ I+ + F +D D+ G I EL + G L D +I D+ G G
Sbjct: 88 VWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKFDRQGRGQ 145
Query: 195 VCFEDF 200
+ F+DF
Sbjct: 146 IAFDDF 151
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS----- 141
+ DRDN G++ ++EL+ L G Q ++ + DR+G G I + I
Sbjct: 100 RTYDRDNSGMIDKNELKQALSGFGYRLSDQFH-DILIRKFDRQGRGQIAFDDFIQGCIVL 158
Query: 142 -RLKETFDFFDADHDGKI 158
RL + F +D D DG I
Sbjct: 159 QRLTDIFRRYDTDQDGWI 176
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIP 135
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 136 LEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALVDKNGDGF 194
+ I+ + F +D D+ G I EL + G L D +I D+ G G
Sbjct: 69 VWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKFDRQGRGQ 126
Query: 195 VCFEDF 200
+ F+DF
Sbjct: 127 IAFDDF 132
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS----- 141
+ DRDN G++ ++EL+ L G Q ++ + DR+G G I + I
Sbjct: 81 RTYDRDNSGMIDKNELKQALSGFGYRLSDQFH-DILIRKFDRQGRGQIAFDDFIQGCIVL 139
Query: 142 -RLKETFDFFDADHDGKI 158
RL + F +D D DG I
Sbjct: 140 QRLTDIFRRYDTDQDGWI 157
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIP 135
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 136 LEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALVDKNGDGF 194
+ I+ + F +D D+ G I EL + G L D +I D+ G G
Sbjct: 65 VWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKFDRQGRGQ 122
Query: 195 VCFEDF 200
+ F+DF
Sbjct: 123 IAFDDF 128
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 48 SAPDRVGTPTSVLHEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLI 107
S DR E +G W ++ + + DRDN G++ ++EL+ L
Sbjct: 47 SMFDRENKAGVNFSEFTGVWKYIT---------DWQNVFRTYDRDNSGMIDKNELKQALS 97
Query: 108 RLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS------RLKETFDFFDADHDGKI 158
G Q ++ + DR+G G I + I RL + F +D D DG I
Sbjct: 98 GFGYRLSDQFH-DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWI 153
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIP 135
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 136 LEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCRGMIALVDKNGDGF 194
+ I+ + F +D D+ G I EL + G L D +I D+ G G
Sbjct: 66 VWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDI--LIRKFDRQGRGQ 123
Query: 195 VCFEDF 200
+ F+DF
Sbjct: 124 IAFDDF 129
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS----- 141
+ DRDN G++ ++EL+ L G Q ++ + DR+G G I + I
Sbjct: 78 RTYDRDNSGMIDKNELKQALSGFGYRLSDQFH-DILIRKFDRQGRGQIAFDDFIQGCIVL 136
Query: 142 -RLKETFDFFDADHDGKI 158
RL + F +D D DG I
Sbjct: 137 QRLTDIFRRYDTDQDGWI 154
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 23/102 (22%)
Query: 122 MLSEVDREGDGYIPLEALISRLKET------------FDFFDADHDGKITAEELFGVFT- 168
+ + D++ +G+I E I+ L T F+ +D +HDG IT +E+ +
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 169 --KLGDELCTLDD--------CRGMIALVDKNGDGFVCFEDF 200
K+ + TL++ + + L+DKN DG++ ++F
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 71 SADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREG 130
S++++ + E +A L D+DN+G + SEL ++ LG P++ EV +++E+D +G
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGL-SPSEAEVNDLMNEIDVDG 59
Query: 131 DGYIPLE---ALISR 142
+ I AL+SR
Sbjct: 60 NHQIEFSEFLALMSR 74
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVC 196
E I+ KE F FD D++G I++ EL V LG + ++ +D +G+ +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEA-EVNDLMNEIDVDGNHQIE 64
Query: 197 FEDFSRMMELQ 207
F +F +M Q
Sbjct: 65 FSEFLALMSRQ 75
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIP 135
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 136 LEALISRLKETFDFFDADHDGKITAEE----LFGVFTKLGDELCTLDDCRGMIALVDKNG 191
+ I+ + F +D D+ G I E L G +L D+ + +I D+ G
Sbjct: 69 VWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDI-----LIRKFDRQG 123
Query: 192 DGFVCFEDF 200
G + F+DF
Sbjct: 124 RGQIAFDDF 132
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSML-SEVDREGDGYIPLEALIS---- 141
+ DRDN G++ ++EL+ L GA ++ +L + DR+G G I + I
Sbjct: 81 RTYDRDNSGMIDKNELKQAL--SGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 138
Query: 142 --RLKETFDFFDADHDGKI 158
RL + F +D D DG I
Sbjct: 139 LQRLTDIFRRYDTDQDGWI 157
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
LKE F D + G I + L + LGDEL T D+ MIA D +G G V +E+F
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDEL-TEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 203 MM 204
+M
Sbjct: 68 LM 69
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
EL +A ++LD++ GV+ L +L LG D T++E+++M++E D +G G + E
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLG-DELTEDEIENMIAETDTDGSGTVDYE 63
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIP 135
L + +D+D GV+ +EL+ L P V+S++S DRE +
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 136 LEALISRLKETFDFFDADHDGKITAEELFGVFT--KLGDELCTLDDCRGMIALVDKNGDG 193
+ I+ + F +D D+ G I EL + +L D+ + +I D+ G G
Sbjct: 66 VWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDI-----LIRKFDRQGRG 120
Query: 194 FVCFEDF 200
+ F+DF
Sbjct: 121 QIAFDDF 127
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 87 KLLDRDNDGVVLRSELEALL--IRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS--- 141
+ DRDN G++ ++EL+ L RL + + ++ + DR+G G I + I
Sbjct: 78 RTYDRDNSGMIDKNELKQALSGYRL-----SDQFHDILIRKFDRQGRGQIAFDDFIQGCI 132
Query: 142 ---RLKETFDFFDADHDGKI 158
RL + F +D D DG I
Sbjct: 133 VLQRLTDIFRRYDTDQDGWI 152
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 142 RLKETFDFFDADHD--GKITAEELFGVFTKLGDEL----CTLDDCRGMIALVDKNGDGFV 195
+K F+ F A +I+ EEL V LG L TLD+ MI VDKNGDG V
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDE---MIEEVDKNGDGEV 62
Query: 196 CFEDFSRMM 204
FE+F MM
Sbjct: 63 SFEEFLVMM 71
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
L+ F FD D DG IT +EL LG L ++ MI D + DG V +E+F+R
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQ-EELDAMIREADVDQDGRVNYEEFAR 66
Query: 203 MM 204
M+
Sbjct: 67 ML 68
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 85 ACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRLK 144
A + D+D DG + EL + LG P QEE+ +M+ E D + DG + E L
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLG-QPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69
Query: 145 E 145
+
Sbjct: 70 Q 70
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A KL D D G + L+ + LG + T EE++ M+ E DR+GDG +
Sbjct: 18 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMIDEADRDGDGEVSE 76
Query: 137 EALISRLKET 146
+ + +K+T
Sbjct: 77 QEFLRIMKKT 86
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 147 FDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
F FD D GKI+ + L V +LG+ L T ++ + MI D++GDG V ++F R+M
Sbjct: 27 FKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEMIDEADRDGDGEVSEQEFLRIM 83
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 21/129 (16%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS----- 141
K +D + DG V E++A + + A ++ ++ + +D +G+G I
Sbjct: 7 KEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 142 ----------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 191
LK + D D DGK+T EE+ F K G ++ + D NG
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANG 120
Query: 192 DGFVCFEDF 200
DG++ E+F
Sbjct: 121 DGYITLEEF 129
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
KL+D D DG + + E+ + + G + ++ +K+ D GDGYI LE +
Sbjct: 82 KLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEFL 130
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 21/129 (16%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS----- 141
K +D + DG V E++A + + A ++ ++ + +D +G+G I
Sbjct: 7 KEIDVNGDGAVSYEEVKAFVSKKRA-IKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 142 ----------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 191
LK + D D DGK+T EE+ F K G ++ + D NG
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANG 120
Query: 192 DGFVCFEDF 200
DG++ E+F
Sbjct: 121 DGYITLEEF 129
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
KL+D D DG + + E+ + + G + ++ +K+ D GDGYI LE +
Sbjct: 82 KLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEFL 130
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
K D + DG + SEL L LG+ + +EV+ M++E+D +GDG+I IS
Sbjct: 10 KRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEFIS 62
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 200
++ F FD + DGKI+ EL LG + D+ + M+A +D +GDGF+ F +F
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
K D + DG + SEL L LG+ + +EV+ M++E+D +GDG+I IS
Sbjct: 9 KRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEFIS 61
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 200
++ F FD + DGKI+ EL LG + D+ + M+A +D +GDGF+ F +F
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGS--TSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A KL D D G + L+ + LG + T EE++ M+ E DR+GDG +
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMIDEADRDGDGEVSE 66
Query: 137 EALISRLKET 146
+ + +K+T
Sbjct: 67 QEFLRIMKKT 76
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 147 FDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
F FD D GKI+ + L V +LG+ L T ++ + MI D++GDG V ++F R+M
Sbjct: 17 FKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEMIDEADRDGDGEVSEQEFLRIM 73
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 72 ADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD 131
D S + E +A +L DR DG +L S+ ++ LG +P E +K + + E +
Sbjct: 1 CDFSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMN 60
Query: 132 -------GYIPLEALISRLK---------ETFDFFDADHDGKITAEELFGVFTKLGDELC 175
++P+ I++ K E FD + +G + E+ V LG+++
Sbjct: 61 LKTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM- 119
Query: 176 TLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
T ++ ++A ++ +G + +E+ RM+
Sbjct: 120 TEEEVEQLVA-GHEDSNGCINYEELVRMV 147
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A +L D DN G + +L + LG + T+EE++ M++E DR D I
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNEIDE 64
Query: 137 EALISRLKET 146
+ I +K+T
Sbjct: 65 DEFIRIMKKT 74
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 146 TFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
F FD D+ G IT ++L V +LG+ L T ++ + MIA D+N D + ++F R+M
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENL-TEEELQEMIAEADRNDDNEIDEDEFIRIM 71
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 135 PLEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGM----IALVDKN 190
PL + ++L F +D D DGKI+ E+ V + T + + + D++
Sbjct: 108 PLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADED 167
Query: 191 GDGFVCFEDFSRMME 205
GDG V F +F++ +E
Sbjct: 168 GDGAVSFVEFTKSLE 182
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 26/140 (18%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADP-----------PTQEEVKSMLSEVDRE 129
E +A +L DR DG +L S+ ++ LG +P P +E+KS VD E
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS--RRVDFE 68
Query: 130 GDGYIPLEALISRLK---------ETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDC 180
++P+ +++ + E F FD + +GK+ EL V T LG+++ T ++
Sbjct: 69 --TFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKM-TEEEV 125
Query: 181 RGMIALVDKNGDGFVCFEDF 200
++A ++ +G + +E F
Sbjct: 126 ETVLA-GHEDSNGCINYEAF 144
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 13/67 (19%)
Query: 118 EVKSMLSEVDREGDGYIPLEALIS-------------RLKETFDFFDADHDGKITAEELF 164
E++ M++EVD +G+G I ++ ++E F FD D +G I+A EL
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 165 GVFTKLG 171
V T LG
Sbjct: 62 HVMTNLG 68
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEAL 139
EL +D D +G + E ++ R D ++EE++ D++G+GYI L
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGD-- 131
S + E +A +L DR DG +L S+ ++ LG +P E +K + + E +
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 132 -----GYIPLEALISRLK---------ETFDFFDADHDGKITAEELFGVFTKLGDELCTL 177
++P+ I++ K E FD + +G + E+ V LG+++ T
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM-TE 119
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMM 204
++ ++A ++ +G + +E+ RM+
Sbjct: 120 EEVEQLVA-GHEDSNGCINYEELVRMV 145
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 200
LK + D D DGK+T EE+ F K G ++ + D NGDG++ E+F
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANGDGYITLEEF 59
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
KL+D D DG + + E+ + + G + ++ +K+ D GDGYI LE +
Sbjct: 12 KLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEFL 60
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 84 QACKLLDRDNDGVVLRSELEALLIRLGADPPTQE--EVKSML-SEVDRE--------GDG 132
QA L DR G + ++ + LL G +P E E++S L +EVD E +G
Sbjct: 9 QAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPNG 68
Query: 133 Y-IPLEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCT--LDDCRGMIALVDK 189
+ +P + + F FD D G I EL V T LG++L +D+ + +
Sbjct: 69 FDMPGDP--EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV--- 123
Query: 190 NGDGFVCFEDFSRMM 204
DG V + DF +M+
Sbjct: 124 -KDGMVNYHDFVQMI 137
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 27/143 (18%)
Query: 79 NYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL-- 136
++E + + D G++L E L I+ T+ ++ ++ E D G+G I
Sbjct: 21 DFETPEGSGRVSTDQIGIIL----EVLGIQ-----QTKSTIRQLIDEFDPFGNGDIDFDS 71
Query: 137 ---------------EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCR 181
E + L+E F +D + +G I+ + + + +L DE + +D
Sbjct: 72 FKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLD 130
Query: 182 GMIALVDKNGDGFVCFEDFSRMM 204
MI +D +G G V FE+F +M
Sbjct: 131 AMIDEIDADGSGTVDFEEFMGVM 153
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPP--TQEEVKSMLSEVDREGDGYIPLEALISRLKE 145
+LD+D DG + EL ++L +D + +E K++++ D++GDG I +E + + E
Sbjct: 49 ILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108
Query: 146 T 146
+
Sbjct: 109 S 109
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFEDF 200
+K+ F D D DG I +EL + + L + + ++A DK+GDG + E+F
Sbjct: 43 VKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 201 SRMM 204
S ++
Sbjct: 103 STLV 106
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 141 SRLKETFDFFDADHDGKITAEELFGVFTKL--GDELCTLDDCRGMIALVDKNGDGFVCFE 198
S+LKE F D D G I +EL + G + T + + +A D +GDG + E
Sbjct: 41 SQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAE 100
Query: 199 DFSRMME 205
+F M++
Sbjct: 101 EFQEMVQ 107
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 77 DMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
D E+++A KL D D G + L+ + LG + T EE++ + E DR+GDG +
Sbjct: 101 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEELQEXIDEADRDGDGEVSE 159
Query: 137 EALISRLKET 146
+ + K+T
Sbjct: 160 QEFLRIXKKT 169
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 73 DISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG 132
+++ + E+ +A L D D G + EL+ LG P +EE+K +SE+D+EG G
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGF-EPKKEEIKKXISEIDKEGTG 82
Query: 133 ------YIPLEALISRLKET-------FDFFDADHDGKITAEELFGVFTKLGDELCTLDD 179
++ + K+T F FD D GKI+ + L V +LG+ L T ++
Sbjct: 83 KXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENL-TDEE 141
Query: 180 CRGMIALVDKNGDGFVCFEDFSRM 203
+ I D++GDG V ++F R+
Sbjct: 142 LQEXIDEADRDGDGEVSEQEFLRI 165
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A +L D+DND + EL ++ LGA+ PT++++ ++ + D++ G E +
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGAN-PTKQKISEIVKDYDKDNSGKFDQETFL 73
Query: 141 S 141
+
Sbjct: 74 T 74
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 144 KETFDFFDADHDGKITAEELFGVFTKLG 171
KE F FD D+D K+TAEEL V LG
Sbjct: 17 KEAFQLFDKDNDNKLTAEELGTVMRALG 44
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 74 ISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGY 133
+S + E+ +A L D + G + EL+ + LG D + E+ +++E DREG+GY
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVK-KPEILELMNEYDREGNGY 59
Query: 134 IPLEALISRLKE 145
I + + + E
Sbjct: 60 IGFDDFLDIMTE 71
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 141 SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 200
+KE FD FD + G I EL LG ++ + ++ D+ G+G++ F+DF
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKK-PEILELMNEYDREGNGYIGFDDF 65
Query: 201 SRMM 204
+M
Sbjct: 66 LDIM 69
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALI---- 140
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I
Sbjct: 28 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 80
Query: 141 ---------SRLKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 187
+L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 81 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140
Query: 188 DKNGDGFVCFEDF 200
DK+GDG + FE+F
Sbjct: 141 DKDGDGRISFEEF 153
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALI---- 140
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I
Sbjct: 14 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 66
Query: 141 ---------SRLKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 187
+L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 67 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 126
Query: 188 DKNGDGFVCFEDF 200
DK+GDG + FE+F
Sbjct: 127 DKDGDGRISFEEF 139
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 85 ACKLLDRDNDGVVLRSEL-EALLIRLG---ADPPTQEEVKSMLSEVDREGDGYIPLE 137
A ++ D D DG + EL + L + +G D Q+ V + D++GDG I E
Sbjct: 81 AFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 137
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALI---- 140
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I
Sbjct: 27 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 79
Query: 141 ---------SRLKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 187
+L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 80 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 139
Query: 188 DKNGDGFVCFEDF 200
DK+GDG + FE+F
Sbjct: 140 DKDGDGRISFEEF 152
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEE--VKSMLSEVDREGDGYIPLEALI---- 140
K LD DN G + E +L P Q+ V+ ++ D +G+G + + I
Sbjct: 13 KKLDLDNSGSLSVEEFMSL-------PELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 65
Query: 141 ---------SRLKETFDFFDADHDGKITAEELFGVFTKL-GDEL--CTLDD-CRGMIALV 187
+L+ F +D D DG I+ ELF V + G+ L L I
Sbjct: 66 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 125
Query: 188 DKNGDGFVCFEDF 200
DK+GDG + FE+F
Sbjct: 126 DKDGDGRISFEEF 138
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 85 ACKLLDRDNDGVVLRSEL-EALLIRLG---ADPPTQEEVKSMLSEVDREGDGYIPLEAL 139
A ++ D D DG + EL + L + +G D Q+ V + D++GDG I E
Sbjct: 80 AFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 138
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 141 SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDF 200
L+E F +D + +G I+ + + + +L DE + +D MI +D +G G V FE+F
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 201 SRMM 204
+M
Sbjct: 62 MGVM 65
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 116 QEEVKSMLSEVDREGDGYIP---LEALISRLKETF---------DFFDADHDGKITAEEL 163
Q+E++ D+EG+GYI + +++ L ET D DAD G + EE
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 164 FGVFTKLGDE 173
GV T GDE
Sbjct: 62 MGVMTG-GDE 70
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 78 MNYELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLE 137
M EL +A +L D++ +G + + +L L + + E++ +M+ E+D +G G + E
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAEL-DETLSSEDLDAMIDEIDADGSGTVDFE 59
Query: 138 ALI 140
+
Sbjct: 60 EFM 62
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSR 202
L F FD + DG I EEL + G+ + +D ++ DKN DG + F++F +
Sbjct: 12 LANCFRIFDKNADGFIDIEELGEILRATGEHVIE-EDIEDLMKDSDKNNDGRIDFDEFLK 70
Query: 203 MME 205
MME
Sbjct: 71 MME 73
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 23/102 (22%)
Query: 122 MLSEVDREGDGYIPLEALI------------SRLKETFDFFDADHDGKITAEELFGVFTK 169
+ + D +G+G I E + +LK F+ +D + DG IT EE+ +
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 170 LGD-----------ELCTLDDCRGMIALVDKNGDGFVCFEDF 200
+ D E L+ +D+N DG V ++F
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
EL +A ++D+D DG + +L+ + LG PP +E+ +ML E G + A +
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPD-DELNAMLKEC----PGQLNFTAFL 71
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELC 175
+ L+ F FD D G I + L + +GD
Sbjct: 72 TLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFS 119
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLG-----DEL-CTLDDCRGMIALV 187
+ LKE F D D DG I E+L +F+ LG DEL L +C G +
Sbjct: 15 MQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFT 68
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A ++D++ DG + + +L +L +G +P T E ++ M+SE + + L
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNP-TDEYLEGMMSEAPGPINFTMFLTMFG 66
Query: 141 SRLKET---------FDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMI--ALVDK 189
+L T F FD + G I + L + T +GD T ++ M A +DK
Sbjct: 67 EKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRF-TDEEVDEMYREAPIDK 125
Query: 190 NGDGFVCFEDFSRMM 204
G+ + +F+R++
Sbjct: 126 KGN--FNYVEFTRIL 138
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 124 SEVDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELFGVF-----TKLGDE-LCTL 177
+E ++ +G PL + ++L F +D D D KI+ +EL V + DE L ++
Sbjct: 96 NEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSI 155
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
D I D++GD + F +F +++E
Sbjct: 156 ADR--TIQEADQDGDSAISFTEFVKVLE 181
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 141 SRLKETFDFFDADHDGKITAEELFGVFTKL--GDELCTLDDCRGMIALVDKNGDGFVCFE 198
+++K+ F F D D G + EEL K G T + + ++A D +GDG + E
Sbjct: 42 NQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
Query: 199 DFSRMM 204
+F M+
Sbjct: 102 EFQEMV 107
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 87 KLLDRDNDGVVLRSELEALLIRL--GADPPTQEEVKSMLSEVDREGDGYIPLE 137
+ +D D G + EL+ L + GA T+ E KS+++ D +GDG I E
Sbjct: 49 RFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 90 DRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIPLEALISRL 143
D DG + +E+ A L+ G +++ ++++ + DR+ G Y+ L + R+
Sbjct: 103 DSSGDGRLDSNEVRAALLSSGYQV-SEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRV 161
Query: 144 KETFDFFDADHDGKIT 159
+ F F+D + G++T
Sbjct: 162 RNVFAFYDRERTGQVT 177
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + +D D G + EL+A L R+GA+ + E+ + D + G I + I+
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLK-ESEILDLXQAADVDNSGTIDYKEFIA 87
Query: 142 ------------RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDK 189
L F +FD D G IT +EL + G E +++ + VD+
Sbjct: 88 ATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEE---LXRDVDQ 144
Query: 190 NGDGFVCFEDF 200
+ DG + + +F
Sbjct: 145 DNDGRIDYNEF 155
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
E I+ LKE F+ DAD G+IT EEL ++G L
Sbjct: 23 EEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 124 SEVDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELFGVF-----TKLGDE-LCTL 177
+E ++ +G PL + ++L F +D D D KI+ +EL V + DE L ++
Sbjct: 96 NEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSI 155
Query: 178 DDCRGMIALVDKNGDGFVCFEDFSRMME 205
D I D++GD + F +F +++E
Sbjct: 156 ADR--TIQEADQDGDSAISFTEFVKVLE 181
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 141 SRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDD--CRGMIALVDKNGDGFVCFE 198
+++KE F+ D D G I EEL GV L+D + ++A D + DG + +
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 199 DFSRMM 204
+F++M+
Sbjct: 101 EFAKMV 106
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 17/127 (13%)
Query: 95 GVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL------------EALISR 142
G+ E + LL G + + + + + D DG++ E + +
Sbjct: 35 GLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQK 94
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKL----GDELCTLDDCRGMI-ALVDKNGDGFVCF 197
LK F +DAD +G I EL +F + G + + ++ ++ +D N DG +
Sbjct: 95 LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTL 154
Query: 198 EDFSRMM 204
E+F M
Sbjct: 155 EEFINGM 161
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLGD-----------ELCTLDDCRGMIALVDKN 190
+LK F+ +D + DG IT EE+ + + D E + +D+N
Sbjct: 10 KLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRN 69
Query: 191 GDGFVCFEDF 200
DG V E+F
Sbjct: 70 QDGVVTIEEF 79
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 18/109 (16%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGA--DPPTQEEVKSMLSEVDREGDGYIPLEA 138
E +A +L D + G + + L+ +L + G +P E M +E D G+G I
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNE---MFNEADATGNGKIQFPE 63
Query: 139 LIS----RLKET---------FDFFDADHDGKITAEELFGVFTKLGDEL 174
+S R+K+T F FD + G I L LGD L
Sbjct: 64 FLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRL 112
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLG--DELCTLDDCRGMIALVDKNGDGFVCF 197
+S KE F+ FD++ G IT E L V + G E ++ M D G+G + F
Sbjct: 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNE---MFNEADATGNGKIQF 61
Query: 198 EDFSRMM 204
+F MM
Sbjct: 62 PEFLSMM 68
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ ++E F FD D +G I+ +EL LG + + +I +D +GDG V FE+
Sbjct: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLG-YMPNEVELEVIIQRLDMDGDGQVDFEE 93
Query: 200 FSRMM 204
F ++
Sbjct: 94 FVTLL 98
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E +A +L+D+D DG + ++++ A LG T++E+ SM++E + + L
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGR-LCTEQELDSMVAEAPGPINFTMFLTIFG 116
Query: 141 SRLKET---------FDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNG 191
R+ T F+ FD + DGK E L T G++ + D+ ++ +G
Sbjct: 117 DRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKF-SQDEVDQALSEAPIDG 174
Query: 192 DGFVCFEDFSRMM 204
+G + + F++++
Sbjct: 175 NGLIDIKKFAQIL 187
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIA 185
+ KE F D D DG I+ ++ F LG LCT + M+A
Sbjct: 56 VQEFKEAFQLIDQDKDGFISKNDIRATFDSLG-RLCTEQELDSMVA 100
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 93 NDGVVLRSELEALL----IRLGADPPTQEEVKSMLSEVDREGDG------YIPLEALISR 142
DG + EL+ L I G P E + M+S +DR+ G + L A+++
Sbjct: 14 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 73
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
++ F FD+D G + +EL T +G L
Sbjct: 74 WRQHFISFDSDRSGTVDPQELQKALTTMGFRL 105
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFDAD-HDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F D DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQN-PTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFDAD-HDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F D DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2Z0F|A Chain A, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
pdb|2Z0F|B Chain B, Crystal Structure Of Putative Phosphoglucomutase From
Thermus Thermophilus Hb8
Length = 524
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 107 IRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRLKETFDFFDADHDGKI 158
+R+G DP ++ + G +PLE + L TF F DHDGKI
Sbjct: 211 LRIGVDPLGGASLRVWERLAESHG---LPLEVVNPTLDPTFRFMPKDHDGKI 259
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 93 NDGVVLRSELEALL----IRLGADPPTQEEVKSMLSEVDREGDG------YIPLEALISR 142
DG + EL+ L I G P E + M+S +DR+ G + L A+++
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
++ F FD D G + +EL T +G L
Sbjct: 105 WRQHFISFDTDRSGTVDPQELQKALTTMGFRL 136
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFF-DADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVQGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL ++ LG +P T EE++ M+ EVD +G G + + +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFL 78
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
F MM
Sbjct: 77 FLVMM 81
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
DG + EL ++ LG +P T EE++ M+ EVD +G G +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTV 72
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
+ MM
Sbjct: 77 WLVMM 81
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYI 134
DG + EL ++ LG +P T EE++ M+ EVD +G G +
Sbjct: 33 DGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTV 72
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 141 SRLKETFDFFD-ADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
+ K FD F DG I+ +EL V LG + T ++ + MI VD++G G V F++
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDE 76
Query: 200 FSRMM 204
+ MM
Sbjct: 77 WLVMM 81
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 139 LISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 198
I R K FDF D + +GKIT +E + +K D++C + A ++ VC E
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVE 69
Query: 199 DFSR 202
F R
Sbjct: 70 AFFR 73
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 139 LISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 198
I R K FDF D + +GKIT +E + +K D++C + A ++ VC E
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVE 69
Query: 199 DFSR 202
F R
Sbjct: 70 AFFR 73
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 139 LISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 198
I R K FDF D + +GKIT +E + +K D++C + A ++ VC E
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVE 69
Query: 199 DFSR 202
F R
Sbjct: 70 AFFR 73
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 139 LISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 198
I R K FDF D + +GKIT +E + +K D++C + A ++ VC E
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVE 69
Query: 199 DFSR 202
F R
Sbjct: 70 AFFR 73
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 139 LISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFE 198
I R K FDF D + +GKIT +E + +K D++C + A ++ VC E
Sbjct: 18 WIKRHKHMFDFLDINGNGKITLDE---IVSKASDDICA-----KLEATPEQTKRHQVCVE 69
Query: 199 DFSR 202
F R
Sbjct: 70 AFFR 73
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLGDEL--CTL---------DDCRGMIALVDKN 190
+L F+ +D + DG IT EE+ + + D + CT +DKN
Sbjct: 139 KLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKN 198
Query: 191 GDGFVCFEDF 200
DG V ++F
Sbjct: 199 KDGVVTIDEF 208
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPP--TQEEVKSMLSEVDREGDGYI 134
+ +D D G + EL+ L + +D T+ E KS++ D +GDG I
Sbjct: 48 RFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 141 SRLKETFDFFDADHDGKITAEELFGVFTKLGDEL--CTLDDCRGMIALVDKNGDGFVCFE 198
S++K+ F F D D G + +EL K + T + + ++ D +GDG + +
Sbjct: 41 SQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGAD 100
Query: 199 DFSRMM 204
+F M+
Sbjct: 101 EFQEMV 106
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 139 LISRLKETFDFFDADHDGKITAEEL 163
I R K F+F D +H+GKI+ +E+
Sbjct: 14 WIGRHKHMFNFLDVNHNGKISLDEM 38
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 152 ADHDGKITAEELFGVFTKLGDELC----TLDDCRGMIALVDKNGDGFVCFEDFSRM 203
A DG++ AEEL T+ G +L+ CR MIA++D++ G + F F +
Sbjct: 10 AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKEL 65
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 25/91 (27%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDE 173
T+EE+ + D+ DGYI LE L L+ T E
Sbjct: 7 KTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------------------------GE 41
Query: 174 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
T DD ++ DKN DG + +++F M
Sbjct: 42 TITEDDIEELMKDGDKNNDGRIDYDEFLEFM 72
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 152 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 741 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 800
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 117 EEVKSMLSEVDREGDGYIPL---EALISRLKE---TFDFFDADHDGKITAEEL 163
E +SM++ +DR+G+G + L L +R++ F FD D G ++A E+
Sbjct: 577 ESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEM 629
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 152 ADHDGKITAEELFGVFTKLGDELC----TLDDCRGMIALVDKNGDGFVCFEDFSRM 203
A DG++ AEEL T+ G +L+ CR MIA++D++ G + F F +
Sbjct: 10 AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKEL 65
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL----VDKN 190
+L+ TF+ +D + DG I EE+ + + D + D R + + +DKN
Sbjct: 93 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 152
Query: 191 GDGFVCFEDF 200
DG V ++F
Sbjct: 153 KDGIVTLDEF 162
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 52 RVGTPTSVLHEISGDWSDMSADISLDMNYELVQACKLLDRDNDGVVLRSELEALLIRLGA 111
++G L EI + +MS+ + E ++A K DR+ G++ +E+ +L LG
Sbjct: 57 KMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG- 115
Query: 112 DPPTQEEVKSMLSEVD-REG-DGYIPLEALISRL 143
+ T+++ + + D RE DG I E L+ ++
Sbjct: 116 ERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKV 149
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
++RL+ F DA+ G++ EE + T+L D + +D + DG + F++
Sbjct: 26 LARLRSVFAACDANRSGRLEREEFRALCTEL---RVRPADAEAVFQRLDADRDGAITFQE 82
Query: 200 FSR 202
F+R
Sbjct: 83 FAR 85
>pdb|1JEQ|B Chain B, Crystal Structure Of The Ku Heterodimer
pdb|1JEY|B Chain B, Crystal Structure Of The Ku Heterodimer Bound To Dna
Length = 565
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 113 PPTQEEVKSMLSE-VDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELF 164
PP Q+ + +ML+ + IPL S++K F +A ++TA+E+F
Sbjct: 506 PPIQQHIWNMLNPPAEVTTKSQIPL----SKIKTLFPLIEAKKKDQVTAQEIF 554
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 21/87 (24%)
Query: 81 ELVQACKLLDRDNDGVVLRSEL----EALLIRLGADPPTQEEVKSMLSEVDREGDGYIPL 136
+L A KL D DNDG + R+E+ +A+ +G EE + VDR
Sbjct: 100 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDR-------- 151
Query: 137 EALISRLKETFDFFDADHDGKITAEEL 163
F D + DGK+T +E
Sbjct: 152 ---------IFAMMDKNADGKLTLQEF 169
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 138 ALISRLKETFDFFDADHDGKITAEELF----GVFTKLGDELCTLDD-------CRGMIAL 186
L +L+ F +D D+DG IT E+ ++ +G+ + ++ + A+
Sbjct: 96 TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAM 155
Query: 187 VDKNGDGFVCFEDFS 201
+DKN DG + ++F
Sbjct: 156 MDKNADGKLTLQEFQ 170
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL----VDKN 190
+L+ TF+ +D + DG I EE+ + + D + D R + + +DKN
Sbjct: 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 185
Query: 191 GDGFVCFEDF 200
DG V ++F
Sbjct: 186 KDGIVTLDEF 195
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFEDF 200
+K+ F D D G I +EL + + L + + ++A DK+GDG + E+F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 201 SRMM 204
S ++
Sbjct: 103 STLV 106
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 152 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 203
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 25 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 83
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 93 NDGVVLRSELEALL----IRLGADPPTQEEVKSMLSEVDREGDG------YIPLEALISR 142
DG + EL+ L I G P E + M+S +DR+ G + L A+++
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
++ F D D G + +EL T +G L
Sbjct: 105 WRQHFISLDTDRSGTVDPQELQKALTTMGFRL 136
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 139 LISRLKETFDFFDADHDGKITAEEL 163
I R K F+F D +H+G+I+ +E+
Sbjct: 14 WIGRHKHMFNFLDVNHNGRISLDEM 38
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 152 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 203
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 25 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 83
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 120 KSMLSEVDREGDGYIPLEAL------ISRLKETFDFFDADHDGKITAEELFGVFTKLGDE 173
+SM++ +D + G + E I R + + FD D G I + EL G F G
Sbjct: 61 RSMVAVMDSDTTGKLGFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFH 120
Query: 174 L 174
L
Sbjct: 121 L 121
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + + LDRD + E L +LG Q E + + + DR G G + LE +
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGL-VLDQAEAEGVCRKWDRNGSGTLDLEEFLR 97
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIA 185
L+ + I A F + GD + T+DD RG+ +
Sbjct: 98 ALRPP---MSQAREAVIAAA--FAKLDRSGDGVVTVDDLRGVYS 136
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 152 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 203
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 14 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 72
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 139 LISRLKETFDFFDADHDGKITAEE 162
I R K F+F D +H+GKI+ +E
Sbjct: 14 WIGRHKHXFNFLDVNHNGKISLDE 37
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 152 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 203
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 14 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 72
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALISRLKE 145
+ D++ DG + E A L LG ++ E ++VD G+G + L+ L++ +++
Sbjct: 110 MCDKNADGQINADEFAAWLTALG---MSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEV 126
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML E
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAMLKEA 49
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 25/91 (27%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDE 173
T+EE+ + D+ DGYI LE L L+ T E
Sbjct: 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------------------------GE 46
Query: 174 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
T DD ++ DKN DG + +++F M
Sbjct: 47 TITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML +E G + +
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAML----KEAPGPLNFTMFL 61
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
S ++ F FD K+ E + + +GD
Sbjct: 62 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF 108
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 176 TLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
TLDD + +DKNGDG V FE+F ++
Sbjct: 48 TLDD---LFQELDKNGDGEVSFEEFQVLV 73
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL----VDKN 190
+L+ TF+ +D + DG I EE+ + + D + D R + + +DKN
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKN 149
Query: 191 GDGFVCFEDF 200
DG V ++F
Sbjct: 150 KDGIVTLDEF 159
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML +E G + +
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAML----KEAPGPLNFTMFL 62
Query: 141 S-------------RLKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
S ++ F FD K+ E + + +GD
Sbjct: 63 SIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF 109
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFEDF 200
+K+ F D D G I +EL + + L + + ++A DK+GDG + E+F
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
Query: 201 SRMM 204
S ++
Sbjct: 67 STLV 70
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 152 ADHDGKITAEELFGVFTK-------LGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRM 203
A D +++A EL + K L + +D CR M+A++D + G + FE+F +
Sbjct: 21 AGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 79
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 142 RLKETFDFFDADHDGKITAEELFGVFTKLGDELCTL-------DDCRGMIAL----VDKN 190
+L+ TF+ +D + DG I EE+ + + D + D R + + +DKN
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 149
Query: 191 GDGFVCFEDF 200
DG V ++F
Sbjct: 150 KDGIVTLDEF 159
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 145 ETFDFFDADHDGKITAEELFGVFTKLGDELC-TLDDCR------GMIALVDKNGDGFVCF 197
+T+ +D DH G I EEL L ++ T+DD + M+ L D N DG +
Sbjct: 107 KTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLEL 166
Query: 198 EDFSRMMELQ 207
+ +R++ +Q
Sbjct: 167 TEMARLLPVQ 176
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEV 126
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML E
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAMLKEA 52
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEV 126
E+ +A ++D D DG V + +++A+ +LG P +E+ +ML E
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGR-APDDKELTAMLKEA 63
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 29/142 (20%)
Query: 87 KLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDG------YIPLEALI 140
K L+ G + E + + TQ V++M D GD Y+ L+
Sbjct: 30 KFLEECPSGTLFMHEFKRFFKVPDNEEATQY-VEAMFRAFDTNGDNTIDFLEYVAALNLV 88
Query: 141 SR------LKETFDFFDADHDGKITAEELFGVFTKLG--DELCTLD---DCRG------- 182
R LK TF +D D +G I +EL + + + C+++ + +G
Sbjct: 89 LRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEE 148
Query: 183 ----MIALVDKNGDGFVCFEDF 200
+ LVD+NGDG + +F
Sbjct: 149 VVDRIFLLVDENGDGQLSLNEF 170
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 25/91 (27%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDE 173
++EE+ + D+ DGYI LE L L+ T E
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------------------------GE 36
Query: 174 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
T DD ++ DKN DG + +++F M
Sbjct: 37 TITEDDIEELMKDGDKNNDGRIDYDEFLEFM 67
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 25/91 (27%)
Query: 114 PTQEEVKSMLSEVDREGDGYIPLEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDE 173
++EE+ + D+ DGYI LE L L+ T E
Sbjct: 4 KSEEELSDLFRMFDKNADGYIDLEELKIMLQAT-------------------------GE 38
Query: 174 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
T DD ++ DKN DG + +++F M
Sbjct: 39 TITEDDIEELMKDGDKNNDGRIDYDEFLEFM 69
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 142 RLKETFDFFDADHDGKITAEELFGV----FTKLGDELCTLDDCRGMIALVDKNGDGFVCF 197
LK F+ +D + DG+++ EEL + F L + TLD+ + +DKNGDG V F
Sbjct: 6 ELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDE---LFEELDKNGDGEVSF 62
Query: 198 EDFSRMM 204
E+F ++
Sbjct: 63 EEFQVLV 69
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 117 EEVKSMLSEVDREGD-------GYIPLEALISR-LKETFDFFDADHDGKITAEELFGVFT 168
+++K L V EG + L+A+ + +K+ F DAD G I EEL V
Sbjct: 10 DDIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLK 69
Query: 169 KLGDELCTLDDC--RGMIALVDKNGDGFVCFEDFSRMM 204
+ L D + + DK+GDG + ++F ++
Sbjct: 70 SFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLV 107
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 94 DGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALI 140
DG + EL + LG +P T EE++ + EVD +G G + + +
Sbjct: 33 DGCISTKELGKVXRXLGQNP-TPEELQEXIDEVDEDGSGTVDFDEFL 78
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 141 SRLKETFDFFDADHDGKITAEEL 163
+RL+ FD D + DG++TAEE+
Sbjct: 98 NRLRTFFDMVDKNADGRLTAEEV 120
>pdb|1EV9|A Chain A, Rat Glutathione S-Transferase A1-1 Mutant W21f With Gso3
Bound
pdb|1EV9|C Chain C, Rat Glutathione S-Transferase A1-1 Mutant W21f With Gso3
Bound
pdb|1EV9|D Chain D, Rat Glutathione S-Transferase A1-1 Mutant W21f With Gso3
Bound
Length = 221
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP 135
L+D ++G++ +L ++++L PP Q+E K+ L++ DR + Y+P
Sbjct: 90 LIDMYSEGIL---DLTEMIMQLVICPPDQKEAKTALAK-DRTKNRYLP 133
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 139 LISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCT 176
++R K F+F D + +GKIT +E + +K D++C
Sbjct: 21 WVNRHKFMFNFLDINGNGKITLDE---IVSKASDDICA 55
>pdb|1EV4|A Chain A, Rat Glutathione S-transferase A1-1: Mutant W21f/f220y With
Gso3 Bound
pdb|1EV4|C Chain C, Rat Glutathione S-transferase A1-1: Mutant W21f/f220y With
Gso3 Bound
pdb|1EV4|D Chain D, Rat Glutathione S-transferase A1-1: Mutant W21f/f220y With
Gso3 Bound
Length = 221
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 88 LLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIP 135
L+D ++G++ +L ++++L PP Q+E K+ L++ DR + Y+P
Sbjct: 90 LIDMYSEGIL---DLTEMIMQLVICPPDQKEAKTALAK-DRTKNRYLP 133
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 140 ISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFED 199
I L+E F FD D DG I +L +G + T + + ++ N G V F+D
Sbjct: 9 IEELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMNLGGHVDFDD 67
Query: 200 FSRMM 204
F +M
Sbjct: 68 FVELM 72
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 143 LKETFDFFDADHDGKITAEELFGVFTKLGDELCTLD--DCRGMIALVDKNGDGFVCFEDF 200
+K+ F D D G I +EL + + L + + ++A DK+GDG + E+F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 201 SRMM 204
S ++
Sbjct: 103 STLV 106
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 174 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+ TLD+ + +DKNGDG V FE+F ++
Sbjct: 43 MSTLDE---LFEELDKNGDGEVSFEEFQVLV 70
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 167 FTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
F L + TLD+ + +DKNGDG V FE+F ++
Sbjct: 40 FPSLLKGMSTLDE---LFEELDKNGDGEVSFEEFQVLV 74
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 145 ETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 202
E F FD + G I+ EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 167 FTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
F L + TLD+ + +DKNGDG V FE+F ++
Sbjct: 36 FPSLLKGMSTLDE---LFEELDKNGDGEVSFEEFQVLV 70
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 145 ETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 202
E F FD + G I+ EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 145 ETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 202
E F FD + G I+ EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 167 FTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
F L + TLD+ + +DKNGDG V FE+F ++
Sbjct: 37 FPSLLKGMSTLDE---LFEELDKNGDGEVSFEEFQVLV 71
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 174 LCTLDDCRGMIALVDKNGDGFVCFEDFSRMM 204
+ TLD+ + +DKNGDG V FE+F ++
Sbjct: 44 MSTLDE---LFEELDKNGDGEVSFEEFQVLV 71
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 145 ETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 202
E F FD + G I+ EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 86 EAFKTFDREGQGFISGAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 144
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GF 194
+ + E F FD + G I+ EL V T LG+ L +D +I L D D G
Sbjct: 77 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGN 135
Query: 195 VCFEDFSR 202
V +EDF +
Sbjct: 136 VKYEDFVK 143
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 136 LEALISRLKETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFV 195
+E +S L + F ITAE L LG E + +D +GM+ D +GDG +
Sbjct: 35 VEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGAL 94
Query: 196 CFEDFSRMM 204
+F +M
Sbjct: 95 NQTEFCVLM 103
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 81 ELVQACKLLDRDNDGVVLRSELEALLIRLGADPP-----TQEEVKSMLSEVDREGDGYIP 135
EL A K LD + DG V EL+ ++ L A +E ++ D+ DG I
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 136 LEALIS 141
E ++
Sbjct: 68 KEEFLN 73
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 141 SRLKETFDFFDADHDGKITAEELFGVFTKL-GDELCTLDDCR----GMIALVDKNGDGFV 195
+ L+ F DA+ DG +TA EL L + + D + +I + DKN DG +
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 196 CFEDF 200
E+F
Sbjct: 67 SKEEF 71
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 82 LVQACKLLDRDNDGVVLRSELEALLIRLGADPPTQEEVKSMLSEVDREGDGYIPLEALIS 141
L + K++D DN G + EL+ L R+G++ + E+K ++ D + G I I+
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSE-LMESEIKDLMDAADIDKSGTIDYGEFIA 83
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 137 EALISRLKETFDFFDADHDGKITAEELFGVFTKLGDEL 174
E I LKE F D D+ G IT +EL ++G EL
Sbjct: 19 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 56
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 145 ETFDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGD--GFVCFEDFSR 202
E F FD + G I+ EL V T LG+ L +D +I L D D G V +EDF +
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSD-EDVDEIIKLTDLQEDLEGNVKYEDFVK 143
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 139 LISRLKETFDFFDADHDGKITAEELFGVFTKLGDELC 175
I R K FD+ D + +G+IT +E + +K D++C
Sbjct: 18 WIKRHKFMFDYLDINGNGQITLDE---IVSKASDDIC 51
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 147 FDFFDADHDGKITAEELFGVFTKLGDELCTLDDCRGMIALVDKNGDGFVCFEDFS 201
FD DA + + EE KL ++D + +DKNG G V F++F+
Sbjct: 136 FDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFA 190
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,515,176
Number of Sequences: 62578
Number of extensions: 212337
Number of successful extensions: 1793
Number of sequences better than 100.0: 286
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 731
Number of HSP's gapped (non-prelim): 601
length of query: 208
length of database: 14,973,337
effective HSP length: 94
effective length of query: 114
effective length of database: 9,091,005
effective search space: 1036374570
effective search space used: 1036374570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)