BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028518
(208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600 OS=Arabidopsis
thaliana GN=At1g78600 PE=1 SV=2
Length = 299
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 11/146 (7%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL-ANPSDVPRCDIC 59
M+ C+VCE+A A + C ADEAALC +CDEK+H NKLA +H RV L A+ S +P+CDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 60 ENAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGRYLLLRQRVEFPGDKAGRLEELALQSL 119
+ A FF+C D + LC +CD+ +H T ++ QR G K G LE +
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIH-----TVNPHVSAHQRFLLTGIKVG-LESIDTGPS 114
Query: 120 DQNKITRD----QTQPFRITARENQQ 141
++ T D +T+PF + E Q+
Sbjct: 115 TKSSPTNDDKTMETKPFVQSIPEPQK 140
>sp|Q9LQZ7|STHX_ARATH Probable salt tolerance-like protein At1g75540 OS=Arabidopsis
thaliana GN=At1g75540 PE=1 SV=1
Length = 331
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS----DVPRC 56
M+ CDVC+ A +FC ADEA+LC CD +VH NKLAS+H+R L PS P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 57 DICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLL 96
DIC++ A +C+ D + LC CD ++H + T H R+LL
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>sp|Q96288|STO_ARATH Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1
Length = 248
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS-DVPRCDIC 59
M+ CDVCE A A + C ADEAALC CD ++H NKLAS+H R+ L + S PRCDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 60 ENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYL 95
+ AF +C D + LC CD ++HV R+ H R+L
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFL 98
>sp|Q0IGM7|BBX20_ARATH B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1
SV=1
Length = 242
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS--DVPRCDI 58
M+ C VC+ A +FC ADEAALC CD VH NKLA +H+R L +P+ D P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 59 CENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLLLRQRV 101
C A +C+ D + LC +CD+ +H + T H R+LL ++
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKI 105
>sp|Q9SID1|STH_ARATH Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1
SV=2
Length = 238
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS-DVPRCDIC 59
M+ CDVCE A A L C ADEAALC CD +VH NKLAS+H R+ L + S P CDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 60 ENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLLLRQRVEFPGDKAGR-LEELAL 116
AF +C D + LC CD H R+ H R+L RV + +E+
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF 120
Query: 117 QSLDQNKITRDQTQ 130
+Q +++ TQ
Sbjct: 121 DPSNQQSLSKPPTQ 134
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana
GN=COL3 PE=1 SV=1
Length = 294
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAP 63
LCD C+S AA LFC AD A LC CD K+H NKLASRH RV L C++CE AP
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL--------CEVCEQAP 58
Query: 64 AFFYCEIDGSSLCLQCDMTVHVGG--KRTHGR 93
A C+ D ++LC+ CD +H R H R
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL 47
LC+VCE A A + C AD AALC +CD +H N L+ RH RV +
Sbjct: 50 LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana
GN=COL4 PE=2 SV=2
Length = 362
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 8/81 (9%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAP 63
LCD C+SA A L+C D A LC SCD KVH NKLASRH RV + C++CE AP
Sbjct: 5 LCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM--------CEVCEQAP 56
Query: 64 AFFYCEIDGSSLCLQCDMTVH 84
A C+ D ++LC+ CD +H
Sbjct: 57 AHVTCKADAAALCVTCDRDIH 77
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRV 45
+C+VCE A A + C AD AALC +CD +H N LA RH RV
Sbjct: 48 MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 56 CDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLL 96
CD C++A A YC D + LCL CD VH K H R +
Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM 48
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana
GN=COL1 PE=1 SV=1
Length = 355
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C SAA ++C AD A LC SCD +VH N+LASRH RV + C CE APA
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV--------CQSCERAPA 63
Query: 65 FFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLLL 97
F+C+ D +SLC CD +H R H R +L
Sbjct: 64 AFFCKADAASLCTTCDSEIHSANPLARRHQRVPIL 98
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL 47
+C CE A A FC AD A+LC +CD ++H N LA RH RV +
Sbjct: 54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C SAA ++C AD A LC +CD +VH N++ASRH RV + C CE+APA
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV--------CQSCESAPA 67
Query: 65 FFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLLL 97
F C+ D +SLC CD +H R H R +L
Sbjct: 68 AFLCKADAASLCTACDAEIHSANPLARRHQRVPIL 102
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL 47
+C CESA A C AD A+LC +CD ++H N LA RH RV +
Sbjct: 58 VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C S A ++C AD A LC SCD +VH N++ASRH RV + C+ CE APA
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV--------CESCERAPA 71
Query: 65 FFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLLL 97
F CE D +SLC CD VH R H R +L
Sbjct: 72 AFLCEADDASLCTACDSEVHSANPLARRHQRVPIL 106
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL 47
+C+ CE A A C AD+A+LC +CD +VH N LA RH RV +
Sbjct: 62 VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAP 63
LCD C+S+ A+++C AD A LC +CD++VH+ N+L ++H R L CD C +P
Sbjct: 12 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL--------CDSCNESP 63
Query: 64 AFFYCEIDGSSLCLQCDMTVHVGGKRTHGR 93
+ +CE + S LC CD H H R
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASSSLHSR 93
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 2 RTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICEN 61
R CD C A+LFC AD A LC CD++VH N L+ +HVR + CD C N
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI--------CDNCGN 57
Query: 62 APAFFYCEIDGSSLCLQCDMTVH 84
P C D LC +CD VH
Sbjct: 58 EPVSVRCFTDNLILCQECDWDVH 80
>sp|Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana
GN=At1g68190 PE=2 SV=1
Length = 356
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M +C+ C++ A+++C AD A LC +CD KVH N L+ RH+R L CD C+
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL--------CDSCK 61
Query: 61 NAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGR 93
N P C LC C+ H GG H R
Sbjct: 62 NQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHRR 94
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana
GN=COL5 PE=2 SV=2
Length = 355
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C+S A +FC D A LC +CD ++H +RH RV + C++CE APA
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV--------CEVCEQAPA 69
Query: 65 FFYCEIDGSSLCLQCDMTVH 84
C+ D ++LC+ CD +H
Sbjct: 70 AVTCKADAAALCVSCDADIH 89
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRV 45
+C+VCE A A + C AD AALC SCD +H N LASRH RV
Sbjct: 60 VCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
C+ C A+LFC AD A LC CD+ VH N L+ +HVR + CD C P
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI--------CDNCSKEPV 63
Query: 65 FFYCEIDGSSLCLQCDMTVH 84
C D LC +CD VH
Sbjct: 64 SVRCFTDNLVLCQECDWDVH 83
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 45 VGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVH 84
+G + V C+ C A +C D + LCL CD VH
Sbjct: 1 MGTSTTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVH 40
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C +A ++++C AD A LC SCD +VH N++ASRH RV + C+ CE APA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV--------CEACERAPA 86
Query: 65 FFYCEIDGSSLCLQCDMTVH 84
C D ++LC+ CD+ VH
Sbjct: 87 ALACRADAAALCVACDVQVH 106
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 56 CDICENAPAFFYCEIDGSSLCLQCDMTVHVGGK 88
CD C AP+ YC D + LC CD VH +
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANR 67
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M +CD C ++++C +D A LC SCD VH N L+ RH R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV--------CERCN 52
Query: 61 NAPAFFYCEIDGSSLCLQCDMTVHVGGKRT 90
PA C + SLC CD + H G T
Sbjct: 53 AQPASVRCSDERVSLCQNCDWSGHDGKNST 82
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana
GN=COL9 PE=2 SV=1
Length = 372
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M +CD C ++++C +D A LC SCD VH N L+ RH R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV--------CERCN 52
Query: 61 NAPAFFYCEIDGSSLCLQCDMTVH 84
PA C + SLC CD + H
Sbjct: 53 AQPATVRCVEERVSLCQNCDWSGH 76
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M CD C + A+++C +D A LC +CD VH N L+ RH R L C+ C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL--------CEKCS 52
Query: 61 NAPAFFYCEIDGSSLCLQCDMT 82
P +C + SLC C T
Sbjct: 53 LQPTAVHCMNENVSLCQGCQWT 74
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 55 RCDICENAPAFFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLL 96
RCD C A YC+ D + LCL CD+ VH + H R LL
Sbjct: 4 RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M CD C ++ A+++C +D A LC +CD VH N L+ RH+R + C+ C
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI--------CEKCF 52
Query: 61 NAPAFFYCEIDGSSLCLQC 79
+ PA C + S C C
Sbjct: 53 SQPAAIRCLDEKVSYCQGC 71
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 54 PRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRTH 91
P+CD C + A YC+ D + LCL CD+ VH +H
Sbjct: 3 PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSH 40
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL--ANPSDVPRCDICENA 62
CD C A +CAAD+A LC+SCD VH N LA RH RV L A+P+ V + +
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVKHSNHSSAS 76
Query: 63 P 63
P
Sbjct: 77 P 77
Score = 30.4 bits (67), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 56 CDICENAPAFFYCEIDGSSLCLQCDMTVHVGG--KRTHGRYLL 96
CD C A +YC D + LC CD VH R H R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana
GN=COL8 PE=2 SV=2
Length = 319
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL 47
C++C + A+ +CA+D+A LC CDE VH N +A++H RV L
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 63
Score = 33.9 bits (76), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 54 PR-CDICENAPAFFYCEIDGSSLCLQCDMTVH 84
PR C++C N A +YC D + LC CD +VH
Sbjct: 18 PRACELCLNKHAVWYCASDDAFLCHVCDESVH 49
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana
GN=COL6 PE=2 SV=2
Length = 406
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS 51
CD C A +CAAD+A LC +CD VH N LA RH RV L + S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
Score = 30.4 bits (67), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 56 CDICENAPAFFYCEIDGSSLCLQCDMTVH 84
CD C A +YC D + LC CD +VH
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVH 45
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana
GN=COL7 PE=2 SV=1
Length = 392
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 5 CDVC-ESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCD 57
CD C + + A +C AD+A LC+SCD +H N LA RH RV L + S D
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETAD 75
>sp|Q9HBF4|ZFYV1_HUMAN Zinc finger FYVE domain-containing protein 1 OS=Homo sapiens
GN=ZFYVE1 PE=1 SV=1
Length = 777
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 13 AILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAP--------- 63
AI C + C C+E++H +L + H R+ L P VP CD+C+
Sbjct: 30 AIFECDECCSLQCLRCEEELHRQERLRN-HERIRL-KPGHVPYCDLCKGLSGHLPGVRQR 87
Query: 64 AFFYCEIDGSSLCLQCDMTVHVGG-KRTH 91
A C+ +LCL+C H GG KR H
Sbjct: 88 AIVRCQTCKINLCLECQKRTHSGGNKRRH 116
>sp|Q5RFL4|ZFYV1_PONAB Zinc finger FYVE domain-containing protein 1 OS=Pongo abelii
GN=ZFYVE1 PE=2 SV=1
Length = 789
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 13 AILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAP--------- 63
AI C + C C+E++H +L + H R+ L P VP CD+C+
Sbjct: 30 AIFECDECCSLQCLRCEEELHRQERLRN-HERIRL-KPGHVPYCDLCKGLSGHLPGVRQR 87
Query: 64 AFFYCEIDGSSLCLQCDMTVHVGG-KRTH 91
A C+ +LCL+C H GG KR H
Sbjct: 88 AIVRCQTCKINLCLECQKRTHSGGNKRRH 116
>sp|Q09654|TRI23_CAEEL E3 ubiquitin-protein ligase arc-1 OS=Caenorhabditis elegans
GN=arc-1 PE=3 SV=3
Length = 539
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLA-NPSDVPRCDICENAP 63
CD A+++C ++ LC C E H N L S+H R+ L P + C + +
Sbjct: 108 CDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVHCRLHSSYV 166
Query: 64 AFFYCE---IDGSSLCLQCDMTVHVGGKRTHGRYLL------LRQRV-EFPGDKAGRLEE 113
F C+ D S L C M G + H L+ LR++V E G+ + + E
Sbjct: 167 VEFVCKELSCDTES-PLMCMMCRDYGRHKGHSHVLIEKEVEDLREKVREHLGELSKQSET 225
Query: 114 L--ALQSLDQ--NKITRDQTQPFRITARENQQNH 143
+ AL S+D +++T Q R+ +NH
Sbjct: 226 IGNALHSIDSVIHELTPGQEDGSLEETRQEVRNH 259
>sp|Q5JFR5|HISX_PYRKO Histidinol dehydrogenase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=hisD PE=3 SV=1
Length = 376
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 2 RTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICEN 61
R L D C E LCR+ +E N++A H+ + NP ++ D+ EN
Sbjct: 243 RELADYCSREGI-------EVLLCRNLEECAEKANEIAPEHLEIITENPEEL--VDLIEN 293
Query: 62 APAFF---YCEIDGSSLCLQCDMTVHVGG 87
A A + Y + + L + + GG
Sbjct: 294 AGAIYLGPYTPVPAADYFLGVNHVLPTGG 322
>sp|Q810J8|ZFYV1_MOUSE Zinc finger FYVE domain-containing protein 1 OS=Mus musculus
GN=Zfyve1 PE=2 SV=2
Length = 777
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 13 AILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE----NAP----- 63
AI C + C C+E++H +L + H R+ L VP CD C+ ++P
Sbjct: 30 AIFECDECCSLQCLRCEEELHRQERLRN-HERIRL-KAGHVPYCDPCKGPNGHSPGVRQR 87
Query: 64 AFFYCEIDGSSLCLQCDMTVHVGG-KRTHGRYLLLRQRVE 102
A C+ +LCL+C H GG KR H + L +V+
Sbjct: 88 AAVRCQTCKINLCLECQKRTHSGGNKRRHPITVYLVSKVQ 127
>sp|Q008X6|R1AB_WBV24 Replicase polyprotein 1ab OS=White bream virus (isolate Blicca
bjoerkna L./Germany/DF24/00) GN=rep PE=1 SV=1
Length = 6872
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 7 VCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
+ +SA+ FC + C C + MC A H+ + P+ V C +C+
Sbjct: 5394 IMQSASQCYFCDNATVSTCSDCTVQYPMCAHCAYEHLMLTDHTPTQVLPCHVCD 5447
>sp|P0C6X4|R1AB_CVHN5 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N5)
GN=rep PE=3 SV=1
Length = 7132
Score = 31.6 bits (70), Expect = 3.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 7 VCESAAAILFCAADEAALCRSCDEKVHMCNK------LASRHVRVGLANP--SDVPRCDI 58
V +S A + C++ + C SC K +C K +A+ H V +P + P CD+
Sbjct: 5333 VMQSVGACVVCSSQTSLRCGSCIRKPLLCCKCCYDHVMATNHKYVLSVSPYVCNAPNCDV 5392
Query: 59 CENAPAF-----FYCE 69
+ + +YCE
Sbjct: 5393 SDVTKLYLGGMSYYCE 5408
>sp|P0C6X3|R1AB_CVHN2 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N2)
GN=rep PE=3 SV=1
Length = 7152
Score = 31.6 bits (70), Expect = 3.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 7 VCESAAAILFCAADEAALCRSCDEKVHMCNK------LASRHVRVGLANP--SDVPRCDI 58
V +S A + C++ + C SC K +C K +A+ H V +P + P CD+
Sbjct: 5353 VMQSVGACVVCSSQTSLRCGSCIRKPLLCCKCCYDHVMATNHKYVLSVSPYVCNAPNCDV 5412
Query: 59 CENAPAF-----FYCE 69
+ + +YCE
Sbjct: 5413 SDVTKLYLGGMSYYCE 5428
>sp|P0C6X2|R1AB_CVHN1 Replicase polyprotein 1ab OS=Human coronavirus HKU1 (isolate N1)
GN=rep PE=3 SV=1
Length = 7182
Score = 31.6 bits (70), Expect = 3.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 7 VCESAAAILFCAADEAALCRSCDEKVHMCNK------LASRHVRVGLANP--SDVPRCDI 58
V +S A + C++ + C SC K +C K +A+ H V +P + P CD+
Sbjct: 5383 VMQSVGACVVCSSQTSLRCGSCIRKPLLCCKCCYDHVMATNHKYVLSVSPYVCNAPNCDV 5442
Query: 59 CENAPAF-----FYCE 69
+ + +YCE
Sbjct: 5443 SDVTKLYLGGMSYYCE 5458
>sp|O14157|MYO3_SCHPO Myosin type-2 heavy chain 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=myo3 PE=1 SV=1
Length = 2104
Score = 31.2 bits (69), Expect = 5.4, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 140 QQNHRGSPVPMLDGNADGDGKVDNKLI 166
++ H G P+ +DGN D D K+DNKL+
Sbjct: 1263 EEKHSGDPLKRIDGNND-DRKIDNKLL 1288
>sp|Q60MF5|RN207_CAEBR Probable RING finger protein 207 homolog OS=Caenorhabditis briggsae
GN=CBG23170 PE=4 SV=3
Length = 836
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 5 CDVCESAA-AILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE--N 61
C CE + +C + +LC +C H ++ S H + S V +C+ N
Sbjct: 73 CANCEQITLPMFYCETCQQSLCLACRNVTHQA-RMFSSHKIISSEERSKVYSSSLCKDHN 131
Query: 62 APAFFYCEIDGSSLCLQC 79
P YC +C+QC
Sbjct: 132 EPYILYCSDVRKLVCIQC 149
>sp|Q8K120|NFAC4_MOUSE Nuclear factor of activated T-cells, cytoplasmic 4 OS=Mus musculus
GN=Nfatc4 PE=1 SV=2
Length = 901
Score = 30.8 bits (68), Expect = 7.0, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 18 AADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPR 55
A+DEAAL +CDE N+ AS R GL++P PR
Sbjct: 185 ASDEAALYAACDEVESELNEAAS---RFGLSSPLPSPR 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,550,571
Number of Sequences: 539616
Number of extensions: 3594253
Number of successful extensions: 7242
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 7135
Number of HSP's gapped (non-prelim): 87
length of query: 208
length of database: 191,569,459
effective HSP length: 112
effective length of query: 96
effective length of database: 131,132,467
effective search space: 12588716832
effective search space used: 12588716832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)