Your job contains 1 sequence.
>028520
MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE
NAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGRYLLLRQRVEFPGDKAGRLEELALQSLD
QNKITRDQTQPFRITARENQQNHRGSPVPMLDGNADGDGKVDNKLIDLNARPNRGQASNN
QGMDVLSGTNHDSAGVVPVGSFKREPEN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028520
(208 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 529 4.2e-57 2
TAIR|locus:2198841 - symbol:STO "SALT TOLERANCE" species:... 269 2.3e-23 1
TAIR|locus:2120207 - symbol:BZS1 "BZS1" species:3702 "Ara... 248 3.9e-21 1
TAIR|locus:2005624 - symbol:BBX21 "B-box domain protein 2... 247 4.9e-21 1
TAIR|locus:2061330 - symbol:STH "salt tolerance homologue... 242 1.7e-20 1
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 210 2.0e-19 2
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 223 1.7e-18 1
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 194 5.5e-18 2
TAIR|locus:2122759 - symbol:bbx23 "B-box domain protein 2... 216 9.5e-18 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 218 1.0e-17 1
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 194 9.7e-17 2
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 210 1.1e-16 1
UNIPROTKB|Q9FRZ7 - symbol:Hd1 "Hd1 protein" species:39946... 200 9.9e-16 1
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 199 2.3e-15 1
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 193 5.5e-15 1
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 183 1.7e-13 1
TAIR|locus:2199262 - symbol:BBX27 "B-box domain protein 2... 170 2.7e-12 1
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 165 9.5e-12 1
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 164 1.7e-11 1
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 151 1.1e-09 1
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 144 2.6e-08 1
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 140 8.1e-08 1
TAIR|locus:2095562 - symbol:BBX31 "B-box domain protein 3... 115 7.5e-07 1
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 127 3.0e-06 2
TAIR|locus:2092940 - symbol:BBX32 "B-box domain protein 3... 116 3.2e-06 2
TAIR|locus:1009023318 - symbol:BBX30 "B-box domain protei... 107 6.3e-06 1
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 126 7.0e-06 1
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 123 1.9e-05 1
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 122 2.6e-05 1
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 119 4.1e-05 1
TAIR|locus:2195643 - symbol:BBX26 "B-box domain protein 2... 113 0.00012 1
WB|WBGene00000180 - symbol:arc-1 species:6239 "Caenorhabd... 117 0.00016 1
UNIPROTKB|Q09654 - symbol:arc-1 "E3 ubiquitin-protein lig... 117 0.00016 1
TAIR|locus:2131709 - symbol:BBX28 "B-box domain protein 2... 109 0.00028 1
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 529 (191.3 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 95/117 (81%), Positives = 104/117 (88%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
MR LCD CESAAAI+FCAADEAALC SCDEKVH CNKLASRH+RVGLA+PS+ P CDICE
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60
Query: 61 NAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGRYLLLRQRVEFPGDKAGRLEELALQ 117
NAPAFFYCEIDGSSLCLQCDM VHVGGKRTH R+LLLRQR+EFPGDK ++L L+
Sbjct: 61 NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLR 117
Score = 76 (31.8 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 155 ADGDGKVDNKLIDLNARPNR----GQASNNQGMDVLSGTNHD 192
++G+G D+ +IDLN+ P R G + +G+DV + NH+
Sbjct: 129 SNGNGDHDHNMIDLNSNPQRVHEPGSHNQEEGIDVNNANNHE 170
>TAIR|locus:2198841 [details] [associations]
symbol:STO "SALT TOLERANCE" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009640 "photomorphogenesis" evidence=IGI]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=IGI;RCA] [GO:0009737 "response
to abscisic acid stimulus" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0080167 GO:GO:0009640 EMBL:AC024174 HOGENOM:HOG000239240
ProtClustDB:CLSN2682276 EMBL:X95572 EMBL:AY079377 EMBL:AY045794
IPI:IPI00518701 PIR:E86195 RefSeq:NP_172094.1 UniGene:At.23289
UniGene:At.38035 UniGene:At.70752 ProteinModelPortal:Q96288
SMR:Q96288 IntAct:Q96288 MINT:MINT-189223 STRING:Q96288
EnsemblPlants:AT1G06040.1 GeneID:837113 KEGG:ath:AT1G06040
TAIR:At1g06040 eggNOG:NOG313367 InParanoid:Q96288 OMA:PRCDICQ
PhylomeDB:Q96288 Genevestigator:Q96288 Uniprot:Q96288
Length = 248
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 58/152 (38%), Positives = 82/152 (53%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSD-VPRCDIC 59
M+ CDVCE A A + C ADEAALC CD ++H NKLAS+H R+ L + S PRCDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 60 ENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLLLRQRVEFPGDKAGRLEELALQ 117
+ AF +C D + LC CD ++HV R+ H R+L +V + E
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120
Query: 118 SLDQNKITRDQTQPFRITARENQQNHRGSPVP 149
N+ +Q P + T+++ QQ +P+P
Sbjct: 121 EPSNNQQKANQI-PAKSTSQQQQQPSSATPLP 151
>TAIR|locus:2120207 [details] [associations]
symbol:BZS1 "BZS1" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0080167
GO:GO:0010200 EMBL:AL035679 EMBL:AL161594 EMBL:AK118879
EMBL:BT028893 IPI:IPI00535007 PIR:T06067 RefSeq:NP_195618.2
UniGene:At.31120 ProteinModelPortal:Q0IGM7 SMR:Q0IGM7 PRIDE:Q0IGM7
EnsemblPlants:AT4G39070.1 GeneID:830062 KEGG:ath:AT4G39070
TAIR:At4g39070 eggNOG:NOG257043 HOGENOM:HOG000239240
InParanoid:Q0IGM7 OMA:DICGERR PhylomeDB:Q0IGM7
ProtClustDB:CLSN2915067 Genevestigator:Q0IGM7 GO:GO:0009741
Uniprot:Q0IGM7
Length = 242
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 45/100 (45%), Positives = 60/100 (60%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS--DVPRCDI 58
M+ C VC+ A +FC ADEAALC CD VH NKLA +H+R L +P+ D P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 59 CENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLL 96
C A +C+ D + LC +CD+ +H + T H R+LL
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLL 100
Score = 131 (51.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVR---VGL---ANPSDVPRCD 57
LCD+C A+LFC D A LCR CD +H N+ +H R G+ A+PS PR
Sbjct: 57 LCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRAS 116
Query: 58 ICENAPAF 65
+A AF
Sbjct: 117 NSNSAAAF 124
>TAIR|locus:2005624 [details] [associations]
symbol:BBX21 "B-box domain protein 21" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009641 "shade avoidance"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0009641 HOGENOM:HOG000239240 EMBL:AC006434
EMBL:AB493536 IPI:IPI00536705 PIR:G96785 RefSeq:NP_177686.1
UniGene:At.34761 UniGene:At.69592 ProteinModelPortal:Q9LQZ7
SMR:Q9LQZ7 IntAct:Q9LQZ7 STRING:Q9LQZ7 EnsemblPlants:AT1G75540.1
GeneID:843890 KEGG:ath:AT1G75540 TAIR:At1g75540 eggNOG:NOG315170
InParanoid:Q9LQZ7 OMA:CDICQDK PhylomeDB:Q9LQZ7
ProtClustDB:CLSN2682536 Genevestigator:Q9LQZ7 GermOnline:AT1G75540
Uniprot:Q9LQZ7
Length = 331
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 46/102 (45%), Positives = 62/102 (60%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDV----PRC 56
M+ CDVC+ A +FC ADEA+LC CD +VH NKLAS+H+R L PS P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 57 DICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLL 96
DIC++ A +C+ D + LC CD ++H + T H R+LL
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>TAIR|locus:2061330 [details] [associations]
symbol:STH "salt tolerance homologue" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0019904 "protein domain specific binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC007169 HOGENOM:HOG000239240 UniGene:At.24192
UniGene:At.69838 EMBL:AF323666 EMBL:AF325077 EMBL:AF370311
EMBL:AY063097 IPI:IPI00545007 PIR:A84720 RefSeq:NP_565722.1
ProteinModelPortal:Q9SID1 SMR:Q9SID1 IntAct:Q9SID1 STRING:Q9SID1
EnsemblPlants:AT2G31380.1 GeneID:817696 KEGG:ath:AT2G31380
TAIR:At2g31380 eggNOG:NOG279894 InParanoid:Q9SID1 OMA:CAKCDVE
PhylomeDB:Q9SID1 ProtClustDB:CLSN2682276 Genevestigator:Q9SID1
GermOnline:AT2G31380 Uniprot:Q9SID1
Length = 238
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/134 (40%), Positives = 70/134 (52%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSD-VPRCDIC 59
M+ CDVCE A A L C ADEAALC CD +VH NKLAS+H R+ L + S P CDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 60 ENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLLLRQRVEFPGDKAGR-LEELAL 116
AF +C D + LC CD H R+ H R+L RV + +E+
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF 120
Query: 117 QSLDQNKITRDQTQ 130
+Q +++ TQ
Sbjct: 121 DPSNQQSLSKPPTQ 134
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 210 (79.0 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 42/95 (44%), Positives = 54/95 (56%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C SAA ++C AD A LC +CD +VH N++ASRH RV + C CE+APA
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV--------CQSCESAPA 67
Query: 65 FFYCEIDGSSLCLQCDMTVHVGGK--RTHGRYLLL 97
F C+ D +SLC CD +H R H R +L
Sbjct: 68 AFLCKADAASLCTACDAEIHSANPLARRHQRVPIL 102
Score = 125 (49.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRC 56
+C CESA A C AD A+LC +CD ++H N LA RH RV + P C
Sbjct: 58 VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPIL-PLSANSC 109
Score = 41 (19.5 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 150 MLDGNADGDGKVDNKLIDLNARPNRGQASNNQGMDVLSGTNH 191
M D D D++ + PN G+ NQ L G +
Sbjct: 112 MAPSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGVEY 153
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 45/92 (48%), Positives = 54/92 (58%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAP 63
LCD C+S AA LFC AD A LC CD K+H NKLASRH RV L C++CE AP
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL--------CEVCEQAP 58
Query: 64 AFFYCEIDGSSLCLQCDMTVHVGG--KRTHGR 93
A C+ D ++LC+ CD +H R H R
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
Score = 125 (49.1 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRV 45
LC+VCE A A + C AD AALC +CD +H N L+ RH RV
Sbjct: 50 LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 194 (73.4 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 38/91 (41%), Positives = 53/91 (58%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C +A ++++C AD A LC SCD +VH N++ASRH RV + C+ CE APA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV--------CEACERAPA 86
Query: 65 FFYCEIDGSSLCLQCDMTVHVGGK--RTHGR 93
C D ++LC+ CD+ V+ R H R
Sbjct: 87 ALACRADAAALCVACDVQVYSANPLARRHQR 117
Score = 123 (48.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLA 48
+C+ CE A A L C AD AALC +CD +V+ N LA RH RV +A
Sbjct: 77 VCEACERAPAALACRADAAALCVACDVQVYSANPLARRHQRVPVA 121
Score = 38 (18.4 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 156 DGDGKVDNKLIDLNARPNRGQASNNQGMDVLSGTNHDSA 194
D D +VD+ L+ N +NN D N +S+
Sbjct: 147 DKDEEVDSWLLLSKDSDNNNNNNNNNDNDNNDNNNSNSS 185
>TAIR|locus:2122759 [details] [associations]
symbol:bbx23 "B-box domain protein 23" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AF096373 EMBL:AL161516 HOGENOM:HOG000239240
EMBL:AL049488 EMBL:AY122916 IPI:IPI00525768 PIR:T01973
RefSeq:NP_192762.1 UniGene:At.33641 ProteinModelPortal:O82617
SMR:O82617 EnsemblPlants:AT4G10240.1 GeneID:826615
KEGG:ath:AT4G10240 TAIR:At4g10240 eggNOG:NOG273282
InParanoid:O82617 OMA:TENSECS PhylomeDB:O82617
ProtClustDB:CLSN2915973 Genevestigator:O82617 Uniprot:O82617
Length = 162
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 44/103 (42%), Positives = 56/103 (54%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL-------ANPSDV 53
M+ C+VCE A A + C +DEA LC+ CD KVH NKL RH RV L S
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 54 PRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGRYLL 96
P CDIC+ +F+C D + LC CD +H +H R+LL
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN--SHQRFLL 101
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 218 (81.8 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 44/95 (46%), Positives = 54/95 (56%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C SAA ++C AD A LC SCD +VH N+LASRH RV + C CE APA
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV--------CQSCERAPA 63
Query: 65 FFYCEIDGSSLCLQCDMTVHVGGK--RTHGRYLLL 97
F+C+ D +SLC CD +H R H R +L
Sbjct: 64 AFFCKADAASLCTTCDSEIHSANPLARRHQRVPIL 98
Score = 126 (49.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRV 45
+C CE A A FC AD A+LC +CD ++H N LA RH RV
Sbjct: 54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRV 95
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 194 (73.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 38/91 (41%), Positives = 53/91 (58%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C +A ++++C AD A LC SCD +VH N++ASRH RV + C+ CE APA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV--------CEACERAPA 86
Query: 65 FFYCEIDGSSLCLQCDMTVHVGGK--RTHGR 93
C D ++LC+ CD+ V+ R H R
Sbjct: 87 ALACRADAAALCVACDVQVYSANPLARRHQR 117
Score = 123 (48.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLA 48
+C+ CE A A L C AD AALC +CD +V+ N LA RH RV +A
Sbjct: 77 VCEACERAPAALACRADAAALCVACDVQVYSANPLARRHQRVPVA 121
Score = 38 (18.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 156 DGDGKVDNKLIDLNARPNRGQASNNQGMDVLSGTNHDSA 194
D D +VD+ L+ N +NN D N +S+
Sbjct: 147 DKDEEVDSWLLLSKDSDNNNNNNNNNDNDNNDNNNSNSS 185
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 210 (79.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/95 (46%), Positives = 53/95 (55%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C S A ++C AD A LC SCD +VH N++ASRH RV + C+ CE APA
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV--------CESCERAPA 71
Query: 65 FFYCEIDGSSLCLQCDMTVHVGGK--RTHGRYLLL 97
F CE D +SLC CD VH R H R +L
Sbjct: 72 AFLCEADDASLCTACDSEVHSANPLARRHQRVPIL 106
Score = 126 (49.4 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRV 45
+C+ CE A A C AD+A+LC +CD +VH N LA RH RV
Sbjct: 62 VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRV 103
>UNIPROTKB|Q9FRZ7 [details] [associations]
symbol:Hd1 "Hd1 protein" species:39946 "Oryza sativa Indica
Group" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041839 EMBL:AB564434 Gramene:Q9FRZ7
Uniprot:Q9FRZ7
Length = 342
Score = 200 (75.5 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 39/91 (42%), Positives = 53/91 (58%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C +A ++++C AD A LC SCD +VH N++ASRH RV + C+ CE APA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV--------CEACEQAPA 86
Query: 65 FFYCEIDGSSLCLQCDMTVHVGGK--RTHGR 93
C D ++LC+ CD+ VH R H R
Sbjct: 87 ALACRADAAALCVACDVQVHSANPLARRHQR 117
Score = 130 (50.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLA 48
+C+ CE A A L C AD AALC +CD +VH N LA RH RV +A
Sbjct: 77 VCEACEQAPAALACRADAAALCVACDVQVHSANPLARRHQRVPVA 121
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 199 (75.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C +A ++++C AD A LC SCD +VH N++ASRH RV + C+ CE APA
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV--------CEACERAPA 86
Query: 65 FFYCEIDGSSLCLQCDMTVH 84
C D ++LC+ CD+ VH
Sbjct: 87 ALACRADAAALCVACDVQVH 106
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 193 (73.0 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 35/90 (38%), Positives = 51/90 (56%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAP 63
LCD C+S+ A+++C AD A LC +CD++VH+ N+L ++H R L CD C +P
Sbjct: 12 LCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL--------CDSCNESP 63
Query: 64 AFFYCEIDGSSLCLQCDMTVHVGGKRTHGR 93
+ +CE + S LC CD H H R
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASSSLHSR 93
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 183 (69.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 49/128 (38%), Positives = 62/128 (48%)
Query: 2 RTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICEN 61
R CD C A+LFC AD A LC CD++VH N L+ +HVR S + CD C N
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR------SQI--CDNCGN 57
Query: 62 APAFFYCEIDGSSLCLQCDMTVHVGGKRTHGRYLLLRQRVE-FPGDKAGRLEELALQSLD 120
P C D LC +CD VH G ++ R VE F G + LE AL LD
Sbjct: 58 EPVSVRCFTDNLILCQECDWDVH-GSCSVSDAHV--RSAVEGFSGCPSA-LELAALWGLD 113
Query: 121 QNKITRDQ 128
+ +D+
Sbjct: 114 LEQGRKDE 121
>TAIR|locus:2199262 [details] [associations]
symbol:BBX27 "B-box domain protein 27" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016447 EMBL:AK117800 IPI:IPI00522806
PIR:C96705 RefSeq:NP_176986.1 UniGene:At.35557
ProteinModelPortal:Q9C9F4 EnsemblPlants:AT1G68190.1 GeneID:843148
KEGG:ath:AT1G68190 TAIR:At1g68190 eggNOG:NOG293044
HOGENOM:HOG000111890 InParanoid:Q9C9F4 OMA:CIADTAN PhylomeDB:Q9C9F4
ProtClustDB:CLSN2717503 Genevestigator:Q9C9F4 GermOnline:AT1G68190
Uniprot:Q9C9F4
Length = 356
Score = 170 (64.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 35/93 (37%), Positives = 47/93 (50%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M +C+ C++ A+++C AD A LC +CD KVH N L+ RH+R L CD C+
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL--------CDSCK 61
Query: 61 NAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGR 93
N P C LC C+ H GG H R
Sbjct: 62 NQPCVVRCFDHKMFLCHGCNDKFHGGGSSEHRR 94
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 165 (63.1 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
CD C+S A +FC D A LC +CD ++H +RH RV + C++CE APA
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV--------CEVCEQAPA 69
Query: 65 FFYCEIDGSSLCLQCDMTVH 84
C+ D ++LC+ CD +H
Sbjct: 70 AVTCKADAAALCVSCDADIH 89
Score = 134 (52.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 4 LCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRV 45
+C+VCE A A + C AD AALC SCD +H N LASRH RV
Sbjct: 60 VCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 164 (62.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 36/91 (39%), Positives = 43/91 (47%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICENAPA 64
C+ C A+LFC AD A LC CD+ VH N L+ +HVR S + CD C P
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR------SQI--CDNCSKEPV 63
Query: 65 FFYCEIDGSSLCLQCDMTVH--VGGKRTHGR 93
C D LC +CD VH TH R
Sbjct: 64 SVRCFTDNLVLCQECDWDVHGSCSSSATHER 94
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/90 (35%), Positives = 43/90 (47%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M +CD C ++++C +D A LC SCD VH N L+ RH R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV--------CERCN 52
Query: 61 NAPAFFYCEIDGSSLCLQCDMTVHVGGKRT 90
PA C + SLC CD + H G T
Sbjct: 53 AQPASVRCSDERVSLCQNCDWSGHDGKNST 82
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 144 (55.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/84 (35%), Positives = 41/84 (48%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M +CD C ++++C +D A LC SCD VH N L+ RH R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV--------CERCN 52
Query: 61 NAPAFFYCEIDGSSLCLQCDMTVH 84
PA C + SLC CD + H
Sbjct: 53 AQPATVRCVEERVSLCQNCDWSGH 76
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 140 (54.3 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 29/82 (35%), Positives = 39/82 (47%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M CD C + A+++C +D A LC +CD VH N L+ RH R L C+ C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL--------CEKCS 52
Query: 61 NAPAFFYCEIDGSSLCLQCDMT 82
P +C + SLC C T
Sbjct: 53 LQPTAVHCMNENVSLCQGCQWT 74
>TAIR|locus:2095562 [details] [associations]
symbol:BBX31 "B-box domain protein 31" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010224 "response to UV-B" evidence=IEP;RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] InterPro:IPR000315
Pfam:PF00643 SMART:SM00336 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 GO:GO:0010224
EMBL:AB028622 EMBL:AY086564 EMBL:AB493627 IPI:IPI00531471
RefSeq:NP_188827.1 UniGene:At.37979 ProteinModelPortal:Q9LRM4
EnsemblPlants:AT3G21890.1 GeneID:821744 KEGG:ath:AT3G21890
TAIR:At3g21890 eggNOG:NOG259331 HOGENOM:HOG000090727
InParanoid:Q9LRM4 OMA:CEADSAF PhylomeDB:Q9LRM4
ProtClustDB:CLSN2685268 Genevestigator:Q9LRM4 Uniprot:Q9LRM4
Length = 121
Score = 115 (45.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVR 44
C++C+ A++ FC AD A LCR CD VH N LA RHVR
Sbjct: 31 CELCDGDASV-FCEADSAFLCRKCDRWVHGANFLAWRHVR 69
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 127 (49.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL--ANPSDVPRCDICENA 62
CD C A +CAAD+A LC+SCD VH N LA RH RV L A+P+ V + +
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVKHSNHSSAS 76
Query: 63 P 63
P
Sbjct: 77 P 77
Score = 37 (18.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 111 LEELALQSLDQNKITRDQTQ 130
+EEL L + + KI +D+ +
Sbjct: 207 MEELGLSNSEMFKIEKDEIE 226
>TAIR|locus:2092940 [details] [associations]
symbol:BBX32 "B-box domain protein 32" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0009785 "blue
light signaling pathway" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0009909 "regulation of
flower development" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003700 EMBL:AP000604
GO:GO:0009640 GO:GO:0010200 GO:GO:0009909 EMBL:BT005244
EMBL:AK117844 IPI:IPI00537563 RefSeq:NP_188752.1 UniGene:At.38107
IntAct:Q9LJB7 EnsemblPlants:AT3G21150.1 GeneID:821667
KEGG:ath:AT3G21150 TAIR:At3g21150 eggNOG:NOG279642
HOGENOM:HOG000090878 InParanoid:Q9LJB7 OMA:IISAVEM PhylomeDB:Q9LJB7
ProtClustDB:CLSN2915650 Genevestigator:Q9LJB7 Uniprot:Q9LJB7
Length = 225
Score = 116 (45.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 24/44 (54%), Positives = 28/44 (63%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVR 44
M + C++C A A L CAAD A LCRSCD K H N L +RH R
Sbjct: 1 MVSFCELC-GAEADLHCAADSAFLCRSCDAKFHASNFLFARHFR 43
Score = 40 (19.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 116 LQSLDQNKITRDQTQPFRITARENQQNHRGSPVPMLDG 153
+ S + + TRD R REN+ N + V + DG
Sbjct: 87 VSSSELSSTTRDVN---RARGRENRVNAKAVAVTVADG 121
>TAIR|locus:1009023318 [details] [associations]
symbol:BBX30 "B-box domain protein 30" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270
GO:GO:0005622 EMBL:DQ487602 IPI:IPI00657516 RefSeq:NP_001031645.1
UniGene:At.63271 EnsemblPlants:AT4G15248.1 GeneID:3769879
KEGG:ath:AT4G15248 TAIR:At4g15248 OMA:ELCGENA PhylomeDB:Q1G3I2
Genevestigator:Q2V3I2 Uniprot:Q1G3I2
Length = 117
Score = 107 (42.7 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVR 44
C++C A + +C AD A LCR CD VH N LA RH+R
Sbjct: 32 CELCGENATV-YCEADAAFLCRKCDRWVHSANFLARRHLR 70
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 126 (49.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M CD C ++ A+++C +D A LC +CD VH N L+ RH+R + C+ C
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI--------CEKCF 52
Query: 61 NAPAFFYCEIDGSSLCLQC 79
+ PA C + S C C
Sbjct: 53 SQPAAIRCLDEKVSYCQGC 71
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 5 CDVC-ESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCD 57
CD C + + A +C AD+A LC+SCD +H N LA RH RV L + S D
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETAD 75
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 122 (48.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPS 51
CD C A +CAAD+A LC +CD VH N LA RH RV L + S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 119 (46.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGL 47
C++C + A+ +CA+D+A LC CDE VH N +A++H RV L
Sbjct: 28 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 70
>TAIR|locus:2195643 [details] [associations]
symbol:BBX26 "B-box domain protein 26" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008270 GO:GO:0003700 GO:GO:0005622
EMBL:AC004473 IPI:IPI00523867 PIR:T02277 RefSeq:NP_176231.1
UniGene:At.52283 ProteinModelPortal:O80748
EnsemblPlants:AT1G60250.1 GeneID:842320 KEGG:ath:AT1G60250
TAIR:At1g60250 eggNOG:NOG305480 HOGENOM:HOG000115139 OMA:FERSCHG
PhylomeDB:O80748 ProtClustDB:CLSN2913661 Genevestigator:O80748
Uniprot:O80748
Length = 251
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 24/79 (30%), Positives = 33/79 (41%)
Query: 1 MRTLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60
M +C C A++ C + C +CD H N + + HVR L CD C
Sbjct: 1 MAQVCHTCRHVTAVIHCVTEALNFCLTCDNLRHH-NNIHAEHVRYQL--------CDNCS 51
Query: 61 NAPAFFYCEIDGSSLCLQC 79
P+ +C DG LC C
Sbjct: 52 MYPSILFCYEDGMVLCQSC 70
>WB|WBGene00000180 [details] [associations]
symbol:arc-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003649 InterPro:IPR005225 InterPro:IPR006689
InterPro:IPR007087 InterPro:IPR024156 Pfam:PF00025 Pfam:PF00643
PRINTS:PR00328 PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS51417
SMART:SM00184 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG1100
GeneTree:ENSGT00700000104039 InterPro:IPR017907 EMBL:Z46934
PIR:T27752 RefSeq:NP_496089.3 ProteinModelPortal:Q09654 SMR:Q09654
MINT:MINT-3386265 PaxDb:Q09654 EnsemblMetazoa:ZK1320.6.1
EnsemblMetazoa:ZK1320.6.2 GeneID:174525 KEGG:cel:CELE_ZK1320.6
UCSC:ZK1320.6 CTD:174525 WormBase:ZK1320.6 InParanoid:Q09654
KO:K07963 OMA:RAVRCPF NextBio:884400 Uniprot:Q09654
Length = 539
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 51/191 (26%), Positives = 82/191 (42%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLAN-PSDVPRCDICENAP 63
CD A+++C ++ LC C E H N L S+H R+ L P + C + +
Sbjct: 108 CDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVHCRLHSSYV 166
Query: 64 AFFYC-EID-GSSLCLQCDMTVHVGGKRTHGRYLL------LRQRV-EFPGDKAGRLEEL 114
F C E+ + L C M G + H L+ LR++V E G+ + + E +
Sbjct: 167 VEFVCKELSCDTESPLMCMMCRDYGRHKGHSHVLIEKEVEDLREKVREHLGELSKQSETI 226
Query: 115 --ALQSLDQ--NKITRDQTQPFRITARENQQNHRGSPVPMLDGNADGDGKVDNKLIDLNA 170
AL S+D +++T Q R+ +NH LD D + V+ +D A
Sbjct: 227 GNALHSIDSVIHELTPGQEDGSLEETRQEVRNHFRRLRTALD--RDEEDAVET--VDRYA 282
Query: 171 RPNRGQASNNQ 181
R NR ++ Q
Sbjct: 283 R-NRVESLQTQ 292
>UNIPROTKB|Q09654 [details] [associations]
symbol:arc-1 "E3 ubiquitin-protein ligase arc-1"
species:6239 "Caenorhabditis elegans" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0046872 "metal ion binding" evidence=NAS]
[GO:0005525 "GTP binding" evidence=NAS] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003649 InterPro:IPR005225
InterPro:IPR006689 InterPro:IPR007087 InterPro:IPR024156
Pfam:PF00025 Pfam:PF00643 PRINTS:PR00328 PROSITE:PS50089
PROSITE:PS50119 PROSITE:PS51417 SMART:SM00184 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG1100 GeneTree:ENSGT00700000104039
InterPro:IPR017907 EMBL:Z46934 PIR:T27752 RefSeq:NP_496089.3
ProteinModelPortal:Q09654 SMR:Q09654 MINT:MINT-3386265 PaxDb:Q09654
EnsemblMetazoa:ZK1320.6.1 EnsemblMetazoa:ZK1320.6.2 GeneID:174525
KEGG:cel:CELE_ZK1320.6 UCSC:ZK1320.6 CTD:174525 WormBase:ZK1320.6
InParanoid:Q09654 KO:K07963 OMA:RAVRCPF NextBio:884400
Uniprot:Q09654
Length = 539
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 51/191 (26%), Positives = 82/191 (42%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLAN-PSDVPRCDICENAP 63
CD A+++C ++ LC C E H N L S+H R+ L P + C + +
Sbjct: 108 CDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVHCRLHSSYV 166
Query: 64 AFFYC-EID-GSSLCLQCDMTVHVGGKRTHGRYLL------LRQRV-EFPGDKAGRLEEL 114
F C E+ + L C M G + H L+ LR++V E G+ + + E +
Sbjct: 167 VEFVCKELSCDTESPLMCMMCRDYGRHKGHSHVLIEKEVEDLREKVREHLGELSKQSETI 226
Query: 115 --ALQSLDQ--NKITRDQTQPFRITARENQQNHRGSPVPMLDGNADGDGKVDNKLIDLNA 170
AL S+D +++T Q R+ +NH LD D + V+ +D A
Sbjct: 227 GNALHSIDSVIHELTPGQEDGSLEETRQEVRNHFRRLRTALD--RDEEDAVET--VDRYA 282
Query: 171 RPNRGQASNNQ 181
R NR ++ Q
Sbjct: 283 R-NRVESLQTQ 292
>TAIR|locus:2131709 [details] [associations]
symbol:BBX28 "B-box domain protein 28" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 SMART:SM00336 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AL030978 IPI:IPI00524555 PIR:T05755
RefSeq:NP_194461.1 UniGene:At.28344 EnsemblPlants:AT4G27310.1
GeneID:828839 KEGG:ath:AT4G27310 TAIR:At4g27310 eggNOG:NOG263097
HOGENOM:HOG000115162 InParanoid:O81834 OMA:SAFKSTV PhylomeDB:O81834
ProtClustDB:CLSN2916189 Genevestigator:O81834 Uniprot:O81834
Length = 223
Score = 109 (43.4 bits), Expect = 0.00028, P = 0.00028
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 5 CDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLANP--SDVP-RCDICEN 61
CD+C A ++C +D+A+LC CD KVH N L ++H R L + S P +
Sbjct: 5 CDLCNGVAR-MYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLRL 63
Query: 62 APAFFYCE 69
P F CE
Sbjct: 64 GPTFSVCE 71
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 208 208 0.00077 112 3 11 22 0.50 32
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 573 (61 KB)
Total size of DFA: 175 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.48u 0.12s 21.60t Elapsed: 00:00:01
Total cpu time: 21.49u 0.12s 21.61t Elapsed: 00:00:01
Start: Sat May 11 00:12:30 2013 End: Sat May 11 00:12:31 2013