Query 028517
Match_columns 208
No_of_seqs 143 out of 2325
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 12:45:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028517.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028517hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02791 ankyrin-like protein; 100.0 8.6E-38 1.9E-42 229.5 20.0 195 3-206 23-220 (284)
2 KOG4412 26S proteasome regulat 100.0 7.3E-38 1.6E-42 206.1 12.2 186 15-203 8-195 (226)
3 KOG4412 26S proteasome regulat 100.0 8.9E-38 1.9E-42 205.7 12.4 178 8-190 36-214 (226)
4 PHA02875 ankyrin repeat protei 100.0 1E-36 2.2E-41 237.9 20.7 201 2-206 27-228 (413)
5 PHA02875 ankyrin repeat protei 100.0 1.1E-35 2.4E-40 232.1 20.1 192 10-206 2-194 (413)
6 PHA03100 ankyrin repeat protei 100.0 5.9E-36 1.3E-40 237.8 18.9 200 2-206 98-309 (480)
7 PHA02874 ankyrin repeat protei 100.0 8.4E-35 1.8E-39 228.2 20.9 184 3-188 28-231 (434)
8 PHA03100 ankyrin repeat protei 100.0 1.8E-34 3.8E-39 229.4 19.0 199 2-205 60-275 (480)
9 PHA02878 ankyrin repeat protei 100.0 3E-34 6.5E-39 227.5 20.1 196 7-206 34-293 (477)
10 KOG0509 Ankyrin repeat and DHH 100.0 1.5E-34 3.2E-39 222.6 16.7 191 8-203 42-234 (600)
11 PHA02874 ankyrin repeat protei 100.0 8.3E-34 1.8E-38 222.7 20.5 190 12-205 3-215 (434)
12 PHA02946 ankyin-like protein; 100.0 9.3E-34 2E-38 221.6 19.5 197 2-204 64-267 (446)
13 PHA02791 ankyrin-like protein; 100.0 9.3E-34 2E-38 208.2 18.0 183 8-204 59-244 (284)
14 PHA02859 ankyrin repeat protei 100.0 1.1E-32 2.4E-37 195.7 20.3 177 7-191 18-203 (209)
15 PHA03095 ankyrin-like protein; 100.0 6.5E-33 1.4E-37 220.0 19.4 199 2-205 75-315 (471)
16 PHA02878 ankyrin repeat protei 100.0 1.2E-32 2.5E-37 218.5 20.1 196 2-202 62-323 (477)
17 PHA02798 ankyrin-like protein; 100.0 5.5E-33 1.2E-37 220.8 17.8 200 2-206 63-317 (489)
18 PHA03095 ankyrin-like protein; 100.0 1.6E-32 3.5E-37 217.7 19.8 200 2-206 39-283 (471)
19 PHA02716 CPXV016; CPX019; EVM0 100.0 3.3E-32 7.2E-37 220.2 18.7 198 2-204 168-427 (764)
20 PHA02989 ankyrin repeat protei 100.0 5.4E-32 1.2E-36 215.4 18.4 199 2-206 100-315 (494)
21 PHA02876 ankyrin repeat protei 100.0 1.4E-31 3E-36 220.4 20.7 202 2-205 170-400 (682)
22 KOG0508 Ankyrin repeat protein 100.0 6.8E-33 1.5E-37 206.7 11.1 190 7-201 39-236 (615)
23 PHA02876 ankyrin repeat protei 100.0 1.5E-31 3.3E-36 220.2 20.2 200 2-206 265-469 (682)
24 PHA02716 CPXV016; CPX019; EVM0 100.0 1.5E-31 3.2E-36 216.5 18.2 200 2-206 239-566 (764)
25 PHA02946 ankyin-like protein; 100.0 8.2E-31 1.8E-35 205.0 19.7 185 11-201 38-231 (446)
26 PHA02795 ankyrin-like protein; 100.0 1.1E-30 2.4E-35 199.2 16.5 186 16-208 83-290 (437)
27 KOG0509 Ankyrin repeat and DHH 100.0 4.7E-31 1E-35 203.3 14.5 184 2-190 70-255 (600)
28 KOG0510 Ankyrin repeat protein 100.0 9.9E-31 2.2E-35 206.0 14.9 200 7-206 184-403 (929)
29 PHA02989 ankyrin repeat protei 100.0 1E-29 2.2E-34 202.3 19.1 198 2-206 28-282 (494)
30 PHA02917 ankyrin-like protein; 100.0 1.3E-29 2.8E-34 205.5 19.0 191 4-201 26-252 (661)
31 KOG0510 Ankyrin repeat protein 100.0 7.1E-30 1.5E-34 201.2 14.8 203 1-205 145-366 (929)
32 PHA02798 ankyrin-like protein; 100.0 2.7E-29 5.9E-34 199.7 18.4 193 10-207 36-285 (489)
33 KOG0508 Ankyrin repeat protein 100.0 6.3E-30 1.4E-34 191.0 10.2 191 14-204 8-207 (615)
34 PHA02859 ankyrin repeat protei 100.0 1.6E-28 3.4E-33 174.4 16.1 158 43-206 19-185 (209)
35 PLN03192 Voltage-dependent pot 100.0 9.4E-28 2E-32 200.6 20.4 180 8-194 523-703 (823)
36 PHA02730 ankyrin-like protein; 100.0 1.5E-27 3.2E-32 190.2 16.2 194 5-201 36-258 (672)
37 KOG4177 Ankyrin [Cell wall/mem 100.0 1.5E-27 3.3E-32 197.4 14.3 199 3-205 433-631 (1143)
38 PHA02730 ankyrin-like protein; 99.9 2E-26 4.4E-31 183.8 15.9 200 2-207 227-525 (672)
39 PLN03192 Voltage-dependent pot 99.9 4.6E-26 1E-30 190.5 18.5 160 42-206 522-681 (823)
40 PHA02795 ankyrin-like protein; 99.9 1.3E-25 2.8E-30 171.7 17.6 167 5-177 111-292 (437)
41 PHA02917 ankyrin-like protein; 99.9 1.2E-25 2.7E-30 182.5 18.6 196 2-205 60-301 (661)
42 TIGR00870 trp transient-recept 99.9 2.3E-26 4.9E-31 191.2 13.8 195 2-202 44-279 (743)
43 PHA02792 ankyrin-like protein; 99.9 1.9E-25 4.1E-30 176.7 17.0 204 3-208 168-481 (631)
44 KOG0502 Integral membrane anky 99.9 8.8E-27 1.9E-31 158.6 5.7 191 10-208 96-286 (296)
45 KOG4177 Ankyrin [Cell wall/mem 99.9 9.6E-27 2.1E-31 192.7 6.8 198 6-208 403-601 (1143)
46 PHA02743 Viral ankyrin protein 99.9 1.5E-24 3.3E-29 148.7 15.2 142 38-182 13-163 (166)
47 KOG0507 CASK-interacting adapt 99.9 9.2E-25 2E-29 171.4 11.7 197 2-204 41-245 (854)
48 PHA02741 hypothetical protein; 99.9 3.2E-24 6.9E-29 147.7 11.9 134 37-170 13-155 (169)
49 PHA02743 Viral ankyrin protein 99.9 3.3E-24 7.1E-29 147.1 11.2 132 75-206 14-154 (166)
50 TIGR00870 trp transient-recept 99.9 6.1E-24 1.3E-28 176.7 14.7 177 8-191 15-219 (743)
51 PHA02792 ankyrin-like protein; 99.9 9.4E-24 2E-28 167.1 14.8 202 2-206 97-436 (631)
52 PHA02741 hypothetical protein; 99.9 3.3E-23 7.1E-28 142.7 14.6 130 74-203 14-155 (169)
53 KOG0514 Ankyrin repeat protein 99.9 3.3E-24 7.1E-29 155.9 9.6 181 21-204 237-431 (452)
54 PHA02884 ankyrin repeat protei 99.9 2.4E-23 5.3E-28 153.4 14.3 158 39-204 26-186 (300)
55 PHA02736 Viral ankyrin protein 99.9 2.1E-23 4.5E-28 141.8 12.1 138 37-174 9-153 (154)
56 KOG0502 Integral membrane anky 99.9 8.5E-25 1.8E-29 148.9 4.7 193 7-205 59-251 (296)
57 KOG0514 Ankyrin repeat protein 99.9 2.4E-23 5.2E-28 151.4 10.2 163 3-169 261-429 (452)
58 KOG0507 CASK-interacting adapt 99.9 3.2E-23 6.9E-28 162.9 10.0 195 10-207 3-216 (854)
59 PHA02736 Viral ankyrin protein 99.9 4.2E-23 9.1E-28 140.3 8.4 133 74-206 10-152 (154)
60 KOG0512 Fetal globin-inducing 99.9 4.4E-22 9.4E-27 131.0 12.2 144 47-192 65-210 (228)
61 PHA02884 ankyrin repeat protei 99.9 5.6E-22 1.2E-26 146.2 14.3 126 75-200 26-157 (300)
62 KOG0505 Myosin phosphatase, re 99.9 3.1E-22 6.8E-27 152.0 11.3 186 13-204 43-255 (527)
63 KOG3676 Ca2+-permeable cation 99.9 3.8E-21 8.3E-26 152.6 11.5 196 5-202 96-330 (782)
64 KOG0512 Fetal globin-inducing 99.9 2.9E-20 6.3E-25 122.5 12.8 145 11-159 64-210 (228)
65 cd00204 ANK ankyrin repeats; 99.8 4.8E-20 1E-24 120.6 13.5 122 79-200 5-126 (126)
66 PF12796 Ank_2: Ankyrin repeat 99.8 2.5E-20 5.4E-25 114.9 11.1 89 85-177 1-89 (89)
67 cd00204 ANK ankyrin repeats; 99.8 7.5E-19 1.6E-23 114.9 14.7 124 41-167 3-126 (126)
68 KOG0505 Myosin phosphatase, re 99.8 7.6E-20 1.7E-24 139.2 9.6 154 48-204 43-222 (527)
69 PF12796 Ank_2: Ankyrin repeat 99.8 5.9E-19 1.3E-23 108.8 10.6 88 49-143 1-88 (89)
70 KOG0195 Integrin-linked kinase 99.8 1.3E-19 2.7E-24 128.8 6.9 137 14-154 4-140 (448)
71 KOG0195 Integrin-linked kinase 99.8 9.6E-20 2.1E-24 129.4 5.5 115 74-188 27-141 (448)
72 KOG3676 Ca2+-permeable cation 99.8 4.1E-18 8.9E-23 135.6 14.8 168 2-169 135-330 (782)
73 KOG4369 RTK signaling protein 99.8 5.4E-19 1.2E-23 144.5 7.7 198 6-207 786-986 (2131)
74 KOG4369 RTK signaling protein 99.7 1.6E-18 3.6E-23 141.8 5.6 192 9-204 756-950 (2131)
75 KOG4214 Myotrophin and similar 99.7 2.2E-17 4.7E-22 97.6 8.1 104 84-188 5-108 (117)
76 KOG4214 Myotrophin and similar 99.7 4E-17 8.7E-22 96.5 6.8 104 11-120 3-106 (117)
77 COG0666 Arp FOG: Ankyrin repea 99.7 8.5E-16 1.8E-20 110.6 15.2 129 74-202 66-202 (235)
78 COG0666 Arp FOG: Ankyrin repea 99.7 7.5E-15 1.6E-19 105.6 15.2 128 40-170 68-203 (235)
79 PF13857 Ank_5: Ankyrin repeat 99.6 5.1E-16 1.1E-20 86.6 4.7 55 133-187 1-56 (56)
80 PTZ00322 6-phosphofructo-2-kin 99.6 8.6E-15 1.9E-19 120.2 12.1 105 84-188 85-196 (664)
81 PF13637 Ank_4: Ankyrin repeat 99.6 1.1E-15 2.3E-20 84.8 3.6 53 147-199 1-53 (54)
82 KOG1710 MYND Zn-finger and ank 99.6 1.2E-13 2.5E-18 98.6 11.8 123 9-135 11-133 (396)
83 PF13637 Ank_4: Ankyrin repeat 99.5 2.4E-14 5.3E-19 79.3 6.4 54 114-167 1-54 (54)
84 PTZ00322 6-phosphofructo-2-kin 99.5 1.1E-13 2.3E-18 113.8 11.9 104 48-154 85-195 (664)
85 KOG0515 p53-interacting protei 99.5 1.3E-13 2.8E-18 105.7 9.5 117 49-168 554-673 (752)
86 PF13857 Ank_5: Ankyrin repeat 99.5 3.3E-14 7.1E-19 79.2 4.7 55 100-154 1-56 (56)
87 KOG1710 MYND Zn-finger and ank 99.5 2.7E-13 5.8E-18 96.8 9.2 123 44-169 11-134 (396)
88 KOG0515 p53-interacting protei 99.4 4.5E-13 9.7E-18 102.7 8.6 101 87-187 556-657 (752)
89 KOG0783 Uncharacterized conser 99.1 8.2E-11 1.8E-15 95.0 3.2 81 109-189 47-128 (1267)
90 KOG0782 Predicted diacylglycer 99.1 1.1E-09 2.3E-14 85.4 8.6 121 13-136 869-989 (1004)
91 KOG0783 Uncharacterized conser 99.0 3.3E-10 7.2E-15 91.6 6.0 108 14-123 21-128 (1267)
92 PF13606 Ank_3: Ankyrin repeat 99.0 7.9E-10 1.7E-14 52.8 4.0 29 146-174 1-29 (30)
93 KOG0818 GTPase-activating prot 99.0 1.7E-09 3.8E-14 82.8 6.9 85 117-201 136-221 (669)
94 KOG0506 Glutaminase (contains 99.0 8.6E-10 1.9E-14 84.0 5.1 121 13-138 472-597 (622)
95 KOG0782 Predicted diacylglycer 98.9 2.9E-09 6.3E-14 83.1 7.2 119 88-206 873-993 (1004)
96 KOG0818 GTPase-activating prot 98.9 8.7E-09 1.9E-13 79.0 9.3 85 84-168 136-221 (669)
97 KOG0506 Glutaminase (contains 98.9 1.9E-09 4E-14 82.2 5.4 93 78-170 503-596 (622)
98 PF00023 Ank: Ankyrin repeat H 98.9 4.5E-09 9.7E-14 51.6 4.4 32 146-177 1-32 (33)
99 PF13606 Ank_3: Ankyrin repeat 98.8 9.6E-09 2.1E-13 49.1 3.8 24 82-105 3-26 (30)
100 KOG3609 Receptor-activated Ca2 98.8 4.8E-08 1E-12 79.6 9.9 88 8-105 23-112 (822)
101 KOG0705 GTPase-activating prot 98.8 3.8E-08 8.2E-13 77.0 8.1 90 49-138 628-718 (749)
102 PF00023 Ank: Ankyrin repeat H 98.8 2E-08 4.4E-13 49.2 4.4 30 81-110 2-31 (33)
103 KOG0522 Ankyrin repeat protein 98.7 1.6E-08 3.6E-13 78.2 4.8 86 84-169 23-110 (560)
104 KOG0705 GTPase-activating prot 98.7 5.9E-08 1.3E-12 75.9 7.3 93 12-107 626-720 (749)
105 KOG0522 Ankyrin repeat protein 98.6 1.7E-07 3.7E-12 72.7 7.5 89 12-103 22-110 (560)
106 KOG0521 Putative GTPase activa 98.4 2.1E-07 4.6E-12 77.4 4.2 89 113-201 655-743 (785)
107 KOG0511 Ankyrin repeat protein 98.4 2.1E-06 4.6E-11 64.3 8.1 73 46-121 37-109 (516)
108 KOG3609 Receptor-activated Ca2 98.3 2.1E-06 4.5E-11 70.4 7.7 143 43-192 23-176 (822)
109 KOG2384 Major histocompatibili 98.3 5.3E-07 1.1E-11 61.2 3.1 69 104-172 2-71 (223)
110 KOG0511 Ankyrin repeat protein 98.3 4.4E-06 9.6E-11 62.7 7.4 70 82-151 37-106 (516)
111 KOG0520 Uncharacterized conser 98.2 1.9E-06 4.2E-11 72.0 4.3 127 75-202 568-702 (975)
112 KOG2384 Major histocompatibili 98.1 1.6E-05 3.4E-10 54.2 7.1 68 74-141 5-73 (223)
113 KOG0521 Putative GTPase activa 98.1 4.8E-06 1E-10 69.6 5.1 87 80-166 655-741 (785)
114 KOG0520 Uncharacterized conser 98.1 1.2E-05 2.6E-10 67.5 7.2 130 36-169 565-702 (975)
115 PF03158 DUF249: Multigene fam 97.4 0.0031 6.8E-08 43.1 9.2 140 45-201 46-191 (192)
116 KOG2505 Ankyrin repeat protein 97.3 0.00061 1.3E-08 53.3 5.9 66 123-188 400-471 (591)
117 smart00248 ANK ankyrin repeats 97.3 0.00062 1.3E-08 31.1 3.9 27 147-173 2-28 (30)
118 PF03158 DUF249: Multigene fam 97.3 0.0027 5.8E-08 43.4 8.0 137 13-168 49-191 (192)
119 smart00248 ANK ankyrin repeats 97.1 0.0012 2.7E-08 30.0 3.9 19 47-65 4-22 (30)
120 KOG2505 Ankyrin repeat protein 97.0 0.0025 5.3E-08 50.0 5.9 62 94-155 404-471 (591)
121 PF06128 Shigella_OspC: Shigel 96.7 0.025 5.4E-07 40.2 8.7 45 127-171 230-278 (284)
122 PF06128 Shigella_OspC: Shigel 95.6 0.12 2.5E-06 37.0 7.6 118 12-139 155-279 (284)
123 PF11929 DUF3447: Domain of un 94.7 0.12 2.5E-06 30.4 4.8 47 11-66 7-53 (76)
124 PF11929 DUF3447: Domain of un 94.4 0.093 2E-06 30.8 4.0 45 85-136 10-54 (76)
125 cd07920 Pumilio Pumilio-family 76.7 24 0.00051 26.9 8.0 54 11-64 22-76 (322)
126 KOG1709 Guanidinoacetate methy 68.6 4.9 0.00011 28.9 2.3 39 101-139 2-40 (271)
127 PF04053 Coatomer_WDAD: Coatom 66.2 11 0.00025 30.4 4.3 140 12-170 266-429 (443)
128 PF04053 Coatomer_WDAD: Coatom 59.5 32 0.00069 27.9 5.6 104 82-200 322-426 (443)
129 cd07920 Pumilio Pumilio-family 51.7 1.1E+02 0.0023 23.4 10.2 94 9-102 56-150 (322)
130 PF08898 DUF1843: Domain of un 36.9 67 0.0015 17.4 2.9 22 12-33 5-26 (53)
131 KOG4591 Uncharacterized conser 35.8 32 0.00069 24.5 2.0 47 144-190 219-270 (280)
132 PLN03081 pentatricopeptide (PP 32.0 3.4E+02 0.0074 23.5 10.5 182 12-202 330-519 (697)
133 PLN03218 maturation of RBCL 1; 29.1 1.4E+02 0.0031 27.5 5.3 17 15-31 587-603 (1060)
134 PF12645 HTH_16: Helix-turn-he 27.4 1.2E+02 0.0026 17.1 3.1 21 13-33 2-22 (65)
135 KOG3836 HLH transcription fact 27.3 16 0.00035 30.4 -0.6 46 124-169 406-451 (605)
136 KOG1709 Guanidinoacetate methy 27.1 66 0.0014 23.5 2.4 33 75-107 9-41 (271)
137 KOG0513 Ca2+-independent phosp 22.8 21 0.00046 29.4 -0.7 22 43-64 53-74 (503)
138 COG1732 OpuBC Periplasmic glyc 21.6 1.4E+02 0.003 22.9 3.3 36 128-163 50-87 (300)
139 KOG0292 Vesicle coat complex C 21.5 4.1E+02 0.0088 24.2 6.3 21 12-32 598-618 (1202)
140 PF14097 SpoVAE: Stage V sporu 21.0 1.7E+02 0.0036 20.4 3.3 46 159-204 40-94 (180)
141 PF04840 Vps16_C: Vps16, C-ter 20.9 1.5E+02 0.0034 22.9 3.6 51 15-65 8-62 (319)
142 PLN03218 maturation of RBCL 1; 20.0 7.3E+02 0.016 23.2 9.7 14 17-30 482-495 (1060)
No 1
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=8.6e-38 Score=229.51 Aligned_cols=195 Identities=17% Similarity=0.141 Sum_probs=174.9
Q ss_pred cccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCC
Q 028517 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (208)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (208)
.+..|..+++|||+|+..|+.++++.|++.+. +.+.. .+.||||+|+..|+.+++++|+..+.+ ++..+..|.
T Consensus 23 a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga--~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gad---vn~~d~~G~ 95 (284)
T PHA02791 23 AFKADVHGHSALYYAIADNNVRLVCTLLNAGA--LKNLL--ENEFPLHQAATLEDTKIVKILLFSGMD---DSQFDDKGN 95 (284)
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcC--CCcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCC
Confidence 45678899999999999999999999998763 33333 478999999999999999999998876 567788999
Q ss_pred cHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCc-hHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHhhCCH
Q 028517 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGR-TALHYAASKGWLKIVELLISRGAKINSKD-KVGCTALHRGASTGNS 160 (208)
Q Consensus 83 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~A~~~~~~ 160 (208)
||||.|+..|+.+++++|+++|++++.++..|+ ||+|+|+..|+.+++++|++++.+. .+ ..|.||||.|+..|+.
T Consensus 96 TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~ 173 (284)
T PHA02791 96 TALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHV 173 (284)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCH
Confidence 999999999999999999999999998888875 8999999999999999999987543 23 3589999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCH-HHHHHHhCCcccccccccccccc
Q 028517 161 ALCELLIEEGAEVDATDKAGQTP-LMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 161 ~~~~~Ll~~~~~~~~~~~~g~t~-l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
+++++|+++|++++.++..|.|| ||+|+..|+.+++++|+++++..
T Consensus 174 eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~i 220 (284)
T PHA02791 174 DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINI 220 (284)
T ss_pred HHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999999999987 99999999999999999988754
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.3e-38 Score=206.08 Aligned_cols=186 Identities=42% Similarity=0.592 Sum_probs=88.0
Q ss_pred HHHHHcCChHHHHHHHHHhhhhhccCCCC-CCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCC
Q 028517 15 FKAAETGDSSTFKSLSKQQLLKSLSLRND-DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGN 93 (208)
Q Consensus 15 ~~a~~~g~~~~~~~l~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 93 (208)
+.+++.....-++.+++..+ .+++.+++ +|+||||.||..|+.+++.+|++. ... .++.+|..|+||||.|++.|+
T Consensus 8 ~~~~~~~~~~kveel~~s~~-kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq-~nv-~~ddkDdaGWtPlhia~s~g~ 84 (226)
T KOG4412|consen 8 KAICENCEEFKVEELIQSDP-KSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQ-PNV-KPDDKDDAGWTPLHIAASNGN 84 (226)
T ss_pred HHHHhhchHHHHHHHHhcCh-hhhhccccccCCceeeeeeecCchhHHHHHHhc-CCC-CCCCccccCCchhhhhhhcCc
Confidence 33444444444444444332 22333332 455555555555555555555431 111 133334445555555555555
Q ss_pred HHHHHHHHhC-CCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCC
Q 028517 94 VTIVEMLLSK-GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 172 (208)
Q Consensus 94 ~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~ 172 (208)
.++++-|+.+ |++++..+..|.|+||+|+..|+.++.++|+++|+.++.+|..|.||||.|+..|.+.++++|+..|+.
T Consensus 85 ~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~ 164 (226)
T KOG4412|consen 85 DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAP 164 (226)
T ss_pred HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCC
Confidence 5555555544 455555455555555555555555555555555555545555555555555555555555555555555
Q ss_pred CCCCCCCCCCHHHHHHHhCCccccccccccc
Q 028517 173 VDATDKAGQTPLMNAVICYNKEFSGCSSSNK 203 (208)
Q Consensus 173 ~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~ 203 (208)
++..|.+|+||||.|.-.|++++...|++.+
T Consensus 165 ~n~qDk~G~TpL~~al~e~~~d~a~lLV~~g 195 (226)
T KOG4412|consen 165 LNTQDKYGFTPLHHALAEGHPDVAVLLVRAG 195 (226)
T ss_pred CCcccccCccHHHHHHhccCchHHHHHHHhc
Confidence 5555555555555554444444444444443
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.9e-38 Score=205.69 Aligned_cols=178 Identities=38% Similarity=0.477 Sum_probs=166.1
Q ss_pred ccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhc-ccccccccccCCCCCcHHH
Q 028517 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSV-DESANVVNAVDEEGWAPIH 86 (208)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~~~~~~~~l~ 86 (208)
.++++|||.|++.|..+++.+|+.+. .-.++.+|+.|+||||.||..|+.++++.|+.. +++ ++..+..|.|+||
T Consensus 36 qD~Rt~LHwa~S~g~~eiv~fLlsq~-nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad---vna~tn~G~T~LH 111 (226)
T KOG4412|consen 36 QDGRTPLHWACSFGHVEIVYFLLSQP-NVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD---VNATTNGGQTCLH 111 (226)
T ss_pred ccCCceeeeeeecCchhHHHHHHhcC-CCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC---cceecCCCcceeh
Confidence 38999999999999999999999744 567777899999999999999999999999986 444 7888899999999
Q ss_pred HHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 028517 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (208)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 166 (208)
+|+..|..+++++|+++|+.++.+|..|.||+|-|+.-|.++++++|+..|+.+|.+|+.|+||||.|.-.|+.++...|
T Consensus 112 yAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lL 191 (226)
T KOG4412|consen 112 YAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLL 191 (226)
T ss_pred hhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHh
Q 028517 167 IEEGAEVDATDKAGQTPLMNAVIC 190 (208)
Q Consensus 167 l~~~~~~~~~~~~g~t~l~~A~~~ 190 (208)
.++|++.+..|++| ||+-.|+-.
T Consensus 192 V~~gAd~~~edke~-t~~~~a~~~ 214 (226)
T KOG4412|consen 192 VRAGADTDREDKEG-TALRIACNE 214 (226)
T ss_pred HHhccceeeccccC-chHHHHHHH
Confidence 99999999999988 998887653
No 4
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1e-36 Score=237.92 Aligned_cols=201 Identities=26% Similarity=0.341 Sum_probs=176.8
Q ss_pred CcccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCC
Q 028517 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (208)
+++..+..+.+|||.|++.|+.+++++|++.+ .++...+..+.||||.|+..|+.+++++|++.+... ....+..|
T Consensus 27 ~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g--a~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g 102 (413)
T PHA02875 27 NPNFEIYDGISPIKLAMKFRDSEAIKLLMKHG--AIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFA--DDVFYKDG 102 (413)
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcc--cccccCCC
Confidence 45566677899999999999999999998876 355556677889999999999999999999877643 23445678
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHH
Q 028517 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA 161 (208)
Q Consensus 82 ~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~ 161 (208)
.||||.|+..|+.+++++|+++|++++.++..|.||+|+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~e 182 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIA 182 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCC-CHHHHHHHhCCcccccccccccccc
Q 028517 162 LCELLIEEGAEVDATDKAGQ-TPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 162 ~~~~Ll~~~~~~~~~~~~g~-t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
++++|+++|++++..+..|. ||+++|+..++.+++++|+++++..
T Consensus 183 iv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~ 228 (413)
T PHA02875 183 ICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADC 228 (413)
T ss_pred HHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCc
Confidence 99999999999999988775 7888899999999999999988754
No 5
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=232.15 Aligned_cols=192 Identities=23% Similarity=0.229 Sum_probs=177.0
Q ss_pred CcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHH
Q 028517 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAA 89 (208)
Q Consensus 10 ~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~ 89 (208)
.+++|+.|++.|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.|.. .+..+..+.||||.|+
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g--~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~~~t~L~~A~ 76 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIG--INPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAI---PDVKYPDIESELHDAV 76 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---ccccCCCcccHHHHHH
Confidence 478999999999999999999876 57777788999999999999999999999998876 4455667899999999
Q ss_pred hcCCHHHHHHHHhCCCCCC-CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHH
Q 028517 90 SIGNVTIVEMLLSKGADVN-LKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIE 168 (208)
Q Consensus 90 ~~~~~~~~~~Ll~~~~~~~-~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~ 168 (208)
..|+.+++++|++.|.... ..+..|.||+|+|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++
T Consensus 77 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~ 156 (413)
T PHA02875 77 EEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLID 156 (413)
T ss_pred HCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999987654 446689999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCHHHHHHHhCCcccccccccccccc
Q 028517 169 EGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 169 ~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
+|++++.++..|.||||+|+..|+.+++++|+++++..
T Consensus 157 ~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~ 194 (413)
T PHA02875 157 HKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI 194 (413)
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999987654
No 6
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5.9e-36 Score=237.84 Aligned_cols=200 Identities=28% Similarity=0.413 Sum_probs=177.2
Q ss_pred CcccccccCcHHHHHHH--HcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC--CHHHHHHHHhccccccccccc
Q 028517 2 DMDIDQTIKDKDLFKAA--ETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG--HPEVVEILLSVDESANVVNAV 77 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~--~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~ll~~~~~~~~~~~~ 77 (208)
+++..+..+.+||+.|+ ..|+.+++++|++.+ .++...+..|.||||+|+..| +.+++++|++.|.+ ++..
T Consensus 98 ~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d---in~~ 172 (480)
T PHA03100 98 NVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNG--ANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVD---INAK 172 (480)
T ss_pred CCCCCCCCCCchhhHHHhcccChHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCC---cccc
Confidence 45667778899999999 999999999998866 467777888999999999999 89999999988876 5666
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCC------chHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCc
Q 028517 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGG------RTALHYAASKGW--LKIVELLISRGAKINSKDKVGCT 149 (208)
Q Consensus 78 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~------~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~t 149 (208)
+..|.||||.|+..|+.+++++|+++|++++..+..+ .||+|.|+..++ .+++++|+++|++++.+|..|.|
T Consensus 173 d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~T 252 (480)
T PHA03100 173 NRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFT 252 (480)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCC
Confidence 7789999999999999999999999999988888877 889999999998 99999999999999999999999
Q ss_pred HHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccccccc
Q 028517 150 ALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 150 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
|||.|+..|+.+++++|+++|++++.++..|.||+++|+..++.+++++|+++++..
T Consensus 253 pL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i 309 (480)
T PHA03100 253 PLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSI 309 (480)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCH
Confidence 999999999999999999999999999999999999999999999999999888753
No 7
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=8.4e-35 Score=228.25 Aligned_cols=184 Identities=29% Similarity=0.434 Sum_probs=149.7
Q ss_pred cccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccc----------
Q 028517 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESAN---------- 72 (208)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~---------- 72 (208)
++..+..+.+||+.|++.|+.+++++|++.+ .+++..+..|.||||.|+..|+.+++++|++.|.+..
T Consensus 28 ~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~G--a~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~ 105 (434)
T PHA02874 28 INISVDETTTPLIDAIRSGDAKIVELFIKHG--ADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKD 105 (434)
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHH
Confidence 4556667889999999999999999998766 4666677888899999999999999999988765432
Q ss_pred ----------cccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 028517 73 ----------VVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINS 142 (208)
Q Consensus 73 ----------~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 142 (208)
.++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||+|+|+..++.+++++|+++|++++.
T Consensus 106 ~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~ 185 (434)
T PHA02874 106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV 185 (434)
T ss_pred HHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC
Confidence 1344567788999999999999999999999999988888999999999999999999999999998888
Q ss_pred CCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 028517 143 KDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAV 188 (208)
Q Consensus 143 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 188 (208)
.+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 186 ~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~ 231 (434)
T PHA02874 186 KDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAI 231 (434)
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHH
Confidence 8888999999999999999999999888765554444444444333
No 8
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=229.42 Aligned_cols=199 Identities=27% Similarity=0.318 Sum_probs=162.8
Q ss_pred CcccccccCcHHHHH-----HHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHH--hcCCHHHHHHHHhcccccccc
Q 028517 2 DMDIDQTIKDKDLFK-----AAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAA--SCGHPEVVEILLSVDESANVV 74 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~-----a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~--~~g~~~~~~~ll~~~~~~~~~ 74 (208)
+++..+..+.++++. |+..|+.++++.|++.+ .+++..+..|.||||+|+ ..|+.+++++|++.|.+ +
T Consensus 60 ~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~g--a~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~---~ 134 (480)
T PHA03100 60 DINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG--ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN---V 134 (480)
T ss_pred CCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCC--CCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCC---C
Confidence 345556667777777 77888888887777655 355667777888888888 88888888888877765 4
Q ss_pred cccCCCCCcHHHHHHhcC--CHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-----
Q 028517 75 NAVDEEGWAPIHSAASIG--NVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVG----- 147 (208)
Q Consensus 75 ~~~~~~~~~~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~----- 147 (208)
+..+..|.||||.|+..+ +.+++++|+++|++++.++..|.||+|+|+..|+.+++++|+++|++++..+..+
T Consensus 135 ~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 214 (480)
T PHA03100 135 NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTI 214 (480)
T ss_pred CccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHH
Confidence 566778888888888888 8888888888888888888888888888888888888888888888888777777
Q ss_pred -CcHHHHHHhhCC--HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccccccc
Q 028517 148 -CTALHRGASTGN--SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTW 205 (208)
Q Consensus 148 -~t~l~~A~~~~~--~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~ 205 (208)
.||+|.|+..++ .+++++|+++|++++.++..|.||||+|+..|+.+++++|++.++.
T Consensus 215 ~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad 275 (480)
T PHA03100 215 FETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGAN 275 (480)
T ss_pred HHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 788888888888 8888999988999999999999999999999999999999988764
No 9
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3e-34 Score=227.53 Aligned_cols=196 Identities=24% Similarity=0.279 Sum_probs=147.7
Q ss_pred cccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhccccc---------------
Q 028517 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESA--------------- 71 (208)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~--------------- 71 (208)
...+.+|||.|++.|+.++|++|++.+ .+++..+..|.||||+||..|+.+++++|++.+...
T Consensus 34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~g--advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~ 111 (477)
T PHA02878 34 SLIPFIPLHQAVEARNLDVVKSLLTRG--HNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNN 111 (477)
T ss_pred cccCcchHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHc
Confidence 345678899999999999999998765 577778888999999999887776666555421110
Q ss_pred ----------------------------------------------ccccccCCC-CCcHHHHHHhcCCHHHHHHHHhCC
Q 028517 72 ----------------------------------------------NVVNAVDEE-GWAPIHSAASIGNVTIVEMLLSKG 104 (208)
Q Consensus 72 ----------------------------------------------~~~~~~~~~-~~~~l~~a~~~~~~~~~~~Ll~~~ 104 (208)
..++..+.. |.||||.|+..|+.+++++|+++|
T Consensus 112 ~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g 191 (477)
T PHA02878 112 RNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYG 191 (477)
T ss_pred CCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCC
Confidence 002333444 788888888888888888888888
Q ss_pred CCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhh-CCHHHHHHHHHcCCCCCCCCC-CCCC
Q 028517 105 ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAST-GNSALCELLIEEGAEVDATDK-AGQT 182 (208)
Q Consensus 105 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~-~~~~~~~~Ll~~~~~~~~~~~-~g~t 182 (208)
++++.++..|.||+|.|+..++.+++++|+++|++++..+..|.||||+|+.. ++.+++++|+++|++++..+. .|.|
T Consensus 192 ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~T 271 (477)
T PHA02878 192 ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLT 271 (477)
T ss_pred CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCC
Confidence 88888888888888888888888888888888888888888888888888764 577888888888888877765 6788
Q ss_pred HHHHHHHhCCcccccccccccccc
Q 028517 183 PLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 183 ~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
|||+| .++.+++++|+++++..
T Consensus 272 pLh~A--~~~~~~v~~Ll~~gadi 293 (477)
T PHA02878 272 ALHSS--IKSERKLKLLLEYGADI 293 (477)
T ss_pred HHHHH--ccCHHHHHHHHHCCCCC
Confidence 88888 46677778777776543
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=1.5e-34 Score=222.58 Aligned_cols=191 Identities=34% Similarity=0.416 Sum_probs=177.1
Q ss_pred ccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccC-CCCCcHHH
Q 028517 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVD-EEGWAPIH 86 (208)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~-~~~~~~l~ 86 (208)
......++.|++.|+++.++.+++.. +.+.+..|..|.|+||.|+.+++++++++|++++++ ++... .-+.||||
T Consensus 42 d~~~~~~v~A~q~G~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gad---vn~~gG~l~stPLH 117 (600)
T KOG0509|consen 42 DSSLDDIVKATQYGELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGAD---VNAIGGVLGSTPLH 117 (600)
T ss_pred chhhhhhhhHhhcchHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCC---ccccCCCCCCCcch
Confidence 34467899999999999999999985 678888899999999999999999999999999988 44444 56789999
Q ss_pred HHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 028517 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (208)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 166 (208)
+|+++|++.++++|+++|++++.+|.+|.+|+|.|++.++...+-+++.++++++.+|.+|.|||++|+..|....++.|
T Consensus 118 WAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~L 197 (600)
T KOG0509|consen 118 WAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRL 197 (600)
T ss_pred HHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred HHcCCCCCCCC-CCCCCHHHHHHHhCCccccccccccc
Q 028517 167 IEEGAEVDATD-KAGQTPLMNAVICYNKEFSGCSSSNK 203 (208)
Q Consensus 167 l~~~~~~~~~~-~~g~t~l~~A~~~~~~~~~~~l~~~~ 203 (208)
+..|+.+..+| ..|.||||+|+..|+.+.++ |+..+
T Consensus 198 L~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g 234 (600)
T KOG0509|consen 198 LKFGASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEG 234 (600)
T ss_pred HHhcccccccccccCCchHHHHHhcCCcceEe-hhhhc
Confidence 99999999998 89999999999999999999 55443
No 11
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=8.3e-34 Score=222.65 Aligned_cols=190 Identities=27% Similarity=0.419 Sum_probs=174.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhc
Q 028517 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASI 91 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~ 91 (208)
..+..|+..|+++.++.|++.. +...+..+..|.||||.|+..|+.+++++|++.|.+ ++..+..|.|||+.|+..
T Consensus 3 ~~l~~ai~~gd~~~v~~ll~~~-~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~---~n~~~~~~~t~L~~A~~~ 78 (434)
T PHA02874 3 QDLRMCIYSGDIEAIEKIIKNK-GNCINISVDETTTPLIDAIRSGDAKIVELFIKHGAD---INHINTKIPHPLLTAIKI 78 (434)
T ss_pred HHHHHHHhcCCHHHHHHHHHcC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHc
Confidence 4688999999999999999866 455667788899999999999999999999998877 566778899999999999
Q ss_pred CCHHHHHHHHhCCC-----------------------CCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 028517 92 GNVTIVEMLLSKGA-----------------------DVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGC 148 (208)
Q Consensus 92 ~~~~~~~~Ll~~~~-----------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 148 (208)
|+.+++++|+++|+ +++.++..|.||+|+|+..|+.+++++|+++|++++..+..|.
T Consensus 79 ~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~ 158 (434)
T PHA02874 79 GAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGC 158 (434)
T ss_pred CCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCC
Confidence 99999999998765 4566788899999999999999999999999999999999999
Q ss_pred cHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccccccc
Q 028517 149 TALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTW 205 (208)
Q Consensus 149 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~ 205 (208)
||||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++++.
T Consensus 159 tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~ 215 (434)
T PHA02874 159 YPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNH 215 (434)
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999999999999998754
No 12
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=9.3e-34 Score=221.56 Aligned_cols=197 Identities=18% Similarity=0.236 Sum_probs=174.7
Q ss_pred CcccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC--CHHHHHHHHhcccccccccccCC
Q 028517 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG--HPEVVEILLSVDESANVVNAVDE 79 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~ 79 (208)
+++..+..+.||||.|++.|+.++++.|++.+ .+++.+|..|.||||+|+..+ ..+++++|++.|++.. ...+.
T Consensus 64 dvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~G--Adin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin--~~~d~ 139 (446)
T PHA02946 64 SPNETDDDGNYPLHIASKINNNRIVAMLLTHG--ADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKIN--NSVDE 139 (446)
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCc--CCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcc--cccCC
Confidence 56788899999999999999999999999876 577888999999999998765 4899999999887632 24577
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCCcHHHHHHhh
Q 028517 80 EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGW--LKIVELLISRGAKINSKDKVGCTALHRGAST 157 (208)
Q Consensus 80 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~ 157 (208)
.|.|||+ |+..++.+++++|++.|++++.+|..|.||+|.|+..++ .+++++|+++|++++.+|..|.||||+|+..
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~ 218 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSK 218 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 8999997 666789999999999999999999999999999887554 6899999999999999999999999999987
Q ss_pred C--CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCc-ccccccccccc
Q 028517 158 G--NSALCELLIEEGAEVDATDKAGQTPLMNAVICYNK-EFSGCSSSNKT 204 (208)
Q Consensus 158 ~--~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~-~~~~~l~~~~~ 204 (208)
+ +.+++++|++ |++++.+|.+|.||||+|+..++. ++++.|++++.
T Consensus 219 ~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~ 267 (446)
T PHA02946 219 TVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSN 267 (446)
T ss_pred CCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCC
Confidence 6 7899999985 899999999999999999999885 88888888764
No 13
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=9.3e-34 Score=208.21 Aligned_cols=183 Identities=15% Similarity=0.152 Sum_probs=162.1
Q ss_pred ccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCC-CcHHH
Q 028517 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG-WAPIH 86 (208)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~-~~~l~ 86 (208)
..+.+|||.|+..|+.++++.|++.+ .+.+.++..|.||||+|+..|+.+++++|++.+++ ++..+..| .||||
T Consensus 59 ~d~~TpLh~Aa~~g~~eiV~lLL~~G--advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gad---in~~~~~g~~TpL~ 133 (284)
T PHA02791 59 LENEFPLHQAATLEDTKIVKILLFSG--MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR---LMFYGKTGWKTSFY 133 (284)
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---cCccCCCCCcHHHH
Confidence 34689999999999999999999865 57777899999999999999999999999998876 45556666 58999
Q ss_pred HHHhcCCHHHHHHHHhCCCCCCCCC-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcH-HHHHHhhCCHHHHH
Q 028517 87 SAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTA-LHRGASTGNSALCE 164 (208)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~-l~~A~~~~~~~~~~ 164 (208)
.|+..|+.+++++|++++... .+ ..|.||||+|+..|+.++++.|+++|++++.++..|.|| ||+|+..|+.++++
T Consensus 134 ~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~ 211 (284)
T PHA02791 134 HAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQ 211 (284)
T ss_pred HHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHH
Confidence 999999999999999987543 23 258999999999999999999999999999999999987 99999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccccc
Q 028517 165 LLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 165 ~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
+|+++|++++.+|.+| +++ +..|++++|+++..
T Consensus 212 lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~ 244 (284)
T PHA02791 212 ALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHV 244 (284)
T ss_pred HHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhh
Confidence 9999999999999854 555 88899999998654
No 14
>PHA02859 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=195.68 Aligned_cols=177 Identities=19% Similarity=0.214 Sum_probs=157.4
Q ss_pred cccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhc--CCHHHHHHHHhcccccccccccC-CCCCc
Q 028517 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASC--GHPEVVEILLSVDESANVVNAVD-EEGWA 83 (208)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~--g~~~~~~~ll~~~~~~~~~~~~~-~~~~~ 83 (208)
.....+||+.|++.|+.+.|+.|++. .+..+..|.||||+|+.. ++.+++++|++.|++ ++..+ ..|.|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~-----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gad---vn~~~~~~g~T 89 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF-----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGAD---VNFKTRDNNLS 89 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh-----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCC---CCccCCCCCCC
Confidence 45678999999999999999999864 345688999999999975 489999999999887 45554 57999
Q ss_pred HHHHHHhc---CCHHHHHHHHhCCCCCCCCCCCCchHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHH-HHhh
Q 028517 84 PIHSAASI---GNVTIVEMLLSKGADVNLKNDGGRTALHYAAS--KGWLKIVELLISRGAKINSKDKVGCTALHR-GAST 157 (208)
Q Consensus 84 ~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~-A~~~ 157 (208)
|||.|+.. ++.+++++|+++|++++.++..|.||+|.|+. .++.+++++|+++|++++.+|..|.||||. |+..
T Consensus 90 pLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~ 169 (209)
T PHA02859 90 ALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFH 169 (209)
T ss_pred HHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhc
Confidence 99998753 57999999999999999999999999999876 468999999999999999999999999995 5678
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Q 028517 158 GNSALCELLIEEGAEVDATDKAGQTPLMNAVICY 191 (208)
Q Consensus 158 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~ 191 (208)
++.+++++|+++|++++.+|..|.||+++|..++
T Consensus 170 ~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 170 SDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 8999999999999999999999999999998765
No 15
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.5e-33 Score=220.02 Aligned_cols=199 Identities=27% Similarity=0.305 Sum_probs=150.0
Q ss_pred CcccccccCcHHHHHHHHcC-ChHHHHHHHHHhhhhhccCCCCCCchHHHHHH--hcCCHHHHHHHHhcccccccccccC
Q 028517 2 DMDIDQTIKDKDLFKAAETG-DSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAA--SCGHPEVVEILLSVDESANVVNAVD 78 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g-~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~--~~g~~~~~~~ll~~~~~~~~~~~~~ 78 (208)
|++..+..|.+|||.|+..| ..++++.|++.+ .+++..+..|.||||+|+ ..++.+++++|++.|.+ ++..+
T Consensus 75 din~~~~~g~TpLh~A~~~~~~~~iv~lLl~~g--a~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad---~~~~d 149 (471)
T PHA03095 75 DVNAPERCGFTPLHLYLYNATTLDVIKLLIKAG--ADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGAD---VNALD 149 (471)
T ss_pred CCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCC---CCccC
Confidence 56667778888888888888 488888887765 466777777888888888 45567778887776665 33344
Q ss_pred CCCCcHHHHHHhc-------------------------------------CCHHHHHHHHhCCCCCCCCCCCCchHHHHH
Q 028517 79 EEGWAPIHSAASI-------------------------------------GNVTIVEMLLSKGADVNLKNDGGRTALHYA 121 (208)
Q Consensus 79 ~~~~~~l~~a~~~-------------------------------------~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a 121 (208)
..|.||||.|+.. ++.++++.|++.|++++.+|..|.||+|+|
T Consensus 150 ~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~A 229 (471)
T PHA03095 150 LYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSM 229 (471)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 4445555544433 345555566666666666666666777777
Q ss_pred HHcCCH--HHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccc
Q 028517 122 ASKGWL--KIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCS 199 (208)
Q Consensus 122 ~~~~~~--~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l 199 (208)
+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.++.+|.||+++|+..|+.+++++|
T Consensus 230 a~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~L 309 (471)
T PHA03095 230 ATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAA 309 (471)
T ss_pred HhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHH
Confidence 666653 466777888889998998999999999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 028517 200 SSNKTW 205 (208)
Q Consensus 200 ~~~~~~ 205 (208)
++.++.
T Consensus 310 L~~~~~ 315 (471)
T PHA03095 310 LAKNPS 315 (471)
T ss_pred HHhCCC
Confidence 887654
No 16
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=218.50 Aligned_cols=196 Identities=26% Similarity=0.356 Sum_probs=171.2
Q ss_pred CcccccccCcHHHHHHHHcCChHHHHHHHHHhh-----------------------------------------------
Q 028517 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQL----------------------------------------------- 34 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~----------------------------------------------- 34 (208)
|++..+..|.+|||.|++.|+.+.+++|+....
T Consensus 62 dvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~ 141 (477)
T PHA02878 62 NVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSK 141 (477)
T ss_pred CCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccc
Confidence 567788899999999999988887777765310
Q ss_pred ---------------hhhccCCCCC-CchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHH
Q 028517 35 ---------------LKSLSLRNDD-DRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVE 98 (208)
Q Consensus 35 ---------------~~~~~~~~~~-g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 98 (208)
+.+++..+.. |.||||+|+..|+.+++++|++.|++ ++..+..|.||||.|+..++.++++
T Consensus 142 ~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad---~n~~d~~g~tpLh~A~~~~~~~iv~ 218 (477)
T PHA02878 142 DDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGAN---VNIPDKTNNSPLHHAVKHYNKPIVH 218 (477)
T ss_pred hhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhCCHHHHH
Confidence 1123345556 99999999999999999999998877 5677889999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCchHHHHHHHc-CCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHhhCCHHHHHHHHHcCCCCCCC
Q 028517 99 MLLSKGADVNLKNDGGRTALHYAASK-GWLKIVELLISRGAKINSKDK-VGCTALHRGASTGNSALCELLIEEGAEVDAT 176 (208)
Q Consensus 99 ~Ll~~~~~~~~~~~~~~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 176 (208)
+|++.|++++.++..|.||+|+|+.. ++.+++++|+++|++++..+. .|.||||.| .++.+++++|+++|+|++..
T Consensus 219 ~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~ 296 (477)
T PHA02878 219 ILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSL 296 (477)
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999999975 689999999999999998876 799999999 57789999999999999999
Q ss_pred CCCCCCHHHHHHHhC-Ccccccccccc
Q 028517 177 DKAGQTPLMNAVICY-NKEFSGCSSSN 202 (208)
Q Consensus 177 ~~~g~t~l~~A~~~~-~~~~~~~l~~~ 202 (208)
+.+|.||+++|+..+ ..++.+.|+++
T Consensus 297 d~~g~TpL~~A~~~~~~~~~~~~li~~ 323 (477)
T PHA02878 297 NSYKLTPLSSAVKQYLCINIGRILISN 323 (477)
T ss_pred CCCCCCHHHHHHHHcCccchHHHHHHH
Confidence 999999999999865 56778877764
No 17
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=220.79 Aligned_cols=200 Identities=21% Similarity=0.259 Sum_probs=173.6
Q ss_pred CcccccccCcHHHHHHHHc-----CChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC---CHHHHHHHHhccccccc
Q 028517 2 DMDIDQTIKDKDLFKAAET-----GDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG---HPEVVEILLSVDESANV 73 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~-----g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~~~~ll~~~~~~~~ 73 (208)
|++..+..+.+||+.|+.. +..++++.|++.+ .+++..+..|.||||+|+..+ +.+++++|++.|++
T Consensus 63 dvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G--adiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gad--- 137 (489)
T PHA02798 63 NVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENG--ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGAD--- 137 (489)
T ss_pred CCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCC--CCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCC---
Confidence 5677888999999998864 6789999999876 578888999999999999875 78999999998887
Q ss_pred ccccCCCCCcHHHHHHhcCC---HHHHHHHHhCCCCCCCCC-CCCchHHHHHHHc----CCHHHHHHHHHcCCC------
Q 028517 74 VNAVDEEGWAPIHSAASIGN---VTIVEMLLSKGADVNLKN-DGGRTALHYAASK----GWLKIVELLISRGAK------ 139 (208)
Q Consensus 74 ~~~~~~~~~~~l~~a~~~~~---~~~~~~Ll~~~~~~~~~~-~~~~~~l~~a~~~----~~~~~~~~ll~~~~~------ 139 (208)
++..+..|.||||.|++.++ .+++++|+++|++++.++ ..+.||+|.++.. ++.+++++|+++|++
T Consensus 138 vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 138 TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK 217 (489)
T ss_pred ccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence 57778899999999999987 999999999999998875 4688999988764 367888888877654
Q ss_pred ---------------------------------CCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Q 028517 140 ---------------------------------INSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMN 186 (208)
Q Consensus 140 ---------------------------------~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 186 (208)
++.+|..|.||||.|+..|+.+++++|+++|+|++.++..|.|||++
T Consensus 218 ~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~ 297 (489)
T PHA02798 218 SHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFT 297 (489)
T ss_pred cccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHH
Confidence 44466779999999999999999999999999999999999999999
Q ss_pred HHHhCCcccccccccccccc
Q 028517 187 AVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 187 A~~~~~~~~~~~l~~~~~~~ 206 (208)
|+..++.++++.|++.++..
T Consensus 298 A~~~~~~~iv~~lL~~~~~~ 317 (489)
T PHA02798 298 AFENESKFIFNSILNKKPNK 317 (489)
T ss_pred HHHcCcHHHHHHHHccCCCH
Confidence 99999999999999987643
No 18
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=217.73 Aligned_cols=200 Identities=25% Similarity=0.268 Sum_probs=163.8
Q ss_pred CcccccccCcHHHHHHHHcC---ChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC-CHHHHHHHHhccccccccccc
Q 028517 2 DMDIDQTIKDKDLFKAAETG---DSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG-HPEVVEILLSVDESANVVNAV 77 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g---~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g-~~~~~~~ll~~~~~~~~~~~~ 77 (208)
+++..+..+.++||.|++.| +.++++.|++.+ .+++.++..|.||||+|+..| +.+++++|++.|.+ ++..
T Consensus 39 ~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G--adin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~---in~~ 113 (471)
T PHA03095 39 DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAG--ADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGAD---VNAK 113 (471)
T ss_pred CcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCC---CCCC
Confidence 56778889999999999999 999999999877 578888899999999999999 59999999998887 6778
Q ss_pred CCCCCcHHHHHH--hcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCC-------
Q 028517 78 DEEGWAPIHSAA--SIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKG--WLKIVELLISRGAKINSKDKV------- 146 (208)
Q Consensus 78 ~~~~~~~l~~a~--~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~------- 146 (208)
+..|.||||.|+ ..++.+++++|+++|++++.++..|.||+|+++..+ ..+++++|+++|++++..+..
T Consensus 114 ~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~ 193 (471)
T PHA03095 114 DKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHH 193 (471)
T ss_pred CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 889999999999 556899999999999999999999999998877654 455666666665555444444
Q ss_pred ----------------------------CCcHHHHHHhhCCH--HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccc
Q 028517 147 ----------------------------GCTALHRGASTGNS--ALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFS 196 (208)
Q Consensus 147 ----------------------------~~t~l~~A~~~~~~--~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~ 196 (208)
|.||||.|+..|.. .+++.|++.|++++.+|..|.||||+|+..|+.+++
T Consensus 194 ~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v 273 (471)
T PHA03095 194 HLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRAC 273 (471)
T ss_pred HHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 44555555544432 456667788888888899999999999999999999
Q ss_pred cccccccccc
Q 028517 197 GCSSSNKTWS 206 (208)
Q Consensus 197 ~~l~~~~~~~ 206 (208)
++|++.++..
T Consensus 274 ~~LL~~gad~ 283 (471)
T PHA03095 274 RRLIALGADI 283 (471)
T ss_pred HHHHHcCCCC
Confidence 9999877654
No 19
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=3.3e-32 Score=220.19 Aligned_cols=198 Identities=24% Similarity=0.294 Sum_probs=171.1
Q ss_pred Ccccc-cccCcHHHHHHHH--cCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCC--HHHHHHHHhcccccccccc
Q 028517 2 DMDID-QTIKDKDLFKAAE--TGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGH--PEVVEILLSVDESANVVNA 76 (208)
Q Consensus 2 ~~~~~-~~~~~~~l~~a~~--~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~--~~~~~~ll~~~~~~~~~~~ 76 (208)
|++.. +..|.+|||.|+. .++.+++++|++.+ .+++..+..|.||||+|+..|+ .+++++|++.|++ ++.
T Consensus 168 DIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~G--ADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD---VN~ 242 (764)
T PHA02716 168 NLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNG--VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGD---MDM 242 (764)
T ss_pred CcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC---CCC
Confidence 45555 7789999998864 46789999999876 5788889999999999999995 5999999999987 567
Q ss_pred cCCCCCcHHHHH-------------------------------------HhcCCHHHHHHHHhCCCCCCCCCCCCchHHH
Q 028517 77 VDEEGWAPIHSA-------------------------------------ASIGNVTIVEMLLSKGADVNLKNDGGRTALH 119 (208)
Q Consensus 77 ~~~~~~~~l~~a-------------------------------------~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~ 119 (208)
++..|.||||.| ++.|+.+++++|+++|++++.+|..|.||||
T Consensus 243 kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH 322 (764)
T PHA02716 243 KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLH 322 (764)
T ss_pred CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHH
Confidence 788999999865 3457889999999999999999999999999
Q ss_pred HHHH--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHh--------------hCCHHHHHHHHHcCCCCCCCCCCCCCH
Q 028517 120 YAAS--KGWLKIVELLISRGAKINSKDKVGCTALHRGAS--------------TGNSALCELLIEEGAEVDATDKAGQTP 183 (208)
Q Consensus 120 ~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~--------------~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 183 (208)
+|+. .++.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.+|..|.||
T Consensus 323 ~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TP 402 (764)
T PHA02716 323 QYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTP 402 (764)
T ss_pred HHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCCh
Confidence 9764 457899999999999999999999999999865 368899999999999999999999999
Q ss_pred HHH----HHHhCCcccccccccccc
Q 028517 184 LMN----AVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 184 l~~----A~~~~~~~~~~~l~~~~~ 204 (208)
||. |...+..+++++|++.+.
T Consensus 403 Lh~y~~~a~n~~~~dIvklLis~~~ 427 (764)
T PHA02716 403 LTSYICTAQNYMYYDIIDCLISDKV 427 (764)
T ss_pred HHHHHHHHHhcChHHHHHHHHhCcc
Confidence 993 334567899999988653
No 20
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5.4e-32 Score=215.36 Aligned_cols=199 Identities=20% Similarity=0.255 Sum_probs=131.6
Q ss_pred CcccccccCcHHHHHHHHc---CChHHHHHHHHHhhhhhc-cCCCCCCchHHHHHHhc--CCHHHHHHHHhccccccccc
Q 028517 2 DMDIDQTIKDKDLFKAAET---GDSSTFKSLSKQQLLKSL-SLRNDDDRTLLHVAASC--GHPEVVEILLSVDESANVVN 75 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~---g~~~~~~~l~~~~~~~~~-~~~~~~g~t~L~~A~~~--g~~~~~~~ll~~~~~~~~~~ 75 (208)
|++..+..|.+||+.|+.. |+.+++++|++.+ .++ ...+..|.||||+|+.. ++.+++++|++.|+++ +
T Consensus 100 din~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G--adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi---~ 174 (494)
T PHA02989 100 DINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG--INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNL---F 174 (494)
T ss_pred CCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC--CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc---c
Confidence 3445555556666555443 4556666665544 344 44555566666655432 4556666666555542 2
Q ss_pred c-cCCCCCcHHHHHHhc----CCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHc------CCHHHHHHHHHcCCCCCCCC
Q 028517 76 A-VDEEGWAPIHSAASI----GNVTIVEMLLSKGADVNLKNDGGRTALHYAASK------GWLKIVELLISRGAKINSKD 144 (208)
Q Consensus 76 ~-~~~~~~~~l~~a~~~----~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~------~~~~~~~~ll~~~~~~~~~~ 144 (208)
. .+..|.|||+.|+.. ++.+++++|+++|++++.++..+.++++.++.. +..+++++|+. +++++.+|
T Consensus 175 ~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d 253 (494)
T PHA02989 175 EKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKD 253 (494)
T ss_pred ccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCC
Confidence 2 344555666655443 255666666666666655555555665554432 23344444433 46667777
Q ss_pred CCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccccccc
Q 028517 145 KVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 145 ~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
..|.||||+|+..|+.+++++|+++|+|++.++..|.||||+|+..++.+++++|++.++..
T Consensus 254 ~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~ 315 (494)
T PHA02989 254 KKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGK 315 (494)
T ss_pred CCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCh
Confidence 88999999999999999999999999999999999999999999999999999999977643
No 21
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.4e-31 Score=220.45 Aligned_cols=202 Identities=26% Similarity=0.334 Sum_probs=172.7
Q ss_pred CcccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccc---------
Q 028517 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESAN--------- 72 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~--------- 72 (208)
|++..+..|.+|||.|++.|+.++|++|++.+ .+.+..+..|.||||+|+..|+.+++++|++.+....
T Consensus 170 dvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~G--ad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~a 247 (682)
T PHA02876 170 DVNAKDIYCITPIHYAAERGNAKMVNLLLSYG--ADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKA 247 (682)
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC--CCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHH
Confidence 56778888999999999999999999999876 4667778889999999999999998888876543211
Q ss_pred -----------------cccccCCCCCcHHHHHHhcCCH-HHHHHHHhCCCCCCCCCCCCchHHHHHHHcC-CHHHHHHH
Q 028517 73 -----------------VVNAVDEEGWAPIHSAASIGNV-TIVEMLLSKGADVNLKNDGGRTALHYAASKG-WLKIVELL 133 (208)
Q Consensus 73 -----------------~~~~~~~~~~~~l~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~l 133 (208)
..+..+..|.||||.|+..++. +++++|++.|++++.++..|.||+|+|+..| ..++++.|
T Consensus 248 i~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~L 327 (682)
T PHA02876 248 IRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTL 327 (682)
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHH
Confidence 1344566789999999999886 5889999999999999999999999999988 58899999
Q ss_pred HHcCCCCCCCCCCCCcHHHHHHhh-CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccccccc
Q 028517 134 ISRGAKINSKDKVGCTALHRGAST-GNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTW 205 (208)
Q Consensus 134 l~~~~~~~~~~~~~~t~l~~A~~~-~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~ 205 (208)
+..|++++..+..|.||||.|+.. +..+++++|++.|++++.++..|.||||+|+..|+.+++++|++.++.
T Consensus 328 l~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad 400 (682)
T PHA02876 328 IMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD 400 (682)
T ss_pred HHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 999999999999999999999875 467888889999999999999999999999999999999999887654
No 22
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=6.8e-33 Score=206.72 Aligned_cols=190 Identities=31% Similarity=0.421 Sum_probs=173.5
Q ss_pred cccCcHHHHHHHHcCChHHHHHHHHHhhhhhcc--------CCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccC
Q 028517 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLS--------LRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVD 78 (208)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~--------~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~ 78 (208)
...+.+||..|+++|+.++|++|++.. ..+++ -..-.|.+||..|+..||+++++.|+..+++ +|...
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~-~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~---VN~tT 114 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHC-RASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGAS---VNDTT 114 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHh-cCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCc---ccccc
Confidence 345679999999999999999999965 22222 2245788999999999999999999998866 77888
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhC
Q 028517 79 EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTG 158 (208)
Q Consensus 79 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~ 158 (208)
....|||-.||.-|+.+++|+|+++|++++..|+.|.|.|++|+..|+.+++++|++.|+|++.++..|+|+||.++..|
T Consensus 115 ~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG 194 (615)
T KOG0508|consen 115 RTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESG 194 (615)
T ss_pred ccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccc
Q 028517 159 NSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSS 201 (208)
Q Consensus 159 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~ 201 (208)
+.+++++|+.+|+.++ +|..|.|||..|...|..++|..|++
T Consensus 195 ~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 195 SVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred cHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999998885 46779999999999999999999986
No 23
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.5e-31 Score=220.25 Aligned_cols=200 Identities=27% Similarity=0.303 Sum_probs=167.8
Q ss_pred CcccccccCcHHHHHHHHcCCh-HHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC-CHHHHHHHHhcccccccccccCC
Q 028517 2 DMDIDQTIKDKDLFKAAETGDS-STFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG-HPEVVEILLSVDESANVVNAVDE 79 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~-~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g-~~~~~~~ll~~~~~~~~~~~~~~ 79 (208)
+++..+..+.+|||.|+..|+. ++++.|++.+ .+++..+..|.||||+|+..| +.++++.|+..+.+ ++..+.
T Consensus 265 ~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~g--adin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gad---in~~d~ 339 (682)
T PHA02876 265 SVNSIDDCKNTPLHHASQAPSLSRLVPKLLERG--ADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD---VNAADR 339 (682)
T ss_pred CCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCC---CCCccc
Confidence 4556677889999999999987 4777777655 567778889999999999988 58999999988776 566778
Q ss_pred CCCcHHHHHHhc-CCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhC
Q 028517 80 EGWAPIHSAASI-GNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTG 158 (208)
Q Consensus 80 ~~~~~l~~a~~~-~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~ 158 (208)
.|.||||.|+.. ++.++++.|++.|++++.++..|.||+|+|+..++.+++++|+++|++++..+..|.||||+|+..+
T Consensus 340 ~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~ 419 (682)
T PHA02876 340 LYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGT 419 (682)
T ss_pred CCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcC
Confidence 889999998875 4688888999999999999999999999999999999999999999998888888889999888765
Q ss_pred C-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC-Ccccccccccccccc
Q 028517 159 N-SALCELLIEEGAEVDATDKAGQTPLMNAVICY-NKEFSGCSSSNKTWS 206 (208)
Q Consensus 159 ~-~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~-~~~~~~~l~~~~~~~ 206 (208)
. ..++++|+++|++++.+|.+|.||||+|+..+ +.+++++|++.++..
T Consensus 420 ~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~ 469 (682)
T PHA02876 420 NPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADV 469 (682)
T ss_pred CHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCC
Confidence 5 46788888999999999999999999998876 678999998887654
No 24
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=1.5e-31 Score=216.49 Aligned_cols=200 Identities=21% Similarity=0.202 Sum_probs=166.3
Q ss_pred CcccccccCcHHHHHH-------------------------------------HHcCChHHHHHHHHHhhhhhccCCCCC
Q 028517 2 DMDIDQTIKDKDLFKA-------------------------------------AETGDSSTFKSLSKQQLLKSLSLRNDD 44 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a-------------------------------------~~~g~~~~~~~l~~~~~~~~~~~~~~~ 44 (208)
|++..+..+.+||+.| ++.|+.++++.|++.+ .+++.+|..
T Consensus 239 DVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G--AdIN~kD~~ 316 (764)
T PHA02716 239 DMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG--VKLHYKDSA 316 (764)
T ss_pred CCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC--CceeccCCC
Confidence 5677788888888864 4567888888888765 467788999
Q ss_pred CchHHHHHHh--cCCHHHHHHHHhcccccccccccCCCCCcHHHHHHh--------------cCCHHHHHHHHhCCCCCC
Q 028517 45 DRTLLHVAAS--CGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAAS--------------IGNVTIVEMLLSKGADVN 108 (208)
Q Consensus 45 g~t~L~~A~~--~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~--------------~~~~~~~~~Ll~~~~~~~ 108 (208)
|+||||+|+. .++.+++++|++.|++ ++.++..|.||||.|+. .++.+++++|+++|++++
T Consensus 317 G~TPLH~Aaa~~~~~~eIVklLLe~GAD---IN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn 393 (764)
T PHA02716 317 GRTCLHQYILRHNISTDIIKLLHEYGND---LNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADIT 393 (764)
T ss_pred CCCHHHHHHHHhCCCchHHHHHHHcCCC---CccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCC
Confidence 9999999864 5689999999998876 67788999999999865 368999999999999999
Q ss_pred CCCCCCchHHHHH----HHcCCHHHHHHHHHcCC----------------------------------------------
Q 028517 109 LKNDGGRTALHYA----ASKGWLKIVELLISRGA---------------------------------------------- 138 (208)
Q Consensus 109 ~~~~~~~~~l~~a----~~~~~~~~~~~ll~~~~---------------------------------------------- 138 (208)
.++..|.||||.+ ...+..+++++|++.++
T Consensus 394 ~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~ 473 (764)
T PHA02716 394 AVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDS 473 (764)
T ss_pred CcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccc
Confidence 9999999999942 23456788888776532
Q ss_pred ---------------CCCCCCCCCCcHHHHHHhhCCH-----HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCc-----
Q 028517 139 ---------------KINSKDKVGCTALHRGASTGNS-----ALCELLIEEGAEVDATDKAGQTPLMNAVICYNK----- 193 (208)
Q Consensus 139 ---------------~~~~~~~~~~t~l~~A~~~~~~-----~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~----- 193 (208)
+.+..|..|.||||+|+..|+. +++++|++.|++++.++.+|+||||+|+++|+.
T Consensus 474 ~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~ 553 (764)
T PHA02716 474 TKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQW 553 (764)
T ss_pred cccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHH
Confidence 1233466799999999998876 556999999999999999999999999999987
Q ss_pred ccccccccccccc
Q 028517 194 EFSGCSSSNKTWS 206 (208)
Q Consensus 194 ~~~~~l~~~~~~~ 206 (208)
++++.|+++++..
T Consensus 554 eIvk~LL~~ga~~ 566 (764)
T PHA02716 554 YIVKNILDKRPNV 566 (764)
T ss_pred HHHHHHHhcCCCc
Confidence 9999999988654
No 25
>PHA02946 ankyin-like protein; Provisional
Probab=99.98 E-value=8.2e-31 Score=205.05 Aligned_cols=185 Identities=21% Similarity=0.250 Sum_probs=164.0
Q ss_pred cHHHHHHH--HcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHH
Q 028517 11 DKDLFKAA--ETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (208)
Q Consensus 11 ~~~l~~a~--~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a 88 (208)
.+.||.++ ..++.++++.|++.+ .+++.++..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~~G--advn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd---in~~d~~g~TpLh~A 112 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLHRG--YSPNETDDDGNYPLHIASKINNNRIVAMLLTHGAD---PNACDKQHKTPLYYL 112 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHHCc--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC---CCCCCCCCCCHHHHH
Confidence 56777655 445778999999876 57888899999999999999999999999998877 567889999999999
Q ss_pred HhcC--CHHHHHHHHhCCCCCCC-CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC--HHHH
Q 028517 89 ASIG--NVTIVEMLLSKGADVNL-KNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN--SALC 163 (208)
Q Consensus 89 ~~~~--~~~~~~~Ll~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~--~~~~ 163 (208)
+..+ ..+++++|+++|++++. .+..|.||++ |+..+..+++++|+++|++++..|..|.||||.|+..++ .+++
T Consensus 113 ~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v 191 (446)
T PHA02946 113 SGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTI 191 (446)
T ss_pred HHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHH
Confidence 8765 48999999999999985 5889999997 667799999999999999999999999999999887554 6899
Q ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHhC--Cccccccccc
Q 028517 164 ELLIEEGAEVDATDKAGQTPLMNAVICY--NKEFSGCSSS 201 (208)
Q Consensus 164 ~~Ll~~~~~~~~~~~~g~t~l~~A~~~~--~~~~~~~l~~ 201 (208)
++|+++|++++.+|.+|.||||+|+..+ +.+++++|++
T Consensus 192 ~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~ 231 (446)
T PHA02946 192 SWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP 231 (446)
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc
Confidence 9999999999999999999999999986 7789998885
No 26
>PHA02795 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=199.21 Aligned_cols=186 Identities=20% Similarity=0.096 Sum_probs=165.4
Q ss_pred HHHHcCChHHHHHHHHHhhhhhcc------CCCCCCchHHHHHHh--cCCHHHHHHHHhcccccccccccCCCCCcHHHH
Q 028517 16 KAAETGDSSTFKSLSKQQLLKSLS------LRNDDDRTLLHVAAS--CGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (208)
Q Consensus 16 ~a~~~g~~~~~~~l~~~~~~~~~~------~~~~~g~t~L~~A~~--~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~ 87 (208)
.|+..+..|+++.|+..+. +.. .++..++|+||+++. .|+.+++++|++.|++. +. ..+.||+|.
T Consensus 83 ~~~~~~~k~~~~~l~s~~~--~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADI---n~--~~~~t~lh~ 155 (437)
T PHA02795 83 LFAYITYKDIISALVSKNY--MEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVI---YK--IECLNAYFR 155 (437)
T ss_pred HHhhcchHHHHHHHHhccc--ccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCC---CC--CCCCCHHHH
Confidence 8999999999999998774 322 467789999999999 89999999999999984 33 245899999
Q ss_pred HHhcCCHHHHHHHHhCCCCCCCCC------CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHH
Q 028517 88 AASIGNVTIVEMLLSKGADVNLKN------DGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA 161 (208)
Q Consensus 88 a~~~~~~~~~~~Ll~~~~~~~~~~------~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~ 161 (208)
|+..++.+++++|+++|+...... ..+.+++|.+...+..+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus 156 A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~e 235 (437)
T PHA02795 156 GICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYID 235 (437)
T ss_pred HHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999997433222 24778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHhCC--------ccccccccccccccCC
Q 028517 162 LCELLIEEGAEVDATDKAGQTPLMNAVICYN--------KEFSGCSSSNKTWSGC 208 (208)
Q Consensus 162 ~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~--------~~~~~~l~~~~~~~~~ 208 (208)
++++|+++|++++.++..|.||||+|+..|+ .+++++|+++++..+|
T Consensus 236 iVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 236 LVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999999999995 5899999999987776
No 27
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=4.7e-31 Score=203.35 Aligned_cols=184 Identities=33% Similarity=0.424 Sum_probs=170.1
Q ss_pred CcccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCC-CCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCC
Q 028517 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRN-DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEE 80 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~ 80 (208)
+++..|..+-+.||.|+.+++++++++|++.+. +.+... .-+.||||.|++.|+..++++|++.|++ +..+|..
T Consensus 70 ~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~ga--dvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAd---pt~~D~~ 144 (600)
T KOG0509|consen 70 SVNNPDREGVTLLHWAAINNRLDVARYLISHGA--DVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGAD---PTLKDKQ 144 (600)
T ss_pred CCCCCCcCCccceeHHHHcCcHHHHHHHHHcCC--CccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCC---CceecCC
Confidence 456678899999999999999999999999874 666555 6789999999999999999999999998 5778899
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHhhCC
Q 028517 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD-KVGCTALHRGASTGN 159 (208)
Q Consensus 81 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~A~~~~~ 159 (208)
|.+|+|.|++.++...+-+|+.++.+++.+|..|.||+++|+..+....+..|+..++.+...| .+|.||||+|+..|+
T Consensus 145 G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN 224 (600)
T KOG0509|consen 145 GLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGN 224 (600)
T ss_pred CCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999888999999999999887 889999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Q 028517 160 SALCELLIEEGAEVDATDKAGQTPLMNAVIC 190 (208)
Q Consensus 160 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~ 190 (208)
..++..+++.|++.+..|.+|+||+..|...
T Consensus 225 ~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 225 LTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999966677899999999999999999887
No 28
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=9.9e-31 Score=206.01 Aligned_cols=200 Identities=28% Similarity=0.359 Sum_probs=157.2
Q ss_pred cccCcHHHHHHHHcCChHHHHHHHHHh---hhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccc-----------
Q 028517 7 QTIKDKDLFKAAETGDSSTFKSLSKQQ---LLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESAN----------- 72 (208)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~~~~l~~~~---~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~----------- 72 (208)
+..+..+||.|++.|..|.++.++.+. ....++..+..+.+|||.|...|+.+.++.+++.++...
T Consensus 184 ~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~k 263 (929)
T KOG0510|consen 184 DIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEK 263 (929)
T ss_pred cCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHH
Confidence 333444444444444444444444411 123445567777888888888888888888887655432
Q ss_pred -cccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHH-cC-CCCCCCCCCCCc
Q 028517 73 -VVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLIS-RG-AKINSKDKVGCT 149 (208)
Q Consensus 73 -~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-~~-~~~~~~~~~~~t 149 (208)
.++..|..|.||||+|++.|++++++.|+..|++++.++.++.||+|.|+..|++++++-|++ .+ ...+..|-.|.|
T Consensus 264 elv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~t 343 (929)
T KOG0510|consen 264 ELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMT 343 (929)
T ss_pred HHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCC
Confidence 244557889999999999999999999999999999999999999999999999999999998 33 345667788999
Q ss_pred HHHHHHhhCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHhCCcccccccccccccc
Q 028517 150 ALHRGASTGNSALCELLIEEGAEVD---ATDKAGQTPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 150 ~l~~A~~~~~~~~~~~Ll~~~~~~~---~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
|||+|++.|+..+++.|+++|+... ..|++|.||||.|+..|+..+|+.|++++.+.
T Consensus 344 pLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 344 PLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADI 403 (929)
T ss_pred chhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCce
Confidence 9999999999999999999998876 45999999999999999999999999999875
No 29
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1e-29 Score=202.35 Aligned_cols=198 Identities=20% Similarity=0.222 Sum_probs=155.7
Q ss_pred CcccccccCcHHHHHHHHcC--ChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC------CHHHHHHHHhccccccc
Q 028517 2 DMDIDQTIKDKDLFKAAETG--DSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG------HPEVVEILLSVDESANV 73 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g--~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g------~~~~~~~ll~~~~~~~~ 73 (208)
|++.. ..+.++++.++..+ +.++++.|++.+ .+++.++ .+.||||.|+..+ +.+++++|++.|++
T Consensus 28 dvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~G--Advn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gad--- 100 (494)
T PHA02989 28 DVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNG--ADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGAD--- 100 (494)
T ss_pred Ccccc-cCCCCHHHHHHhcCCCChHHHHHHHHcC--CCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCC---
Confidence 44554 45778876655443 678999998876 3555544 5688999887654 46789999988877
Q ss_pred ccccCCCCCcHHHHHHhc---CCHHHHHHHHhCCCCC-CCCCCCCchHHHHHHHc--CCHHHHHHHHHcCCCCCC-CCCC
Q 028517 74 VNAVDEEGWAPIHSAASI---GNVTIVEMLLSKGADV-NLKNDGGRTALHYAASK--GWLKIVELLISRGAKINS-KDKV 146 (208)
Q Consensus 74 ~~~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~-~~~~~~~~~~l~~a~~~--~~~~~~~~ll~~~~~~~~-~~~~ 146 (208)
++..+..|.|||+.|+.. ++.+++++|+++|+++ +.++..|.||||+|+.. ++.+++++|+++|++++. .+..
T Consensus 101 in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~ 180 (494)
T PHA02989 101 INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLY 180 (494)
T ss_pred CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccccc
Confidence 567778889999877654 6789999999999998 78888899999988754 578899999999998887 5678
Q ss_pred CCcHHHHHHhhC----CHHHHHHHHHcCCCCC--------------------------------------CCCCCCCCHH
Q 028517 147 GCTALHRGASTG----NSALCELLIEEGAEVD--------------------------------------ATDKAGQTPL 184 (208)
Q Consensus 147 ~~t~l~~A~~~~----~~~~~~~Ll~~~~~~~--------------------------------------~~~~~g~t~l 184 (208)
|.||||.|++.+ +.+++++|+++|++++ .+|..|.|||
T Consensus 181 g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL 260 (494)
T PHA02989 181 GLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPL 260 (494)
T ss_pred CCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHH
Confidence 889998887654 7888888888887654 3455699999
Q ss_pred HHHHHhCCcccccccccccccc
Q 028517 185 MNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 185 ~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
|+|+..|+.+++++|+++++..
T Consensus 261 ~~Aa~~~~~~~v~~LL~~Gadi 282 (494)
T PHA02989 261 LISAKVDNYEAFNYLLKLGDDI 282 (494)
T ss_pred HHHHHhcCHHHHHHHHHcCCCc
Confidence 9999999999999999988754
No 30
>PHA02917 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.3e-29 Score=205.51 Aligned_cols=191 Identities=18% Similarity=0.160 Sum_probs=160.0
Q ss_pred ccccccCcHHHHHHHHc---CChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHH----HHHHHHhcccccccccc
Q 028517 4 DIDQTIKDKDLFKAAET---GDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPE----VVEILLSVDESANVVNA 76 (208)
Q Consensus 4 ~~~~~~~~~~l~~a~~~---g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~----~~~~ll~~~~~~~~~~~ 76 (208)
+..|..++++||.|+.. |+.+++++|++.+ .+....+..|.||||.|+.+|+.+ +++.|++.+... +.
T Consensus 26 ~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~g--a~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~---n~ 100 (661)
T PHA02917 26 DTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSG--TNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYS---NI 100 (661)
T ss_pred cccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCC--CCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCC---CC
Confidence 44577899999997555 8899999999866 577788999999999999999965 456676543321 22
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHH--HcCCHHHHHHHHHcCCCCCCCCC---CC----
Q 028517 77 VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAA--SKGWLKIVELLISRGAKINSKDK---VG---- 147 (208)
Q Consensus 77 ~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~---~~---- 147 (208)
. ...+++++|+..++.+++++|+++|++++.+|..|.||++.++ ..++.+++++|+++|++++..+. .|
T Consensus 101 ~--~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~ 178 (661)
T PHA02917 101 N--DFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYD 178 (661)
T ss_pred C--CcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccc
Confidence 1 2236778899999999999999999999999999999999654 57899999999999999976543 23
Q ss_pred -------CcHHHHHHh-----------hCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCc--cccccccc
Q 028517 148 -------CTALHRGAS-----------TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNK--EFSGCSSS 201 (208)
Q Consensus 148 -------~t~l~~A~~-----------~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~--~~~~~l~~ 201 (208)
.||||+|+. .++.+++++|+++|++++.++.+|.||||+|+..|+. |+|++|+.
T Consensus 179 ~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 179 DYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred cccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 599999986 4689999999999999999999999999999999996 69999975
No 31
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=7.1e-30 Score=201.25 Aligned_cols=203 Identities=27% Similarity=0.317 Sum_probs=151.2
Q ss_pred CCcccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhccc--ccccccccC
Q 028517 1 MDMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDE--SANVVNAVD 78 (208)
Q Consensus 1 ~~~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~--~~~~~~~~~ 78 (208)
+|+++.+..+.||||.|+..++.|..+.|+..+ .++...+.+|.+|+|.|+.+|..++++.++.... ....++..+
T Consensus 145 ~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~--a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~ 222 (929)
T KOG0510|consen 145 ADVNLEDENGFTPLHLAARKNKVEAKKELINKG--ADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDN 222 (929)
T ss_pred CCccccccCCCchhhHHHhcChHHHHHHHHhcC--CCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhccccccc
Confidence 366777777777777777777777556665544 4666667777777777777777777777775111 111245556
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCC---------------CCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 028517 79 EEGWAPIHSAASIGNVTIVEMLLSKGAD---------------VNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSK 143 (208)
Q Consensus 79 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~---------------~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 143 (208)
..+.+|||.|+..|++++++.+++.|.. ++..|++|.||+|+|++.|+.++++.|+.+|++++.+
T Consensus 223 n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k 302 (929)
T KOG0510|consen 223 NEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSK 302 (929)
T ss_pred CCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccccc
Confidence 6778888888888888888888886644 3345677888888888888888888888888888888
Q ss_pred CCCCCcHHHHHHhhCCHHHHHHHHH-cC-CCCCCCCCCCCCHHHHHHHhCCccccccccccccc
Q 028517 144 DKVGCTALHRGASTGNSALCELLIE-EG-AEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTW 205 (208)
Q Consensus 144 ~~~~~t~l~~A~~~~~~~~~~~Ll~-~~-~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~ 205 (208)
+.++.||||.|+++|+++.++-|++ .+ ..++..|..|.||+|.|++.|+..+++.|+..++.
T Consensus 303 n~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~ 366 (929)
T KOG0510|consen 303 NKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGAL 366 (929)
T ss_pred CCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChh
Confidence 8888888888888888888888887 43 44566677888888888888888888888877654
No 32
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=2.7e-29 Score=199.70 Aligned_cols=193 Identities=20% Similarity=0.267 Sum_probs=165.3
Q ss_pred CcHHHHHHHH--cCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhc-----CCHHHHHHHHhcccccccccccCCCCC
Q 028517 10 KDKDLFKAAE--TGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASC-----GHPEVVEILLSVDESANVVNAVDEEGW 82 (208)
Q Consensus 10 ~~~~l~~a~~--~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~-----g~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (208)
+.+++..... .++.++++.|++.+ .+++..+..|.||||.|+.. ++.+++++|++.|++ ++..+..|.
T Consensus 36 ~~~~~~~yl~~~~~~~~iv~~Ll~~G--advn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad---iN~~d~~G~ 110 (489)
T PHA02798 36 EYSIFQKYLQRDSPSTDIVKLFINLG--ANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGAD---INKKNSDGE 110 (489)
T ss_pred cchHHHHHHhCCCCCHHHHHHHHHCC--CCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC---CCCCCCCcC
Confidence 4455543333 44789999999877 58888899999999998864 678999999999887 677888999
Q ss_pred cHHHHHHhcC---CHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCC---HHHHHHHHHcCCCCCCCC-CCCCcHHHHHH
Q 028517 83 APIHSAASIG---NVTIVEMLLSKGADVNLKNDGGRTALHYAASKGW---LKIVELLISRGAKINSKD-KVGCTALHRGA 155 (208)
Q Consensus 83 ~~l~~a~~~~---~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~ll~~~~~~~~~~-~~~~t~l~~A~ 155 (208)
||||.|+..+ +.+++++|+++|++++.++..|.||+|+|+..++ .+++++|+++|++++..+ ..|.||+|.++
T Consensus 111 TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~ 190 (489)
T PHA02798 111 TPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYF 190 (489)
T ss_pred cHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHH
Confidence 9999999875 7899999999999999999999999999999987 999999999999998875 46889999887
Q ss_pred hh----CCHHHHHHHHHcCCCC---------------------------------------CCCCCCCCCHHHHHHHhCC
Q 028517 156 ST----GNSALCELLIEEGAEV---------------------------------------DATDKAGQTPLMNAVICYN 192 (208)
Q Consensus 156 ~~----~~~~~~~~Ll~~~~~~---------------------------------------~~~~~~g~t~l~~A~~~~~ 192 (208)
.. ++.+++++|+++|+++ +.+|..|.||||+|+..++
T Consensus 191 ~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~ 270 (489)
T PHA02798 191 KYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNN 270 (489)
T ss_pred HhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCc
Confidence 64 4788888888877644 4466789999999999999
Q ss_pred ccccccccccccccC
Q 028517 193 KEFSGCSSSNKTWSG 207 (208)
Q Consensus 193 ~~~~~~l~~~~~~~~ 207 (208)
.+++++|++.++..+
T Consensus 271 ~~~v~~LL~~GAdin 285 (489)
T PHA02798 271 RKIFEYLLQLGGDIN 285 (489)
T ss_pred HHHHHHHHHcCCccc
Confidence 999999999887654
No 33
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=6.3e-30 Score=190.98 Aligned_cols=191 Identities=28% Similarity=0.370 Sum_probs=167.1
Q ss_pred HHHHHHcCChHHHHHHHHHhh---hhhccCCCCCCchHHHHHHhcCCHHHHHHHHh-cccccccccc-----cCCCCCcH
Q 028517 14 LFKAAETGDSSTFKSLSKQQL---LKSLSLRNDDDRTLLHVAASCGHPEVVEILLS-VDESANVVNA-----VDEEGWAP 84 (208)
Q Consensus 14 l~~a~~~g~~~~~~~l~~~~~---~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~-~~~~~~~~~~-----~~~~~~~~ 84 (208)
...|++.|....++.|+.... ..+.-....+|.|||..||++|+.+++++|++ .+++++.... ....|-+|
T Consensus 8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Iegapp 87 (615)
T KOG0508|consen 8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPP 87 (615)
T ss_pred HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCch
Confidence 448999999999999986532 12222346788999999999999999999998 4444322111 12357789
Q ss_pred HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHH
Q 028517 85 IHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCE 164 (208)
Q Consensus 85 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~ 164 (208)
|-.|...|++++++.|+++|+.++.....+.|||.-||..|+.+++++|+++|+|++..+..|.|.|++||..|+.++++
T Consensus 88 LWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~q 167 (615)
T KOG0508|consen 88 LWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQ 167 (615)
T ss_pred hhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHH
Confidence 99999999999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccccc
Q 028517 165 LLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 165 ~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
+|++.|+|++.++..|.|+||-++..|+.||++.|+.+++
T Consensus 168 yLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga 207 (615)
T KOG0508|consen 168 YLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGA 207 (615)
T ss_pred HHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999998765
No 34
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.6e-28 Score=174.42 Aligned_cols=158 Identities=25% Similarity=0.233 Sum_probs=140.6
Q ss_pred CCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcC--CHHHHHHHHhCCCCCCCCC-CCCchHHH
Q 028517 43 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIG--NVTIVEMLLSKGADVNLKN-DGGRTALH 119 (208)
Q Consensus 43 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~-~~~~~~l~ 119 (208)
+.+.|||+.|+..|+.++++.|+.. .+..+..|.||||.|+..+ +.+++++|+++|++++.++ ..|.||+|
T Consensus 19 ~~~~~pL~~A~~~~~~~~vk~Li~~------~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh 92 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIEGVKKWIKF------VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALH 92 (209)
T ss_pred hccCcHHHHHHHhCcHHHHHHHHHh------hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHH
Confidence 4568999999999999999999863 3556788999999999854 8999999999999999987 48999999
Q ss_pred HHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHh--hCCHHHHHHHHHcCCCCCCCCCCCCCHHHH-HHHhCCc
Q 028517 120 YAASK---GWLKIVELLISRGAKINSKDKVGCTALHRGAS--TGNSALCELLIEEGAEVDATDKAGQTPLMN-AVICYNK 193 (208)
Q Consensus 120 ~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~--~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~-A~~~~~~ 193 (208)
+|+.. +..+++++|+++|++++.++..|.||||.|+. .++.+++++|+++|++++.++.+|.||+|. |+..++.
T Consensus 93 ~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~ 172 (209)
T PHA02859 93 HYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDK 172 (209)
T ss_pred HHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCH
Confidence 98764 47899999999999999999999999999886 468999999999999999999999999995 6678899
Q ss_pred ccccccccccccc
Q 028517 194 EFSGCSSSNKTWS 206 (208)
Q Consensus 194 ~~~~~l~~~~~~~ 206 (208)
+++++|++++...
T Consensus 173 ~iv~~Ll~~Gadi 185 (209)
T PHA02859 173 KIFDFLTSLGIDI 185 (209)
T ss_pred HHHHHHHHcCCCC
Confidence 9999999987643
No 35
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.96 E-value=9.4e-28 Score=200.64 Aligned_cols=180 Identities=25% Similarity=0.327 Sum_probs=163.0
Q ss_pred ccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHH
Q 028517 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (208)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~ 87 (208)
.....+|+.|+..|+.+.++.|++.+ .+++..|..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||.
T Consensus 523 ~~~~~~L~~Aa~~g~~~~l~~Ll~~G--~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad---in~~d~~G~TpL~~ 597 (823)
T PLN03192 523 PNMASNLLTVASTGNAALLEELLKAK--LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN---VHIRDANGNTALWN 597 (823)
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC---CCCcCCCCCCHHHH
Confidence 34578999999999999999999766 57888999999999999999999999999998876 67788899999999
Q ss_pred HHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHH
Q 028517 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 167 (208)
Q Consensus 88 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 167 (208)
|+..|+.+++++|++.+...+. ..+.+++|.|+..|+.++++.|+++|++++..|..|.||||.|+..|+.+++++|+
T Consensus 598 A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll 675 (823)
T PLN03192 598 AISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLI 675 (823)
T ss_pred HHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHH
Confidence 9999999999999998765543 45778999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCC-CCHHHHHHHhCCcc
Q 028517 168 EEGAEVDATDKAG-QTPLMNAVICYNKE 194 (208)
Q Consensus 168 ~~~~~~~~~~~~g-~t~l~~A~~~~~~~ 194 (208)
++|++++..+.+| .+|...+......+
T Consensus 676 ~~GAdv~~~~~~g~~t~~~l~~~~~~~~ 703 (823)
T PLN03192 676 MNGADVDKANTDDDFSPTELRELLQKRE 703 (823)
T ss_pred HcCCCCCCCCCCCCCCHHHHHHHHHHhh
Confidence 9999999999888 99999887655444
No 36
>PHA02730 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.5e-27 Score=190.24 Aligned_cols=194 Identities=14% Similarity=0.128 Sum_probs=160.9
Q ss_pred cccccCcHHHHHHHHcC---ChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC--CHHHHHHHHhcccccccccccCC
Q 028517 5 IDQTIKDKDLFKAAETG---DSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG--HPEVVEILLSVDESANVVNAVDE 79 (208)
Q Consensus 5 ~~~~~~~~~l~~a~~~g---~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~ll~~~~~~~~~~~~~~ 79 (208)
..|..|+|+||.|+..| +.++++.|++.+ .+++.+|..|.||||.|+..+ +.+++++|++.|.... .+..+.
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~G--Adin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~-~~~~~~ 112 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRG--VERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNAS-NELTSN 112 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCC--CCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCC-cccccc
Confidence 56778999999999997 499999999876 688889999999999999976 7999999999876543 344566
Q ss_pred CCCcHHHHHHh--cCCHHHHHHHHh-CCCCCCCCCC-----CCchHHHHHHHcCCHHHHHHHHHcCCCCCC-------CC
Q 028517 80 EGWAPIHSAAS--IGNVTIVEMLLS-KGADVNLKND-----GGRTALHYAASKGWLKIVELLISRGAKINS-------KD 144 (208)
Q Consensus 80 ~~~~~l~~a~~--~~~~~~~~~Ll~-~~~~~~~~~~-----~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~-------~~ 144 (208)
.+.+||+.++. .++.+++++|++ .+.+++.... .|.+|++++...+..+++++|+++|++++. .+
T Consensus 113 ~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~ 192 (672)
T PHA02730 113 INDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYD 192 (672)
T ss_pred cCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccccc
Confidence 68889998888 788999999997 6677775532 789999999999999999999999999851 23
Q ss_pred CCCCcH-HHHH------HhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHH--HHHhCCccccccccc
Q 028517 145 KVGCTA-LHRG------ASTGNSALCELLIEEGAEVDATDKAGQTPLMN--AVICYNKEFSGCSSS 201 (208)
Q Consensus 145 ~~~~t~-l~~A------~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~--A~~~~~~~~~~~l~~ 201 (208)
....+| |+++ ...+..|++++|+++|++++.++.+|.||||+ |...++.|++++|++
T Consensus 193 ~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 193 SDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred CCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 334444 4423 34568999999999999999999999999996 555677999999998
No 37
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.95 E-value=1.5e-27 Score=197.38 Aligned_cols=199 Identities=33% Similarity=0.420 Sum_probs=176.6
Q ss_pred cccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCC
Q 028517 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (208)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~ 82 (208)
.+..+..|.+++|.|+..|.+-..-.++.++ +.+++.....|.||||.|+..|+.+.++.+++.+.. .+.....+-
T Consensus 433 ~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~-g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~---~~~~~~~~l 508 (1143)
T KOG4177|consen 433 PNAKAKLGYTPLHVAAKKGRYLQIARLLLQY-GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAN---DNLDAKKGL 508 (1143)
T ss_pred hhhHhhcCCChhhhhhhcccHhhhhhhHhhc-CCCcchhccccCcchhhhhccCCchHHHHhhhcCCc---cCccchhcc
Confidence 3456677899999999999544444444444 467888889999999999999999999999976633 445556889
Q ss_pred cHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHH
Q 028517 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSAL 162 (208)
Q Consensus 83 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~ 162 (208)
+++|.+...+...+++.++++|+..+.++..++||||.|+..|+.+++++|+++|++.+.+++.|+||||.|+..|+.++
T Consensus 509 ~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i 588 (1143)
T KOG4177|consen 509 TPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDI 588 (1143)
T ss_pred chhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccccccc
Q 028517 163 CELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTW 205 (208)
Q Consensus 163 ~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~ 205 (208)
+++|+++|++++..+.+|.|||++|++.|+.++++.|...+..
T Consensus 589 ~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 589 AELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 9999999999999999999999999999999999998875543
No 38
>PHA02730 ankyrin-like protein; Provisional
Probab=99.95 E-value=2e-26 Score=183.81 Aligned_cols=200 Identities=15% Similarity=0.160 Sum_probs=164.0
Q ss_pred CcccccccCcHHHHH--HHHcCChHHHHHHHH--------------------------------HhhhhhccC-------
Q 028517 2 DMDIDQTIKDKDLFK--AAETGDSSTFKSLSK--------------------------------QQLLKSLSL------- 40 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~--a~~~g~~~~~~~l~~--------------------------------~~~~~~~~~------- 40 (208)
|++..+..|+||||. |...|+.|+++.|++ .+ .+...
T Consensus 227 dIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~i~~~~~~~ 304 (672)
T PHA02730 227 SIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYN--VDMEIVNLLIEG 304 (672)
T ss_pred CCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCC--cchHHHHHHhhc
Confidence 678889999999985 555677999999998 11 11111
Q ss_pred -------------CCCCCch---------------------HHHHHHhcC---CHHHHHHHHhcccccccccccCCCCCc
Q 028517 41 -------------RNDDDRT---------------------LLHVAASCG---HPEVVEILLSVDESANVVNAVDEEGWA 83 (208)
Q Consensus 41 -------------~~~~g~t---------------------~L~~A~~~g---~~~~~~~ll~~~~~~~~~~~~~~~~~~ 83 (208)
.+..|.+ .|+.-..++ +.+++++|++.|++. +.. ..|.|
T Consensus 305 ~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdI---N~k-~~G~T 380 (672)
T PHA02730 305 RHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATM---DKT-TDNNY 380 (672)
T ss_pred cCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCC---CcC-CCCCc
Confidence 3445544 566666655 689999999999984 443 68999
Q ss_pred HHHHHHhcCC----HHHHHHHHhCCC--CCCCCCCCCchHHHH---HHHcC---------CHHHHHHHHHcCCCCCCCCC
Q 028517 84 PIHSAASIGN----VTIVEMLLSKGA--DVNLKNDGGRTALHY---AASKG---------WLKIVELLISRGAKINSKDK 145 (208)
Q Consensus 84 ~l~~a~~~~~----~~~~~~Ll~~~~--~~~~~~~~~~~~l~~---a~~~~---------~~~~~~~ll~~~~~~~~~~~ 145 (208)
|||.|+..++ .+++++|+++|+ +++.++..|.||+|. +...+ ..+++++|+.+|++++.+|.
T Consensus 381 pLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~ 460 (672)
T PHA02730 381 PLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDN 460 (672)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCC
Confidence 9999988875 899999999997 588889999999984 32222 23569999999999999999
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHh--CCccccccccccccccC
Q 028517 146 VGCTALHRGASTGNSALCELLIEEGAEVDATDK-AGQTPLMNAVIC--YNKEFSGCSSSNKTWSG 207 (208)
Q Consensus 146 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~A~~~--~~~~~~~~l~~~~~~~~ 207 (208)
.|.||||+|+..++.+++++|+++|++++..+. .|.||+++|+.. ++.+++++|+++++...
T Consensus 461 ~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~ 525 (672)
T PHA02730 461 ENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE 525 (672)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999997 599999999974 78999999999998654
No 39
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.94 E-value=4.6e-26 Score=190.54 Aligned_cols=160 Identities=25% Similarity=0.282 Sum_probs=147.6
Q ss_pred CCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHH
Q 028517 42 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYA 121 (208)
Q Consensus 42 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a 121 (208)
+..+.++|+.|+..|+.++++.|++.|.+ ++..|..|.||||.|+..|+.+++++|+++|++++.+|..|.||+|.|
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d---~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A 598 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLD---PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNA 598 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHH
Confidence 44567899999999999999999998877 577889999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccc
Q 028517 122 ASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSS 201 (208)
Q Consensus 122 ~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~ 201 (208)
+..|+.+++++|+..+...+. ..+.++||.|+..|+.+++++|+++|+|++.+|.+|.||||+|+..|+.+++++|++
T Consensus 599 ~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 599 ISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred HHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 999999999999988765543 346789999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 028517 202 NKTWS 206 (208)
Q Consensus 202 ~~~~~ 206 (208)
+++..
T Consensus 677 ~GAdv 681 (823)
T PLN03192 677 NGADV 681 (823)
T ss_pred cCCCC
Confidence 87643
No 40
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.3e-25 Score=171.67 Aligned_cols=167 Identities=18% Similarity=0.184 Sum_probs=147.3
Q ss_pred cccccCcHHHHHHHH--cCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhccccccccccc-----
Q 028517 5 IDQTIKDKDLFKAAE--TGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAV----- 77 (208)
Q Consensus 5 ~~~~~~~~~l~~a~~--~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~----- 77 (208)
..+...+++||.++. .|+.+++++|++.+. +++. ..+.||+|.|+..++.+++++|++.|... .+..
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GA--DIn~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~--~n~~~~~l~ 184 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGA--VIYK--IECLNAYFRGICKKESSVVEFILNCGIPD--ENDVKLDLY 184 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHHCCC--CCCC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcc--cccccchhh
Confidence 456778999999999 999999999998874 5544 34589999999999999999999988642 2222
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhh
Q 028517 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAST 157 (208)
Q Consensus 78 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~ 157 (208)
+..+.+++|.|...++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..
T Consensus 185 ~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~ 264 (437)
T PHA02795 185 KIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDR 264 (437)
T ss_pred hhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 23477899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC--------HHHHHHHHHcCCCCCCCC
Q 028517 158 GN--------SALCELLIEEGAEVDATD 177 (208)
Q Consensus 158 ~~--------~~~~~~Ll~~~~~~~~~~ 177 (208)
|+ .+++++|+++|++++...
T Consensus 265 g~~~~~~~~~~eIvelLL~~gadI~~~~ 292 (437)
T PHA02795 265 GSVIARRETHLKILEILLREPLSIDCIK 292 (437)
T ss_pred CCcccccccHHHHHHHHHhCCCCCCchh
Confidence 84 699999999999887644
No 41
>PHA02917 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.2e-25 Score=182.45 Aligned_cols=196 Identities=16% Similarity=0.110 Sum_probs=157.7
Q ss_pred CcccccccCcHHHHHHHHcCChHHH----HHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhccccccccccc
Q 028517 2 DMDIDQTIKDKDLFKAAETGDSSTF----KSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAV 77 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~~----~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~ 77 (208)
+.+..+..+.|||+.|+..|+.+.+ +.|++... ..+.. ...++++.|+..|+.+++++|++.|++ ++..
T Consensus 60 ~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~--~~n~~--~~~~~~~~a~~~~~~e~vk~Ll~~Gad---in~~ 132 (661)
T PHA02917 60 NPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATG--YSNIN--DFNIFSYMKSKNVDVDLIKVLVEHGFD---LSVK 132 (661)
T ss_pred CccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccC--CCCCC--CcchHHHHHhhcCCHHHHHHHHHcCCC---CCcc
Confidence 4456677889999999999996655 45554331 12222 123677889999999999999999887 6778
Q ss_pred CCCCCcHHHHH--HhcCCHHHHHHHHhCCCCCCCCCC---CC-----------chHHHHHHH-----------cCCHHHH
Q 028517 78 DEEGWAPIHSA--ASIGNVTIVEMLLSKGADVNLKND---GG-----------RTALHYAAS-----------KGWLKIV 130 (208)
Q Consensus 78 ~~~~~~~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~---~~-----------~~~l~~a~~-----------~~~~~~~ 130 (208)
+..|.|||+.+ ...|+.+++++|+++|++++.++. .| .||+|+|+. .++.+++
T Consensus 133 d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv 212 (661)
T PHA02917 133 CENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVV 212 (661)
T ss_pred CCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHH
Confidence 88999999954 457899999999999999976543 23 599999986 4588999
Q ss_pred HHHHHcCCCCCCCCCCCCcHHHHHHhhCCH--HHHHHHHHcCCCCC----CCCCCCCCHHHHHHHhC---------Cccc
Q 028517 131 ELLISRGAKINSKDKVGCTALHRGASTGNS--ALCELLIEEGAEVD----ATDKAGQTPLMNAVICY---------NKEF 195 (208)
Q Consensus 131 ~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~--~~~~~Ll~~~~~~~----~~~~~g~t~l~~A~~~~---------~~~~ 195 (208)
++|+++|++++..|..|.||||+|+..|+. +++++|++ |++.+ ..+..|.+|+++|+..+ ..++
T Consensus 213 ~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~i 291 (661)
T PHA02917 213 KCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDL 291 (661)
T ss_pred HHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHH
Confidence 999999999999999999999999999985 79999975 87764 45677889999999522 6789
Q ss_pred cccccccccc
Q 028517 196 SGCSSSNKTW 205 (208)
Q Consensus 196 ~~~l~~~~~~ 205 (208)
+++|++.+..
T Consensus 292 v~~Li~~Ga~ 301 (661)
T PHA02917 292 VKLFLENGKP 301 (661)
T ss_pred HHHHHhCCCC
Confidence 9999998864
No 42
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.94 E-value=2.3e-26 Score=191.16 Aligned_cols=195 Identities=23% Similarity=0.208 Sum_probs=145.0
Q ss_pred CcccccccCcHHHH-HHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC---CHHHHHHHHhcccccc---c-
Q 028517 2 DMDIDQTIKDKDLF-KAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG---HPEVVEILLSVDESAN---V- 73 (208)
Q Consensus 2 ~~~~~~~~~~~~l~-~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~~~~ll~~~~~~~---~- 73 (208)
+++..|..|+++|| .|+..++.++++.|++.+. .+..|.||||.|+..+ ...+++++...+.... .
T Consensus 44 ~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~------~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~ 117 (743)
T TIGR00870 44 NINCPDRLGRSALFVAAIENENLELTELLLNLSC------RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA 117 (743)
T ss_pred CCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC------CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence 34555667777777 6666677777777765441 4566777777776621 1123333333221100 0
Q ss_pred ---ccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCC--------------CCCchHHHHHHHcCCHHHHHHHHHc
Q 028517 74 ---VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN--------------DGGRTALHYAASKGWLKIVELLISR 136 (208)
Q Consensus 74 ---~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~ll~~ 136 (208)
.......|.||||.|+..++.++++.|+++|++++.++ ..|.+|++.|+..++.+++++|+++
T Consensus 118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED 197 (743)
T ss_pred ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence 01122468999999999999999999999999988653 2588999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHhhC---------CHHHHHHHHHcCCCC-------CCCCCCCCCHHHHHHHhCCcccccccc
Q 028517 137 GAKINSKDKVGCTALHRGASTG---------NSALCELLIEEGAEV-------DATDKAGQTPLMNAVICYNKEFSGCSS 200 (208)
Q Consensus 137 ~~~~~~~~~~~~t~l~~A~~~~---------~~~~~~~Ll~~~~~~-------~~~~~~g~t~l~~A~~~~~~~~~~~l~ 200 (208)
|++++..|..|+||||.|+..+ ...+.+++++.+++. +..|.+|.||+++|+..|+.++++.|+
T Consensus 198 gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL 277 (743)
T TIGR00870 198 PADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKL 277 (743)
T ss_pred CcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHH
Confidence 9999999999999999999886 234566676665544 667999999999999999999999999
Q ss_pred cc
Q 028517 201 SN 202 (208)
Q Consensus 201 ~~ 202 (208)
+.
T Consensus 278 ~~ 279 (743)
T TIGR00870 278 AI 279 (743)
T ss_pred HH
Confidence 83
No 43
>PHA02792 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.9e-25 Score=176.70 Aligned_cols=204 Identities=20% Similarity=0.160 Sum_probs=165.3
Q ss_pred cccccccCcHHHHHHHHcC-------ChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC--CHHHHHHHHhcccc---
Q 028517 3 MDIDQTIKDKDLFKAAETG-------DSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG--HPEVVEILLSVDES--- 70 (208)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g-------~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~ll~~~~~--- 70 (208)
+|.++..|.|+||+|+..+ +.|+++.|++.+ .+++..|..|.||||+|+.+. +.|+++.|+....+
T Consensus 168 i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g--~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 168 TDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHE--KEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred cccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCC--CCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccc
Confidence 4577888999999999999 899999999877 477788999999999999999 77888888751000
Q ss_pred -------------------cc---------------c-------------------------------------------
Q 028517 71 -------------------AN---------------V------------------------------------------- 73 (208)
Q Consensus 71 -------------------~~---------------~------------------------------------------- 73 (208)
.+ +
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence 00 0
Q ss_pred ------ccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCC--chHHHHHHHcCCH---HHHHHHHHcCCCCCC
Q 028517 74 ------VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGG--RTALHYAASKGWL---KIVELLISRGAKINS 142 (208)
Q Consensus 74 ------~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~--~~~l~~a~~~~~~---~~~~~ll~~~~~~~~ 142 (208)
..........+++.|+..++.+++++|+++|++++.+|..| .||+|.|...... +++++++++|++++.
T Consensus 326 ~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~ 405 (631)
T PHA02792 326 CMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINK 405 (631)
T ss_pred HHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccc
Confidence 00000123456778889999999999999999999888764 6899987776654 457888999999999
Q ss_pred CCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH---h-------CCccccccccccccccCC
Q 028517 143 KDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVI---C-------YNKEFSGCSSSNKTWSGC 208 (208)
Q Consensus 143 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~---~-------~~~~~~~~l~~~~~~~~~ 208 (208)
+|..|.||||.|+..++.+++++|+++|++++.++..|.||+++|+. . ...++++.|+++++...|
T Consensus 406 kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~~ 481 (631)
T PHA02792 406 IDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIEC 481 (631)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChhH
Confidence 99999999999999999999999999999999999999999999976 2 225668888888876543
No 44
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93 E-value=8.8e-27 Score=158.56 Aligned_cols=191 Identities=26% Similarity=0.290 Sum_probs=152.8
Q ss_pred CcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHH
Q 028517 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAA 89 (208)
Q Consensus 10 ~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~ 89 (208)
|-..++.++-+|+.+.+...+.++ ..-+..+--+.+|+.+++..-+++....+.+. .++..|+.|.|||.+|+
T Consensus 96 g~~~~~v~ap~~s~~k~sttltN~--~rgnevs~~p~s~~slsVhql~L~~~~~~~~n-----~VN~~De~GfTpLiWAa 168 (296)
T KOG0502|consen 96 GWSALLVAAPCGSVDKVSTTLTNG--ARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN-----KVNACDEFGFTPLIWAA 168 (296)
T ss_pred hhhhhhhcCCCCCcceeeeeeccc--ccCCccccccCChhhHHHHHHHHHHHHHHhhc-----cccCccccCchHhHHHH
Confidence 444444444555444444444433 12222334455666666666666655554431 27888999999999999
Q ss_pred hcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHc
Q 028517 90 SIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE 169 (208)
Q Consensus 90 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 169 (208)
..|+++++++|++.|++++...+...+.|..|+..|..++++.|+.++.|+|..|-+|-|||-+|++.|+..+++.|++.
T Consensus 169 a~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s 248 (296)
T KOG0502|consen 169 AKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS 248 (296)
T ss_pred hcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhc
Confidence 99999999999999999999998999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHhCCccccccccccccccCC
Q 028517 170 GAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWSGC 208 (208)
Q Consensus 170 ~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~ 208 (208)
|+|++.-+..|++++..|+..|+- +|+-.+++...+.|
T Consensus 249 GAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~ 286 (296)
T KOG0502|consen 249 GADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLC 286 (296)
T ss_pred CCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHh
Confidence 999999999999999999999998 77777766655544
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.93 E-value=9.6e-27 Score=192.67 Aligned_cols=198 Identities=32% Similarity=0.430 Sum_probs=141.9
Q ss_pred ccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcC-CHHHHHHHHhcccccccccccCCCCCcH
Q 028517 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCG-HPEVVEILLSVDESANVVNAVDEEGWAP 84 (208)
Q Consensus 6 ~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g-~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 84 (208)
+...+-++||.|+..++...++.+++.+ .+.+..+..|+||+|.|+..| ..+....+++.+.+ .+.....|.||
T Consensus 403 ~gk~gvTplh~aa~~~~~~~v~l~l~~g--A~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~---~n~~s~~G~T~ 477 (1143)
T KOG4177|consen 403 AGKNGVTPLHVAAHYGNPRVVKLLLKRG--ASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGAD---PNAVSKQGFTP 477 (1143)
T ss_pred CCCCCcceeeehhhccCcceEEEEeccC--CChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCC---cchhccccCcc
Confidence 3334444444444444444444444422 244444555566666666666 55555555554444 44455566666
Q ss_pred HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHH
Q 028517 85 IHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCE 164 (208)
Q Consensus 85 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~ 164 (208)
||.|...|+.++++.+++.++..+.....+.+++|.+...+...+++.++++|++.+.++..+.||||.||.+|+..+|+
T Consensus 478 Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~Vk 557 (1143)
T KOG4177|consen 478 LHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVK 557 (1143)
T ss_pred hhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHH
Confidence 66666666666666666666655555566666677666666777777777777888888889999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccccccccCC
Q 028517 165 LLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWSGC 208 (208)
Q Consensus 165 ~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~~ 208 (208)
+|+++|+|.+.+++.|+||||.|+..|..++++.|.++++..+|
T Consensus 558 fLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna 601 (1143)
T KOG4177|consen 558 FLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA 601 (1143)
T ss_pred HhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999999987764
No 46
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.93 E-value=1.5e-24 Score=148.69 Aligned_cols=142 Identities=23% Similarity=0.286 Sum_probs=120.4
Q ss_pred ccCCCCCCchHHHHHHhcCCH----HHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHH---HHHHHHhCCCCCCCC
Q 028517 38 LSLRNDDDRTLLHVAASCGHP----EVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVT---IVEMLLSKGADVNLK 110 (208)
Q Consensus 38 ~~~~~~~g~t~L~~A~~~g~~----~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~---~~~~Ll~~~~~~~~~ 110 (208)
....+..+.++||.||..|+. +++++|.+.+.. ++..+..|.||||+|+..|+.+ ++++|+++|++++.+
T Consensus 13 ~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~---~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~ 89 (166)
T PHA02743 13 AVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHL---LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR 89 (166)
T ss_pred HhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh---hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC
Confidence 334566788899999999998 455566655443 5677888999999999988765 488999999999998
Q ss_pred C-CCCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCC
Q 028517 111 N-DGGRTALHYAASKGWLKIVELLIS-RGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQT 182 (208)
Q Consensus 111 ~-~~~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t 182 (208)
+ ..|.||||+|+..++.+++++|+. .|++++..+..|.||||+|+..++.+++++|+++|++.+.++..|.+
T Consensus 90 d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 90 ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence 8 589999999999999999999995 79999999999999999999999999999999999999998877754
No 47
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92 E-value=9.2e-25 Score=171.44 Aligned_cols=197 Identities=26% Similarity=0.310 Sum_probs=172.9
Q ss_pred CcccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCC
Q 028517 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~ 81 (208)
..+.+|.++.+.||+|+..|+.++++.|++... .....+..|.+|||+|++.|+.++++.++..+.. .+..+..|
T Consensus 41 s~n~qd~~gfTalhha~Lng~~~is~llle~ea--~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~---~na~~~e~ 115 (854)
T KOG0507|consen 41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEA--LLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDI---LNAVNIEN 115 (854)
T ss_pred cccccCccchhHHHHHHhcCchHHHHHHhcchh--hhhhhhccCcceEEehhhcCcchHHHHHHhcccC---CCcccccC
Confidence 356788999999999999999999999998663 3444568899999999999999999999987633 67777899
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCC--------CCCCCCCCcHHHH
Q 028517 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKI--------NSKDKVGCTALHR 153 (208)
Q Consensus 82 ~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~--------~~~~~~~~t~l~~ 153 (208)
.||||.|++.|+.+++.+|+++++++-.++..+.|++..|++.|..++++.|++...+. ..++..+.+|||+
T Consensus 116 ~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHl 195 (854)
T KOG0507|consen 116 ETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHL 195 (854)
T ss_pred cCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcch
Confidence 99999999999999999999999999999999999999999999999999998763221 2344567889999
Q ss_pred HHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccccc
Q 028517 154 GASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 154 A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
|.++|+.++++.|++.|.|++..... .|+||.|+.+|..++|+.|+.-+.
T Consensus 196 aakngh~~~~~~ll~ag~din~~t~~-gtalheaalcgk~evvr~ll~~gi 245 (854)
T KOG0507|consen 196 AAKNGHVECMQALLEAGFDINYTTED-GTALHEAALCGKAEVVRFLLEIGI 245 (854)
T ss_pred hhhcchHHHHHHHHhcCCCccccccc-chhhhhHhhcCcchhhhHHHhhcc
Confidence 99999999999999999999887764 479999999999999999987553
No 48
>PHA02741 hypothetical protein; Provisional
Probab=99.92 E-value=3.2e-24 Score=147.73 Aligned_cols=134 Identities=25% Similarity=0.344 Sum_probs=88.4
Q ss_pred hccCCCCCCchHHHHHHhcCCHHHHHHHHhcc---cccccccccCCCCCcHHHHHHhcCC----HHHHHHHHhCCCCCCC
Q 028517 37 SLSLRNDDDRTLLHVAASCGHPEVVEILLSVD---ESANVVNAVDEEGWAPIHSAASIGN----VTIVEMLLSKGADVNL 109 (208)
Q Consensus 37 ~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~---~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~~~~~~~ 109 (208)
.+..++..|.||||+|+..|+.++++.|+... .....++..+..|.||||.|+..++ .+++++|++.|++++.
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~ 92 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA 92 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC
Confidence 34455667777777777777777777764321 0111245566667777777777766 4666777777777766
Q ss_pred CCC-CCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcC
Q 028517 110 KND-GGRTALHYAASKGWLKIVELLIS-RGAKINSKDKVGCTALHRGASTGNSALCELLIEEG 170 (208)
Q Consensus 110 ~~~-~~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~ 170 (208)
++. .|.||||+|+..++.+++++|+. .|++++..+..|.|||+.|+..++.+++++|++.+
T Consensus 93 ~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 93 QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 664 67777777777777777777775 36676666677777777777777777777776654
No 49
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.92 E-value=3.3e-24 Score=147.06 Aligned_cols=132 Identities=24% Similarity=0.295 Sum_probs=118.6
Q ss_pred cccCCCCCcHHHHHHhcCCH----HHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHH---HHHHHHHcCCCCCCCC-CC
Q 028517 75 NAVDEEGWAPIHSAASIGNV----TIVEMLLSKGADVNLKNDGGRTALHYAASKGWLK---IVELLISRGAKINSKD-KV 146 (208)
Q Consensus 75 ~~~~~~~~~~l~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~---~~~~ll~~~~~~~~~~-~~ 146 (208)
+..+..+.++||.|++.|+. +++++|++.+..++.+|..|.||+|+|+..++.+ ++++|+++|++++.++ ..
T Consensus 14 ~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~ 93 (166)
T PHA02743 14 VEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGT 93 (166)
T ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCC
Confidence 34556778899999999998 6666788899999989999999999999998765 4899999999999998 48
Q ss_pred CCcHHHHHHhhCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhCCcccccccccccccc
Q 028517 147 GCTALHRGASTGNSALCELLIE-EGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 147 ~~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
|.||||+|+..++.+++++|+. .|++++.++..|.||+|+|+..++.+++++|+++++..
T Consensus 94 g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~ 154 (166)
T PHA02743 94 GNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVC 154 (166)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999995 79999999999999999999999999999999987654
No 50
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91 E-value=6.1e-24 Score=176.72 Aligned_cols=177 Identities=25% Similarity=0.283 Sum_probs=147.4
Q ss_pred ccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHH-HHHhcCCHHHHHHHHhcccccccccccCCCCCcHHH
Q 028517 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLH-VAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (208)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~-~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~ 86 (208)
...+..++.|++.|+.+.++.+++...+.+.+..|..|+|||| .|+..++.++++.|++.+. .+..|.||||
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-------~~~~G~T~Lh 87 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-------RGAVGDTLLH 87 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-------CCCcChHHHH
Confidence 3457899999999999999999987444677788899999999 8889999999999997654 4568999999
Q ss_pred HHHhc---CCHHHHHHHHhCCCCC----------CCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC---------
Q 028517 87 SAASI---GNVTIVEMLLSKGADV----------NLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD--------- 144 (208)
Q Consensus 87 ~a~~~---~~~~~~~~Ll~~~~~~----------~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~--------- 144 (208)
.|+.. +...++..+...+... ......|.||||+|+..|+.++++.|+++|++++..+
T Consensus 88 ~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~ 167 (743)
T TIGR00870 88 AISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQ 167 (743)
T ss_pred HHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCC
Confidence 99873 2234445555544221 1123469999999999999999999999999988643
Q ss_pred -----CCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Q 028517 145 -----KVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICY 191 (208)
Q Consensus 145 -----~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~ 191 (208)
..|.|||+.|+..|+.+++++|+++|+|++..|..|.||+|+|+..+
T Consensus 168 ~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 168 GVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMEN 219 (743)
T ss_pred CCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhh
Confidence 25889999999999999999999999999999999999999999986
No 51
>PHA02792 ankyrin-like protein; Provisional
Probab=99.91 E-value=9.4e-24 Score=167.15 Aligned_cols=202 Identities=13% Similarity=0.063 Sum_probs=162.7
Q ss_pred CcccccccCcHHHHHHHH-cCChHHHHHHHHHhhhh----------------------------------hccCCCCCCc
Q 028517 2 DMDIDQTIKDKDLFKAAE-TGDSSTFKSLSKQQLLK----------------------------------SLSLRNDDDR 46 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~-~g~~~~~~~l~~~~~~~----------------------------------~~~~~~~~g~ 46 (208)
|++..+..+.+++++|+. .++.|++++|++.+... ..+..+..|.
T Consensus 97 dvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~ 176 (631)
T PHA02792 97 EINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGK 176 (631)
T ss_pred CcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCC
Confidence 455566678888899966 69999999999876310 1124566799
Q ss_pred hHHHHHHhcC-------CHHHHHHHHhcccccccccccCCCCCcHHHHHHhcC--CHHHHHHHHhCCCC-----------
Q 028517 47 TLLHVAASCG-------HPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIG--NVTIVEMLLSKGAD----------- 106 (208)
Q Consensus 47 t~L~~A~~~g-------~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~Ll~~~~~----------- 106 (208)
||||+|+.++ +.|+++.|++.|+. ++..+..|.||||.|+... ..++++.|++..-.
T Consensus 177 t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~---~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y 253 (631)
T PHA02792 177 TVLYYYIITRSQDGYATSLDVINYLISHEKE---MRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNY 253 (631)
T ss_pred chHHHHHhhCCcccccCCHHHHHHHHhCCCC---cCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHH
Confidence 9999999999 89999999998877 6778889999999999988 78888888874221
Q ss_pred ------------------------------------------------------------------------------CC
Q 028517 107 ------------------------------------------------------------------------------VN 108 (208)
Q Consensus 107 ------------------------------------------------------------------------------~~ 108 (208)
.+
T Consensus 254 ~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~ 333 (631)
T PHA02792 254 LRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGAT 333 (631)
T ss_pred HHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCc
Confidence 00
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC--CcHHHHHHhhCCH---HHHHHHHHcCCCCCCCCCCCCCH
Q 028517 109 LKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVG--CTALHRGASTGNS---ALCELLIEEGAEVDATDKAGQTP 183 (208)
Q Consensus 109 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--~t~l~~A~~~~~~---~~~~~Ll~~~~~~~~~~~~g~t~ 183 (208)
.-.......++.|+..++.+++++|+++|++++.+|..| .||||.|...... +++++|+++|+|++.+|..|.||
T Consensus 334 ~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TP 413 (631)
T PHA02792 334 LYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSI 413 (631)
T ss_pred cccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcch
Confidence 000112456777888999999999999999999888765 6899988776654 46888999999999999999999
Q ss_pred HHHHHHhCCcccccccccccccc
Q 028517 184 LMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 184 l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
||+|+..++.+++++|+++++..
T Consensus 414 Lh~Aa~~~n~eivelLLs~GADI 436 (631)
T PHA02792 414 LYYCIESHSVSLVEWLIDNGADI 436 (631)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999999988754
No 52
>PHA02741 hypothetical protein; Provisional
Probab=99.91 E-value=3.3e-23 Score=142.68 Aligned_cols=130 Identities=26% Similarity=0.327 Sum_probs=115.1
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHh------CCCCCCCCCCCCchHHHHHHHcCC----HHHHHHHHHcCCCCCCC
Q 028517 74 VNAVDEEGWAPIHSAASIGNVTIVEMLLS------KGADVNLKNDGGRTALHYAASKGW----LKIVELLISRGAKINSK 143 (208)
Q Consensus 74 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~------~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~ 143 (208)
++..+..|.||||.|++.|+.++++.|+. .|.+++.+|..|.||||+|+..++ .+++++|+++|++++.+
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence 34556789999999999999999998854 357788889999999999999998 58889999999999988
Q ss_pred CC-CCCcHHHHHHhhCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhCCccccccccccc
Q 028517 144 DK-VGCTALHRGASTGNSALCELLIE-EGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNK 203 (208)
Q Consensus 144 ~~-~~~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~ 203 (208)
+. .|.||||+|+..++.+++++|+. .|++++..|.+|.|||++|+..++.+++++|.+..
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 85 89999999999999999999997 59999999999999999999999999999998753
No 53
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91 E-value=3.3e-24 Score=155.87 Aligned_cols=181 Identities=30% Similarity=0.387 Sum_probs=152.3
Q ss_pred CChHHHHHHHHHhh-------hhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhc--
Q 028517 21 GDSSTFKSLSKQQL-------LKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASI-- 91 (208)
Q Consensus 21 g~~~~~~~l~~~~~-------~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~-- 91 (208)
-+.+.|...+..+. .-..+..|.+|+|+||||..++++++++.|++.+-. .+...+..|+||++.++..
T Consensus 237 a~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC--~VD~qNrAGYtpiMLaALA~l 314 (452)
T KOG0514|consen 237 SDPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVC--DVDQQNRAGYTPVMLAALAKL 314 (452)
T ss_pred CCHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcc--cccccccccccHHHHHHHHhh
Confidence 35566666665442 224567799999999999999999999999986654 3888899999999987543
Q ss_pred ---CCHHHHHHHHhCCCCCCCCCC-CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHH
Q 028517 92 ---GNVTIVEMLLSKGADVNLKND-GGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 167 (208)
Q Consensus 92 ---~~~~~~~~Ll~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 167 (208)
...+++..|.+.| +++.+-. .|.|.|++|+..|+.++++.|+..|+|+|.+|.+|.|+|+.|+.+|+.|+++.|+
T Consensus 315 k~~~d~~vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLL 393 (452)
T KOG0514|consen 315 KQPADRTVVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLL 393 (452)
T ss_pred cchhhHHHHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHh
Confidence 4677888888875 3444433 7999999999999999999999999999999999999999999999999999999
Q ss_pred Hc-CCCCCCCCCCCCCHHHHHHHhCCcccccccccccc
Q 028517 168 EE-GAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 168 ~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
.. +.|..+.|.+|.|+|.+|...|+.||--.|+.+-.
T Consensus 394 A~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~n 431 (452)
T KOG0514|consen 394 AVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAHMN 431 (452)
T ss_pred ccCcccceeecCCCchhhhhHHhcCchHHHHHHHHHHH
Confidence 77 78999999999999999999999999888877543
No 54
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.91 E-value=2.4e-23 Score=153.36 Aligned_cols=158 Identities=19% Similarity=0.187 Sum_probs=129.7
Q ss_pred cCCCCCCch-HHHHHHhcCCHHHHHHHHhcccccccccc-cCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCC-CCCCc
Q 028517 39 SLRNDDDRT-LLHVAASCGHPEVVEILLSVDESANVVNA-VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLK-NDGGR 115 (208)
Q Consensus 39 ~~~~~~g~t-~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~-~~~~~ 115 (208)
..+|..+.| +||.|+..|+.+++++|++.|+++..... .+..|.||||.|+..++.+++++|+++|++++.+ +..|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 345555554 67777888999999999999987532211 2458999999999999999999999999999986 45799
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccc
Q 028517 116 TALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEF 195 (208)
Q Consensus 116 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~ 195 (208)
||+|.|+..++.+++++|+.+|++++.++..|.||++.|+..++.+++..+... ..+..+.+|.+++ ++.|+
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~n~ei 177 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN-----EISNFYKHPKKIL---INFDI 177 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC-----cccccccChhhhh---ccHHH
Confidence 999999999999999999999999999999999999999998888887666532 2355677888875 47889
Q ss_pred ccccccccc
Q 028517 196 SGCSSSNKT 204 (208)
Q Consensus 196 ~~~l~~~~~ 204 (208)
++.|+++..
T Consensus 178 ~~~Lish~v 186 (300)
T PHA02884 178 LKILVSHFI 186 (300)
T ss_pred HHHHHHHHH
Confidence 999988765
No 55
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.91 E-value=2.1e-23 Score=141.76 Aligned_cols=138 Identities=19% Similarity=0.212 Sum_probs=107.4
Q ss_pred hccCCCCCCchHHHHHHhcCCHHHHHHHHhc--ccccccccccCCCCCcHHHHHHhcCCH---HHHHHHHhCCCCCCCCC
Q 028517 37 SLSLRNDDDRTLLHVAASCGHPEVVEILLSV--DESANVVNAVDEEGWAPIHSAASIGNV---TIVEMLLSKGADVNLKN 111 (208)
Q Consensus 37 ~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~--~~~~~~~~~~~~~~~~~l~~a~~~~~~---~~~~~Ll~~~~~~~~~~ 111 (208)
.....+..|.||||+|+..|+.+.+...... ...+......+..|.||||+|+..++. +++++|++.|++++.++
T Consensus 9 ~~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~ 88 (154)
T PHA02736 9 FASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE 88 (154)
T ss_pred HHHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence 3445678899999999999984322211111 111222345677899999999998876 46888999999998887
Q ss_pred -CCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCC
Q 028517 112 -DGGRTALHYAASKGWLKIVELLISR-GAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 174 (208)
Q Consensus 112 -~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 174 (208)
..|.||||+|+..++.+++++|+.+ |++++..+..|.|||++|+..|+.+++++|+++|++.+
T Consensus 89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4899999999999999999999874 88888888899999999999999999999999888764
No 56
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91 E-value=8.5e-25 Score=148.93 Aligned_cols=193 Identities=24% Similarity=0.332 Sum_probs=168.2
Q ss_pred cccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHH
Q 028517 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (208)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~ 86 (208)
+..++..+-.+.+.|+.++......-.. ..+...+..|.++++.++-+|+.+..+..+..++. .+..+..+.+|+.
T Consensus 59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~-~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~r---gnevs~~p~s~~s 134 (296)
T KOG0502|consen 59 NALGESLLTVAVRSGNSDVAVQSAQLDP-DAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGAR---GNEVSLMPWSPLS 134 (296)
T ss_pred HhcCCcccchhhhcCCcHHHHHhhccCC-CCCCCCCchhhhhhhhcCCCCCcceeeeeeccccc---CCccccccCChhh
Confidence 4456777788899999999888865442 23334466799999999999999999999877766 4566678899999
Q ss_pred HHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 028517 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (208)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 166 (208)
+++-.-+.+....+.+. .++..|..|.|||.||+..|++.++++|++.|++++...+...++|.+|++.|..++|++|
T Consensus 135 lsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lL 212 (296)
T KOG0502|consen 135 LSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELL 212 (296)
T ss_pred HHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHH
Confidence 99988888888777766 5677899999999999999999999999999999999989999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHhCCccccccccccccc
Q 028517 167 IEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTW 205 (208)
Q Consensus 167 l~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~ 205 (208)
++.+.|++..|.+|.|||-||++.++.++++.|+..++.
T Consensus 213 L~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd 251 (296)
T KOG0502|consen 213 LTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGAD 251 (296)
T ss_pred HhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999988764
No 57
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.90 E-value=2.4e-23 Score=151.41 Aligned_cols=163 Identities=27% Similarity=0.359 Sum_probs=146.2
Q ss_pred cccccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhc-----CCHHHHHHHHhccccccccccc
Q 028517 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASC-----GHPEVVEILLSVDESANVVNAV 77 (208)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~-----g~~~~~~~ll~~~~~~~~~~~~ 77 (208)
+++.|..|+|+||||+.-+|+++|+.|++.+ ..+....+.-|+||+++++.. .+.+++..|+..|.- ..+.
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSg-vC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnV---NaKA 336 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSG-VCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDV---NAKA 336 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccC-cccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCc---chhh
Confidence 4778999999999999999999999999998 678888899999999999853 467888889876642 3344
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHh
Q 028517 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR-GAKINSKDKVGCTALHRGAS 156 (208)
Q Consensus 78 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~A~~ 156 (208)
...|+|+|+.|++.|+.++++.|+..|++++.+|.+|.|.|++|+..|+.+++++|+.. +++...+|.+|.|+|..|..
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAle 416 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALE 416 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHh
Confidence 56899999999999999999999999999999999999999999999999999999966 78899999999999999999
Q ss_pred hCCHHHHHHHHHc
Q 028517 157 TGNSALCELLIEE 169 (208)
Q Consensus 157 ~~~~~~~~~Ll~~ 169 (208)
.|+.||.-+|..+
T Consensus 417 agh~eIa~mlYa~ 429 (452)
T KOG0514|consen 417 AGHREIAVMLYAH 429 (452)
T ss_pred cCchHHHHHHHHH
Confidence 9999998777654
No 58
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.89 E-value=3.2e-23 Score=162.90 Aligned_cols=195 Identities=26% Similarity=0.272 Sum_probs=171.3
Q ss_pred CcHHHHHHHHcCChHHHHHHHHHhh-----------hhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccC
Q 028517 10 KDKDLFKAAETGDSSTFKSLSKQQL-----------LKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVD 78 (208)
Q Consensus 10 ~~~~l~~a~~~g~~~~~~~l~~~~~-----------~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~ 78 (208)
....+..|++.|+++.+..+++... ..+.+..|.+|.|.||.|+..|+.++.+.|++..+. +...+
T Consensus 3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~---ldl~d 79 (854)
T KOG0507|consen 3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL---LDLCD 79 (854)
T ss_pred hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh---hhhhh
Confidence 4567899999999999999997432 234456788999999999999999999999987665 44455
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhC
Q 028517 79 EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTG 158 (208)
Q Consensus 79 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~ 158 (208)
..|.+|||+|++.|+.++++.++.++..++..+..|.+|+|.+++.++.+++++|+.+|++.-..++.+.|++.+|++.|
T Consensus 80 ~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfg 159 (854)
T KOG0507|consen 80 TKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFG 159 (854)
T ss_pred ccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhh
Confidence 78999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCC--------CCCCCCCCCCHHHHHHHhCCccccccccccccccC
Q 028517 159 NSALCELLIEEGAE--------VDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWSG 207 (208)
Q Consensus 159 ~~~~~~~Ll~~~~~--------~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~ 207 (208)
..++++.|++.... -..++..+-+|+|.|+.+|+.++++.|++.+..+|
T Consensus 160 r~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din 216 (854)
T KOG0507|consen 160 RAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDIN 216 (854)
T ss_pred hhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcc
Confidence 99999999976221 12345578889999999999999999999887654
No 59
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.89 E-value=4.2e-23 Score=140.26 Aligned_cols=133 Identities=24% Similarity=0.257 Sum_probs=111.4
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCC-----CCCCCCCCchHHHHHHHcCCHH---HHHHHHHcCCCCCCCCC
Q 028517 74 VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGAD-----VNLKNDGGRTALHYAASKGWLK---IVELLISRGAKINSKDK 145 (208)
Q Consensus 74 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~~~~l~~a~~~~~~~---~~~~ll~~~~~~~~~~~ 145 (208)
.+..+..|.||||+|++.|+.+.+........+ ...+|..|.||||+|+..+..+ ++++|+++|++++.++.
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~ 89 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKER 89 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCC
Confidence 566678899999999999984322211111111 2345789999999999999864 68899999999999884
Q ss_pred -CCCcHHHHHHhhCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCCcccccccccccccc
Q 028517 146 -VGCTALHRGASTGNSALCELLIEE-GAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 146 -~~~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
.|.||||+|+..++.+++++|+.+ |++++.++..|.||+++|+..|+.+++++|+++++..
T Consensus 90 ~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 90 VFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 899999999999999999999984 9999999999999999999999999999999988754
No 60
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.89 E-value=4.4e-22 Score=130.98 Aligned_cols=144 Identities=31% Similarity=0.329 Sum_probs=128.8
Q ss_pred hHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCC
Q 028517 47 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGW 126 (208)
Q Consensus 47 t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~ 126 (208)
-.+..|+..+....++.|++..+ ..++.+|..++||||.|+.+|+.++++.|+..|++++.+...|+||||.||..++
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~a--n~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKA--NHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhcc--ccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 34678888899999999998544 4589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC-HHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhCC
Q 028517 127 LKIVELLISRGAKINSKDKVGCTALHRGASTGN-SALCELLIE-EGAEVDATDKAGQTPLMNAVICYN 192 (208)
Q Consensus 127 ~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~-~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~ 192 (208)
.+++..|+++|+|++.......||||+|+...+ ...+++|+. .++++-..+..+.||+++|-+.+-
T Consensus 143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM 210 (228)
T ss_pred hhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence 999999999999999998889999999998765 456677764 589999999999999999998754
No 61
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.89 E-value=5.6e-22 Score=146.20 Aligned_cols=126 Identities=21% Similarity=0.206 Sum_probs=112.5
Q ss_pred cccCCCCC-cHHHHHHhcCCHHHHHHHHhCCCCCCCCC----CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCC
Q 028517 75 NAVDEEGW-APIHSAASIGNVTIVEMLLSKGADVNLKN----DGGRTALHYAASKGWLKIVELLISRGAKINSK-DKVGC 148 (208)
Q Consensus 75 ~~~~~~~~-~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~----~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~ 148 (208)
..++..+. ++|+.|+..++.+++++|+++|++++.++ ..|.||+|+|+..++.+++++|+++|++++.. +..|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 34455555 56778888899999999999999999874 58999999999999999999999999999986 46799
Q ss_pred cHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccc
Q 028517 149 TALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSS 200 (208)
Q Consensus 149 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~ 200 (208)
||||.|+..++.+++++|+.+|++++.++..|.||+++|++.++.+++..+.
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 9999999999999999999999999999999999999999998888765543
No 62
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.88 E-value=3.1e-22 Score=152.04 Aligned_cols=186 Identities=31% Similarity=0.427 Sum_probs=114.5
Q ss_pred HHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcC
Q 028517 13 DLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIG 92 (208)
Q Consensus 13 ~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~ 92 (208)
.+..|++.|+++-+..|+..+ ..++..+.+|.|+||-+|.-.+.++++++++.+++ ++..+..++||+|.|+..|
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~g--a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~---Vn~~d~e~wtPlhaaascg 117 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRG--ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGAN---VNAQDNEGWTPLHAAASCG 117 (527)
T ss_pred HHHhccccccHHHHHHHhccC--CCccccCCccchhHHHHHhcccHHHHHHHHHhcCC---ccccccccCCcchhhcccc
Confidence 456677777777777776554 34466677777777777777777777777777666 6667777777777777777
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCchHHHHHHH--------------cCCH-------------HHHHHHHHcCCCCCCCCC
Q 028517 93 NVTIVEMLLSKGADVNLKNDGGRTALHYAAS--------------KGWL-------------KIVELLISRGAKINSKDK 145 (208)
Q Consensus 93 ~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~--------------~~~~-------------~~~~~ll~~~~~~~~~~~ 145 (208)
+..++.+|+.+|+++...+..|..|...+.- .-.+ ++-+|+ ..|.+.+..+.
T Consensus 118 ~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l-~~G~~~d~~~~ 196 (527)
T KOG0505|consen 118 YLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWL-NAGAELDARHA 196 (527)
T ss_pred cHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHH-hcccccccccc
Confidence 7777777777776655555544433322110 0000 011122 24444444544
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccccc
Q 028517 146 VGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 146 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
.|-|.||.|..+|..++.++|++.|.+++.+|.+|+||||.|+.=|..++.++|++++.
T Consensus 197 rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga 255 (527)
T KOG0505|consen 197 RGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGA 255 (527)
T ss_pred ccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhc
Confidence 56666666666666666666666666666666666666666666666666666666554
No 63
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.86 E-value=3.8e-21 Score=152.64 Aligned_cols=196 Identities=30% Similarity=0.343 Sum_probs=165.2
Q ss_pred cccccCcHHHHHHHHcCChHHHHHHHHHhh-------hhhccCCCCCCchHHHHHHhc---CCHHHHHHHHhcccccccc
Q 028517 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQL-------LKSLSLRNDDDRTLLHVAASC---GHPEVVEILLSVDESANVV 74 (208)
Q Consensus 5 ~~~~~~~~~l~~a~~~g~~~~~~~l~~~~~-------~~~~~~~~~~g~t~L~~A~~~---g~~~~~~~ll~~~~~~~~~ 74 (208)
+.+...+.++..|...+..+.+..++.... ..+++.+-.-|.|.||.|.-. ++.++++.|++..+. .+
T Consensus 96 ~l~~~d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~--li 173 (782)
T KOG3676|consen 96 ILKRFDRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPK--LI 173 (782)
T ss_pred hhhhcchhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHH--Hh
Confidence 344555688999999999999988876442 134455567899999999873 455889999875542 22
Q ss_pred cc----cCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCC---------CC--------------CCchHHHHHHHcCCH
Q 028517 75 NA----VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLK---------ND--------------GGRTALHYAASKGWL 127 (208)
Q Consensus 75 ~~----~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~---------~~--------------~~~~~l~~a~~~~~~ 127 (208)
+. ....|.||||.|+.+.+.+++++|++.|++++.+ |. .|..||..|+..++.
T Consensus 174 nd~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~ 253 (782)
T KOG3676|consen 174 NDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQP 253 (782)
T ss_pred hhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCH
Confidence 22 2346999999999999999999999999997644 11 367899999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHhCCcccccccccc
Q 028517 128 KIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE--VDATDKAGQTPLMNAVICYNKEFSGCSSSN 202 (208)
Q Consensus 128 ~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~--~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~ 202 (208)
+++++|+++|+|++.+|+.|+|.||..+..-..+|..+++++|++ ...+|.+|.|||..|+..|+.+|.+.+++.
T Consensus 254 eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 254 EIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 899999999999999999999999999887
No 64
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.85 E-value=2.9e-20 Score=122.46 Aligned_cols=145 Identities=32% Similarity=0.411 Sum_probs=128.1
Q ss_pred cHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHh
Q 028517 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAAS 90 (208)
Q Consensus 11 ~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~ 90 (208)
...+..|+..|.+..|+.|++.. ..-.+.+|.+|+||||.|+.+|++++++.|+..+++ ...+...|+||||.||.
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~-an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn---~~a~T~~GWTPLhSAck 139 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEK-ANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN---KEAKTNEGWTPLHSACK 139 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhc-cccccccccccccHHHHHHhcCchHHHHHHHHccCC---cccccccCccchhhhhc
Confidence 45678899999999999999887 577889999999999999999999999999999888 56677899999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHH-HHHHHH-HcCCCCCCCCCCCCcHHHHHHhhCC
Q 028517 91 IGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLK-IVELLI-SRGAKINSKDKVGCTALHRGASTGN 159 (208)
Q Consensus 91 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~ll-~~~~~~~~~~~~~~t~l~~A~~~~~ 159 (208)
-.+.+++-+|+++|++++.......||||+++...+.. .+.+|+ ..++.+-.....+.||+..|-+.+-
T Consensus 140 WnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 140 WNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM 210 (228)
T ss_pred ccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence 99999999999999999999999999999999877654 456655 4577777788889999999988764
No 65
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.85 E-value=4.8e-20 Score=120.60 Aligned_cols=122 Identities=46% Similarity=0.688 Sum_probs=85.3
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhC
Q 028517 79 EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTG 158 (208)
Q Consensus 79 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~ 158 (208)
..|.|||+.|+..++.+++++|++.+.....++..|.+|++.|+..+..+++++|++.+..++..+..+.||+|.|+..+
T Consensus 5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~ 84 (126)
T cd00204 5 EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNG 84 (126)
T ss_pred cCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 45667777777777777777777766665666667777777777777777777777776666666666777777777777
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccc
Q 028517 159 NSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSS 200 (208)
Q Consensus 159 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~ 200 (208)
+.+++++|++++.+.+..+..|.||+++|...++.+++++|+
T Consensus 85 ~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 85 NLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 777777777777666666777777777777777777666653
No 66
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.85 E-value=2.5e-20 Score=114.95 Aligned_cols=89 Identities=55% Similarity=0.836 Sum_probs=69.0
Q ss_pred HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHH
Q 028517 85 IHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCE 164 (208)
Q Consensus 85 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~ 164 (208)
||.|++.|+.+++++|++.+.+++. |.||+|+|+..|+.+++++|+++|++++.++.+|.||||.|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 5778888888888888887766655 677888888888888888888888888888888888888888888888888
Q ss_pred HHHHcCCCCCCCC
Q 028517 165 LLIEEGAEVDATD 177 (208)
Q Consensus 165 ~Ll~~~~~~~~~~ 177 (208)
+|+++|++++.+|
T Consensus 77 ~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEHGADVNIRN 89 (89)
T ss_dssp HHHHTTT-TTSS-
T ss_pred HHHHcCCCCCCcC
Confidence 8888888877654
No 67
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.83 E-value=7.5e-19 Score=114.88 Aligned_cols=124 Identities=48% Similarity=0.748 Sum_probs=110.3
Q ss_pred CCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHH
Q 028517 41 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHY 120 (208)
Q Consensus 41 ~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~ 120 (208)
.+..|.||||.|+..++.+++++|+..+.. ....+..|.+|++.|+..++.+++++|++.+...+..+..+.+|+|+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~---~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~ 79 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD---VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHL 79 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC---CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 456789999999999999999999987765 35667789999999999999999999999998888888889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHH
Q 028517 121 AASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 167 (208)
Q Consensus 121 a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 167 (208)
|+..++.+++++|++++.+.+..+..+.||++.|...++.+++++|+
T Consensus 80 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 80 AARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 99999999999999999888888889999999999999999998874
No 68
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.82 E-value=7.6e-20 Score=139.18 Aligned_cols=154 Identities=30% Similarity=0.362 Sum_probs=129.5
Q ss_pred HHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCH
Q 028517 48 LLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWL 127 (208)
Q Consensus 48 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~ 127 (208)
.+.-||..|..+=++.|+..+.. .+..+.+|.|+||.+|...+.+|+++|+++|+.++..|..++||+|.|+..|+.
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~---~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGAS---PNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYL 119 (527)
T ss_pred HHHhccccccHHHHHHHhccCCC---ccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccH
Confidence 47788999999999999988866 477788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC--------------HH------------HHHHHHHcCCCCCCCCCCCC
Q 028517 128 KIVELLISRGAKINSKDKVGCTALHRGASTGN--------------SA------------LCELLIEEGAEVDATDKAGQ 181 (208)
Q Consensus 128 ~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~--------------~~------------~~~~Ll~~~~~~~~~~~~g~ 181 (208)
.++.+|+++|+++...+..|..|...+.-.-. .+ -++..+..|.+.+.++..|-
T Consensus 120 ~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~ 199 (527)
T KOG0505|consen 120 NIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGA 199 (527)
T ss_pred HHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccc
Confidence 99999999999887777777666554331111 11 12222336888899998899
Q ss_pred CHHHHHHHhCCcccccccccccc
Q 028517 182 TPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 182 t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
|++|+|+.+|..++.++|++.+.
T Consensus 200 T~lHvAaa~Gy~e~~~lLl~ag~ 222 (527)
T KOG0505|consen 200 TALHVAAANGYTEVAALLLQAGY 222 (527)
T ss_pred hHHHHHHhhhHHHHHHHHHHhcc
Confidence 99999999999999999998764
No 69
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.81 E-value=5.9e-19 Score=108.77 Aligned_cols=88 Identities=45% Similarity=0.724 Sum_probs=57.9
Q ss_pred HHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHH
Q 028517 49 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLK 128 (208)
Q Consensus 49 L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 128 (208)
||.|+..|+.+++++|++.+.+. +. |.||||+|+..|+.+++++|+++|++++.++..|.||+|+|+..++.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~---~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADI---NL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTT---TS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCC---CC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHH
Confidence 56677777777777777644332 11 566777777777777777777777777776667777777777777777
Q ss_pred HHHHHHHcCCCCCCC
Q 028517 129 IVELLISRGAKINSK 143 (208)
Q Consensus 129 ~~~~ll~~~~~~~~~ 143 (208)
++++|+++|++++.+
T Consensus 74 ~~~~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 74 IVKLLLEHGADVNIR 88 (89)
T ss_dssp HHHHHHHTTT-TTSS
T ss_pred HHHHHHHcCCCCCCc
Confidence 777777777666554
No 70
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-19 Score=128.85 Aligned_cols=137 Identities=37% Similarity=0.483 Sum_probs=121.9
Q ss_pred HHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCC
Q 028517 14 LFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGN 93 (208)
Q Consensus 14 l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 93 (208)
++.-++.|+.-.|+..++.. ..+.+.-|+.|.+|||.||+.|+..+++.|+..|+. ++..+....||||.|+..|+
T Consensus 4 if~wcregna~qvrlwld~t-ehdln~gddhgfsplhwaakegh~aivemll~rgar---vn~tnmgddtplhlaaahgh 79 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLDDT-EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR---VNSTNMGDDTPLHLAAAHGH 79 (448)
T ss_pred hhhhhhcCCeEEEEEEecCc-ccccccccccCcchhhhhhhcccHHHHHHHHhcccc---cccccCCCCcchhhhhhccc
Confidence 45567788888888888766 578888899999999999999999999999988876 66677777899999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 028517 94 VTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRG 154 (208)
Q Consensus 94 ~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A 154 (208)
.++++.|++..++++..+..|+||+|+||..|.-.+.+-|+..|+.++.-++.|.||+..|
T Consensus 80 rdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 80 RDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 9999999999999999999999999999999999999999999999998999999999865
No 71
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=9.6e-20 Score=129.42 Aligned_cols=115 Identities=45% Similarity=0.615 Sum_probs=110.4
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 028517 74 VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHR 153 (208)
Q Consensus 74 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 153 (208)
++..|-.|.+|||+|++.|+..+++.|+.+|+.++..+....||+|.|+..|+.++++.|+++.+|+|..+..|+||||+
T Consensus 27 ln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhy 106 (448)
T KOG0195|consen 27 LNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHY 106 (448)
T ss_pred cccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhh
Confidence 67778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 028517 154 GASTGNSALCELLIEEGAEVDATDKAGQTPLMNAV 188 (208)
Q Consensus 154 A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 188 (208)
||+-|+..+.+-|+..|+.+++-|.+|.||+..|.
T Consensus 107 acfwgydqiaedli~~ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 107 ACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred hhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence 99999999999999999999999999999998764
No 72
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.79 E-value=4.1e-18 Score=135.64 Aligned_cols=168 Identities=22% Similarity=0.261 Sum_probs=141.0
Q ss_pred CcccccccCcHHHHHHHH---cCChHHHHHHHHHhhh--hhcc-CCCCCCchHHHHHHhcCCHHHHHHHHhccccccc--
Q 028517 2 DMDIDQTIKDKDLFKAAE---TGDSSTFKSLSKQQLL--KSLS-LRNDDDRTLLHVAASCGHPEVVEILLSVDESANV-- 73 (208)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~---~g~~~~~~~l~~~~~~--~~~~-~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~-- 73 (208)
+++.+..-|+|.||.|.. .+.-+++..|++-.++ +++. .....|.||||+|+.+.+.+++++|++.|++...
T Consensus 135 ~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa 214 (782)
T KOG3676|consen 135 KLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARA 214 (782)
T ss_pred ccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHh
Confidence 355567789999999997 3444888888876532 2222 2346899999999999999999999998876211
Q ss_pred ----cccc--------------CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHH
Q 028517 74 ----VNAV--------------DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLIS 135 (208)
Q Consensus 74 ----~~~~--------------~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~ 135 (208)
.... -..|..||..|+..++.+++++|+++|++++.+|..|+|.||..+..-..+|..++++
T Consensus 215 ~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~ 294 (782)
T KOG3676|consen 215 CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALE 294 (782)
T ss_pred hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHh
Confidence 0001 1247889999999999999999999999999999999999999999999999999999
Q ss_pred cCCC--CCCCCCCCCcHHHHHHhhCCHHHHHHHHHc
Q 028517 136 RGAK--INSKDKVGCTALHRGASTGNSALCELLIEE 169 (208)
Q Consensus 136 ~~~~--~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 169 (208)
+|+. ....+..|-|||.+|++.|..++++.+++.
T Consensus 295 ~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 295 LGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9999 778899999999999999999999999987
No 73
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.78 E-value=5.4e-19 Score=144.53 Aligned_cols=198 Identities=24% Similarity=0.289 Sum_probs=131.0
Q ss_pred ccccCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHH
Q 028517 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (208)
Q Consensus 6 ~~~~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l 85 (208)
+|..+..++..|+-.|+...|+.|+......+ ...|..+.|+|.+||..|+.++++.|+..+... ..++...+|||
T Consensus 786 rdkkgf~plImaatagh~tvV~~llk~ha~ve-aQsdrtkdt~lSlacsggr~~vvelLl~~gank---ehrnvsDytPl 861 (2131)
T KOG4369|consen 786 RDKKGFVPLIMAATAGHITVVQDLLKAHADVE-AQSDRTKDTMLSLACSGGRTRVVELLLNAGANK---EHRNVSDYTPL 861 (2131)
T ss_pred cccccchhhhhhcccCchHHHHHHHhhhhhhh-hhcccccCceEEEecCCCcchHHHHHHHhhccc---cccchhhcCch
Confidence 44455556666666666666666554442111 123455566666666666666666666555542 23344556666
Q ss_pred HHHHhcCCHHHHHHHHhCCCCCCCCCC--CCchHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHhhCCHHH
Q 028517 86 HSAASIGNVTIVEMLLSKGADVNLKND--GGRTALHYAASKGWLKIVELLISRGAKINSK-DKVGCTALHRGASTGNSAL 162 (208)
Q Consensus 86 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~--~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~t~l~~A~~~~~~~~ 162 (208)
..|...|.+++++.|+.+|.+++.+.. .|..||..|..+|+......|++.|.|+|.. ..+.+|+|-+|+..|..|+
T Consensus 862 sla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~ev 941 (2131)
T KOG4369|consen 862 SLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEV 941 (2131)
T ss_pred hhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchH
Confidence 666666667777777776666665533 4666777777777777777777777776643 3456778888888888888
Q ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccccccccccC
Q 028517 163 CELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWSG 207 (208)
Q Consensus 163 ~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~~ 207 (208)
+..||.+.++...+...|.|||+-++..|..|+=+.|+..++..|
T Consensus 942 v~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~n 986 (2131)
T KOG4369|consen 942 VFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTN 986 (2131)
T ss_pred HHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccc
Confidence 888888888888888888888888888888888888888776543
No 74
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.74 E-value=1.6e-18 Score=141.77 Aligned_cols=192 Identities=26% Similarity=0.306 Sum_probs=173.3
Q ss_pred cCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHH
Q 028517 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (208)
Q Consensus 9 ~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a 88 (208)
.-+++|..|+..|+-|.+..|+..+ .+.+.+|..|.+||.+|+..||..+++.|+...... ....|+.+.|+|.+|
T Consensus 756 n~~t~LT~acaggh~e~vellv~rg--aniehrdkkgf~plImaatagh~tvV~~llk~ha~v--eaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHREEVELLVVRG--ANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADV--EAQSDRTKDTMLSLA 831 (2131)
T ss_pred cccccccccccCccHHHHHHHHHhc--ccccccccccchhhhhhcccCchHHHHHHHhhhhhh--hhhcccccCceEEEe
Confidence 3478999999999999999999876 588889999999999999999999999999865553 566788999999999
Q ss_pred HhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCcHHHHHHhhCCHHHHHHH
Q 028517 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSK--DKVGCTALHRGASTGNSALCELL 166 (208)
Q Consensus 89 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~~t~l~~A~~~~~~~~~~~L 166 (208)
|..|+.+++..|+..|++...++-..+||+.+|...|..+++..|+..|..++.+ .+-|..||.+|..+|+.+.++.|
T Consensus 832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~l 911 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSL 911 (2131)
T ss_pred cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHH
Confidence 9999999999999999998888999999999999999999999999999888866 45689999999999999999999
Q ss_pred HHcCCCCCCCC-CCCCCHHHHHHHhCCcccccccccccc
Q 028517 167 IEEGAEVDATD-KAGQTPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 167 l~~~~~~~~~~-~~g~t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
++.|.|++..- .+-.|+|.+|+..|+.|++..|+...+
T Consensus 912 l~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~a 950 (2131)
T KOG4369|consen 912 LQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQA 950 (2131)
T ss_pred hcccchhccccccccccceeeccccCcchHHHHHHHHhh
Confidence 99999997653 467899999999999999999987543
No 75
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.74 E-value=2.2e-17 Score=97.63 Aligned_cols=104 Identities=35% Similarity=0.486 Sum_probs=91.7
Q ss_pred HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHH
Q 028517 84 PIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALC 163 (208)
Q Consensus 84 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~ 163 (208)
.+.+++++|.++-++..+..|.+++..- .|.+|+|+|+-.|..+++++|+..|++++.+|+.|.|||..|++.|+..+|
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 4678899999999999999887776533 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCHHHHHH
Q 028517 164 ELLIEEGAEVDATDKAGQTPLMNAV 188 (208)
Q Consensus 164 ~~Ll~~~~~~~~~~~~g~t~l~~A~ 188 (208)
++|+++|+|-.....+|.+.+..+-
T Consensus 84 klLL~~GAdrt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 84 KLLLQNGADRTIHAPDGTALIEATE 108 (117)
T ss_pred HHHHHcCcccceeCCCchhHHhhcc
Confidence 9999999999988888988776553
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.71 E-value=4e-17 Score=96.52 Aligned_cols=104 Identities=26% Similarity=0.388 Sum_probs=86.5
Q ss_pred cHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHh
Q 028517 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAAS 90 (208)
Q Consensus 11 ~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~ 90 (208)
+..+..++++|.++.|+.....+. +.+ ....|++|||+|+-+|..+++++|+.+|++ ++.+|+.|.|||-.|+.
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~~g~--nVn-~~~ggR~plhyAAD~GQl~ilefli~iGA~---i~~kDKygITPLLsAvw 76 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVNEGL--NVN-EIYGGRTPLHYAADYGQLSILEFLISIGAN---IQDKDKYGITPLLSAVW 76 (117)
T ss_pred chhHhhhhccCcHHHHHHHHHccc--cHH-HHhCCcccchHhhhcchHHHHHHHHHhccc---cCCccccCCcHHHHHHH
Confidence 466788999999999999987662 333 234889999999999999999999998887 67788899999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCchHHHH
Q 028517 91 IGNVTIVEMLLSKGADVNLKNDGGRTALHY 120 (208)
Q Consensus 91 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~ 120 (208)
.|+.+++++|++.|++-+.+..+|.+.+..
T Consensus 77 EGH~~cVklLL~~GAdrt~~~PdG~~~~ea 106 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGADRTIHAPDGTALIEA 106 (117)
T ss_pred HhhHHHHHHHHHcCcccceeCCCchhHHhh
Confidence 999999999999999888877777776653
No 77
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.71 E-value=8.5e-16 Score=110.56 Aligned_cols=129 Identities=39% Similarity=0.524 Sum_probs=111.8
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCC-----HHHHHHHHHcCC---CCCCCCC
Q 028517 74 VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGW-----LKIVELLISRGA---KINSKDK 145 (208)
Q Consensus 74 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~ll~~~~---~~~~~~~ 145 (208)
....+..+.++++.++..+..+++++++..+.+++.++..|.||+|+|+..++ .++++.|++.|+ ..+..+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~ 145 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE 145 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence 34445567889999999999999999999999888889999999999999998 899999999988 5556688
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccc
Q 028517 146 VGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSN 202 (208)
Q Consensus 146 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~ 202 (208)
.|.||||+|+..|+.++++.|++.|++++.++..|.|+++.|+..++.+++..+...
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~ 202 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK 202 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence 899999999999999999999999999988889999999999999999888888774
No 78
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.66 E-value=7.5e-15 Score=105.62 Aligned_cols=128 Identities=43% Similarity=0.634 Sum_probs=118.0
Q ss_pred CCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCC-----HHHHHHHHhCCC---CCCCCC
Q 028517 40 LRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGN-----VTIVEMLLSKGA---DVNLKN 111 (208)
Q Consensus 40 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~Ll~~~~---~~~~~~ 111 (208)
..+..+.++++.++..+..+++++++..+.+ ++..+..|.||++.|+..++ .++++.|++.|+ ..+.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~ 144 (235)
T COG0666 68 ARDLDGRLPLHSAASKGDDKIVKLLLASGAD---VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD 144 (235)
T ss_pred cCCccccCHHHHHHHcCcHHHHHHHHHcCCC---cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence 3455688999999999999999999987766 57788999999999999999 999999999999 666679
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcC
Q 028517 112 DGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEG 170 (208)
Q Consensus 112 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~ 170 (208)
..|.||+|+|+..|..++++.+++.|++++..+..|.|+++.|+..+..+++..+++.+
T Consensus 145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 145 EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999975
No 79
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.63 E-value=5.1e-16 Score=86.56 Aligned_cols=55 Identities=47% Similarity=0.734 Sum_probs=31.5
Q ss_pred HHHcC-CCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 028517 133 LISRG-AKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNA 187 (208)
Q Consensus 133 ll~~~-~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A 187 (208)
|+++| .+++..|..|.||||+|+..|+.+++++|++.|++++.+|.+|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45666 78888999999999999999999999999988999999999999999987
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.61 E-value=8.6e-15 Score=120.22 Aligned_cols=105 Identities=30% Similarity=0.447 Sum_probs=93.5
Q ss_pred HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHH
Q 028517 84 PIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALC 163 (208)
Q Consensus 84 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~ 163 (208)
.|+.|+..|+.+.++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV 164 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 47788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc-------CCCCCCCCCCCCCHHHHHH
Q 028517 164 ELLIEE-------GAEVDATDKAGQTPLMNAV 188 (208)
Q Consensus 164 ~~Ll~~-------~~~~~~~~~~g~t~l~~A~ 188 (208)
++|+++ |++.+..+..|.+|+..+.
T Consensus 165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 165 QLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 999988 7888877877777766543
No 81
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.59 E-value=1.1e-15 Score=84.83 Aligned_cols=53 Identities=38% Similarity=0.544 Sum_probs=28.0
Q ss_pred CCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccccccc
Q 028517 147 GCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCS 199 (208)
Q Consensus 147 ~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l 199 (208)
|.||+|.|++.|+.+++++|+++|.+++.+|.+|.||+|+|+..|+.+++++|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 34566666666666666666655666655566666666666666666655555
No 82
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.55 E-value=1.2e-13 Score=98.58 Aligned_cols=123 Identities=27% Similarity=0.354 Sum_probs=111.0
Q ss_pred cCcHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHH
Q 028517 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (208)
Q Consensus 9 ~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a 88 (208)
..+.+|..++-.|+.+.+..|+..- ...+.+|..|.|+|..|+..|+.+.++.+++.|++.+ ..++..++|||+.|
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~v--r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN--~~qhg~~YTpLmFA 86 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTV--RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVN--DKQHGTLYTPLMFA 86 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHh--hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcC--cccccccccHHHHH
Confidence 4578999999999999999999764 4678899999999999999999999999999998853 45678899999999
Q ss_pred HhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHH
Q 028517 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLIS 135 (208)
Q Consensus 89 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~ 135 (208)
+.+|+.++.+.|++.|+.+...+.-|.|+-..|+.-|+.+|+..+=+
T Consensus 87 ALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred HHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence 99999999999999999999999999999999999999999876644
No 83
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.55 E-value=2.4e-14 Score=79.34 Aligned_cols=54 Identities=48% Similarity=0.767 Sum_probs=27.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHH
Q 028517 114 GRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 167 (208)
Q Consensus 114 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll 167 (208)
|.||+|+|+..|+.+++++|+++|.+++.+|.+|.||||.|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 345555555555555555555555555555555555555555555555555553
No 84
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.53 E-value=1.1e-13 Score=113.82 Aligned_cols=104 Identities=31% Similarity=0.434 Sum_probs=92.4
Q ss_pred HHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCH
Q 028517 48 LLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWL 127 (208)
Q Consensus 48 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~ 127 (208)
.|+.|+..|+.+.++.|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||+|+|+..++.
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gad---in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGAD---PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 48889999999999999998876 567788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-------CCCCCCCCCCCCcHHHHH
Q 028517 128 KIVELLISR-------GAKINSKDKVGCTALHRG 154 (208)
Q Consensus 128 ~~~~~ll~~-------~~~~~~~~~~~~t~l~~A 154 (208)
+++++|+.+ +++.+..+..|.+|+..+
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence 999999998 777777777676665544
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=1.3e-13 Score=105.66 Aligned_cols=117 Identities=26% Similarity=0.314 Sum_probs=96.0
Q ss_pred HHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHH
Q 028517 49 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLK 128 (208)
Q Consensus 49 L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 128 (208)
|.-|+..|-+|+++.++..-.+ ....+..|.|+||.|+..||.++++||++.|++++..|.+||||||+|+..++..
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D---pSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD---PSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC---CCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence 4567788999999998854333 5666778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCC-CCCCCCcHHHHH--HhhCCHHHHHHHHH
Q 028517 129 IVELLISRGAKINS-KDKVGCTALHRG--ASTGNSALCELLIE 168 (208)
Q Consensus 129 ~~~~ll~~~~~~~~-~~~~~~t~l~~A--~~~~~~~~~~~Ll~ 168 (208)
+++.|++.|+.+.. +-+++.|+..-+ ...|+.++.+||..
T Consensus 631 ~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 631 MCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 99999999877654 345677877644 45688888898864
No 86
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.50 E-value=3.3e-14 Score=79.22 Aligned_cols=55 Identities=49% Similarity=0.690 Sum_probs=24.5
Q ss_pred HHhCC-CCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 028517 100 LLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRG 154 (208)
Q Consensus 100 Ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A 154 (208)
|+++| .+++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 34555 56666677777777777777777777777777777777777777777665
No 87
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.49 E-value=2.7e-13 Score=96.75 Aligned_cols=123 Identities=33% Similarity=0.370 Sum_probs=97.0
Q ss_pred CCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCC-CCCCchHHHHHH
Q 028517 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLK-NDGGRTALHYAA 122 (208)
Q Consensus 44 ~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~l~~a~ 122 (208)
...+||.-++..+..+.+..|++--.. .+..|.+|+++|..|+..|+.++++.|++.|++++.. +..+.|||+.|+
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~---vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQ---VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhh---hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence 346788888888888887777753222 6777888888888888888888888888888888763 456788888888
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHc
Q 028517 123 SKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE 169 (208)
Q Consensus 123 ~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 169 (208)
..|+.++...|++.|+.+...++-|.|+-..|++-|+-++|..+-.+
T Consensus 88 LSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred HcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 88888888888888888888888888888888888888888766544
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=4.5e-13 Score=102.74 Aligned_cols=101 Identities=37% Similarity=0.490 Sum_probs=89.9
Q ss_pred HHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 028517 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (208)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 166 (208)
-|...|-+++++.++..--++...+..|.|+||.|+..|+.+++++|+++|+++|..|++||||||.|+..++.-+++.|
T Consensus 556 DaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqL 635 (752)
T KOG0515|consen 556 DAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQL 635 (752)
T ss_pred hhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHH
Confidence 37888999999999998888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCC-CCCCCHHHHH
Q 028517 167 IEEGAEVDATD-KAGQTPLMNA 187 (208)
Q Consensus 167 l~~~~~~~~~~-~~g~t~l~~A 187 (208)
.+.|+-+.... +++.|+..-+
T Consensus 636 Ve~GaavfAsTlSDmeTa~eKC 657 (752)
T KOG0515|consen 636 VESGAAVFASTLSDMETAAEKC 657 (752)
T ss_pred HhccceEEeeecccccchhhhc
Confidence 99987664443 5677777643
No 89
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.07 E-value=8.2e-11 Score=95.02 Aligned_cols=81 Identities=35% Similarity=0.478 Sum_probs=43.6
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 028517 109 LKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKV-GCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNA 187 (208)
Q Consensus 109 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A 187 (208)
.+|..|.+++|+++..+...+++||+++|++++.+|.+ |+||||.|..+|+.+++-.|+.+|+.+.+.|.+|.+||...
T Consensus 47 ikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~ 126 (1267)
T KOG0783|consen 47 IKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFL 126 (1267)
T ss_pred HHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHH
Confidence 34555555555555555555555555555555555443 45555555555555555555555555555555555555554
Q ss_pred HH
Q 028517 188 VI 189 (208)
Q Consensus 188 ~~ 189 (208)
++
T Consensus 127 ~r 128 (1267)
T KOG0783|consen 127 SR 128 (1267)
T ss_pred hh
Confidence 44
No 90
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.1e-09 Score=85.39 Aligned_cols=121 Identities=26% Similarity=0.395 Sum_probs=88.3
Q ss_pred HHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcC
Q 028517 13 DLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIG 92 (208)
Q Consensus 13 ~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~ 92 (208)
.|..|+..+++--++..-..+ .++..++.+..+.||+|+..|+-++++|++++++. +++...++.|.|+||.|+..+
T Consensus 869 eil~av~~~D~~klqE~h~~g--g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~-elld~~de~get~lhkaa~~~ 945 (1004)
T KOG0782|consen 869 EILRAVLSSDLMKLQETHLNG--GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS-ELLDMADETGETALHKAACQR 945 (1004)
T ss_pred HHHHHHHhccHHHHHHHHhcC--CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH-HHHHHHhhhhhHHHHHHHHhc
Confidence 467777777765555554333 35556677778888888888888888888877653 446666777888888888888
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHc
Q 028517 93 NVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR 136 (208)
Q Consensus 93 ~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~ 136 (208)
+..+.++|++.|+.+...|..|.||-.-|-+.+..++..||-.+
T Consensus 946 ~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 946 NRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred chHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 88888888888877777777788887777777777777777644
No 91
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.05 E-value=3.3e-10 Score=91.63 Aligned_cols=108 Identities=22% Similarity=0.372 Sum_probs=89.4
Q ss_pred HHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCC
Q 028517 14 LFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGN 93 (208)
Q Consensus 14 l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 93 (208)
...+...+....++-+++..-.+..+..|..|+|+||+++..+..++++||+++|.+. .-+..+.|+||||.|+.+|+
T Consensus 21 ~~~~~tKs~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv--~vqD~ESG~taLHRaiyyG~ 98 (1267)
T KOG0783|consen 21 QDDSKTKSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDV--FVQDEESGYTALHRAIYYGN 98 (1267)
T ss_pred hhhhhhcCChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCcee--eeccccccchHhhHhhhhch
Confidence 3344445555567777776645667888999999999999999999999999988763 23334689999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCchHHHHHHH
Q 028517 94 VTIVEMLLSKGADVNLKNDGGRTALHYAAS 123 (208)
Q Consensus 94 ~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~ 123 (208)
++++-.|+++|..+..+|++|..|+...++
T Consensus 99 idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 99 IDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred HHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 999999999999999999999999987665
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=99.00 E-value=7.9e-10 Score=52.84 Aligned_cols=29 Identities=45% Similarity=0.684 Sum_probs=22.5
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHHcCCCCC
Q 028517 146 VGCTALHRGASTGNSALCELLIEEGAEVD 174 (208)
Q Consensus 146 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 174 (208)
+|+||||+|++.|+.+++++|+++|+|++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36778888888888888888888877765
No 93
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.97 E-value=1.7e-09 Score=82.77 Aligned_cols=85 Identities=32% Similarity=0.311 Sum_probs=71.0
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCccc
Q 028517 117 ALHYAASKGWLKIVELLISRGAKINSKDKV-GCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEF 195 (208)
Q Consensus 117 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~ 195 (208)
-||-+++.++.+..--|+.-|++.|..+.+ |.||||.|++.|+..-+++|.-+|+|+...|.+|.||+.+|-..|+-++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 477778888888888888888888887764 7889999999999888888888899998889899999999988888887
Q ss_pred cccccc
Q 028517 196 SGCSSS 201 (208)
Q Consensus 196 ~~~l~~ 201 (208)
.+-|++
T Consensus 216 aeRl~e 221 (669)
T KOG0818|consen 216 AERLVE 221 (669)
T ss_pred HHHHHH
Confidence 766654
No 94
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.97 E-value=8.6e-10 Score=84.00 Aligned_cols=121 Identities=21% Similarity=0.219 Sum_probs=93.4
Q ss_pred HHHHHHHcCChHHHHHHHHHhhhhhcc----CCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHH
Q 028517 13 DLFKAAETGDSSTFKSLSKQQLLKSLS----LRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (208)
Q Consensus 13 ~l~~a~~~g~~~~~~~l~~~~~~~~~~----~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a 88 (208)
.|..-.-..+++.+...-+.. .++. .++..+..++.+|++.|.+..++.+.-.+.+ +...|.+..|+||.|
T Consensus 472 ~Lvs~fNFHNYD~L~h~~~~K--~DPRR~~~~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D---~~~~DyD~RTaLHvA 546 (622)
T KOG0506|consen 472 QLVSKFNFHNYDSLRHPDNRK--IDPRREGGPRENDTVINVMYAAKNGDLSALRRFALQGMD---LETKDYDDRTALHVA 546 (622)
T ss_pred HHHHHhcccCchhhccccccc--CCcccccCcccccchhhhhhhhhcCCHHHHHHHHHhccc---ccccccccchhheee
Confidence 444455556666666654422 2332 2345566788999999999999888766665 788888899999999
Q ss_pred HhcCCHHHHHHHHh-CCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCC
Q 028517 89 ASIGNVTIVEMLLS-KGADVNLKNDGGRTALHYAASKGWLKIVELLISRGA 138 (208)
Q Consensus 89 ~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~ 138 (208)
+..|+++++++|++ -+.+++.+|++|+||+.-|...++.+++++|.+...
T Consensus 547 AaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 547 AAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred cccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHhc
Confidence 99999999999999 467888899999999999999999999998887643
No 95
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.94 E-value=2.9e-09 Score=83.06 Aligned_cols=119 Identities=27% Similarity=0.445 Sum_probs=99.3
Q ss_pred HHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHhhCCHHHHHH
Q 028517 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK--INSKDKVGCTALHRGASTGNSALCEL 165 (208)
Q Consensus 88 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~t~l~~A~~~~~~~~~~~ 165 (208)
|+..+.+--++-....|..+-.++.+..+.||+|+..|+-++++|++++|.. ++..|..|.|+||.|+-.++-.+.++
T Consensus 873 av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~ 952 (1004)
T KOG0782|consen 873 AVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQL 952 (1004)
T ss_pred HHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHH
Confidence 4444444334444456777777788889999999999999999999999854 44567789999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCHHHHHHHhCCcccccccccccccc
Q 028517 166 LIEEGAEVDATDKAGQTPLMNAVICYNKEFSGCSSSNKTWS 206 (208)
Q Consensus 166 Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~~~ 206 (208)
|.+.|+.+...|..|.||-.-|-+.|.++...||-+...|+
T Consensus 953 lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq~yk 993 (1004)
T KOG0782|consen 953 LVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQNYK 993 (1004)
T ss_pred HHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhhchh
Confidence 99999999999999999999999999999999998766554
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.93 E-value=8.7e-09 Score=79.04 Aligned_cols=85 Identities=35% Similarity=0.463 Sum_probs=77.2
Q ss_pred HHHHHHhcCCHHHHHHHHhCCCCCCCCCC-CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHH
Q 028517 84 PIHSAASIGNVTIVEMLLSKGADVNLKND-GGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSAL 162 (208)
Q Consensus 84 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~ 162 (208)
-||.+++.|+.+..-.|+..|++++..+. .|.||||.|++.|+..-+++|+-+|+|+...|.+|.||+.+|-..|+-++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 58899999999999999999999998765 79999999999999999999999999999999999999999999999887
Q ss_pred HHHHHH
Q 028517 163 CELLIE 168 (208)
Q Consensus 163 ~~~Ll~ 168 (208)
.+.|++
T Consensus 216 aeRl~e 221 (669)
T KOG0818|consen 216 AERLVE 221 (669)
T ss_pred HHHHHH
Confidence 766654
No 97
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.92 E-value=1.9e-09 Score=82.24 Aligned_cols=93 Identities=26% Similarity=0.390 Sum_probs=85.1
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHh
Q 028517 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR-GAKINSKDKVGCTALHRGAS 156 (208)
Q Consensus 78 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~A~~ 156 (208)
+..+...+..|++.|.+..++.+.-.|.++..+|.+..|.||+|+.-|+.+++++|++. +.+++.+|.||+|||.-|..
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 34566788999999999999999999999999999999999999999999999999976 88999999999999999999
Q ss_pred hCCHHHHHHHHHcC
Q 028517 157 TGNSALCELLIEEG 170 (208)
Q Consensus 157 ~~~~~~~~~Ll~~~ 170 (208)
.++.+++++|-+..
T Consensus 583 F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 583 FKHKEVVKLLEEAQ 596 (622)
T ss_pred cCcHHHHHHHHHHh
Confidence 99999999998753
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.89 E-value=4.5e-09 Score=51.64 Aligned_cols=32 Identities=38% Similarity=0.667 Sum_probs=25.3
Q ss_pred CCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCC
Q 028517 146 VGCTALHRGASTGNSALCELLIEEGAEVDATD 177 (208)
Q Consensus 146 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 177 (208)
+|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 36788888888888888888888888887665
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=98.81 E-value=9.6e-09 Score=49.05 Aligned_cols=24 Identities=54% Similarity=0.765 Sum_probs=9.9
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCC
Q 028517 82 WAPIHSAASIGNVTIVEMLLSKGA 105 (208)
Q Consensus 82 ~~~l~~a~~~~~~~~~~~Ll~~~~ 105 (208)
+||||.|++.|+.+++++|+++|+
T Consensus 3 ~T~Lh~A~~~g~~e~v~~Ll~~ga 26 (30)
T PF13606_consen 3 NTPLHLAASNGNIEIVKYLLEHGA 26 (30)
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCC
Confidence 344444444444444444444433
No 100
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.80 E-value=4.8e-08 Score=79.63 Aligned_cols=88 Identities=24% Similarity=0.312 Sum_probs=59.8
Q ss_pred ccCcHHHHHHHHcCChHHHHHHHHHhhh--hhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHH
Q 028517 8 TIKDKDLFKAAETGDSSTFKSLSKQQLL--KSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (208)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~~~~l~~~~~~--~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l 85 (208)
..+...+..|+..|++-.|+..++.... .+.+-.|.-|+++|+.|+...+.++.++|++..- .. ..+|
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~-----~~-----gdAL 92 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSS-----EE-----GDAL 92 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcc-----cc-----chHH
Confidence 3445667777788888888877775533 4555667777777777777777777777775321 11 3467
Q ss_pred HHHHhcCCHHHHHHHHhCCC
Q 028517 86 HSAASIGNVTIVEMLLSKGA 105 (208)
Q Consensus 86 ~~a~~~~~~~~~~~Ll~~~~ 105 (208)
..|++.|..++++.++.+..
T Consensus 93 L~aI~~~~v~~VE~ll~~~~ 112 (822)
T KOG3609|consen 93 LLAIAVGSVPLVELLLVHFV 112 (822)
T ss_pred HHHHHHHHHHHHHHHHhccc
Confidence 77777777777777777643
No 101
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.77 E-value=3.8e-08 Score=76.96 Aligned_cols=90 Identities=29% Similarity=0.442 Sum_probs=52.3
Q ss_pred HHHHHhcCCHHHHHHHHhcccccccccc-cCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCH
Q 028517 49 LHVAASCGHPEVVEILLSVDESANVVNA-VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWL 127 (208)
Q Consensus 49 L~~A~~~g~~~~~~~ll~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~ 127 (208)
|..|....++..+-.|+.+|...+..+. .+..|.|+||.|++.|++.+.++|+-+|.++..+|..|.|+|+||.+.|..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence 4444455555555555655544332222 233456666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHcCC
Q 028517 128 KIVELLISRGA 138 (208)
Q Consensus 128 ~~~~~ll~~~~ 138 (208)
+|+..|+++|+
T Consensus 708 ec~d~llq~gc 718 (749)
T KOG0705|consen 708 ECIDVLLQYGC 718 (749)
T ss_pred HHHHHHHHcCC
Confidence 66666666654
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.76 E-value=2e-08 Score=49.24 Aligned_cols=30 Identities=47% Similarity=0.766 Sum_probs=15.6
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCCCCCCCC
Q 028517 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLK 110 (208)
Q Consensus 81 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 110 (208)
|.||||+|+..|+.+++++|+++|++++.+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 445555555555555555555555555443
No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.72 E-value=1.6e-08 Score=78.16 Aligned_cols=86 Identities=28% Similarity=0.442 Sum_probs=54.2
Q ss_pred HHHHHHhcCCHHHHHHHHh--CCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHH
Q 028517 84 PIHSAASIGNVTIVEMLLS--KGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA 161 (208)
Q Consensus 84 ~l~~a~~~~~~~~~~~Ll~--~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~ 161 (208)
|+|+++.....+-+...+. ....++.+|..|.||+|.|+..|+...+..|+..|+++..++.+|++|||.|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 4666666655544444322 23455566666677777777777777777777777776667777777777777777766
Q ss_pred HHHHHHHc
Q 028517 162 LCELLIEE 169 (208)
Q Consensus 162 ~~~~Ll~~ 169 (208)
++.-++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 66555543
No 104
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.70 E-value=5.9e-08 Score=75.90 Aligned_cols=93 Identities=25% Similarity=0.307 Sum_probs=79.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhhhc--cCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHH
Q 028517 12 KDLFKAAETGDSSTFKSLSKQQLLKSL--SLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAA 89 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~~~~~~~--~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~ 89 (208)
-.|..|+...++..+..|+..+..... ...+.+|+|+||+||..|++.+.++|+-++.+ ....|..|.|+|++|=
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d---v~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD---VMARDAHGRTALFYAR 702 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc---ceecccCCchhhhhHh
Confidence 357889999999999999987743322 34466789999999999999999999988876 5678899999999999
Q ss_pred hcCCHHHHHHHHhCCCCC
Q 028517 90 SIGNVTIVEMLLSKGADV 107 (208)
Q Consensus 90 ~~~~~~~~~~Ll~~~~~~ 107 (208)
+.|..+++..|+++|+..
T Consensus 703 ~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPD 720 (749)
T ss_pred hcccHHHHHHHHHcCCCc
Confidence 999999999999998743
No 105
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.62 E-value=1.7e-07 Score=72.73 Aligned_cols=89 Identities=35% Similarity=0.499 Sum_probs=72.4
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhc
Q 028517 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASI 91 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~ 91 (208)
.++|.++...+.+.+...+.......+..+|..|.||||+|+..|+.+.++.|+..+++ ...++..|++|||.|+..
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad---v~~kN~~gWs~L~EAv~~ 98 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD---VSIKNNEGWSPLHEAVST 98 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC---ccccccccccHHHHHHHc
Confidence 45888888888888888765554556777888889999999999999999999887776 566778889999999999
Q ss_pred CCHHHHHHHHhC
Q 028517 92 GNVTIVEMLLSK 103 (208)
Q Consensus 92 ~~~~~~~~Ll~~ 103 (208)
|+.+++..++.+
T Consensus 99 g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 99 GNEQIITEVLRH 110 (560)
T ss_pred CCHHHHHHHHHH
Confidence 998888888776
No 106
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.43 E-value=2.1e-07 Score=77.40 Aligned_cols=89 Identities=33% Similarity=0.432 Sum_probs=79.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCC
Q 028517 113 GGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYN 192 (208)
Q Consensus 113 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~ 192 (208)
.|.+++|.|+..+..-+.+.|+++|++++..|..|.||+|.+...|+...+..++++|++++..+.+|++++++|....+
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhcc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred ccccccccc
Q 028517 193 KEFSGCSSS 201 (208)
Q Consensus 193 ~~~~~~l~~ 201 (208)
-+++.++..
T Consensus 735 ~d~~~l~~l 743 (785)
T KOG0521|consen 735 ADIVLLLRL 743 (785)
T ss_pred ccHHHHHhh
Confidence 776665543
No 107
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.39 E-value=2.1e-06 Score=64.28 Aligned_cols=73 Identities=27% Similarity=0.259 Sum_probs=58.6
Q ss_pred chHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHH
Q 028517 46 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYA 121 (208)
Q Consensus 46 ~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a 121 (208)
.--|..||+.|..+.+++|++.|.+ +|..|...+.||+.|+..||.+++++|++.|+-...-...|..++.-|
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn---VN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN---VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC---cchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhh
Confidence 3348899999999999999987665 788888899999999999999999999999986665444666664433
No 108
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.35 E-value=2.1e-06 Score=70.44 Aligned_cols=143 Identities=19% Similarity=0.155 Sum_probs=112.0
Q ss_pred CCCchHHHHHHhcCCHHHHHHHHhcccc-cccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHH
Q 028517 43 DDDRTLLHVAASCGHPEVVEILLSVDES-ANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYA 121 (208)
Q Consensus 43 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a 121 (208)
..+.--+..|+..|+...++..++.... .-..+..|.-|.++|+.|+.+.+.++..+|++++.+. ..++.+|
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~a 95 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLA 95 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHH
Confidence 3445567899999999999998864443 1226778889999999999999999999999997655 3478899
Q ss_pred HHcCCHHHHHHHHHcCCCCC----------CCCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Q 028517 122 ASKGWLKIVELLISRGAKIN----------SKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICY 191 (208)
Q Consensus 122 ~~~~~~~~~~~ll~~~~~~~----------~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~ 191 (208)
+..|..++++.++.+..... ..-..+.||+.+|+..++.|+++.|+.+|+.+-.+......+-.+.....
T Consensus 96 I~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~~C~C~~C~~~~~ 175 (822)
T KOG3609|consen 96 IAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDIRCECKTCKRETV 175 (822)
T ss_pred HHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcccccCchHhhhccc
Confidence 99999999999998743321 11234789999999999999999999999998877766665555544443
Q ss_pred C
Q 028517 192 N 192 (208)
Q Consensus 192 ~ 192 (208)
.
T Consensus 176 ~ 176 (822)
T KOG3609|consen 176 T 176 (822)
T ss_pred c
Confidence 3
No 109
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.31 E-value=5.3e-07 Score=61.18 Aligned_cols=69 Identities=29% Similarity=0.356 Sum_probs=61.2
Q ss_pred CCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHcCCC
Q 028517 104 GADVNLKNDGGRTALHYAASKGWLKIVELLISRG-AKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 172 (208)
Q Consensus 104 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~ 172 (208)
+.+++.+|..|+|+++.|+.-|+.+.+.||+.+| +++-..|..+.+++.+|-+.|..+++..|.+.--+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4568889999999999999999999999999999 78888899999999999999999999999887333
No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.27 E-value=4.4e-06 Score=62.65 Aligned_cols=70 Identities=24% Similarity=0.305 Sum_probs=62.1
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 028517 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTAL 151 (208)
Q Consensus 82 ~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 151 (208)
..-|..||+.|..+.+++|++.|.++|..|+....|+.+|+..|+.+++++|+++|+-......+|..++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~ 106 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH 106 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence 3457889999999999999999999999999999999999999999999999999987765555666554
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.17 E-value=1.9e-06 Score=71.99 Aligned_cols=127 Identities=24% Similarity=0.251 Sum_probs=96.0
Q ss_pred cccCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCchHHHHHHHcCCHHHHHHH-HHcCCCCCCCCCCCCcHHH
Q 028517 75 NAVDEEGWAPIHSAASIGNVTIVEMLLSK-GADVNLKNDGGRTALHYAASKGWLKIVELL-ISRGAKINSKDKVGCTALH 152 (208)
Q Consensus 75 ~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l-l~~~~~~~~~~~~~~t~l~ 152 (208)
....-.|++.+|.+...+..-+++.+++- +......+..|...+|.++ .+..+..-++ .-.|..++.+|..|+||||
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTPLH 646 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcccc
Confidence 33445788899999999998888888884 7767777778888888744 4444443333 3457778888999999999
Q ss_pred HHHhhCCHHHHHHHHHcCCCC------CCCCCCCCCHHHHHHHhCCcccccccccc
Q 028517 153 RGASTGNSALCELLIEEGAEV------DATDKAGQTPLMNAVICYNKEFSGCSSSN 202 (208)
Q Consensus 153 ~A~~~~~~~~~~~Ll~~~~~~------~~~~~~g~t~l~~A~~~~~~~~~~~l~~~ 202 (208)
+|...|...++..|++.|++. ..-...|.|+..+|..+|+..+..+|.+.
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 999999999999998765543 23345689999999999998888887663
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.13 E-value=1.6e-05 Score=54.21 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=62.2
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHhCC-CCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 028517 74 VNAVDEEGWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKIN 141 (208)
Q Consensus 74 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~ 141 (208)
++.+|..|+|+++.|+..|+.+.+.+|+.+| +.+...|.++.+...+|-+.|..+++..|.+...+-+
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets 73 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS 73 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence 6888999999999999999999999999999 8899999999999999999999999999988744433
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.10 E-value=4.8e-06 Score=69.60 Aligned_cols=87 Identities=38% Similarity=0.504 Sum_probs=78.4
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC
Q 028517 80 EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN 159 (208)
Q Consensus 80 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~ 159 (208)
.|.++||.|+..+..-+..+|++.|.+++.+|..|.+|+|.+...|+......++++|++.+..+..|.+|+..|....+
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999977755
Q ss_pred HHHHHHH
Q 028517 160 SALCELL 166 (208)
Q Consensus 160 ~~~~~~L 166 (208)
.+++-++
T Consensus 735 ~d~~~l~ 741 (785)
T KOG0521|consen 735 ADIVLLL 741 (785)
T ss_pred ccHHHHH
Confidence 5544333
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.09 E-value=1.2e-05 Score=67.46 Aligned_cols=130 Identities=25% Similarity=0.288 Sum_probs=98.8
Q ss_pred hhccCCCCCCchHHHHHHhcCCHHHHHHHHhc-ccccccccccCCCCCcHHHHHHhcCCHHHHHHHHh-CCCCCCCCCCC
Q 028517 36 KSLSLRNDDDRTLLHVAASCGHPEVVEILLSV-DESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLS-KGADVNLKNDG 113 (208)
Q Consensus 36 ~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~-~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~ 113 (208)
.......-.|.+.+|+++..+..-+++.+++- +.. ....+..+...+|. |..++.+.+-+++. .|..++.+|..
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~---~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~ 640 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSG---DLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRN 640 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccC---chhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCC
Confidence 34445566789999999999999999999874 322 23345666777777 55555565555554 78889999999
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCcHHHHHHhhCCHHHHHHHHHc
Q 028517 114 GRTALHYAASKGWLKIVELLISRGAK------INSKDKVGCTALHRGASTGNSALCELLIEE 169 (208)
Q Consensus 114 ~~~~l~~a~~~~~~~~~~~ll~~~~~------~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 169 (208)
|+||||+|..+|+..++..|.+-|++ +......|.|+...|-.+|+..+.-+|-++
T Consensus 641 G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 641 GWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred CCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99999999999999999999866543 333455688999999999998888888664
No 115
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=97.40 E-value=0.0031 Score=43.10 Aligned_cols=140 Identities=16% Similarity=0.052 Sum_probs=89.8
Q ss_pred CchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHc
Q 028517 45 DRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASK 124 (208)
Q Consensus 45 g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~ 124 (208)
-.-.|..|++++-+.++++.-+.... .-...++.+..||+..+.++++|+-+.-... +-.+.+.+|+..
T Consensus 46 ~~CLl~HAVk~nmL~ILqkyke~L~~------~~~~~q~LFElAC~~qkydiV~WI~qnL~i~-----~~~~iFdIA~~~ 114 (192)
T PF03158_consen 46 MWCLLYHAVKYNMLSILQKYKEDLEN------ERYLNQELFELACEEQKYDIVKWIGQNLHIY-----NPEDIFDIAFAK 114 (192)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHhhc------chhHHHHHHHHHHHHccccHHHHHhhccCCC-----Cchhhhhhhhhc
Confidence 34567888888888888887542211 1124566777899999999999985542222 234467788887
Q ss_pred CCHHHHH----HHHHcCCCCCCCCCC--CCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCcccccc
Q 028517 125 GWLKIVE----LLISRGAKINSKDKV--GCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEFSGC 198 (208)
Q Consensus 125 ~~~~~~~----~ll~~~~~~~~~~~~--~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 198 (208)
...++.. .+.++...-...|.. -..-|..|+..|....+.-.+++|.+.+. +++..|+..++..|+.+
T Consensus 115 kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~y 188 (192)
T PF03158_consen 115 KDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDY 188 (192)
T ss_pred cchhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHH
Confidence 7776632 222332111111110 01235688888999888888888877653 78999999998888887
Q ss_pred ccc
Q 028517 199 SSS 201 (208)
Q Consensus 199 l~~ 201 (208)
++.
T Consensus 189 fi~ 191 (192)
T PF03158_consen 189 FIR 191 (192)
T ss_pred hhc
Confidence 764
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.34 E-value=0.00061 Score=53.28 Aligned_cols=66 Identities=27% Similarity=0.289 Sum_probs=53.8
Q ss_pred HcCCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHhhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q 028517 123 SKGWLKIVELLISRGAKINS------KDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAV 188 (208)
Q Consensus 123 ~~~~~~~~~~ll~~~~~~~~------~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 188 (208)
...-...+++|.+++.+.|. .+....|+||+|+..|.-.++.+||+.|.|+..+|..|.||..++.
T Consensus 400 k~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 400 KKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred ccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 34446788899988766543 2334578999999999999999999999999999999999998876
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.32 E-value=0.00062 Score=31.08 Aligned_cols=27 Identities=41% Similarity=0.733 Sum_probs=17.1
Q ss_pred CCcHHHHHHhhCCHHHHHHHHHcCCCC
Q 028517 147 GCTALHRGASTGNSALCELLIEEGAEV 173 (208)
Q Consensus 147 ~~t~l~~A~~~~~~~~~~~Ll~~~~~~ 173 (208)
+.||+++|+..++.++++.|++++.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666665543
No 118
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=97.31 E-value=0.0027 Score=43.44 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=93.3
Q ss_pred HHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhcC
Q 028517 13 DLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIG 92 (208)
Q Consensus 13 ~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~~ 92 (208)
-|.+|++.+-+.++++. + ......-...++.+-.||...+.|+++|+-+.- .-..-.+.+-.|....
T Consensus 49 Ll~HAVk~nmL~ILqky--k---e~L~~~~~~~q~LFElAC~~qkydiV~WI~qnL--------~i~~~~~iFdIA~~~k 115 (192)
T PF03158_consen 49 LLYHAVKYNMLSILQKY--K---EDLENERYLNQELFELACEEQKYDIVKWIGQNL--------HIYNPEDIFDIAFAKK 115 (192)
T ss_pred HHHHHHHcCcHHHHHHH--H---HHhhcchhHHHHHHHHHHHHccccHHHHHhhcc--------CCCCchhhhhhhhhcc
Confidence 46678888887777776 2 233322356788999999999999999995321 1123445678899988
Q ss_pred CHHHHH----HHHhCCCCCCCCCCC--CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 028517 93 NVTIVE----MLLSKGADVNLKNDG--GRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (208)
Q Consensus 93 ~~~~~~----~Ll~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~L 166 (208)
+.++.. ++.++....+..|.. -..-+..|+..|-...+...+++|.+++. ++|..|+..++..++.++
T Consensus 116 DlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yf 189 (192)
T PF03158_consen 116 DLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYF 189 (192)
T ss_pred chhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHh
Confidence 877642 233332211111110 11336678899999999999999887643 699999999999999888
Q ss_pred HH
Q 028517 167 IE 168 (208)
Q Consensus 167 l~ 168 (208)
+.
T Consensus 190 i~ 191 (192)
T PF03158_consen 190 IR 191 (192)
T ss_pred hc
Confidence 64
No 119
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.13 E-value=0.0012 Score=29.98 Aligned_cols=19 Identities=58% Similarity=0.756 Sum_probs=7.5
Q ss_pred hHHHHHHhcCCHHHHHHHH
Q 028517 47 TLLHVAASCGHPEVVEILL 65 (208)
Q Consensus 47 t~L~~A~~~g~~~~~~~ll 65 (208)
||+|+|+..++.++++.++
T Consensus 4 ~~l~~~~~~~~~~~~~~ll 22 (30)
T smart00248 4 TPLHLAAENGNLEVVKLLL 22 (30)
T ss_pred CHHHHHHHcCCHHHHHHHH
Confidence 3333333333333333333
No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.95 E-value=0.0025 Score=50.05 Aligned_cols=62 Identities=29% Similarity=0.309 Sum_probs=50.4
Q ss_pred HHHHHHHHhCCCCCCCC------CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 028517 94 VTIVEMLLSKGADVNLK------NDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGA 155 (208)
Q Consensus 94 ~~~~~~Ll~~~~~~~~~------~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~ 155 (208)
+..+.+|.+++...+.. +....|+||+|+.+|...|+.+|++.|+|+..+|..|.||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 56777888876554332 334678999999999999999999999999999999999998776
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.71 E-value=0.025 Score=40.19 Aligned_cols=45 Identities=33% Similarity=0.507 Sum_probs=31.4
Q ss_pred HHHHHHHHHcC-CCCCC---CCCCCCcHHHHHHhhCCHHHHHHHHHcCC
Q 028517 127 LKIVELLISRG-AKINS---KDKVGCTALHRGASTGNSALCELLIEEGA 171 (208)
Q Consensus 127 ~~~~~~ll~~~-~~~~~---~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~ 171 (208)
..++++++++| +++|. +-+.|.|-|.-|+++++.+++.+|+++|+
T Consensus 230 ~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 230 YKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred HHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 45667777776 23332 33457888888888888888888888876
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.62 E-value=0.12 Score=36.96 Aligned_cols=118 Identities=21% Similarity=0.238 Sum_probs=84.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccc-cccccCCCCCcHHHHHHh
Q 028517 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESAN-VVNAVDEEGWAPIHSAAS 90 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~-~~~~~~~~~~~~l~~a~~ 90 (208)
-.|..|+..-+++.+.-+.... ..-.+++.+|+..+..+++-+|+....-.. .+- ....+..-+.++.+
T Consensus 155 isledAV~AsN~~~i~~~VtdK---------kdA~~Am~~si~~~K~dva~~lls~f~ft~~dv~-~~~~~~ydieY~LS 224 (284)
T PF06128_consen 155 ISLEDAVKASNYEEISNLVTDK---------KDAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVA-SMEKELYDIEYLLS 224 (284)
T ss_pred ccHHHHHhhcCHHHHHHHhcch---------HHHHHHHHHHhcccHHHHHHHHHhhcceecchhh-hcCcchhhHHHHHh
Confidence 4567888888888877776433 123578999999999999999997543110 011 11223335666666
Q ss_pred c--CCHHHHHHHHhCC-CCCCC---CCCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 028517 91 I--GNVTIVEMLLSKG-ADVNL---KNDGGRTALHYAASKGWLKIVELLISRGAK 139 (208)
Q Consensus 91 ~--~~~~~~~~Ll~~~-~~~~~---~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 139 (208)
. .+..++++++++| ++++. +-.+|.|-|..|...++.+++..|+++|+-
T Consensus 225 ~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 225 EHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred hcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 5 4578999999988 45553 355899999999999999999999999974
No 123
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.69 E-value=0.12 Score=30.39 Aligned_cols=47 Identities=21% Similarity=0.188 Sum_probs=29.6
Q ss_pred cHHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHh
Q 028517 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLS 66 (208)
Q Consensus 11 ~~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~ 66 (208)
...+..|+..|+.|+++.+++... .....+..|+.+.+.++++||++
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~~---------~~~~~l~~AI~~H~n~i~~~l~~ 53 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKNK---------PDNDCLEYAIKSHNNEIADWLIE 53 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhc---------cHHHHHHHHHHHhhHHHHHHHHH
Confidence 456677777777777777764331 01345677777777777777765
No 124
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.41 E-value=0.093 Score=30.81 Aligned_cols=45 Identities=27% Similarity=0.344 Sum_probs=20.0
Q ss_pred HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHc
Q 028517 85 IHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR 136 (208)
Q Consensus 85 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~ 136 (208)
+..|+..|+.|+++.+++.+. ++ ...+..|+...+-++++||+++
T Consensus 10 l~~Ai~GGN~eII~~c~~~~~-~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 10 LEYAIIGGNFEIINICLKKNK-PD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHhCCCHHHHHHHHHHhc-cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 444455555555554444321 10 2234445555555555555443
No 125
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=76.70 E-value=24 Score=26.93 Aligned_cols=54 Identities=11% Similarity=-0.010 Sum_probs=24.4
Q ss_pred cHHHHHHHHcCChHHHHHHHHHhhhh-hccCCCCCCchHHHHHHhcCCHHHHHHH
Q 028517 11 DKDLFKAAETGDSSTFKSLSKQQLLK-SLSLRNDDDRTLLHVAASCGHPEVVEIL 64 (208)
Q Consensus 11 ~~~l~~a~~~g~~~~~~~l~~~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~~~~l 64 (208)
-..+-.+...++.+....+++.-.+. ..-..+..|...+......+..+....+
T Consensus 22 sr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i 76 (322)
T cd07920 22 SRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQL 76 (322)
T ss_pred hHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHH
Confidence 33444555555555555555442111 1112344555555555555554433333
No 126
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=68.58 E-value=4.9 Score=28.93 Aligned_cols=39 Identities=21% Similarity=0.239 Sum_probs=25.2
Q ss_pred HhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCC
Q 028517 101 LSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK 139 (208)
Q Consensus 101 l~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 139 (208)
++.|+-.+..|..+.|+=.+|...+.....+.|++.|+.
T Consensus 2 le~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 2 LEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 455666666666666666666666666666666666543
No 127
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=66.15 E-value=11 Score=30.39 Aligned_cols=140 Identities=16% Similarity=0.099 Sum_probs=70.4
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhhhccC-----------------------CCCCCchHHHHHHhcCCHHHHHHHHhcc
Q 028517 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSL-----------------------RNDDDRTLLHVAASCGHPEVVEILLSVD 68 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~~~~~~~~~-----------------------~~~~g~t~L~~A~~~g~~~~~~~ll~~~ 68 (208)
-.+..|+..++++.+..++.... ..+.. .-.+..+-+.+|...|+++.+.-+....
T Consensus 266 ~~fk~av~~~d~~~v~~~i~~~~-ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~D~~~rFeLAl~lg~L~~A~~~a~~~ 344 (443)
T PF04053_consen 266 LEFKTAVLRGDFEEVLRMIAASN-LLPNIPKDQGQSIARFLEKKGYPELALQFVTDPDHRFELALQLGNLDIALEIAKEL 344 (443)
T ss_dssp HHHHHHHHTT-HHH-----HHHH-TGGG--HHHHHHHHHHHHHTT-HHHHHHHSS-HHHHHHHHHHCT-HHHHHHHCCCC
T ss_pred HHHHHHHHcCChhhhhhhhhhhh-hcccCChhHHHHHHHHHHHCCCHHHHHhhcCChHHHhHHHHhcCCHHHHHHHHHhc
Confidence 45667888888888655554220 01000 1122345567777777777766664322
Q ss_pred cccccccccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 028517 69 ESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGC 148 (208)
Q Consensus 69 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 148 (208)
.++. .....-..|...|+.++++...++..+.+ ..+.+....|+.+-++.|.+.-. ....-+
T Consensus 345 ~~~~-------~W~~Lg~~AL~~g~~~lAe~c~~k~~d~~-------~L~lLy~~~g~~~~L~kl~~~a~----~~~~~n 406 (443)
T PF04053_consen 345 DDPE-------KWKQLGDEALRQGNIELAEECYQKAKDFS-------GLLLLYSSTGDREKLSKLAKIAE----ERGDIN 406 (443)
T ss_dssp STHH-------HHHHHHHHHHHTTBHHHHHHHHHHCT-HH-------HHHHHHHHCT-HHHHHHHHHHHH----HTT-HH
T ss_pred CcHH-------HHHHHHHHHHHcCCHHHHHHHHHhhcCcc-------ccHHHHHHhCCHHHHHHHHHHHH----HccCHH
Confidence 1110 11122245777888888888877755443 24556666777777777764310 011123
Q ss_pred cHHHHHHhhCCH-HHHHHHHHcC
Q 028517 149 TALHRGASTGNS-ALCELLIEEG 170 (208)
Q Consensus 149 t~l~~A~~~~~~-~~~~~Ll~~~ 170 (208)
..++.+...|+. ++++.|++.|
T Consensus 407 ~af~~~~~lgd~~~cv~lL~~~~ 429 (443)
T PF04053_consen 407 IAFQAALLLGDVEECVDLLIETG 429 (443)
T ss_dssp HHHHHHHHHT-HHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHcC
Confidence 366677777775 5777777653
No 128
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=59.46 E-value=32 Score=27.93 Aligned_cols=104 Identities=14% Similarity=0.048 Sum_probs=59.9
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHH
Q 028517 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA 161 (208)
Q Consensus 82 ~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~ 161 (208)
.+=+..|++.|+++.+.-+.+...+.. .....-..|...|+.++++....+..|.+ ..+.+....|+.+
T Consensus 322 ~~rFeLAl~lg~L~~A~~~a~~~~~~~----~W~~Lg~~AL~~g~~~lAe~c~~k~~d~~-------~L~lLy~~~g~~~ 390 (443)
T PF04053_consen 322 DHRFELALQLGNLDIALEIAKELDDPE----KWKQLGDEALRQGNIELAEECYQKAKDFS-------GLLLLYSSTGDRE 390 (443)
T ss_dssp HHHHHHHHHCT-HHHHHHHCCCCSTHH----HHHHHHHHHHHTTBHHHHHHHHHHCT-HH-------HHHHHHHHCT-HH
T ss_pred HHHhHHHHhcCCHHHHHHHHHhcCcHH----HHHHHHHHHHHcCCHHHHHHHHHhhcCcc-------ccHHHHHHhCCHH
Confidence 445778999999988876655422111 12234456788999999999888754432 2556777788888
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHhCCc-ccccccc
Q 028517 162 LCELLIEEGAEVDATDKAGQTPLMNAVICYNK-EFSGCSS 200 (208)
Q Consensus 162 ~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~-~~~~~l~ 200 (208)
-++.|.+... ...+-..+++.+...|+. +.++.|.
T Consensus 391 ~L~kl~~~a~----~~~~~n~af~~~~~lgd~~~cv~lL~ 426 (443)
T PF04053_consen 391 KLSKLAKIAE----ERGDINIAFQAALLLGDVEECVDLLI 426 (443)
T ss_dssp HHHHHHHHHH----HTT-HHHHHHHHHHHT-HHHHHHHHH
T ss_pred HHHHHHHHHH----HccCHHHHHHHHHHcCCHHHHHHHHH
Confidence 8877765310 011123466666666653 3334443
No 129
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=51.73 E-value=1.1e+02 Score=23.38 Aligned_cols=94 Identities=12% Similarity=0.015 Sum_probs=41.5
Q ss_pred cCcHHHHHHHHcCChHHHHHHHHHhhhhhc-cCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHH
Q 028517 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSL-SLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (208)
Q Consensus 9 ~~~~~l~~a~~~g~~~~~~~l~~~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~ 87 (208)
.+..-+-.++..+..+....+++...+... -..+..|.-.+-.+...+..+....+++.-......-..+..|...+..
T Consensus 56 ~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~ 135 (322)
T cd07920 56 FGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQK 135 (322)
T ss_pred cccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHH
Confidence 344445555555555555555544321111 1234555555555555555433333332111111112234455556655
Q ss_pred HHhcCCHHHHHHHHh
Q 028517 88 AASIGNVTIVEMLLS 102 (208)
Q Consensus 88 a~~~~~~~~~~~Ll~ 102 (208)
+......+..+.+++
T Consensus 136 ~l~~~~~~~~~~i~~ 150 (322)
T cd07920 136 CIEKFPPEDLQFIID 150 (322)
T ss_pred HHHhCCHHHHHHHHH
Confidence 555555444444433
No 130
>PF08898 DUF1843: Domain of unknown function (DUF1843); InterPro: IPR014994 This domain is found in functionally uncharacterised proteins. It can be found independently or at the C terminus of the protein.
Probab=36.88 E-value=67 Score=17.35 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=18.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHh
Q 028517 12 KDLFKAAETGDSSTFKSLSKQQ 33 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~~ 33 (208)
-+|+.|+..||+..+|.+....
T Consensus 5 vaiq~AiasGDLa~MK~l~~~a 26 (53)
T PF08898_consen 5 VAIQQAIASGDLAQMKALAAQA 26 (53)
T ss_pred HHHHHHHHcCcHHHHHHHHHHH
Confidence 3688899999999999998765
No 131
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=35.84 E-value=32 Score=24.49 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=33.3
Q ss_pred CCCCCcHHHHHHhhCCHHHH-HHHHHcCCC----CCCCCCCCCCHHHHHHHh
Q 028517 144 DKVGCTALHRGASTGNSALC-ELLIEEGAE----VDATDKAGQTPLMNAVIC 190 (208)
Q Consensus 144 ~~~~~t~l~~A~~~~~~~~~-~~Ll~~~~~----~~~~~~~g~t~l~~A~~~ 190 (208)
+.....|||.|+.-+..+++ -++++..+. ++-.|.+|..+|.+|.-.
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 34445699999998888876 566665433 355677899999988654
No 132
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=31.95 E-value=3.4e+02 Score=23.52 Aligned_cols=182 Identities=12% Similarity=0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhhhccCCCCCCchHHHHHHhcCCHHHHHHHHhcccccccccccCCCCCcHHHHHHhc
Q 028517 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASI 91 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~l~~a~~~ 91 (208)
.-+...++.|.++..+.+...-.............+.+..-++.|+.+-+..+++.-..++.. ..++.+...++.
T Consensus 330 ~ll~a~~~~g~~~~a~~i~~~m~~~g~~~d~~~~~~Li~~y~k~G~~~~A~~vf~~m~~~d~~-----t~n~lI~~y~~~ 404 (697)
T PLN03081 330 IMIRIFSRLALLEHAKQAHAGLIRTGFPLDIVANTALVDLYSKWGRMEDARNVFDRMPRKNLI-----SWNALIAGYGNH 404 (697)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhCCCCCeeehHHHHHHHHHCCCHHHHHHHHHhCCCCCee-----eHHHHHHHHHHc
Q ss_pred CC----HHHHHHHHhCCCCCCCCCCCCchHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCcHHHHHHhhCCHHHHH
Q 028517 92 GN----VTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR---GAKINSKDKVGCTALHRGASTGNSALCE 164 (208)
Q Consensus 92 ~~----~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~---~~~~~~~~~~~~t~l~~A~~~~~~~~~~ 164 (208)
|. .++++.+.+.|..++. ..-.+.+..++..|..+-...+.+. ...+......-...+..-++.|..+-+.
T Consensus 405 G~~~~A~~lf~~M~~~g~~Pd~--~T~~~ll~a~~~~g~~~~a~~~f~~m~~~~g~~p~~~~y~~li~~l~r~G~~~eA~ 482 (697)
T PLN03081 405 GRGTKAVEMFERMIAEGVAPNH--VTFLAVLSACRYSGLSEQGWEIFQSMSENHRIKPRAMHYACMIELLGREGLLDEAY 482 (697)
T ss_pred CCHHHHHHHHHHHHHhCCCCCH--HHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCCCccchHhHHHHHHhcCCHHHHH
Q ss_pred HHHHc-CCCCCCCCCCCCCHHHHHHHhCCcccccccccc
Q 028517 165 LLIEE-GAEVDATDKAGQTPLMNAVICYNKEFSGCSSSN 202 (208)
Q Consensus 165 ~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~l~~~ 202 (208)
-+++. +..++.... .+.+......|+.+..+...+.
T Consensus 483 ~~~~~~~~~p~~~~~--~~Ll~a~~~~g~~~~a~~~~~~ 519 (697)
T PLN03081 483 AMIRRAPFKPTVNMW--AALLTACRIHKNLELGRLAAEK 519 (697)
T ss_pred HHHHHCCCCCCHHHH--HHHHHHHHHcCCcHHHHHHHHH
No 133
>PLN03218 maturation of RBCL 1; Provisional
Probab=29.09 E-value=1.4e+02 Score=27.48 Aligned_cols=17 Identities=18% Similarity=0.198 Sum_probs=8.1
Q ss_pred HHHHHcCChHHHHHHHH
Q 028517 15 FKAAETGDSSTFKSLSK 31 (208)
Q Consensus 15 ~~a~~~g~~~~~~~l~~ 31 (208)
...++.|+++....+++
T Consensus 587 ~ay~k~G~ldeA~elf~ 603 (1060)
T PLN03218 587 KACANAGQVDRAKEVYQ 603 (1060)
T ss_pred HHHHHCCCHHHHHHHHH
Confidence 33445555555444443
No 134
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=27.39 E-value=1.2e+02 Score=17.10 Aligned_cols=21 Identities=29% Similarity=0.534 Sum_probs=16.3
Q ss_pred HHHHHHHcCChHHHHHHHHHh
Q 028517 13 DLFKAAETGDSSTFKSLSKQQ 33 (208)
Q Consensus 13 ~l~~a~~~g~~~~~~~l~~~~ 33 (208)
++..+|..|+.+.+..++..+
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y 22 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHY 22 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 456778888888888888766
No 135
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=27.32 E-value=16 Score=30.43 Aligned_cols=46 Identities=33% Similarity=0.452 Sum_probs=32.2
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHHc
Q 028517 124 KGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE 169 (208)
Q Consensus 124 ~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~ 169 (208)
.+....+-.+...+...+..|..+.+|+|.++..|.+++.+.++.-
T Consensus 406 ~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~ 451 (605)
T KOG3836|consen 406 NNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNC 451 (605)
T ss_pred cCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhh
Confidence 3444445555566667777777888888888888888888777654
No 136
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=27.13 E-value=66 Score=23.46 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=25.9
Q ss_pred cccCCCCCcHHHHHHhcCCHHHHHHHHhCCCCC
Q 028517 75 NAVDEEGWAPIHSAASIGNVTIVEMLLSKGADV 107 (208)
Q Consensus 75 ~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~ 107 (208)
+..+....|+=..|...++....+.|++.|+..
T Consensus 9 n~id~~n~t~gd~a~ern~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 9 NFIDYENKTVGDLALERNQSRLYRRLVEAGVPS 41 (271)
T ss_pred cccChhhCCchHHHHHccHHHHHHHHHHcCCch
Confidence 445566677778888899999999999988743
No 137
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=22.84 E-value=21 Score=29.39 Aligned_cols=22 Identities=14% Similarity=0.126 Sum_probs=13.2
Q ss_pred CCCchHHHHHHhcCCHHHHHHH
Q 028517 43 DDDRTLLHVAASCGHPEVVEIL 64 (208)
Q Consensus 43 ~~g~t~L~~A~~~g~~~~~~~l 64 (208)
..+.++.++.+..|....++..
T Consensus 53 s~~~~~~~l~~~~g~~~~~~~a 74 (503)
T KOG0513|consen 53 SLAYLELRLQNIDGDPSAARLA 74 (503)
T ss_pred hhcccHHHHHhccCChHhhHhh
Confidence 3455666777777766654444
No 138
>COG1732 OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane]
Probab=21.58 E-value=1.4e+02 Score=22.94 Aligned_cols=36 Identities=25% Similarity=0.514 Sum_probs=22.5
Q ss_pred HHHHHHHHc-CCCCCCCCCCCCcHH-HHHHhhCCHHHH
Q 028517 128 KIVELLISR-GAKINSKDKVGCTAL-HRGASTGNSALC 163 (208)
Q Consensus 128 ~~~~~ll~~-~~~~~~~~~~~~t~l-~~A~~~~~~~~~ 163 (208)
+|+..++++ |.....+..-|.|++ +.|...|..++.
T Consensus 50 ~m~~~lle~~~~kv~~~~~lG~t~v~~~Al~~G~IDiY 87 (300)
T COG1732 50 NILKQLLEKNGIKVEDKTGLGGTAVVRNALKSGDIDIY 87 (300)
T ss_pred HHHHHHHHhcCCceeeccCCCchHHHHHHHHcCCCCeE
Confidence 456666654 445555555677744 777777777765
No 139
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.52 E-value=4.1e+02 Score=24.23 Aligned_cols=21 Identities=14% Similarity=-0.078 Sum_probs=13.5
Q ss_pred HHHHHHHHcCChHHHHHHHHH
Q 028517 12 KDLFKAAETGDSSTFKSLSKQ 32 (208)
Q Consensus 12 ~~l~~a~~~g~~~~~~~l~~~ 32 (208)
..+-.|....+++.|-.|+..
T Consensus 598 y~FKlALi~k~ydeVl~lI~n 618 (1202)
T KOG0292|consen 598 YRFKLALLNKKYDEVLHLIKN 618 (1202)
T ss_pred HHHHHHHHhhhhHHHHHHHHh
Confidence 445666677777777666653
No 140
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=21.00 E-value=1.7e+02 Score=20.37 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=33.8
Q ss_pred CHHHHHHHHHcCCCCC---------CCCCCCCCHHHHHHHhCCcccccccccccc
Q 028517 159 NSALCELLIEEGAEVD---------ATDKAGQTPLMNAVICYNKEFSGCSSSNKT 204 (208)
Q Consensus 159 ~~~~~~~Ll~~~~~~~---------~~~~~g~t~l~~A~~~~~~~~~~~l~~~~~ 204 (208)
-.++++++++...||- .-...|..+|.+.+.+-..|++..+---+.
T Consensus 40 G~elV~lIk~a~~DPV~VMfDD~G~~g~G~GE~Al~~v~~h~~IeVLG~iAVASn 94 (180)
T PF14097_consen 40 GEELVELIKQAPHDPVLVMFDDKGFIGEGPGEQALEYVANHPDIEVLGAIAVASN 94 (180)
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCCCCCCccHHHHHHHHcCCCceEEEEEEEEec
Confidence 3678888888766652 223468899999999999999887754333
No 141
>PF04840 Vps16_C: Vps16, C-terminal region; InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=20.89 E-value=1.5e+02 Score=22.87 Aligned_cols=51 Identities=24% Similarity=0.257 Sum_probs=32.8
Q ss_pred HHHHHcCChHHHHHHHHHhhhhh---cc-CCCCCCchHHHHHHhcCCHHHHHHHH
Q 028517 15 FKAAETGDSSTFKSLSKQQLLKS---LS-LRNDDDRTLLHVAASCGHPEVVEILL 65 (208)
Q Consensus 15 ~~a~~~g~~~~~~~l~~~~~~~~---~~-~~~~~g~t~L~~A~~~g~~~~~~~ll 65 (208)
..|...|..++...|++..+... +. ..=....-+|.-|..+|+.|++-.++
T Consensus 8 ~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~AL~kAi~SgD~DLi~~vL 62 (319)
T PF04840_consen 8 RKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDELALNKAIESGDTDLIYLVL 62 (319)
T ss_pred HHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHHHHHHHHHcCCccHHHHHH
Confidence 56788888888888887542110 00 11123456788888888888776665
No 142
>PLN03218 maturation of RBCL 1; Provisional
Probab=20.00 E-value=7.3e+02 Score=23.23 Aligned_cols=14 Identities=14% Similarity=0.247 Sum_probs=5.8
Q ss_pred HHHcCChHHHHHHH
Q 028517 17 AAETGDSSTFKSLS 30 (208)
Q Consensus 17 a~~~g~~~~~~~l~ 30 (208)
.++.|+++....++
T Consensus 482 y~k~G~vd~A~~vf 495 (1060)
T PLN03218 482 CAKSGKVDAMFEVF 495 (1060)
T ss_pred HHhCcCHHHHHHHH
Confidence 34444444444333
Done!