Query 028523
Match_columns 208
No_of_seqs 138 out of 1792
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 12:50:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028523.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028523hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2130 Putative NADP-dependen 100.0 5.6E-34 1.2E-38 207.2 21.5 206 1-207 133-340 (340)
2 COG0604 Qor NADPH:quinone redu 100.0 3.8E-33 8.2E-38 213.8 22.5 198 2-205 126-326 (326)
3 PLN03154 putative allyl alcoho 100.0 4.7E-33 1E-37 216.5 23.1 207 2-208 142-348 (348)
4 KOG1197 Predicted quinone oxid 100.0 3.6E-33 7.9E-38 198.2 17.8 200 2-208 130-333 (336)
5 KOG1196 Predicted NAD-dependen 100.0 2.5E-31 5.4E-36 192.9 19.4 208 1-208 136-343 (343)
6 COG1064 AdhP Zn-dependent alco 100.0 4.4E-31 9.5E-36 198.8 20.0 188 2-206 151-338 (339)
7 cd08295 double_bond_reductase_ 100.0 5.9E-30 1.3E-34 198.7 23.0 204 2-205 135-338 (338)
8 cd08294 leukotriene_B4_DH_like 100.0 6.2E-30 1.4E-34 197.8 22.4 202 2-205 127-329 (329)
9 TIGR02825 B4_12hDH leukotriene 100.0 6.5E-30 1.4E-34 197.5 21.9 202 2-204 122-325 (325)
10 KOG1198 Zinc-binding oxidoredu 100.0 1.2E-29 2.6E-34 194.8 18.0 202 2-206 135-346 (347)
11 cd08293 PTGR2 Prostaglandin re 100.0 2.2E-28 4.8E-33 190.4 23.6 203 2-205 136-345 (345)
12 cd08281 liver_ADH_like1 Zinc-d 100.0 1.6E-27 3.5E-32 187.2 21.0 193 2-203 175-371 (371)
13 cd08291 ETR_like_1 2-enoyl thi 100.0 1.1E-26 2.4E-31 179.4 21.7 194 2-204 128-324 (324)
14 PRK09880 L-idonate 5-dehydroge 100.0 9.1E-27 2E-31 181.1 20.5 186 2-205 154-343 (343)
15 cd08239 THR_DH_like L-threonin 100.0 1.6E-26 3.6E-31 179.5 21.7 187 2-205 148-339 (339)
16 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.1E-26 4.5E-31 180.1 21.8 193 2-204 160-357 (358)
17 COG1062 AdhC Zn-dependent alco 100.0 6.4E-27 1.4E-31 173.5 17.0 192 3-204 170-365 (366)
18 KOG1202 Animal-type fatty acid 100.0 2.1E-27 4.5E-32 197.3 15.9 200 2-207 1536-1743(2376)
19 PLN02827 Alcohol dehydrogenase 99.9 1E-25 2.2E-30 177.2 21.6 195 2-206 177-377 (378)
20 TIGR03201 dearomat_had 6-hydro 99.9 1.1E-25 2.4E-30 175.4 21.5 190 2-205 151-349 (349)
21 KOG0023 Alcohol dehydrogenase, 99.9 7.1E-26 1.5E-30 166.3 18.1 191 2-207 166-356 (360)
22 PRK10309 galactitol-1-phosphat 99.9 1.5E-25 3.2E-30 174.7 20.9 195 3-205 146-346 (347)
23 KOG0024 Sorbitol dehydrogenase 99.9 1.8E-25 3.8E-30 164.6 19.0 192 2-207 154-354 (354)
24 PLN02586 probable cinnamyl alc 99.9 1.9E-25 4E-30 174.7 20.6 187 2-206 167-354 (360)
25 PLN02178 cinnamyl-alcohol dehy 99.9 3.8E-25 8.2E-30 173.6 21.6 186 2-206 161-349 (375)
26 cd08292 ETR_like_2 2-enoyl thi 99.9 3.7E-25 8.1E-30 170.8 21.2 195 2-204 124-324 (324)
27 cd08233 butanediol_DH_like (2R 99.9 3.7E-25 8E-30 172.7 21.3 187 2-203 157-350 (351)
28 TIGR02822 adh_fam_2 zinc-bindi 99.9 4E-25 8.6E-30 170.9 21.0 178 2-203 150-328 (329)
29 KOG0022 Alcohol dehydrogenase, 99.9 1.7E-25 3.8E-30 163.7 17.4 193 3-205 177-375 (375)
30 PLN02740 Alcohol dehydrogenase 99.9 4.9E-25 1.1E-29 173.6 21.4 194 2-205 182-381 (381)
31 KOG0025 Zn2+-binding dehydroge 99.9 1.9E-25 4.2E-30 161.6 17.0 198 2-205 144-352 (354)
32 PLN02514 cinnamyl-alcohol dehy 99.9 8.3E-25 1.8E-29 171.0 22.1 188 2-207 164-352 (357)
33 TIGR02818 adh_III_F_hyde S-(hy 99.9 1.5E-24 3.2E-29 170.2 21.7 194 2-205 169-368 (368)
34 cd08300 alcohol_DH_class_III c 99.9 2.2E-24 4.7E-29 169.3 21.7 193 2-204 170-368 (368)
35 cd05288 PGDH Prostaglandin deh 99.9 2.3E-24 4.9E-29 166.8 20.8 201 2-203 129-329 (329)
36 cd05282 ETR_like 2-enoyl thioe 99.9 2.9E-24 6.3E-29 165.7 20.9 196 2-204 122-323 (323)
37 cd08301 alcohol_DH_plants Plan 99.9 3.3E-24 7.1E-29 168.4 21.4 192 2-203 171-368 (369)
38 cd08238 sorbose_phosphate_red 99.9 2.1E-24 4.5E-29 171.5 20.2 185 12-206 169-369 (410)
39 cd08244 MDR_enoyl_red Possible 99.9 6.5E-24 1.4E-28 163.9 22.4 196 2-205 127-324 (324)
40 cd08277 liver_alcohol_DH_like 99.9 5.8E-24 1.2E-28 166.8 21.8 192 2-204 168-365 (365)
41 cd08246 crotonyl_coA_red croto 99.9 1E-23 2.2E-28 166.9 22.4 192 2-204 175-392 (393)
42 cd08296 CAD_like Cinnamyl alco 99.9 9.4E-24 2E-28 163.7 21.7 185 2-204 148-333 (333)
43 cd08231 MDR_TM0436_like Hypoth 99.9 7.4E-24 1.6E-28 166.0 20.3 191 2-205 161-361 (361)
44 cd08250 Mgc45594_like Mgc45594 99.9 3.4E-23 7.3E-28 160.3 22.3 201 2-204 123-329 (329)
45 cd08274 MDR9 Medium chain dehy 99.9 2.1E-23 4.6E-28 162.7 21.2 188 2-205 162-350 (350)
46 PTZ00354 alcohol dehydrogenase 99.9 2.7E-23 5.9E-28 161.0 21.5 200 2-207 124-330 (334)
47 TIGR01751 crot-CoA-red crotony 99.9 3.6E-23 7.8E-28 164.0 22.5 195 2-207 171-389 (398)
48 cd08290 ETR 2-enoyl thioester 99.9 2.7E-23 5.8E-28 161.6 21.2 198 2-205 130-341 (341)
49 cd05286 QOR2 Quinone oxidoredu 99.9 5.1E-23 1.1E-27 158.1 21.8 197 2-205 120-320 (320)
50 cd08263 Zn_ADH10 Alcohol dehyd 99.9 4.3E-23 9.4E-28 162.0 21.3 192 2-204 171-367 (367)
51 cd08297 CAD3 Cinnamyl alcohol 99.9 7.7E-23 1.7E-27 159.1 22.4 190 2-205 150-341 (341)
52 cd08240 6_hydroxyhexanoate_dh_ 99.9 7E-23 1.5E-27 159.8 21.9 189 2-204 159-349 (350)
53 cd08243 quinone_oxidoreductase 99.9 7.3E-23 1.6E-27 157.6 21.0 194 2-203 126-319 (320)
54 COG1063 Tdh Threonine dehydrog 99.9 4.3E-23 9.4E-28 160.3 19.7 193 2-205 152-350 (350)
55 TIGR02819 fdhA_non_GSH formald 99.9 1.1E-22 2.3E-27 160.5 20.8 195 2-206 170-391 (393)
56 cd08289 MDR_yhfp_like Yhfp put 99.9 8E-23 1.7E-27 158.0 19.6 196 2-205 127-326 (326)
57 PRK10754 quinone oxidoreductas 99.9 2.3E-22 5E-27 155.5 21.7 197 2-205 124-327 (327)
58 cd05284 arabinose_DH_like D-ar 99.9 2.5E-22 5.5E-27 156.1 21.7 187 2-205 150-340 (340)
59 cd08260 Zn_ADH6 Alcohol dehydr 99.9 2.7E-22 5.8E-27 156.3 21.7 192 2-204 149-344 (345)
60 TIGR02817 adh_fam_1 zinc-bindi 99.9 3E-22 6.6E-27 155.4 21.4 191 2-204 127-334 (336)
61 cd05280 MDR_yhdh_yhfp Yhdh and 99.9 1.9E-22 4E-27 155.8 20.1 195 2-205 127-325 (325)
62 TIGR02823 oxido_YhdH putative 99.9 3.2E-22 6.9E-27 154.5 21.0 194 2-205 126-323 (323)
63 cd08261 Zn_ADH7 Alcohol dehydr 99.9 5.3E-22 1.2E-26 154.1 21.7 189 2-205 144-337 (337)
64 cd08230 glucose_DH Glucose deh 99.9 1.6E-22 3.4E-27 158.1 18.8 173 15-205 169-355 (355)
65 cd08285 NADP_ADH NADP(H)-depen 99.9 4.6E-22 1E-26 155.3 20.7 192 2-205 151-351 (351)
66 cd08276 MDR7 Medium chain dehy 99.9 9.5E-22 2.1E-26 152.4 22.2 191 2-205 144-336 (336)
67 cd08254 hydroxyacyl_CoA_DH 6-h 99.9 7.8E-22 1.7E-26 153.1 21.5 188 2-205 149-338 (338)
68 cd08253 zeta_crystallin Zeta-c 99.9 8.9E-22 1.9E-26 151.6 21.7 196 2-205 128-325 (325)
69 cd08270 MDR4 Medium chain dehy 99.9 8.7E-22 1.9E-26 150.8 20.9 187 2-205 117-305 (305)
70 PRK09422 ethanol-active dehydr 99.9 1.1E-21 2.4E-26 152.4 21.6 189 2-206 147-337 (338)
71 cd08278 benzyl_alcohol_DH Benz 99.9 9.3E-22 2E-26 154.3 21.3 193 2-204 170-365 (365)
72 TIGR01202 bchC 2-desacetyl-2-h 99.9 2.2E-22 4.8E-27 154.3 17.0 174 3-204 131-308 (308)
73 cd08249 enoyl_reductase_like e 99.9 6.7E-22 1.5E-26 153.7 19.4 189 2-205 128-339 (339)
74 cd08251 polyketide_synthase po 99.9 1.1E-21 2.5E-26 149.7 20.1 194 2-203 105-303 (303)
75 cd08237 ribitol-5-phosphate_DH 99.9 5.6E-22 1.2E-26 154.1 18.6 179 2-206 145-340 (341)
76 cd08266 Zn_ADH_like1 Alcohol d 99.9 2.7E-21 5.9E-26 150.0 22.2 192 2-205 150-342 (342)
77 cd08283 FDH_like_1 Glutathione 99.9 1.7E-21 3.6E-26 153.9 21.1 191 2-205 169-386 (386)
78 cd05278 FDH_like Formaldehyde 99.9 1.1E-21 2.4E-26 152.9 19.7 190 2-205 152-347 (347)
79 cd08235 iditol_2_DH_like L-idi 99.9 2.1E-21 4.5E-26 151.1 20.9 189 2-204 150-343 (343)
80 cd08256 Zn_ADH2 Alcohol dehydr 99.9 1.6E-21 3.5E-26 152.2 20.1 186 2-203 159-350 (350)
81 PRK13771 putative alcohol dehy 99.9 1.6E-21 3.5E-26 151.2 19.8 187 2-205 147-333 (334)
82 cd08269 Zn_ADH9 Alcohol dehydr 99.9 3.6E-21 7.8E-26 147.8 21.4 192 2-203 114-311 (312)
83 TIGR02824 quinone_pig3 putativ 99.9 3.5E-21 7.7E-26 148.3 21.4 197 2-205 123-325 (325)
84 cd08286 FDH_like_ADH2 formalde 99.9 4.4E-21 9.5E-26 149.5 21.5 189 2-205 150-345 (345)
85 cd05276 p53_inducible_oxidored 99.9 3.9E-21 8.4E-26 147.8 20.9 195 2-203 123-323 (323)
86 cd08236 sugar_DH NAD(P)-depend 99.9 4.3E-21 9.2E-26 149.4 21.3 194 2-203 144-343 (343)
87 cd05285 sorbitol_DH Sorbitol d 99.9 3.7E-21 8E-26 149.8 20.7 186 2-203 147-341 (343)
88 PRK10083 putative oxidoreducta 99.9 5.3E-21 1.1E-25 148.7 21.3 189 2-207 145-339 (339)
89 cd08265 Zn_ADH3 Alcohol dehydr 99.9 4.2E-21 9.1E-26 151.5 21.0 189 2-203 186-383 (384)
90 cd08284 FDH_like_2 Glutathione 99.9 4.7E-21 1E-25 149.2 21.0 187 2-204 152-343 (344)
91 TIGR03366 HpnZ_proposed putati 99.9 1.2E-21 2.7E-26 148.3 17.2 169 2-185 105-280 (280)
92 cd05283 CAD1 Cinnamyl alcohol 99.9 2.9E-21 6.4E-26 150.0 19.6 183 2-204 154-337 (337)
93 cd08262 Zn_ADH8 Alcohol dehydr 99.9 6.1E-21 1.3E-25 148.4 21.1 188 2-204 146-341 (341)
94 cd05195 enoyl_red enoyl reduct 99.9 4.5E-21 9.8E-26 145.4 19.9 195 2-203 92-293 (293)
95 cd08252 AL_MDR Arginate lyase 99.9 7E-21 1.5E-25 147.7 21.4 192 2-204 128-336 (336)
96 cd08279 Zn_ADH_class_III Class 99.9 7.5E-21 1.6E-25 149.1 21.5 192 2-202 166-362 (363)
97 cd08241 QOR1 Quinone oxidoredu 99.9 8.2E-21 1.8E-25 146.1 21.2 196 2-204 123-323 (323)
98 cd08287 FDH_like_ADH3 formalde 99.9 7.5E-21 1.6E-25 148.1 20.9 187 2-204 153-344 (345)
99 cd08268 MDR2 Medium chain dehy 99.9 1.2E-20 2.5E-25 145.6 21.8 197 2-205 128-328 (328)
100 smart00829 PKS_ER Enoylreducta 99.9 6.2E-21 1.3E-25 144.4 19.4 195 2-203 88-288 (288)
101 cd08288 MDR_yhdh Yhdh putative 99.9 1.2E-20 2.5E-25 145.8 21.1 194 2-205 127-324 (324)
102 cd08282 PFDH_like Pseudomonas 99.9 1.1E-20 2.3E-25 148.8 21.1 193 2-205 161-375 (375)
103 cd05279 Zn_ADH1 Liver alcohol 99.9 1.6E-20 3.5E-25 147.3 20.9 192 2-203 167-364 (365)
104 cd08259 Zn_ADH5 Alcohol dehydr 99.9 1.9E-20 4.1E-25 145.0 20.9 186 2-204 147-332 (332)
105 PF00107 ADH_zinc_N: Zinc-bind 99.9 4.6E-21 9.9E-26 129.0 14.8 127 30-168 1-129 (130)
106 cd08272 MDR6 Medium chain dehy 99.9 2.8E-20 6E-25 143.5 21.1 191 2-205 128-326 (326)
107 PRK05396 tdh L-threonine 3-deh 99.9 4E-20 8.6E-25 143.9 20.5 188 3-206 150-341 (341)
108 TIGR00692 tdh L-threonine 3-de 99.9 4.3E-20 9.3E-25 143.7 20.6 189 2-205 147-340 (340)
109 cd08299 alcohol_DH_class_I_II_ 99.9 7.9E-20 1.7E-24 143.7 21.5 194 2-205 174-373 (373)
110 cd08232 idonate-5-DH L-idonate 99.9 7E-20 1.5E-24 142.4 20.8 184 2-205 150-339 (339)
111 cd08247 AST1_like AST1 is a cy 99.9 3.3E-20 7.1E-25 145.0 18.9 201 2-205 134-352 (352)
112 cd08271 MDR5 Medium chain dehy 99.9 1.7E-19 3.8E-24 139.1 21.9 192 2-205 125-325 (325)
113 cd08234 threonine_DH_like L-th 99.9 1.6E-19 3.5E-24 140.0 21.3 186 2-203 144-333 (334)
114 cd05281 TDH Threonine dehydrog 99.9 9.5E-20 2.1E-24 141.8 19.9 186 3-205 150-341 (341)
115 cd08273 MDR8 Medium chain dehy 99.9 8E-20 1.7E-24 141.5 19.3 194 2-203 123-330 (331)
116 cd08275 MDR3 Medium chain dehy 99.9 2.3E-19 4.9E-24 139.1 21.9 201 2-205 122-337 (337)
117 cd08242 MDR_like Medium chain 99.9 7.9E-20 1.7E-24 140.9 18.9 175 4-205 142-319 (319)
118 cd08264 Zn_ADH_like2 Alcohol d 99.9 1.5E-19 3.2E-24 139.8 19.3 178 2-201 147-324 (325)
119 PLN02702 L-idonate 5-dehydroge 99.9 5.4E-19 1.2E-23 138.7 22.3 186 3-204 167-363 (364)
120 cd08248 RTN4I1 Human Reticulon 99.8 1.1E-19 2.5E-24 141.7 17.0 198 2-204 142-350 (350)
121 cd05289 MDR_like_2 alcohol deh 99.8 4.5E-19 9.8E-24 135.7 19.3 182 2-203 128-309 (309)
122 cd08245 CAD Cinnamyl alcohol d 99.8 9.1E-19 2E-23 135.6 20.7 183 2-203 147-330 (330)
123 cd08298 CAD2 Cinnamyl alcohol 99.8 6.3E-19 1.4E-23 136.5 19.7 177 2-203 152-329 (329)
124 cd08267 MDR1 Medium chain dehy 99.8 1.5E-18 3.3E-23 133.5 19.2 188 2-203 127-319 (319)
125 cd08255 2-desacetyl-2-hydroxye 99.8 1.4E-18 3E-23 131.5 17.1 185 2-203 82-277 (277)
126 cd08258 Zn_ADH4 Alcohol dehydr 99.8 1.3E-17 2.9E-22 127.9 19.2 155 2-170 148-306 (306)
127 cd05188 MDR Medium chain reduc 99.8 1.1E-16 2.4E-21 120.3 18.0 141 2-151 118-260 (271)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 2.6E-18 5.7E-23 115.1 6.2 122 63-203 1-127 (127)
129 cd00401 AdoHcyase S-adenosyl-L 99.6 4.5E-14 9.7E-19 110.8 15.1 176 5-206 187-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.6 2.5E-13 5.4E-18 109.2 16.2 149 16-174 162-334 (509)
131 TIGR00561 pntA NAD(P) transhyd 99.0 1.1E-08 2.3E-13 82.6 11.2 107 17-125 162-291 (511)
132 COG4221 Short-chain alcohol de 98.8 2.6E-08 5.7E-13 72.1 8.6 80 18-97 5-90 (246)
133 PRK11873 arsM arsenite S-adeno 98.8 1.7E-07 3.6E-12 70.9 11.6 171 13-203 72-259 (272)
134 PRK05476 S-adenosyl-L-homocyst 98.8 2.3E-07 5E-12 73.6 12.2 103 5-121 197-302 (425)
135 TIGR00518 alaDH alanine dehydr 98.7 8.9E-07 1.9E-11 69.7 14.5 100 19-124 167-273 (370)
136 TIGR00936 ahcY adenosylhomocys 98.7 6.6E-07 1.4E-11 70.6 12.7 102 6-121 181-285 (406)
137 PLN02494 adenosylhomocysteinas 98.7 5.9E-07 1.3E-11 71.7 12.2 101 6-120 240-343 (477)
138 COG3967 DltE Short-chain dehyd 98.6 4.4E-07 9.6E-12 63.9 8.2 79 18-97 4-87 (245)
139 PRK05786 fabG 3-ketoacyl-(acyl 98.6 1.1E-06 2.3E-11 65.0 10.6 104 18-121 4-138 (238)
140 PRK08306 dipicolinate synthase 98.6 3.8E-06 8.3E-11 64.1 13.6 94 18-122 151-245 (296)
141 COG0300 DltE Short-chain dehyd 98.6 5.8E-07 1.3E-11 66.7 8.8 81 16-97 3-93 (265)
142 PRK08324 short chain dehydroge 98.5 1.4E-06 3E-11 74.2 11.2 105 18-122 421-561 (681)
143 PRK05993 short chain dehydroge 98.5 4.9E-06 1.1E-10 63.1 12.5 79 18-97 3-85 (277)
144 PRK12742 oxidoreductase; Provi 98.5 4E-06 8.8E-11 61.9 11.7 102 18-121 5-134 (237)
145 PRK06182 short chain dehydroge 98.5 3.8E-06 8.3E-11 63.5 11.4 79 18-97 2-83 (273)
146 PRK05693 short chain dehydroge 98.5 4.3E-06 9.3E-11 63.2 11.6 77 20-97 2-81 (274)
147 PRK08265 short chain dehydroge 98.4 5.4E-06 1.2E-10 62.3 11.6 104 18-121 5-139 (261)
148 KOG1205 Predicted dehydrogenas 98.4 1.2E-05 2.6E-10 60.3 11.7 106 18-123 11-154 (282)
149 PRK08339 short chain dehydroge 98.3 1.6E-05 3.5E-10 59.8 11.9 105 18-122 7-147 (263)
150 PRK07109 short chain dehydroge 98.3 1.3E-05 2.9E-10 62.4 11.6 105 18-122 7-147 (334)
151 PRK05872 short chain dehydroge 98.3 4.9E-06 1.1E-10 63.7 8.9 81 18-98 8-95 (296)
152 PF01488 Shikimate_DH: Shikima 98.3 6.2E-06 1.3E-10 55.6 8.1 95 17-120 10-111 (135)
153 PRK06500 short chain dehydroge 98.3 2.4E-05 5.2E-10 58.1 11.5 80 18-97 5-89 (249)
154 PRK12771 putative glutamate sy 98.3 4.8E-06 1E-10 69.4 8.5 97 15-117 133-252 (564)
155 PRK06484 short chain dehydroge 98.3 1.7E-05 3.8E-10 65.4 11.7 106 17-122 267-404 (520)
156 PRK06057 short chain dehydroge 98.3 9.5E-06 2.1E-10 60.7 9.3 80 18-97 6-88 (255)
157 PRK06200 2,3-dihydroxy-2,3-dih 98.2 9.5E-06 2.1E-10 61.0 8.9 80 18-97 5-89 (263)
158 PRK12829 short chain dehydroge 98.2 2E-05 4.3E-10 59.1 10.7 83 15-97 7-95 (264)
159 PRK08261 fabG 3-ketoacyl-(acyl 98.2 2.8E-05 6.1E-10 63.1 12.1 80 18-97 209-293 (450)
160 TIGR02853 spore_dpaA dipicolin 98.2 6E-05 1.3E-09 57.3 12.9 93 18-121 150-243 (287)
161 PRK06139 short chain dehydroge 98.2 1.2E-05 2.5E-10 62.6 9.2 80 18-97 6-93 (330)
162 PRK07825 short chain dehydroge 98.2 1E-05 2.3E-10 61.1 8.8 79 19-97 5-87 (273)
163 PTZ00075 Adenosylhomocysteinas 98.2 1.9E-05 4.2E-10 63.3 10.1 91 16-120 251-343 (476)
164 TIGR03325 BphB_TodD cis-2,3-di 98.2 1.3E-05 2.9E-10 60.1 8.9 80 18-97 4-88 (262)
165 PRK07806 short chain dehydroge 98.2 4E-05 8.6E-10 57.0 11.3 103 18-120 5-136 (248)
166 PRK07326 short chain dehydroge 98.2 3E-05 6.6E-10 57.2 10.4 80 18-97 5-91 (237)
167 cd05213 NAD_bind_Glutamyl_tRNA 98.2 4.9E-05 1.1E-09 58.6 11.6 89 3-101 159-251 (311)
168 PRK07060 short chain dehydroge 98.2 2.5E-05 5.5E-10 57.9 9.8 78 18-97 8-86 (245)
169 PRK06484 short chain dehydroge 98.2 3.4E-05 7.5E-10 63.7 11.5 80 18-97 4-88 (520)
170 PRK12939 short chain dehydroge 98.2 3.3E-05 7.2E-10 57.4 10.3 81 18-98 6-94 (250)
171 PF13460 NAD_binding_10: NADH( 98.1 0.0001 2.2E-09 52.1 12.3 93 22-121 1-100 (183)
172 PRK08267 short chain dehydroge 98.1 6.8E-05 1.5E-09 56.2 11.7 78 20-97 2-86 (260)
173 PRK07576 short chain dehydroge 98.1 1.3E-05 2.9E-10 60.3 7.7 80 18-97 8-95 (264)
174 PRK06196 oxidoreductase; Provi 98.1 2.3E-05 4.9E-10 60.6 9.1 80 18-97 25-108 (315)
175 PRK12828 short chain dehydroge 98.1 6.6E-05 1.4E-09 55.3 11.1 80 18-97 6-91 (239)
176 PRK07062 short chain dehydroge 98.1 2E-05 4.4E-10 59.2 8.4 80 18-97 7-96 (265)
177 PF12847 Methyltransf_18: Meth 98.1 2.3E-05 4.9E-10 50.8 7.6 95 18-117 1-110 (112)
178 PRK10538 malonic semialdehyde 98.1 8.2E-05 1.8E-09 55.4 11.4 77 21-97 2-83 (248)
179 PRK07063 short chain dehydroge 98.1 2E-05 4.2E-10 59.1 8.1 80 18-97 6-95 (260)
180 PRK08017 oxidoreductase; Provi 98.1 4.2E-05 9.1E-10 57.1 9.8 77 20-97 3-83 (256)
181 PRK05866 short chain dehydroge 98.1 2E-05 4.2E-10 60.3 8.1 80 18-97 39-126 (293)
182 PRK07832 short chain dehydroge 98.1 7.5E-05 1.6E-09 56.4 11.1 77 21-97 2-87 (272)
183 PLN03209 translocon at the inn 98.1 0.00012 2.6E-09 60.3 12.7 103 14-121 75-210 (576)
184 PRK05854 short chain dehydroge 98.1 3.6E-05 7.9E-10 59.4 9.4 80 18-97 13-102 (313)
185 PRK05867 short chain dehydroge 98.1 2.3E-05 4.9E-10 58.6 7.9 80 18-97 8-95 (253)
186 KOG1209 1-Acyl dihydroxyaceton 98.1 0.00011 2.3E-09 52.5 10.6 106 18-123 6-143 (289)
187 PRK09072 short chain dehydroge 98.1 0.00011 2.3E-09 55.3 11.5 81 18-98 4-90 (263)
188 PLN02780 ketoreductase/ oxidor 98.1 4.5E-05 9.8E-10 59.1 9.7 80 18-97 52-141 (320)
189 PRK07478 short chain dehydroge 98.1 3.4E-05 7.4E-10 57.6 8.8 80 18-97 5-92 (254)
190 PF02826 2-Hacid_dh_C: D-isome 98.1 6E-05 1.3E-09 53.3 9.5 89 17-119 34-128 (178)
191 PRK08177 short chain dehydroge 98.1 3.4E-05 7.3E-10 56.6 8.5 77 20-97 2-80 (225)
192 PRK06180 short chain dehydroge 98.0 3.6E-05 7.8E-10 58.3 8.7 81 18-98 3-88 (277)
193 PRK12823 benD 1,6-dihydroxycyc 98.0 0.00012 2.7E-09 54.7 11.5 80 18-97 7-93 (260)
194 PRK12429 3-hydroxybutyrate deh 98.0 0.00011 2.3E-09 54.9 11.2 80 18-97 3-90 (258)
195 PRK07231 fabG 3-ketoacyl-(acyl 98.0 3E-05 6.6E-10 57.6 8.1 81 18-98 4-91 (251)
196 PRK06914 short chain dehydroge 98.0 8.6E-05 1.9E-09 56.3 10.6 79 18-97 2-90 (280)
197 PRK07814 short chain dehydroge 98.0 4.1E-05 9E-10 57.5 8.8 80 18-97 9-96 (263)
198 PRK06949 short chain dehydroge 98.0 3.5E-05 7.7E-10 57.6 8.3 81 17-97 7-95 (258)
199 PRK09186 flagellin modificatio 98.0 3.8E-05 8.1E-10 57.4 8.3 80 18-97 3-92 (256)
200 PRK07831 short chain dehydroge 98.0 5.1E-05 1.1E-09 57.0 9.0 82 16-97 14-106 (262)
201 PRK00045 hemA glutamyl-tRNA re 98.0 5E-05 1.1E-09 61.1 9.3 88 2-99 162-253 (423)
202 PRK07890 short chain dehydroge 98.0 3.4E-05 7.4E-10 57.7 7.9 81 17-97 3-91 (258)
203 PRK07533 enoyl-(acyl carrier p 98.0 0.00014 3.1E-09 54.5 11.2 104 18-121 9-151 (258)
204 PRK06128 oxidoreductase; Provi 98.0 0.0001 2.3E-09 56.5 10.7 104 18-122 54-195 (300)
205 PRK05717 oxidoreductase; Valid 98.0 5E-05 1.1E-09 56.8 8.7 80 18-97 9-93 (255)
206 PRK07453 protochlorophyllide o 98.0 5.2E-05 1.1E-09 58.8 9.0 80 18-97 5-92 (322)
207 COG2518 Pcm Protein-L-isoaspar 98.0 0.00011 2.4E-09 52.5 9.6 99 12-119 66-170 (209)
208 PRK06841 short chain dehydroge 98.0 5.3E-05 1.1E-09 56.6 8.5 79 18-97 14-98 (255)
209 PRK05876 short chain dehydroge 98.0 4.1E-05 8.9E-10 58.0 7.9 80 18-97 5-92 (275)
210 PRK07523 gluconate 5-dehydroge 98.0 5.4E-05 1.2E-09 56.6 8.4 80 18-97 9-96 (255)
211 PLN02253 xanthoxin dehydrogena 98.0 6.9E-05 1.5E-09 56.8 9.0 80 18-97 17-103 (280)
212 PRK00377 cbiT cobalt-precorrin 98.0 0.00028 6.1E-09 50.8 11.6 100 12-116 34-143 (198)
213 PRK08217 fabG 3-ketoacyl-(acyl 98.0 7.3E-05 1.6E-09 55.6 8.9 80 18-97 4-91 (253)
214 PRK07904 short chain dehydroge 98.0 8.9E-05 1.9E-09 55.5 9.3 83 15-97 4-96 (253)
215 COG0686 Ald Alanine dehydrogen 98.0 0.00018 4E-09 54.2 10.6 101 16-123 166-273 (371)
216 PRK05884 short chain dehydroge 98.0 9.4E-05 2E-09 54.3 9.2 76 21-97 2-78 (223)
217 PF02353 CMAS: Mycolic acid cy 98.0 4E-05 8.7E-10 57.8 7.3 102 10-119 54-167 (273)
218 PRK07677 short chain dehydroge 98.0 5E-05 1.1E-09 56.7 7.9 79 19-97 1-87 (252)
219 PRK07024 short chain dehydroge 97.9 9.4E-05 2E-09 55.4 9.2 79 19-97 2-87 (257)
220 PRK06194 hypothetical protein; 97.9 5.5E-05 1.2E-09 57.5 8.1 81 18-98 5-93 (287)
221 KOG1014 17 beta-hydroxysteroid 97.9 8.5E-05 1.8E-09 55.9 8.7 80 17-97 47-135 (312)
222 PRK06197 short chain dehydroge 97.9 8.4E-05 1.8E-09 57.2 9.1 80 18-97 15-104 (306)
223 PRK06953 short chain dehydroge 97.9 0.00012 2.5E-09 53.6 9.4 77 20-97 2-79 (222)
224 PRK06398 aldose dehydrogenase; 97.9 5.5E-05 1.2E-09 56.7 7.8 75 18-97 5-81 (258)
225 PRK07067 sorbitol dehydrogenas 97.9 8.6E-05 1.9E-09 55.6 8.8 80 18-97 5-89 (257)
226 PRK11705 cyclopropane fatty ac 97.9 0.00019 4.1E-09 56.9 11.0 104 7-119 156-268 (383)
227 TIGR01832 kduD 2-deoxy-D-gluco 97.9 7.9E-05 1.7E-09 55.4 8.6 79 18-97 4-89 (248)
228 PRK08340 glucose-1-dehydrogena 97.9 6.2E-05 1.3E-09 56.4 8.0 77 21-97 2-85 (259)
229 PRK06483 dihydromonapterin red 97.9 9.3E-05 2E-09 54.6 8.8 78 19-97 2-83 (236)
230 PRK08594 enoyl-(acyl carrier p 97.9 0.00023 4.9E-09 53.4 10.9 105 18-122 6-151 (257)
231 PRK06101 short chain dehydroge 97.9 0.00051 1.1E-08 50.9 12.7 77 20-97 2-80 (240)
232 PRK09291 short chain dehydroge 97.9 0.00015 3.2E-09 54.2 9.9 75 19-97 2-82 (257)
233 PRK08589 short chain dehydroge 97.9 7.3E-05 1.6E-09 56.5 8.2 79 18-97 5-91 (272)
234 PRK09242 tropinone reductase; 97.9 7.1E-05 1.5E-09 56.0 8.1 81 18-98 8-98 (257)
235 PRK06482 short chain dehydroge 97.9 9.9E-05 2.2E-09 55.8 8.9 78 20-97 3-85 (276)
236 PRK08415 enoyl-(acyl carrier p 97.9 9.3E-05 2E-09 56.1 8.7 105 18-122 4-147 (274)
237 PRK07774 short chain dehydroge 97.9 8.2E-05 1.8E-09 55.3 8.3 80 18-97 5-92 (250)
238 PRK08643 acetoin reductase; Va 97.9 6.4E-05 1.4E-09 56.2 7.7 79 19-97 2-88 (256)
239 cd01078 NAD_bind_H4MPT_DH NADP 97.9 0.00026 5.7E-09 50.8 10.6 77 18-99 27-108 (194)
240 PRK08213 gluconate 5-dehydroge 97.9 9.3E-05 2E-09 55.4 8.4 80 18-97 11-98 (259)
241 PRK08085 gluconate 5-dehydroge 97.9 9.1E-05 2E-09 55.3 8.2 80 18-97 8-95 (254)
242 PRK08862 short chain dehydroge 97.9 0.00011 2.4E-09 54.1 8.4 80 18-97 4-92 (227)
243 PRK06138 short chain dehydroge 97.9 0.00012 2.6E-09 54.5 8.6 80 18-97 4-90 (252)
244 PRK08251 short chain dehydroge 97.9 0.00011 2.3E-09 54.7 8.3 79 19-97 2-90 (248)
245 PRK06505 enoyl-(acyl carrier p 97.9 0.00011 2.3E-09 55.7 8.3 80 18-97 6-94 (271)
246 PRK06079 enoyl-(acyl carrier p 97.9 9.2E-05 2E-09 55.3 7.9 104 18-122 6-147 (252)
247 PRK08263 short chain dehydroge 97.9 0.00014 2.9E-09 55.1 8.9 79 19-97 3-86 (275)
248 PRK06179 short chain dehydroge 97.9 5.7E-05 1.2E-09 56.9 6.8 78 18-98 3-83 (270)
249 PRK06181 short chain dehydroge 97.9 0.0001 2.2E-09 55.3 8.1 79 19-97 1-87 (263)
250 PRK12481 2-deoxy-D-gluconate 3 97.8 0.00013 2.8E-09 54.5 8.5 79 18-97 7-92 (251)
251 PRK07035 short chain dehydroge 97.8 0.00011 2.3E-09 54.8 8.1 80 18-97 7-94 (252)
252 PRK05875 short chain dehydroge 97.8 0.00014 3.1E-09 55.0 8.9 80 18-97 6-95 (276)
253 PRK12937 short chain dehydroge 97.8 0.00034 7.4E-09 51.8 10.7 104 18-121 4-142 (245)
254 PRK07454 short chain dehydroge 97.8 0.00013 2.9E-09 54.0 8.5 81 17-97 4-92 (241)
255 PRK07985 oxidoreductase; Provi 97.8 0.00023 5.1E-09 54.5 10.0 105 18-122 48-189 (294)
256 PRK06720 hypothetical protein; 97.8 0.00021 4.6E-09 50.0 8.9 80 18-97 15-102 (169)
257 PRK06172 short chain dehydroge 97.8 9.8E-05 2.1E-09 55.1 7.7 80 18-97 6-93 (253)
258 PRK08277 D-mannonate oxidoredu 97.8 0.00015 3.2E-09 55.0 8.7 80 18-97 9-96 (278)
259 PRK08703 short chain dehydroge 97.8 0.00022 4.8E-09 52.7 9.5 80 18-97 5-96 (239)
260 PRK08261 fabG 3-ketoacyl-(acyl 97.8 4.9E-05 1.1E-09 61.7 6.4 93 14-121 29-126 (450)
261 PRK04148 hypothetical protein; 97.8 0.00029 6.3E-09 46.9 8.8 51 15-68 13-63 (134)
262 PRK07666 fabG 3-ketoacyl-(acyl 97.8 0.00011 2.4E-09 54.3 7.7 80 18-97 6-93 (239)
263 PRK06125 short chain dehydroge 97.8 0.00022 4.7E-09 53.5 9.2 78 18-97 6-90 (259)
264 KOG1201 Hydroxysteroid 17-beta 97.8 0.00011 2.5E-09 55.1 7.4 78 18-97 37-123 (300)
265 PRK13394 3-hydroxybutyrate deh 97.8 0.00012 2.5E-09 54.9 7.7 80 18-97 6-93 (262)
266 PRK07074 short chain dehydroge 97.8 0.0002 4.4E-09 53.5 8.9 79 19-97 2-86 (257)
267 TIGR01289 LPOR light-dependent 97.8 0.00018 3.9E-09 55.6 8.8 79 19-97 3-90 (314)
268 KOG1210 Predicted 3-ketosphing 97.8 0.00019 4.2E-09 54.1 8.5 84 15-98 29-122 (331)
269 COG4122 Predicted O-methyltran 97.8 0.00087 1.9E-08 48.6 11.6 103 12-117 53-165 (219)
270 PRK05653 fabG 3-ketoacyl-(acyl 97.8 0.00021 4.6E-09 52.8 8.9 81 18-98 4-92 (246)
271 PRK06603 enoyl-(acyl carrier p 97.8 0.0002 4.3E-09 53.8 8.7 80 18-97 7-95 (260)
272 PRK12747 short chain dehydroge 97.8 0.00044 9.5E-09 51.6 10.5 105 18-122 3-148 (252)
273 PRK06114 short chain dehydroge 97.8 0.00019 4.1E-09 53.7 8.4 80 18-97 7-95 (254)
274 PRK08159 enoyl-(acyl carrier p 97.8 0.00019 4.1E-09 54.3 8.4 106 16-121 7-151 (272)
275 PRK12936 3-ketoacyl-(acyl-carr 97.8 0.00023 5E-09 52.7 8.8 80 18-97 5-89 (245)
276 PRK06198 short chain dehydroge 97.8 0.00016 3.5E-09 54.1 8.0 82 17-98 4-94 (260)
277 PRK07791 short chain dehydroge 97.8 0.00019 4.1E-09 54.7 8.4 81 17-97 4-101 (286)
278 COG2230 Cfa Cyclopropane fatty 97.8 0.00039 8.4E-09 52.3 9.7 108 6-121 60-179 (283)
279 PRK08628 short chain dehydroge 97.8 0.00018 3.9E-09 53.8 8.2 80 18-97 6-92 (258)
280 PRK06124 gluconate 5-dehydroge 97.8 0.00025 5.4E-09 53.0 8.9 80 18-97 10-97 (256)
281 CHL00194 ycf39 Ycf39; Provisio 97.8 0.00038 8.2E-09 53.9 10.1 94 21-120 2-111 (317)
282 PRK06701 short chain dehydroge 97.8 0.00056 1.2E-08 52.3 10.9 105 18-122 45-185 (290)
283 PF00106 adh_short: short chai 97.8 7.9E-05 1.7E-09 51.8 5.8 78 20-97 1-89 (167)
284 PRK07856 short chain dehydroge 97.7 0.00017 3.7E-09 53.8 7.7 75 18-97 5-84 (252)
285 PRK06463 fabG 3-ketoacyl-(acyl 97.7 0.00027 5.8E-09 52.8 8.7 79 18-97 6-88 (255)
286 PRK07097 gluconate 5-dehydroge 97.7 0.00029 6.3E-09 53.0 9.0 80 18-97 9-96 (265)
287 PLN02730 enoyl-[acyl-carrier-p 97.7 0.00049 1.1E-08 52.9 10.2 38 18-56 8-47 (303)
288 PRK07889 enoyl-(acyl carrier p 97.7 0.0002 4.3E-09 53.7 7.9 80 18-97 6-94 (256)
289 PRK12367 short chain dehydroge 97.7 0.00047 1E-08 51.4 9.8 73 18-97 13-88 (245)
290 PRK06935 2-deoxy-D-gluconate 3 97.7 0.00016 3.5E-09 54.1 7.4 79 18-97 14-100 (258)
291 PRK05565 fabG 3-ketoacyl-(acyl 97.7 0.00046 9.9E-09 51.1 9.8 79 19-97 5-92 (247)
292 PRK08416 7-alpha-hydroxysteroi 97.7 0.00028 6E-09 52.9 8.6 80 18-97 7-96 (260)
293 PRK12746 short chain dehydroge 97.7 0.00063 1.4E-08 50.7 10.5 80 18-97 5-99 (254)
294 PRK06113 7-alpha-hydroxysteroi 97.7 0.0002 4.4E-09 53.5 7.7 80 18-97 10-97 (255)
295 PRK06077 fabG 3-ketoacyl-(acyl 97.7 0.001 2.2E-08 49.5 11.4 104 18-122 5-144 (252)
296 COG1748 LYS9 Saccharopine dehy 97.7 0.00055 1.2E-08 53.9 10.1 95 20-121 2-102 (389)
297 PRK12938 acetyacetyl-CoA reduc 97.7 0.00042 9.2E-09 51.4 9.2 81 18-98 2-91 (246)
298 PRK08690 enoyl-(acyl carrier p 97.7 0.00025 5.5E-09 53.3 8.0 80 18-97 5-93 (261)
299 TIGR03206 benzo_BadH 2-hydroxy 97.7 0.00023 5.1E-09 52.8 7.7 80 18-97 2-89 (250)
300 PRK08226 short chain dehydroge 97.7 0.00031 6.7E-09 52.7 8.4 80 18-97 5-91 (263)
301 PRK12743 oxidoreductase; Provi 97.7 0.00032 6.9E-09 52.5 8.4 79 19-97 2-89 (256)
302 PRK12384 sorbitol-6-phosphate 97.7 0.00023 5E-09 53.3 7.6 79 19-97 2-90 (259)
303 PRK07984 enoyl-(acyl carrier p 97.7 0.00036 7.8E-09 52.5 8.6 80 18-97 5-93 (262)
304 PRK13943 protein-L-isoaspartat 97.7 0.0012 2.7E-08 51.0 11.5 100 12-117 74-179 (322)
305 PRK08303 short chain dehydroge 97.7 0.00037 8.1E-09 53.7 8.7 80 18-97 7-105 (305)
306 PF00670 AdoHcyase_NAD: S-aden 97.7 0.0013 2.9E-08 45.3 10.3 100 6-119 9-111 (162)
307 PRK08945 putative oxoacyl-(acy 97.7 0.00034 7.5E-09 52.0 8.2 82 16-97 9-101 (247)
308 PRK06997 enoyl-(acyl carrier p 97.7 0.00028 6.1E-09 53.0 7.7 80 18-97 5-93 (260)
309 PRK13940 glutamyl-tRNA reducta 97.6 0.00067 1.4E-08 54.3 10.0 74 17-99 179-253 (414)
310 PRK12826 3-ketoacyl-(acyl-carr 97.6 0.00038 8.3E-09 51.7 8.3 80 18-97 5-92 (251)
311 KOG0725 Reductases with broad 97.6 0.00028 6.1E-09 53.3 7.5 81 17-97 6-98 (270)
312 TIGR01035 hemA glutamyl-tRNA r 97.6 0.00074 1.6E-08 54.3 10.3 75 15-99 176-251 (417)
313 PRK13942 protein-L-isoaspartat 97.6 0.0018 3.9E-08 47.1 11.4 102 10-117 68-175 (212)
314 PRK06940 short chain dehydroge 97.6 0.0017 3.7E-08 49.2 11.7 101 19-121 2-128 (275)
315 PRK07775 short chain dehydroge 97.6 0.00061 1.3E-08 51.6 9.1 80 18-97 9-96 (274)
316 PRK07424 bifunctional sterol d 97.6 0.00079 1.7E-08 53.8 10.0 75 18-97 177-254 (406)
317 PRK08220 2,3-dihydroxybenzoate 97.6 0.0012 2.6E-08 49.1 10.6 75 18-98 7-86 (252)
318 PRK08278 short chain dehydroge 97.6 0.00047 1E-08 52.1 8.4 79 18-97 5-99 (273)
319 COG2242 CobL Precorrin-6B meth 97.6 0.0018 3.9E-08 45.5 10.5 100 14-119 30-136 (187)
320 PRK05650 short chain dehydroge 97.6 0.00039 8.5E-09 52.4 7.9 77 21-97 2-86 (270)
321 COG2226 UbiE Methylase involve 97.6 0.0011 2.3E-08 48.9 9.8 103 13-121 46-159 (238)
322 TIGR01963 PHB_DH 3-hydroxybuty 97.6 0.00033 7.2E-09 52.2 7.4 79 19-97 1-87 (255)
323 PRK08993 2-deoxy-D-gluconate 3 97.6 0.00048 1E-08 51.4 8.2 79 18-97 9-94 (253)
324 PRK07577 short chain dehydroge 97.6 0.00032 6.8E-09 51.6 7.2 74 18-97 2-77 (234)
325 PF01135 PCMT: Protein-L-isoas 97.6 0.00053 1.2E-08 49.7 7.9 103 10-119 64-173 (209)
326 PRK05599 hypothetical protein; 97.6 0.00044 9.6E-09 51.5 7.8 76 21-97 2-86 (246)
327 PLN02476 O-methyltransferase 97.6 0.0021 4.6E-08 48.5 11.3 103 11-116 111-226 (278)
328 PRK07370 enoyl-(acyl carrier p 97.6 0.00041 8.9E-09 52.0 7.6 105 18-122 5-151 (258)
329 PLN00015 protochlorophyllide r 97.6 0.00049 1.1E-08 53.1 8.0 75 23-97 1-84 (308)
330 PRK05855 short chain dehydroge 97.5 0.00037 8.1E-09 58.2 7.8 80 18-97 314-401 (582)
331 PLN00141 Tic62-NAD(P)-related 97.5 0.00091 2E-08 49.9 9.1 101 18-121 16-134 (251)
332 PRK00258 aroE shikimate 5-dehy 97.5 0.0011 2.4E-08 50.4 9.6 93 17-117 121-220 (278)
333 PRK09135 pteridine reductase; 97.5 0.00057 1.2E-08 50.7 8.0 80 18-97 5-94 (249)
334 PRK13944 protein-L-isoaspartat 97.5 0.0016 3.4E-08 47.2 10.0 103 10-117 64-172 (205)
335 PRK08063 enoyl-(acyl carrier p 97.5 0.00046 1E-08 51.3 7.5 80 18-97 3-91 (250)
336 PRK09134 short chain dehydroge 97.5 0.00083 1.8E-08 50.3 8.9 80 18-97 8-96 (258)
337 PRK07201 short chain dehydroge 97.5 0.00063 1.4E-08 58.0 9.2 80 18-97 370-457 (657)
338 TIGR02632 RhaD_aldol-ADH rhamn 97.5 0.00039 8.5E-09 59.3 7.8 80 18-97 413-502 (676)
339 PRK08642 fabG 3-ketoacyl-(acyl 97.5 0.00069 1.5E-08 50.4 8.4 80 18-97 4-90 (253)
340 KOG1200 Mitochondrial/plastidi 97.5 0.00086 1.9E-08 47.4 8.1 79 19-97 14-99 (256)
341 TIGR01829 AcAcCoA_reduct aceto 97.5 0.00056 1.2E-08 50.5 7.8 78 20-97 1-87 (242)
342 PF01262 AlaDh_PNT_C: Alanine 97.5 0.0006 1.3E-08 47.7 7.4 101 19-122 20-143 (168)
343 KOG1208 Dehydrogenases with di 97.5 0.00065 1.4E-08 52.3 8.1 104 18-121 34-173 (314)
344 PRK07069 short chain dehydroge 97.5 0.00062 1.3E-08 50.6 7.8 76 22-97 2-88 (251)
345 PRK08264 short chain dehydroge 97.5 0.00077 1.7E-08 49.7 8.3 75 18-98 5-83 (238)
346 PRK06523 short chain dehydroge 97.5 0.00026 5.7E-09 53.0 5.8 76 18-97 8-86 (260)
347 PLN02781 Probable caffeoyl-CoA 97.5 0.003 6.5E-08 46.7 11.2 102 12-116 62-176 (234)
348 PRK07102 short chain dehydroge 97.5 0.001 2.2E-08 49.3 8.7 77 20-97 2-85 (243)
349 TIGR00438 rrmJ cell division p 97.5 0.0029 6.2E-08 45.1 10.7 98 13-118 27-146 (188)
350 TIGR02415 23BDH acetoin reduct 97.5 0.00063 1.4E-08 50.7 7.6 77 21-97 2-86 (254)
351 PRK05557 fabG 3-ketoacyl-(acyl 97.5 0.0011 2.3E-08 49.1 8.7 80 18-97 4-92 (248)
352 PRK08936 glucose-1-dehydrogena 97.5 0.00084 1.8E-08 50.3 8.0 80 18-97 6-94 (261)
353 TIGR00406 prmA ribosomal prote 97.5 0.00057 1.2E-08 52.2 7.1 97 16-120 157-261 (288)
354 PLN02589 caffeoyl-CoA O-methyl 97.5 0.0041 8.8E-08 46.3 11.3 102 12-116 73-188 (247)
355 TIGR00080 pimt protein-L-isoas 97.4 0.0038 8.2E-08 45.6 11.1 102 10-117 69-176 (215)
356 COG1052 LdhA Lactate dehydroge 97.4 0.0062 1.3E-07 47.2 12.4 90 17-121 144-239 (324)
357 PF01596 Methyltransf_3: O-met 97.4 0.00071 1.5E-08 48.9 6.8 102 13-117 40-154 (205)
358 PRK06171 sorbitol-6-phosphate 97.4 0.00031 6.8E-09 52.8 5.1 76 18-97 8-86 (266)
359 PRK08309 short chain dehydroge 97.4 0.023 4.9E-07 40.2 14.9 89 21-110 2-97 (177)
360 PF13561 adh_short_C2: Enoyl-( 97.4 0.0041 8.9E-08 46.1 11.0 97 26-122 1-137 (241)
361 PF02670 DXP_reductoisom: 1-de 97.4 0.0066 1.4E-07 40.3 10.3 92 22-116 1-119 (129)
362 PRK12745 3-ketoacyl-(acyl-carr 97.4 0.0016 3.4E-08 48.6 8.5 78 20-97 3-89 (256)
363 PRK00107 gidB 16S rRNA methylt 97.4 0.0043 9.4E-08 44.2 10.2 98 15-119 42-146 (187)
364 PRK00517 prmA ribosomal protei 97.4 0.005 1.1E-07 46.1 11.1 91 16-120 117-215 (250)
365 COG0169 AroE Shikimate 5-dehyd 97.4 0.0022 4.8E-08 48.6 9.0 70 17-97 124-199 (283)
366 PF03435 Saccharop_dh: Sacchar 97.3 0.0022 4.7E-08 51.1 9.5 90 22-117 1-97 (386)
367 PRK03369 murD UDP-N-acetylmura 97.3 0.0013 2.8E-08 54.1 8.4 73 15-98 8-80 (488)
368 COG2519 GCD14 tRNA(1-methylade 97.3 0.0056 1.2E-07 45.1 10.6 102 12-119 88-196 (256)
369 PRK08219 short chain dehydroge 97.3 0.004 8.6E-08 45.5 10.1 76 20-98 4-81 (227)
370 PRK07578 short chain dehydroge 97.3 0.0037 8.1E-08 44.8 9.7 87 21-121 2-114 (199)
371 PRK12549 shikimate 5-dehydroge 97.3 0.0056 1.2E-07 46.7 10.9 72 17-97 125-201 (284)
372 TIGR02469 CbiT precorrin-6Y C5 97.3 0.0093 2E-07 39.0 10.8 99 12-117 13-121 (124)
373 TIGR02685 pter_reduc_Leis pter 97.3 0.0025 5.4E-08 48.0 9.0 78 20-97 2-93 (267)
374 PF05368 NmrA: NmrA-like famil 97.3 0.0021 4.6E-08 47.3 8.4 70 22-97 1-73 (233)
375 cd01065 NAD_bind_Shikimate_DH 97.3 0.0042 9.2E-08 42.7 9.4 94 17-119 17-117 (155)
376 PRK12935 acetoacetyl-CoA reduc 97.3 0.002 4.3E-08 47.8 8.2 81 18-98 5-94 (247)
377 PRK12548 shikimate 5-dehydroge 97.3 0.0028 6E-08 48.5 9.0 46 17-63 124-173 (289)
378 TIGR00507 aroE shikimate 5-deh 97.3 0.0058 1.3E-07 46.3 10.7 101 8-119 106-215 (270)
379 PRK00811 spermidine synthase; 97.3 0.0045 9.7E-08 47.2 10.1 98 17-118 75-191 (283)
380 PRK13243 glyoxylate reductase; 97.3 0.0097 2.1E-07 46.5 12.0 89 18-121 149-243 (333)
381 TIGR02622 CDP_4_6_dhtase CDP-g 97.3 0.0033 7.2E-08 49.3 9.6 76 18-97 3-84 (349)
382 PRK05447 1-deoxy-D-xylulose 5- 97.3 0.0082 1.8E-07 47.3 11.5 95 20-116 2-120 (385)
383 PRK06947 glucose-1-dehydrogena 97.3 0.0018 4E-08 48.0 7.8 78 20-97 3-89 (248)
384 PLN02657 3,8-divinyl protochlo 97.3 0.0041 8.9E-08 49.7 10.1 104 17-121 58-184 (390)
385 PF08704 GCD14: tRNA methyltra 97.3 0.0025 5.5E-08 47.3 8.3 107 10-119 32-147 (247)
386 TIGR03649 ergot_EASG ergot alk 97.2 0.0022 4.9E-08 48.7 8.3 95 21-119 1-105 (285)
387 PRK07792 fabG 3-ketoacyl-(acyl 97.2 0.0018 3.9E-08 49.9 7.8 80 18-97 11-98 (306)
388 PF02719 Polysacc_synt_2: Poly 97.2 0.0062 1.3E-07 46.2 10.4 77 22-99 1-88 (293)
389 PRK12550 shikimate 5-dehydroge 97.2 0.0054 1.2E-07 46.4 10.1 76 7-97 111-187 (272)
390 PRK12825 fabG 3-ketoacyl-(acyl 97.2 0.0023 5.1E-08 47.2 8.2 80 18-97 5-93 (249)
391 KOG1502 Flavonol reductase/cin 97.2 0.0027 5.8E-08 48.8 8.4 74 18-97 5-87 (327)
392 PLN02366 spermidine synthase 97.2 0.0054 1.2E-07 47.2 10.2 100 16-118 89-206 (308)
393 COG2910 Putative NADH-flavin r 97.2 0.0072 1.6E-07 42.4 9.7 92 21-121 2-107 (211)
394 PF03807 F420_oxidored: NADP o 97.2 0.014 3.1E-07 36.5 10.6 86 21-117 1-93 (96)
395 PRK12744 short chain dehydroge 97.2 0.0029 6.2E-08 47.3 8.5 81 18-98 7-99 (257)
396 PLN03075 nicotianamine synthas 97.2 0.0057 1.2E-07 46.6 9.9 97 18-118 123-233 (296)
397 PRK14027 quinate/shikimate deh 97.2 0.007 1.5E-07 46.1 10.5 46 17-63 125-171 (283)
398 PRK07041 short chain dehydroge 97.2 0.0025 5.5E-08 46.7 8.0 73 23-97 1-78 (230)
399 PRK06123 short chain dehydroge 97.2 0.0035 7.7E-08 46.5 8.8 79 19-97 2-89 (248)
400 PRK09730 putative NAD(P)-bindi 97.2 0.0026 5.6E-08 47.1 8.0 79 20-98 2-89 (247)
401 TIGR01809 Shik-DH-AROM shikima 97.2 0.0024 5.2E-08 48.6 7.7 75 18-98 124-200 (282)
402 TIGR03589 PseB UDP-N-acetylglu 97.2 0.0036 7.8E-08 48.7 8.8 75 18-97 3-83 (324)
403 PLN02896 cinnamyl-alcohol dehy 97.2 0.0067 1.4E-07 47.7 10.4 78 15-97 6-88 (353)
404 PRK13656 trans-2-enoyl-CoA red 97.2 0.0035 7.5E-08 49.4 8.5 81 17-99 39-142 (398)
405 PTZ00098 phosphoethanolamine N 97.2 0.0062 1.3E-07 45.9 9.7 107 8-119 42-157 (263)
406 KOG1207 Diacetyl reductase/L-x 97.1 0.004 8.6E-08 43.3 7.6 76 18-97 6-86 (245)
407 TIGR01500 sepiapter_red sepiap 97.1 0.0034 7.3E-08 47.0 8.1 43 21-63 2-48 (256)
408 PLN02989 cinnamyl-alcohol dehy 97.1 0.0026 5.7E-08 49.3 7.8 39 18-56 4-42 (325)
409 PLN03139 formate dehydrogenase 97.1 0.019 4E-07 45.7 12.4 91 18-121 198-294 (386)
410 PRK12827 short chain dehydroge 97.1 0.0026 5.7E-08 47.1 7.5 80 18-97 5-96 (249)
411 PRK12748 3-ketoacyl-(acyl-carr 97.1 0.0024 5.3E-08 47.7 7.3 35 18-52 4-40 (256)
412 KOG1610 Corticosteroid 11-beta 97.1 0.026 5.6E-07 43.0 12.4 107 17-123 27-169 (322)
413 PRK07023 short chain dehydroge 97.1 0.004 8.7E-08 46.1 8.3 75 21-97 3-86 (243)
414 PRK11207 tellurite resistance 97.1 0.0029 6.2E-08 45.5 7.2 100 12-119 24-135 (197)
415 PRK12824 acetoacetyl-CoA reduc 97.1 0.004 8.6E-08 46.0 8.2 78 20-97 3-89 (245)
416 PRK12859 3-ketoacyl-(acyl-carr 97.1 0.0041 8.8E-08 46.5 8.2 79 18-97 5-105 (256)
417 PLN02244 tocopherol O-methyltr 97.1 0.0077 1.7E-07 47.2 10.0 98 17-119 117-224 (340)
418 PRK07402 precorrin-6B methylas 97.1 0.025 5.3E-07 40.6 11.9 104 11-119 33-143 (196)
419 PRK06718 precorrin-2 dehydroge 97.1 0.0038 8.3E-08 45.1 7.7 92 18-119 9-101 (202)
420 TIGR01470 cysG_Nterm siroheme 97.1 0.0076 1.6E-07 43.6 9.2 92 18-119 8-101 (205)
421 PF11017 DUF2855: Protein of u 97.1 0.013 2.8E-07 45.0 10.5 97 17-122 134-235 (314)
422 PF01370 Epimerase: NAD depend 97.0 0.0036 7.8E-08 46.0 7.4 74 22-98 1-75 (236)
423 PLN02986 cinnamyl-alcohol dehy 97.0 0.0052 1.1E-07 47.6 8.4 40 18-57 4-43 (322)
424 PLN00016 RNA-binding protein; 97.0 0.012 2.6E-07 46.8 10.5 95 19-120 52-166 (378)
425 PRK08618 ornithine cyclodeamin 97.0 0.0091 2E-07 46.5 9.6 94 17-121 125-224 (325)
426 PRK08655 prephenate dehydrogen 97.0 0.013 2.9E-07 47.4 10.8 88 21-119 2-93 (437)
427 PRK07574 formate dehydrogenase 97.0 0.0081 1.8E-07 47.7 9.3 90 18-120 191-286 (385)
428 COG1028 FabG Dehydrogenases wi 97.0 0.0054 1.2E-07 45.6 8.1 80 18-97 4-95 (251)
429 TIGR03840 TMPT_Se_Te thiopurin 97.0 0.033 7.2E-07 40.6 11.8 101 17-120 33-154 (213)
430 PRK06719 precorrin-2 dehydroge 97.0 0.029 6.2E-07 38.8 10.9 88 18-117 12-99 (157)
431 PRK07502 cyclohexadienyl dehyd 97.0 0.016 3.5E-07 44.7 10.7 89 20-119 7-101 (307)
432 PRK01581 speE spermidine synth 97.0 0.023 5.1E-07 44.5 11.4 99 16-119 148-269 (374)
433 KOG4169 15-hydroxyprostaglandi 97.0 0.0026 5.6E-08 46.1 5.7 103 19-122 5-140 (261)
434 PRK11036 putative S-adenosyl-L 97.0 0.03 6.5E-07 42.0 11.8 96 17-117 43-148 (255)
435 PRK14982 acyl-ACP reductase; P 97.0 0.011 2.3E-07 46.1 9.4 94 17-121 153-249 (340)
436 PRK06924 short chain dehydroge 96.9 0.0072 1.6E-07 44.9 8.4 41 20-60 2-43 (251)
437 PLN02686 cinnamoyl-CoA reducta 96.9 0.0066 1.4E-07 48.1 8.6 44 17-60 51-94 (367)
438 PRK04457 spermidine synthase; 96.9 0.026 5.6E-07 42.5 11.3 96 17-116 65-175 (262)
439 PRK08317 hypothetical protein; 96.9 0.014 3.1E-07 42.9 9.9 104 11-119 12-125 (241)
440 COG2227 UbiG 2-polyprenyl-3-me 96.9 0.013 2.9E-07 42.9 9.2 93 18-117 59-160 (243)
441 PRK14967 putative methyltransf 96.9 0.02 4.4E-07 42.0 10.4 96 14-119 32-160 (223)
442 TIGR01830 3oxo_ACP_reduc 3-oxo 96.9 0.0051 1.1E-07 45.2 7.3 77 22-98 1-86 (239)
443 PF13659 Methyltransf_26: Meth 96.9 0.011 2.4E-07 38.4 8.2 96 19-117 1-114 (117)
444 PLN02653 GDP-mannose 4,6-dehyd 96.9 0.0035 7.6E-08 49.0 6.7 37 18-54 5-41 (340)
445 COG0373 HemA Glutamyl-tRNA red 96.9 0.034 7.3E-07 44.4 12.0 94 17-120 176-276 (414)
446 KOG1199 Short-chain alcohol de 96.9 0.0058 1.3E-07 42.3 6.8 83 15-98 5-93 (260)
447 PLN00203 glutamyl-tRNA reducta 96.9 0.013 2.8E-07 48.4 9.9 72 18-98 265-339 (519)
448 PRK00312 pcm protein-L-isoaspa 96.9 0.011 2.4E-07 43.0 8.6 101 12-119 72-176 (212)
449 PRK12749 quinate/shikimate deh 96.9 0.016 3.4E-07 44.3 9.6 77 18-97 123-205 (288)
450 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.024 5.2E-07 39.6 9.7 78 17-121 42-119 (168)
451 PF13241 NAD_binding_7: Putati 96.8 0.0024 5.3E-08 40.8 4.4 88 18-121 6-94 (103)
452 PLN02928 oxidoreductase family 96.8 0.012 2.7E-07 46.1 9.1 96 17-120 157-264 (347)
453 PF10727 Rossmann-like: Rossma 96.8 0.0057 1.2E-07 40.6 6.2 81 19-111 10-91 (127)
454 TIGR01831 fabG_rel 3-oxoacyl-( 96.8 0.0066 1.4E-07 44.8 7.3 76 22-97 1-85 (239)
455 TIGR00715 precor6x_red precorr 96.8 0.0047 1E-07 46.2 6.4 73 21-98 2-75 (256)
456 TIGR01472 gmd GDP-mannose 4,6- 96.8 0.0067 1.5E-07 47.5 7.6 35 20-54 1-35 (343)
457 PRK06849 hypothetical protein; 96.8 0.017 3.7E-07 46.1 10.0 95 18-114 3-103 (389)
458 PF08659 KR: KR domain; Inter 96.8 0.011 2.4E-07 41.9 7.9 76 21-97 2-90 (181)
459 PLN02214 cinnamoyl-CoA reducta 96.8 0.015 3.3E-07 45.5 9.4 39 17-55 8-46 (342)
460 cd05311 NAD_bind_2_malic_enz N 96.8 0.045 9.7E-07 40.3 11.2 90 17-118 23-128 (226)
461 PRK06300 enoyl-(acyl carrier p 96.8 0.033 7.2E-07 42.8 10.9 34 18-51 7-42 (299)
462 PLN02662 cinnamyl-alcohol dehy 96.8 0.007 1.5E-07 46.8 7.4 38 18-55 3-40 (322)
463 PRK15469 ghrA bifunctional gly 96.8 0.014 3.1E-07 45.1 8.9 88 18-120 135-228 (312)
464 TIGR03466 HpnA hopanoid-associ 96.7 0.0036 7.8E-08 48.4 5.6 71 21-97 2-73 (328)
465 PRK08125 bifunctional UDP-gluc 96.7 0.011 2.3E-07 50.7 8.6 78 15-97 311-391 (660)
466 PRK08410 2-hydroxyacid dehydro 96.7 0.013 2.8E-07 45.3 8.4 85 18-120 144-234 (311)
467 COG1090 Predicted nucleoside-d 96.7 0.003 6.6E-08 47.1 4.6 67 22-99 1-67 (297)
468 PRK06550 fabG 3-ketoacyl-(acyl 96.7 0.0043 9.3E-08 45.6 5.4 37 18-54 4-40 (235)
469 PLN02650 dihydroflavonol-4-red 96.7 0.016 3.4E-07 45.5 8.7 42 18-59 4-45 (351)
470 PF02254 TrkA_N: TrkA-N domain 96.7 0.086 1.9E-06 34.2 11.5 93 22-119 1-97 (116)
471 PRK13255 thiopurine S-methyltr 96.6 0.014 3E-07 42.7 7.7 99 15-117 34-154 (218)
472 PRK07340 ornithine cyclodeamin 96.6 0.025 5.4E-07 43.6 9.4 93 17-121 123-220 (304)
473 PRK01683 trans-aconitate 2-met 96.6 0.059 1.3E-06 40.4 11.2 97 12-117 25-129 (258)
474 PLN02427 UDP-apiose/xylose syn 96.6 0.014 2.9E-07 46.6 8.2 76 16-97 11-95 (386)
475 PF01209 Ubie_methyltran: ubiE 96.6 0.0018 3.8E-08 47.9 2.9 102 12-121 41-156 (233)
476 TIGR00563 rsmB ribosomal RNA s 96.6 0.056 1.2E-06 43.8 11.6 104 12-119 232-369 (426)
477 PF01113 DapB_N: Dihydrodipico 96.6 0.028 6E-07 37.2 8.2 92 21-121 2-100 (124)
478 cd01075 NAD_bind_Leu_Phe_Val_D 96.6 0.029 6.2E-07 40.5 8.9 81 17-109 26-107 (200)
479 PLN02240 UDP-glucose 4-epimera 96.6 0.02 4.4E-07 44.9 8.8 34 19-52 5-38 (352)
480 PRK14903 16S rRNA methyltransf 96.5 0.12 2.5E-06 42.0 13.0 104 12-120 231-368 (431)
481 PRK15409 bifunctional glyoxyla 96.5 0.026 5.7E-07 43.9 8.9 88 18-120 144-238 (323)
482 COG0111 SerA Phosphoglycerate 96.5 0.052 1.1E-06 42.2 10.5 87 18-119 141-234 (324)
483 PRK12480 D-lactate dehydrogena 96.5 0.053 1.2E-06 42.3 10.6 86 18-120 145-236 (330)
484 TIGR00477 tehB tellurite resis 96.5 0.018 3.9E-07 41.3 7.5 102 8-118 20-133 (195)
485 PLN00198 anthocyanidin reducta 96.5 0.018 3.8E-07 45.0 8.0 38 18-55 8-45 (338)
486 PLN02233 ubiquinone biosynthes 96.5 0.07 1.5E-06 40.2 10.8 102 13-120 68-184 (261)
487 PRK13403 ketol-acid reductoiso 96.5 0.065 1.4E-06 41.4 10.5 87 16-116 13-104 (335)
488 PRK14192 bifunctional 5,10-met 96.5 0.047 1E-06 41.6 9.8 79 16-121 156-234 (283)
489 COG0623 FabI Enoyl-[acyl-carri 96.5 0.15 3.3E-06 37.3 11.6 106 16-121 3-147 (259)
490 PRK08287 cobalt-precorrin-6Y C 96.5 0.18 3.9E-06 35.8 12.4 98 12-117 25-130 (187)
491 PLN02695 GDP-D-mannose-3',5'-e 96.5 0.011 2.4E-07 46.8 6.7 37 17-53 19-55 (370)
492 PRK10258 biotin biosynthesis p 96.5 0.24 5.2E-06 37.0 15.6 96 15-119 39-141 (251)
493 TIGR01777 yfcH conserved hypot 96.4 0.0031 6.7E-08 48.0 3.4 66 22-97 1-66 (292)
494 TIGR02752 MenG_heptapren 2-hep 96.4 0.03 6.6E-07 41.2 8.5 100 12-119 39-152 (231)
495 TIGR02197 heptose_epim ADP-L-g 96.4 0.012 2.7E-07 45.2 6.6 73 22-97 1-75 (314)
496 PRK14103 trans-aconitate 2-met 96.4 0.085 1.8E-06 39.6 10.9 95 12-117 23-125 (255)
497 PF08241 Methyltransf_11: Meth 96.4 0.0038 8.2E-08 38.7 3.1 82 29-116 5-95 (95)
498 smart00822 PKS_KR This enzymat 96.4 0.017 3.7E-07 40.0 6.8 76 21-97 2-90 (180)
499 COG1179 Dinucleotide-utilizing 96.4 0.082 1.8E-06 38.9 10.1 103 18-122 29-157 (263)
500 PLN02520 bifunctional 3-dehydr 96.4 0.032 6.9E-07 46.4 9.2 71 18-97 378-448 (529)
No 1
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=5.6e-34 Score=207.20 Aligned_cols=206 Identities=52% Similarity=0.898 Sum_probs=187.4
Q ss_pred CchhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 1 ~~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++.|||.+|.++++.++|++|+|-+|+|++|..+.|+||..|++|+.++.++++++++++++|.|.++||+.. ++.++
T Consensus 133 mpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~ 211 (340)
T COG2130 133 MPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQA 211 (340)
T ss_pred CchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999967999999999998 99999
Q ss_pred HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-CCCccchHHHhhcceeEEEeec-cccccchHH
Q 028523 81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-PEGVHNLTCLISKRIRMEGFLV-PDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 158 (208)
+++..+.|+|+.||++|++.++..+..|+.++|+..+|..+.++... +........++.+.+++.|+.. ..+.....+
T Consensus 212 L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e 291 (340)
T COG2130 212 LKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPE 291 (340)
T ss_pred HHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHH
Confidence 99999999999999999999999999999999999999999887542 3333445566677899999998 445666679
Q ss_pred HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523 159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 207 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 207 (208)
.++++..++.+|+|+...+.+-.||++++||.-+-+|+..||.|+++.+
T Consensus 292 ~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 292 ALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 9999999999999999887777899999999999999999999999864
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.8e-33 Score=213.83 Aligned_cols=198 Identities=32% Similarity=0.490 Sum_probs=169.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||++|....++++|++|||+||+|+||.+++|+||++|+++++++.++++.++++ ++|++++++|++. ++.+++
T Consensus 126 ~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v 203 (326)
T COG0604 126 AGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQV 203 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHH
Confidence 57899999999999999999999999999999999999999987777777888888888 9999999999988 899999
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF 159 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (208)
++++++ ++|+|+|++|++.+..++.+|+++|+++.+|..++ ......+...++.+.+...+...... ++...+.
T Consensus 204 ~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 279 (326)
T COG0604 204 RELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEA 279 (326)
T ss_pred HHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHH
Confidence 999998 89999999999999999999999999999999773 12233445667777888887776543 3445678
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhc-CCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFS-GRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv~~ 205 (208)
+.++.+++++|.+++.++.+||+++..++..+... ++..||+|+++
T Consensus 280 ~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 280 LAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 89999999999999999999999996555544444 48899999974
No 3
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.7e-33 Score=216.46 Aligned_cols=207 Identities=75% Similarity=1.219 Sum_probs=173.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++|++.++++++.+++.+.+
T Consensus 142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i 221 (348)
T PLN03154 142 AGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAAL 221 (348)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHH
Confidence 67899999988889999999999999999999999999999999999999999999886469999999987532677778
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
++.+++++|++||++|+..+..++++++++|+++.+|...+..........+...++.+++++.|+....+.....+.++
T Consensus 222 ~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~ 301 (348)
T PLN03154 222 KRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLE 301 (348)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHH
Confidence 77776689999999998899999999999999999997653211100011244567778899998876544333356788
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 208 (208)
++++++++|++++.++.+++|+++++|++.+++++..||+||++.+|
T Consensus 302 ~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 302 NVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred HHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 99999999999998888899999999999999999999999999765
No 4
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.6e-33 Score=198.18 Aligned_cols=200 Identities=24% Similarity=0.348 Sum_probs=174.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
.++|||..+++...+++|++||++.|.|++|++++|+++..|++++.++.+.++.+.++ +.|+.+.|+|+.. |+.+++
T Consensus 130 q~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V 207 (336)
T KOG1197|consen 130 QGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEV 207 (336)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999 9999999999998 999999
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccchH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYP 157 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 157 (208)
++++++ |+|+++|.+|.+.+...+.+|++.|.++.+|..++. ..+.++..+-.+++.+....+..+ +....
T Consensus 208 ~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~ 282 (336)
T KOG1197|consen 208 KKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGL-----IDPIPLNQLSPKALQLVRPSLLGYIDGEVELV 282 (336)
T ss_pred HhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCC-----CCCeehhhcChhhhhhccHhhhcccCCHHHHH
Confidence 999987 999999999999999999999999999999998763 223334444455665554444333 33344
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 208 (208)
....++..++.+|.+++.+.++|||+++.+|+..+++....||+++.+.+|
T Consensus 283 ~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 283 SYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred HHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 567778889999999999999999999999999999999999999988764
No 5
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=192.87 Aligned_cols=208 Identities=77% Similarity=1.289 Sum_probs=193.6
Q ss_pred CchhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 1 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 1 ~~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
++++|||..+.+++..++|++|+|-||+|++|+.+.|+|+.+|++|+.++.|+++...+++++|.+..+||.++.+..++
T Consensus 136 m~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~a 215 (343)
T KOG1196|consen 136 MPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAA 215 (343)
T ss_pred CchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999989999999999987789999
Q ss_pred HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
+++..+.|+|+-||.+|+..++..+..|+..||++.+|..+.++.+.+..-.+....+.+++++.|+....+.+.+.+.+
T Consensus 216 L~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~l 295 (343)
T KOG1196|consen 216 LKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFL 295 (343)
T ss_pred HHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHH
Confidence 99988889999999999999999999999999999999999888777766667788889999999988888888888999
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecCC
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVATE 208 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 208 (208)
+.+..++.+|+|+-.-+..-.|++.+.|+.-|.+|+..||.++.+..|
T Consensus 296 d~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 296 DFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred HHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence 999999999999988776678999999999999999999999998754
No 6
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=4.4e-31 Score=198.80 Aligned_cols=188 Identities=28% Similarity=0.387 Sum_probs=168.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|.|++|.+ .++++|++|+|+|+ |++|++++|+|+++|++|+++++++++.+.++ ++|++++++.++. +..+.+
T Consensus 151 aGiT~y~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~~-~~~~~~ 226 (339)
T COG1064 151 AGITTYRALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS-DALEAV 226 (339)
T ss_pred CeeeEeeehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCCc-hhhHHh
Confidence 57799999955 89999999999997 79999999999999999999999999999999 9999999998754 676666
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
++. +|+++|+++...++..++.|+++|+++++|.+.. .+....+...++.+++++.|+...+ +..++
T Consensus 227 ~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~-----~~d~~ 293 (339)
T COG1064 227 KEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT-----RADLE 293 (339)
T ss_pred Hhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC-----HHHHH
Confidence 653 9999999997799999999999999999999741 1233456777889999999999987 77799
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
+++++..+|.++|.+.++++++++++|++.|.+++..||.||.+.
T Consensus 294 e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 294 EALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 999999999999999888999999999999999999999999875
No 7
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.97 E-value=5.9e-30 Score=198.71 Aligned_cols=204 Identities=76% Similarity=1.245 Sum_probs=166.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++.+|++.++++.+.+++.+.+
T Consensus 135 ~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i 214 (338)
T cd08295 135 PGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAAL 214 (338)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHH
Confidence 56899999988889999999999999999999999999999999999999999999998339999999976432677777
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
++.+++++|++||++|+..+..++++++++|+++.+|...+..........+....+.+++++.++.....+....+.++
T Consensus 215 ~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 294 (338)
T cd08295 215 KRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLE 294 (338)
T ss_pred HHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHH
Confidence 77765689999999999899999999999999999987543211000011223455667778877665444333456788
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
++++++.+|.+++.+..+|+++++.+|++.+++++..||+|+++
T Consensus 295 ~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 295 EMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 89999999999988777899999999999999999899999874
No 8
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.97 E-value=6.2e-30 Score=197.83 Aligned_cols=202 Identities=49% Similarity=0.878 Sum_probs=168.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++.+++
T Consensus 127 ~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v 204 (329)
T cd08294 127 PGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEAL 204 (329)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHH
Confidence 57899999988899999999999999999999999999999999999999999999999 8999999999876 888888
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCC-CccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPE-GVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
++.+++++|++||++|++.+..++++++++|+++.+|.....+..... ..........+++++.++....+.....+.+
T Consensus 205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 284 (329)
T cd08294 205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEAL 284 (329)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHH
Confidence 877766899999999999999999999999999999864322111010 1122345566788888766544323345678
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+++++++++|.+++.+..+++++++.+|++.+.+++..||+|+++
T Consensus 285 ~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 285 KQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 889999999999987667899999999999999999899999874
No 9
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.97 E-value=6.5e-30 Score=197.50 Aligned_cols=202 Identities=48% Similarity=0.812 Sum_probs=164.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.+.+++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++.+.+.+.+
T Consensus 122 ~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~ 200 (325)
T TIGR02825 122 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETL 200 (325)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHH
Confidence 57899999988899999999999999999999999999999999999999999999998 89999999988642566666
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCC-CCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF 159 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (208)
+...++++|++||++|++.+..++++++++|+++.+|...+...... .........+.+++++.++....+ .....+.
T Consensus 201 ~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (325)
T TIGR02825 201 KKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA 280 (325)
T ss_pred HHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence 66665589999999998888999999999999999987543211001 111123345567778777765433 2233567
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
++++++++.+|.+++.+..+++++++.+|++.+++++..||+|+.
T Consensus 281 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 281 LKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 889999999999998877889999999999999999989999973
No 10
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=1.2e-29 Score=194.75 Aligned_cols=202 Identities=27% Similarity=0.389 Sum_probs=159.1
Q ss_pred chhhHHHHHHHhc------CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523 2 PGMTAYAGFFEVC------SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP 75 (208)
Q Consensus 2 ~~~tA~~~l~~~~------~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 75 (208)
+++|||.+|...+ ++++|++|||+||+|++|++++|+|++.++..+++++|+++.+.++ ++|++.++||++.
T Consensus 135 ~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~- 212 (347)
T KOG1198|consen 135 AALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE- 212 (347)
T ss_pred HHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-
Confidence 5789999999999 9999999999999999999999999999975555555999999999 9999999999997
Q ss_pred cHHHHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---
Q 028523 76 DLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--- 152 (208)
Q Consensus 76 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 152 (208)
++.+.+++.+.++||+||||+|+........++..+|+...++...+...+.+.. ..+...........+.....+
T Consensus 213 ~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
T KOG1198|consen 213 NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGLKGVNYRWL 291 (347)
T ss_pred HHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc-cchhhhhhhhheeeeeeccceeee
Confidence 9999999988459999999999988888889999888755555544322221111 001101111111111111111
Q ss_pred -ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 153 -FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 153 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
.....+.++.+.+++++|+++|.+.+.||++++.+|++.+.++...||+++++.
T Consensus 292 ~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 292 YFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred eecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 344478899999999999999999999999999999999999999999999875
No 11
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.97 E-value=2.2e-28 Score=190.40 Aligned_cols=203 Identities=41% Similarity=0.702 Sum_probs=159.6
Q ss_pred chhhHHHHHHHhcCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523 2 PGMTAYAGFFEVCSPKQG--EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD 78 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g--~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 78 (208)
+++|||+++.+.+++++| ++|||+|++|++|++++|+|+++|+ +|+++++++++.+.+++++|++.++++++. ++.
T Consensus 136 ~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~ 214 (345)
T cd08293 136 PGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVA 214 (345)
T ss_pred HHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHH
Confidence 578999999888888877 9999999999999999999999999 899999999999998845999999999876 888
Q ss_pred HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCC-Cccc--hHH-HhhcceeEEEeecccccc
Q 028523 79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPE-GVHN--LTC-LISKRIRMEGFLVPDYFH 154 (208)
Q Consensus 79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~ 154 (208)
+.+++.+++++|++||++|++.+..++++|+++|+++.+|........... .... ... .+.+++++..+.....+.
T Consensus 215 ~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (345)
T cd08293 215 ERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKD 294 (345)
T ss_pred HHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHh
Confidence 888887766899999999988889999999999999999864321100000 0111 011 123445544443323333
Q ss_pred chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
...+.++++.+++.+|.+++.+..+++++++.+|++.+.+++..||+|+++
T Consensus 295 ~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 295 KFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 335668889999999999987666779999999999999999899999875
No 12
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.96 E-value=1.6e-27 Score=187.20 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=163.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++.+.+++++|++|+|+|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++.+. ++.++
T Consensus 175 ~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~ 251 (371)
T cd08281 175 AVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-ELGATATVNAGDP-NAVEQ 251 (371)
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-HcCCceEeCCCch-hHHHH
Confidence 46789999888889999999999985 9999999999999999 7999999999999998 9999999998876 78888
Q ss_pred HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
+++.+++++|++|||+|. ..+..++++++++|+++.+|...+. ....++...++.+++++.|+....+.. .+.
T Consensus 252 i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~ 325 (371)
T cd08281 252 VRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPALSLVAEERTLKGSYMGSCVP--RRD 325 (371)
T ss_pred HHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHHHHhhcCCEEEEEecCCCCh--HHH
Confidence 888776689999999995 6889999999999999999875421 122345566788999999987655421 456
Q ss_pred HHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 160 LEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
++++++++.+|++++ .++++|+++++++|++.+.+++..+|+|+
T Consensus 326 ~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 326 IPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 788999999999975 47889999999999999999998888764
No 13
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.96 E-value=1.1e-26 Score=179.37 Aligned_cols=194 Identities=24% Similarity=0.339 Sum_probs=159.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEe-cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVS-AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~-ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||.++ ..+.+ .++.++|+ ||+|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 128 ~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~ 203 (324)
T cd08291 128 NPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLED 203 (324)
T ss_pred cHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHH
Confidence 467887554 55555 45556665 78999999999999999999999999999999999 8999999998876 88888
Q ss_pred HHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHH
Q 028523 81 LKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (208)
+++.+++ ++|++||++|+......+++++++|+++.+|...+. .....+....+.+++++.++....+ .....+
T Consensus 204 v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (324)
T cd08291 204 LKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGK----LDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPE 279 (324)
T ss_pred HHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCC----CcccCCHHHHhhcCcEEEEEEHHHhhcccCHH
Confidence 8888776 899999999988888899999999999999975431 1112334566788999998887654 222356
Q ss_pred HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.++++++++. |.+++.++++|+++++.+|++.+.+++..||++|.
T Consensus 280 ~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 280 VVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 7888899988 99999999999999999999999999989999873
No 14
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.96 E-value=9.1e-27 Score=181.15 Aligned_cols=186 Identities=22% Similarity=0.240 Sum_probs=153.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++.+ ....+|++|+|+|+ |++|++++|+++.+|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 154 ~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~ 229 (343)
T PRK09880 154 PLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKLVNPQND-DLDHY 229 (343)
T ss_pred HHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEEecCCcc-cHHHH
Confidence 46789999955 45668999999985 9999999999999999 7999999999999999 8999999998875 55432
Q ss_pred HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
. +. .+++|++|||+|+ ..+..++++++++|+++.+|.... ...++....+.+++++.++... .+.
T Consensus 230 ~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~------~~~ 295 (343)
T PRK09880 230 K-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKGSFRF------TEE 295 (343)
T ss_pred h-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEEEeec------ccc
Confidence 2 21 2369999999996 578999999999999999997432 1234556677889998887642 345
Q ss_pred HHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
++++++++++|.+++ .++++|+++++++|++.+.++...||++|.+
T Consensus 296 ~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 296 FNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred HHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 788999999999986 5778999999999999999988789999864
No 15
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.95 E-value=1.6e-26 Score=179.52 Aligned_cols=187 Identities=24% Similarity=0.241 Sum_probs=155.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++. .+.+++|++|+|+|+ |++|++++|+++.+|++ |+++++++++.+.++ ++|++.++++++. + .+.
T Consensus 148 ~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~~-~-~~~ 222 (339)
T cd08239 148 GIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQD-D-VQE 222 (339)
T ss_pred hHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCcc-h-HHH
Confidence 5679999994 577899999999985 99999999999999997 999999999999998 9999999998876 5 666
Q ss_pred HHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+.+++ ++|++|||+|+. .+..++++|+++|+++.+|..... .. .....++.+++++.++.... .+
T Consensus 223 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~-~~~~~~~~~~~~i~g~~~~~-----~~ 291 (339)
T cd08239 223 IRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-----TI-EVSNDLIRKQRTLIGSWYFS-----VP 291 (339)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-----cc-CcHHHHHhCCCEEEEEecCC-----HH
Confidence 7777766 899999999975 558899999999999999975421 11 11245667889998887644 45
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.++++++++.+|.+++ .++++|+++++.+|++.+.++. .||+||++
T Consensus 292 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 292 DMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 6888999999999874 6788999999999999998876 69999874
No 16
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.95 E-value=2.1e-26 Score=180.13 Aligned_cols=193 Identities=18% Similarity=0.241 Sum_probs=160.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 160 ~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~ 236 (358)
T TIGR03451 160 GVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFGATHTVNSSGT-DPVEA 236 (358)
T ss_pred cchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEcCCCc-CHHHH
Confidence 46788988878889999999999985 9999999999999999 5999999999999998 9999999998876 78888
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... .....+...++.+++++.+++..... ..+
T Consensus 237 i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~ 310 (358)
T TIGR03451 237 IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGGALKSSWYGDCL--PER 310 (358)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCCEEEEeecCCCC--cHH
Confidence 8888876 89999999995 6889999999999999999975421 11234455677788888887653221 145
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.++++++++++|.+++ .++++|+++++.+|++.+++++.. |++|.
T Consensus 311 ~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 311 DFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 6888999999999975 478899999999999999988765 77765
No 17
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.95 E-value=6.4e-27 Score=173.50 Aligned_cols=192 Identities=21% Similarity=0.217 Sum_probs=165.1
Q ss_pred hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
.+|.+.+..+.+++++|++|.|+| .|++|++++|-|+..|+ ++++++.+++++++++ +||+++++|.++..++.+.+
T Consensus 170 V~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i 247 (366)
T COG1062 170 VTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAI 247 (366)
T ss_pred eccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH-hcCCceeecchhhhhHHHHH
Confidence 568889888999999999999999 59999999999999999 9999999999999999 99999999998763589999
Q ss_pred HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.+++++|+|++|||+|. ..++.+++++.++|+.+.+|.... ....+.+...+... .++.|+..+... -+..+
T Consensus 248 ~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~i~~~~~~lv~g-r~~~Gs~~G~~~--p~~di 320 (366)
T COG1062 248 VELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQEISTRPFQLVTG-RVWKGSAFGGAR--PRSDI 320 (366)
T ss_pred HHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----CceeecChHHeecc-ceEEEEeecCCc--cccch
Confidence 99999899999999995 799999999999999999998652 23334555555555 788888877642 15568
Q ss_pred HHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 161 EMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 161 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.++++++.+|++.. .++++++|++++|||+.|.+|+.+ |-||.
T Consensus 321 P~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 321 PRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred hHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 99999999999874 578899999999999999999986 44443
No 18
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=2.1e-27 Score=197.26 Aligned_cols=200 Identities=20% Similarity=0.279 Sum_probs=172.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLD 78 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~ 78 (208)
.|.|||++|..++..++|++|||++|+|++|++|+.+|.+.|++|+.|+.|.++++++.+.|.. ..+-|.++. ++.
T Consensus 1536 VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFE 1614 (2376)
T KOG1202|consen 1536 VYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFE 1614 (2376)
T ss_pred EeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHH
Confidence 4789999999999999999999999999999999999999999999999999999999876653 346677776 888
Q ss_pred HHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 79 AALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 79 ~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.-+.+.+.| |+|+|++....+.++..++||+..|||..+|.... ..-+......|.+|.+++|.-+.++.+.-.
T Consensus 1615 q~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDL-----SqNspLGMavfLkNvsfHGiLLDsvmege~ 1689 (2376)
T KOG1202|consen 1615 QHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDL-----SQNSPLGMAVFLKNVSFHGILLDSVMEGEE 1689 (2376)
T ss_pred HHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceec-----ccCCcchhhhhhcccceeeeehhhhhcCcH
Confidence 889998988 99999999999999999999999999999997543 222345678899999999999988855444
Q ss_pred HHHHHHHHHH----HCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523 158 KFLEMMIPRI----KEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 207 (208)
Q Consensus 158 ~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 207 (208)
+.+.++..++ .+|.++|..+++|+-+++++||+.|.+|+.+||+|+++-.
T Consensus 1690 e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1690 EMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred HHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcc
Confidence 5555555555 5568889999999999999999999999999999998854
No 19
>PLN02827 Alcohol dehydrogenase-like
Probab=99.95 E-value=1e-25 Score=177.21 Aligned_cols=195 Identities=19% Similarity=0.225 Sum_probs=158.4
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC-ccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~ 79 (208)
+++|+|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+.++ ++|++.++++++. +++.+
T Consensus 177 ~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~ 254 (378)
T PLN02827 177 GVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK-TFGVTDFINPNDLSEPIQQ 254 (378)
T ss_pred hhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcEEEcccccchHHHH
Confidence 34677887767788999999999985 9999999999999999 5778888999999998 9999999988752 25677
Q ss_pred HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+++.+++++|++||++|. ..+..+++.++++ |+++.+|.... .........++.+++++.|+....+.. .
T Consensus 255 ~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~--~ 327 (378)
T PLN02827 255 VIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-----KPEVSAHYGLFLSGRTLKGSLFGGWKP--K 327 (378)
T ss_pred HHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-----CccccccHHHHhcCceEEeeecCCCch--h
Confidence 7777776689999999996 5789999999998 99999997542 111111235677899999887654321 3
Q ss_pred HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
..+.++++++++|++++ .++++|+++++.+|++.+++++. .|+||.+.
T Consensus 328 ~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 328 SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 45788999999999998 68899999999999999998887 69999874
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.95 E-value=1.1e-25 Score=175.43 Aligned_cols=190 Identities=21% Similarity=0.276 Sum_probs=155.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCC--ccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE--PDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~--~~~~~ 79 (208)
++.|||+++.. ..+++|++|+|+|+ |++|++++|+|+..|++|+++++++++.+.++ ++|++.++++.+. +++.+
T Consensus 151 ~~~ta~~a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~ 227 (349)
T TIGR03201 151 AVTTPYQAAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKK 227 (349)
T ss_pred hHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHH
Confidence 46789999854 78999999999998 99999999999999999999999999999998 8999988887664 14566
Q ss_pred HHHhHCCC-Ccc----EEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccc
Q 028523 80 ALKRYFPE-GIN----IYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYF 153 (208)
Q Consensus 80 ~~~~~~~~-~~d----~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (208)
.+++.+++ ++| ++|||+|+ ..+..++++++++|+++.+|.... ....+...++.++.++.+.+...
T Consensus 228 ~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~~~g~~~~~-- 299 (349)
T TIGR03201 228 LIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNLMAFHARALGNWGCP-- 299 (349)
T ss_pred HHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHHhhcccEEEEEecCC--
Confidence 67777776 776 89999996 567789999999999999998642 12234455666677777766433
Q ss_pred cchHHHHHHHHHHHHCCCceee-eeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 154 HLYPKFLEMMIPRIKEGKIVYV-EDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 154 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.+.++++++++++|.+.+. +.++|+|+++++|++.+.+++..+|+++++
T Consensus 300 ---~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 300 ---PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred ---HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 4568899999999999753 334799999999999999999889999863
No 21
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.95 E-value=7.1e-26 Score=166.34 Aligned_cols=191 Identities=21% Similarity=0.263 Sum_probs=164.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|.|.+| +..++.+|+++.|.|+ |++|.+++|+||++|.+|++++++.++.+.+.+.||++..++..+.+++.+.+
T Consensus 166 aGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~ 243 (360)
T KOG0023|consen 166 AGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAI 243 (360)
T ss_pred cceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHH
Confidence 567899999 5578999999999997 66999999999999999999999986655555489999888887444888888
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
...+++++|-+.+. ....++.++.+|+++|++|++|.+.. ...++..++..+.+++.|+.+++ +...+
T Consensus 244 ~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~GS~vG~-----~ket~ 311 (360)
T KOG0023|consen 244 MKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIKGSIVGS-----RKETQ 311 (360)
T ss_pred HHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEEeecccc-----HHHHH
Confidence 88877777777766 44688999999999999999999762 44566778888999999999988 77789
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 207 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 207 (208)
+++++.++|.+++.+. ..+++++++|+++|+++...+|.||++..
T Consensus 312 E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 312 EALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred HHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 9999999999998886 68999999999999999999999998764
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.95 E-value=1.5e-25 Score=174.67 Aligned_cols=195 Identities=17% Similarity=0.204 Sum_probs=154.9
Q ss_pred hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
.+++|+++ +.+.+++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. + .+.+
T Consensus 146 ~~~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~-~~~~ 220 (347)
T PRK10309 146 ITVGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM-S-APQI 220 (347)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc-C-HHHH
Confidence 34567776 567889999999997 599999999999999996 788888999999988 8999999988765 5 4556
Q ss_pred HhHCCC-Ccc-EEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 82 KRYFPE-GIN-IYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 82 ~~~~~~-~~d-~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|...+. . .........++.+++++.|+..........+
T Consensus 221 ~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 297 (347)
T PRK10309 221 QSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKILRKELTVIGSWMNYSSPWPGQ 297 (347)
T ss_pred HHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHHhhcCcEEEEEeccccCCcchh
Confidence 666665 888 99999996 5889999999999999999976421 0 1111122356678899998765422111245
Q ss_pred HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.++++++++.+|.++ +.++++|+|+++.+|++.+.++...||+|+++
T Consensus 298 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 298 EWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 688899999999985 56889999999999999999998889999976
No 23
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=1.8e-25 Score=164.60 Aligned_cols=192 Identities=22% Similarity=0.248 Sum_probs=160.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc---cH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP---DL 77 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~---~~ 77 (208)
+.+++|||. +++.++.|++|||+|| |++|+.+...||.+|+ +|++++..+.+++.++ +||++.+.+..... .+
T Consensus 154 PLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~~~~~~ 230 (354)
T KOG0024|consen 154 PLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSSHKSSPQEL 230 (354)
T ss_pred chhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeeccccccHHHH
Confidence 467899999 6699999999999997 9999999999999999 9999999999999999 89998877666531 34
Q ss_pred HHHHHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523 78 DAALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL 155 (208)
Q Consensus 78 ~~~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (208)
.+.+....+. .+|+.|||+| ...++.++..++.+|++++.|... ....++......+++.+.|+.-..
T Consensus 231 ~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g~fry~---- 300 (354)
T KOG0024|consen 231 AELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRGSFRYC---- 300 (354)
T ss_pred HHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeeeeeeec----
Confidence 4444544443 6999999999 578999999999999999988755 344566778888999999887532
Q ss_pred hHHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCc-cceEEEEecC
Q 028523 156 YPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRN-VGKQVVEVAT 207 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~~~ 207 (208)
+..++..++++++|++. +.+++.|+++++.+|++.+.++.. .-|+++..++
T Consensus 301 -~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 301 -NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred -cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 45799999999999886 568899999999999999998884 3488887653
No 24
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.94 E-value=1.9e-25 Score=174.70 Aligned_cols=187 Identities=18% Similarity=0.185 Sum_probs=149.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.++++...+.+++|++.++++.+. +.+
T Consensus 167 ~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~----~~~ 241 (360)
T PLN02586 167 AGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP----EKM 241 (360)
T ss_pred chHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH----HHH
Confidence 46789999977677889999999875 9999999999999999998888777665444338999988876642 234
Q ss_pred HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
++.++ ++|++||++|. ..+..++++++++|+++.+|...+ ....+...++.++..+.++.... ...+
T Consensus 242 ~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~ 309 (360)
T PLN02586 242 KAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRKLVGGSDIGG-----IKET 309 (360)
T ss_pred HhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCeEEEEcCcCC-----HHHH
Confidence 44443 69999999996 578999999999999999987532 12344555666777777766543 4568
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
+++++++++|++++.+ ++|+|+++++|++.+.+++..||+|+++.
T Consensus 310 ~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 354 (360)
T PLN02586 310 QEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA 354 (360)
T ss_pred HHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 8999999999999776 47999999999999999998899999863
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.94 E-value=3.8e-25 Score=173.59 Aligned_cols=186 Identities=17% Similarity=0.200 Sum_probs=150.7
Q ss_pred chhhHHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHhcCCCeeEecCCCccHHH
Q 028523 2 PGMTAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNKFGFDEAFNYKEEPDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~~g~~~v~~~~~~~~~~~ 79 (208)
+++|||+++..... .++|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++ ++|++.++++.+. +
T Consensus 161 ~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa~~~i~~~~~----~ 234 (375)
T PLN02178 161 AGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGADSFLVTTDS----Q 234 (375)
T ss_pred cchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCCcEEEcCcCH----H
Confidence 46788999865443 368999999985 999999999999999999998877554 66777 8999998887542 3
Q ss_pred HHHhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 80 ALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
.+.+.++ ++|++|||+|.+ .+..++++++++|+++.+|...+ ....+....+.+++++.|+.... .+
T Consensus 235 ~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~ 302 (375)
T PLN02178 235 KMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGRKMVGGSQIGG-----MK 302 (375)
T ss_pred HHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCCeEEEEeCccC-----HH
Confidence 4444443 699999999965 78999999999999999987532 12345566778899998877654 45
Q ss_pred HHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 159 FLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
.+.++++++++|++++.+ ++|+|+++++|++.+.+++..||+|+++.
T Consensus 303 ~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 303 ETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred HHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 688899999999999877 57999999999999999998899999873
No 26
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.94 E-value=3.7e-25 Score=170.80 Aligned_cols=195 Identities=19% Similarity=0.269 Sum_probs=163.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++ ..+++++|++|+|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|++.++++++. ++...+
T Consensus 124 ~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i 200 (324)
T cd08292 124 MPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKV 200 (324)
T ss_pred cHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHH
Confidence 367889988 4588999999999999999999999999999999999999999999998 7899888888776 788888
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL 155 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 155 (208)
.+.+++ ++|++||++|+.....++++++++|+++.+|...+ ..........+.+++++.++....+ +..
T Consensus 201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (324)
T cd08292 201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEY 275 (324)
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHH
Confidence 888877 89999999998888999999999999999987532 1122334445678999988876543 223
Q ss_pred hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
..+.+..+++++.+|.+++.+.++|+++++.+|++.+.++...+|++++
T Consensus 276 ~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 276 RKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 4567888999999999987677889999999999999988888899874
No 27
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.94 E-value=3.7e-25 Score=172.70 Aligned_cols=187 Identities=21% Similarity=0.257 Sum_probs=159.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++ ..+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 157 ~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~-~~~~~ 232 (351)
T cd08233 157 PLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLDPTEV-DVVAE 232 (351)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCcc-CHHHH
Confidence 467899999 7789999999999985 9999999999999999 8999998999999998 8999999998887 88888
Q ss_pred HHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+++.+++ ++|++||++| ...+..++++|+++|+++.+|.... ....+....+.+++++.+..... .+
T Consensus 233 l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~ 301 (351)
T cd08233 233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSICYT-----RE 301 (351)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEeccC-----cc
Confidence 8888776 7999999998 4688999999999999999997541 12345566778889998876543 45
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcH-HHHHHHHhcCCcc-ceEEE
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESA-PAALVGLFSGRNV-GKQVV 203 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vv 203 (208)
.++++.+++++|.+++ .++++|+++++ ++|++.+.++... +|+||
T Consensus 302 ~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 302 DFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred hHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 6889999999999964 47789999996 7999999999864 89987
No 28
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.94 E-value=4e-25 Score=170.90 Aligned_cols=178 Identities=16% Similarity=0.129 Sum_probs=147.4
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++. .+++++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.++ ++|++.++++.+. .
T Consensus 150 ~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~-~----- 220 (329)
T TIGR02822 150 AGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT-P----- 220 (329)
T ss_pred cchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc-C-----
Confidence 4678999995 588999999999996 99999999999999999999999999999999 9999998875432 1
Q ss_pred HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.+++|.++++.+ ++.+..++++++++|+++.+|...+ ....++....+.+++++.++.... +..+
T Consensus 221 ----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~ 286 (329)
T TIGR02822 221 ----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT-----DTPPLNYQRHLFYERQIRSVTSNT-----RADA 286 (329)
T ss_pred ----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc-----cCCCCCHHHHhhCCcEEEEeecCC-----HHHH
Confidence 125899998887 5789999999999999999997432 111234455667888888776533 4567
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
.++++++.+|++++ ++++|+|+++++|++.+.+++..||+||
T Consensus 287 ~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 287 REFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 88899999999975 5689999999999999999999999987
No 29
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=1.7e-25 Score=163.71 Aligned_cols=193 Identities=20% Similarity=0.233 Sum_probs=164.5
Q ss_pred hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHHH
Q 028523 3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDAA 80 (208)
Q Consensus 3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~~ 80 (208)
..|+|.|..+.+++++|+++.|+| .|++|++++|-||+.|+ ++|.++.++++++.++ +||+++.+|+.+.. ..++.
T Consensus 177 vsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~ev 254 (375)
T KOG0022|consen 177 VSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAK-EFGATEFINPKDLKKPIQEV 254 (375)
T ss_pred ccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHH-hcCcceecChhhccccHHHH
Confidence 568899998999999999999999 69999999999999999 9999999999999999 99999999988532 48889
Q ss_pred HHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+++++++|+|+.|||+|. +.+.+++.+.+.| |.-+.+|.... .......+..++ .+.++.|+..+-+.. +.
T Consensus 255 i~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----~~~i~~~p~~l~-~GR~~~Gs~FGG~K~--~~ 327 (375)
T KOG0022|consen 255 IIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----GQEISTRPFQLV-TGRTWKGSAFGGFKS--KS 327 (375)
T ss_pred HHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----Ccccccchhhhc-cccEEEEEecccccc--hh
Confidence 999999999999999995 7899999999998 99999998763 233334444444 467788877766543 67
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.++.+.+.+.+++++. .+++++||+++++||+.|.+|+.. |.|+.+
T Consensus 328 ~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 328 DIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred hhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 7899999999998874 588999999999999999999987 777653
No 30
>PLN02740 Alcohol dehydrogenase-like
Probab=99.94 E-value=4.9e-25 Score=173.62 Aligned_cols=194 Identities=17% Similarity=0.195 Sum_probs=156.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~ 79 (208)
++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++.+.+ ++.+
T Consensus 182 ~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~ 259 (381)
T PLN02740 182 GVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EMGITDFINPKDSDKPVHE 259 (381)
T ss_pred cchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-HcCCcEEEecccccchHHH
Confidence 46799998878889999999999995 9999999999999999 6999999999999998 99999999887641 4777
Q ss_pred HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+++.+++++|++||++|+ +.+..++.+++++ |+++.+|...+. ....+.... +.+++++.|+...++.. .
T Consensus 260 ~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~~~~~~~~-~~~~~~i~g~~~~~~~~--~ 332 (381)
T PLN02740 260 RIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KMLPLHPME-LFDGRSITGSVFGDFKG--K 332 (381)
T ss_pred HHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ceecccHHH-HhcCCeEEEEecCCCCc--H
Confidence 7877776689999999995 6889999999996 999999975421 111122222 33678888877654321 3
Q ss_pred HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
..++++++++.+|.+++ .++++|+++++++|++.+.+++. .|++|+.
T Consensus 333 ~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 333 SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 45888999999998865 57889999999999999988876 4998863
No 31
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.94 E-value=1.9e-25 Score=161.63 Aligned_cols=198 Identities=21% Similarity=0.244 Sum_probs=160.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLD 78 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~ 78 (208)
.-+|||.+|.++-++.+||+|...||+++||++.+|+||++|++.+.++|+....+.+++ .+|+++||.-.+. .-.
T Consensus 144 NP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~~ 222 (354)
T KOG0025|consen 144 NPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RDR 222 (354)
T ss_pred CchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cch
Confidence 568999999999999999999999999999999999999999999999988776665543 6899999865442 111
Q ss_pred HHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----
Q 028523 79 AALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----- 152 (208)
Q Consensus 79 ~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 152 (208)
+..+..... ++.+.|||+|+.+.....+.|.+||+++.+|..+. ++...+...++++++.+.|+++..|
T Consensus 223 ~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~ 297 (354)
T KOG0025|consen 223 KMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHK 297 (354)
T ss_pred hhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceeeeeeeeehhhccC
Confidence 111111122 78999999999999999999999999999999873 5566777889999999999999988
Q ss_pred -ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCC-ccceEEEEe
Q 028523 153 -FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR-NVGKQVVEV 205 (208)
Q Consensus 153 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~ 205 (208)
++...+...++.+++..|+++.+.....+|++...|++...... ..||-++.+
T Consensus 298 ~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 298 SPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred CcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 34445778999999999999999888899999988887655544 335666654
No 32
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.94 E-value=8.3e-25 Score=170.95 Aligned_cols=188 Identities=20% Similarity=0.204 Sum_probs=153.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++......++|++++|+| +|++|++++|+|+.+|++++++++++++...+.+++|++.++++.+. +.+
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~----~~~ 238 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA----AEM 238 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh----HHH
Confidence 4678999997777778999999997 59999999999999999999998888877666547999887765432 234
Q ss_pred HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.+.+. ++|++||++|. ..+..++++++++|+++.+|...+ .........+.+++++.|+.... ...+
T Consensus 239 ~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~~~ 306 (357)
T PLN02514 239 QEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKVITGSFIGS-----MKET 306 (357)
T ss_pred HHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcEEEEEecCC-----HHHH
Confidence 44433 69999999995 688999999999999999997642 12344556777889999887654 4568
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 207 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 207 (208)
+++++++++|.+.+.+ ++|+++++.+|++.+.+++..||+|+.++.
T Consensus 307 ~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 307 EEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred HHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 8899999999998776 479999999999999999988999998864
No 33
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.94 E-value=1.5e-24 Score=170.23 Aligned_cols=194 Identities=18% Similarity=0.184 Sum_probs=151.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC-ccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~ 79 (208)
+++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. .++.+
T Consensus 169 ~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~ 246 (368)
T TIGR02818 169 GVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KLGATDCVNPNDYDKPIQE 246 (368)
T ss_pred hhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCeEEcccccchhHHH
Confidence 56799999988889999999999985 9999999999999999 8999999999999998 9999999987742 14667
Q ss_pred HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... ..........+ ++..+.++..... ...
T Consensus 247 ~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~--~~~ 319 (368)
T TIGR02818 247 VIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQLV-TGRVWRGSAFGGV--KGR 319 (368)
T ss_pred HHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHHh-ccceEEEeeccCC--CcH
Confidence 7777776689999999995 6788999999886 999999975321 11112222222 2334555543221 114
Q ss_pred HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
..+.++++++.+|.++ +.++++|+|+++.+|++.+.+++. .|++|.+
T Consensus 320 ~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 320 TELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred HHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 5688899999999886 457899999999999999988765 6998864
No 34
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.94 E-value=2.2e-24 Score=169.31 Aligned_cols=193 Identities=23% Similarity=0.270 Sum_probs=152.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~ 79 (208)
+++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++.+ ++.+
T Consensus 170 ~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~ 247 (368)
T cd08300 170 GVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK-KFGATDCVNPKDHDKPIQQ 247 (368)
T ss_pred chhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCEEEcccccchHHHH
Confidence 56799999878889999999999985 9999999999999999 7999999999999998 99999999887642 4777
Q ss_pred HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|..... ........... .+..+.++....+. ..
T Consensus 248 ~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~~-~~~~~~g~~~~~~~--~~ 320 (368)
T cd08300 248 VLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQLV-TGRVWKGTAFGGWK--SR 320 (368)
T ss_pred HHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHHHh-hcCeEEEEEecccC--cH
Confidence 7887776689999999996 6889999999886 999999875321 11111222222 33455555543332 24
Q ss_pred HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+.+.++++++.+|.+++ .++++|+|+++.+|++.+.+++. .|++|+
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 56788999999999985 47889999999999999988775 588873
No 35
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.93 E-value=2.3e-24 Score=166.81 Aligned_cols=201 Identities=53% Similarity=0.885 Sum_probs=163.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++...+.+.++++|+|+|++|++|++++|+++..|++|+++++++++.+.+++.+|++.++++++. ++..++
T Consensus 129 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v 207 (329)
T cd05288 129 TGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEAL 207 (329)
T ss_pred HHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHH
Confidence 5678999998888899999999999999999999999999999999999999999999833999889988876 677777
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
.+..++++|+++||+|+..+..++++++++|+++.+|..............+....+.+++++.+...........+.+.
T Consensus 208 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (329)
T cd05288 208 KEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALA 287 (329)
T ss_pred HHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHH
Confidence 77765589999999999899999999999999999987543211000001234556778888888766543333356788
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
++++++.+|.+++....+++++++.++++.+.+++..+|+++
T Consensus 288 ~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 288 ELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 899999999998776677899999999999998888888874
No 36
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.93 E-value=2.9e-24 Score=165.74 Aligned_cols=196 Identities=23% Similarity=0.302 Sum_probs=164.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++...+.+.+|++|+|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|++.++++.+. ++...+
T Consensus 122 ~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 199 (323)
T cd05282 122 NPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRV 199 (323)
T ss_pred cHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHH
Confidence 56789999988888999999999999999999999999999999999999999999998 8999999988775 677778
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL 155 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 155 (208)
.+.+++ ++|+++||+|+......+++++++|+++.+|..... ....+...+..+++++.+.....+ +..
T Consensus 200 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05282 200 KEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEA 274 (323)
T ss_pred HHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHH
Confidence 777776 899999999988888999999999999999875431 122333444448888888776543 234
Q ss_pred hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
..+.+.++++++.++.+.+...++++++++.++++.+.++...+|+|++
T Consensus 275 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 275 KQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 4567888999999999988777889999999999999998888899863
No 37
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.93 E-value=3.3e-24 Score=168.41 Aligned_cols=192 Identities=19% Similarity=0.216 Sum_probs=154.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC-ccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-PDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~-~~~~~ 79 (208)
+++|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++.+. +.+.+
T Consensus 171 ~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~ 248 (369)
T cd08301 171 GVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK-KFGVTEFVNPKDHDKPVQE 248 (369)
T ss_pred hhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEEcccccchhHHH
Confidence 45789998888889999999999985 9999999999999999 8999999999999998 8999988887752 15666
Q ss_pred HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+++.+++++|++||++|+ ..+..++.+++++ |+++.+|..... .........+ .+++++.|+....+. .+
T Consensus 249 ~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~~~~~-~~~~~i~g~~~~~~~--~~ 321 (369)
T cd08301 249 VIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTHPMNL-LNGRTLKGTLFGGYK--PK 321 (369)
T ss_pred HHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccCHHHH-hcCCeEEEEecCCCC--hH
Confidence 7777776689999999995 5788999999996 999999986521 1112222333 468889887765432 13
Q ss_pred HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
..++++++++.+|.+++ .++++|+++++++|++.+.+++.. |++|
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 322 TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 46888999999998765 467899999999999999998864 8876
No 38
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.93 E-value=2.1e-24 Score=171.50 Aligned_cols=185 Identities=16% Similarity=0.144 Sum_probs=150.3
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHhc--------CCC-eeEecCCCccHHH
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC---YVVGSAGSKDKVDLLKNKF--------GFD-EAFNYKEEPDLDA 79 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~---~v~~~~~s~~~~~~~~~~~--------g~~-~v~~~~~~~~~~~ 79 (208)
+.+++++|++|+|+|++|++|++++|+|+.+|+ +|+++++++++++.++ ++ |++ .++++++.+++.+
T Consensus 169 ~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~ 247 (410)
T cd08238 169 HRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATIDDLHA 247 (410)
T ss_pred hhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-HhccccccccCceEEEECCCccccHHH
Confidence 457889999999999899999999999999854 8999999999999998 76 665 4677764226778
Q ss_pred HHHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+++.+++ ++|++||++| .+.+..++++++++|+++.++...... ....++...++.+++++.|+.... .
T Consensus 248 ~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~---~~~~~~~~~~~~~~~~i~g~~~~~-----~ 319 (410)
T cd08238 248 TLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKN---FSAPLNFYNVHYNNTHYVGTSGGN-----T 319 (410)
T ss_pred HHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCC---ccccccHHHhhhcCcEEEEeCCCC-----H
Confidence 88888877 8999999998 578899999999999888775432110 112345567778899999877543 4
Q ss_pred HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
..++++++++.+|++++ .++++|+++++.+|++.+. ++..||+||.++
T Consensus 320 ~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 320 DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 56889999999999987 5788999999999999999 777899999874
No 39
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.93 E-value=6.5e-24 Score=163.86 Aligned_cols=196 Identities=26% Similarity=0.348 Sum_probs=163.4
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++||| ++...++++++++++|+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++...+
T Consensus 127 ~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 203 (324)
T cd08244 127 DGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQV 203 (324)
T ss_pred hHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHH
Confidence 457785 4557788999999999999999999999999999999999999999999997 8999888888876 777777
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF 159 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (208)
.+..++ ++|+++|++|+.....++++++++|+++.+|..... ....+....+.+++++.+...... +....+.
T Consensus 204 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (324)
T cd08244 204 REALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRRGVTVVGLLGVQAERGGLRAL 278 (324)
T ss_pred HHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhCCcEEEEeecccCCHHHHHHH
Confidence 777766 899999999988889999999999999999875421 112333456788888888776543 3334567
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.+.++++.++.+.+.+...++++++.+|++.+.++...+|+++++
T Consensus 279 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 279 EARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8889999999999877778899999999999999999999999864
No 40
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.93 E-value=5.8e-24 Score=166.75 Aligned_cols=192 Identities=19% Similarity=0.214 Sum_probs=152.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~ 79 (208)
+++|||+++.+.+++++|++|+|+| +|++|++++|+++.+|+ +|+++++++++.+.++ ++|++.++++.+.+ ++.+
T Consensus 168 ~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~ 245 (365)
T cd08277 168 GFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAK-EFGATDFINPKDSDKPVSE 245 (365)
T ss_pred hhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCCcEeccccccchHHH
Confidence 5679999987888999999999997 59999999999999999 7999999999999998 89999998876531 3566
Q ss_pred HHHhHCCCCccEEEeCCCc-hhHHHHHHhhccC-CEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVGG-KMLDAVLLNMRIQ-GRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...+. ....+...++ .++++.++....+. ..
T Consensus 246 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~-~~~~i~g~~~~~~~--~~ 317 (365)
T cd08277 246 VIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-----ELSIRPFQLI-LGRTWKGSFFGGFK--SR 317 (365)
T ss_pred HHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----ccccCHhHHh-hCCEEEeeecCCCC--hH
Confidence 7777766689999999994 6788999999885 999999986421 1112233333 37788877765432 13
Q ss_pred HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
..+.+++++++++.++ +.++++|+++++++|++.+.+++ ..|+++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence 4578899999998765 56788999999999999998887 4588763
No 41
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.93 E-value=1e-23 Score=166.89 Aligned_cols=192 Identities=21% Similarity=0.295 Sum_probs=157.2
Q ss_pred chhhHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc----
Q 028523 2 PGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP---- 75 (208)
Q Consensus 2 ~~~tA~~~l~~~--~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~---- 75 (208)
+++|||+++... +++++|++|+|+|++|++|++++|+++.+|++++++++++++.+.++ ++|++.++++++.+
T Consensus 175 ~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~i~~~~~~~~~~ 253 (393)
T cd08246 175 VGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGVINRRDFDHWGV 253 (393)
T ss_pred cHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEEEcccccccccc
Confidence 578999998765 68899999999999999999999999999999999999999999998 89999888864320
Q ss_pred -----------------cHHHHHHhHCCC--CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHH
Q 028523 76 -----------------DLDAALKRYFPE--GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTC 136 (208)
Q Consensus 76 -----------------~~~~~~~~~~~~--~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 136 (208)
.+...+.+.+++ ++|++||++|+..+..++++++++|+++.+|..... ....+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~ 328 (393)
T cd08246 254 LPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY-----NHTYDNRY 328 (393)
T ss_pred cccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC-----CCCCcHHH
Confidence 244556666665 699999999988899999999999999999875421 12234455
Q ss_pred HhhcceeEEEeeccccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcC-CccceEEEE
Q 028523 137 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSG-RNVGKQVVE 204 (208)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~ 204 (208)
++.++.++.+.+... .+.+.++++++.++.+.+.++++++++++.++++.+.++ ...||+++-
T Consensus 329 l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 329 LWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 566777777765543 345778899999999988777899999999999999998 788999874
No 42
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.93 E-value=9.4e-24 Score=163.69 Aligned_cols=185 Identities=22% Similarity=0.283 Sum_probs=155.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.. ..+.++++|+|+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++.+. ++...+
T Consensus 148 ~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~ 223 (333)
T cd08296 148 AGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE-DVAEAL 223 (333)
T ss_pred hhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc-cHHHHH
Confidence 46789999965 4899999999999 799999999999999999999999999999998 8999999988876 676666
Q ss_pred HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.+. +++|+++|+.| +..+..++++++++|+++.+|.... ....+...++.+++++.++.... ...+
T Consensus 224 ~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~ 290 (333)
T cd08296 224 QEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-----ALDS 290 (333)
T ss_pred Hhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC-----HHHH
Confidence 655 36999999987 6788999999999999999988541 12344556678899999877433 4567
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
..+++++.++.+++.+ .+++++++.+|++.+.+++..||+|++
T Consensus 291 ~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 291 EDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 7788888899888765 579999999999999999999999874
No 43
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.93 E-value=7.4e-24 Score=166.00 Aligned_cols=191 Identities=21% Similarity=0.232 Sum_probs=152.4
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc---H
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD---L 77 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---~ 77 (208)
+++|||+++......++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++++. + +
T Consensus 161 ~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~ 237 (361)
T cd08231 161 ALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EFGADATIDIDEL-PDPQR 237 (361)
T ss_pred HHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCCeEEcCccc-ccHHH
Confidence 5789999998777777999999997 59999999999999999 9999999999999998 8999988887754 3 2
Q ss_pred HHHHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523 78 DAALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL 155 (208)
Q Consensus 78 ~~~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (208)
...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... .........++.+++++.++....
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---- 309 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKNLTIIGVHNYD---- 309 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhcccEEEEcccCC----
Confidence 3467777776 89999999985 6788999999999999999875421 112233445677888888877543
Q ss_pred hHHHHHHHHHHHHCC----CceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 156 YPKFLEMMIPRIKEG----KIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.+.++++++++.++ .+.+.++++|+++++.+|++.+.++.. +|+||.+
T Consensus 310 -~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 310 -PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred -chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 33466677777766 344567888999999999999988774 7999863
No 44
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.92 E-value=3.4e-23 Score=160.28 Aligned_cols=201 Identities=40% Similarity=0.711 Sum_probs=161.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++.+.+++.+|++++|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++++.+. ++...+
T Consensus 123 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~ 200 (329)
T cd08250 123 SGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVL 200 (329)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHH
Confidence 56899999988889999999999999999999999999999999999999999999998 8999888887765 666666
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-C---CCccchHHHhhcceeEEEeeccccccchH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-P---EGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+..++++|++||+.|+..+..++++++++|+++.+|......... . .........+.+++++.++....+.....
T Consensus 201 ~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (329)
T cd08250 201 KKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIP 280 (329)
T ss_pred HHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHH
Confidence 6655558999999999989999999999999999998764321000 0 00111234567888888887654433345
Q ss_pred HHHHHHHHHHHCCCceeee--eeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 158 KFLEMMIPRIKEGKIVYVE--DKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+.+.++++++.++.+.+.+ ...++++++.+|++.+.++...+|+|++
T Consensus 281 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 281 QHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 6788899999999998743 3568999999999999998888899874
No 45
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.92 E-value=2.1e-23 Score=162.71 Aligned_cols=188 Identities=27% Similarity=0.319 Sum_probs=153.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++ ..+++++|++++|+|++|++|++++|+|+.+|++++++++++ +.+.++ ++|++.+++..+. ...+
T Consensus 162 ~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~-- 235 (350)
T cd08274 162 SYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD-- 235 (350)
T ss_pred HHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH--
Confidence 567899998 678899999999999999999999999999999999998665 788887 8998765554433 4443
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
...+.+ ++|++||++|++.+..++++++++|+++.+|.... .....+...++.+++++.++.... .+.+
T Consensus 236 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 305 (350)
T cd08274 236 AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----REVF 305 (350)
T ss_pred HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HHHH
Confidence 344444 89999999999899999999999999999986432 112344556677888888877643 5678
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.++++++.++.+.+.+.++++++++.++++.+.++...+|+|+.+
T Consensus 306 ~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 306 RRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 889999999999887778899999999999999888889999864
No 46
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.92 E-value=2.7e-23 Score=160.99 Aligned_cols=200 Identities=25% Similarity=0.347 Sum_probs=162.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc-HHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-LDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~~ 80 (208)
++.|||+++.+.+.+.+|++|+|+|++|++|++++|+++..|++++++++++++.+.++ ++|.+.++++.+. + +..+
T Consensus 124 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 201 (334)
T PTZ00354 124 AFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPK 201 (334)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHH
Confidence 46789999988889999999999999999999999999999999888998999999998 8999888887765 4 6777
Q ss_pred HHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----cc
Q 028523 81 LKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FH 154 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 154 (208)
+.+.+++ ++|++||+.+++.+..++++++++|+++.++...+.+ ....+....+.++.++.+...... +.
T Consensus 202 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (334)
T PTZ00354 202 VKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAK----VEKFNLLPLLRKRASIIFSTLRSRSDEYKAD 277 (334)
T ss_pred HHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCc----ccccCHHHHHhhCCEEEeeeccccchhhhHH
Confidence 7777765 8999999999899999999999999999998643211 111334445566667777654432 12
Q ss_pred chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523 155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 207 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 207 (208)
...+.+..+.+++.++.+.+.+.+.++++++.++++.+.++...+|+|+.+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 278 LVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred HHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 22355677889999999988777889999999999999988888999998764
No 47
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.92 E-value=3.6e-23 Score=163.98 Aligned_cols=195 Identities=20% Similarity=0.269 Sum_probs=157.7
Q ss_pred chhhHHHHHHH--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc----
Q 028523 2 PGMTAYAGFFE--VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP---- 75 (208)
Q Consensus 2 ~~~tA~~~l~~--~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~---- 75 (208)
+++|||+++.. .+++.+|++++|+|++|++|++++|+++.+|++++++++++++.+.++ ++|++.++|+++.+
T Consensus 171 ~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~ 249 (398)
T TIGR01751 171 TGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAVIDRNDFGHWGR 249 (398)
T ss_pred hHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEEecCCCcchhhc
Confidence 56889999865 477899999999999999999999999999999999888999999999 79999988875420
Q ss_pred -----------------cHHHHHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH
Q 028523 76 -----------------DLDAALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL 137 (208)
Q Consensus 76 -----------------~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 137 (208)
.+...+.+.+++ ++|++|||+|...+..++++++++|+++.+|.....+ ...+....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~ 324 (398)
T TIGR01751 250 LPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYN-----HDYDNRYL 324 (398)
T ss_pred cccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCC-----CCcCHHHH
Confidence 134456666665 8999999999888899999999999999998765311 12334445
Q ss_pred hhcceeEEEeeccccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEecC
Q 028523 138 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVAT 207 (208)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 207 (208)
+.++.++.+..... .+.+.++++++.++.+.+.+.+++++++++++++.+.++...||+|+++..
T Consensus 325 ~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 389 (398)
T TIGR01751 325 WMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA 389 (398)
T ss_pred hhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence 55666666655433 234678889999999998888899999999999999999989999998864
No 48
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.92 E-value=2.7e-23 Score=161.61 Aligned_cols=198 Identities=26% Similarity=0.278 Sum_probs=160.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHhcCCCeeEecCCC--c
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKNKFGFDEAFNYKEE--P 75 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----~~~~~~~~~~g~~~v~~~~~~--~ 75 (208)
+++|||+++...+.+++|++|||+|++|++|++++|+|++.|++++++++++ ++.+.++ ++|++.++++++. .
T Consensus 130 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~ 208 (341)
T cd08290 130 NPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSL 208 (341)
T ss_pred cHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccc
Confidence 5689999998888899999999999999999999999999999999999776 5678887 8999998887652 0
Q ss_pred cHHHHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---
Q 028523 76 DLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY--- 152 (208)
Q Consensus 76 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 152 (208)
++...+....++++|+++||+|+..+...+++++++|+++.+|.... ..........+.+++++.+......
T Consensus 209 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (341)
T cd08290 209 LATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSG-----QPVTVPTSLLIFKDITLRGFWLTRWLKR 283 (341)
T ss_pred cHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCC-----CCcccCHHHHhhCCceEEEEecHHHHhh
Confidence 45566666655479999999998888889999999999999986442 1122344456788999988776432
Q ss_pred --ccchHHHHHHHHHHHHCCCceeeeeeee---cCCcHHHHHHHHhcCCccceEEEEe
Q 028523 153 --FHLYPKFLEMMIPRIKEGKIVYVEDKAE---GLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 153 --~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+......+.++++++.+|.+.+....++ +++++.++++.+.++...+|+|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 284 ANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred cCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 2233457888999999999988766677 9999999999999988889999874
No 49
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.92 E-value=5.1e-23 Score=158.08 Aligned_cols=197 Identities=26% Similarity=0.349 Sum_probs=162.4
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
.+++||+++.+.+++.+|++|+|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++.++++.+. .+...+
T Consensus 120 ~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 197 (320)
T cd05286 120 QGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERV 197 (320)
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHH
Confidence 46788999988889999999999999999999999999999999999999999999997 8999888887765 677778
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccchH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYP 157 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 157 (208)
...+.+ ++|.+++|.++.....++++++++|+++.+|.... ..........+.+++++.+.....+ +....
T Consensus 198 ~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (320)
T cd05286 198 REITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASG-----PVPPFDLLRLSKGSLFLTRPSLFHYIATREELL 272 (320)
T ss_pred HHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCC-----CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHH
Confidence 777766 89999999998888999999999999999987542 1112233333477888776554333 33345
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.+.++++++.++.+.+...+.++++++.++++.+.++...+|+++++
T Consensus 273 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 273 ARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 667889999999998877778899999999999999988889999864
No 50
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.92 E-value=4.3e-23 Score=161.97 Aligned_cols=192 Identities=24% Similarity=0.289 Sum_probs=158.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++.+.+.+.++++|+|+| +|++|++++|+|+..|++ +++++.++++.+.++ ++|++.++++++. ++..+
T Consensus 171 ~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~ 247 (367)
T cd08263 171 AGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAA 247 (367)
T ss_pred hHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHH
Confidence 5789999998888889999999996 699999999999999997 998988999999888 8999999998876 77778
Q ss_pred HHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+++..++ ++|+++|++++. ....++++|+++|+++.++..... .....+...++.+++++.++.... ..+
T Consensus 248 l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 319 (367)
T cd08263 248 IREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPITRLVRRGIKIIGSYGAR----PRQ 319 (367)
T ss_pred HHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCHHHHhhCCeEEEecCCCC----cHH
Confidence 8777665 899999999986 889999999999999999865421 112234444446788877743221 146
Q ss_pred HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.+++++++++++.+.+. +++.++++++.++++.+.++...||+||+
T Consensus 320 ~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 320 DLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred HHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 78889999999998864 56789999999999999999988999984
No 51
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.92 E-value=7.7e-23 Score=159.06 Aligned_cols=190 Identities=23% Similarity=0.294 Sum_probs=158.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.. .++++++++||+|+++++|++++|+|+++|++|+++++++++.+.++ ++|++.++++++. ++...+
T Consensus 150 ~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~ 226 (341)
T cd08297 150 AGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKKS-DDVEAV 226 (341)
T ss_pred chHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCCc-cHHHHH
Confidence 46899999866 58999999999999888999999999999999999999999999997 8999999988876 777888
Q ss_pred HhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 82 KRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
.+..++ ++|+++|+.+ +..+..++++++++|+++.+|.... .....+......+++++.+..... .+.
T Consensus 227 ~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 296 (341)
T cd08297 227 KELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSLVGT-----RQD 296 (341)
T ss_pred HHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEeccCC-----HHH
Confidence 877765 8999999766 6788999999999999999986542 112234455557788887754432 567
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
++++++++.++.+.+.+ ..+++++++++++.+..+...||+++++
T Consensus 297 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 297 LQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 88899999999998755 5789999999999999999899999875
No 52
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.92 E-value=7e-23 Score=159.84 Aligned_cols=189 Identities=20% Similarity=0.259 Sum_probs=156.1
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++.+...+.++++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++++. .+.+.
T Consensus 159 ~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~ 235 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVNGSDP-DAAKR 235 (350)
T ss_pred hhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEecCCCc-cHHHH
Confidence 5789999998877777899999996 69999999999999999 7999998999999997 8999888888776 66667
Q ss_pred HHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
+.+..++++|++||++| ...+..++++|+++|+++.+|..... ...+......+++++.+..... .+.
T Consensus 236 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~ 304 (350)
T cd08240 236 IIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGS-----LEE 304 (350)
T ss_pred HHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCC-----HHH
Confidence 77665558999999998 57899999999999999999875421 1122233344777777766543 366
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+.+++++++++.+++.....++++++.++++.+.+++..+|++++
T Consensus 305 ~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 305 LRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred HHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 888999999999987777789999999999999999888999985
No 53
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.92 E-value=7.3e-23 Score=157.57 Aligned_cols=194 Identities=21% Similarity=0.254 Sum_probs=154.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++...+.+.+|++|+|+|++|++|++++|+|++.|++|+++++++++.+.++ ++|++.+++. .. ++.+.+
T Consensus 126 ~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i 202 (320)
T cd08243 126 TYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQL 202 (320)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHH
Confidence 57899999988888999999999999999999999999999999999999999999998 8999887754 33 666777
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
.+. +.++|+++|++++..+..++++++++|+++.+|...+.... ..........+.+++++.+...... ....++
T Consensus 203 ~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 277 (320)
T cd08243 203 RAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTL-EDFNPMDDIPSGVNLTLTGSSSGDV---PQTPLQ 277 (320)
T ss_pred HHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCccc-CCcchhhhhhhccceEEEecchhhh---hHHHHH
Confidence 777 45899999999998899999999999999999875321100 0000111112356677666654321 245688
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
.+.+++.++.+++.+...++++++.+|++.+.++...+|+|+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 278 ELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 899999999998877788999999999999998888889886
No 54
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.92 E-value=4.3e-23 Score=160.26 Aligned_cols=193 Identities=26% Similarity=0.310 Sum_probs=155.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
++.|+|++.......+++++|+|+|+ |++|++++++++..|+ +|++++.++++++.+++..|++.+++..+. +....
T Consensus 152 pla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~-~~~~~ 229 (350)
T COG1063 152 PLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED-DAGAE 229 (350)
T ss_pred hhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc-cHHHH
Confidence 45688777545555666669999995 9999999999999998 899999999999999933666666665554 56777
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+.+.+ ++|++|||+|. ..+..++++++++|+++.+|...... ...+....+.+++++.|+.... ...
T Consensus 230 ~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~l~gs~~~~----~~~ 300 (350)
T COG1063 230 ILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELTLRGSLRPS----GRE 300 (350)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccEEEeccCCC----Ccc
Confidence 8888888 99999999995 67899999999999999999976421 1355678889999999984322 145
Q ss_pred HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCc-cceEEEEe
Q 028523 159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRN-VGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 205 (208)
.++.+++++++|++.+. +++.++++++++|++.+.+.+. .-|+++.+
T Consensus 301 ~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 68899999999999864 5678899999999999998654 55888764
No 55
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.91 E-value=1.1e-22 Score=160.51 Aligned_cols=195 Identities=16% Similarity=0.228 Sum_probs=145.1
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEE-EEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYV-VGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v-~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++. .+++++|++|+|.| +|++|++++|+|+.+|+++ +++++++++.+.++ ++|++. +++...+++.+.
T Consensus 170 ~~~ta~~a~~-~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~-~~Ga~~-v~~~~~~~~~~~ 245 (393)
T TIGR02819 170 IFPTGYHGAV-TAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR-SFGCET-VDLSKDATLPEQ 245 (393)
T ss_pred HHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-HcCCeE-EecCCcccHHHH
Confidence 3678999984 57899999999966 5999999999999999964 44566788999999 899974 555432267777
Q ss_pred HHhHCCC-CccEEEeCCCch---------------hHHHHHHhhccCCEEEEEecccc-cCCCC------CCCccchHHH
Q 028523 81 LKRYFPE-GINIYFENVGGK---------------MLDAVLLNMRIQGRITLCGMISQ-YNNDK------PEGVHNLTCL 137 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~~~~~------~~~~~~~~~~ 137 (208)
+.+.+++ ++|++||++|.+ .+..++++++++|+++.+|.... ..... ....+.....
T Consensus 246 v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~ 325 (393)
T TIGR02819 246 IEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLG 325 (393)
T ss_pred HHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHh
Confidence 8877776 899999999964 79999999999999999998631 11000 0112223344
Q ss_pred hhcceeEEEeeccccccchHHHHHHHHHHHHCCCcee--eee-eeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 138 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVY--VED-KAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
+.+++++.+... ...+++.++++++.+|++.+ .++ ++|+|+++++|++.+.+++. +|++|.++
T Consensus 326 ~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 326 WAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDPH 391 (393)
T ss_pred hccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence 455556655221 11344578999999999875 345 78999999999999988754 89999874
No 56
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.91 E-value=8e-23 Score=157.96 Aligned_cols=196 Identities=23% Similarity=0.340 Sum_probs=146.8
Q ss_pred chhhHHHHHHHhc--C-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523 2 PGMTAYAGFFEVC--S-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD 78 (208)
Q Consensus 2 ~~~tA~~~l~~~~--~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 78 (208)
+++|||+++.... . ...+++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++. ..
T Consensus 127 ~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~ 203 (326)
T cd08289 127 AGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QE 203 (326)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HH
Confidence 4668888875443 2 345789999999999999999999999999999999999999998 8999888887643 24
Q ss_pred HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523 79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP 157 (208)
Q Consensus 79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 157 (208)
+.+.+..++++|.++|++|+..+..++++++++|+++.+|.... .....+...++.+++++.+...... .....
T Consensus 204 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T cd08289 204 ESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGG-----GEVETTVFPFILRGVNLLGIDSVECPMELRR 278 (326)
T ss_pred HHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCC-----CCCCcchhhhhhccceEEEEEeEecCchHHH
Confidence 45555544489999999998889999999999999999997532 1112234455678888888754321 11122
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.+..+.+.+....+.+.+.++++++++.+|++.+.+++..||+|+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 279 RIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 334444444433333445678899999999999999999999999864
No 57
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.91 E-value=2.3e-22 Score=155.54 Aligned_cols=197 Identities=24% Similarity=0.250 Sum_probs=154.1
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++...+.+.+|++++|+|++|++|++++|+++.+|++|+++++++++.+.++ ++|++.++++++. ++.+.+
T Consensus 124 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 201 (327)
T PRK10754 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERV 201 (327)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHH
Confidence 35788999888889999999999999999999999999999999999999999999998 8999888888766 788888
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeE-EEeecccc---ccch
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRM-EGFLVPDY---FHLY 156 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~ 156 (208)
++.+++ ++|+++||++++.....+++++++|+++.+|..... ........+..++..+ .......+ +...
T Consensus 202 ~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (327)
T PRK10754 202 KEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREEL 276 (327)
T ss_pred HHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHH
Confidence 888776 899999999988889999999999999999875421 1111222221222111 11111111 2233
Q ss_pred HHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 157 PKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.+.+..+++++.+|.+++. ..++++++++.++++.+.++...+|+||.+
T Consensus 277 ~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 277 TEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred HHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 4556778999999999864 457899999999999999999899999863
No 58
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.91 E-value=2.5e-22 Score=156.10 Aligned_cols=187 Identities=22% Similarity=0.282 Sum_probs=154.2
Q ss_pred chhhHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523 2 PGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 79 (208)
+++|||+++... ..+.++++|||+|+ +++|++++|+|+..| .+|+++++++++.+.++ ++|+++++++++ .+.+
T Consensus 150 ~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~ 225 (340)
T cd05284 150 AGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNASD--DVVE 225 (340)
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc--cHHH
Confidence 468999999776 46889999999995 679999999999999 79999999999999998 899988988775 3667
Q ss_pred HHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
++++..++ ++|+++|++|+ .....++++|+++|+++.+|.... ........+.+++++.+..... .
T Consensus 226 ~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-----~ 293 (340)
T cd05284 226 EVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSLWGT-----R 293 (340)
T ss_pred HHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEeccc-----H
Confidence 77777766 89999999995 788999999999999999986541 1122334457888888766432 4
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.+.++++++.+|.+++. ...++++++++|++.+.+++..||+|+.+
T Consensus 294 ~~~~~~~~~l~~g~l~~~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 294 AELVEVVALAESGKVKVE-ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred HHHHHHHHHHHhCCCCcc-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 567889999999998864 45799999999999999999889999864
No 59
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.91 E-value=2.7e-22 Score=156.26 Aligned_cols=192 Identities=21% Similarity=0.292 Sum_probs=158.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~ 80 (208)
+++|||+++.+.+++.++++|+|+| +|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++ . ++...
T Consensus 149 ~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~~~ 225 (345)
T cd08260 149 RFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVE-DVAAA 225 (345)
T ss_pred chHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccch-hHHHH
Confidence 5789999998888999999999999 699999999999999999999999999999998 899999999887 5 67777
Q ss_pred HHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
+.+..++++|++||++| ...+...+++++++|+++.+|...... .....+....+.+++++.+..... .+.
T Consensus 226 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 297 (345)
T cd08260 226 VRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVGSHGMP-----AHR 297 (345)
T ss_pred HHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEeCCcCC-----HHH
Confidence 77766558999999998 478889999999999999998754311 002233444557778887766432 456
Q ss_pred HHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 160 LEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+++++++++++.+.+. +...+++++++++++.+.++...+|+|++
T Consensus 298 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 298 YDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 8889999999998764 56789999999999999999988998864
No 60
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.91 E-value=3e-22 Score=155.38 Aligned_cols=191 Identities=18% Similarity=0.260 Sum_probs=150.2
Q ss_pred chhhHHHHHHHhcCCCC-----CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523 2 PGMTAYAGFFEVCSPKQ-----GEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP 75 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~-----g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 75 (208)
+++|||+++...+++.+ |++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|++.++++.+
T Consensus 127 ~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~-- 203 (336)
T TIGR02817 127 TSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK-- 203 (336)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--
Confidence 56899999988888877 999999999999999999999998 999999999999999998 899999988654
Q ss_pred cHHHHHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecc--c-
Q 028523 76 DLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVP--D- 151 (208)
Q Consensus 76 ~~~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 151 (208)
++..++++..++++|+++|+++ ++.....+++++++|+++.++... ..+...+..+++++.+.... .
T Consensus 204 ~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 274 (336)
T TIGR02817 204 PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSM 274 (336)
T ss_pred CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccc
Confidence 5777777754448999999986 578899999999999999874321 12223334455665543332 1
Q ss_pred c--ccch--HHHHHHHHHHHHCCCceeeeeeeec---CCcHHHHHHHHhcCCccceEEEE
Q 028523 152 Y--FHLY--PKFLEMMIPRIKEGKIVYVEDKAEG---LESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 152 ~--~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+ +... ...+.++++++.++.+++.+.+.++ ++++.+|++.+.+++..||++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 275 FQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred cchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 1 1111 2568889999999999877665554 68999999999999988999875
No 61
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.91 E-value=1.9e-22 Score=155.79 Aligned_cols=195 Identities=22% Similarity=0.345 Sum_probs=149.4
Q ss_pred chhhHHHHHHHhcCC--C-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523 2 PGMTAYAGFFEVCSP--K-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD 78 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~--~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 78 (208)
+++|||+++..+.+. . .+++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++++. ..
T Consensus 127 ~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~ 203 (325)
T cd05280 127 AGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL--LD 203 (325)
T ss_pred HHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH--HH
Confidence 356888888665433 5 4679999999999999999999999999999999999999998 8999888876542 12
Q ss_pred HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523 79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP 157 (208)
Q Consensus 79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 157 (208)
...+....+++|+++|+++++.+..++++++++|+++.+|..... + ........+.+++++.+...... +....
T Consensus 204 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (325)
T cd05280 204 ESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP----E-LTTTVLPFILRGVSLLGIDSVNCPMELRK 278 (325)
T ss_pred HHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCC----c-cccccchheeeeeEEEEEEeecCchhHHH
Confidence 223333334799999999999999999999999999999875421 1 12233444468888888765443 22334
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.++.+.+++..+ +.+.+..++++++++++++.+.++...||+|+++
T Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 279 QVWQKLATEWKPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHHHHhcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 5667777777777 4445777899999999999999999999999864
No 62
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.91 E-value=3.2e-22 Score=154.48 Aligned_cols=194 Identities=24% Similarity=0.353 Sum_probs=151.0
Q ss_pred chhhHHHHHHHh--cCCCCCC-EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523 2 PGMTAYAGFFEV--CSPKQGE-YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD 78 (208)
Q Consensus 2 ~~~tA~~~l~~~--~~~~~g~-~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 78 (208)
+++|||+++... +.+.+|+ +|+|+|++|++|++++|+|+.+|++++++++++++.+.++ ++|++.++++++. +.
T Consensus 126 ~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~- 202 (323)
T TIGR02823 126 AGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP- 202 (323)
T ss_pred hHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH-
Confidence 356777777544 3488898 9999999999999999999999999999988999889997 8999888876543 22
Q ss_pred HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523 79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP 157 (208)
Q Consensus 79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 157 (208)
.++....+++|.++||+|++.+..++++++++|+++.+|.... .....+...++.+++++.+...... .....
T Consensus 203 -~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (323)
T TIGR02823 203 -PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGG-----PDLPTTVLPFILRGVSLLGIDSVYCPMALRE 276 (323)
T ss_pred -HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCC-----CCccccHHHHhhcceEEEEEeccccCchhHH
Confidence 4444544469999999998889999999999999999997642 1112233445578888888765432 22234
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.+..+.+++..+.+.+. ..+++++++++|++.+.++...+|+|+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 277 AAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred HHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 456777788888888765 45899999999999999999899999864
No 63
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.91 E-value=5.3e-22 Score=154.13 Aligned_cols=189 Identities=19% Similarity=0.234 Sum_probs=155.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++++++++ ..+++.+|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+
T Consensus 144 ~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l 219 (337)
T cd08261 144 PLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-DVAARL 219 (337)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc-CHHHHH
Confidence 456788887 778999999999996 589999999999999999999998999999997 8999999998876 788888
Q ss_pred HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
.+..++ ++|+++|+.|+ ..+..++++|+++|+++.+|.... ........+..+++++.+... ...+.
T Consensus 220 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 288 (337)
T cd08261 220 RELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSRN-----ATRED 288 (337)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEecc-----CChhh
Confidence 877766 89999999985 688999999999999999886541 112233344556777666432 23567
Q ss_pred HHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcC-CccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSG-RNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~ 205 (208)
+.++++++.+|.+++ .+..+++++++.++++.+.++ ...+|+|+++
T Consensus 289 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 289 FPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 888999999999987 667789999999999999988 4779999864
No 64
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.91 E-value=1.6e-22 Score=158.14 Aligned_cols=173 Identities=18% Similarity=0.186 Sum_probs=134.0
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccE
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG---SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~---s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
.+++|++|+|+|+ |++|++++|+||++|++|+++++ ++++.+.++ ++|++. +++.+. ++.+ .+ ..+++|+
T Consensus 169 ~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~ 241 (355)
T cd08230 169 PTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGATY-VNSSKT-PVAE-VK--LVGEFDL 241 (355)
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEE-ecCCcc-chhh-hh--hcCCCCE
Confidence 3578999999985 99999999999999999999987 678888888 999986 466554 4443 21 2237999
Q ss_pred EEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccc----hHHHhhcceeEEEeeccccccchHHHHHHHHHH
Q 028523 92 YFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN----LTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPR 166 (208)
Q Consensus 92 v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (208)
+|||+|+ ..+..++++++++|+++.+|...+. ....++ ...++.+++++.|+.... .+.+++++++
T Consensus 242 vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~~ 312 (355)
T cd08230 242 IIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNRDLVLGNKALVGSVNAN-----KRHFEQAVED 312 (355)
T ss_pred EEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhhhHhhcCcEEEEecCCc-----hhhHHHHHHH
Confidence 9999996 5789999999999999999986531 111122 245677899999876543 3456777788
Q ss_pred HHCCC------ceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 167 IKEGK------IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 167 ~~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.++. +++.++++|+++++.+|++.+.++. .|+||++
T Consensus 313 l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 313 LAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 87765 5667889999999999999887654 5999874
No 65
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.91 E-value=4.6e-22 Score=155.31 Aligned_cols=192 Identities=19% Similarity=0.227 Sum_probs=150.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++ ..+.+++|++|||+| +|++|++++|+|+.+|+ .++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 151 ~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~ 226 (351)
T cd08285 151 MMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDYKNG-DVVEQ 226 (351)
T ss_pred chhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecCCCC-CHHHH
Confidence 467899996 668899999999997 59999999999999999 6888888888888888 8999999998876 77778
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccc--hHHHhhcceeEEEeeccccccch
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN--LTCLISKRIRMEGFLVPDYFHLY 156 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 156 (208)
+.+...+ ++|+++|++|+ +.+..++++|+++|+++.+|..... .....+ ......+..++.+..... .
T Consensus 227 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~----~ 298 (351)
T cd08285 227 ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHKTINGGLCPG----G 298 (351)
T ss_pred HHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhccccEEEEeecCC----c
Confidence 8777765 89999999995 6889999999999999999875531 111111 111122334444332211 1
Q ss_pred HHHHHHHHHHHHCCCcee---eeeeeecCCcHHHHHHHHhcCC-ccceEEEEe
Q 028523 157 PKFLEMMIPRIKEGKIVY---VEDKAEGLESAPAALVGLFSGR-NVGKQVVEV 205 (208)
Q Consensus 157 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~ 205 (208)
.+.++++++++++|++++ .+.++++++++.+|++.+.+++ ...|++|++
T Consensus 299 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 299 RLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred cccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 356888999999999987 3445689999999999999987 468999864
No 66
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.90 E-value=9.5e-22 Score=152.41 Aligned_cols=191 Identities=29% Similarity=0.392 Sum_probs=162.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCC-CccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~ 80 (208)
++++||+++...+.+++|++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|.+.++++++ . ++...
T Consensus 144 ~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~ 220 (336)
T cd08276 144 AGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DWGEE 220 (336)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHH
Confidence 4678999998888999999999995 799999999999999999999999999999998 789988888876 4 77778
Q ss_pred HHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
+.+.+++ ++|.++|+.++.....++++++++|+++.+|..... ....+....+.+++++.+..... ...
T Consensus 221 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 290 (336)
T cd08276 221 VLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS-----RAQ 290 (336)
T ss_pred HHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----HHH
Confidence 8888776 899999999988899999999999999999875431 11234566678899998887654 557
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.++.+++.++.+.+.....++++++.++++.+.++...+|+++++
T Consensus 291 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 291 FEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8888899999988877778899999999999999888889999863
No 67
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.90 E-value=7.8e-22 Score=153.10 Aligned_cols=188 Identities=24% Similarity=0.341 Sum_probs=155.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.....++++++|||.| +|++|++++|+|+..|++|+++++++++.+.++ ++|.+.++++.+. ...+.+
T Consensus 149 ~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 225 (338)
T cd08254 149 AVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDD-SPKDKK 225 (338)
T ss_pred hHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCCc-CHHHHH
Confidence 5789999998888899999999976 699999999999999999999999999999998 8999888887765 666666
Q ss_pred HhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 82 KRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
....+ ++|+++||.| ...+..++++|+++|+++.+|.... ....+....+.++.++.++.... .+.
T Consensus 226 -~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 293 (338)
T cd08254 226 -AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGGT-----PED 293 (338)
T ss_pred -HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccCC-----HHH
Confidence 44444 8999999998 4688999999999999999986432 11233455666777777655432 567
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+..+.++++++.+.+. .+.++++++.++++.+.+++..+|+|+++
T Consensus 294 ~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 294 LPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 8889999999999876 56899999999999999999899999875
No 68
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.90 E-value=8.9e-22 Score=151.58 Aligned_cols=196 Identities=29% Similarity=0.401 Sum_probs=161.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++..++++.+|++++|+|+++++|++++++++..|++|+++++++++.+.+. ++|.+.++++... ++...+
T Consensus 128 ~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 205 (325)
T cd08253 128 PALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRI 205 (325)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHH
Confidence 56789999988889999999999999999999999999999999999999999999998 8999888888766 677777
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchHHH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYPKF 159 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (208)
.+...+ ++|+++++.++......+++++++|+++.++.... .........+.++.++.+...... +....+.
T Consensus 206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (325)
T cd08253 206 LAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAA 279 (325)
T ss_pred HHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHH
Confidence 777665 89999999998888889999999999999987541 112223334667777776654332 3444567
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+..+.+++.++.+++.....++++++.++++.+.++...+|+++++
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 280 AEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 8888889999999887778899999999999999988889999864
No 69
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.90 E-value=8.7e-22 Score=150.81 Aligned_cols=187 Identities=24% Similarity=0.281 Sum_probs=150.1
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++...... +|++++|+|++|++|++++++++..|++|+.+++++++.+.++ ++|++.++...+ +
T Consensus 117 ~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~----- 187 (305)
T cd08270 117 AGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E----- 187 (305)
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-----
Confidence 467999999777655 5999999999999999999999999999999999999999999 799876553321 1
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhh--cceeEEEeeccccccchHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS--KRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 159 (208)
..++++|+++|++|+..+..++++|+++|+++.+|.... .....+...+.. ++.++.++.... +....+.
T Consensus 188 --~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 259 (305)
T cd08270 188 --LSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAAD 259 (305)
T ss_pred --ccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHH
Confidence 122369999999998889999999999999999987541 112223333333 477887777653 2334567
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+..+++++.++.+++.+.+++++++++++++.+.++...||+|+++
T Consensus 260 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 260 LARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8899999999999987778899999999999999999889999874
No 70
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.90 E-value=1.1e-21 Score=152.42 Aligned_cols=189 Identities=24% Similarity=0.323 Sum_probs=151.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++ ..+.+++|++|+|+| +|++|++++|+++.. |++|+++++++++.+.++ ++|++.+++++..+++...
T Consensus 147 ~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~ 223 (338)
T PRK09422 147 AGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRVEDVAKI 223 (338)
T ss_pred chhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccccccHHHH
Confidence 568999998 778999999999999 599999999999984 999999999999999998 8999889888652266677
Q ss_pred HHhHCCCCccE-EEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPEGINI-YFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~~~d~-v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
+++..+ ++|. ++++.++..+..++++++++|+++.+|.... ....+......+..++.++.... .+.
T Consensus 224 v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 291 (338)
T PRK09422 224 IQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSLVGT-----RQD 291 (338)
T ss_pred HHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEecCCC-----HHH
Confidence 777665 6884 4555557889999999999999999986531 11223444555677776654332 456
Q ss_pred HHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 160 LEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
++++++++.+|.+.+.+. .+++++++++++.+.++...||+++.+.
T Consensus 292 ~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 292 LEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 888999999999877655 5899999999999999998999998753
No 71
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.90 E-value=9.3e-22 Score=154.29 Aligned_cols=193 Identities=22% Similarity=0.331 Sum_probs=155.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++...+.+++|++|+|+| +|++|++++|+|+..|+ +++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 170 ~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~ 246 (365)
T cd08278 170 GIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAK-ELGATHVINPKEE-DLVAA 246 (365)
T ss_pred hhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCcEEecCCCc-CHHHH
Confidence 5788999988888999999999997 59999999999999999 6888888988988888 8999999988776 77777
Q ss_pred HHhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
+.+.++.++|+++||+|+ ..+..++++++++|+++.+|.... ......+...++.+++++.++..... ...+.
T Consensus 247 v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 320 (365)
T cd08278 247 IREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----GAEVTLDVNDLLVSGKTIRGVIEGDS--VPQEF 320 (365)
T ss_pred HHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----CCccccCHHHHhhcCceEEEeecCCc--ChHHH
Confidence 877774489999999984 788999999999999999987531 11223445555578888887765332 11466
Q ss_pred HHHHHHHHHCCCcee-eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 160 LEMMIPRIKEGKIVY-VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+.++++++.+|.+.+ .+...++++++.+|++.+.++... |+||+
T Consensus 321 ~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 321 IPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred HHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 788999999999864 344579999999999999887754 77764
No 72
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.90 E-value=2.2e-22 Score=154.34 Aligned_cols=174 Identities=16% Similarity=0.192 Sum_probs=132.9
Q ss_pred hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
.+|||+++.+ . ..++++++|+| +|++|++++|+|+++|++ |++++.++++++.+. .+ .++|+.+ .
T Consensus 131 ~~~a~~~~~~-~-~~~~~~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~----- 196 (308)
T TIGR01202 131 AATARHAVAG-A-EVKVLPDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D----- 196 (308)
T ss_pred HHHHHHHHHh-c-ccCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c-----
Confidence 5789999955 3 34688999998 599999999999999996 555666666665554 33 4454422 1
Q ss_pred HhHCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.+.++|++|||+|+ ..++.++++++++|+++.+|.... ....+....+.+++++.++.... .+.+
T Consensus 197 ---~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~ 262 (308)
T TIGR01202 197 ---PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDL 262 (308)
T ss_pred ---cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHH
Confidence 12379999999997 468999999999999999997542 12234455667788887765432 5678
Q ss_pred HHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 161 EMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 161 ~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+++++++.+|.+++ .++++|+|+++.+|++.+.++...+|++|+
T Consensus 263 ~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 263 HAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 99999999999976 478899999999999988877777899874
No 73
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.90 E-value=6.7e-22 Score=153.68 Aligned_cols=189 Identities=21% Similarity=0.251 Sum_probs=150.7
Q ss_pred chhhHHHHHHHhcCC----------CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEec
Q 028523 2 PGMTAYAGFFEVCSP----------KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 71 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~----------~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~ 71 (208)
+++|||+++.+..++ .++++++|+|++|++|++++|+++..|++|++++ ++++.+.++ ++|++.++++
T Consensus 128 ~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~ 205 (339)
T cd08249 128 GLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDY 205 (339)
T ss_pred HHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEEC
Confidence 578999998776655 7899999999999999999999999999999988 668888897 8999999998
Q ss_pred CCCccHHHHHHhHCCCCccEEEeCCCc-hhHHHHHHhhcc--CCEEEEEecccccCCCCCCCccchHHHhhcceeEEE--
Q 028523 72 KEEPDLDAALKRYFPEGINIYFENVGG-KMLDAVLLNMRI--QGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG-- 146 (208)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 146 (208)
++. ++.+.+++..++++|+++|++|+ ..+..+++++++ +|+++.+|...... .+..+..+..
T Consensus 206 ~~~-~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~ 272 (339)
T cd08249 206 HDP-DVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVL 272 (339)
T ss_pred CCc-hHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEE
Confidence 876 78888877766689999999997 899999999999 99999998754311 0111222222
Q ss_pred -eecc----ccccchHHHHHHHHHHHHCCCceeeeeeeec--CCcHHHHHHHHhcCC-ccceEEEEe
Q 028523 147 -FLVP----DYFHLYPKFLEMMIPRIKEGKIVYVEDKAEG--LESAPAALVGLFSGR-NVGKQVVEV 205 (208)
Q Consensus 147 -~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~gk~vv~~ 205 (208)
.... ..+......+..+.+++.++.+.+....+++ ++++.+|++.+.+++ ..+|+|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 273 GYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred eeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1111 1123334567889999999999987666777 999999999999998 889999874
No 74
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.90 E-value=1.1e-21 Score=149.74 Aligned_cols=194 Identities=22% Similarity=0.338 Sum_probs=156.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++ +.+.+++|++++|+++++++|++++|+++.+|++|+++++++++.+.++ ++|++.++++.+. ++...+
T Consensus 105 ~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i 181 (303)
T cd08251 105 VFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEEEI 181 (303)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHH
Confidence 467899998 5789999999999999999999999999999999999999999999997 8999999988776 777788
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----ccch
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLY 156 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 156 (208)
...+++ ++|.++|++++......+++++++|+++.+|..... ....... ..+.+++.+....+... +...
T Consensus 182 ~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (303)
T cd08251 182 MRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALK----SAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFI 256 (303)
T ss_pred HHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCC----ccCccCh-hHhhcCceEEEEehHHhhhhCHHHH
Confidence 877776 899999999988888999999999999999865421 1111111 23444555544443222 2334
Q ss_pred HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
.+.+.++.+++.+|.+++...+.++++++.++++.+.++...+|+++
T Consensus 257 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 257 ADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 56788899999999998877788999999999999999888888874
No 75
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.90 E-value=5.6e-22 Score=154.13 Aligned_cols=179 Identities=17% Similarity=0.169 Sum_probs=134.6
Q ss_pred chhhHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH
Q 028523 2 PGMTAYAGFFEV--CSPKQGEYVFVSAASGAVGQLVGQFAKL-VGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL 77 (208)
Q Consensus 2 ~~~tA~~~l~~~--~~~~~g~~vli~ga~g~vG~~a~qla~~-~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 77 (208)
+++|||+++... +.+++|++|+|+|+ |++|++++|+++. .|+ +|+++++++++++.++ +++.+..++ ++
T Consensus 145 ~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-----~~ 217 (341)
T cd08237 145 LVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-----DI 217 (341)
T ss_pred hHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-----hh
Confidence 457889988643 45688999999995 9999999999986 554 8999999999999988 666543221 11
Q ss_pred HHHHHhHCCC-CccEEEeCCCc----hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc
Q 028523 78 DAALKRYFPE-GINIYFENVGG----KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY 152 (208)
Q Consensus 78 ~~~~~~~~~~-~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (208)
. .. ++|++||++|+ ..+..++++++++|+++.+|...+ ....+...++.+++++.|+....
T Consensus 218 ~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~~- 283 (341)
T cd08237 218 P-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGSSRST- 283 (341)
T ss_pred h-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEecccC-
Confidence 1 12 69999999994 368899999999999999997432 12344556778999999876533
Q ss_pred ccchHHHHHHHHHHHHCC-----CceeeeeeeecCCcH---HHHHHHHhcCCccceEEEEec
Q 028523 153 FHLYPKFLEMMIPRIKEG-----KIVYVEDKAEGLESA---PAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~---~~a~~~~~~~~~~gk~vv~~~ 206 (208)
.+.++++++++.+| .+++.++++|+++++ .++++.+.++ ..||+||.++
T Consensus 284 ----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 284 ----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred ----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 45678899999998 567778889998655 5555544444 6799999875
No 76
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.90 E-value=2.7e-21 Score=150.05 Aligned_cols=192 Identities=28% Similarity=0.390 Sum_probs=160.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++.+.+.+.++++++|+|+++++|++++++++..|++++++++++++.+.++ .++.+.+++..+. +....+
T Consensus 150 ~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 227 (342)
T cd08266 150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKE-DFVREV 227 (342)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCCh-HHHHHH
Confidence 45789999888889999999999999999999999999999999999999999988887 7888777777655 566666
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.+...+ ++|+++++.|...+...+++++++|+++.++..... .........+.+++++.+..... ...+
T Consensus 228 ~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 297 (342)
T cd08266 228 RELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT-----KAEL 297 (342)
T ss_pred HHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC-----HHHH
Confidence 666655 899999999988899999999999999999876531 11233345577888888777544 4568
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.++++++.++.+.+.+...++++++.++++.+.++...+|+++++
T Consensus 298 ~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 298 DEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred HHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 889999999999888888899999999999999888889999863
No 77
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.90 E-value=1.7e-21 Score=153.87 Aligned_cols=191 Identities=20% Similarity=0.264 Sum_probs=153.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++ +.+++.+|++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.++ +++...++++.+.+++...
T Consensus 169 ~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~ 245 (386)
T cd08283 169 ILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMAR-SHLGAETINFEEVDDVVEA 245 (386)
T ss_pred chhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCcEEEcCCcchHHHHH
Confidence 468999999 778999999999997 59999999999999998 6999999999999999 6744467777664137777
Q ss_pred HHhHCCC-CccEEEeCCCch----------------------hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH
Q 028523 81 LKRYFPE-GINIYFENVGGK----------------------MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL 137 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~~----------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 137 (208)
+.+.+++ ++|++||++|++ .+..++++++++|+++.+|.... ..........
T Consensus 246 l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~~ 320 (386)
T cd08283 246 LRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGG-----TVNKFPIGAA 320 (386)
T ss_pred HHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCC-----CcCccCHHHH
Confidence 8887776 899999999743 57889999999999999987542 1122334456
Q ss_pred hhcceeEEEeeccccccchHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCC-ccceEEEEe
Q 028523 138 ISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGR-NVGKQVVEV 205 (208)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~ 205 (208)
+.+++++.+.... ..+.+.++++++.++.+.+. +.++++++++.+|++.+.++. ..+|+||++
T Consensus 321 ~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 321 MNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 7888888876532 25678889999999999863 567899999999999998887 568999863
No 78
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.90 E-value=1.1e-21 Score=152.87 Aligned_cols=190 Identities=22% Similarity=0.236 Sum_probs=152.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++ ...++++|++|+|.| +|++|++++|+|+.+|. +++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 152 ~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~ 227 (347)
T cd05278 152 ILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIINPKNG-DIVEQ 227 (347)
T ss_pred hhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCcc-hHHHH
Confidence 578999998 678899999999976 59999999999999997 8989888888888888 8999899998876 77777
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+++.+++ ++|++||++++ ..+..++++|+++|+++.+|..... .........+.+++++.+..... .+
T Consensus 228 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~ 297 (347)
T cd05278 228 ILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLTFKTGLVPV-----RA 297 (347)
T ss_pred HHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeEEEeeccCc-----hh
Confidence 8877765 89999999996 6889999999999999999864321 10011223346677776654322 56
Q ss_pred HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCc-cceEEEEe
Q 028523 159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRN-VGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 205 (208)
.++++++++.++.+++. +...++++++.++++.+..+.. .+|+|+++
T Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 298 RMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred HHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 78899999999999864 4577899999999999988876 68998763
No 79
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.90 E-value=2.1e-21 Score=151.14 Aligned_cols=189 Identities=22% Similarity=0.249 Sum_probs=153.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
++.|||+++.. .++++|++|+|+| +|++|++++|+|+..|++ |+++++++++.+.++ ++|.+.++++++. ++.+.
T Consensus 150 ~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~ 225 (343)
T cd08235 150 PLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE-DLVEK 225 (343)
T ss_pred HHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCCcc-CHHHH
Confidence 46789999965 4899999999997 699999999999999998 999998999999988 8999889998877 78888
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+..++ ++|+++||.++ ..+...+++++++|+++.++..... ............+++.+.+..... .+
T Consensus 226 i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~-----~~ 296 (343)
T cd08235 226 VRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITITGSYAAS-----PE 296 (343)
T ss_pred HHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEEEEEecCC-----hh
Confidence 8877766 79999999995 5888999999999999999875421 112223344555666666554332 45
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.++++++++.++.+.+ .+..+++++++.++++.+.+++ .+|+|++
T Consensus 297 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 297 DYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred hHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 6788899999999873 4567899999999999999999 8999874
No 80
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.89 E-value=1.6e-21 Score=152.17 Aligned_cols=186 Identities=21% Similarity=0.225 Sum_probs=149.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|+|+++ +.+++++|++|+| +|+|++|++++|+|+.+|+ .++++++++++.+.+. ++|++.++++.+. ++.+.
T Consensus 159 ~~~ta~~a~-~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~ 234 (350)
T cd08256 159 PLACALHAV-DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGADVVLNPPEV-DVVEK 234 (350)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCcEEecCCCc-CHHHH
Confidence 567999998 7789999999999 5569999999999999998 5677787888888787 8999889888766 78788
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHH-hhcceeEEEeeccccccchH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCL-ISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (208)
+.+.+++ ++|+++|++|+ ..+..++++++++|+++.+|.... ......... ..+++++.++... .
T Consensus 235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~i~~~~~~------~ 302 (350)
T cd08256 235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD------PVTVDWSIIGDRKELDVLGSHLG------P 302 (350)
T ss_pred HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC------CCccChhHhhcccccEEEEeccC------c
Confidence 8887776 89999999994 678899999999999999986431 111222222 2456666665543 2
Q ss_pred HHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 158 KFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
..+.++++++.+|.+++. +.++++++++.+|++.+++++..+|+|+
T Consensus 303 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 303 YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 357788999999999874 6788999999999999999888889874
No 81
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.89 E-value=1.6e-21 Score=151.20 Aligned_cols=187 Identities=27% Similarity=0.352 Sum_probs=150.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++.+. .+.++++++|+|++|++|++++|+++..|++++++++++++.+.++ ++ ++.+++++ ++.+.+
T Consensus 147 ~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~v 220 (334)
T PRK13771 147 VTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---KFSEEV 220 (334)
T ss_pred hHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---hHHHHH
Confidence 467899999776 8999999999999999999999999999999999999999999987 77 66666654 344455
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
++. +++|+++||+|+.....++++++++|+++.+|..... ..........+.+++++.+.... ..+.++
T Consensus 221 ~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 289 (334)
T PRK13771 221 KKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISA-----TKRDVE 289 (334)
T ss_pred Hhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCC-----CHHHHH
Confidence 544 2699999999988889999999999999999975421 11012233345677787776422 256788
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
++++++.++.+++.+.++++++++.+|++.+.++...+|+++.+
T Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 290 EALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 89999999999887788999999999999999988889999865
No 82
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.89 E-value=3.6e-21 Score=147.83 Aligned_cols=192 Identities=19% Similarity=0.159 Sum_probs=154.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++. .+++++|++++|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. ++...
T Consensus 114 ~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~ 189 (312)
T cd08269 114 PLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVER 189 (312)
T ss_pred hHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHH
Confidence 5678899885 78899999999997 699999999999999998 999998888888887 8999888887765 78888
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+.+++ ++|+++||.|+ .....++++|+++|+++.+|.... .....+......+++.+.++.... +....+
T Consensus 190 l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 263 (312)
T cd08269 190 VRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLE 263 (312)
T ss_pred HHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhh
Confidence 8887776 89999999985 678899999999999999986531 112233345566777776654332 223356
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCc-cceEEE
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRN-VGKQVV 203 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv 203 (208)
.++++++++.++.+.+ .+.++++++++.++++.+.+++. ..|+++
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 264 GMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 7899999999999987 35678999999999999999864 578876
No 83
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.89 E-value=3.5e-21 Score=148.32 Aligned_cols=197 Identities=28% Similarity=0.402 Sum_probs=162.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.+.+.+.++++++|+|+++++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++...+
T Consensus 123 ~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 200 (325)
T TIGR02824 123 TFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVV 200 (325)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHH
Confidence 46789999888899999999999999999999999999999999999999999888887 8998878777665 677777
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL 155 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 155 (208)
.+..++ ++|+++++.++..+..++++++++|+++.+|..... .. ..+....+.+++++.+...... +..
T Consensus 201 ~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (325)
T TIGR02824 201 KAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGR----KA-ELDLGPLLAKRLTITGSTLRARPVAEKAAI 275 (325)
T ss_pred HHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCC----cC-CCChHHHHhcCCEEEEEehhhcchhhhHHH
Confidence 777665 899999999988888999999999999999875421 11 2334445588999998876542 222
Q ss_pred hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
....+.++++++.++.+.+..+..++++++.++++.+.++...+|+++++
T Consensus 276 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 276 AAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 34556778899999998877778899999999999999888889999864
No 84
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.89 E-value=4.4e-21 Score=149.46 Aligned_cols=189 Identities=19% Similarity=0.151 Sum_probs=152.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++...+++.+|++++|.|+ |++|++++|+++.+| .+|+++++++++.+.++ ++|++.++++++. ++...
T Consensus 150 ~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~ 226 (345)
T cd08286 150 ILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSAKG-DAIEQ 226 (345)
T ss_pred hhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccccc-cHHHH
Confidence 46889988777888999999999875 999999999999999 69999888888888888 8999999998876 77777
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+.+++ ++|++||+++. +.+..+++.|+++|+++.+|.... ....+....+.+++++.+.... .+
T Consensus 227 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~ 294 (345)
T cd08286 227 VLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITTGLVD------TN 294 (345)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEeecCc------hh
Confidence 7777665 89999999984 688899999999999999986431 1223455557788888764332 24
Q ss_pred HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCC--ccceEEEEe
Q 028523 159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGR--NVGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~--~~gk~vv~~ 205 (208)
.++++.++++++.+.+. +.++++++++.++++.+.... ...|++|++
T Consensus 295 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 295 TTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred hHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 57888899999998753 568899999999999998764 345998864
No 85
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.89 E-value=3.9e-21 Score=147.83 Aligned_cols=195 Identities=30% Similarity=0.443 Sum_probs=159.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|+|+++.+.+.+.++++++|+|++|++|++++++++..|++++++++++++.+.++ ++|.+.++++... ++.+.+
T Consensus 123 ~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 200 (323)
T cd05276 123 VFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEV 200 (323)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHH
Confidence 46789999888888999999999999999999999999999999999999999999887 8998888887765 677777
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-----ccc
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-----FHL 155 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 155 (208)
.+...+ ++|+++|+.|+......+++++++|+++.++...... ........+.+++++.++..... +..
T Consensus 201 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (323)
T cd05276 201 KEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAAL 275 (323)
T ss_pred HHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHH
Confidence 776655 8999999999888889999999999999998754211 12233445568888888775442 222
Q ss_pred hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
....+.++++++.++.+.+..+..++++++.++++.+.++...+|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 276 AAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 345677788999999998777788999999999999998888888874
No 86
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.89 E-value=4.3e-21 Score=149.40 Aligned_cols=194 Identities=21% Similarity=0.291 Sum_probs=155.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++. .+.++++++|+|+| +|.+|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. . ..+
T Consensus 144 ~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~~-~-~~~ 218 (343)
T cd08236 144 PAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE-D-VEK 218 (343)
T ss_pred hHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCccc-c-HHH
Confidence 4679999995 78899999999997 599999999999999996 999998999999887 8999889988876 5 667
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+..++ ++|+++||.|+ ..+..++++|+++|+++.+|..... ...........+.+++++.++..........+
T Consensus 219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (343)
T cd08236 219 VRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSAPFPGD 295 (343)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeeccccccchh
Confidence 7777666 79999999984 6889999999999999999865421 01112233455678888888776443223456
Q ss_pred HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhc-CCccceEEE
Q 028523 159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFS-GRNVGKQVV 203 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv 203 (208)
.+.++++++.++.+. +.+..+++++++.++++.+.+ +...+|+|+
T Consensus 296 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 296 EWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 788899999999886 445678999999999999998 567788874
No 87
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.89 E-value=3.7e-21 Score=149.79 Aligned_cols=186 Identities=21% Similarity=0.283 Sum_probs=148.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccH---
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL--- 77 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~--- 77 (208)
++++||+++ ..+++++|++++|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++. ++
T Consensus 147 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~ 222 (343)
T cd05285 147 PLSVGVHAC-RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE-DTPES 222 (343)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-cchhH
Confidence 467888887 778999999999987 589999999999999997 899988899999888 8999999988765 43
Q ss_pred HHHHHhHCCC-CccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523 78 DAALKRYFPE-GINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL 155 (208)
Q Consensus 78 ~~~~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (208)
.+.+.+.+++ ++|++|||.|+. .+..++++++++|+++.+|.... . ...+......+++.+.++...
T Consensus 223 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~----- 291 (343)
T cd05285 223 AEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-----E-VTLPLSAASLREIDIRGVFRY----- 291 (343)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----C-CccCHHHHhhCCcEEEEeccC-----
Confidence 6667777666 799999999974 88999999999999999986432 1 122333455566666655432
Q ss_pred hHHHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCC-ccceEEE
Q 028523 156 YPKFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGR-NVGKQVV 203 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv 203 (208)
.+.++++++++.++.+. +.+.++++++++.++++.+.+++ ..+|++|
T Consensus 292 -~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 -ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred -hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 25678889999999875 34567899999999999999885 4589998
No 88
>PRK10083 putative oxidoreductase; Provisional
Probab=99.89 E-value=5.3e-21 Score=148.66 Aligned_cols=189 Identities=16% Similarity=0.144 Sum_probs=146.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKL-VGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~-~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 79 (208)
++.++|+++ ..+++++|++|+|+| +|++|++++|+++. +|++ ++++++++++.+.++ ++|++.++++++. ++.+
T Consensus 145 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~ 220 (339)
T PRK10083 145 PFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE-PLGE 220 (339)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHH
Confidence 456677544 668899999999999 69999999999997 5994 777888888888888 8999999988765 6666
Q ss_pred HHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 80 ALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
.+... +.++|++||++| ...+..++++++++|+++.+|.... ....+......+++++.+... ..+
T Consensus 221 ~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~ 287 (339)
T PRK10083 221 ALEEK-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSRL------NAN 287 (339)
T ss_pred HHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEec------Chh
Confidence 66431 115789999999 4689999999999999999987542 111233333456666665442 145
Q ss_pred HHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCC-ccceEEEEecC
Q 028523 159 FLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGR-NVGKQVVEVAT 207 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~ 207 (208)
.+.++++++.+|.+.+. ++++|+++++.+|++.+.++. ..+|+++++++
T Consensus 288 ~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 288 KFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 68889999999999873 678899999999999998654 56899998865
No 89
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.89 E-value=4.2e-21 Score=151.53 Aligned_cols=189 Identities=23% Similarity=0.260 Sum_probs=148.6
Q ss_pred chhhHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCC--ccH
Q 028523 2 PGMTAYAGFFEV-CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEE--PDL 77 (208)
Q Consensus 2 ~~~tA~~~l~~~-~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~--~~~ 77 (208)
+++|||+++... +++++|++|+|+| .|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++++. +++
T Consensus 186 ~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~ 263 (384)
T cd08265 186 PTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDCLS 263 (384)
T ss_pred HHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccccH
Confidence 467899998766 6899999999996 69999999999999999 7999998888888888 8999888887632 156
Q ss_pred HHHHHhHCCC-CccEEEeCCCc--hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccccc
Q 028523 78 DAALKRYFPE-GINIYFENVGG--KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFH 154 (208)
Q Consensus 78 ~~~~~~~~~~-~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (208)
...+.+.+++ ++|+++|+.|+ ..+..++++|+++|+++.+|.... ...........+..++.+.....
T Consensus 264 ~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~l~~~~~~~--- 334 (384)
T cd08265 264 GEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQVRRAQIVGAQGHS--- 334 (384)
T ss_pred HHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhhCceEEEEeeccC---
Confidence 7778888776 89999999995 377899999999999999986432 11122344445566666654321
Q ss_pred chHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 155 LYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
....+.++++++.++.+.+. +.++|+++++.+|++.+.++ ..+|+|+
T Consensus 335 -~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 335 -GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred -CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 13457889999999999864 56789999999999997665 5688886
No 90
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.89 E-value=4.7e-21 Score=149.22 Aligned_cols=187 Identities=20% Similarity=0.225 Sum_probs=151.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++.. +.+.+|++|+|+| +|++|++++|+++.+|+ +|+++++++++.+.++ ++|+. .+++++. ++...
T Consensus 152 ~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~~~~ 226 (344)
T cd08284 152 ILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PINFEDA-EPVER 226 (344)
T ss_pred chHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EEecCCc-CHHHH
Confidence 57899999955 7899999999997 69999999999999997 8999988888888888 89975 5666655 67777
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+.+++ ++|++||++++ ..+..++++++++|+++.+|..... .........+.+++++.+... ...+
T Consensus 227 l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~ 296 (344)
T cd08284 227 VREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFGRC-----PVRS 296 (344)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEecC-----Ccch
Confidence 8777765 89999999995 6889999999999999999976521 112334556777887764421 2356
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.++++++++.++.+.+ .+.++++++++.++++.+.+++. +|+|++
T Consensus 297 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 297 LFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred hHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 7889999999999876 35678999999999999998877 999985
No 91
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.89 E-value=1.2e-21 Score=148.32 Aligned_cols=169 Identities=18% Similarity=0.228 Sum_probs=133.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
++.|||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++.+ ..+.
T Consensus 105 ~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~---~~~~ 178 (280)
T TIGR03366 105 ATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELAL-SFGATALAEPEV---LAER 178 (280)
T ss_pred HHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCcEecCchh---hHHH
Confidence 45788999855 45669999999986 99999999999999995 888888999999998 999998887653 3445
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+++.+.+ ++|++||++|. ..+..++++++++|+++.+|..... .....+...++.+++++.|+.... .+
T Consensus 179 ~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~i~~~~~~~~~~~i~g~~~~~-----~~ 249 (280)
T TIGR03366 179 QGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVALDPEQVVRRWLTIRGVHNYE-----PR 249 (280)
T ss_pred HHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----CceeeCHHHHHhCCcEEEecCCCC-----HH
Confidence 5666655 89999999985 6789999999999999999975311 122345667788999999877543 45
Q ss_pred HHHHHHHHHHCC--Cce--eeeeeeecCCcH
Q 028523 159 FLEMMIPRIKEG--KIV--YVEDKAEGLESA 185 (208)
Q Consensus 159 ~~~~~~~~~~~g--~~~--~~~~~~~~~~~~ 185 (208)
.++++++++.++ .+. +.++++|+++++
T Consensus 250 ~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 250 HLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 688899999874 333 457888998864
No 92
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.89 E-value=2.9e-21 Score=150.00 Aligned_cols=183 Identities=23% Similarity=0.215 Sum_probs=149.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++... .+.+|++++|.| .|++|++++|+++..|++++++++++++.+.++ ++|++.+++.++. +...
T Consensus 154 ~~~ta~~~~~~~-~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~-- 227 (337)
T cd05283 154 AGITVYSPLKRN-GVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATKDP-EAMK-- 227 (337)
T ss_pred HHHHHHHHHHhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCcch-hhhh--
Confidence 467899998664 589999999976 699999999999999999999999999999998 8999888877653 3221
Q ss_pred HhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
. .++++|++|||+++. ....++++++++|+++.+|..... ...+...++.+++++.++.... .+.+
T Consensus 228 -~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~ 294 (337)
T cd05283 228 -K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG-----RKET 294 (337)
T ss_pred -h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC-----HHHH
Confidence 1 234799999999976 589999999999999999875421 1234455677899998877654 4668
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+.+++++.++.+.+.+ +.++++++.+|++.+.+++..||+|++
T Consensus 295 ~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 295 QEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 8899999999998764 679999999999999999999999874
No 93
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.89 E-value=6.1e-21 Score=148.40 Aligned_cols=188 Identities=21% Similarity=0.204 Sum_probs=144.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHH-
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDA- 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~- 79 (208)
+++|||+++ ..+++++|++|+|+| +|++|.+++|+++.+|++ +++++.++++.+.++ ++|++.++++++. +..+
T Consensus 146 ~~~~a~~~~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~ 221 (341)
T cd08262 146 PLAVGLHAV-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFAA 221 (341)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHHH
Confidence 467899986 778999999999997 599999999999999995 667777888888888 8999888887764 3222
Q ss_pred --HHHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523 80 --ALKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL 155 (208)
Q Consensus 80 --~~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (208)
.+.....+ ++|+++|+.|+ ..+..++++++++|+++.+|..... . .......+.+++++.+.....
T Consensus 222 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~---- 291 (341)
T cd08262 222 WAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES----D--NIEPALAIRKELTLQFSLGYT---- 291 (341)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----C--ccCHHHHhhcceEEEEEeccc----
Confidence 23334444 89999999997 5788999999999999999875321 1 111222244666665443322
Q ss_pred hHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 156 YPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.+.+.++++++.+|.+.+. +.+++++++++++++.+.+++..+|+|++
T Consensus 292 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 292 -PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred -HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 3467889999999999763 46789999999999999999988999974
No 94
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.89 E-value=4.5e-21 Score=145.37 Aligned_cols=195 Identities=21% Similarity=0.326 Sum_probs=157.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CCeeEecCCCccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG--FDEAFNYKEEPDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g--~~~v~~~~~~~~~~~ 79 (208)
++.|||+++.+.+.+++|++++|+|++|++|++++|+++..|++++++++++++.+.++ .+| ++.++++.+. ++.+
T Consensus 92 ~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 169 (293)
T cd05195 92 AYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SFAD 169 (293)
T ss_pred HHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hHHH
Confidence 45788999888889999999999999999999999999999999999999989999888 777 6778887765 6777
Q ss_pred HHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----cc
Q 028523 80 ALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FH 154 (208)
Q Consensus 80 ~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 154 (208)
++.+.+++ ++|.++|++++..+..++++++++|+++.+|.....+ .... ....+.+++.+....+... +.
T Consensus 170 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (293)
T cd05195 170 GILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILS----NSKL-GMRPFLRNVSFSSVDLDQLARERPE 244 (293)
T ss_pred HHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeecccccc----CCcc-chhhhccCCeEEEEeHHHHhhhChH
Confidence 88877766 8999999999889999999999999999998754311 0111 1233455666666554432 22
Q ss_pred chHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 155 LYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
...+.+.++.+++.++.+.+..+..++++++.++++.+..+...+|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 245 LLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 3345678899999999998888888999999999999998888788874
No 95
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.89 E-value=7e-21 Score=147.71 Aligned_cols=192 Identities=22% Similarity=0.248 Sum_probs=153.3
Q ss_pred chhhHHHHHHHhcCCCC-----CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCc
Q 028523 2 PGMTAYAGFFEVCSPKQ-----GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP 75 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~-----g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 75 (208)
+++|||+++.+.+.+.+ |++|+|+|++|++|++++|+++.+| ++|+++++++++.+.++ ++|++.++++.+
T Consensus 128 ~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-- 204 (336)
T cd08252 128 TSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ-- 204 (336)
T ss_pred HHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--
Confidence 46789999888888887 9999999999999999999999999 89999999999999998 899988888764
Q ss_pred cHHHHHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc--
Q 028523 76 DLDAALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-- 152 (208)
Q Consensus 76 ~~~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 152 (208)
++..++....++++|.++|+++ +..+..++++++++|+++.+|... ...+...++.+++++.+..+...
T Consensus 205 ~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (336)
T cd08252 205 DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSM 276 (336)
T ss_pred cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeecccc
Confidence 5666666544348999999999 478999999999999999998642 11223333467777777554321
Q ss_pred -----ccchHHHHHHHHHHHHCCCceeeee---eeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 153 -----FHLYPKFLEMMIPRIKEGKIVYVED---KAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 153 -----~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
+....+.+.++++++.+|.+.+.+. ..++++++.++++.+.++...+|++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 277 FQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred ccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 1133467888999999999987643 247999999999999999988999874
No 96
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.89 E-value=7.5e-21 Score=149.11 Aligned_cols=192 Identities=19% Similarity=0.263 Sum_probs=154.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++...+++.+|++|+|+| .|++|++++|+|+..|++ |+++++++++.+.++ ++|+++++++++. ++..+
T Consensus 166 ~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~ 242 (363)
T cd08279 166 GVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELAR-RFGATHTVNASED-DAVEA 242 (363)
T ss_pred hhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-HhCCeEEeCCCCc-cHHHH
Confidence 4688999988889999999999996 599999999999999995 999998999999887 8999889988876 77778
Q ss_pred HHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+...+ ++|+++|+++ +..+..++++++++|+++.+|.... ......+...+..++..+.+..... ....+
T Consensus 243 l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 316 (363)
T cd08279 243 VRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----GETVSLPALELFLSEKRLQGSLYGS--ANPRR 316 (363)
T ss_pred HHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----CcccccCHHHHhhcCcEEEEEEecC--cCcHH
Confidence 8877755 8999999999 5788999999999999999986541 1122334445555666666654432 12356
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEE
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQV 202 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v 202 (208)
.++++++++.++.+.+ .+.++++++++.+|++.+.+++..+.++
T Consensus 317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 7889999999999876 3667899999999999999888765554
No 97
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.89 E-value=8.2e-21 Score=146.10 Aligned_cols=196 Identities=29% Similarity=0.392 Sum_probs=161.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.+||+++.+.+.+.++++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|.+.+++..+. ++.+.+
T Consensus 123 ~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i 200 (323)
T cd08241 123 TYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERV 200 (323)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHH
Confidence 46788999877889999999999999999999999999999999999999999999998 8998888887765 777788
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----ccch
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----FHLY 156 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 156 (208)
.+.+++ ++|.++++.|+.....++++++++|+++.+|.... ..........+.+++++.+.....+ +...
T Consensus 201 ~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (323)
T cd08241 201 KALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASG-----EIPQIPANLLLLKNISVVGVYWGAYARREPELL 275 (323)
T ss_pred HHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCC-----CcCcCCHHHHhhcCcEEEEEecccccchhHHHH
Confidence 887776 89999999998888899999999999999986432 1111223345667888888776543 2223
Q ss_pred HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.+.+.++++++.++.+.+..+..++++++.++++.+.++...+|++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 276 RANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 467788999999999887777889999999999999988888898864
No 98
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.89 E-value=7.5e-21 Score=148.12 Aligned_cols=187 Identities=19% Similarity=0.252 Sum_probs=152.0
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++ ..+.+++|++++|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 153 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~~-~~~~~ 228 (345)
T cd08287 153 VMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIVAERGE-EAVAR 228 (345)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEecCCcc-cHHHH
Confidence 367889988 468899999999976 699999999999999995 788887777888888 8999999999876 77788
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+.+++ ++|.++|++|+ ..+..++++++++|+++.+|.... ....+....+.+++++.+.... ..+
T Consensus 229 i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~ 297 (345)
T cd08287 229 VRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNVGLAGGPAP-----VRR 297 (345)
T ss_pred HHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcceEEEEecCC-----cHH
Confidence 8887766 89999999984 688999999999999999886541 1223344567888888764322 256
Q ss_pred HHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 159 FLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.++++++++.+|.+++ .+.++++++++.++++.+.++... |++|+
T Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 298 YLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred HHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 7888999999999886 356789999999999998877654 99885
No 99
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.89 E-value=1.2e-20 Score=145.60 Aligned_cols=197 Identities=24% Similarity=0.355 Sum_probs=161.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++...+.+.++++++|+|+++++|++++++++..|++++++++++++.+.++ ++|.+.++++... .....+
T Consensus 128 ~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 205 (328)
T cd08268 128 QYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEV 205 (328)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHH
Confidence 46789999988889999999999999999999999999999999999999999999997 8998888887765 677777
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccchH
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHLYP 157 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 157 (208)
.+...+ ++|+++++.++.....++++++++|+++.+|.... .....+....+.+++++.+...... +....
T Consensus 206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (328)
T cd08268 206 LRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPEARR 280 (328)
T ss_pred HHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHHHHH
Confidence 776665 89999999998888999999999999999987542 1112333445788888887765432 33445
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
..+..+.+++.++.+.+.....++++++.++++.+..+...+|+++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 281 RAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 567777788888988877778899999999999999888888999863
No 100
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.88 E-value=6.2e-21 Score=144.44 Aligned_cols=195 Identities=22% Similarity=0.341 Sum_probs=155.1
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeEecCCCccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~ 79 (208)
++.|||+++...+.+.+|++|+|+|++|++|++++|+++..|++|+++++++++.+.++ ++|+ +.++++.+. ++.+
T Consensus 88 ~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~ 165 (288)
T smart00829 88 VFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFAD 165 (288)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cHHH
Confidence 45688999878889999999999999999999999999999999999999999999998 8998 678888776 7777
Q ss_pred HHHhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc---ccc
Q 028523 80 ALKRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY---FHL 155 (208)
Q Consensus 80 ~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 155 (208)
.+.+..++ ++|.++|++++.....++++++++|+++.+|..... ........ .+.+++++.+..+... +..
T Consensus 166 ~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T smart00829 166 EILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIR----DNSQLGMA-PFRRNVSYHAVDLDALEEGPDR 240 (288)
T ss_pred HHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCc----cccccchh-hhcCCceEEEEEHHHhhcChHH
Confidence 77777665 899999999988888999999999999999875321 01112222 2456667666554321 122
Q ss_pred hHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 156 YPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
..+.+..+.+++.++.+.+...+.++++++.++++.+..+...+|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 241 IRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred HHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 344577788999999888766678999999999999998887788764
No 101
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.88 E-value=1.2e-20 Score=145.79 Aligned_cols=194 Identities=21% Similarity=0.272 Sum_probs=149.9
Q ss_pred chhhHHHHHH--HhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523 2 PGMTAYAGFF--EVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD 78 (208)
Q Consensus 2 ~~~tA~~~l~--~~~~~~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 78 (208)
+++||+.++. +..... +|++++|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++++. .
T Consensus 127 ~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---~ 202 (324)
T cd08288 127 AGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL---S 202 (324)
T ss_pred HHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh---h
Confidence 3566776654 113444 6789999999999999999999999999999999999999997 8999999988643 2
Q ss_pred HHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc-ccchH
Q 028523 79 AALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY-FHLYP 157 (208)
Q Consensus 79 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 157 (208)
..+.....+++|.++|+++++.+...+..++.+|+++.+|..... ........++.+++++.+.+.... .....
T Consensus 203 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (324)
T cd08288 203 EPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA-----DLPTTVMPFILRGVTLLGIDSVMAPIERRR 277 (324)
T ss_pred HhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC-----CCCcchhhhhccccEEEEEEeecccchhhH
Confidence 245555555789999999987788888999999999999875321 111223344478888888764333 22345
Q ss_pred HHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.+..+.+++.++.+.+ +.+.++++++.++++.+.+++..+|+++++
T Consensus 278 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 278 AAWARLARDLDPALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHHHHHHHHhcCCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 67888888999998876 467899999999999999999999999864
No 102
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.88 E-value=1.1e-20 Score=148.81 Aligned_cols=193 Identities=21% Similarity=0.237 Sum_probs=150.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++ ..+++.+|++|+|.| .|++|++++|+++..|+ +|+++++++++.+.++ ++|+ ..+++++. ++.+.
T Consensus 161 ~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~-~~g~-~~v~~~~~-~~~~~ 235 (375)
T cd08282 161 IFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAE-SIGA-IPIDFSDG-DPVEQ 235 (375)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC-eEeccCcc-cHHHH
Confidence 468999999 778999999999976 59999999999999998 8999988888998888 8998 45677665 77777
Q ss_pred HHhHCCCCccEEEeCCCch------------hHHHHHHhhccCCEEEEEecccccCCCC-------CCCccchHHHhhcc
Q 028523 81 LKRYFPEGINIYFENVGGK------------MLDAVLLNMRIQGRITLCGMISQYNNDK-------PEGVHNLTCLISKR 141 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~~~~~~~~~~~~~ 141 (208)
+.+.+++++|+++||+|++ .+..++++++++|+++.+|.....+... .....+...++.++
T Consensus 236 i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (375)
T cd08282 236 ILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKG 315 (375)
T ss_pred HHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcC
Confidence 7777666799999999975 3889999999999998887643211000 01223344455556
Q ss_pred eeEEEeeccccccchHHHHHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 142 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
..+.+.... ..+.+.++++++.++.+++. +.+++++++++++++.+.++. .+|+|+++
T Consensus 316 ~~~~~~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 316 LSFGTGQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred cEEEEecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 555543321 25568889999999999873 778999999999999999988 88999863
No 103
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.88 E-value=1.6e-20 Score=147.29 Aligned_cols=192 Identities=18% Similarity=0.210 Sum_probs=150.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~ 79 (208)
+++|||+++...+++++|++|||+| +|++|++++|+|+.+|++ ++++++++++.+.++ ++|+++++++++.+ ++.+
T Consensus 167 ~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~ 244 (365)
T cd05279 167 GFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK-QLGATECINPRDQDKPIVE 244 (365)
T ss_pred chhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCeecccccccchHHH
Confidence 5789999988888999999999996 599999999999999995 777777999999997 89998888876531 4556
Q ss_pred HHHhHCCCCccEEEeCCC-chhHHHHHHhhc-cCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVG-GKMLDAVLLNMR-IQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+.+.+++++|+++|++| ...+..++++++ ++|+++.+|.... ......+...+ .++.++.|.....+. ..
T Consensus 245 ~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~~~~~~~~~~~-~~~~~l~g~~~~~~~--~~ 317 (365)
T cd05279 245 VLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----GTEATLDPNDL-LTGRTIKGTVFGGWK--SK 317 (365)
T ss_pred HHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----CCceeeCHHHH-hcCCeEEEEeccCCc--hH
Confidence 677766568999999998 478899999999 9999999987531 11222333344 566777776554332 24
Q ss_pred HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
+.+.++++++.++.+.+ .+.++++++++.+|++.+.+++.. |+++
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 56888999999999875 367889999999999999877654 6655
No 104
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.88 E-value=1.9e-20 Score=144.97 Aligned_cols=186 Identities=30% Similarity=0.390 Sum_probs=148.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++.. +.+.++++++|+|++|++|++++++++..|++|+++++++++.+.+. ++|.+.+++.. ++.+.+
T Consensus 147 ~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~ 221 (332)
T cd08259 147 VVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS---KFSEDV 221 (332)
T ss_pred HHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH---HHHHHH
Confidence 56789999977 88999999999999999999999999999999999998988888887 88887777543 244445
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
.+.. ++|++++++|......++++++++|+++.++..... . ..........++..+.+.... ..+.++
T Consensus 222 ~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 289 (332)
T cd08259 222 KKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD----P-APLRPGLLILKEIRIIGSISA-----TKADVE 289 (332)
T ss_pred Hhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC----C-cCCCHHHHHhCCcEEEEecCC-----CHHHHH
Confidence 4433 699999999988889999999999999999875421 1 111222333466666655321 256788
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
++.+++.+|.+++.+.++++++++.++++.+.++...+|+|++
T Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 290 EALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 8999999999988888899999999999999999888999874
No 105
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.88 E-value=4.6e-21 Score=129.03 Aligned_cols=127 Identities=25% Similarity=0.438 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC-CccEEEeCCC-chhHHHHHHh
Q 028523 30 AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVG-GKMLDAVLLN 107 (208)
Q Consensus 30 ~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~ 107 (208)
++|++++|+|++.|++|+++++++++.+.++ ++|++.++++++. ++.+++++.+++ ++|++|||+| .+.++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 6899999999999999999999999999999 9999999999988 899999999998 9999999999 7899999999
Q ss_pred hccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHHHHHHHHH
Q 028523 108 MRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEMMIPRIK 168 (208)
Q Consensus 108 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (208)
++++|+++.+|...+ .....+...++.+++++.++...+ .+.+++++++++
T Consensus 79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 999999999999762 345577888999999999999876 566666666664
No 106
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.88 E-value=2.8e-20 Score=143.47 Aligned_cols=191 Identities=26% Similarity=0.375 Sum_probs=155.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.+||+++.+.+++++|++++|+|+++++|++++++++..|++|++++++ ++.+.++ ++|.+.+++... .+...+
T Consensus 128 ~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~ 203 (326)
T cd08272 128 VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYV 203 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHH
Confidence 467899998888999999999999999999999999999999999999987 8888887 899888887654 266677
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccc--c----cc
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD--Y----FH 154 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~ 154 (208)
...+.+ ++|.++|+.++.....++++++++|+++.++.... ........+++++.+..... . +.
T Consensus 204 ~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T cd08272 204 AEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRA 274 (326)
T ss_pred HHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchh
Confidence 777766 89999999998888889999999999999876420 11122235677777665432 1 33
Q ss_pred chHHHHHHHHHHHHCCCceeeee-eeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 155 LYPKFLEMMIPRIKEGKIVYVED-KAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 155 ~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
...+.+..+++++.++.+.+.++ +.++++++.++++.+.++...+|+++++
T Consensus 275 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 275 HHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred hHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 34567888999999999987755 8899999999999999888889999864
No 107
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.87 E-value=4e-20 Score=143.88 Aligned_cols=188 Identities=21% Similarity=0.267 Sum_probs=146.2
Q ss_pred hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+.++++++.. ...+|++|+|.| .|++|++++|+++.+|+ +|++++.++++.+.++ ++|++.++++++. ++.+.+
T Consensus 150 ~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~~~~ 224 (341)
T PRK05396 150 FGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE-DLRDVM 224 (341)
T ss_pred HHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHHHH
Confidence 3445554432 346899999977 59999999999999999 6888888888888888 8999999988876 788888
Q ss_pred HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
.+.+.+ ++|++|||.|+ ..+..++++++++|+++.+|..+. . ..........+++++.++.... ..+.
T Consensus 225 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~l~~~~~~~----~~~~ 294 (341)
T PRK05396 225 AELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-----D-MAIDWNKVIFKGLTIKGIYGRE----MFET 294 (341)
T ss_pred HHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-CcccHHHHhhcceEEEEEEccC----ccch
Confidence 877765 89999999884 678999999999999999987542 1 1122355666777777764322 1234
Q ss_pred HHHHHHHHHCC-CceeeeeeeecCCcHHHHHHHHhcCCccceEEEEec
Q 028523 160 LEMMIPRIKEG-KIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 206 (208)
Q Consensus 160 ~~~~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 206 (208)
+..+.+++.++ .+.+.+.++++++++.++++.+.++. .||+|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 295 WYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred HHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 55678888888 45556778899999999999998877 799999864
No 108
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.87 E-value=4.3e-20 Score=143.66 Aligned_cols=189 Identities=22% Similarity=0.269 Sum_probs=147.1
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
++.+||+++ .....+|++++|.| +|++|++++|+++.+|++ |+++.+++++.+.++ ++|++.++++.+. ++.+.
T Consensus 147 ~~~~a~~~~--~~~~~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~ 221 (340)
T TIGR00692 147 PLGNAVHTV--LAGPISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-DVVKE 221 (340)
T ss_pred hHHHHHHHH--HccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-CHHHH
Confidence 456778776 34578999999976 599999999999999996 888877888888888 8999888888776 78888
Q ss_pred HHhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHH
Q 028523 81 LKRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 81 ~~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
+.+..++ ++|+++||.|+ ..+...+++|+++|+++.+|..... .... .....+.+++++.+.... ...+
T Consensus 222 l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~-~~~~~~~~~~~~~~~~~~----~~~~ 292 (340)
T TIGR00692 222 VADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK----VTID-FTNKVIFKGLTIYGITGR----HMFE 292 (340)
T ss_pred HHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC----cccc-hhhhhhhcceEEEEEecC----Cchh
Confidence 8777665 89999999884 6788999999999999999875321 1111 122445566666654421 2235
Q ss_pred HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.+.++++++.+|.++ +.+.+.++++++.++++.+.++.. ||+|+++
T Consensus 293 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 293 TWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred hHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 577899999999987 446788999999999999998875 9999874
No 109
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.87 E-value=7.9e-20 Score=143.73 Aligned_cols=194 Identities=18% Similarity=0.166 Sum_probs=147.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCc-cHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEP-DLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~-~~~~ 79 (208)
+++|||+++...+++++|++|+|+| +|++|++++|+++..|+ +|+++++++++.+.++ ++|++.++++.+.. +...
T Consensus 174 ~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~ 251 (373)
T cd08299 174 GFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK-ELGATECINPQDYKKPIQE 251 (373)
T ss_pred chHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCceEecccccchhHHH
Confidence 5789999987888999999999997 59999999999999999 8999999999999998 89999998876541 2666
Q ss_pred HHHhHCCCCccEEEeCCCc-hhHHHHHHhh-ccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPEGINIYFENVGG-KMLDAVLLNM-RIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+.+.+++++|.++||+|+ ..+..++..+ +++|+++.+|..... ........ .+.++.++.++....+.+ .
T Consensus 252 ~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~-~~~~~~~i~~~~~~~~~~--~ 324 (373)
T cd08299 252 VLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINPM-LLLTGRTWKGAVFGGWKS--K 324 (373)
T ss_pred HHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCHH-HHhcCCeEEEEEecCCcc--H
Confidence 6666665689999999995 6777766655 579999999975421 11122222 244677888877654321 3
Q ss_pred HHHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
..+.++++.+.++.++ +.++++|+++++.+|++.+.+++. .|+++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 325 DSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred HHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 4455666777776544 446788999999999999887765 4777753
No 110
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.87 E-value=7e-20 Score=142.38 Aligned_cols=184 Identities=21% Similarity=0.282 Sum_probs=144.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++.+...+ ++++|||.| +|++|++++|+|+.+|+ +++++++++++.+.++ ++|.+.++++++. .+
T Consensus 150 ~~~~a~~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~-~~--- 222 (339)
T cd08232 150 PLAVALHAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD-PL--- 222 (339)
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-hh---
Confidence 567899999776666 999999977 59999999999999999 8999998888888777 8999889988754 32
Q ss_pred HHhHC-C-CCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 81 LKRYF-P-EGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 81 ~~~~~-~-~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+.. . +++|+++|+.++ ..+...+++|+++|+++.+|..+. .........+.+++++.+... ..
T Consensus 223 -~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~------~~ 289 (339)
T cd08232 223 -AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELDLRGSFR------FD 289 (339)
T ss_pred -hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceEEEEEec------CH
Confidence 2222 2 269999999994 678999999999999999986431 112233344567777766542 14
Q ss_pred HHHHHHHHHHHCCCcee--eeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 158 KFLEMMIPRIKEGKIVY--VEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 158 ~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.++++++++.+|.+++ .+.++++++++.++++.+.++...||+|+++
T Consensus 290 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 290 DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 46788899999998864 3567899999999999999888889999864
No 111
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.87 E-value=3.3e-20 Score=144.96 Aligned_cols=201 Identities=21% Similarity=0.198 Sum_probs=142.4
Q ss_pred chhhHHHHHHHhc-CCCCCCEEEEecCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCcc--
Q 028523 2 PGMTAYAGFFEVC-SPKQGEYVFVSAASGAVGQLVGQFAKLV-GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD-- 76 (208)
Q Consensus 2 ~~~tA~~~l~~~~-~~~~g~~vli~ga~g~vG~~a~qla~~~-g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-- 76 (208)
++.|||+++...+ ++++|++++|+|+++++|++++|+|+.. +. +++++. ++++.+.++ ++|++.++++++. +
T Consensus 134 ~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~ 210 (352)
T cd08247 134 VLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGV 210 (352)
T ss_pred HHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-ccc
Confidence 4578999998877 8999999999999999999999999987 55 677776 566667776 8999889988765 4
Q ss_pred -HHHH-HHhHC-CCCccEEEeCCCc-hhHHHHHHhhc---cCCEEEEEecccccCCCCCCC-----ccchHHHhhcceeE
Q 028523 77 -LDAA-LKRYF-PEGINIYFENVGG-KMLDAVLLNMR---IQGRITLCGMISQYNNDKPEG-----VHNLTCLISKRIRM 144 (208)
Q Consensus 77 -~~~~-~~~~~-~~~~d~v~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 144 (208)
+..+ ++..+ ++++|.+|||.|+ .....++++++ ++|+++.++.....+...... .......+.+++++
T Consensus 211 ~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (352)
T cd08247 211 KLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGL 290 (352)
T ss_pred chHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcC
Confidence 4444 44444 3389999999997 68889999999 999999875322110000000 00001112223222
Q ss_pred EEeecccc-ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 145 EGFLVPDY-FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 145 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
........ .....+.+.++++++.++.+.+.+.+++++++++++++.+++++..||+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 291 WSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred CCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 22211110 00113568889999999999888778899999999999999998889999864
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.86 E-value=1.7e-19 Score=139.09 Aligned_cols=192 Identities=21% Similarity=0.322 Sum_probs=153.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.+.+.+.+|++++|+|+++++|++++++++..|++|+++. ++++.+.+. .+|++.+++.... ++...+
T Consensus 125 ~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 201 (325)
T cd08271 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERI 201 (325)
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHH
Confidence 4678999998888999999999999989999999999999999999888 777888887 8999888887765 677777
Q ss_pred HhHCCC-CccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeecccc----c---
Q 028523 82 KRYFPE-GINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDY----F--- 153 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--- 153 (208)
.+...+ ++|.++++.++.....++++++++|+++.++..... . ....+..++.+....+... +
T Consensus 202 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (325)
T cd08271 202 KEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDA-----S----PDPPFTRALSVHEVALGAAHDHGDPAA 272 (325)
T ss_pred HHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCC-----c----chhHHhhcceEEEEEecccccccchhh
Confidence 777666 899999999987778899999999999998764321 0 1122344444444433221 1
Q ss_pred -cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 154 -HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 154 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
....+.+.++++++.++.+.+...+.++++++.++++.+.++...+|+++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 273 WQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 2345667889999999999887678899999999999999888889999864
No 113
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.86 E-value=1.6e-19 Score=140.04 Aligned_cols=186 Identities=27% Similarity=0.363 Sum_probs=146.9
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++++++++ ..+++.+|++|+|+| .|.+|++++|+|+..|++ |+++++++++.+.++ ++|.+.++++.+. +....
T Consensus 144 ~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~ 219 (334)
T cd08234 144 PLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE-DPEAQ 219 (334)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-CHHHH
Confidence 456888888 778999999999997 599999999999999997 888998999999997 8998888888765 55444
Q ss_pred HHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHH
Q 028523 81 LKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKF 159 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (208)
+...++++|+++|+.+ ...+..++++|+++|+++.+|..... ..........+.+++++.+.... .+.
T Consensus 220 -~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~ 288 (334)
T cd08234 220 -KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFIN------PYT 288 (334)
T ss_pred -HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEeccC------HHH
Confidence 3333348999999998 46888999999999999999875421 11223334444567777766532 456
Q ss_pred HHHHHHHHHCCCceee--eeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 160 LEMMIPRIKEGKIVYV--EDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 160 ~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
++++++++.++.+.+. +..+++++++.++++.+.+ ...+|+|+
T Consensus 289 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 289 FPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 7889999999998753 5678999999999999998 77789886
No 114
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.86 E-value=9.5e-20 Score=141.77 Aligned_cols=186 Identities=24% Similarity=0.295 Sum_probs=144.9
Q ss_pred hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+.++|+++. ...++|++|+|.| .|++|++++|+++..|. +|+++++++++.+.++ ++|.+.++++++. ++. .+
T Consensus 150 ~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~-~~ 223 (341)
T cd05281 150 LGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE-DVV-EV 223 (341)
T ss_pred HHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc-cHH-HH
Confidence 456777763 4567899999977 59999999999999999 7999988888888888 8999888888765 677 77
Q ss_pred HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccc-hHHHhhcceeEEEeeccccccchHH
Q 028523 82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN-LTCLISKRIRMEGFLVPDYFHLYPK 158 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (208)
.+..++ ++|++||++|+ .....++++|+++|+++.+|.... . .... ......+++.+.+..... ..+
T Consensus 224 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~----~~~ 293 (341)
T cd05281 224 KSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-----P-VDIDLNNLVIFKGLTVQGITGRK----MFE 293 (341)
T ss_pred HHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----C-cccccchhhhccceEEEEEecCC----cch
Confidence 777776 89999999985 678899999999999999986542 1 1111 123455666666654321 234
Q ss_pred HHHHHHHHHHCCCce--eeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 159 FLEMMIPRIKEGKIV--YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 159 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
.+.++.+++.+|.+. +.+..+++++++.++++.+.++. .||+|+++
T Consensus 294 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 294 TWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred hHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 577888999999886 34566789999999999999998 89999864
No 115
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.86 E-value=8e-20 Score=141.48 Aligned_cols=194 Identities=24% Similarity=0.290 Sum_probs=145.1
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++...+.+.+|++++|+|++|++|++++|+++..|++|++++. +++.+.++ ++|+.. +++... ++...
T Consensus 123 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~- 197 (331)
T cd08273 123 NYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLPA- 197 (331)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh-
Confidence 46789999988889999999999999999999999999999999999996 88888887 899643 455443 44433
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccch------------HHHhhcceeEEEeec
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNL------------TCLISKRIRMEGFLV 149 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 149 (208)
...++++|.++|++++..+..++++++++|+++.+|.....+.. ...... ...+.+++++.....
T Consensus 198 -~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (331)
T cd08273 198 -MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWR 274 (331)
T ss_pred -hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeech
Confidence 23334799999999987799999999999999999876532110 000000 011222333333322
Q ss_pred ccc--ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 150 PDY--FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 150 ~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
... +....+.+.++++++.+|.+.+.+.++++++++.++++.+.++...||+|+
T Consensus 275 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 275 DRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred hcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 110 233457889999999999998877788999999999999998888889886
No 116
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.86 E-value=2.3e-19 Score=139.10 Aligned_cols=201 Identities=28% Similarity=0.402 Sum_probs=155.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAA 80 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 80 (208)
+++|||+++...+.+++|++|+|+|++|++|++++++++.. +..++... .+++.+.++ .+|.+.++++.+. ++...
T Consensus 122 ~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~ 198 (337)
T cd08275 122 NYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEE 198 (337)
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHH
Confidence 56789999988899999999999999999999999999998 43443332 455777887 8999888888776 77777
Q ss_pred HHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCC-----------CCccchHHHhhcceeEEEeec
Q 028523 81 LKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP-----------EGVHNLTCLISKRIRMEGFLV 149 (208)
Q Consensus 81 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 149 (208)
++..+++++|+++|++|+.....++++++++|+++.+|.....+.... .........+.+++++.++..
T Consensus 199 ~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (337)
T cd08275 199 VKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNL 278 (337)
T ss_pred HHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeec
Confidence 877765589999999998888999999999999999987542110000 011122355678888888775
Q ss_pred ccc---ccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 150 PDY---FHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 150 ~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
... .......+.++.+++.++.+.+.....+++++++++++.+.++...+|+++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 279 GWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred hhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 432 11223467888899999999887778899999999999999988889999864
No 117
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.86 E-value=7.9e-20 Score=140.94 Aligned_cols=175 Identities=20% Similarity=0.217 Sum_probs=138.7
Q ss_pred hhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHh
Q 028523 4 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR 83 (208)
Q Consensus 4 ~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 83 (208)
.++|.++ +..++++|++|+|+| +|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++++.
T Consensus 142 ~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~--------- 209 (319)
T cd08242 142 AAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEAE--------- 209 (319)
T ss_pred HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCcccc---------
Confidence 3455555 678899999999997 699999999999999999999999999999999 7999887766431
Q ss_pred HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHHH
Q 028523 84 YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLEM 162 (208)
Q Consensus 84 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (208)
..+.++|+++||.|+ ..+..++++++++|+++..+.... ....+....+.++.++.+..... +++
T Consensus 210 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~--------~~~ 275 (319)
T cd08242 210 SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP--------FAP 275 (319)
T ss_pred ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc--------HHH
Confidence 122379999999985 678899999999999998665431 12234445566777777765432 677
Q ss_pred HHHHHHCCCc--eeeeeeeecCCcHHHHHHHHhcCCccceEEEEe
Q 028523 163 MIPRIKEGKI--VYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 205 (208)
Q Consensus 163 ~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 205 (208)
+.++++++.+ .+.+.++|+++++.+|++.+.++. .+|+||++
T Consensus 276 ~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 276 ALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 8899999998 455778999999999999998776 47998863
No 118
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.85 E-value=1.5e-19 Score=139.78 Aligned_cols=178 Identities=30% Similarity=0.350 Sum_probs=138.3
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++.. +++++|++++|+|++|++|++++++|+.+|++|+++++ .+.++ ++|+++++++++ ..+.+
T Consensus 147 ~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~~---~~~~l 217 (325)
T cd08264 147 AALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYDE---VEEKV 217 (325)
T ss_pred hhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecchH---HHHHH
Confidence 46789999855 88999999999999999999999999999999988873 36666 899988887653 34556
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
++.+ +++|+++|++|+..+..++++|+++|+++.+|.... .....+...++.++.++.+..... ++.++
T Consensus 218 ~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 286 (325)
T cd08264 218 KEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT-----RKELL 286 (325)
T ss_pred HHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC-----HHHHH
Confidence 6555 679999999998899999999999999999987421 112334455555666666654433 45677
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceE
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ 201 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~ 201 (208)
++++++.... ..+.++|+++++++|++.+.++...+|+
T Consensus 287 ~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 287 ELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 7888885443 4566789999999999999988777775
No 119
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.85 E-value=5.4e-19 Score=138.68 Aligned_cols=186 Identities=19% Similarity=0.250 Sum_probs=144.3
Q ss_pred hhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCCeeEecC--CCccHHH
Q 028523 3 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYK--EEPDLDA 79 (208)
Q Consensus 3 ~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g~~~v~~~~--~~~~~~~ 79 (208)
..++|+++ ...++.+|++|+|+| .|++|++++|+++..|++ ++++++++++.+.++ ++|++.++++. +. ++.+
T Consensus 167 ~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~ 242 (364)
T PLN02702 167 LSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIE-DVES 242 (364)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccc-cHHH
Confidence 34577777 668899999999997 599999999999999994 777777888888888 89998877654 23 5666
Q ss_pred HHHhH---CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccc
Q 028523 80 ALKRY---FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHL 155 (208)
Q Consensus 80 ~~~~~---~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (208)
++.+. .++++|++||++| ...+..++++++++|+++.+|.... . ..........+++++.+++..
T Consensus 243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~i~~~~~~----- 311 (364)
T PLN02702 243 EVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-----E-MTVPLTPAAAREVDVVGVFRY----- 311 (364)
T ss_pred HHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-----C-CcccHHHHHhCccEEEEeccC-----
Confidence 66544 2337999999999 5789999999999999999986432 1 122344566778888776542
Q ss_pred hHHHHHHHHHHHHCCCce--eeeeeeecC--CcHHHHHHHHhcCCccceEEEE
Q 028523 156 YPKFLEMMIPRIKEGKIV--YVEDKAEGL--ESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 156 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
...+..+++++.++.+. +.+.++|++ +++.+|++.+.+++..+|+|+.
T Consensus 312 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 312 -RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred -hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 24567889999999885 345677555 7999999999988888999985
No 120
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.85 E-value=1.1e-19 Score=141.72 Aligned_cols=198 Identities=26% Similarity=0.374 Sum_probs=141.6
Q ss_pred chhhHHHHHHHhcCCCC----CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH
Q 028523 2 PGMTAYAGFFEVCSPKQ----GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL 77 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~----g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 77 (208)
+++|||+++.+.+.+.+ |++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|.+.+++..+. ++
T Consensus 142 ~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~ 218 (350)
T cd08248 142 AGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DF 218 (350)
T ss_pred HHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hH
Confidence 46789999988777754 9999999999999999999999999999988855 5667777 8999888887664 55
Q ss_pred HHHHHhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCC-CC--Cccc-hHHHhhccee-EE-Eeec-c
Q 028523 78 DAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDK-PE--GVHN-LTCLISKRIR-ME-GFLV-P 150 (208)
Q Consensus 78 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~~-~~~~~~~~~~-~~-~~~~-~ 150 (208)
...+... +++|++||+.|++....++++++++|+++.+|..+..+... .. .... ...+...... +. .... .
T Consensus 219 ~~~l~~~--~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (350)
T cd08248 219 EEELTER--GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRW 296 (350)
T ss_pred HHHHHhc--CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeE
Confidence 5544432 37999999999888999999999999999998643210000 00 0000 0001111100 00 0000 0
Q ss_pred ccccchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEEE
Q 028523 151 DYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 204 (208)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 204 (208)
.........+.++++++.+|.+.+.+.+.++++++.++++.+.++...+|++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 297 GFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred EEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 001123567888999999999988878899999999999999988877888863
No 121
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.84 E-value=4.5e-19 Score=135.68 Aligned_cols=182 Identities=28% Similarity=0.426 Sum_probs=145.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.+||+++...+.+.+|++++|+|++|++|++++++++..|++|+++++++ +.+.++ ++|.+.++++... ++..
T Consensus 128 ~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~-- 202 (309)
T cd05289 128 AGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER-- 202 (309)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh--
Confidence 3578899998877899999999999999999999999999999999999777 778887 8998888877664 4433
Q ss_pred HhHCCCCccEEEeCCCchhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 82 KRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
...+.++|.+++++++.....++++++++|+++.+|.... . .. ..+.+++++....... . .+.+.
T Consensus 203 -~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~---~~--~~~~~~~~~~~~~~~~--~--~~~~~ 267 (309)
T cd05289 203 -AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPP-----A---EQ--AAKRRGVRAGFVFVEP--D--GEQLA 267 (309)
T ss_pred -ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCc-----c---hh--hhhhccceEEEEEecc--c--HHHHH
Confidence 2222379999999998888999999999999999987442 1 00 3344566665554421 1 56788
Q ss_pred HHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 162 MMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
++++++.++.+.+.+++.++++++.++++.+..+...+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 268 ELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred HHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 899999999998877889999999999999998887788774
No 122
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.84 E-value=9.1e-19 Score=135.64 Aligned_cols=183 Identities=27% Similarity=0.312 Sum_probs=144.5
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++.. .++.++++|+|+|+ |++|++++++++..|++|+++++++++.+.++ ++|++.++++.+. .....
T Consensus 147 ~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~- 221 (330)
T cd08245 147 AGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE-LDEQA- 221 (330)
T ss_pred hHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc-chHHh-
Confidence 46789999965 78999999999974 78999999999999999999999999999997 8998888876654 32222
Q ss_pred HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
..+++|+++|+.+ ......++++|+++|+++.++..... ....+...++.++.++.++.... ...+
T Consensus 222 ---~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 288 (330)
T cd08245 222 ---AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG-----RADL 288 (330)
T ss_pred ---ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC-----HHHH
Confidence 2237999999987 57888999999999999999865321 11122344556677776666533 4568
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
+++++++.++.+.+ ....++++++.++++.+.++...+|+|+
T Consensus 289 ~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 289 QEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 88899999999886 4467999999999999999988888875
No 123
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.84 E-value=6.3e-19 Score=136.46 Aligned_cols=177 Identities=22% Similarity=0.213 Sum_probs=139.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
+++|||+++ +.++++++++++|+| +|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++.
T Consensus 152 ~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~------- 221 (329)
T cd08298 152 AGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDDL------- 221 (329)
T ss_pred hhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCcc-------
Confidence 568999999 889999999999997 699999999999999999999999999999997 8999877766532
Q ss_pred HhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 82 KRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.+.++|.++++.+ +..+..++++++++|+++.+|.... .....+. ..+.++..+.+.... ..+.+
T Consensus 222 ---~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~-~~~~~~~~i~~~~~~-----~~~~~ 287 (329)
T cd08298 222 ---PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDY-ELLWGEKTIRSVANL-----TRQDG 287 (329)
T ss_pred ---CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccch-hhhhCceEEEEecCC-----CHHHH
Confidence 1237999999866 5789999999999999998875321 1111111 223445555544432 25567
Q ss_pred HHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 161 EMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
..+++++.++.+++. .++++++++.+|++.+.++...||+|+
T Consensus 288 ~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 288 EEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 889999999998874 578999999999999999988899874
No 124
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.83 E-value=1.5e-18 Score=133.55 Aligned_cols=188 Identities=30% Similarity=0.354 Sum_probs=137.8
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.+||+++.+...+.+|++++|+|++|++|++++++++..|++|++++++ ++.+.++ ++|.+.++++... ++.
T Consensus 127 ~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~--- 200 (319)
T cd08267 127 AGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV--- 200 (319)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---
Confidence 467899999888889999999999999999999999999999999999855 7888887 8999888877654 433
Q ss_pred HhHCCC-CccEEEeCCCch--hHHHHHHhhccCCEEEEEecccccCCCCCCCccc--hHHHhhcceeEEEeeccccccch
Q 028523 82 KRYFPE-GINIYFENVGGK--MLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHN--LTCLISKRIRMEGFLVPDYFHLY 156 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 156 (208)
...+.+ ++|++++|+++. .....+..++++|+++.+|...... ..... ..........+...... +.
T Consensus 201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 272 (319)
T cd08267 201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLTLGGGGRRLKFFLAK--PN-- 272 (319)
T ss_pred hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchhhccccceEEEEEec--CC--
Confidence 333344 899999999853 3333444499999999998754211 00000 01111111222222111 11
Q ss_pred HHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 157 PKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 157 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
.+.+.++++++.++.+.+.+.++++++++.++++.+.++...+|+++
T Consensus 273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 273 AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 66788899999999998888889999999999999998887788874
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.82 E-value=1.4e-18 Score=131.45 Aligned_cols=185 Identities=25% Similarity=0.265 Sum_probs=139.7
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcC-CCeeEecCCCccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKNKFG-FDEAFNYKEEPDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~~~g-~~~v~~~~~~~~~~~ 79 (208)
+++|||+++. .+++++|++++|+| .|++|++++|+|+.+|++ |+++++++++.+.++ ++| .+.++++.+.
T Consensus 82 ~~~ta~~~~~-~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~----- 153 (277)
T cd08255 82 LAATALNGVR-DAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD----- 153 (277)
T ss_pred HHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh-----
Confidence 4678999984 68999999999997 599999999999999998 999999999999888 888 4445443221
Q ss_pred HHHhHCCCCccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccc-----
Q 028523 80 ALKRYFPEGINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYF----- 153 (208)
Q Consensus 80 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 153 (208)
...+.++|.+||+++ +......+++++++|+++.+|..... .......+..+.+++.+.......
T Consensus 154 ---~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (277)
T cd08255 154 ---EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRP 224 (277)
T ss_pred ---hhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeeccccccccccc
Confidence 112237999999988 57888999999999999999876531 111122333455576666554320
Q ss_pred --cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCC-ccceEEE
Q 028523 154 --HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR-NVGKQVV 203 (208)
Q Consensus 154 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv 203 (208)
....+.+.++++++.++.+++.+.+.++++++.++++.+.++. ...|+++
T Consensus 225 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 225 RRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 1223578889999999999888778899999999999998873 4457653
No 126
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.80 E-value=1.3e-17 Score=127.88 Aligned_cols=155 Identities=26% Similarity=0.347 Sum_probs=126.6
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHhcCCCeeEecCCCccHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDA 79 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 79 (208)
+++|||+++...++++++++|+|.| +|++|++++|+|+..|++|++++ +++++.+.++ ++|++.+ ++.+. ++..
T Consensus 148 ~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~ 223 (306)
T cd08258 148 PLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGEE-DLAE 223 (306)
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCcC-CHHH
Confidence 4678999998889999999999976 69999999999999999988773 3444667777 8999878 77766 7888
Q ss_pred HHHhHCCC-CccEEEeCCC-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchH
Q 028523 80 ALKRYFPE-GINIYFENVG-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP 157 (208)
Q Consensus 80 ~~~~~~~~-~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (208)
.+....++ ++|+++|+.| +..+...+++|+++|+++.+|...+ ....++...++.+++++.|+++.+ .
T Consensus 224 ~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~ 293 (306)
T cd08258 224 LVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGSRSST-----P 293 (306)
T ss_pred HHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEEecCc-----h
Confidence 88777765 8999999997 4788899999999999999988652 123345566778999999999866 5
Q ss_pred HHHHHHHHHHHCC
Q 028523 158 KFLEMMIPRIKEG 170 (208)
Q Consensus 158 ~~~~~~~~~~~~g 170 (208)
+.++++++++++|
T Consensus 294 ~~~~~~~~~~~~~ 306 (306)
T cd08258 294 ASWETALRLLASG 306 (306)
T ss_pred HhHHHHHHHHhcC
Confidence 6688888888765
No 127
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.76 E-value=1.1e-16 Score=120.27 Aligned_cols=141 Identities=33% Similarity=0.471 Sum_probs=116.2
Q ss_pred chhhHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 2 PGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 2 ~~~tA~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
++.|||+++.....+.++++|+|+|+++ +|++++|+++..|.+|+++++++++.+.++ ++|.+.++++.+. +....+
T Consensus 118 ~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 194 (271)
T cd05188 118 PLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEEL 194 (271)
T ss_pred HHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-CHHHHH
Confidence 5789999998888779999999999866 999999999999999999999999999998 8898888887766 666655
Q ss_pred HhHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccc
Q 028523 82 KRYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPD 151 (208)
Q Consensus 82 ~~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (208)
. ...+ ++|++++++++ ......+++++++|+++.++..... .........+.+++++.++....
T Consensus 195 ~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 195 R-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred H-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC
Confidence 5 4444 89999999998 8889999999999999999876532 11122455678899998887654
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.75 E-value=2.6e-18 Score=115.08 Aligned_cols=122 Identities=28% Similarity=0.313 Sum_probs=81.6
Q ss_pred cCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC--chhH-HHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhh
Q 028523 63 FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG--GKML-DAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS 139 (208)
Q Consensus 63 ~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 139 (208)
||+++++||++. ++ ...+++|+|||++| ++.+ ..++++| ++|+++.++.. ........
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~-----------~~~~~~~~ 61 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD-----------LPSFARRL 61 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH-----------HHHHHHHH
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc-----------ccchhhhh
Confidence 689999999965 55 23448999999999 6544 7777888 99999998741 01111212
Q ss_pred cceeEEEeecccc-c-cchHHHHHHHHHHHHCCCceeeeeeeecCCcHHHHHHHHhcCCccceEEE
Q 028523 140 KRIRMEGFLVPDY-F-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVV 203 (208)
Q Consensus 140 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 203 (208)
....+........ + ....+.++++.+++++|+++|.+.++||++++.+|++.+++++..||+||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2222332232211 1 12356799999999999999999999999999999999999999999997
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.60 E-value=4.5e-14 Score=110.77 Aligned_cols=176 Identities=13% Similarity=0.077 Sum_probs=129.2
Q ss_pred hHHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHh
Q 028523 5 TAYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR 83 (208)
Q Consensus 5 tA~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 83 (208)
+.|.++.+..+ ..+|++|+|.|+ |++|+.+++.++.+|++|++++.++.+.+.++ .+|++.+ ...+.++
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-------~~~e~v~- 256 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-------TMEEAVK- 256 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-------cHHHHHc-
Confidence 34555555443 368999999995 99999999999999999999999999999888 8888432 1222221
Q ss_pred HCCCCccEEEeCCCc-hhHHHH-HHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHHH
Q 028523 84 YFPEGINIYFENVGG-KMLDAV-LLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFLE 161 (208)
Q Consensus 84 ~~~~~~d~v~d~~g~-~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (208)
++|+||+|+|. ..+... ++.++++|.++.+|.. ...++...+..+++++.++..... .-.++
T Consensus 257 ----~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~ 320 (413)
T cd00401 257 ----EGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELP 320 (413)
T ss_pred ----CCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcC
Confidence 48999999995 456665 9999999999999853 123566667778888877665321 00233
Q ss_pred --HHHHHHHCCCc---eeeeeee-----ecCC-cHHHHHHHHhcCCc-cceEEEEec
Q 028523 162 --MMIPRIKEGKI---VYVEDKA-----EGLE-SAPAALVGLFSGRN-VGKQVVEVA 206 (208)
Q Consensus 162 --~~~~~~~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gk~vv~~~ 206 (208)
+.+.++.+|.+ .+.+++. ++|+ ++.++++.+.++.. .-|+++.++
T Consensus 321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 68899999988 3445555 7888 99999999988764 357776553
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.56 E-value=2.5e-13 Score=109.16 Aligned_cols=149 Identities=11% Similarity=0.069 Sum_probs=107.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCc------------cHHHHHH
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEP------------DLDAALK 82 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~------------~~~~~~~ 82 (208)
..++++|+|+|+ |++|+++++.|+.+|++|++++.++++.+.++ ++|++. .++..+.. ++.+..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 457999999996 99999999999999999999999999999999 899984 35553310 2222222
Q ss_pred hH-CC--CCccEEEeCCCch------h-HHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhh-cceeEEEeeccc
Q 028523 83 RY-FP--EGINIYFENVGGK------M-LDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLIS-KRIRMEGFLVPD 151 (208)
Q Consensus 83 ~~-~~--~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 151 (208)
+. .+ +++|++|+|++.+ . .+.+++.+++||+++.++...+.+.+ ...+....+. +++++.|...
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n-- 314 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTD-- 314 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCC--
Confidence 22 33 2699999999842 3 48999999999999999986432211 1222334454 7888888663
Q ss_pred cccchHHHHHHHHHHHHCCCcee
Q 028523 152 YFHLYPKFLEMMIPRIKEGKIVY 174 (208)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~g~~~~ 174 (208)
++ .++..+..+++.++.+..
T Consensus 315 ~P---~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 315 LP---SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred Cc---hhHHHHHHHHHHhCCccH
Confidence 22 344556888888887754
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.96 E-value=1.1e-08 Score=82.63 Aligned_cols=107 Identities=19% Similarity=0.208 Sum_probs=81.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCC------------ccHHHHHHh
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEE------------PDLDAALKR 83 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~------------~~~~~~~~~ 83 (208)
.++++++|+|+ |.+|+++++.++.+|++|++.++++++++.++ ++|++. .++..+. +++.+...+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 35789999996 99999999999999999999999999999999 899865 3332210 022222222
Q ss_pred HCC---CCccEEEeCC---Cc--h--hHHHHHHhhccCCEEEEEecccccCC
Q 028523 84 YFP---EGINIYFENV---GG--K--MLDAVLLNMRIQGRITLCGMISQYNN 125 (208)
Q Consensus 84 ~~~---~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~~ 125 (208)
... .++|++|+|+ |. + ..+++.+.|++|+.++.++...+.+.
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~ 291 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNC 291 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCE
Confidence 222 2699999999 53 2 46788999999999999998776543
No 132
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.84 E-value=2.6e-08 Score=72.09 Aligned_cols=80 Identities=23% Similarity=0.404 Sum_probs=65.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeEecCCCccHHHHHHhHCCC--CccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPE--GINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~--~~d~ 91 (208)
+++.++|+|||+|+|.+.++.....|++|+.+.|+.++++.+..+++. ...+|.++.....+.+...... .+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 457899999999999999999999999999999999999999889983 2356777653444555554444 6999
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
.++..|
T Consensus 85 LvNNAG 90 (246)
T COG4221 85 LVNNAG 90 (246)
T ss_pred EEecCC
Confidence 999987
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.77 E-value=1.7e-07 Score=70.91 Aligned_cols=171 Identities=16% Similarity=0.219 Sum_probs=100.3
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCC
Q 028523 13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPE 87 (208)
Q Consensus 13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~ 87 (208)
.+.+++|++||.+|+ |+ |..+.++++..|. +|++++.+++..+.+++. +|...+ ..... ++.+ + ...++
T Consensus 72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCC
Confidence 356789999999984 55 8888888888765 799999999988887732 343322 11111 2211 1 12233
Q ss_pred CccEEEeCC------C-chhHHHHHHhhccCCEEEEEecccccCCCCCCCccchHHHhhcceeEEEeeccccccchHHHH
Q 028523 88 GINIYFENV------G-GKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYPKFL 160 (208)
Q Consensus 88 ~~d~v~d~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (208)
.||+|+... + ...+..+++.|+|||+++..+..... . .+ ..+.+...+.+....... ..
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-----~--~~--~~~~~~~~~~~~~~~~~~-----~~ 211 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-----E--LP--EEIRNDAELYAGCVAGAL-----QE 211 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-----C--CC--HHHHHhHHHHhccccCCC-----CH
Confidence 799998543 2 24789999999999999987664321 1 11 111122211111111111 12
Q ss_pred HHHHHHHHCCCce---eeeeeeecCCcHHHHHHHH--hcCCccceEEE
Q 028523 161 EMMIPRIKEGKIV---YVEDKAEGLESAPAALVGL--FSGRNVGKQVV 203 (208)
Q Consensus 161 ~~~~~~~~~g~~~---~~~~~~~~~~~~~~a~~~~--~~~~~~gk~vv 203 (208)
.++.+++.+..+. ......++++++.++++.+ ..+...++.+.
T Consensus 212 ~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 212 EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence 3344555553332 2334567899999999988 55555555554
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.75 E-value=2.3e-07 Score=73.58 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=77.8
Q ss_pred hHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHh
Q 028523 5 TAYAGFFEVCSPK-QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKR 83 (208)
Q Consensus 5 tA~~~l~~~~~~~-~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 83 (208)
.+|.++.+...+. .|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|.. +. ++.+.++
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~- 266 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE- 266 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh-
Confidence 3466665543544 8999999995 99999999999999999999998887766665 55653 22 2222222
Q ss_pred HCCCCccEEEeCCCc-hhHH-HHHHhhccCCEEEEEeccc
Q 028523 84 YFPEGINIYFENVGG-KMLD-AVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 84 ~~~~~~d~v~d~~g~-~~~~-~~~~~l~~~G~~v~~g~~~ 121 (208)
++|++|+++|. ..+. ..+..|++|+.++..|...
T Consensus 267 ----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 267 ----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 58999999995 4554 6889999999999998754
No 135
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.72 E-value=8.9e-07 Score=69.68 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=72.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC-
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG- 97 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g- 97 (208)
+.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+.+.++......+.+...+.+.+ . .+|++|+|++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l----~-~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV----K-RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH----c-cCCEEEEcccc
Confidence 345889996 99999999999999999999999988888776466653222222211222222 2 4899999973
Q ss_pred --c--h--hHHHHHHhhccCCEEEEEecccccC
Q 028523 98 --G--K--MLDAVLLNMRIQGRITLCGMISQYN 124 (208)
Q Consensus 98 --~--~--~~~~~~~~l~~~G~~v~~g~~~~~~ 124 (208)
. + .....++.+++++.++.++...+.+
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~ 273 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGC 273 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCC
Confidence 2 2 2477888899999999999877654
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.68 E-value=6.6e-07 Score=70.63 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=75.7
Q ss_pred HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523 6 AYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 6 A~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 84 (208)
++.++.+..+ ...|++|+|.|. |.+|+..++.++.+|++|+++..++.+...+. ..|+ .+. ...+.++
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~-~v~------~leeal~-- 249 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGF-RVM------TMEEAAK-- 249 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCC-EeC------CHHHHHh--
Confidence 3444444333 368999999995 99999999999999999999988887766666 5665 222 2222222
Q ss_pred CCCCccEEEeCCCch-hHH-HHHHhhccCCEEEEEeccc
Q 028523 85 FPEGINIYFENVGGK-MLD-AVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 85 ~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 121 (208)
+.|++|+++|.. .+. ..+..+++++.++.+|...
T Consensus 250 ---~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 250 ---IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred ---cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 479999999964 455 4888999999999988753
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.67 E-value=5.9e-07 Score=71.65 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=77.3
Q ss_pred HHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523 6 AYAGFFEVCSP-KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 6 A~~~l~~~~~~-~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 84 (208)
.+.++.+..++ -.|++++|.|. |.+|...++.++.+|++|+++.+++.+...+. ..|.. ++ .+.+.++
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~-- 308 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS-- 308 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh--
Confidence 35555555444 67999999995 99999999999999999999998887766665 56653 21 2333332
Q ss_pred CCCCccEEEeCCCch-h-HHHHHHhhccCCEEEEEecc
Q 028523 85 FPEGINIYFENVGGK-M-LDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 85 ~~~~~d~v~d~~g~~-~-~~~~~~~l~~~G~~v~~g~~ 120 (208)
..|+++++.|.. . ....+..|++++.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 379999999964 3 48899999999999999874
No 138
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.58 E-value=4.4e-07 Score=63.93 Aligned_cols=79 Identities=16% Similarity=0.304 Sum_probs=59.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeEecCCCcc---HHHHHHhHCCCCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPD---LDAALKRYFPEGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~---~~~~~~~~~~~~~d~v 92 (208)
-|.+|||+||++|+|+..++-...+|=+||++.|++++++.++++... ..+.|..+.+. +.+++++..+ ..+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence 478999999999999999999999999999999999999999844332 24666655422 4444443333 47888
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+++.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 88876
No 139
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.56 E-value=1.1e-06 Score=64.97 Aligned_cols=104 Identities=19% Similarity=0.208 Sum_probs=70.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---CCee--EecCCCccHHHHHHhHC--CCCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG---FDEA--FNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g---~~~v--~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
.+++++|+||+|++|..+++.+...|++|+.+++++++.+.+.+++. .... .|..+.+...+.+.+.. -+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999999999999887766632332 2122 23333312333333221 13689
Q ss_pred EEEeCCCch------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523 91 IYFENVGGK------------------------MLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 91 ~v~d~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
.++.+.+.. .++..++.++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999888731 1344556677789999988754
No 140
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.56 E-value=3.8e-06 Score=64.14 Aligned_cols=94 Identities=19% Similarity=0.263 Sum_probs=73.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.+.+++|+|. |.+|+.+++.++.+|++|+++++++++.+.++ .+|...+ .+. ++.+.+. ++|+||+|++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~~---~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HLS---ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cHH---HHHHHhC-----CCCEEEECCC
Confidence 6899999995 99999999999999999999999988888887 7886432 111 2222222 4899999988
Q ss_pred ch-hHHHHHHhhccCCEEEEEecccc
Q 028523 98 GK-MLDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 98 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
.. .....++.+++++.++.++..++
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence 54 34677788999999999987654
No 141
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.56 E-value=5.8e-07 Score=66.73 Aligned_cols=81 Identities=19% Similarity=0.313 Sum_probs=60.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----C-e--eEecCCCccHHHHHH-hHCCC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----D-E--AFNYKEEPDLDAALK-RYFPE 87 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~-~--v~~~~~~~~~~~~~~-~~~~~ 87 (208)
...+.+++|+|||+|+|...+..+...|.+++.+.|++++++.+.+++.- . . .+|..+. +-.+.+. ++...
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhc
Confidence 35678999999999999999999999999999999999998887765542 1 1 3566655 3333333 22222
Q ss_pred --CccEEEeCCC
Q 028523 88 --GINIYFENVG 97 (208)
Q Consensus 88 --~~d~v~d~~g 97 (208)
.+|+.+++.|
T Consensus 82 ~~~IdvLVNNAG 93 (265)
T COG0300 82 GGPIDVLVNNAG 93 (265)
T ss_pred CCcccEEEECCC
Confidence 6999999998
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=98.51 E-value=1.4e-06 Score=74.15 Aligned_cols=105 Identities=19% Similarity=0.260 Sum_probs=72.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C---eeEecCCCccHHHHHHhHC--CCCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D---EAFNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
+|+++||+||+|++|..+++.+...|++|++++++.++.+.+.+.++. . ...|..+...+.+.+.+.. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999999998887766545543 1 1234444323333333332 23799
Q ss_pred EEEeCCCc-h-------------------------hHHHHHHhhcc---CCEEEEEecccc
Q 028523 91 IYFENVGG-K-------------------------MLDAVLLNMRI---QGRITLCGMISQ 122 (208)
Q Consensus 91 ~v~d~~g~-~-------------------------~~~~~~~~l~~---~G~~v~~g~~~~ 122 (208)
++|++.|. . .++.+++.+++ +|+++.+++...
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 99999982 1 13344556655 689999987543
No 143
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.48 E-value=4.9e-06 Score=63.08 Aligned_cols=79 Identities=15% Similarity=0.293 Sum_probs=58.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhH---CCCCccEEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRY---FPEGINIYF 93 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~---~~~~~d~v~ 93 (208)
.+.+++|+||+|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.+. ..+++|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999999999999999988889999999999998887776 545433 34555442333333332 334799999
Q ss_pred eCCC
Q 028523 94 ENVG 97 (208)
Q Consensus 94 d~~g 97 (208)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 144
>PRK12742 oxidoreductase; Provisional
Probab=98.48 E-value=4e-06 Score=61.86 Aligned_cols=102 Identities=20% Similarity=0.216 Sum_probs=66.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
+++++||+||+|++|...++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+. +++|++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 4789999999999999999999999999888764 45555555435565322 3443321233333221 369999999
Q ss_pred CCch----h----------------------HHHHHHhhccCCEEEEEeccc
Q 028523 96 VGGK----M----------------------LDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 96 ~g~~----~----------------------~~~~~~~l~~~G~~v~~g~~~ 121 (208)
.|.. . ...+++.++.+|+++.++...
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 8731 0 123444566689999887754
No 145
>PRK06182 short chain dehydrogenase; Validated
Probab=98.46 E-value=3.8e-06 Score=63.46 Aligned_cols=79 Identities=24% Similarity=0.397 Sum_probs=58.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHC--CCCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v~d 94 (208)
++.+++|+|++|++|...++.+...|++|+++++++++.+.+. ..+... ..|..+.+++...+.+.. .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999999999999999998889999999999988776665 444432 356555423444444332 237999999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 987
No 146
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.46 E-value=4.3e-06 Score=63.23 Aligned_cols=77 Identities=19% Similarity=0.364 Sum_probs=56.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEeCC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFENV 96 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d~~ 96 (208)
.++||+||+|++|...++.+...|++|++++++.++.+.+. ..+... ..|..+...+.+.+..... +++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899999999999999999889999999999988777666 455433 3566554234433433322 3699999998
Q ss_pred C
Q 028523 97 G 97 (208)
Q Consensus 97 g 97 (208)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 147
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.43 E-value=5.4e-06 Score=62.26 Aligned_cols=104 Identities=16% Similarity=0.175 Sum_probs=70.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
++.+++|+||++++|...++.+...|++|+++++++++.+.+.++++... ..|..+..++.+.+..... +++|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999988899999999999887666654655321 2344443233333333221 268999
Q ss_pred EeCCCch-------------------------hHHHHHHhh-ccCCEEEEEeccc
Q 028523 93 FENVGGK-------------------------MLDAVLLNM-RIQGRITLCGMIS 121 (208)
Q Consensus 93 ~d~~g~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~ 121 (208)
+++.|.. .....++.| +++|+++.++...
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 9987721 012233444 5678999987654
No 148
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.36 E-value=1.2e-05 Score=60.32 Aligned_cols=106 Identities=19% Similarity=0.291 Sum_probs=73.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e----EecCCCccHHHHHHhHC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-A----FNYKEEPDLDAALKRYF--PE 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~-v----~~~~~~~~~~~~~~~~~--~~ 87 (208)
.|..|+|+|||+|+|.+.+.-.-..|++++.+++..++++.+.+ +.+... + +|..+.++....+.+.. -+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 57899999999999998888888889999999988887766622 333332 2 34444323443333322 23
Q ss_pred CccEEEeCCC-chh-------------------------HHHHHHhhccC--CEEEEEeccccc
Q 028523 88 GINIYFENVG-GKM-------------------------LDAVLLNMRIQ--GRITLCGMISQY 123 (208)
Q Consensus 88 ~~d~v~d~~g-~~~-------------------------~~~~~~~l~~~--G~~v~~g~~~~~ 123 (208)
++|+.++..| +.. ...+++.|++. |+++.+++..|.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 7999999887 321 25577777663 999999987763
No 149
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.32 E-value=1.6e-05 Score=59.77 Aligned_cols=105 Identities=21% Similarity=0.316 Sum_probs=70.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-e--eEecCCCccHHHHHHhHCC-CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFP-EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~~~~~~~-~~~ 89 (208)
+|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..+....+.+... +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999999999999999999999999999999888766554333 322 1 2344443233333333321 369
Q ss_pred cEEEeCCCch-----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 028523 90 NIYFENVGGK-----------M---------------LDAVLLNMRI--QGRITLCGMISQ 122 (208)
Q Consensus 90 d~v~d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~ 122 (208)
|+++++.|.. . ...+++.|.. .|+++.++....
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 9999988731 0 2345555643 489999887653
No 150
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.3e-05 Score=62.39 Aligned_cols=105 Identities=22% Similarity=0.206 Sum_probs=70.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+ +.|... ..|..+..++.+.+..... +++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 46789999999999999999998899999999999887655442 334432 2455544233333332221 369
Q ss_pred cEEEeCCCchh--------------------------HHHHHHhhcc--CCEEEEEecccc
Q 028523 90 NIYFENVGGKM--------------------------LDAVLLNMRI--QGRITLCGMISQ 122 (208)
Q Consensus 90 d~v~d~~g~~~--------------------------~~~~~~~l~~--~G~~v~~g~~~~ 122 (208)
|++|++.|... ...+++.+.+ .|+++.+++...
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 99999987310 1234555544 589999887654
No 151
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.31 E-value=4.9e-06 Score=63.71 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=58.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--e--EecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--A--FNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v--~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
+|.++||+||+|++|..+++.+...|++|+++++++++.+.+.++++.. . . .|..+..+..+.+.+... +++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999999999999999999988877765466531 1 1 455543233333333322 3699
Q ss_pred EEEeCCCc
Q 028523 91 IYFENVGG 98 (208)
Q Consensus 91 ~v~d~~g~ 98 (208)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999883
No 152
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.30 E-value=6.2e-06 Score=55.58 Aligned_cols=95 Identities=19% Similarity=0.242 Sum_probs=64.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEEE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
-++.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.+.++.. .++++.+ ..+.+. .+|++|
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~-----~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQ-----EADIVI 80 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHH-----TESEEE
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHh-----hCCeEE
Confidence 35889999996 9999999999999999 6999999999988887677432 3455543 222232 499999
Q ss_pred eCCCchhH---HHHHHhhcc-CCEEEEEecc
Q 028523 94 ENVGGKML---DAVLLNMRI-QGRITLCGMI 120 (208)
Q Consensus 94 d~~g~~~~---~~~~~~l~~-~G~~v~~g~~ 120 (208)
+|++.... ...+....+ -+.++.++.+
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 99985422 223222222 1467776543
No 153
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.26 E-value=2.4e-05 Score=58.14 Aligned_cols=80 Identities=13% Similarity=0.162 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHC--CCCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYF--PEGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~d~v 92 (208)
++.+++|+||+|++|...++.+...|++|++++++++..+.+.++++... ..|..+..+....+.... .+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999988777666554666532 223333212222222221 1368999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|++.|
T Consensus 85 i~~ag 89 (249)
T PRK06500 85 FINAG 89 (249)
T ss_pred EECCC
Confidence 99887
No 154
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.26 E-value=4.8e-06 Score=69.39 Aligned_cols=97 Identities=14% Similarity=0.210 Sum_probs=64.3
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHhcCCCeeEecCC
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS---------------------KDKVDLLKNKFGFDEAFNYKE 73 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s---------------------~~~~~~~~~~~g~~~v~~~~~ 73 (208)
..+.|++|+|.|+ |++|+++++.++..|++|+++... +.+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 4678999999996 999999999999999999888742 34556677 789876655433
Q ss_pred CccH-HHHHHhHCCCCccEEEeCCCch-hHHHHHHhhccCCEEEEE
Q 028523 74 EPDL-DAALKRYFPEGINIYFENVGGK-MLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 74 ~~~~-~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~ 117 (208)
..+. .+.+ ..++|+||+++|.. .....+.....+|.+..+
T Consensus 211 ~~~~~~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~ 252 (564)
T PRK12771 211 GEDITLEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV 252 (564)
T ss_pred CCcCCHHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence 1121 1111 12599999999953 333333334444544433
No 155
>PRK06484 short chain dehydrogenase; Validated
Probab=98.26 E-value=1.7e-05 Score=65.44 Aligned_cols=106 Identities=15% Similarity=0.188 Sum_probs=74.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINI 91 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~ 91 (208)
..|.++||+||++++|...++.+...|++|+++++++++.+.+.++++... ..|..+.+.+.+.+.+... +++|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357899999999999999999888899999999999888877765565432 2455444234333433322 36999
Q ss_pred EEeCCCc-h---h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523 92 YFENVGG-K---M-----------------------LDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 92 v~d~~g~-~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
+|++.|. . . .+.++..|+.+|+++.++...+
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9998872 1 0 2334556666799999887653
No 156
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.26 E-value=9.5e-06 Score=60.66 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=57.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d 94 (208)
+|.+++|+||+|++|...++.+...|++|+++++++.+.+...++++... ..|..+...+...+.+... +++|.++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57899999999999999999998899999999998887666553555422 3455544233333333221 36899999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 86 ~ag 88 (255)
T PRK06057 86 NAG 88 (255)
T ss_pred CCC
Confidence 886
No 157
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.24 E-value=9.5e-06 Score=60.95 Aligned_cols=80 Identities=16% Similarity=0.250 Sum_probs=57.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
++.+++|+||++++|...++.+...|++|+++++++++.+.+.++++.. . ..|..+..+....+.+... +++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999999999999999999889999999999988877776455432 1 2344433233333333322 369999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|++.|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 99887
No 158
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.24 E-value=2e-05 Score=59.12 Aligned_cols=83 Identities=13% Similarity=0.238 Sum_probs=56.8
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--e--eEecCCCccHHHHHHhHCC--CC
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
...++.++||+||+|++|..+++.+...|++|+++.++++..+.+.+..... . ..|..+...+.+.+.+... ++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3457789999999999999999998889999999999887766655333222 1 2344443223332332211 26
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|+||.+.|
T Consensus 87 ~d~vi~~ag 95 (264)
T PRK12829 87 LDVLVNNAG 95 (264)
T ss_pred CCEEEECCC
Confidence 999999887
No 159
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.23 E-value=2.8e-05 Score=63.11 Aligned_cols=80 Identities=18% Similarity=0.262 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcCCCe-eEecCCCccHHHHHHhHC--CCCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYF--PEGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~--~~~~d~v 92 (208)
++.++||+||+|++|...++.+...|++|++++++. ++.+.+.++++... .+|..+.......+.... .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 578999999999999999999988999999988643 33344443566432 356555422333333222 1269999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|++.|
T Consensus 289 i~~AG 293 (450)
T PRK08261 289 VHNAG 293 (450)
T ss_pred EECCC
Confidence 99987
No 160
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.22 E-value=6e-05 Score=57.34 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=69.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|++++|+|. |.+|..+++.++..|++|++..+++++.+.+. +.|.. .+.+. ++.+.+. .+|+||++++
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~~---~l~~~l~-----~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPLN---KLEEKVA-----EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecHH---HHHHHhc-----cCCEEEECCC
Confidence 5789999995 99999999999999999999999988877776 66643 22111 2222222 4899999997
Q ss_pred chh-HHHHHHhhccCCEEEEEeccc
Q 028523 98 GKM-LDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 98 ~~~-~~~~~~~l~~~G~~v~~g~~~ 121 (208)
... -...+..++++..++.++..+
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcCC
Confidence 543 345677888888888887754
No 161
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.22 E-value=1.2e-05 Score=62.60 Aligned_cols=80 Identities=19% Similarity=0.312 Sum_probs=56.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
++++++|+||+|++|...++.+...|++|+.+++++++.+.+.+ +.|... ..|..+.+++...+.+.. .+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999999999887765442 345432 235554322322222221 2469
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 86 D~lVnnAG 93 (330)
T PRK06139 86 DVWVNNVG 93 (330)
T ss_pred CEEEECCC
Confidence 99999987
No 162
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.22 E-value=1e-05 Score=61.08 Aligned_cols=79 Identities=14% Similarity=0.199 Sum_probs=56.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-CCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FDE-AFNYKEEPDLDAALKRYFP--EGINIYFE 94 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d 94 (208)
+.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++ ... ..|..+.+++.+.+..... +++|++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999999999998888889999999999888776654555 221 3455544233333333321 36999999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 85 ~ag 87 (273)
T PRK07825 85 NAG 87 (273)
T ss_pred CCC
Confidence 987
No 163
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.19 E-value=1.9e-05 Score=63.34 Aligned_cols=91 Identities=18% Similarity=0.181 Sum_probs=70.1
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
.-.|++++|.|. |.+|...++.++.+|++|+++.+++.+...+. ..|+..+ ++.+.++ ..|+++.+
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~~-------~leell~-----~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQVV-------TLEDVVE-----TADIFVTA 316 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCceec-------cHHHHHh-----cCCEEEEC
Confidence 457999999995 99999999999999999999987776654555 4464311 3333332 48999999
Q ss_pred CCc-hhH-HHHHHhhccCCEEEEEecc
Q 028523 96 VGG-KML-DAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 96 ~g~-~~~-~~~~~~l~~~G~~v~~g~~ 120 (208)
+|. ..+ ...+..|++++.++.+|..
T Consensus 317 tGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred CCcccccCHHHHhccCCCcEEEEcCCC
Confidence 985 444 4899999999999999875
No 164
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.19 E-value=1.3e-05 Score=60.13 Aligned_cols=80 Identities=20% Similarity=0.214 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
++.+++|+||+|++|...++.+...|++|++++++.++.+.+.+..+.. . ..|..+..+..+.+.+... +++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999998889999999999888777766333422 1 2344433123333333322 368999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+++.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99876
No 165
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.19 E-value=4e-05 Score=57.00 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=64.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
.+.+++|+||+|++|...++.+...|++|++++++.+ +.+.+.+ ..+.. . ..|..+.+++...+.+... ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999988888999999887653 3332221 22322 1 2354443233333333222 26
Q ss_pred ccEEEeCCCch--------------------hHHHHHHhhccCCEEEEEecc
Q 028523 89 INIYFENVGGK--------------------MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 89 ~d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~ 120 (208)
+|+++.+.+.. .++.+.+.+..+|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89999887631 234455555667899888763
No 166
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.17 E-value=3e-05 Score=57.19 Aligned_cols=80 Identities=15% Similarity=0.288 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---Cee--EecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DEA--FNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
.+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.. ... .|..+..++.+.+..... +++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468899999999999999988877899999999988876665534432 122 243333233333333321 2699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|++.|
T Consensus 85 ~vi~~ag 91 (237)
T PRK07326 85 VLIANAG 91 (237)
T ss_pred EEEECCC
Confidence 9999876
No 167
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.17 E-value=4.9e-05 Score=58.62 Aligned_cols=89 Identities=17% Similarity=0.201 Sum_probs=61.5
Q ss_pred hhhHHHHHHHhcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHH
Q 028523 3 GMTAYAGFFEVCSP---KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD 78 (208)
Q Consensus 3 ~~tA~~~l~~~~~~---~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 78 (208)
..+++.++...... .++.+|+|.|+ |.+|..+++.++..|+ +|+++.+++++...+.+++|.. ++++. ++.
T Consensus 159 ~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~~~ 233 (311)
T cd05213 159 VSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-AVPLD---ELL 233 (311)
T ss_pred cCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-EEeHH---HHH
Confidence 44566666332221 47899999996 9999999999988876 8999999988765554488873 33321 233
Q ss_pred HHHHhHCCCCccEEEeCCCchhH
Q 028523 79 AALKRYFPEGINIYFENVGGKML 101 (208)
Q Consensus 79 ~~~~~~~~~~~d~v~d~~g~~~~ 101 (208)
+.+. .+|+||.|++.+..
T Consensus 234 ~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 234 ELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHh-----cCCEEEECCCCCch
Confidence 3332 38999999996543
No 168
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.17 E-value=2.5e-05 Score=57.88 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+..+... ..|..+...+...+.. .+++|++|++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 56899999999999999999999999999999999887766654555432 3454443122222222 23699999988
Q ss_pred C
Q 028523 97 G 97 (208)
Q Consensus 97 g 97 (208)
|
T Consensus 86 g 86 (245)
T PRK07060 86 G 86 (245)
T ss_pred C
Confidence 7
No 169
>PRK06484 short chain dehydrogenase; Validated
Probab=98.17 E-value=3.4e-05 Score=63.71 Aligned_cols=80 Identities=21% Similarity=0.340 Sum_probs=59.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
++.+++|+|+++++|.+.++.+...|++|+.++++.++.+.+.++++... .+|..+..++.+.+.+... +++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 57899999999999999999999999999999999888776665666432 3455544234444443322 369999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+++.|
T Consensus 84 i~nag 88 (520)
T PRK06484 84 VNNAG 88 (520)
T ss_pred EECCC
Confidence 99876
No 170
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.15 E-value=3.3e-05 Score=57.37 Aligned_cols=81 Identities=16% Similarity=0.196 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.+++|+||+|++|...+..+...|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+.+... +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999988889999999998887665443232 322 2 2344433122222222211 369
Q ss_pred cEEEeCCCc
Q 028523 90 NIYFENVGG 98 (208)
Q Consensus 90 d~v~d~~g~ 98 (208)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999873
No 171
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.15 E-value=0.0001 Score=52.15 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=63.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc---
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG--- 98 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~--- 98 (208)
|+|+||+|.+|...++.+...|.+|++.+|++++.+. ..+. +++..+-. +. +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~-~~~~~d~~-d~-~~~~~al~-~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGV-EIIQGDLF-DP-DSVKAALK-GADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTE-EEEESCTT-CH-HHHHHHHT-TSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccc-ccceeeeh-hh-hhhhhhhh-hcchhhhhhhhhcc
Confidence 7899999999999999999999999999999987765 2233 23322222 32 22222222 59999999982
Q ss_pred --hhHHHHHHhhccCC--EEEEEeccc
Q 028523 99 --KMLDAVLLNMRIQG--RITLCGMIS 121 (208)
Q Consensus 99 --~~~~~~~~~l~~~G--~~v~~g~~~ 121 (208)
+.....++.++..| +++.++...
T Consensus 74 ~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 74 DVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccceeeeccc
Confidence 24556666665543 788777654
No 172
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.14 E-value=6.8e-05 Score=56.19 Aligned_cols=78 Identities=19% Similarity=0.338 Sum_probs=55.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-CC---eeEecCCCccHHHHHHhHC---CCCccEE
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-FD---EAFNYKEEPDLDAALKRYF---PEGINIY 92 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g-~~---~v~~~~~~~~~~~~~~~~~---~~~~d~v 92 (208)
.++||+||+|++|...++.+...|++|++++++.++.+.+.+.++ .. ...|..+..++.+.+.... .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 479999999999999999888889999999999888777653443 11 1345554323333333321 3479999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+.+.|
T Consensus 82 i~~ag 86 (260)
T PRK08267 82 FNNAG 86 (260)
T ss_pred EECCC
Confidence 99987
No 173
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.13 E-value=1.3e-05 Score=60.26 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.+++|+||+|++|...++.+...|++|+.+++++++.+...+++ +.. . .+|..+..++...+.+... +++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988889999999998877654443222 222 1 2344443234343444322 268
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998875
No 174
>PRK06196 oxidoreductase; Provisional
Probab=98.12 E-value=2.3e-05 Score=60.59 Aligned_cols=80 Identities=18% Similarity=0.209 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EGINIYF 93 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~ 93 (208)
.+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.... ..|..+...+.+.+.+... +++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 56899999999999999998888889999999999887665543432112 2344443233333433322 3799999
Q ss_pred eCCC
Q 028523 94 ENVG 97 (208)
Q Consensus 94 d~~g 97 (208)
++.|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9887
No 175
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.11 E-value=6.6e-05 Score=55.32 Aligned_cols=80 Identities=11% Similarity=0.140 Sum_probs=52.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe-eEecCCCccHHHHHHhHCC--CCccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE-AFNYKEEPDLDAALKRYFP--EGINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~ 91 (208)
++.++||+|++|++|..+++.+...|++|+.+++++++.....+++ +... ..|..+..++...+.+... +++|.
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 3789999999999999999988888999999998776543322122 2221 2344333123332332221 26999
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
++++.|
T Consensus 86 vi~~ag 91 (239)
T PRK12828 86 LVNIAG 91 (239)
T ss_pred EEECCc
Confidence 999876
No 176
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.11 E-value=2e-05 Score=59.19 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~~--~ 87 (208)
.|.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++ +... ..|..+.+...+.+.+... +
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999987765543222 1111 2344443233333333322 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|+++++.|
T Consensus 87 ~id~li~~Ag 96 (265)
T PRK07062 87 GVDMLVNNAG 96 (265)
T ss_pred CCCEEEECCC
Confidence 6999999987
No 177
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=98.11 E-value=2.3e-05 Score=50.85 Aligned_cols=95 Identities=18% Similarity=0.304 Sum_probs=64.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
||.+||-.|+ |.|..++.+++ ..+++|++++.+++-.+.+++.. +...-+..... ++ . ......+++|+|+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~-~-~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA-E-FDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC-H-GGTTTSSCEEEEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc-c-cCcccCCCCCEEE
Confidence 5789999984 56888889998 46889999999999888887655 32221111122 33 1 1111223799999
Q ss_pred eCC-Cc----h------hHHHHHHhhccCCEEEEE
Q 028523 94 ENV-GG----K------MLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 94 d~~-g~----~------~~~~~~~~l~~~G~~v~~ 117 (208)
... .. . .++.+.+.|+|||+++.-
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 877 21 1 278889999999998763
No 178
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.10 E-value=8.2e-05 Score=55.38 Aligned_cols=77 Identities=17% Similarity=0.347 Sum_probs=54.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIYFEN 95 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v~d~ 95 (208)
+++|+||+|++|...++.+...|++|+++++++++.+.+.+.++... ..|..+..++.+.+..... +++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999988889999999999888776654455421 2344433223333333222 269999998
Q ss_pred CC
Q 028523 96 VG 97 (208)
Q Consensus 96 ~g 97 (208)
.|
T Consensus 82 ag 83 (248)
T PRK10538 82 AG 83 (248)
T ss_pred CC
Confidence 76
No 179
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.10 E-value=2e-05 Score=59.12 Aligned_cols=80 Identities=14% Similarity=0.170 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~~--~ 87 (208)
.+.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++ +.. . ..|..+..++.+.+.+... +
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4788999999999999999988889999999999887766554333 211 1 2344433233333333221 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|++|++.|
T Consensus 86 ~id~li~~ag 95 (260)
T PRK07063 86 PLDVLVNNAG 95 (260)
T ss_pred CCcEEEECCC
Confidence 6999999887
No 180
>PRK08017 oxidoreductase; Provisional
Probab=98.09 E-value=4.2e-05 Score=57.10 Aligned_cols=77 Identities=17% Similarity=0.293 Sum_probs=56.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHH---HHHhHCCCCccEEEeC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDA---ALKRYFPEGINIYFEN 95 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~---~~~~~~~~~~d~v~d~ 95 (208)
++++|+||+|++|..+++.+...|++|++++++.++.+.++ +.+... ..|..+...+.+ .+.+...+++|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999999999999999999989999999999998887777 666543 345544312222 2222233468888888
Q ss_pred CC
Q 028523 96 VG 97 (208)
Q Consensus 96 ~g 97 (208)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 76
No 181
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.09 E-value=2e-05 Score=60.34 Aligned_cols=80 Identities=23% Similarity=0.360 Sum_probs=54.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
.+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++ +.. . ..|..+...+.+.+.... -+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999988888999999999987766554332 322 1 234443322333333221 1369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++++.|
T Consensus 119 d~li~~AG 126 (293)
T PRK05866 119 DILINNAG 126 (293)
T ss_pred CEEEECCC
Confidence 99999987
No 182
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.09 E-value=7.5e-05 Score=56.42 Aligned_cols=77 Identities=13% Similarity=0.169 Sum_probs=52.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC----eeEecCCCccHHHHHHhHC--CCCccE
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD----EAFNYKEEPDLDAALKRYF--PEGINI 91 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~----~v~~~~~~~~~~~~~~~~~--~~~~d~ 91 (208)
+++|+||+|++|..+++.+...|++|+++.++++..+.+.++ .+.. ...|..+.....+.+.+.. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999998888999999999887765444322 2332 1245554422332233322 136999
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
+|++.|
T Consensus 82 lv~~ag 87 (272)
T PRK07832 82 VMNIAG 87 (272)
T ss_pred EEECCC
Confidence 999987
No 183
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.08 E-value=0.00012 Score=60.31 Aligned_cols=103 Identities=15% Similarity=0.194 Sum_probs=67.4
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--------CC-----Ce--eEecCCCccHH
Q 028523 14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--------GF-----DE--AFNYKEEPDLD 78 (208)
Q Consensus 14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--------g~-----~~--v~~~~~~~~~~ 78 (208)
.+.+.|.+|||+||+|++|..+++.+...|++|++++|+.++.+.+.+.+ |. .. ..|..+.
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~---- 150 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP---- 150 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH----
Confidence 45568899999999999999999998888999999999988766543221 21 11 2333322
Q ss_pred HHHHhHCCCCccEEEeCCCchh----------------HHHHHHhhcc--CCEEEEEeccc
Q 028523 79 AALKRYFPEGINIYFENVGGKM----------------LDAVLLNMRI--QGRITLCGMIS 121 (208)
Q Consensus 79 ~~~~~~~~~~~d~v~d~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~ 121 (208)
+.+.+.. +++|+||++.|... ...+++.+.. .|+||.++...
T Consensus 151 esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 151 DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 2233322 25999999987320 1223333333 37899988754
No 184
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.07 E-value=3.6e-05 Score=59.44 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----C-CC-e--eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----G-FD-E--AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g-~~-~--v~~~~~~~~~~~~~~~~~~--~ 87 (208)
+|.+++|+||++++|..+++.+...|++|++++++.++.+.+.+++ + .. . .+|..+..+..+.+.+... +
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999888888999999999987765443232 1 11 1 2354443233333333222 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|++|++.|
T Consensus 93 ~iD~li~nAG 102 (313)
T PRK05854 93 PIHLLINNAG 102 (313)
T ss_pred CccEEEECCc
Confidence 6999999877
No 185
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.07 E-value=2.3e-05 Score=58.55 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=55.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
+|.++||+||++++|...++.+...|++|++++++.++.+.+.+++ +... ..|..+...+.+.+.+... +++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999998889999999999888766554333 3211 2344443233333333221 369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++++.|
T Consensus 88 d~lv~~ag 95 (253)
T PRK05867 88 DIAVCNAG 95 (253)
T ss_pred CEEEECCC
Confidence 99999877
No 186
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.07 E-value=0.00011 Score=52.50 Aligned_cols=106 Identities=15% Similarity=0.281 Sum_probs=76.0
Q ss_pred CCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCcc---HHHHHHhHCCCCccEE
Q 028523 18 QGEYVFVSA-ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPD---LDAALKRYFPEGINIY 92 (208)
Q Consensus 18 ~g~~vli~g-a~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~---~~~~~~~~~~~~~d~v 92 (208)
....|||+| ++||+|.+.+.-....|+.|+++.|+-+.+..+..++|. ..-+|.+++++ +...+++...|+.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 346788887 567999998888888999999999999998887767886 34566665423 3334555566689999
Q ss_pred EeCCCchh-------------------------HHH--HHHhhccCCEEEEEeccccc
Q 028523 93 FENVGGKM-------------------------LDA--VLLNMRIQGRITLCGMISQY 123 (208)
Q Consensus 93 ~d~~g~~~-------------------------~~~--~~~~l~~~G~~v~~g~~~~~ 123 (208)
++..|.++ +.. ...+.+..|++|.+|+..+.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~ 143 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV 143 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence 99877442 111 22345678999999887653
No 187
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.07 E-value=0.00011 Score=55.27 Aligned_cols=81 Identities=22% Similarity=0.329 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-e--eEecCCCccHHHHHHhHC-CCCccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYF-PEGINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~--v~~~~~~~~~~~~~~~~~-~~~~d~ 91 (208)
++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+.... .+++|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999988888999999999988776665343 211 1 233333312222222221 236899
Q ss_pred EEeCCCc
Q 028523 92 YFENVGG 98 (208)
Q Consensus 92 v~d~~g~ 98 (208)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9998873
No 188
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.06 E-value=4.5e-05 Score=59.09 Aligned_cols=80 Identities=15% Similarity=0.256 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCC-ccHHHHHHhHCCC-
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEE-PDLDAALKRYFPE- 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~-~~~~~~~~~~~~~- 87 (208)
.|.+++|+||++++|.+.++.....|++|+.+++++++.+.+.+++ +... .+|..+. .+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5899999999999999988888788999999999998876654332 2111 3454421 1233344444344
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
.+|+++++.|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 5779999876
No 189
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.06 E-value=3.4e-05 Score=57.61 Aligned_cols=80 Identities=24% Similarity=0.356 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.+++|+||++++|...++.+...|++|+.+++++++.+.+.+++ +... ..|..+.+.....+.+... +++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999988889999999999988766554333 3221 2344433223333333222 269
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 85 d~li~~ag 92 (254)
T PRK07478 85 DIAFNNAG 92 (254)
T ss_pred CEEEECCC
Confidence 99999887
No 190
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.06 E-value=6e-05 Score=53.30 Aligned_cols=89 Identities=21% Similarity=0.265 Sum_probs=65.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
-.|.+|.|+| .|.+|+..+++++.+|++|++.+++........ ..+. .+. ++.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~----~~~---~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGV----EYV---SLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTE----EES---SHHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc-cccc----eee---ehhhhcch-----hhhhhhhh
Confidence 4689999999 599999999999999999999998888766444 4443 121 45555554 79999987
Q ss_pred C-ch-----hHHHHHHhhccCCEEEEEec
Q 028523 97 G-GK-----MLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 97 g-~~-----~~~~~~~~l~~~G~~v~~g~ 119 (208)
. .+ .-...+..|+++..+|.++.
T Consensus 100 plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred ccccccceeeeeeeeeccccceEEEeccc
Confidence 7 33 24678889999999888765
No 191
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.05 E-value=3.4e-05 Score=56.60 Aligned_cols=77 Identities=17% Similarity=0.194 Sum_probs=54.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.+++|+|++|++|...++.+...|++|+++++++++.+.+. +++... .+|..+.+.+.+.+.....+++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46999999999999999888888999999999887766665 443222 344444323333344443347999998876
No 192
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.05 E-value=3.6e-05 Score=58.33 Aligned_cols=81 Identities=17% Similarity=0.156 Sum_probs=55.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
.+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+..+.. . ..|..+.+.+...+..... +++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999999999999999988888999999999988877666333321 1 2344443223333333221 268999
Q ss_pred EeCCCc
Q 028523 93 FENVGG 98 (208)
Q Consensus 93 ~d~~g~ 98 (208)
+++.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999873
No 193
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.04 E-value=0.00012 Score=54.74 Aligned_cols=80 Identities=23% Similarity=0.234 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFDE---AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
++.+++|+||+|++|...++.+...|++|+++++++...+...+ ..+... ..|..+..+..+.+.+... +++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 46889999999999999999888899999999987543222220 223321 3455543233333333322 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
+++.+.|
T Consensus 87 ~lv~nAg 93 (260)
T PRK12823 87 VLINNVG 93 (260)
T ss_pred EEEECCc
Confidence 9999886
No 194
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.04 E-value=0.00011 Score=54.90 Aligned_cols=80 Identities=19% Similarity=0.278 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
++.+++|+|++|++|...++.....|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+.... .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999888888999999999888765543233 322 1 234444322333333322 1269
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.+
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99999886
No 195
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.04 E-value=3e-05 Score=57.63 Aligned_cols=81 Identities=20% Similarity=0.277 Sum_probs=55.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC--CC---eeEecCCCccHHHHHHhHC--CCCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG--FD---EAFNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+...+...+.+.. .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999999999998888889999999999887666543443 11 1234343323333333321 12689
Q ss_pred EEEeCCCc
Q 028523 91 IYFENVGG 98 (208)
Q Consensus 91 ~v~d~~g~ 98 (208)
.+|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998873
No 196
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.04 E-value=8.6e-05 Score=56.26 Aligned_cols=79 Identities=15% Similarity=0.286 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC---e--eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD---E--AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~---~--v~~~~~~~~~~~~~~~~~~--~ 87 (208)
.+.++||+||+|++|...++.+...|++|++++++++..+.+.+. .+.. . ..|..+..++.. +.+... +
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 356899999999999999988888899999999888766554322 2211 1 235544323333 433322 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|+++.+.|
T Consensus 81 ~id~vv~~ag 90 (280)
T PRK06914 81 RIDLLVNNAG 90 (280)
T ss_pred CeeEEEECCc
Confidence 6899999876
No 197
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.03 E-value=4.1e-05 Score=57.53 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.++||+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+...+...+.+... +++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999998889999999999887765544232 322 1 2444443223322333211 369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999887
No 198
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.03 E-value=3.5e-05 Score=57.57 Aligned_cols=81 Identities=21% Similarity=0.310 Sum_probs=55.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-Ce--eEecCCCccHHHHHHhHC--CCC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-DE--AFNYKEEPDLDAALKRYF--PEG 88 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~-~~--v~~~~~~~~~~~~~~~~~--~~~ 88 (208)
..+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+ +. .. ..|..+..++.+.+.+.. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35789999999999999999999889999999999988776554332 21 12 234443323333333221 236
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|++.|
T Consensus 87 ~d~li~~ag 95 (258)
T PRK06949 87 IDILVNNSG 95 (258)
T ss_pred CCEEEECCC
Confidence 899999887
No 199
>PRK09186 flagellin modification protein A; Provisional
Probab=98.02 E-value=3.8e-05 Score=57.37 Aligned_cols=80 Identities=14% Similarity=0.215 Sum_probs=55.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~~--~ 87 (208)
++.+++|+||+|++|...+..+...|++|+++++++++.+.+.+++ +... ..|..+...+.+.+.+... +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999988889999999999888766554343 2211 2355443234343443322 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|+++++.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999875
No 200
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.02 E-value=5.1e-05 Score=56.97 Aligned_cols=82 Identities=22% Similarity=0.319 Sum_probs=55.7
Q ss_pred CCCCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCCee----EecCCCccHHHHHHhHC-
Q 028523 16 PKQGEYVFVSAASG-AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFDEA----FNYKEEPDLDAALKRYF- 85 (208)
Q Consensus 16 ~~~g~~vli~ga~g-~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~~~~~~- 85 (208)
+.++.+++|+||+| ++|.++++.+...|++|+++++++++.+...++ +|...+ .|..+.+.+...+....
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678999999986 899999999999999999999887766544322 443222 34444322333333221
Q ss_pred -CCCccEEEeCCC
Q 028523 86 -PEGINIYFENVG 97 (208)
Q Consensus 86 -~~~~d~v~d~~g 97 (208)
.+++|++|++.|
T Consensus 94 ~~g~id~li~~ag 106 (262)
T PRK07831 94 RLGRLDVLVNNAG 106 (262)
T ss_pred HcCCCCEEEECCC
Confidence 136999999988
No 201
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.01 E-value=5e-05 Score=61.05 Aligned_cols=88 Identities=23% Similarity=0.287 Sum_probs=62.0
Q ss_pred chhhHHHHHHHhcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccH
Q 028523 2 PGMTAYAGFFEVCS---PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL 77 (208)
Q Consensus 2 ~~~tA~~~l~~~~~---~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 77 (208)
+..+++.++..... -.++.+|+|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+.+|.+ ++++. +.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD---EL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---HH
Confidence 34566777743322 257899999995 9999999999999998 8999999988876554478753 33321 22
Q ss_pred HHHHHhHCCCCccEEEeCCCch
Q 028523 78 DAALKRYFPEGINIYFENVGGK 99 (208)
Q Consensus 78 ~~~~~~~~~~~~d~v~d~~g~~ 99 (208)
.+.+. ++|+||+|++++
T Consensus 237 ~~~l~-----~aDvVI~aT~s~ 253 (423)
T PRK00045 237 PEALA-----EADIVISSTGAP 253 (423)
T ss_pred HHHhc-----cCCEEEECCCCC
Confidence 22221 589999999853
No 202
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.01 E-value=3.4e-05 Score=57.68 Aligned_cols=81 Identities=17% Similarity=0.203 Sum_probs=55.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHCC--CC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
-.+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++ +.. ...|..+...+...+.+... ++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35788999999999999999988899999999999887765554333 221 13444433233333333221 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|.+.|
T Consensus 83 ~d~vi~~ag 91 (258)
T PRK07890 83 VDALVNNAF 91 (258)
T ss_pred ccEEEECCc
Confidence 899999886
No 203
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.01 E-value=0.00014 Score=54.51 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=66.6
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHhcCCCee--EecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDK---VDLLKNKFGFDEA--FNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~--~~ 88 (208)
+|.+++|+||+ +++|.+.++.+...|++|+++.++++. .+.+.++++.... .|..+..+..+.+..... ++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999998 499999999888899999999887543 2333324443222 344433233333333322 36
Q ss_pred ccEEEeCCCc-h--------------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523 89 INIYFENVGG-K--------------M---------------LDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 89 ~d~v~d~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+|+++++.|. . . .+.+++.|+.+|+++.++...
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 9999998862 1 0 234566676778988877644
No 204
>PRK06128 oxidoreductase; Provisional
Probab=98.01 E-value=0.0001 Score=56.53 Aligned_cols=104 Identities=16% Similarity=0.211 Sum_probs=65.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHhcCCCe---eEecCCCccHHHHHHhHCC--
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVD----LLKNKFGFDE---AFNYKEEPDLDAALKRYFP-- 86 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~----~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~-- 86 (208)
.+.++||+||++++|...++.+...|++|+++.++.+ +.+ .++ ..|... ..|..+...+.+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4679999999999999999888889999988875432 222 222 334322 2344443223333333222
Q ss_pred CCccEEEeCCCc-h--------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523 87 EGINIYFENVGG-K--------------------------MLDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 87 ~~~d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
+++|++|++.|. . ..+.+++.|.++|+++.++....
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 369999998872 1 12334455667889998877554
No 205
>PRK05717 oxidoreductase; Validated
Probab=98.00 E-value=5e-05 Score=56.79 Aligned_cols=80 Identities=15% Similarity=0.244 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
.|.+++|+||+|++|..+++.+...|++|+.++++.++.+.+.++++... ..|..+...+.+.+.+... +++|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 47889999999999999998888889999999888766555443555321 3344443233333333322 258999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|.+.|
T Consensus 89 i~~ag 93 (255)
T PRK05717 89 VCNAA 93 (255)
T ss_pred EECCC
Confidence 99887
No 206
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.00 E-value=5.2e-05 Score=58.77 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---C-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---D-E--AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
.+.+++|+||+|++|...++.+...|++|++++++.++.+.+.++++. . . ..|..+...+.+.+.+.. .+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999988888899999999998876665545432 1 1 234444322333333321 2369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
No 207
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.98 E-value=0.00011 Score=52.53 Aligned_cols=99 Identities=17% Similarity=0.249 Sum_probs=70.8
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCee-EecCCCccHHHHHHhHCCC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEPDLDAALKRYFPE 87 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~~~~ 87 (208)
....+++|++||=.| +|+|..++-+++..| +|+.+.+.++=.+.+++ .+|...| +...+. ..-+...
T Consensus 66 ~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG------~~G~~~~ 136 (209)
T COG2518 66 QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG------SKGWPEE 136 (209)
T ss_pred HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc------ccCCCCC
Confidence 556899999999998 577999999999988 99999988774444432 6777443 222221 1111222
Q ss_pred -CccEEEeCCCchhH-HHHHHhhccCCEEEEEec
Q 028523 88 -GINIYFENVGGKML-DAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 88 -~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~ 119 (208)
+||.|+-+.+.+.. ...++.|++||+++..-.
T Consensus 137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 79999988886544 678899999999887654
No 208
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.98 E-value=5.3e-05 Score=56.56 Aligned_cols=79 Identities=15% Similarity=0.267 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCC--CCccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFP--EGINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~--~~~d~ 91 (208)
++.++||+||+|++|...++.+...|++|+.++++++..+... ++.... ..|..+..++...+.+... +++|.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999999999999999888889999999998876554444 332211 2343333123333332211 26899
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
++.+.|
T Consensus 93 vi~~ag 98 (255)
T PRK06841 93 LVNSAG 98 (255)
T ss_pred EEECCC
Confidence 999887
No 209
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.98 E-value=4.1e-05 Score=58.03 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++ |... ..|..+..++.+.+.+... +++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999999999999999988889999999998887665543333 3321 2344443233333333211 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999887
No 210
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.98 E-value=5.4e-05 Score=56.58 Aligned_cols=80 Identities=20% Similarity=0.327 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++ |... ..|..+...+...+.+.. -+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999988888999999998887655443233 3211 234444323333333322 1368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 89 d~li~~ag 96 (255)
T PRK07523 89 DILVNNAG 96 (255)
T ss_pred CEEEECCC
Confidence 99999887
No 211
>PLN02253 xanthoxin dehydrogenase
Probab=97.97 E-value=6.9e-05 Score=56.83 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=54.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
.+.+++|+||+|++|.+.++.+...|++|++++++++..+.+.++++. . . ..|..+.+.+.+.+..... +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 468899999999999999988888899999999887765555434432 1 1 2455443233333333222 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|++.|
T Consensus 97 ~li~~Ag 103 (280)
T PLN02253 97 IMVNNAG 103 (280)
T ss_pred EEEECCC
Confidence 9999886
No 212
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.96 E-value=0.00028 Score=50.78 Aligned_cols=100 Identities=20% Similarity=0.318 Sum_probs=68.1
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCC-CeeEecCCCccHHHHHHhHC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGF-DEAFNYKEEPDLDAALKRYF 85 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~-~~v~~~~~~~~~~~~~~~~~ 85 (208)
....+.++++|+-.|+ |+ |..++++++..+ .+|++++.+++..+.+++ .+|. +.+-... . +..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~-~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFT-I 108 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhh-c
Confidence 3457889999999995 54 999999998764 489999999988776653 4562 3221111 1 33332322 2
Q ss_pred CCCccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 028523 86 PEGINIYFENVGG----KMLDAVLLNMRIQGRITL 116 (208)
Q Consensus 86 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 116 (208)
.+.+|.||...+. ..+..+.+.|+++|+++.
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 2369999985542 367788889999999875
No 213
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.96 E-value=7.3e-05 Score=55.61 Aligned_cols=80 Identities=15% Similarity=0.286 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.++||+|++|++|..+++.+...|++|+++++++++.+.+.++ .+... ..|..+.....+.+..... +++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999988999999999888765544322 23321 2333332123333333222 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|.+|++.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 214
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.96 E-value=8.9e-05 Score=55.48 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=53.8
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHH---hcCC-C-e--eEecCCCccHHHHHHhHC
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDK-VDLLKN---KFGF-D-E--AFNYKEEPDLDAALKRYF 85 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~-~~~~~~---~~g~-~-~--v~~~~~~~~~~~~~~~~~ 85 (208)
.+..+.+++|+||+|++|...++-+... |++|+++++++++ .+.+.+ ..+. . . .+|..+..++.+.+.+..
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 3567789999999999999999876666 5899999988765 443322 2232 1 2 244444323333344332
Q ss_pred C-CCccEEEeCCC
Q 028523 86 P-EGINIYFENVG 97 (208)
Q Consensus 86 ~-~~~d~v~d~~g 97 (208)
. +++|+++.+.|
T Consensus 84 ~~g~id~li~~ag 96 (253)
T PRK07904 84 AGGDVDVAIVAFG 96 (253)
T ss_pred hcCCCCEEEEeee
Confidence 2 47999998776
No 215
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.95 E-value=0.00018 Score=54.19 Aligned_cols=101 Identities=20% Similarity=0.206 Sum_probs=75.5
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
+.+++ |.|+|+ |.+|.-++++|-.+|++|...+.+.++++.+...|+-.-..-+++..++.+.++ +.|++|.+
T Consensus 166 V~~~k-v~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIga 238 (371)
T COG0686 166 VLPAK-VVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGA 238 (371)
T ss_pred CCCcc-EEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEE
Confidence 34444 667786 999999999999999999999999999999986666652222333224555544 37999886
Q ss_pred C---Cch----hHHHHHHhhccCCEEEEEeccccc
Q 028523 96 V---GGK----MLDAVLLNMRIQGRITLCGMISQY 123 (208)
Q Consensus 96 ~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~ 123 (208)
+ |.+ ..++..+.|+||+.++.+....+.
T Consensus 239 VLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqGG 273 (371)
T COG0686 239 VLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQGG 273 (371)
T ss_pred EEecCCCCceehhHHHHHhcCCCcEEEEEEEcCCC
Confidence 4 222 478889999999999999987764
No 216
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.95 E-value=9.4e-05 Score=54.26 Aligned_cols=76 Identities=12% Similarity=0.189 Sum_probs=53.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
+++|+||++++|...++.+...|++|+.+.+++++.+.+.++++... ..|..+..++.+.+.+.. +++|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 48999999999999999888889999999999888776654555432 345544323333333332 25899998754
No 217
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.95 E-value=4e-05 Score=57.82 Aligned_cols=102 Identities=19% Similarity=0.270 Sum_probs=62.4
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523 10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP 86 (208)
Q Consensus 10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~ 86 (208)
+.+.+++++|++||-+| .|.|-.+..+++..|++|++++.|+++.+++++ +.|...-+..... ++. ++.
T Consensus 54 ~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~~----~~~- 125 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DYR----DLP- 125 (273)
T ss_dssp HHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--GG----G---
T ss_pred HHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ecc----ccC-
Confidence 44567899999999998 358889999999999999999999999888764 3343221111111 221 111
Q ss_pred CCccEEEe-----CCCc----hhHHHHHHhhccCCEEEEEec
Q 028523 87 EGINIYFE-----NVGG----KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 87 ~~~d~v~d-----~~g~----~~~~~~~~~l~~~G~~v~~g~ 119 (208)
+.||.|+- .+|. ..+..+.+.|+|||+++.-..
T Consensus 126 ~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~i 167 (273)
T PF02353_consen 126 GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQTI 167 (273)
T ss_dssp -S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEEE
T ss_pred CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEec
Confidence 15888754 4442 247888899999999875443
No 218
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.95 E-value=5e-05 Score=56.66 Aligned_cols=79 Identities=15% Similarity=0.207 Sum_probs=53.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-ee--EecCCCccHHHHHHhHCC--CCcc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
|.+++|+||++++|...++.+...|++|+++++++++.+.+.+++ +.. .. .|..+...+.+.+.+... +++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999999999999999999889999999999887665554232 221 22 244443233333333321 3689
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
+++++.|
T Consensus 81 ~lI~~ag 87 (252)
T PRK07677 81 ALINNAA 87 (252)
T ss_pred EEEECCC
Confidence 9999886
No 219
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.94 E-value=9.4e-05 Score=55.37 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=54.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-----eeEecCCCccHHHHHHhHCC--CCccE
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-----EAFNYKEEPDLDAALKRYFP--EGINI 91 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-----~v~~~~~~~~~~~~~~~~~~--~~~d~ 91 (208)
+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++... ..+|..+.+.+.+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 358999999999999999888888999999999888776655344221 12344443233333333322 25899
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
++++.|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 999876
No 220
>PRK06194 hypothetical protein; Provisional
Probab=97.94 E-value=5.5e-05 Score=57.54 Aligned_cols=81 Identities=15% Similarity=0.269 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
.+.++||+||+|++|...++.+...|++|++++++.+..+...+++ +.. . ..|..+..++.+.+.... .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999999999999999988888999999998876655443233 322 1 123333212333222221 1368
Q ss_pred cEEEeCCCc
Q 028523 90 NIYFENVGG 98 (208)
Q Consensus 90 d~v~d~~g~ 98 (208)
|++|++.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999873
No 221
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.94 E-value=8.5e-05 Score=55.93 Aligned_cols=80 Identities=21% Similarity=0.374 Sum_probs=60.2
Q ss_pred CCCCEEEEecCCchHHHHHH-HHHHHcCCEEEEEeCCHHHHHHHHHhc----CC---CeeEecCCCccHHHHHHhHCCC-
Q 028523 17 KQGEYVFVSAASGAVGQLVG-QFAKLVGCYVVGSAGSKDKVDLLKNKF----GF---DEAFNYKEEPDLDAALKRYFPE- 87 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~-qla~~~g~~v~~~~~s~~~~~~~~~~~----g~---~~v~~~~~~~~~~~~~~~~~~~- 87 (208)
+.|++.+|+||+.++|.+-+ ++|+ .|.+|+.+.|++++++.+++++ ++ ..++|+.+++...+.+++...+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 35799999999999998855 5555 9999999999999988776544 32 1267888762234555555555
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
.+-+.++++|
T Consensus 126 ~VgILVNNvG 135 (312)
T KOG1014|consen 126 DVGILVNNVG 135 (312)
T ss_pred ceEEEEeccc
Confidence 7888999988
No 222
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.94 E-value=8.4e-05 Score=57.18 Aligned_cols=80 Identities=20% Similarity=0.240 Sum_probs=53.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~~--~ 87 (208)
.|.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. . .+|..+..+....+.+... +
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5789999999999999999888888999999999877654432222 111 1 2344433233333333322 2
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|++|.+.|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6999999887
No 223
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.93 E-value=0.00012 Score=53.62 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=54.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.+++|+|++|++|...++.+...|++|+.++++++..+.+. ..+.. ...|..+...+...+.....+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence 46899999999999999888778999999999888777776 55543 2344444423333333333337999999876
No 224
>PRK06398 aldose dehydrogenase; Validated
Probab=97.93 E-value=5.5e-05 Score=56.71 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=50.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC--CCccEEEeC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP--EGINIYFEN 95 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~d~v~d~ 95 (208)
+|.++||+||++++|...++.+...|++|+++++++++...+. ....|..+..++.+.+.+... +++|++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4689999999999999999999899999999997764422110 112344443233333333322 269999998
Q ss_pred CC
Q 028523 96 VG 97 (208)
Q Consensus 96 ~g 97 (208)
.|
T Consensus 80 Ag 81 (258)
T PRK06398 80 AG 81 (258)
T ss_pred CC
Confidence 76
No 225
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.93 E-value=8.6e-05 Score=55.56 Aligned_cols=80 Identities=20% Similarity=0.296 Sum_probs=55.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
.+.+++|+|++|++|...++.+...|++|+.++++.++.+.+.++++.. . ..|..+.....+.+.+... +++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3678999999999999999999888999999999988777665455432 1 2343333233333333221 368999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+.+.|
T Consensus 85 i~~ag 89 (257)
T PRK07067 85 FNNAA 89 (257)
T ss_pred EECCC
Confidence 99876
No 226
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.93 E-value=0.00019 Score=56.95 Aligned_cols=104 Identities=17% Similarity=0.134 Sum_probs=72.1
Q ss_pred HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCC
Q 028523 7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 86 (208)
Q Consensus 7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 86 (208)
+..+.+...+++|++||-.|. |.|..+..+++..|++|++++.|++..+.+++...... +..... ++.+ . .
T Consensus 156 ~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~-v~~~~~-D~~~----l-~ 226 (383)
T PRK11705 156 LDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLP-VEIRLQ-DYRD----L-N 226 (383)
T ss_pred HHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCe-EEEEEC-chhh----c-C
Confidence 444556677899999999984 67888889999889999999999999998884332111 111112 3321 1 3
Q ss_pred CCccEEEeC-----CCc----hhHHHHHHhhccCCEEEEEec
Q 028523 87 EGINIYFEN-----VGG----KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 87 ~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g~ 119 (208)
+.+|.|+.. +|. ..+..+.+.|+|||.++....
T Consensus 227 ~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 227 GQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI 268 (383)
T ss_pred CCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 469988643 332 357888899999999887543
No 227
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.93 E-value=7.9e-05 Score=55.38 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
.|.+++|+||+|++|...++.+...|++|+.+++++.. .+.+. +++.. . ..|..+..++...+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999998888889999999987532 23333 44432 1 2344443233333333321 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
+++++.|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9999886
No 228
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.93 E-value=6.2e-05 Score=56.43 Aligned_cols=77 Identities=23% Similarity=0.273 Sum_probs=52.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe--eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRYFP--EGINIYF 93 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~~~~~~~--~~~d~v~ 93 (208)
+++|+||++++|...++.+...|++|+.+++++++.+.+.+++ +... ..|..+..++.+.+.+... +++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5899999999999999888888999999999887765554333 2212 2344443233333333322 3699999
Q ss_pred eCCC
Q 028523 94 ENVG 97 (208)
Q Consensus 94 d~~g 97 (208)
++.|
T Consensus 82 ~naG 85 (259)
T PRK08340 82 WNAG 85 (259)
T ss_pred ECCC
Confidence 9887
No 229
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.92 E-value=9.3e-05 Score=54.62 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=53.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYFE 94 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~d 94 (208)
+.++||+||++++|...++.+...|++|+++++++++. +.++ ..+... ..|..+.+.....+.+... +++|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 45899999999999999998888999999999876543 3333 455422 2344443234444443322 26999999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 81 ~ag 83 (236)
T PRK06483 81 NAS 83 (236)
T ss_pred CCc
Confidence 887
No 230
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.92 E-value=0.00023 Score=53.42 Aligned_cols=105 Identities=10% Similarity=0.059 Sum_probs=67.3
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcC-CC---eeEecCCCccHHHHHHhHCC--
Q 028523 18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFG-FD---EAFNYKEEPDLDAALKRYFP-- 86 (208)
Q Consensus 18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~---~~~~~~~~~~g-~~---~v~~~~~~~~~~~~~~~~~~-- 86 (208)
.|.+++|+||+ +++|.+.++.+...|++|+.++++. ++.+.+.+++. .. ...|..+..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47899999987 7999999988888999999987543 34444443442 21 12455444234444444332
Q ss_pred CCccEEEeCCCc-h------h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523 87 EGINIYFENVGG-K------M-----------------------LDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 87 ~~~d~v~d~~g~-~------~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
+++|+++++.|. . . ....++.|.++|+++.++...+
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 369999998761 1 0 1234556667899998887543
No 231
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00051 Score=50.90 Aligned_cols=77 Identities=19% Similarity=0.232 Sum_probs=50.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.+++|+||+|++|...++.+...|++|+++++++++.+.+.+...... ..|..+.+++.+.+.+.. ..+|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP-FIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc-cCCCEEEEcCc
Confidence 468999999999999888888889999999999887776652221111 345554423444444322 24577666554
No 232
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00015 Score=54.19 Aligned_cols=75 Identities=13% Similarity=0.248 Sum_probs=52.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCCCCccEE
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFPEGINIY 92 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v 92 (208)
+.++||+||+|++|..+++.+...|++|+++++++++.+.+.+ ..+.. . ..|..+. +.+.+...+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence 4579999999999999999999999999999998776655542 22322 1 2344432 22333333479999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|.+.|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99887
No 233
>PRK08589 short chain dehydrogenase; Validated
Probab=97.91 E-value=7.3e-05 Score=56.53 Aligned_cols=79 Identities=18% Similarity=0.264 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.++||+||++++|...++.+...|++|++++++ ++.+.+.+++ +.. ..+|..+.......+.+... +++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 57899999999999999998888889999999988 4443322233 321 13455544233333333321 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 84 d~li~~Ag 91 (272)
T PRK08589 84 DVLFNNAG 91 (272)
T ss_pred CEEEECCC
Confidence 99999886
No 234
>PRK09242 tropinone reductase; Provisional
Probab=97.91 E-value=7.1e-05 Score=55.99 Aligned_cols=81 Identities=21% Similarity=0.295 Sum_probs=55.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCCe---eEecCCCccHHHHHHhHC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEPDLDAALKRYF--PE 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~~~~~--~~ 87 (208)
.|.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++ +... ..|..+...+...+.+.. -+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999889999999999887765554332 2211 234443322333333322 13
Q ss_pred CccEEEeCCCc
Q 028523 88 GINIYFENVGG 98 (208)
Q Consensus 88 ~~d~v~d~~g~ 98 (208)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 69999999873
No 235
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.91 E-value=9.9e-05 Score=55.83 Aligned_cols=78 Identities=22% Similarity=0.308 Sum_probs=54.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHC--CCCccEEEe
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIYFE 94 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v~d 94 (208)
.++||+||+|++|...++.+...|++|+++++++++.+.+.+..+.. . ..|..+...+.+.+.+.. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999999999999888888999999999988877766344322 1 244444322333333322 136899999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 83 ~ag 85 (276)
T PRK06482 83 NAG 85 (276)
T ss_pred CCC
Confidence 887
No 236
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.91 E-value=9.3e-05 Score=56.08 Aligned_cols=105 Identities=9% Similarity=0.096 Sum_probs=69.9
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
.|++++|+||+ +++|++.++.+...|++|+.+.++++ +.+.+.++++... ..|..+.+.....+.+... ++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47899999997 79999999988889999999988753 3333332455332 3455554234444443322 37
Q ss_pred ccEEEeCCCc-h-----------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523 89 INIYFENVGG-K-----------------------------MLDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 89 ~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
+|+++++.|. . .....++.|..+|+++.++...+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 9999999872 1 02445667777899998876543
No 237
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.90 E-value=8.2e-05 Score=55.34 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=53.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
.+.+++|+||+|++|...++.+...|++|+.+.++++..+.+.+++ +.. . ..|..+...+...+.+.. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999888888999999998876654443232 211 1 234443312222222221 1269
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 85 d~vi~~ag 92 (250)
T PRK07774 85 DYLVNNAA 92 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 238
>PRK08643 acetoin reductase; Validated
Probab=97.90 E-value=6.4e-05 Score=56.19 Aligned_cols=79 Identities=15% Similarity=0.200 Sum_probs=53.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
+++++|+||+|++|...++.+...|++|+.+++++++.+.+.+++ +... ..|..+.+.+.+.+.+... +++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999999999999999998888999999999887665544332 2221 2344443233333333321 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|.+.|
T Consensus 82 ~vi~~ag 88 (256)
T PRK08643 82 VVVNNAG 88 (256)
T ss_pred EEEECCC
Confidence 9999886
No 239
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.90 E-value=0.00026 Score=50.76 Aligned_cols=77 Identities=19% Similarity=0.252 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC----CCe-eEecCCCccHHHHHHhHCCCCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEPDLDAALKRYFPEGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~~~~~~~~d~v 92 (208)
++.+++|+||+|++|...++.+...|++|+++.++.++.+.+.+.++ ... ..+..+.++..+.+. ++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence 56899999999999999888888888999999999887766653442 221 222222112222222 48999
Q ss_pred EeCCCch
Q 028523 93 FENVGGK 99 (208)
Q Consensus 93 ~d~~g~~ 99 (208)
|.+++..
T Consensus 102 i~at~~g 108 (194)
T cd01078 102 FAAGAAG 108 (194)
T ss_pred EECCCCC
Confidence 9988843
No 240
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.89 E-value=9.3e-05 Score=55.43 Aligned_cols=80 Identities=21% Similarity=0.336 Sum_probs=54.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.++||+||+|++|...++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+.+.+.+... +++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999888889999999999887766554332 221 12344443233333333221 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|.+|.+.|
T Consensus 91 d~vi~~ag 98 (259)
T PRK08213 91 DILVNNAG 98 (259)
T ss_pred CEEEECCC
Confidence 99999887
No 241
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.88 E-value=9.1e-05 Score=55.31 Aligned_cols=80 Identities=18% Similarity=0.372 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.++||+||++++|...++.+...|++|+.+++++++.+.+.+++ +.. . ..|..+.+.+.+.+..... +++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4778999999999999999888888999999998877665543233 221 1 2344433223333333221 369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++.+.|
T Consensus 88 d~vi~~ag 95 (254)
T PRK08085 88 DVLINNAG 95 (254)
T ss_pred CEEEECCC
Confidence 99999887
No 242
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00011 Score=54.08 Aligned_cols=80 Identities=6% Similarity=0.142 Sum_probs=54.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhH---CCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRY---FPEG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~---~~~~ 88 (208)
+|.+++|+||++++|.+.++.+...|++|+.+.+++++.+.+.++ .+... ..|..+.+++.+.+.+. .+++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999988888999999999988876554322 34321 23433332333333332 2226
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 243
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00012 Score=54.50 Aligned_cols=80 Identities=14% Similarity=0.198 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
++.+++|+||+|++|...++.+...|++|+.++++.++.+...+.+ +.. . ..|..+.....+.+..... +++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999999999999999888788999999999887665544333 221 1 2344433123333333221 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
+++.+.|
T Consensus 84 ~vi~~ag 90 (252)
T PRK06138 84 VLVNNAG 90 (252)
T ss_pred EEEECCC
Confidence 9999887
No 244
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00011 Score=54.69 Aligned_cols=79 Identities=16% Similarity=0.285 Sum_probs=53.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+...+...+.+... ++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999988888788999999999988766554222 211 1 2355443233333333322 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999886
No 245
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.86 E-value=0.00011 Score=55.66 Aligned_cols=80 Identities=11% Similarity=0.145 Sum_probs=53.4
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKDKV---DLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~~~---~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
+++++||+||++ ++|.+.++.+...|++|+++.++++.. +.+.+++|... ..|..+..+..+.+.+... ++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999986 999999999888999999988775432 23322445332 2344443233333443322 37
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|+++++.|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999887
No 246
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.86 E-value=9.2e-05 Score=55.34 Aligned_cols=104 Identities=13% Similarity=0.058 Sum_probs=66.8
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.|++++|+||+ +++|.+.++.+...|++|+.++++++..+.++ ++.... ..|..+..+..+.+.+... +++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999998 79999999888889999999988754333344 432211 2344443233333333322 369
Q ss_pred cEEEeCCCc-h-----------h------------------HHHHHHhhccCCEEEEEecccc
Q 028523 90 NIYFENVGG-K-----------M------------------LDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 90 d~v~d~~g~-~-----------~------------------~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
|+++++.|. . . ....++.|..+|+++.++....
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 999998872 1 0 1334556667799988876543
No 247
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00014 Score=55.12 Aligned_cols=79 Identities=23% Similarity=0.246 Sum_probs=54.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHC--CCCccEEE
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIYF 93 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v~ 93 (208)
+.++||+||+|++|..+++.+...|++|+.+++++++.+.+.+.++.. . ..|..+...+...+.... -+++|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999888888999999999988776665344322 1 234433313333333221 13689999
Q ss_pred eCCC
Q 028523 94 ENVG 97 (208)
Q Consensus 94 d~~g 97 (208)
.+.|
T Consensus 83 ~~ag 86 (275)
T PRK08263 83 NNAG 86 (275)
T ss_pred ECCC
Confidence 9987
No 248
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.86 E-value=5.7e-05 Score=56.92 Aligned_cols=78 Identities=17% Similarity=0.343 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d 94 (208)
.+.+++|+||+|++|...++.+...|++|+++++++++.+... +.. ...|..+..++...+..... +++|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999999999999999888888999999998876543221 222 23455554234444443322 36999999
Q ss_pred CCCc
Q 028523 95 NVGG 98 (208)
Q Consensus 95 ~~g~ 98 (208)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9883
No 249
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.0001 Score=55.34 Aligned_cols=79 Identities=19% Similarity=0.324 Sum_probs=52.8
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
+.++||+||+|++|..+++.+...|++|+.+++++++.+.+.+. .+... ..|..+...+...+..... +++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35799999999999999998888999999999987765544322 23221 2344433233333333321 2689
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
.+|.+.|
T Consensus 81 ~vi~~ag 87 (263)
T PRK06181 81 ILVNNAG 87 (263)
T ss_pred EEEECCC
Confidence 9999986
No 250
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.85 E-value=0.00013 Score=54.46 Aligned_cols=79 Identities=16% Similarity=0.270 Sum_probs=52.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
+|.+++|+||++++|.+.++.+...|++|+++.+++.. .+.++ +.+... ..|..+..++.+.+.+... +++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999988899999988865432 22233 444321 2455444234333433321 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
+++++.|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999887
No 251
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00011 Score=54.81 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.+++|+||+|++|...++.+...|++|+.++++.++.+.+.+++ +.. . ..|..+..+....+.+... +++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999889999999998877665544332 321 1 2344433223333333222 258
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++++.|
T Consensus 87 d~li~~ag 94 (252)
T PRK07035 87 DILVNNAA 94 (252)
T ss_pred CEEEECCC
Confidence 99998887
No 252
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00014 Score=54.95 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC-----CC-ee--EecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG-----FD-EA--FNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~~~~~~~--~ 87 (208)
++.++||+|++|++|...++.+...|++|+.+++++++.+...+++. .. .+ .|..+..++...+.+... +
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999998899999999988776544432321 11 12 244333233333333322 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|++|.+.|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 253
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00034 Score=51.79 Aligned_cols=104 Identities=16% Similarity=0.107 Sum_probs=63.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-ee--EecCCCccHHHHHHhHC--CCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-EA--FNYKEEPDLDAALKRYF--PEG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~--~~~ 88 (208)
++.+++|+||+|++|...++.+...|++++.+.++.. ..+.+.+ +.+.. .. .|..+...+.+.+.+.. -++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999889999888776533 2222221 23332 12 23333322333333321 136
Q ss_pred ccEEEeCCCch-----------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523 89 INIYFENVGGK-----------M---------------LDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 89 ~d~v~d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+|++|.+.|.. . ...+++.++.+|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 89999988731 0 223445556678999887644
No 254
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00013 Score=53.95 Aligned_cols=81 Identities=14% Similarity=0.246 Sum_probs=54.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
.++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.++....+..... ++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45678999999999999999999889999999999887765554222 221 1 2344433223333333221 26
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|.++.+.|
T Consensus 84 id~lv~~ag 92 (241)
T PRK07454 84 PDVLINNAG 92 (241)
T ss_pred CCEEEECCC
Confidence 999999887
No 255
>PRK07985 oxidoreductase; Provisional
Probab=97.84 E-value=0.00023 Score=54.45 Aligned_cols=105 Identities=12% Similarity=0.093 Sum_probs=65.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~ 87 (208)
++.+++|+||++++|...++.+...|++|+++.++. +..+.+.+ +.|... ..|..+.+.+...+.+... +
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999998888899999877542 23333321 233321 2344443233333333322 3
Q ss_pred CccEEEeCCCc-h--------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523 88 GINIYFENVGG-K--------------------------MLDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 88 ~~d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
++|+++.+.|. . ....+++.|+.+|+++.++....
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 68999988762 1 02344455667899999877543
No 256
>PRK06720 hypothetical protein; Provisional
Probab=97.83 E-value=0.00021 Score=50.03 Aligned_cols=80 Identities=14% Similarity=0.255 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe-e--EecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
++..++|+||++++|...+..+...|++|++++++++..+...++ .+... . .|..+..++.+.+.+.. -+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999988888899999999887765443223 24321 2 23332212222222211 1368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++++.|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 99998887
No 257
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.83 E-value=9.8e-05 Score=55.07 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
++.+++|+||+|++|...++.+...|++|+.+++++++.+.+.+ +.+.. . ..|..+..++...+.+.. -+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888889999999999876554432 23322 1 234433312333333221 1368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++.+.|
T Consensus 86 d~li~~ag 93 (253)
T PRK06172 86 DYAFNNAG 93 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 258
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.83 E-value=0.00015 Score=54.99 Aligned_cols=80 Identities=14% Similarity=0.250 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++ +.. . ..|..+...+...+.+... +++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999999999999999998889999999998877655443232 322 1 2334333123333333221 369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999877
No 259
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00022 Score=52.71 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CC-C---eeEecCCC--cc---HHHHHHhHC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GF-D---EAFNYKEE--PD---LDAALKRYF 85 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~-~---~v~~~~~~--~~---~~~~~~~~~ 85 (208)
++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++ +. . ..+|..+. .+ +.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4679999999999999999888888999999999988765543332 21 1 12333221 02 222333333
Q ss_pred CCCccEEEeCCC
Q 028523 86 PEGINIYFENVG 97 (208)
Q Consensus 86 ~~~~d~v~d~~g 97 (208)
.+.+|.+|.+.|
T Consensus 85 ~~~id~vi~~ag 96 (239)
T PRK08703 85 QGKLDGIVHCAG 96 (239)
T ss_pred CCCCCEEEEecc
Confidence 246899999887
No 260
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.83 E-value=4.9e-05 Score=61.71 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=63.6
Q ss_pred cCCCCCCEEE----EecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCC
Q 028523 14 CSPKQGEYVF----VSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 14 ~~~~~g~~vl----i~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~ 88 (208)
.++++|+.+| |+||+|++|.+++|+++..|++|+.+.+++.+....+ ..+.. .++|.+.. ...+.+...
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~---- 102 (450)
T PRK08261 29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKAL---- 102 (450)
T ss_pred cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHH----
Confidence 4667899988 9999999999999999999999999886655333222 23333 35555544 333333221
Q ss_pred ccEEEeCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523 89 INIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 89 ~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
...+...++.|.++|+++.++...
T Consensus 103 ---------~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 ---------YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ---------HHHHHHHHHhccCCCEEEEEcccc
Confidence 134566777888888888887654
No 261
>PRK04148 hypothetical protein; Provisional
Probab=97.82 E-value=0.00029 Score=46.95 Aligned_cols=51 Identities=18% Similarity=0.121 Sum_probs=39.4
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA 68 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v 68 (208)
...++.++++.|. | .|...++.+...|.+|++++.+++..+.++ +.+...+
T Consensus 13 ~~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v 63 (134)
T PRK04148 13 EKGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAF 63 (134)
T ss_pred ccccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEE
Confidence 3445788999994 6 787666666678999999999999988888 6665443
No 262
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.82 E-value=0.00011 Score=54.30 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.+++|+|++|++|...+..+...|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+++... +++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3678999999999999999888888999999999877655443222 221 1 2233333133333333321 269
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|.+|.+.|
T Consensus 86 d~vi~~ag 93 (239)
T PRK07666 86 DILINNAG 93 (239)
T ss_pred cEEEEcCc
Confidence 99999886
No 263
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00022 Score=53.47 Aligned_cols=78 Identities=21% Similarity=0.341 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-ee--EecCCCccHHHHHHhHCCCCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-EA--FNYKEEPDLDAALKRYFPEGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~~~~~~~~~~d 90 (208)
++.+++|+|+++++|...++.+...|++|+++++++++.+.+.+++ +.. .. .|..+...+.+.+... +++|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 4789999999999999999988889999999999888766544333 221 12 3333331232223221 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|++.|
T Consensus 84 ~lv~~ag 90 (259)
T PRK06125 84 ILVNNAG 90 (259)
T ss_pred EEEECCC
Confidence 9999887
No 264
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.81 E-value=0.00011 Score=55.06 Aligned_cols=78 Identities=18% Similarity=0.284 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHhcCC--CeeEecCCCccHHH---HHHhHCCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD----LLKNKFGF--DEAFNYKEEPDLDA---ALKRYFPEG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~----~~~~~~g~--~~v~~~~~~~~~~~---~~~~~~~~~ 88 (208)
+|+.|||+||++|+|.+.++=....|++++..+.+.+... .++ +.|- ..+.|.++.++... ++++-.+ .
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G-~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVG-D 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcC-C
Confidence 6899999999999999888777778888888887766443 333 3342 23566665434333 3333333 6
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++++.+|
T Consensus 115 V~ILVNNAG 123 (300)
T KOG1201|consen 115 VDILVNNAG 123 (300)
T ss_pred ceEEEeccc
Confidence 999999887
No 265
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.80 E-value=0.00012 Score=54.90 Aligned_cols=80 Identities=18% Similarity=0.274 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe---eEecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
++.++||+||+|++|..+++.+...|++|+++++++++.+.+.++ .+... ..|..+...+.+.+.... .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999988999999999988765544323 34322 124333312333333221 1368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 86 d~vi~~ag 93 (262)
T PRK13394 86 DILVSNAG 93 (262)
T ss_pred CEEEECCc
Confidence 99999887
No 266
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.0002 Score=53.51 Aligned_cols=79 Identities=19% Similarity=0.252 Sum_probs=53.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC--e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
+.+++|+||+|++|...+..+...|++|+++++++++.+.+.+.+... . ..|..+...+...+.+... +++|.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999888888999999999888766555344211 1 2344433122223332211 268999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+.+.|
T Consensus 82 i~~ag 86 (257)
T PRK07074 82 VANAG 86 (257)
T ss_pred EECCC
Confidence 99987
No 267
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.80 E-value=0.00018 Score=55.63 Aligned_cols=79 Identities=11% Similarity=0.157 Sum_probs=54.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCC----e--eEecCCCccHHHHHHhHC--CCCc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFD----E--AFNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~----~--v~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
+.+++|+||++++|...++.+...| ++|+.+++++++.+.+.++++.. . ..|..+..+....+.+.. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999988888889 89999999888766555455321 1 234444323333333332 2369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 83 D~lI~nAG 90 (314)
T TIGR01289 83 DALVCNAA 90 (314)
T ss_pred CEEEECCC
Confidence 99999876
No 268
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.80 E-value=0.00019 Score=54.12 Aligned_cols=84 Identities=20% Similarity=0.213 Sum_probs=60.3
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee---EecCCC--cc---HHHHHHhHC-
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA---FNYKEE--PD---LDAALKRYF- 85 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v---~~~~~~--~~---~~~~~~~~~- 85 (208)
+.++..+|+|+|+|+++|++.+.-++..|++|.++.++.+++..+++.++.... +.+... .+ ....++...
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 345567999999999999999999999999999999999999988877765321 112211 01 222333332
Q ss_pred -CCCccEEEeCCCc
Q 028523 86 -PEGINIYFENVGG 98 (208)
Q Consensus 86 -~~~~d~v~d~~g~ 98 (208)
.+.+|.+|.|.|.
T Consensus 109 ~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGV 122 (331)
T ss_pred ccCCcceEEEecCc
Confidence 2368999999984
No 269
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.80 E-value=0.00087 Score=48.64 Aligned_cols=103 Identities=14% Similarity=0.163 Sum_probs=74.8
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCC-CccHHHHHHhHC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKE-EPDLDAALKRYF 85 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~-~~~~~~~~~~~~ 85 (208)
..++.....+||=+| +.+|..++.+|..+. .+++.+.+++++.+.+++ +.|.+..+.--. . +..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence 345667888899888 678999999999886 489999999998877764 456654221111 3 5556666533
Q ss_pred CCCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 028523 86 PEGINIYFENVG-G---KMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 86 ~~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~ 117 (208)
.+.||.||-=.. + +.++.+++.|++||-++.-
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 458999986554 2 3789999999999998763
No 270
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.79 E-value=0.00021 Score=52.80 Aligned_cols=81 Identities=21% Similarity=0.303 Sum_probs=54.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e--EecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-A--FNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.++||+||+|++|...++.+...|.+|+++++++++.+.+.+ ..+... . .|..+...+...+..... +++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35789999999999999998888889999999998877554432 233322 2 344443233333333221 268
Q ss_pred cEEEeCCCc
Q 028523 90 NIYFENVGG 98 (208)
Q Consensus 90 d~v~d~~g~ 98 (208)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998863
No 271
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=0.0002 Score=53.79 Aligned_cols=80 Identities=13% Similarity=0.199 Sum_probs=52.5
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
.|..++|+||++ ++|.+.++.+...|++|+.++++++ ..+.+.+++|... ..|..+..+..+.+.+... ++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578899999987 8999999888888999999887642 2233332334322 2455554234444443322 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|+++++.|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999876
No 272
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00044 Score=51.56 Aligned_cols=105 Identities=18% Similarity=0.226 Sum_probs=64.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhc---CCCe---eEecCCCccHHH---HHHh----
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNKF---GFDE---AFNYKEEPDLDA---ALKR---- 83 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~---~~~~---- 83 (208)
.+.+++|+||++++|.+.++.+...|++|+++. +++++.+.+.+++ +... ..|..+..+... .+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999999999989999998864 4445443332122 2211 123332212222 2222
Q ss_pred HCC-CCccEEEeCCCc-h--h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523 84 YFP-EGINIYFENVGG-K--M-----------------------LDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 84 ~~~-~~~d~v~d~~g~-~--~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
..+ +++|+++++.|. . . ...+++.|...|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 112 269999998872 1 0 1235556667799999887654
No 273
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00019 Score=53.66 Aligned_cols=80 Identities=21% Similarity=0.213 Sum_probs=51.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++.+++|+||++++|..+++.+...|++|++++++.+ ..+.+.+ ..+.. . ..|..+.....+.+.+... ++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999889999999987653 2222221 23322 1 2344333233333333222 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|++.|
T Consensus 87 id~li~~ag 95 (254)
T PRK06114 87 LTLAVNAAG 95 (254)
T ss_pred CCEEEECCC
Confidence 899999987
No 274
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.77 E-value=0.00019 Score=54.34 Aligned_cols=106 Identities=11% Similarity=0.107 Sum_probs=67.9
Q ss_pred CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--
Q 028523 16 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK---DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP-- 86 (208)
Q Consensus 16 ~~~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~-- 86 (208)
.-.+.++||+||+ +++|.+.++.+...|++|+.+.+++ ++.+.+.++++... ..|..+..+..+.+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 4467899999996 7999999998888999999887764 33344433555322 2344443233333333322
Q ss_pred CCccEEEeCCCc-h--------------h---------------HHHHHHhhccCCEEEEEeccc
Q 028523 87 EGINIYFENVGG-K--------------M---------------LDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 87 ~~~d~v~d~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+++|+++++.|. . . ...+++.|..+|+++.++...
T Consensus 87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 369999998862 1 0 133455666689998887654
No 275
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.77 E-value=0.00023 Score=52.67 Aligned_cols=80 Identities=23% Similarity=0.369 Sum_probs=53.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHC--CCCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 92 (208)
++.+++|+||+|++|...++.+...|+.|+...++.++.+.+.+.++.. . ..|..+.+.+.+.+.+.. -+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999999999999888888999988888877766654345432 1 233333212222222221 1369999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|.+.|
T Consensus 85 i~~ag 89 (245)
T PRK12936 85 VNNAG 89 (245)
T ss_pred EECCC
Confidence 99987
No 276
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00016 Score=54.08 Aligned_cols=82 Identities=11% Similarity=0.133 Sum_probs=54.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCY-VVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~-v~~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~ 87 (208)
-++.+++|+||+|++|..+++.+...|++ |+++++++++.+...+ ..+... .+|..+.+.+.+.+..... +
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35788999999999999999999889997 9999988765543221 334321 2344443223333332211 2
Q ss_pred CccEEEeCCCc
Q 028523 88 GINIYFENVGG 98 (208)
Q Consensus 88 ~~d~v~d~~g~ 98 (208)
++|.+|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999873
No 277
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00019 Score=54.73 Aligned_cols=81 Identities=16% Similarity=0.215 Sum_probs=52.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHhc---CCCe---eEecCCCccHHHHH
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK---------DKVDLLKNKF---GFDE---AFNYKEEPDLDAAL 81 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~---------~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~ 81 (208)
-++.+++|+||++++|...++.+...|++|++++++. ++.+.+.+++ |... ..|..+.++..+.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4678999999999999999988888999999887654 4333332233 3221 23444432333333
Q ss_pred HhHCC--CCccEEEeCCC
Q 028523 82 KRYFP--EGINIYFENVG 97 (208)
Q Consensus 82 ~~~~~--~~~d~v~d~~g 97 (208)
.+... +++|++|++.|
T Consensus 84 ~~~~~~~g~id~lv~nAG 101 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAG 101 (286)
T ss_pred HHHHHhcCCCCEEEECCC
Confidence 33322 36999999887
No 278
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.77 E-value=0.00039 Score=52.25 Aligned_cols=108 Identities=19% Similarity=0.242 Sum_probs=74.5
Q ss_pred HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHH
Q 028523 6 AYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALK 82 (208)
Q Consensus 6 A~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~ 82 (208)
++..+.+..++++|+++|=+| .|-|.+++-.|+..|++|++++-|+++.+.+++ +.|...-+...-. ++.+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~rd--- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DYRD--- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-cccc---
Confidence 344555668999999999998 477999999999999999999999998887774 3344311100000 1111
Q ss_pred hHCCCCccEEE-----eCCCc----hhHHHHHHhhccCCEEEEEeccc
Q 028523 83 RYFPEGINIYF-----ENVGG----KMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 83 ~~~~~~~d~v~-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
.. +.||.|+ +.+|. ..+..+.+.|+++|++++.....
T Consensus 134 -~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 134 -FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred -cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 11 1377664 44553 25788999999999998877654
No 279
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00018 Score=53.84 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFD-E--AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
+|.++||+||+|++|...++.+...|++|+++++++++.+...+ +.+.. . ..|..+...+...+.+... +++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 46799999999999999998888889999999988776533331 22332 1 2344433123333333222 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|.+.|
T Consensus 86 ~vi~~ag 92 (258)
T PRK08628 86 GLVNNAG 92 (258)
T ss_pred EEEECCc
Confidence 9999988
No 280
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.76 E-value=0.00025 Score=52.98 Aligned_cols=80 Identities=21% Similarity=0.299 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.+++|+||++++|...++.+...|++|+.+.+++++.+.+.++ .+.. . ..|..+..++...+.+... +++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 588999999999999999988888899999999987765544322 3321 1 2344443233333333322 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|.+|.+.|
T Consensus 90 d~vi~~ag 97 (256)
T PRK06124 90 DILVNNVG 97 (256)
T ss_pred CEEEECCC
Confidence 99999887
No 281
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.76 E-value=0.00038 Score=53.90 Aligned_cols=94 Identities=16% Similarity=0.207 Sum_probs=61.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVGGK 99 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 99 (208)
+|+|+||+|-+|...++.+...|.+|++.+|+.++...+. ..+...+ .|..+...+.+.+ . ++|.||++.+..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al----~-g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF----K-GVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH----C-CCCEEEECCCCC
Confidence 6999999999999999988888999999999877655554 4454322 2333321222222 2 589999986521
Q ss_pred -----h--------HHHHHHhhccCC--EEEEEecc
Q 028523 100 -----M--------LDAVLLNMRIQG--RITLCGMI 120 (208)
Q Consensus 100 -----~--------~~~~~~~l~~~G--~~v~~g~~ 120 (208)
. ....++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0 123344444433 78887764
No 282
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00056 Score=52.27 Aligned_cols=105 Identities=15% Similarity=0.170 Sum_probs=64.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++.++||+||+|++|...++.+...|++|+++.++.+ ..+.+.+ ..|... ..|..+...+.+.+.+... ++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999888888999999887643 2222221 223321 2344333123333333221 26
Q ss_pred ccEEEeCCCch----h-----------------------HHHHHHhhccCCEEEEEecccc
Q 028523 89 INIYFENVGGK----M-----------------------LDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 89 ~d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
+|++|.+.|.. . ...+++.++++|+++.++....
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~ 185 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG 185 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 89999887631 0 1233445666789999887543
No 283
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.76 E-value=7.9e-05 Score=51.84 Aligned_cols=78 Identities=17% Similarity=0.267 Sum_probs=49.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHh---cCCC-ee--EecCCCccHHHHHHhHC--CCC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGS--KDKVDLLKNK---FGFD-EA--FNYKEEPDLDAALKRYF--PEG 88 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s--~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~--~~~ 88 (208)
++++|+||++++|...++.....|. +|+.+.++ .++.+.+.++ .+.. .+ .|..+..+....+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4789999999999998887777777 78888888 4444444223 3431 12 33333323344444433 226
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|.+.|
T Consensus 81 ld~li~~ag 89 (167)
T PF00106_consen 81 LDILINNAG 89 (167)
T ss_dssp ESEEEEECS
T ss_pred ccccccccc
Confidence 999999887
No 284
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00017 Score=53.77 Aligned_cols=75 Identities=16% Similarity=0.238 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
.+.+++|+||+|++|...++.+...|++|+++++++++ . ..+.. ...|..+..++.+.+..... +++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999888899999999987654 1 22221 12344443233333333221 368999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|.+.|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99887
No 285
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.74 E-value=0.00027 Score=52.83 Aligned_cols=79 Identities=11% Similarity=0.193 Sum_probs=52.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP--EGINIYF 93 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~d~v~ 93 (208)
.+.+++|+||+|++|...++.+...|++|+++.++. +..+.++ ..+... ..|..+.....+.+..... +++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468899999999999999998888899998876543 3344444 333322 3454443233333333322 3699999
Q ss_pred eCCC
Q 028523 94 ENVG 97 (208)
Q Consensus 94 d~~g 97 (208)
.+.|
T Consensus 85 ~~ag 88 (255)
T PRK06463 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 9886
No 286
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.74 E-value=0.00029 Score=52.98 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.+++|+|+++++|...+..+...|++|+++.+++++.+.+.+.+ |... ..|..+.......+.+... +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5678999999999999988888888999999998887665443232 3321 2344433123333333221 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|.++.+.|
T Consensus 89 d~li~~ag 96 (265)
T PRK07097 89 DILVNNAG 96 (265)
T ss_pred CEEEECCC
Confidence 99999887
No 287
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.74 E-value=0.00049 Score=52.87 Aligned_cols=38 Identities=11% Similarity=0.209 Sum_probs=32.3
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 028523 18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDKV 56 (208)
Q Consensus 18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~~~~ 56 (208)
.|+++||+|| ++|+|.+.++.+...|++|++ ++..+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 5889999999 799999999999999999988 5454443
No 288
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.73 E-value=0.0002 Score=53.68 Aligned_cols=80 Identities=15% Similarity=0.245 Sum_probs=52.7
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSK--DKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~--~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
.+.+++|+|+ ++++|.+.++.+...|++|+.++++. +..+.+.++++.. ...|..+.....+.+.+... ++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 89999999988888999999988653 3344444345432 12344443233333333222 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|+++++.|
T Consensus 86 iD~li~nAG 94 (256)
T PRK07889 86 LDGVVHSIG 94 (256)
T ss_pred CcEEEEccc
Confidence 999999886
No 289
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00047 Score=51.37 Aligned_cols=73 Identities=23% Similarity=0.382 Sum_probs=48.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
.+.+++|+||+|++|...++.+...|++|+++++++. ..+... . +... ..|..+. . .+.+.. +++|++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~-~~~~~~~~D~~~~---~-~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E-SPNEWIKWECGKE---E-SLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c-CCCeEEEeeCCCH---H-HHHHhc-CCCCEEEE
Confidence 4689999999999999999988889999999998762 222111 1 1112 2344332 2 233322 25999999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 86 nAG 88 (245)
T PRK12367 86 NHG 88 (245)
T ss_pred CCc
Confidence 987
No 290
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.73 E-value=0.00016 Score=54.09 Aligned_cols=79 Identities=16% Similarity=0.230 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.++||+||++++|...++.+...|++|++++++ ++.+.+.+ +.+.. . ..|..+.......+.+... +++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999998899999999877 33333321 33332 1 2344443223333333221 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++.+.|
T Consensus 93 d~li~~ag 100 (258)
T PRK06935 93 DILVNNAG 100 (258)
T ss_pred CEEEECCC
Confidence 99999877
No 291
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.72 E-value=0.00046 Score=51.11 Aligned_cols=79 Identities=23% Similarity=0.355 Sum_probs=50.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
+.++||+||+|++|...+..+...|++|+++ .+++++.+.+.+.+ +.. . ..|..+...+.+.+..... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999988877789999998 87776654443222 221 1 2234333123333332221 269
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|.+|.+.|
T Consensus 85 d~vi~~ag 92 (247)
T PRK05565 85 DILVNNAG 92 (247)
T ss_pred CEEEECCC
Confidence 99999876
No 292
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.72 E-value=0.00028 Score=52.95 Aligned_cols=80 Identities=11% Similarity=0.256 Sum_probs=51.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh----cCCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK----FGFD-E--AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~~~~~~~--~ 87 (208)
++++++|+||++++|...++.+...|++|+.+.+ ++++.+.+.++ .+.. . .+|..+.+++.+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999988889999988764 34443332212 2332 1 2344443233333333322 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|+++++.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6999999875
No 293
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00063 Score=50.70 Aligned_cols=80 Identities=18% Similarity=0.207 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC-----
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF----- 85 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~----- 85 (208)
.+.+++|+||+|++|...++.+...|++|++. .++.++.+...+.+ +.. . ..|..+..++...+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 35789999999999999999888889988764 56665544333232 221 1 234444323333333321
Q ss_pred --C-CCccEEEeCCC
Q 028523 86 --P-EGINIYFENVG 97 (208)
Q Consensus 86 --~-~~~d~v~d~~g 97 (208)
+ +++|++|.+.|
T Consensus 85 ~~~~~~id~vi~~ag 99 (254)
T PRK12746 85 RVGTSEIDILVNNAG 99 (254)
T ss_pred ccCCCCccEEEECCC
Confidence 1 26899999887
No 294
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.71 E-value=0.0002 Score=53.51 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.+++|+||++++|...++.+...|++++.++++.+..+.+.++ .+.. . ..|..+.++..+.+..... +++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999998888899999999887765544322 2322 1 2444443233333333222 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++.+.|
T Consensus 90 d~li~~ag 97 (255)
T PRK06113 90 DILVNNAG 97 (255)
T ss_pred CEEEECCC
Confidence 99999887
No 295
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.71 E-value=0.001 Score=49.50 Aligned_cols=104 Identities=16% Similarity=0.185 Sum_probs=64.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHhcCCC-e--eEecCCCccHHHHHHhHCC--C
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVD----LLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~----~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~ 87 (208)
.+.++||+||+|++|...++-+...|++++...++ .++.. .++ ..+.. . ..|..+...+...+.+... +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 36789999999999999998888899998777643 22222 222 33332 1 2344443223333333221 3
Q ss_pred CccEEEeCCCc-h-------------------------hHHHHHHhhccCCEEEEEecccc
Q 028523 88 GINIYFENVGG-K-------------------------MLDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 88 ~~d~v~d~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
++|.+|.+.|. . ..+.+.+.++..|+++.++....
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 68999998872 1 02334556667789999887654
No 296
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.70 E-value=0.00055 Score=53.90 Aligned_cols=95 Identities=16% Similarity=0.104 Sum_probs=67.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcC---C-CeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFG---F-DEAFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
.+|||.|+ |+||+.+++.+.+.+ .+|++.+|+.++++.+. ... . ...+|-.+.+...+.++ ++|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence 46899996 999999999988888 69999999999999887 443 2 13555554323333343 2699999
Q ss_pred CCCchhHHHHH-HhhccCCEEEEEeccc
Q 028523 95 NVGGKMLDAVL-LNMRIQGRITLCGMIS 121 (208)
Q Consensus 95 ~~g~~~~~~~~-~~l~~~G~~v~~g~~~ 121 (208)
+.+...-...+ .|++.|=.++.+....
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEcccCC
Confidence 99965444444 5666666777776544
No 297
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.70 E-value=0.00042 Score=51.40 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=49.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHH-HHHHH--hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKV-DLLKN--KFGFDE---AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~-~~~~~--~~g~~~---v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++..++|+|++|++|...++.+...|++|++..+ ++.+. +.+.+ ..+... ..|..+..++.+.+.+... ++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999889999887553 23322 22220 234332 1344433223333333221 36
Q ss_pred ccEEEeCCCc
Q 028523 89 INIYFENVGG 98 (208)
Q Consensus 89 ~d~v~d~~g~ 98 (208)
+|+++++.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999873
No 298
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.69 E-value=0.00025 Score=53.29 Aligned_cols=80 Identities=6% Similarity=0.173 Sum_probs=51.4
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK---NKFGFDE--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++..++|+|| ++++|.+.++.+...|++|+.+.++++..+.++ +++|... ..|..+.++....+.+... ++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 679999999988889999998876543333332 1334322 2344443234444433322 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|+++++.|
T Consensus 85 iD~lVnnAG 93 (261)
T PRK08690 85 LDGLVHSIG 93 (261)
T ss_pred CcEEEECCc
Confidence 999999886
No 299
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.69 E-value=0.00023 Score=52.84 Aligned_cols=80 Identities=14% Similarity=0.199 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-ee--EecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-EA--FNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
++.++||+||+|++|...++.+...|++|+.++++.++.+.+.+. .+.. .+ .|..+...+.+.+..... +++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468899999999999999998888999999999888776554422 2221 22 333332123333333221 268
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999887
No 300
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00031 Score=52.69 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=51.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--hcCCCe---eEecCCCccHHHHHHhHC--CCCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN--KFGFDE---AFNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~--~~g~~~---v~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
++.+++|+||+|++|...++.+...|++|+.++++++..+.+.+ ..+... ..|..+..++...+.+.. .+++|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46889999999999999999888889999999988753333321 223221 234443312333333222 13689
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|.+.|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999887
No 301
>PRK12743 oxidoreductase; Provisional
Probab=97.68 E-value=0.00032 Score=52.47 Aligned_cols=79 Identities=16% Similarity=0.271 Sum_probs=50.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
+++++|+||++++|..+++.+...|++|+.+.++ .++.+.+.+ ..|.. . ..|..+...+...+.+... +++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998899999887643 333333221 33432 2 2344443223333333222 268
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 82 d~li~~ag 89 (256)
T PRK12743 82 DVLVNNAG 89 (256)
T ss_pred CEEEECCC
Confidence 99999887
No 302
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.68 E-value=0.00023 Score=53.27 Aligned_cols=79 Identities=13% Similarity=0.110 Sum_probs=52.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----cCCC--e--eEecCCCccHHHHHHhHCC--CC
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK----FGFD--E--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~----~g~~--~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++++||+||+|++|...++.+...|++|+.++++..+.+.+.++ .+.. . ..|..+.......+.+... ++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999998888899999999887765444322 2311 1 2243333123333333221 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|.++++.|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999887
No 303
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.68 E-value=0.00036 Score=52.52 Aligned_cols=80 Identities=14% Similarity=0.254 Sum_probs=51.4
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
+|.+++|+||++ ++|.+.++.+...|++|+.+.++++ ..+.+..+.+... ..|..+.+++.+.+.+... ++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 578999999975 8999999888889999998887632 2222321223222 2344443234444443322 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999987
No 304
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.67 E-value=0.0012 Score=50.98 Aligned_cols=100 Identities=18% Similarity=0.255 Sum_probs=68.7
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP 86 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~ 86 (208)
+...++++++||..|+ | .|..++.+++..+. .|++++.+++-.+.+++ ..|.+.+.... . +..+.... .
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-g-D~~~~~~~--~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-G-DGYYGVPE--F 147 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-C-Chhhcccc--c
Confidence 4456889999999994 4 69999999998764 69999999886665553 45654432222 2 32222211 1
Q ss_pred CCccEEEeCCCc-hhHHHHHHhhccCCEEEEE
Q 028523 87 EGINIYFENVGG-KMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 87 ~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 117 (208)
+.+|+|+.+.+. ......++.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 269999998884 4555778899999998764
No 305
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00037 Score=53.66 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=51.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---hcCCCe---eEecCCCccHHHHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----------DKVDLLKN---KFGFDE---AFNYKEEPDLDAAL 81 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----------~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~ 81 (208)
.|.+++|+||++++|.+.++.+...|++|++++++. ++.+.+.+ ..|... ..|..+..+....+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 578999999999999999999988999999998863 23332221 333221 23444432333333
Q ss_pred HhHCC--CCccEEEeCC-C
Q 028523 82 KRYFP--EGINIYFENV-G 97 (208)
Q Consensus 82 ~~~~~--~~~d~v~d~~-g 97 (208)
.+... +++|+++++. |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 33322 3699999987 5
No 306
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.66 E-value=0.0013 Score=45.27 Aligned_cols=100 Identities=19% Similarity=0.238 Sum_probs=62.2
Q ss_pred HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhH
Q 028523 6 AYAGFFEVCS-PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 6 A~~~l~~~~~-~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 84 (208)
.+.++.+..+ .-.|.+++|.| =|-+|.-.++.++.+|++|+++...+-+.-.+. .-|.. +. .+.+.+.
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~-- 77 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR-- 77 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT--
T ss_pred HHHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh--
Confidence 3445544433 45899999999 599999999999999999999998887765554 34542 21 2333322
Q ss_pred CCCCccEEEeCCCchh--HHHHHHhhccCCEEEEEec
Q 028523 85 FPEGINIYFENVGGKM--LDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 85 ~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~ 119 (208)
..|++|.++|... -.+-++.|+++-.+...|.
T Consensus 78 ---~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 78 ---DADIFVTATGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp ---T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred ---hCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence 3799999999643 3577788887766666554
No 307
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.65 E-value=0.00034 Score=51.96 Aligned_cols=82 Identities=11% Similarity=0.140 Sum_probs=53.6
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC--ee--EecCC--CccHHHHHHhHCC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD--EA--FNYKE--EPDLDAALKRYFP 86 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~--~v--~~~~~--~~~~~~~~~~~~~ 86 (208)
..++.+++|+|++|++|...++.+...|++|++++++.++.+.+.++ .+.. .+ .|... ..++.+.+.....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 45788999999999999999988888899999999988765444322 2322 12 23321 1123332222222
Q ss_pred --CCccEEEeCCC
Q 028523 87 --EGINIYFENVG 97 (208)
Q Consensus 87 --~~~d~v~d~~g 97 (208)
+++|.+|.+.+
T Consensus 89 ~~~~id~vi~~Ag 101 (247)
T PRK08945 89 QFGRLDGVLHNAG 101 (247)
T ss_pred HhCCCCEEEECCc
Confidence 26899998876
No 308
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.65 E-value=0.00028 Score=52.99 Aligned_cols=80 Identities=15% Similarity=0.287 Sum_probs=52.0
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAA--SGAVGQLVGQFAKLVGCYVVGSAGS---KDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga--~g~vG~~a~qla~~~g~~v~~~~~s---~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++.+++|+|| ++++|.+.++.+...|++|+.+.+. +++.+.+.++++... ..|..+.++....+..... ++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 5799999998888899999987543 333333332455322 2444444244444444322 37
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|+++++.|
T Consensus 85 iD~lvnnAG 93 (260)
T PRK06997 85 LDGLVHSIG 93 (260)
T ss_pred CcEEEEccc
Confidence 999999876
No 309
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.64 E-value=0.00067 Score=54.32 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=54.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
-.+.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.+. +..+.+. .+|+||.|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence 46789999995 9999999999988997 8999999988877776577622333221 2222222 38999999
Q ss_pred CCch
Q 028523 96 VGGK 99 (208)
Q Consensus 96 ~g~~ 99 (208)
++++
T Consensus 250 T~a~ 253 (414)
T PRK13940 250 VNVL 253 (414)
T ss_pred cCCC
Confidence 9965
No 310
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.64 E-value=0.00038 Score=51.67 Aligned_cols=80 Identities=19% Similarity=0.242 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCC-ee--EecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFD-EA--FNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.+++|+||+|++|...++.+...|++|++++++.++...+.+ ..+.. .+ .|..+...+...+.+... +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999998888889999999998665443321 22221 12 233333123333332221 268
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|.+|.+.+
T Consensus 85 d~vi~~ag 92 (251)
T PRK12826 85 DILVANAG 92 (251)
T ss_pred CEEEECCC
Confidence 99999876
No 311
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.64 E-value=0.00028 Score=53.27 Aligned_cols=81 Identities=20% Similarity=0.348 Sum_probs=56.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC------eeEecCCCccHHH---HHHhH
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEPDLDA---ALKRY 84 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~------~v~~~~~~~~~~~---~~~~~ 84 (208)
-.|..++|+|+++++|.+.+..+...|++|+.+.+++++.+....++ +.. .+.|..+.++..+ ...+.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999998866554332 221 1334443312222 22222
Q ss_pred CCCCccEEEeCCC
Q 028523 85 FPEGINIYFENVG 97 (208)
Q Consensus 85 ~~~~~d~v~d~~g 97 (208)
..+++|+.++..|
T Consensus 86 ~~GkidiLvnnag 98 (270)
T KOG0725|consen 86 FFGKIDILVNNAG 98 (270)
T ss_pred hCCCCCEEEEcCC
Confidence 2447999999877
No 312
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.64 E-value=0.00074 Score=54.29 Aligned_cols=75 Identities=20% Similarity=0.375 Sum_probs=54.9
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
...++++++|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .++.. +..+.+. ++|+||
T Consensus 176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvVi 245 (417)
T TIGR01035 176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIVI 245 (417)
T ss_pred CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEEE
Confidence 3467899999996 9999999999999995 8999999988766444377753 33221 2223222 489999
Q ss_pred eCCCch
Q 028523 94 ENVGGK 99 (208)
Q Consensus 94 d~~g~~ 99 (208)
+|++.+
T Consensus 246 ~aT~s~ 251 (417)
T TIGR01035 246 SSTGAP 251 (417)
T ss_pred ECCCCC
Confidence 999853
No 313
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.63 E-value=0.0018 Score=47.14 Aligned_cols=102 Identities=15% Similarity=0.156 Sum_probs=67.3
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhH
Q 028523 10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~ 84 (208)
+.....++++++||-.| .|.|..+..+++..+ .+|+.++.+++-.+.+++. .|...+ ..... +..... .
T Consensus 68 ~~~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~g-d~~~~~--~ 141 (212)
T PRK13942 68 MCELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVG-DGTLGY--E 141 (212)
T ss_pred HHHHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCC--C
Confidence 33556789999999998 466888888888775 5999999998877766643 343221 11111 111100 0
Q ss_pred CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 028523 85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~ 117 (208)
..++||.|+-... .......++.|++||+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 1237999976554 45567788899999998775
No 314
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.0017 Score=49.19 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=63.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC-CCCccE
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF-PEGINI 91 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~-~~~~d~ 91 (208)
++.++|+|+ |++|..+++.+. .|++|+.+++++++.+.+.+++ |.. . ..|..+.+.+...+.... -+++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357889997 799999888775 7999999999877665443233 322 1 245554423444343331 137999
Q ss_pred EEeCCCc-h---h---------------HHHHHHhhccCCEEEEEeccc
Q 028523 92 YFENVGG-K---M---------------LDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 92 v~d~~g~-~---~---------------~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+|++.|. . . ++.+++.|.++|+++.+++..
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 9999872 1 1 234455666677777776544
No 315
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00061 Score=51.56 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=52.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCe-e--EecCCCccHHHHHHhHC--CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDE-A--FNYKEEPDLDAALKRYF--PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~ 89 (208)
+..+++|+||+|++|...++.+...|++|++++++.++.+.+.+ ..+... . .|..+...+.+.+.+.. -+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999998888889999999988766544332 223321 1 24443322333333321 1368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 89 d~vi~~Ag 96 (274)
T PRK07775 89 EVLVSGAG 96 (274)
T ss_pred CEEEECCC
Confidence 99999887
No 316
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.61 E-value=0.00079 Score=53.77 Aligned_cols=75 Identities=31% Similarity=0.386 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
+|++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.. . ..|..+. +.+.+.. +++|++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~----~~v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE----AALAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH----HHHHHHh-CCCCEEEE
Confidence 5789999999999999999888888999999998876554322121111 1 2343332 2233322 25999999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 252 nAG 254 (406)
T PRK07424 252 NHG 254 (406)
T ss_pred CCC
Confidence 876
No 317
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.61 E-value=0.0012 Score=49.10 Aligned_cols=75 Identities=16% Similarity=0.280 Sum_probs=49.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
++.++||+|++|++|...++.+...|++|++++++. .. ..+.. . ..|..+...+.+.+.+... +++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467899999999999999998888899999999775 22 22221 1 2333333123333333221 368999
Q ss_pred EeCCCc
Q 028523 93 FENVGG 98 (208)
Q Consensus 93 ~d~~g~ 98 (208)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998873
No 318
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00047 Score=52.15 Aligned_cols=79 Identities=22% Similarity=0.331 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HH----HHHHhcCCCe---eEecCCCccHHHHHHh
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-------VD----LLKNKFGFDE---AFNYKEEPDLDAALKR 83 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-------~~----~~~~~~g~~~---v~~~~~~~~~~~~~~~ 83 (208)
++.+++|+||+|++|...++.+...|++|++++++.+. .+ .++ ..+... ..|..+...+...+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence 46789999999999999999888889999999987542 11 122 233321 2444443223333332
Q ss_pred HCC--CCccEEEeCCC
Q 028523 84 YFP--EGINIYFENVG 97 (208)
Q Consensus 84 ~~~--~~~d~v~d~~g 97 (208)
... +++|++|++.|
T Consensus 84 ~~~~~g~id~li~~ag 99 (273)
T PRK08278 84 AVERFGGIDICVNNAS 99 (273)
T ss_pred HHHHhCCCCEEEECCC
Confidence 211 26999999887
No 319
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.60 E-value=0.0018 Score=45.50 Aligned_cols=100 Identities=21% Similarity=0.346 Sum_probs=67.6
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCc
Q 028523 14 CSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGI 89 (208)
Q Consensus 14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~ 89 (208)
..+++|+.++=.|+ +.|..++++++.. ..+||++.++++..+..++ +||.+.+.-. +. +..+.+.+.. .+
T Consensus 30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv-~g-~Ap~~L~~~~--~~ 103 (187)
T COG2242 30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVV-EG-DAPEALPDLP--SP 103 (187)
T ss_pred hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEE-ec-cchHhhcCCC--CC
Confidence 46889998887785 4477778888544 3499999998887665543 6887642211 11 2233333221 59
Q ss_pred cEEEeCCCc---hhHHHHHHhhccCCEEEEEec
Q 028523 90 NIYFENVGG---KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 90 d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~ 119 (208)
|.+|---|. ..++.+|..|+++|++|.-..
T Consensus 104 daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 104 DAIFIGGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 999965552 368999999999999987544
No 320
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00039 Score=52.42 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=50.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCe-e--EecCCCccHHHHHHhHC--CCCccEE
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYF--PEGINIY 92 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~--~~~~d~v 92 (208)
+++|+||+|++|...++.+...|++|+.++++.++.+.+.++ .+... + .|..+..++.+.+.... .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999988888899999999888775544322 23221 2 23333212233222221 1369999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|.+.|
T Consensus 82 I~~ag 86 (270)
T PRK05650 82 VNNAG 86 (270)
T ss_pred EECCC
Confidence 99987
No 321
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.60 E-value=0.0011 Score=48.87 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=71.8
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHHHHHHhHCCCC
Q 028523 13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~~ 88 (208)
....++|++||=.+ +|+|-.+..+++..|- +|++++.|+.-++.++++..- .. +.+-.. +. +.+ .+-+..
T Consensus 46 ~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-dA-e~L-Pf~D~s 119 (238)
T COG2226 46 LLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-DA-ENL-PFPDNS 119 (238)
T ss_pred hhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-ch-hhC-CCCCCc
Confidence 34556899998776 5789999999998875 999999999988877754432 11 211111 11 111 123337
Q ss_pred ccEEEeCCCc-------hhHHHHHHhhccCCEEEEEeccc
Q 028523 89 INIYFENVGG-------KMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 89 ~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
||++..+.|- ..+.++.+.|+|||+++.+....
T Consensus 120 FD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 120 FDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred cCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 9999776652 26899999999999999987754
No 322
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.59 E-value=0.00033 Score=52.17 Aligned_cols=79 Identities=16% Similarity=0.215 Sum_probs=52.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCCcc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
+.++||+|++|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+..++...+.... .+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999999999999999888888999999999887766654322 221 1 234444322333333322 12589
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
.+|.+.+
T Consensus 81 ~vi~~a~ 87 (255)
T TIGR01963 81 ILVNNAG 87 (255)
T ss_pred EEEECCC
Confidence 9998775
No 323
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.59 E-value=0.00048 Score=51.43 Aligned_cols=79 Identities=20% Similarity=0.312 Sum_probs=50.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
.|.+++|+|+++++|.+.++.+...|++|+.++++.. ..+.+. +.+.. . ..|..+..+....+.+... +++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999889999998775432 223333 34432 1 2233332123333333222 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
+++++.|
T Consensus 88 ~li~~Ag 94 (253)
T PRK08993 88 ILVNNAG 94 (253)
T ss_pred EEEECCC
Confidence 9999887
No 324
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00032 Score=51.63 Aligned_cols=74 Identities=23% Similarity=0.213 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCccHHHHHHhHCCC-CccEEEeC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPE-GINIYFEN 95 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~ 95 (208)
.+.+++|+||+|++|...++.+...|++|+.+.++.++ . +.. ....|..+...+...+.+.... ++|.+|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 35789999999999999999888899999999987654 1 111 1234444432333334433332 68999998
Q ss_pred CC
Q 028523 96 VG 97 (208)
Q Consensus 96 ~g 97 (208)
.|
T Consensus 76 ag 77 (234)
T PRK07577 76 VG 77 (234)
T ss_pred CC
Confidence 87
No 325
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.57 E-value=0.00053 Score=49.66 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=65.9
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCee-EecCCCccHHHHHHh
Q 028523 10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEPDLDAALKR 83 (208)
Q Consensus 10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~ 83 (208)
+.+...+++|++||-.| +|.|..++-+++..|. +|+.+.+.++-.+.+++ .+|.+.+ +...+. .....+
T Consensus 64 ~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~~ 138 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWPE 138 (209)
T ss_dssp HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTGG
T ss_pred HHHHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhcccc
Confidence 44567799999999998 5678999999998875 68888888775555443 4455432 222221 111111
Q ss_pred HCCCCccEEEeCCCc-hhHHHHHHhhccCCEEEEEec
Q 028523 84 YFPEGINIYFENVGG-KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 84 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~ 119 (208)
.++||.|+-+.+- ..-...++.|++||+++..-.
T Consensus 139 --~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 139 --EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp --G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred --CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 1279999988884 444678889999999988533
No 326
>PRK05599 hypothetical protein; Provisional
Probab=97.57 E-value=0.00044 Score=51.47 Aligned_cols=76 Identities=13% Similarity=0.165 Sum_probs=50.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCC--e--eEecCCCccHHHHHHhHCC--CCccE
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFD--E--AFNYKEEPDLDAALKRYFP--EGINI 91 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~--~--v~~~~~~~~~~~~~~~~~~--~~~d~ 91 (208)
+++|+||++++|.+.++... .|++|+.+.+++++.+.+.+++ |.. . .+|..+.+...+.+.+... +++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 58999999999998887665 4999999999988776554333 322 1 2344444233333333222 36999
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
++.+.|
T Consensus 81 lv~nag 86 (246)
T PRK05599 81 AVVAFG 86 (246)
T ss_pred EEEecC
Confidence 998877
No 327
>PLN02476 O-methyltransferase
Probab=97.57 E-value=0.0021 Score=48.49 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=71.8
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC
Q 028523 11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF 85 (208)
Q Consensus 11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~ 85 (208)
..+.+..+.++||=.| +++|..++.+++.++ .+|+.+..+++..+.+++ +.|...-+..... +..+.+.++.
T Consensus 111 ~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~ 187 (278)
T PLN02476 111 AMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMI 187 (278)
T ss_pred HHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHH
Confidence 3445667789999988 577888899998774 489999999988777764 3465433333333 4445554432
Q ss_pred ----CCCccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 028523 86 ----PEGINIYFENVGG----KMLDAVLLNMRIQGRITL 116 (208)
Q Consensus 86 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 116 (208)
.+.||.||--... +.++.+++.|++||.++.
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 2379999865552 257889999999999875
No 328
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.57 E-value=0.00041 Score=52.03 Aligned_cols=105 Identities=11% Similarity=0.106 Sum_probs=65.6
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCC-
Q 028523 18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSK------DKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFP- 86 (208)
Q Consensus 18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~------~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~- 86 (208)
.|++++|+||+ +++|.+.++.+...|++|+++.++. +..+.+.++.+... ..|..+.+...+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 7999999988888999998876432 22333331222111 2454444234433433322
Q ss_pred -CCccEEEeCCCc--------hh----------------------HHHHHHhhccCCEEEEEecccc
Q 028523 87 -EGINIYFENVGG--------KM----------------------LDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 87 -~~~d~v~d~~g~--------~~----------------------~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
+++|+++++.|. +. .+..++.|..+|+++.++...+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 369999998872 10 2345667777899998876543
No 329
>PLN00015 protochlorophyllide reductase
Probab=97.55 E-value=0.00049 Score=53.06 Aligned_cols=75 Identities=12% Similarity=0.147 Sum_probs=51.6
Q ss_pred EEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCC--e----eEecCCCccHHHHHHhHCC--CCccEEE
Q 028523 23 FVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFD--E----AFNYKEEPDLDAALKRYFP--EGINIYF 93 (208)
Q Consensus 23 li~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~--~----v~~~~~~~~~~~~~~~~~~--~~~d~v~ 93 (208)
+|+||++++|...++.+...| ++|+.+++++++.+.+.++++.. . .+|..+.+.+.+.+.+... +++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999988888889 89999999888766555455321 1 2455544233333433322 3699999
Q ss_pred eCCC
Q 028523 94 ENVG 97 (208)
Q Consensus 94 d~~g 97 (208)
++.|
T Consensus 81 nnAG 84 (308)
T PLN00015 81 CNAA 84 (308)
T ss_pred ECCC
Confidence 9887
No 330
>PRK05855 short chain dehydrogenase; Validated
Probab=97.55 E-value=0.00037 Score=58.24 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.++||+||+|++|...++.+...|++|++++++.++.+.+.+. .|.. . ..|..+.....+.+.+... +++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999999999988888999999999998776654422 2332 1 2455544233333333322 369
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 394 d~lv~~Ag 401 (582)
T PRK05855 394 DIVVNNAG 401 (582)
T ss_pred cEEEECCc
Confidence 99999987
No 331
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.54 E-value=0.00091 Score=49.94 Aligned_cols=101 Identities=17% Similarity=0.102 Sum_probs=62.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-CCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF-GFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~-g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
.+.+|+|+||+|.+|..+++.+...|.+|++..+++++........ +... ..|..+. . +.+.+....++|+||.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~-~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--S-DKLVEAIGDDSDAVICA 92 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--H-HHHHHHhhcCCCEEEEC
Confidence 4678999999999999999888888999999998887654432111 1211 2344331 1 22222222269999988
Q ss_pred CCch--------------hHHHHHHhhcc--CCEEEEEeccc
Q 028523 96 VGGK--------------MLDAVLLNMRI--QGRITLCGMIS 121 (208)
Q Consensus 96 ~g~~--------------~~~~~~~~l~~--~G~~v~~g~~~ 121 (208)
.|.. .....++.+.. .++++.++...
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 7631 12334444443 36888877653
No 332
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.54 E-value=0.0011 Score=50.39 Aligned_cols=93 Identities=14% Similarity=0.130 Sum_probs=60.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
..+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. +. +..+.+ ..+|+||+|
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence 45778999996 999999999999999 5999999999888777645543211111 00 111111 258999999
Q ss_pred CCchhH------HHHHHhhccCCEEEEE
Q 028523 96 VGGKML------DAVLLNMRIQGRITLC 117 (208)
Q Consensus 96 ~g~~~~------~~~~~~l~~~G~~v~~ 117 (208)
++.... ......+.++..++.+
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~~~v~Di 220 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPGTIVYDM 220 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence 873321 1123566666666655
No 333
>PRK09135 pteridine reductase; Provisional
Probab=97.54 E-value=0.00057 Score=50.68 Aligned_cols=80 Identities=9% Similarity=0.120 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHh---cCCC--e--eEecCCCccHHHHHHhHC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKNK---FGFD--E--AFNYKEEPDLDAALKRYF--PE 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~~---~g~~--~--v~~~~~~~~~~~~~~~~~--~~ 87 (208)
.+.++||+||+|++|..+++.+...|++|++++++. ++.+.+.+. .+.. . ..|..+.+.+...+.... -+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999888888899999999763 333332211 1111 1 234444322333333221 12
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|++|.+.|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 334
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.54 E-value=0.0016 Score=47.20 Aligned_cols=103 Identities=12% Similarity=0.132 Sum_probs=65.9
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH
Q 028523 10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~ 84 (208)
+.+...++++++||-.|+ |.|..+..+++..+ .+|+.++.+++-.+.+++ ..+....+..... +..+.+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~-- 138 (205)
T PRK13944 64 MCELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLE-- 138 (205)
T ss_pred HHHhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCc--
Confidence 335567789999998884 66888888888764 599999999887666653 3343211111111 2111111
Q ss_pred CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 028523 85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~ 117 (208)
..+.||.|+-+.. ...-...++.|++||+++..
T Consensus 139 ~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 139 KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1236999987666 34456778899999998764
No 335
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.54 E-value=0.00046 Score=51.29 Aligned_cols=80 Identities=14% Similarity=0.216 Sum_probs=50.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCC-ee--EecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD-EA--FNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++.+++|+||+|++|...++.+...|++|++. .++.++.+.+.+ +.+.. .. .|..+..++...+.+... ++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999998899988764 556555433322 23332 12 343333233333333221 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (250)
T PRK08063 83 LDVFVNNAA 91 (250)
T ss_pred CCEEEECCC
Confidence 899999887
No 336
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00083 Score=50.26 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc---CCC-e--eEecCCCccHHHHHHhHC--CCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF---GFD-E--AFNYKEEPDLDAALKRYF--PEG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~~~~~~--~~~ 88 (208)
.+.++||+||+|++|..+++.+...|++|+.++++ .++.+.+.+++ +.. . ..|..+...+.+.+.+.. .++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999998888899999887654 33433332122 332 1 234444323333333322 136
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|++|.+.|
T Consensus 88 iD~vi~~ag 96 (258)
T PRK09134 88 ITLLVNNAS 96 (258)
T ss_pred CCEEEECCc
Confidence 999999987
No 337
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00063 Score=57.95 Aligned_cols=80 Identities=19% Similarity=0.298 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
.+.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++ +... ..|..+..++.+.+.+... +++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 3678999999999999999888888999999999988766554332 3221 2344443233333333322 269
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+++++.|
T Consensus 450 d~li~~Ag 457 (657)
T PRK07201 450 DYLVNNAG 457 (657)
T ss_pred CEEEECCC
Confidence 99999887
No 338
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.54 E-value=0.00039 Score=59.30 Aligned_cols=80 Identities=19% Similarity=0.301 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYF--PE 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~--~~ 87 (208)
.+.++||+||+|++|...++.+...|++|++++++.++.+.+.+++ +... ..|..+...+.+.+.+.. -+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999888888999999999887765543232 3211 234443323333333332 13
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|++|++.|
T Consensus 493 ~iDilV~nAG 502 (676)
T TIGR02632 493 GVDIVVNNAG 502 (676)
T ss_pred CCcEEEECCC
Confidence 6999999987
No 339
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.53 E-value=0.00069 Score=50.40 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=50.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhH---CCCCcc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRY---FPEGIN 90 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~---~~~~~d 90 (208)
.+.+++|+||+|++|...+..+...|++|+.+.+ ++++.+.+.++++.. . ..|..+.+.+.+.+.+. .+.++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3568999999999999999988888999987654 455544444345422 1 12443332333333332 222499
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999875
No 340
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.53 E-value=0.00086 Score=47.35 Aligned_cols=79 Identities=14% Similarity=0.200 Sum_probs=54.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--Ce---eEecCCCccHHHHHHhHCC--CCccE
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DE---AFNYKEEPDLDAALKRYFP--EGINI 91 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~---v~~~~~~~~~~~~~~~~~~--~~~d~ 91 (208)
....+|+||++++|.+..|.....|++|.+.+.+.+..+.....+|. ++ -.|.++..+....+++... +.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 35578999999999999999999999999999777665554436765 22 2344443233332333322 26899
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
+++|.|
T Consensus 94 lVncAG 99 (256)
T KOG1200|consen 94 LVNCAG 99 (256)
T ss_pred EEEcCc
Confidence 999998
No 341
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.53 E-value=0.00056 Score=50.51 Aligned_cols=78 Identities=19% Similarity=0.282 Sum_probs=49.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhc---CCC---eeEecCCCccHHHHHHhHC--CCCcc
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKF---GFD---EAFNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
.++||+||+|++|...++.+...|++|+++.+ ++++.+...+++ +.. ...|..+...+.+.+.... .+++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 36899999999999999999889999998887 444333322122 211 1234443312333333322 13689
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|.+.|
T Consensus 81 ~vi~~ag 87 (242)
T TIGR01829 81 VLVNNAG 87 (242)
T ss_pred EEEECCC
Confidence 9999987
No 342
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.52 E-value=0.0006 Score=47.73 Aligned_cols=101 Identities=20% Similarity=0.222 Sum_probs=67.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEe-cCC---------------CccHHHHHH
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFN-YKE---------------EPDLDAALK 82 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~-~~~---------------~~~~~~~~~ 82 (208)
.-.|+|+|+ |.+|+.|+++++.+|++++..+..+++.+... ..+...+.. +.+ ...+...+.
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 367889895 99999999999999999999999998888887 666643322 100 102222333
Q ss_pred hHCCCCccEEEeCCC--c---h--hHHHHHHhhccCCEEEEEecccc
Q 028523 83 RYFPEGINIYFENVG--G---K--MLDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 83 ~~~~~~~d~v~d~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
+... .+|++|.+.- + + .-.+.++.|+++..++.+....+
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 2221 3799885321 2 1 34678889999999999887665
No 343
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.52 E-value=0.00065 Score=52.31 Aligned_cols=104 Identities=14% Similarity=0.217 Sum_probs=69.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----Ce----eEecCCCccHHHHHHhHC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DE----AFNYKEEPDLDAALKRYF--PE 87 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~~~~~~--~~ 87 (208)
.|.+++|+|+++|+|..+++-+...|++|+.++|+.++.+.+.+++.. .. .+|-.+.........++. ..
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 567899999999999999999999999999999998776666544432 11 223333211222222222 22
Q ss_pred CccEEEeCCCc--h----------------------hHHHHHHhhccC--CEEEEEeccc
Q 028523 88 GINIYFENVGG--K----------------------MLDAVLLNMRIQ--GRITLCGMIS 121 (208)
Q Consensus 88 ~~d~v~d~~g~--~----------------------~~~~~~~~l~~~--G~~v~~g~~~ 121 (208)
+.|+.|+.+|- . ..+..++.|+.. +|+|.+++..
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 78999988761 1 134566666654 8999988744
No 344
>PRK07069 short chain dehydrogenase; Validated
Probab=97.51 E-value=0.00062 Score=50.61 Aligned_cols=76 Identities=18% Similarity=0.305 Sum_probs=50.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhc----CCCe----eEecCCCccHHHHHHhHCC--CCcc
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKF----GFDE----AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
++|+||+|++|...++.+...|++|++++++ .+..+.+.+++ +... ..|..+.+.+.+.+.+... +++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999998888889999999987 55554443232 2211 2344443234333333322 3689
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
+++.+.|
T Consensus 82 ~vi~~ag 88 (251)
T PRK07069 82 VLVNNAG 88 (251)
T ss_pred EEEECCC
Confidence 9999987
No 345
>PRK08264 short chain dehydrogenase; Validated
Probab=97.51 E-value=0.00077 Score=49.73 Aligned_cols=75 Identities=20% Similarity=0.271 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCC-e--eEecCCCccHHHHHHhHCCCCccEEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
.+.+++|+||+|++|...++.+...|+ +|+++.++.++.+. .+.. . ..|..+...+.+.+.. . +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEA-A-SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHh-c-CCCCEEE
Confidence 467899999999999999999988999 99999988765442 2221 1 2344443123322222 1 2589999
Q ss_pred eCCCc
Q 028523 94 ENVGG 98 (208)
Q Consensus 94 d~~g~ 98 (208)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98875
No 346
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00026 Score=53.00 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=49.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d 94 (208)
+|.++||+||+|++|...++.+...|++|+++++++++. .. -... ...|..+.+.....+.+... +++|++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999999999999999998888899999999876431 11 0111 12344433123322222211 36999999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 84 ~ag 86 (260)
T PRK06523 84 VLG 86 (260)
T ss_pred CCc
Confidence 887
No 347
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=97.50 E-value=0.003 Score=46.72 Aligned_cols=102 Identities=14% Similarity=0.141 Sum_probs=69.2
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC-
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF- 85 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~- 85 (208)
.+.+..++++||-.| ++.|..++.+++.++ .+|+.++.+++..+.+++ +.|...-+..... +..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence 445667788999888 567777778887763 499999999988777764 3454332223233 4445454442
Q ss_pred ---CCCccEEEeCCC----chhHHHHHHhhccCCEEEE
Q 028523 86 ---PEGINIYFENVG----GKMLDAVLLNMRIQGRITL 116 (208)
Q Consensus 86 ---~~~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~ 116 (208)
.+.||+||--.. ...+..+++.|++||.++.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 237999986543 2367888999999998775
No 348
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.001 Score=49.32 Aligned_cols=77 Identities=12% Similarity=0.169 Sum_probs=50.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCC-e--eEecCCCccHHHHHHhHCCCCccEE
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEPDLDAALKRYFPEGINIY 92 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v 92 (208)
.+++|+||+|++|...++.+...|++|+++++++++.+...+++ +.. . ..|..+..++.+.+.+.. ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 47999999999999999988888999999999887665443222 111 1 234343313333333322 247999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+.+.|
T Consensus 81 v~~ag 85 (243)
T PRK07102 81 LIAVG 85 (243)
T ss_pred EECCc
Confidence 98776
No 349
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.48 E-value=0.0029 Score=45.14 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=60.4
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCC-C
Q 028523 13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV-G-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPE-G 88 (208)
Q Consensus 13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g-~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~ 88 (208)
...+++|++||..|+ |+ |..+..+++.. + .+|++++.++.. . ..+... ..|..+. ...+.+.+..+. +
T Consensus 27 ~~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence 346789999999994 43 33445555444 3 489999988753 1 223322 1243333 334445444444 7
Q ss_pred ccEEEeC-C----C-------------chhHHHHHHhhccCCEEEEEe
Q 028523 89 INIYFEN-V----G-------------GKMLDAVLLNMRIQGRITLCG 118 (208)
Q Consensus 89 ~d~v~d~-~----g-------------~~~~~~~~~~l~~~G~~v~~g 118 (208)
+|+|+.. . | ...+..++++|++||+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999952 1 2 135677899999999998754
No 350
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.48 E-value=0.00063 Score=50.70 Aligned_cols=77 Identities=12% Similarity=0.182 Sum_probs=51.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCccEE
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
+++|+|++|++|...++.+...|++|+.+.+++++.+.+.++ .+.. . ..|..+...+.+.+.+... +++|++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 81 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999988888999999999887665443322 2322 1 2344443223333333321 268999
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
|.+.|
T Consensus 82 i~~ag 86 (254)
T TIGR02415 82 VNNAG 86 (254)
T ss_pred EECCC
Confidence 99887
No 351
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.47 E-value=0.0011 Score=49.10 Aligned_cols=80 Identities=21% Similarity=0.344 Sum_probs=50.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHh---cCCC-eeE--ecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKNK---FGFD-EAF--NYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~~---~g~~-~v~--~~~~~~~~~~~~~~~~~--~~ 88 (208)
++.+++|+|++|++|...++.+...|++|+++.++... .+...+. .+.. ..+ |..+...+.+.+.+... ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999998889999777766542 2222212 2322 122 44443233333333322 26
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|.++.+.|
T Consensus 84 id~vi~~ag 92 (248)
T PRK05557 84 VDILVNNAG 92 (248)
T ss_pred CCEEEECCC
Confidence 899999887
No 352
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.46 E-value=0.00084 Score=50.33 Aligned_cols=80 Identities=16% Similarity=0.197 Sum_probs=51.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
++.+++|+||++++|...++.+...|++|+.+.++.. ..+.+.+ ..+... ..|..+.....+.+..... ++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999888877543 2222221 223321 2344443223333333222 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|+++.+.|
T Consensus 86 id~lv~~ag 94 (261)
T PRK08936 86 LDVMINNAG 94 (261)
T ss_pred CCEEEECCC
Confidence 999999887
No 353
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.45 E-value=0.00057 Score=52.18 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=62.3
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccE
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
..++++||-.|. |. |..++.+++ .|+ +|++++.++...+.+++.+ +....+..... + ......++||+
T Consensus 157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence 457899999984 44 877776665 466 9999999988777776422 22111111111 1 11122337999
Q ss_pred EEeCCCch----hHHHHHHhhccCCEEEEEecc
Q 028523 92 YFENVGGK----MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 92 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~ 120 (208)
|+...... .+..+.+.|+|||.++..|..
T Consensus 229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 99765432 466778999999999887653
No 354
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=97.45 E-value=0.0041 Score=46.28 Aligned_cols=102 Identities=10% Similarity=0.089 Sum_probs=71.6
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHC-
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYF- 85 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~- 85 (208)
.+.+....++||-.| ..+|..++.+++.+ +.+++.+..+++..+.+++ +.|...-+..... +..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~ 149 (247)
T PLN02589 73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE 149 (247)
T ss_pred HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence 334556678899998 68899999999887 4699999999887776654 3465443344444 5555555543
Q ss_pred ----CCCccEEEeCCCc----hhHHHHHHhhccCCEEEE
Q 028523 86 ----PEGINIYFENVGG----KMLDAVLLNMRIQGRITL 116 (208)
Q Consensus 86 ----~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 116 (208)
.+.||.||--... ..++.++++|++||.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 1379999865552 257888999999998765
No 355
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.44 E-value=0.0038 Score=45.55 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=66.2
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH
Q 028523 10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~ 84 (208)
+.....++++++||-.| .|.|..++.+++..+. +|+.++.+++-.+.+++ ++|.+.+- .... +..+...
T Consensus 69 ~~~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~-d~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVG-DGTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEEC-CcccCCc--
Confidence 33556789999999988 4668888888887654 79999999887766653 34443211 1111 2111111
Q ss_pred CCCCccEEEeCCC-chhHHHHHHhhccCCEEEEE
Q 028523 85 FPEGINIYFENVG-GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 85 ~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~ 117 (208)
....||+|+-... ........+.|++||+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 1126999886544 44566788999999998764
No 356
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.42 E-value=0.0062 Score=47.21 Aligned_cols=90 Identities=20% Similarity=0.141 Sum_probs=65.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
-.|.++.|+| .|.||++.++.++..|.+|+...+++. .+..+ .+++.++ ++.+.+++ .|++.-..
T Consensus 144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHC 208 (324)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeC
Confidence 4589999999 699999999999999999999997765 22222 4544333 33333433 78887766
Q ss_pred C-ch-----hHHHHHHhhccCCEEEEEeccc
Q 028523 97 G-GK-----MLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 97 g-~~-----~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+ .+ .-...+..|++++.+|.++.-.
T Consensus 209 Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 6 33 2467888999999999987743
No 357
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=97.42 E-value=0.00071 Score=48.86 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=70.5
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC-
Q 028523 13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP- 86 (208)
Q Consensus 13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~- 86 (208)
+.+.....+||-+| +.+|..++.+++.+ +.+|+.+..+++..+.+++ ..|...-+..... +..+.+.++..
T Consensus 40 l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~ 116 (205)
T PF01596_consen 40 LVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELAND 116 (205)
T ss_dssp HHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHT
T ss_pred HHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhc
Confidence 34556778999998 67899999999987 5699999999998777764 3455433333333 45555554422
Q ss_pred ---CCccEEEeCCC-c---hhHHHHHHhhccCCEEEEE
Q 028523 87 ---EGINIYFENVG-G---KMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 87 ---~~~d~v~d~~g-~---~~~~~~~~~l~~~G~~v~~ 117 (208)
+.||.||--.. . ..+..++++|++||.++.-
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 36999976444 2 2578889999999998763
No 358
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.40 E-value=0.00031 Score=52.78 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=50.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCC--CCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFP--EGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~d~v~d 94 (208)
.+.+++|+||+|++|...++.+...|++|+.+++++++.+. .... ...|..+...+.+.+.+... +++|++++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46789999999999999999998999999999877654321 1111 12344443233333333221 36899999
Q ss_pred CCC
Q 028523 95 NVG 97 (208)
Q Consensus 95 ~~g 97 (208)
+.|
T Consensus 84 ~Ag 86 (266)
T PRK06171 84 NAG 86 (266)
T ss_pred CCc
Confidence 887
No 359
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.023 Score=40.18 Aligned_cols=89 Identities=17% Similarity=0.155 Sum_probs=54.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC---e--eEecCCCccHHHHHHhHC--CCCccEEE
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEPDLDAALKRYF--PEGINIYF 93 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~~~~~~--~~~~d~v~ 93 (208)
+++|+||+| +|...++.+...|++|+++++++++.+.+...++.. . ..|.++.+++...+.... .+++|.+|
T Consensus 2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcCH-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 589999974 555566666667999999999888776655334321 1 236665434444444432 23689999
Q ss_pred eCCCchhHHHHHHhhcc
Q 028523 94 ENVGGKMLDAVLLNMRI 110 (208)
Q Consensus 94 d~~g~~~~~~~~~~l~~ 110 (208)
+.+-...-......++.
T Consensus 81 ~~vh~~~~~~~~~~~~~ 97 (177)
T PRK08309 81 AWIHSSAKDALSVVCRE 97 (177)
T ss_pred EeccccchhhHHHHHHH
Confidence 98765443334444444
No 360
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.40 E-value=0.0041 Score=46.07 Aligned_cols=97 Identities=20% Similarity=0.290 Sum_probs=64.8
Q ss_pred cCC--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHhcCCCe-eEecCCCccHH---HHHHhHCCCCccEEEeC
Q 028523 26 AAS--GAVGQLVGQFAKLVGCYVVGSAGSKDK----VDLLKNKFGFDE-AFNYKEEPDLD---AALKRYFPEGINIYFEN 95 (208)
Q Consensus 26 ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~----~~~~~~~~g~~~-v~~~~~~~~~~---~~~~~~~~~~~d~v~d~ 95 (208)
|++ +++|.+.++.+...|++|+++.++.++ .+.+.++.+... .+|..+.+++. +.+.+..++++|+++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 455 899999999999999999999999987 344443566542 23333332222 23333343579999987
Q ss_pred CCc-hh-----------------------------HHHHHHhhccCCEEEEEecccc
Q 028523 96 VGG-KM-----------------------------LDAVLLNMRIQGRITLCGMISQ 122 (208)
Q Consensus 96 ~g~-~~-----------------------------~~~~~~~l~~~G~~v~~g~~~~ 122 (208)
.+. .. .+.+.+.|+++|+++.++....
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~ 137 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA 137 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh
Confidence 651 10 2456668888999999877643
No 361
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=97.37 E-value=0.0066 Score=40.28 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=57.8
Q ss_pred EEEecCCchHHHHHHHHHHHcC--CEEEEEe--CCHHHHH-HHHHhcCCCeeEecCCCccHHHHH---------------
Q 028523 22 VFVSAASGAVGQLVGQFAKLVG--CYVVGSA--GSKDKVD-LLKNKFGFDEAFNYKEEPDLDAAL--------------- 81 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g--~~v~~~~--~s~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~--------------- 81 (208)
|.|+|+||+||..+.++.+... ++|+..+ ++-+.+. .++ +|.+..++-.++. ..+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~--~~~~l~~~~~~~~~~~~v~~ 77 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEE--AYEELKKALPSKGPGIEVLS 77 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHH--HHHHHHHHHHHTTSSSEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHH--HHHHHHHHhhhcCCCCEEEe
Confidence 5799999999999999999886 5777665 2333333 334 7877766544432 11122
Q ss_pred -----HhHCC-CCccEEEeCCC-chhHHHHHHhhccCCEEEE
Q 028523 82 -----KRYFP-EGINIYFENVG-GKMLDAVLLNMRIQGRITL 116 (208)
Q Consensus 82 -----~~~~~-~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~ 116 (208)
.++.. ..+|+++.++. ..-+...+..++.|-++.+
T Consensus 78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 22222 26899998766 4678888888887766544
No 362
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.0016 Score=48.62 Aligned_cols=78 Identities=13% Similarity=0.185 Sum_probs=49.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC--CCcc
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
..++|+||+|++|...++.+...|++|++++++.. ..+...+. .+.. . ..|..+..++...+..... +++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999888888999999886543 22222112 2321 1 2344443233333333322 2689
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|.+.|
T Consensus 83 ~vi~~ag 89 (256)
T PRK12745 83 CLVNNAG 89 (256)
T ss_pred EEEECCc
Confidence 9999876
No 363
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.36 E-value=0.0043 Score=44.19 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=63.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGIN 90 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 90 (208)
.++++.+||-.|+ |.|..+..+++.. +.+|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.+|
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD 114 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence 4556899998884 4566666666544 5699999999886665553 345433 222222 3322 211 23799
Q ss_pred EEEeCCC---chhHHHHHHhhccCCEEEEEec
Q 028523 91 IYFENVG---GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 91 ~v~d~~g---~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
+|+-... ...+..+.+.|++||+++.+-.
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 146 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPGGRFLALKG 146 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 9987433 2467788999999999988743
No 364
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.36 E-value=0.005 Score=46.05 Aligned_cols=91 Identities=19% Similarity=0.271 Sum_probs=60.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccE
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
+.++++||-.|. |. |..++.+++ .|+ +|++++.++...+.+++.+ +....+..... + ..||+
T Consensus 117 ~~~~~~VLDiGc-Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~-~----------~~fD~ 182 (250)
T PRK00517 117 VLPGKTVLDVGC-GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG-D----------LKADV 182 (250)
T ss_pred cCCCCEEEEeCC-cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC-C----------CCcCE
Confidence 568899999994 54 877776554 566 6999999998887776432 22111111110 0 04999
Q ss_pred EEeCCCch----hHHHHHHhhccCCEEEEEecc
Q 028523 92 YFENVGGK----MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 92 v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~ 120 (208)
|+.....+ .+..+.+.|++||.++..|..
T Consensus 183 Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 183 IVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred EEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 98766533 456788899999999987653
No 365
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.35 E-value=0.0022 Score=48.56 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=51.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCCC-Ccc
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFPE-GIN 90 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~~-~~d 90 (208)
.+|++++|.|+ ||.+.+++.-++..|+ +++++.|+.++.+.+.+.++... .....+. ... .+|
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~----------~~~~~~d 192 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADL----------EGLEEAD 192 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccc----------ccccccC
Confidence 35899999996 9999999999999997 89999999999888875565321 1111111 111 389
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|++++
T Consensus 193 liINaTp 199 (283)
T COG0169 193 LLINATP 199 (283)
T ss_pred EEEECCC
Confidence 9999987
No 366
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.35 E-value=0.0022 Score=51.14 Aligned_cols=90 Identities=16% Similarity=0.190 Sum_probs=57.5
Q ss_pred EEEecCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHhc-CCC---eeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 22 VFVSAASGAVGQLVGQFAKLVG-C-YVVGSAGSKDKVDLLKNKF-GFD---EAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g-~-~v~~~~~s~~~~~~~~~~~-g~~---~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
|+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++ +.. ..+|..+. .+ +.++.. +.|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~-l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP---ES-LAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH---HH-HHHHHT-TSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH---HH-HHHHHh-cCCEEEEC
Confidence 789998 999999999887665 4 8999999999988776342 221 23444432 22 444433 36999999
Q ss_pred CCch-hHHHHHHhhccCCEEEEE
Q 028523 96 VGGK-MLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 96 ~g~~-~~~~~~~~l~~~G~~v~~ 117 (208)
+|.. ....+..|+..|-+++..
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CccchhHHHHHHHHHhCCCeecc
Confidence 9964 444555566778888883
No 367
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.34 E-value=0.0013 Score=54.06 Aligned_cols=73 Identities=16% Similarity=0.131 Sum_probs=53.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
.+..|++|+|+|. |.+|++++++++..|++|++++.++.+.+.++ +.|.. ++... ...+.+. .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHhh-----cCCEEEE
Confidence 4567899999995 99999999999999999999997766666666 67763 32221 1122222 3799999
Q ss_pred CCCc
Q 028523 95 NVGG 98 (208)
Q Consensus 95 ~~g~ 98 (208)
+.|-
T Consensus 77 SpGi 80 (488)
T PRK03369 77 SPGF 80 (488)
T ss_pred CCCC
Confidence 8883
No 368
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.34 E-value=0.0056 Score=45.13 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=71.9
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFP 86 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~ 86 (208)
..+++.+|++|+=.| .|.|.+++-|++..|. +|+.....++..+.+++. +|....+..... |..+.+. .
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~---~ 161 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGID---E 161 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-ccccccc---c
Confidence 457899999987766 5679999999998875 999999999988877653 344332222222 3222211 1
Q ss_pred CCccEEEeCCCc--hhHHHHHHhhccCCEEEEEec
Q 028523 87 EGINIYFENVGG--KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 87 ~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~ 119 (208)
..+|.+|--... ..++.+.+.|++||+++.+..
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 168988755553 588999999999999998743
No 369
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.004 Score=45.47 Aligned_cols=76 Identities=12% Similarity=0.215 Sum_probs=49.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCee--EecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.+++|+||+|.+|...+..+... .+|++++++.++.+.+.+......+ .|..+...+.+.+... +++|.+|.+.|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag 80 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG 80 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 57999999999999988777666 8999999998776665523321122 2333221222222211 26999999887
Q ss_pred c
Q 028523 98 G 98 (208)
Q Consensus 98 ~ 98 (208)
.
T Consensus 81 ~ 81 (227)
T PRK08219 81 V 81 (227)
T ss_pred c
Confidence 3
No 370
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0037 Score=44.82 Aligned_cols=87 Identities=17% Similarity=0.185 Sum_probs=54.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCc-h
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGG-K 99 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~ 99 (208)
+++|+||++++|...++.+... .+|+.+++++. ...+|..+.+.+...+.+. +++|+++.+.|. .
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~~~ 67 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAGKVH 67 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCCCCC
Confidence 5899999999999887766655 89999887643 1123444431333333322 368888888762 1
Q ss_pred -------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523 100 -------------------------MLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 100 -------------------------~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
..+.+.+.+.++|+++.++...
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 0223344556778888887644
No 371
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.31 E-value=0.0056 Score=46.65 Aligned_cols=72 Identities=19% Similarity=0.120 Sum_probs=50.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC----CeeEecCCCccHHHHHHhHCCCCccE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
..+.+++|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.+.++. ..+.... +..+.+ ..+|+
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDi 195 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADG 195 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCE
Confidence 35678999995 9999999999999998 899999998887776545432 1222211 222212 14899
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
||+|+.
T Consensus 196 VInaTp 201 (284)
T PRK12549 196 LVHATP 201 (284)
T ss_pred EEECCc
Confidence 999965
No 372
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.30 E-value=0.0093 Score=39.05 Aligned_cols=99 Identities=22% Similarity=0.302 Sum_probs=65.8
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---hcCCCe--eEecCCCccHHHHHHhHC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEPDLDAALKRYF 85 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~~ 85 (208)
....+.++++++-.|. |.|..+..+++..+ .+|++++.++...+.+++ .++... ++.. +....... .
T Consensus 13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~-~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG----DAPEALED-S 85 (124)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec----cccccChh-h
Confidence 4456777889998884 44999999998875 599999999887776653 344332 2221 11110111 1
Q ss_pred CCCccEEEeCCCc----hhHHHHHHhhccCCEEEEE
Q 028523 86 PEGINIYFENVGG----KMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 86 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 117 (208)
.+.+|+|+...+. ..+..+.+.|+++|.++..
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 2369999976542 2678899999999998864
No 373
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=97.30 E-value=0.0025 Score=47.99 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=48.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHhcC----CCe---eEecCCCccHH----HHHHhHCC-
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS-KDKVDLLKNKFG----FDE---AFNYKEEPDLD----AALKRYFP- 86 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s-~~~~~~~~~~~g----~~~---v~~~~~~~~~~----~~~~~~~~- 86 (208)
.+++|+||++++|...++.+...|++|++++++ +++.+.+.+++. ... ..|..+.+.+. +.+.+...
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 468999999999999999988899999988654 444443332332 111 23444431221 12222211
Q ss_pred -CCccEEEeCCC
Q 028523 87 -EGINIYFENVG 97 (208)
Q Consensus 87 -~~~d~v~d~~g 97 (208)
+++|+++.+.|
T Consensus 82 ~g~iD~lv~nAG 93 (267)
T TIGR02685 82 FGRCDVLVNNAS 93 (267)
T ss_pred cCCceEEEECCc
Confidence 36999999887
No 374
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.30 E-value=0.0021 Score=47.34 Aligned_cols=70 Identities=19% Similarity=0.300 Sum_probs=50.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHhcCCCee-EecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD--KVDLLKNKFGFDEA-FNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~--~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
|+|+||+|.+|...++.+...+.+|.+.+|+.. ..+.++ ..|+..+ .|+.+. +.+.+... |+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~----~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDP----ESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-H----HHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCH----HHHHHHHc-CCceEEeecC
Confidence 789999999999999999888889999998864 345566 6787533 333332 22222222 6999999888
No 375
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.29 E-value=0.0042 Score=42.66 Aligned_cols=94 Identities=18% Similarity=0.173 Sum_probs=61.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
.++.+++|.|+ |++|...++.+...| .+|++.++++++.+.+.++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhc-----cccCCEEEe
Confidence 45788999996 999999998888886 589999999888776554666421 11111 22221 125899999
Q ss_pred CCCchhH-----HHHHHhhccCCEEEEEec
Q 028523 95 NVGGKML-----DAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 95 ~~g~~~~-----~~~~~~l~~~G~~v~~g~ 119 (208)
|++.... ......++++..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9885432 112234667777776654
No 376
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.28 E-value=0.002 Score=47.79 Aligned_cols=81 Identities=21% Similarity=0.263 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHh---cCCCe-e--EecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNK---FGFDE-A--FNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~~~~~--~~ 88 (208)
.+.+++|+||+|++|...++.+...|++|+++.+ +++..+...+. .+... . +|..+.+.+.+.+.+... +.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999888888999887654 34443332212 23221 1 233333223333333322 25
Q ss_pred ccEEEeCCCc
Q 028523 89 INIYFENVGG 98 (208)
Q Consensus 89 ~d~v~d~~g~ 98 (208)
+|.+|.+.|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 377
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.28 E-value=0.0028 Score=48.46 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=35.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHhc
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK---DKVDLLKNKF 63 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~---~~~~~~~~~~ 63 (208)
.++.+++|+|+ ||+|.+++..+...|+ +|+++.|+. ++.+.+.+++
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 35788999997 8999998888888999 599999885 4444443244
No 378
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.28 E-value=0.0058 Score=46.26 Aligned_cols=101 Identities=14% Similarity=0.172 Sum_probs=62.8
Q ss_pred HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---CeeEecCCCccHHHHHHhH
Q 028523 8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~ 84 (208)
.+|.+.....++.+++|+|+ |++|.+.+..+...|.+|+++.+++++.+.+.+.++. ...+. ..+ .
T Consensus 106 ~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~------~~~----~ 174 (270)
T TIGR00507 106 SDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS------MDE----L 174 (270)
T ss_pred HHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec------hhh----h
Confidence 34433233355789999996 8999999888888899999999998876665534432 11211 111 1
Q ss_pred CCCCccEEEeCCCchh---HH---HHHHhhccCCEEEEEec
Q 028523 85 FPEGINIYFENVGGKM---LD---AVLLNMRIQGRITLCGM 119 (208)
Q Consensus 85 ~~~~~d~v~d~~g~~~---~~---~~~~~l~~~G~~v~~g~ 119 (208)
....+|+||+|++... .. .....++++..++.+..
T Consensus 175 ~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 175 PLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred cccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 1125899999988421 11 12345677766666643
No 379
>PRK00811 spermidine synthase; Provisional
Probab=97.28 E-value=0.0045 Score=47.18 Aligned_cols=98 Identities=7% Similarity=0.033 Sum_probs=63.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC-----C--CeeEecCCCccHHHHHHhHCCCC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG-----F--DEAFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g-----~--~~v~~~~~~~~~~~~~~~~~~~~ 88 (208)
+..++||+.|+ |.|..+..++++.+. +|.++..+++-.+.+++.+. . +.-+..... +..+.+.. ..+.
T Consensus 75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence 46789999995 457777788887665 89999999988777774332 1 111111112 44444443 3447
Q ss_pred ccEEEeCCC-----------chhHHHHHHhhccCCEEEEEe
Q 028523 89 INIYFENVG-----------GKMLDAVLLNMRIQGRITLCG 118 (208)
Q Consensus 89 ~d~v~d~~g-----------~~~~~~~~~~l~~~G~~v~~g 118 (208)
+|+|+--.. .+.+..+.+.|+++|.++.-.
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 999986431 123567889999999988743
No 380
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.26 E-value=0.0097 Score=46.46 Aligned_cols=89 Identities=19% Similarity=0.204 Sum_probs=64.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|.+|.|+| .|.+|...++.++..|.+|++.+++.+.. ... .+|.. +. ++.+.+.+ .|+|+.++.
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~~---~l~ell~~-----aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----YR---PLEELLRE-----SDFVSLHVP 213 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----ec---CHHHHHhh-----CCEEEEeCC
Confidence 678999999 59999999999999999999998775443 233 44431 11 34444433 799999887
Q ss_pred -ch-----hHHHHHHhhccCCEEEEEeccc
Q 028523 98 -GK-----MLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 98 -~~-----~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
.+ .-...+..|+++..++.++...
T Consensus 214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~ 243 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPTAILVNTARGK 243 (333)
T ss_pred CChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence 33 1246788999999999887643
No 381
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.26 E-value=0.0033 Score=49.32 Aligned_cols=76 Identities=21% Similarity=0.255 Sum_probs=50.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--C-e--eEecCCCccHHHHHHhHCCC-CccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEPDLDAALKRYFPE-GINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~~~~~~~~-~~d~ 91 (208)
+|.+|||+||+|.+|..+++.+...|.+|+++++++.......+.++. . . ..|..+. +.+.+...+ ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA----AKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH----HHHHHHHhhcCCCE
Confidence 478999999999999999999988999999998776543322112221 1 1 2233332 223333333 5899
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
||.+.+
T Consensus 79 vih~A~ 84 (349)
T TIGR02622 79 VFHLAA 84 (349)
T ss_pred EEECCc
Confidence 999887
No 382
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.26 E-value=0.0082 Score=47.32 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=64.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHhcCCCeeEecCCCccHHHHHH-------------
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLV--GCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALK------------- 82 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~------------- 82 (208)
.+|.|.|++|++|..+++..+.. .++|++.+ ++.+++....++|++..++-.++. ....++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~--~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEE--AAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHH--HHHHHHHhhccCCceEEEC
Confidence 47899999999999999998765 46887775 444455544448888765443331 111222
Q ss_pred -----hHCCC-CccEEEeCCCc-hhHHHHHHhhccCCEEEE
Q 028523 83 -----RYFPE-GINIYFENVGG-KMLDAVLLNMRIQGRITL 116 (208)
Q Consensus 83 -----~~~~~-~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~ 116 (208)
++... .+|+|+.++++ ..+...+..++.|-++.+
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 22222 58999998886 567788888888777655
No 383
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.26 E-value=0.0018 Score=48.03 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=48.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCcc
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGIN 90 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~d 90 (208)
.+++|+||+|++|...++.+...|++|+++. +++++.+.+.+ ..+... ..|..+..++.+.+.+... +++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999998888899987765 44444333221 223221 2343333233333333321 3699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
++|.+.|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9999887
No 384
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.26 E-value=0.0041 Score=49.66 Aligned_cols=104 Identities=18% Similarity=0.164 Sum_probs=63.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHhc-CCCe-eEecCCCccHHHHHHhHCCCC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD------LLKNKF-GFDE-AFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~------~~~~~~-g~~~-v~~~~~~~~~~~~~~~~~~~~ 88 (208)
..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+ ...+.. +... ..|..+.+.+...++.. +.+
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~~ 136 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GDP 136 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CCC
Confidence 45779999999999999999988888999999998765421 111012 2222 24555442333333322 116
Q ss_pred ccEEEeCCCch------h-------HHHHHHhhccC--CEEEEEeccc
Q 028523 89 INIYFENVGGK------M-------LDAVLLNMRIQ--GRITLCGMIS 121 (208)
Q Consensus 89 ~d~v~d~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~ 121 (208)
+|+||+|.+.. . ....++.+... ++++.++...
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 99999987631 1 12233444332 5788887653
No 385
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=97.25 E-value=0.0025 Score=47.28 Aligned_cols=107 Identities=15% Similarity=0.233 Sum_probs=67.6
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHH-HHHHh
Q 028523 10 FFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLD-AALKR 83 (208)
Q Consensus 10 l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~-~~~~~ 83 (208)
+....++.+|++|+=-| .|.|-+..-+++..|- +|+.....+++.+.+++ .+|....+..... |+. +.+.+
T Consensus 32 I~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--ST
T ss_pred HHHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccc
Confidence 33557899999987766 5678888889988874 99999999998877765 3455432222112 221 12211
Q ss_pred HCCCCccEEEeCCCc--hhHHHHHHhh-ccCCEEEEEec
Q 028523 84 YFPEGINIYFENVGG--KMLDAVLLNM-RIQGRITLCGM 119 (208)
Q Consensus 84 ~~~~~~d~v~d~~g~--~~~~~~~~~l-~~~G~~v~~g~ 119 (208)
-....+|.||-=... ..+..+.+.| ++||+++.+..
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 112368988765553 5899999999 89999988843
No 386
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=97.25 E-value=0.0022 Score=48.74 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=61.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCC-CC-ccEEEeCCC
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFP-EG-INIYFENVG 97 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~-~~-~d~v~d~~g 97 (208)
+|+|+||+|.+|..+++.+...|.+|.+.+|++++.. ..+... ..|+.+.+.+...++.... .+ +|.+|.+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999988888999999999876532 223322 3566654234444432111 25 899987766
Q ss_pred c--h---hHHHHHHhhccCC--EEEEEec
Q 028523 98 G--K---MLDAVLLNMRIQG--RITLCGM 119 (208)
Q Consensus 98 ~--~---~~~~~~~~l~~~G--~~v~~g~ 119 (208)
. . .....++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 2 1 2334445454443 7877765
No 387
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.0018 Score=49.88 Aligned_cols=80 Identities=18% Similarity=0.191 Sum_probs=49.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHC-CCCc
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYF-PEGI 89 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~-~~~~ 89 (208)
+|.+++|+||++++|...++.+...|++|++.+++. +..+.+.+ ..|... ..|..+.+...+.+.... -+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999988888899999887643 23322221 234322 123333212222222211 2479
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|++.|
T Consensus 91 D~li~nAG 98 (306)
T PRK07792 91 DIVVNNAG 98 (306)
T ss_pred CEEEECCC
Confidence 99999887
No 388
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.25 E-value=0.0062 Score=46.23 Aligned_cols=77 Identities=19% Similarity=0.178 Sum_probs=46.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC----CCee--E--e-cCCCccHHHHHHhHCCC-Ccc
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG----FDEA--F--N-YKEEPDLDAALKRYFPE-GIN 90 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g----~~~v--~--~-~~~~~~~~~~~~~~~~~-~~d 90 (208)
|||+||+|++|...++-+...+. ++++.++++.++-.+++++. ...+ . . .-+- .-.+.+...... ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDv-rd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDV-RDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSC-CHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecc-cCHHHHHHHHhhcCCC
Confidence 79999999999998877777776 89999999888777766662 1111 0 0 1111 223455555554 899
Q ss_pred EEEeCCCch
Q 028523 91 IYFENVGGK 99 (208)
Q Consensus 91 ~v~d~~g~~ 99 (208)
+||.++.-+
T Consensus 80 iVfHaAA~K 88 (293)
T PF02719_consen 80 IVFHAAALK 88 (293)
T ss_dssp EEEE-----
T ss_pred EEEEChhcC
Confidence 999988643
No 389
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.24 E-value=0.0054 Score=46.37 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=52.6
Q ss_pred HHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHC
Q 028523 7 YAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 85 (208)
Q Consensus 7 ~~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~ 85 (208)
+.+|.. .....+.+++|.|+ ||.+.+++..+...|+ +|+++.|+.++.+.+.+.++.. +...+ .
T Consensus 111 ~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~---~ 175 (272)
T PRK12550 111 AKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDL---G 175 (272)
T ss_pred HHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhc---c
Confidence 334433 23445678999996 9999999988888998 7999999998887776455421 11111 1
Q ss_pred CCCccEEEeCCC
Q 028523 86 PEGINIYFENVG 97 (208)
Q Consensus 86 ~~~~d~v~d~~g 97 (208)
...+|+|++|+.
T Consensus 176 ~~~~dlvINaTp 187 (272)
T PRK12550 176 GIEADILVNVTP 187 (272)
T ss_pred cccCCEEEECCc
Confidence 124899999986
No 390
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0023 Score=47.25 Aligned_cols=80 Identities=21% Similarity=0.302 Sum_probs=49.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC--CC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK-VDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP--EG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~-~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~--~~ 88 (208)
+..++||+||+|++|..+++.+...|++|+++.++..+ .+.+.+ ..+.. . ..|..+.+.+.+.+.+... ++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 34689999999999999999998899998776655443 222221 22321 1 2344433223333332211 36
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|.+|.+.|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 899999887
No 391
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=97.24 E-value=0.0027 Score=48.78 Aligned_cols=74 Identities=24% Similarity=0.389 Sum_probs=52.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHhcC-CC---eeE--ecCCCccHHHHHHhHCCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD---LLKNKFG-FD---EAF--NYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~---~~~~~~g-~~---~v~--~~~~~~~~~~~~~~~~~~~ 88 (208)
.+..|+|+||+|=||...+..+...|++|.+++|++++.+ .++ ++. +. .++ |..+...+...+. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence 5788999999999999999999999999999999988733 455 554 22 122 2222213333332 5
Q ss_pred ccEEEeCCC
Q 028523 89 INIYFENVG 97 (208)
Q Consensus 89 ~d~v~d~~g 97 (208)
+|.||.+..
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 999998765
No 392
>PLN02366 spermidine synthase
Probab=97.23 E-value=0.0054 Score=47.20 Aligned_cols=100 Identities=16% Similarity=0.091 Sum_probs=63.1
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCC------CeeEecCCCccHHHHHHhHCCCC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~~ 88 (208)
....++||+.|+ |-|..+..++++-+. +|.++..+++-.+.+++.+.. +.-+..... +..+.+++..++.
T Consensus 89 ~~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~ 165 (308)
T PLN02366 89 IPNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGT 165 (308)
T ss_pred CCCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCC
Confidence 456789999995 336677788888765 888999888767777633321 110111112 3344444332347
Q ss_pred ccEEEeCCCc-----------hhHHHHHHhhccCCEEEEEe
Q 028523 89 INIYFENVGG-----------KMLDAVLLNMRIQGRITLCG 118 (208)
Q Consensus 89 ~d~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~g 118 (208)
+|+||--... +.++.+.++|+++|.++.-+
T Consensus 166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 9998763321 24778899999999997643
No 393
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.23 E-value=0.0072 Score=42.39 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=61.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--CeeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEPDLDAALKRYFPEGINIYFENVGG 98 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 98 (208)
.|.|+||+|-+|...++=|+..|..|++++|++.+....+ ..-. ..+++.. ...+. +. |+|+||++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~---l~--g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASD---LA--GHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhh---hc--CCceEEEeccC
Confidence 4789999999999999999999999999999998876433 2111 1122211 11111 11 69999998873
Q ss_pred h----------hHHHHHHhhccC--CEEEEEeccc
Q 028523 99 K----------MLDAVLLNMRIQ--GRITLCGMIS 121 (208)
Q Consensus 99 ~----------~~~~~~~~l~~~--G~~v~~g~~~ 121 (208)
. ..+..+..|+.- -|+..+|...
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 2 133456666663 4788887643
No 394
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.23 E-value=0.014 Score=36.52 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=58.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVG---CYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g---~~v~~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
+|.|.| +|.+|.+.++-....| .+|+.+ .+++++.+.+.++++...... +..+.+++ .|+||-|+
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence 466777 5999999999888888 788855 999999988876777533221 33444443 79999999
Q ss_pred CchhHHHHHHhh---ccCCEEEEE
Q 028523 97 GGKMLDAVLLNM---RIQGRITLC 117 (208)
Q Consensus 97 g~~~~~~~~~~l---~~~G~~v~~ 117 (208)
....+...++.+ .++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 977666555544 445566554
No 395
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0029 Score=47.32 Aligned_cols=81 Identities=12% Similarity=0.155 Sum_probs=49.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHCC-
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK----DKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYFP- 86 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~----~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~- 86 (208)
.+.+++|+||+|++|...++.+...|++|++++++. +..+.+.+ ..+.. . .+|..+..+..+.+.+...
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 467899999999999999998888899977665432 22222221 23332 1 2344443233333333221
Q ss_pred -CCccEEEeCCCc
Q 028523 87 -EGINIYFENVGG 98 (208)
Q Consensus 87 -~~~d~v~d~~g~ 98 (208)
+++|++|++.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 368999998873
No 396
>PLN03075 nicotianamine synthase; Provisional
Probab=97.22 E-value=0.0057 Score=46.55 Aligned_cols=97 Identities=11% Similarity=0.023 Sum_probs=65.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHhcCC----CeeEecCCCccHHHHHHhHCCCCccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
.+++|+-.| +|+.|+.++-+++.. +.+++.++.+++..+.+++.+.. ..-+..... +..+.... .++||+
T Consensus 123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence 778899988 699999888888655 45899999999988888754422 221222222 33221111 137999
Q ss_pred EEeCC------C--chhHHHHHHhhccCCEEEEEe
Q 028523 92 YFENV------G--GKMLDAVLLNMRIQGRITLCG 118 (208)
Q Consensus 92 v~d~~------g--~~~~~~~~~~l~~~G~~v~~g 118 (208)
||..+ . ...+....+.|+|||.++.-.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 98875 2 136889999999999987644
No 397
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.21 E-value=0.007 Score=46.08 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=37.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhc
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKF 63 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~ 63 (208)
.++.+++|.|+ ||.+.+++.-+...|+ +++++.|+.++.+.+.+.+
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 35788999996 9999998888888998 8999999988877776444
No 398
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0025 Score=46.69 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=49.5
Q ss_pred EEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-e--eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 23 FVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 23 li~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
+|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+..++.+.+.+. +++|++|++.|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999888888999999999877766544333 221 2 23444432333333322 36899999887
No 399
>PRK06123 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0035 Score=46.47 Aligned_cols=79 Identities=16% Similarity=0.215 Sum_probs=48.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---hcCCCe---eEecCCCccHHHHHHhHCC--CCc
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKN---KFGFDE---AFNYKEEPDLDAALKRYFP--EGI 89 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~--~~~ 89 (208)
+.++||+||+|++|...++.....|++|+.+. +++++.+.+.+ ..+... ..|..+...+.+.+..... +++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 45799999999999998888888899887765 34443333321 233321 2344443233333333322 368
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|++|.+.|
T Consensus 82 d~li~~ag 89 (248)
T PRK06123 82 DALVNNAG 89 (248)
T ss_pred CEEEECCC
Confidence 99999887
No 400
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.19 E-value=0.0026 Score=47.09 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=50.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHC--CCCcc
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGS-AGSKDKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~-~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
.+++|+||+|++|...++.+...|++|+++ .+++++.+...+ ..+.. . ..|..+...+...+.+.. .+++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 478999999999999999888889998764 455554333221 23322 1 234444423333344332 23799
Q ss_pred EEEeCCCc
Q 028523 91 IYFENVGG 98 (208)
Q Consensus 91 ~v~d~~g~ 98 (208)
.+|.+.|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999873
No 401
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.18 E-value=0.0024 Score=48.64 Aligned_cols=75 Identities=12% Similarity=-0.035 Sum_probs=51.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
++.+++|.|+ |+.|.+++.-+...|+ +|+++.|+.++.+.+.++++... +.... .. +.+.... ..+|+||+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GD-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---ch-hhhhhcc-cCCCEEEEC
Confidence 5789999995 9999999998889998 89999999988877765654321 11111 00 1111111 258999999
Q ss_pred CCc
Q 028523 96 VGG 98 (208)
Q Consensus 96 ~g~ 98 (208)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 883
No 402
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.17 E-value=0.0036 Score=48.67 Aligned_cols=75 Identities=11% Similarity=0.105 Sum_probs=47.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcCCC--ee--EecCCCccHHHHHHhHCCCCccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFGFD--EA--FNYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
+|.+|||+||+|.+|...++.+...| .+|++.+++..+...+.+.+... .. .|..+. +.+.+... ++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~----~~l~~~~~-~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK----ERLTRALR-GVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH----HHHHHHHh-cCCE
Confidence 46789999999999999888776665 58988887766544343233221 11 244432 12222222 4899
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
||.+.+
T Consensus 78 Vih~Ag 83 (324)
T TIGR03589 78 VVHAAA 83 (324)
T ss_pred EEECcc
Confidence 999876
No 403
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.16 E-value=0.0067 Score=47.70 Aligned_cols=78 Identities=19% Similarity=0.220 Sum_probs=51.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc--CCC-eeE--ecCCCccHHHHHHhHCCCCc
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF--GFD-EAF--NYKEEPDLDAALKRYFPEGI 89 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~~~~~~~~~~ 89 (208)
+-..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+ +.. .++ |..+. +.+.+... ++
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~-~~ 80 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE----GSFDEAVK-GC 80 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH----HHHHHHHc-CC
Confidence 3456789999999999999999988888999999988776554433232 111 122 22221 22333222 48
Q ss_pred cEEEeCCC
Q 028523 90 NIYFENVG 97 (208)
Q Consensus 90 d~v~d~~g 97 (208)
|+||.+.+
T Consensus 81 d~Vih~A~ 88 (353)
T PLN02896 81 DGVFHVAA 88 (353)
T ss_pred CEEEECCc
Confidence 99999876
No 404
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.16 E-value=0.0035 Score=49.43 Aligned_cols=81 Identities=14% Similarity=0.086 Sum_probs=49.2
Q ss_pred CCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEeCCHH--H-------------HH-HHHHhcCCCe-e--EecCCCc
Q 028523 17 KQGEYVFVSAASGAVGQL--VGQFAKLVGCYVVGSAGSKD--K-------------VD-LLKNKFGFDE-A--FNYKEEP 75 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~--a~qla~~~g~~v~~~~~s~~--~-------------~~-~~~~~~g~~~-v--~~~~~~~ 75 (208)
..++++||+|+++++|++ .++.+ ..|++++++....+ + .. .++ +.|... . .|..+..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 456899999999999999 45666 88998888873221 1 22 333 556532 2 2333321
Q ss_pred cHHHHHHhHCC--CCccEEEeCCCch
Q 028523 76 DLDAALKRYFP--EGINIYFENVGGK 99 (208)
Q Consensus 76 ~~~~~~~~~~~--~~~d~v~d~~g~~ 99 (208)
...+.+..... +++|+++++++..
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23333333322 3699999998843
No 405
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=97.15 E-value=0.0062 Score=45.90 Aligned_cols=107 Identities=10% Similarity=0.171 Sum_probs=67.7
Q ss_pred HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC
Q 028523 8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE 87 (208)
Q Consensus 8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~ 87 (208)
..+....+++++.+||=.|+ |.|..+..+++..+++|++++.++.-.+.+++.+.....+..... ++.+ ....++
T Consensus 42 ~~~l~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~ 116 (263)
T PTZ00098 42 TKILSDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPEN 116 (263)
T ss_pred HHHHHhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCC
Confidence 33435567889999998884 346666777777788999999999888888743332111111111 2111 011123
Q ss_pred CccEEEeC-----CC----chhHHHHHHhhccCCEEEEEec
Q 028523 88 GINIYFEN-----VG----GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 88 ~~d~v~d~-----~g----~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
.||+|+.. .+ ...+..+.+.|+|||+++....
T Consensus 117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 69999862 11 1257888899999999987654
No 406
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.14 E-value=0.004 Score=43.28 Aligned_cols=76 Identities=21% Similarity=0.197 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe----eEecCCCccHHHHHHhHCCC-CccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEPDLDAALKRYFPE-GINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~~~~~~~~-~~d~v 92 (208)
.|..|+++|+.-++|...++-+...|++|+++.|.++.+..+. +.-... +.|.. +|+...+-+.+- .+|..
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV-~e~p~~I~Pi~~Dls---~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV-KETPSLIIPIVGDLS---AWEALFKLLVPVFPIDGL 81 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH-hhCCcceeeeEeccc---HHHHHHHhhcccCchhhh
Confidence 5788999999899999999999999999999999999988776 332221 22222 344333333332 56666
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
++..|
T Consensus 82 VNNAg 86 (245)
T KOG1207|consen 82 VNNAG 86 (245)
T ss_pred hccch
Confidence 66555
No 407
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=97.13 E-value=0.0034 Score=46.99 Aligned_cols=43 Identities=28% Similarity=0.320 Sum_probs=33.4
Q ss_pred EEEEecCCchHHHHHHHHH-HH---cCCEEEEEeCCHHHHHHHHHhc
Q 028523 21 YVFVSAASGAVGQLVGQFA-KL---VGCYVVGSAGSKDKVDLLKNKF 63 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla-~~---~g~~v~~~~~s~~~~~~~~~~~ 63 (208)
.++|+||++++|...++.+ +. .|++|+.+.+++++.+.+.+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 5899999999998876544 42 6899999999988776655343
No 408
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.13 E-value=0.0026 Score=49.29 Aligned_cols=39 Identities=18% Similarity=0.266 Sum_probs=33.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV 56 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~ 56 (208)
.+.++||+||+|.+|..+++.+...|++|++++++.++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence 468999999999999999998888899999888776543
No 409
>PLN03139 formate dehydrogenase; Provisional
Probab=97.13 E-value=0.019 Score=45.69 Aligned_cols=91 Identities=23% Similarity=0.185 Sum_probs=64.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|.+|.|+| .|.+|...++.++.+|.+|++.+++....+... +.|...+ . ++.+.+. ..|+|+.+..
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~-----~-~l~ell~-----~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE-----E-DLDAMLP-----KCDVVVINTP 264 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec-----C-CHHHHHh-----hCCEEEEeCC
Confidence 578999999 599999999999999999999887654434344 5554211 1 3444443 2799998877
Q ss_pred -chh-----HHHHHHhhccCCEEEEEeccc
Q 028523 98 -GKM-----LDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 98 -~~~-----~~~~~~~l~~~G~~v~~g~~~ 121 (208)
.+. -...+..|+++..+|.++...
T Consensus 265 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 294 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKGVLIVNNARGA 294 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence 331 246788999999999887643
No 410
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0026 Score=47.08 Aligned_cols=80 Identities=20% Similarity=0.254 Sum_probs=48.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHh---cCCC-e--eEecCCCccHHHHHHhHCC-
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG----SKDKVDLLKNK---FGFD-E--AFNYKEEPDLDAALKRYFP- 86 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~----s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~~~~~~~- 86 (208)
.+.+++|+||+|++|...++.+...|++|+++++ +.+..+.+.++ .+.. . ..|..+.......+.....
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999888888999988654 33333322212 2322 1 2333333123333332211
Q ss_pred -CCccEEEeCCC
Q 028523 87 -EGINIYFENVG 97 (208)
Q Consensus 87 -~~~d~v~d~~g 97 (208)
+++|.+|.+.|
T Consensus 85 ~~~~d~vi~~ag 96 (249)
T PRK12827 85 FGRLDILVNNAG 96 (249)
T ss_pred hCCCCEEEECCC
Confidence 36899999887
No 411
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.13 E-value=0.0024 Score=47.68 Aligned_cols=35 Identities=20% Similarity=0.114 Sum_probs=30.1
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEeCC
Q 028523 18 QGEYVFVSAASG--AVGQLVGQFAKLVGCYVVGSAGS 52 (208)
Q Consensus 18 ~g~~vli~ga~g--~vG~~a~qla~~~g~~v~~~~~s 52 (208)
.+.++||+||++ ++|...+..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 457899999984 89999888887889999999877
No 412
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.12 E-value=0.026 Score=43.03 Aligned_cols=107 Identities=15% Similarity=0.201 Sum_probs=74.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----CeeEecCCCcc---HHHHHHhHCCC-C
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEPD---LDAALKRYFPE-G 88 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~---~~~~~~~~~~~-~ 88 (208)
-++..|+|+|+-+|.|..++.-+...|.+|++.|..++..+.++.+..- +-.+|..+++. ....+++..+. +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 3566799999999999999998999999999999888777766633311 12456555423 33344555555 7
Q ss_pred ccEEEeCCC-ch--------------------------hHHHHHHhhcc-CCEEEEEeccccc
Q 028523 89 INIYFENVG-GK--------------------------MLDAVLLNMRI-QGRITLCGMISQY 123 (208)
Q Consensus 89 ~d~v~d~~g-~~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~~ 123 (208)
.=-++++.| .. .-...+.++++ .||+|.+++..+.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 778888887 21 12345566666 7999999988774
No 413
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.004 Score=46.10 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=48.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe---eEecCCCccHHHHHHh-----HCC-CCccE
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEPDLDAALKR-----YFP-EGINI 91 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~-----~~~-~~~d~ 91 (208)
++||+||+|++|...++.+...|++|++++++.++. ... ..+... ..|..+..++...+.+ +.. +++|+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 689999999999999988888899999999876542 222 334321 2444443233332222 122 26888
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
++.+.|
T Consensus 81 ~v~~ag 86 (243)
T PRK07023 81 LINNAG 86 (243)
T ss_pred EEEcCc
Confidence 888876
No 414
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=97.11 E-value=0.0029 Score=45.54 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=62.4
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~ 88 (208)
+.....++.+||-.|+ |.|..+..+++. |.+|++++.|++-.+.+++ ..+... +..... ++.+. .. ++.
T Consensus 24 ~~l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~--~~-~~~ 95 (197)
T PRK11207 24 EAVKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL--TF-DGE 95 (197)
T ss_pred HhcccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC--Cc-CCC
Confidence 4445667789999984 557788888875 7899999999886666552 222221 111111 22111 11 236
Q ss_pred ccEEEeCCC---------chhHHHHHHhhccCCEEEEEec
Q 028523 89 INIYFENVG---------GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 89 ~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
+|+|+.... ...+..+.+.|+|||.++.+..
T Consensus 96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 999987532 1357788889999999655543
No 415
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=97.10 E-value=0.004 Score=46.05 Aligned_cols=78 Identities=15% Similarity=0.197 Sum_probs=47.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcC---CC-e--eEecCCCccHHHHHHhHC--CCCcc
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFG---FD-E--AFNYKEEPDLDAALKRYF--PEGIN 90 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g---~~-~--v~~~~~~~~~~~~~~~~~--~~~~d 90 (208)
.+++|+|++|++|..+++.+...|++|+.+++++. ..+...+.++ .. . ..|..+.....+.+.... .+++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999888888999999998743 1221211222 11 1 233333312333233221 13699
Q ss_pred EEEeCCC
Q 028523 91 IYFENVG 97 (208)
Q Consensus 91 ~v~d~~g 97 (208)
.++.+.|
T Consensus 83 ~vi~~ag 89 (245)
T PRK12824 83 ILVNNAG 89 (245)
T ss_pred EEEECCC
Confidence 9999887
No 416
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.09 E-value=0.0041 Score=46.54 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=49.1
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHH----HHHHHhcCCCe---eEecCCCccH
Q 028523 18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGS-----------KDKV----DLLKNKFGFDE---AFNYKEEPDL 77 (208)
Q Consensus 18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s-----------~~~~----~~~~~~~g~~~---v~~~~~~~~~ 77 (208)
+|.+++|+||+ +++|...++.+...|++|++++++ .++. +.++ +.|... ..|..+..++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence 57899999998 489999999888899999987532 1111 2222 334422 2344433233
Q ss_pred HHHHHhHCC--CCccEEEeCCC
Q 028523 78 DAALKRYFP--EGINIYFENVG 97 (208)
Q Consensus 78 ~~~~~~~~~--~~~d~v~d~~g 97 (208)
.+.+.+... +.+|++|.+.|
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag 105 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAA 105 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCC
Confidence 333433322 25899999876
No 417
>PLN02244 tocopherol O-methyltransferase
Probab=97.09 E-value=0.0077 Score=47.18 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=63.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
+++++||=.|. |.|..+..+++..|++|++++.++...+.+++ +.|...-+..... +..+ ..+.++.||+|+
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~--~~~~~~~FD~V~ 191 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN--QPFEDGQFDLVW 191 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc--CCCCCCCccEEE
Confidence 67889998883 56777888888889999999999987776653 2233211111111 1111 011223699998
Q ss_pred eCCCc-------hhHHHHHHhhccCCEEEEEec
Q 028523 94 ENVGG-------KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 94 d~~g~-------~~~~~~~~~l~~~G~~v~~g~ 119 (208)
..... ..+..+.+.|+|||+++....
T Consensus 192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 64321 357889999999999987653
No 418
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.09 E-value=0.025 Score=40.63 Aligned_cols=104 Identities=15% Similarity=0.206 Sum_probs=63.2
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523 11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP 86 (208)
Q Consensus 11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~ 86 (208)
.....++++++||=.|+ |.|..++.+++.. +.+|++++.+++..+.+++ +++...+ ..... +..+.+....
T Consensus 33 ~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~-d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEG-SAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEEC-chHHHHhhCC-
Confidence 34457788899887773 4566666777654 5699999999988777663 3454322 11112 3322222222
Q ss_pred CCccEE-EeCCC--chhHHHHHHhhccCCEEEEEec
Q 028523 87 EGINIY-FENVG--GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 87 ~~~d~v-~d~~g--~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
..+|.+ ++... ...+..+.+.|++||+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 224444 43322 2467888999999999887643
No 419
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.09 E-value=0.0038 Score=45.06 Aligned_cols=92 Identities=9% Similarity=-0.003 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
.|.+|+|.|| |.+|...++.+...|++|+++.+... ....+. .-+. -.+... .+... . -.++|+||-++
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~---~~~~~--~--l~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQK---EFEPS--D--IVDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEec---CCChh--h--cCCceEEEEcC
Confidence 5789999997 99999888888888999988875422 222222 1121 111111 11110 0 01589999999
Q ss_pred CchhHHHHHHhhccCCEEEEEec
Q 028523 97 GGKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 97 g~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
+.+..+..+...+..+.++....
T Consensus 79 ~d~elN~~i~~~a~~~~lvn~~d 101 (202)
T PRK06718 79 NDPRVNEQVKEDLPENALFNVIT 101 (202)
T ss_pred CCHHHHHHHHHHHHhCCcEEECC
Confidence 97766655554444455665544
No 420
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.08 E-value=0.0076 Score=43.63 Aligned_cols=92 Identities=18% Similarity=0.124 Sum_probs=58.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
.|.+|||.|| |.+|..-++.+...|++|++++.... ....+. +.|.-..+ ..+. . ...+ .++|+||-++
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~-~~~~-~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWL-ARCF-D-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEE-eCCC-C-HHHh-----CCcEEEEECC
Confidence 4679999997 99999999999999999998875433 333333 33321121 1211 1 1111 2589999999
Q ss_pred Cch-hHHHHHHhhccCCEEEEEec
Q 028523 97 GGK-MLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 97 g~~-~~~~~~~~l~~~G~~v~~g~ 119 (208)
+.+ .........+..|..+....
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEECC
Confidence 864 55556666666777776544
No 421
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.06 E-value=0.013 Score=44.96 Aligned_cols=97 Identities=21% Similarity=0.209 Sum_probs=70.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHH-HcC-CEEEEEeCCHHHHHHHHHhcCC-CeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAK-LVG-CYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~-~~g-~~v~~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
-..+.|+|..||+=.++.++.+++ ..+ .+++..+ |..+..+.+ .+|. ++|+.|.+ +.++.....-+++
T Consensus 134 ~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Yd~-------i~~l~~~~~~v~V 204 (314)
T PF11017_consen 134 FGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTYDD-------IDSLDAPQPVVIV 204 (314)
T ss_pred CCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeehhh-------hhhccCCCCEEEE
Confidence 345778999999989988888887 444 4999998 778888888 9997 67888764 2333334567999
Q ss_pred eCCCc-hhHHHHHHhhccC-CEEEEEecccc
Q 028523 94 ENVGG-KMLDAVLLNMRIQ-GRITLCGMISQ 122 (208)
Q Consensus 94 d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~ 122 (208)
|+.|. +......+.+... -..+.+|..+.
T Consensus 205 DfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 205 DFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred ECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 99995 5666666666653 25667776654
No 422
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.04 E-value=0.0036 Score=45.95 Aligned_cols=74 Identities=14% Similarity=0.209 Sum_probs=51.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCC-eeEecCCCccHHHHHHhHCCCCccEEEeCCCc
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEPDLDAALKRYFPEGINIYFENVGG 98 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 98 (208)
|||+||+|-+|..++..+...|..|+...++..+......+.+.. ...|..+.+.+.+.+... ++|.||.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence 799999999999999999999999998888877665544233322 234555432333333332 68999998874
No 423
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.01 E-value=0.0052 Score=47.62 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=34.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVD 57 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~ 57 (208)
.|.+|||+||+|.+|...++.+...|.+|++++++..+.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 4689999999999999999888888999998888765443
No 424
>PLN00016 RNA-binding protein; Provisional
Probab=97.01 E-value=0.012 Score=46.82 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=60.9
Q ss_pred CCEEEEe----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHhcCCCeeEecCCCccHHHHHHh
Q 028523 19 GEYVFVS----AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDL-----------LKNKFGFDEAFNYKEEPDLDAALKR 83 (208)
Q Consensus 19 g~~vli~----ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~-----------~~~~~g~~~v~~~~~~~~~~~~~~~ 83 (208)
..+|||+ ||+|-+|..+++.+...|.+|++++++...... +. ..|...+ .. ++.+ +..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v-~~----D~~d-~~~ 124 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTV-WG----DPAD-VKS 124 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEE-Ee----cHHH-HHh
Confidence 4679999 999999999999888889999999988654221 11 2233222 11 2322 222
Q ss_pred HCCC-CccEEEeCCCch--hHHHHHHhhccC--CEEEEEecc
Q 028523 84 YFPE-GINIYFENVGGK--MLDAVLLNMRIQ--GRITLCGMI 120 (208)
Q Consensus 84 ~~~~-~~d~v~d~~g~~--~~~~~~~~l~~~--G~~v~~g~~ 120 (208)
.... ++|+|+++.+.+ .....++.++.. .+++.++..
T Consensus 125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 2222 799999998742 344555655543 378877754
No 425
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.00 E-value=0.0091 Score=46.48 Aligned_cols=94 Identities=10% Similarity=0.055 Sum_probs=63.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHhc----CCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFA-KLVGC-YVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEPDLDAALKRYFPEGIN 90 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla-~~~g~-~v~~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~d 90 (208)
+...+++|+| +|+.|...+..+ ...+. +|.+..+++++.+.+.+++ +.. +..+. ++.+.+. ..|
T Consensus 125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence 4567899999 599998776544 45677 8888899988876655333 432 22222 4444443 489
Q ss_pred EEEeCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523 91 IYFENVGGKMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 91 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+|+.|+++..-.-. +.+++|-++..+|...
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence 99999985322223 7889999999998754
No 426
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.00 E-value=0.013 Score=47.44 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=55.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM 100 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 100 (208)
+|.|.||+|.+|.+.++.++..|.+|++.++++++......++|.. . .. +..+.+. ..|+||-|+....
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~---~~--~~~e~~~-----~aDvVIlavp~~~ 70 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-Y---AN--DNIDAAK-----DADIVIISVPINV 70 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-e---cc--CHHHHhc-----cCCEEEEecCHHH
Confidence 5889998899999999999999999999998887753333266652 1 11 2222221 3677777776443
Q ss_pred H----HHHHHhhccCCEEEEEec
Q 028523 101 L----DAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 101 ~----~~~~~~l~~~G~~v~~g~ 119 (208)
. ......++++..++.++.
T Consensus 71 ~~~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 71 TEDVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHHHHHHhhCCCCCEEEEccc
Confidence 2 233334445555666554
No 427
>PRK07574 formate dehydrogenase; Provisional
Probab=97.00 E-value=0.0081 Score=47.69 Aligned_cols=90 Identities=12% Similarity=0.043 Sum_probs=60.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|.+|.|+| .|.+|...++.++.+|.+|++.+++....+... .+|... +. ++.+.+. ..|+|+.+..
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence 577899999 599999999999999999999997753333333 454321 11 3333332 3788888776
Q ss_pred -chh-----HHHHHHhhccCCEEEEEecc
Q 028523 98 -GKM-----LDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 98 -~~~-----~~~~~~~l~~~G~~v~~g~~ 120 (208)
.+. -...+..|+++..+|.++..
T Consensus 258 lt~~T~~li~~~~l~~mk~ga~lIN~aRG 286 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRGSYLVNTARG 286 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCCcEEEECCCC
Confidence 331 14567778888877777653
No 428
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.99 E-value=0.0054 Score=45.60 Aligned_cols=80 Identities=21% Similarity=0.287 Sum_probs=50.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHhcC----CCe---eEecCC-CccHHHHHHhHCC-
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK--VDLLKNKFG----FDE---AFNYKE-EPDLDAALKRYFP- 86 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~--~~~~~~~~g----~~~---v~~~~~-~~~~~~~~~~~~~- 86 (208)
.+..+||+||++++|.+.+..+...|++|+++.++.+. .+.+.+... ... ..|..+ .......+.+...
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 56889999999999999888888999998888877543 333331222 111 245543 2123333333322
Q ss_pred -CCccEEEeCCC
Q 028523 87 -EGINIYFENVG 97 (208)
Q Consensus 87 -~~~d~v~d~~g 97 (208)
+++|+++++.|
T Consensus 84 ~g~id~lvnnAg 95 (251)
T COG1028 84 FGRIDILVNNAG 95 (251)
T ss_pred cCCCCEEEECCC
Confidence 35999999888
No 429
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.98 E-value=0.033 Score=40.57 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=62.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE------e-cCCC-cc-HHHHHHhHC--
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF------N-YKEE-PD-LDAALKRYF-- 85 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~------~-~~~~-~~-~~~~~~~~~-- 85 (208)
.++.+||+.|. |.|.-++-+|. .|.+|++++.|+.-.+.+.++.+..... . +... -+ ....+.+..
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 57789999984 66888888875 6999999999999888764344432100 0 0000 00 000011111
Q ss_pred -CCCccEEEeCCC---------chhHHHHHHhhccCCEEEEEecc
Q 028523 86 -PEGINIYFENVG---------GKMLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 86 -~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~g~~ 120 (208)
.+.||.|+|+.- ...+..+.++|+|||+++.++..
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 125899999642 12577899999999987766553
No 430
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.98 E-value=0.029 Score=38.82 Aligned_cols=88 Identities=8% Similarity=0.104 Sum_probs=55.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|.+|+|.|| |.+|..-++.+...|++|+++. ++..+.+. +++... +..+ .+.+. .-.++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence 5788999997 9999988888888899988874 44444555 454211 2111 11111 0125899999999
Q ss_pred chhHHHHHHhhccCCEEEEE
Q 028523 98 GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 98 ~~~~~~~~~~l~~~G~~v~~ 117 (208)
.+..+.....++..+.++..
T Consensus 80 d~e~N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVNV 99 (157)
T ss_pred CHHHHHHHHHHHHHCCcEEE
Confidence 77666655555444434443
No 431
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.98 E-value=0.016 Score=44.73 Aligned_cols=89 Identities=15% Similarity=0.232 Sum_probs=61.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~--~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.+|.|+| .|.+|...++.++..|. +|++.++++++.+.++ +.|....+. . +..+.+ ...|+||.|+.
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~---~-~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT---T-SAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec---C-CHHHHh-----cCCCEEEECCC
Confidence 5799999 59999999998888874 8999999998888887 777532111 1 222222 14899999998
Q ss_pred chh----HHHHHHhhccCCEEEEEec
Q 028523 98 GKM----LDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 98 ~~~----~~~~~~~l~~~G~~v~~g~ 119 (208)
... +......++++..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 543 3333345666776666655
No 432
>PRK01581 speE spermidine synthase; Validated
Probab=96.98 E-value=0.023 Score=44.54 Aligned_cols=99 Identities=9% Similarity=0.028 Sum_probs=63.4
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcC--------C--CeeEecCCCccHHHHHHhH
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFG--------F--DEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g--------~--~~v~~~~~~~~~~~~~~~~ 84 (208)
.....+|||.|+ |.|..+..++++.+. +|+++..+++-.+.++ ++. . +.-+..... +..+.+..
T Consensus 148 h~~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-
Confidence 455679999994 567777777777654 9999999988888887 421 0 111111112 34444443
Q ss_pred CCCCccEEEeCCCc------------hhHHHHHHhhccCCEEEEEec
Q 028523 85 FPEGINIYFENVGG------------KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 85 ~~~~~d~v~d~~g~------------~~~~~~~~~l~~~G~~v~~g~ 119 (208)
..+.+|+||--... +.+..+.+.|+|+|.++.-..
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 33479998754321 146788999999999877643
No 433
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.96 E-value=0.0026 Score=46.09 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=68.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC----Cee--E--ecCCCccHHHHHHhHCCC--C
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF----DEA--F--NYKEEPDLDAALKRYFPE--G 88 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~----~~v--~--~~~~~~~~~~~~~~~~~~--~ 88 (208)
|.+++++|+.||+|+....-+...|+++.++..+.+..+... +|-+ ..+ + |..+..+..+.+++.... .
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 889999999999999988888888999999998888765544 4432 222 2 222222444445544332 6
Q ss_pred ccEEEeCCC-c-h-h---------------HHHHHHhhc-----cCCEEEEEecccc
Q 028523 89 INIYFENVG-G-K-M---------------LDAVLLNMR-----IQGRITLCGMISQ 122 (208)
Q Consensus 89 ~d~v~d~~g-~-~-~---------------~~~~~~~l~-----~~G~~v~~g~~~~ 122 (208)
+|++++..| . + . -..+++.+. +||-++..++.-+
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG 140 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence 899999887 2 2 1 123444443 5788998887665
No 434
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.96 E-value=0.03 Score=42.00 Aligned_cols=96 Identities=16% Similarity=0.224 Sum_probs=62.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
.++.+||=.| +|.|..+..+++. |.+|++++.+++..+.+++. .|...-+..... +..+ +.....+.||+|+
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~ 117 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL 117 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence 4567888887 4667888888875 88999999999887777632 232211111111 2222 2222334799998
Q ss_pred eCC-----C--chhHHHHHHhhccCCEEEEE
Q 028523 94 ENV-----G--GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 94 d~~-----g--~~~~~~~~~~l~~~G~~v~~ 117 (208)
... . ...+..+.+.|+|||.++.+
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 542 2 13578899999999999765
No 435
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.95 E-value=0.011 Score=46.12 Aligned_cols=94 Identities=18% Similarity=0.195 Sum_probs=61.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAK-LVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~-~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
-.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++.++...+.++++...+. ++.+.+ . ..|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l----~-~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEAL----P-EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHH----c-cCCEEEE
Confidence 467899999999999998887775 4565 8999998888777766455421111 222222 1 4899999
Q ss_pred CCCc-hhHHHHHHhhccCCEEEEEeccc
Q 028523 95 NVGG-KMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 95 ~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+++. ..+..-.+.++++-.++.++.+.
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence 8885 33212224556666777777654
No 436
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0072 Score=44.93 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=33.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLK 60 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~ 60 (208)
++++|+||+|++|...++.+...|++|+++++++ ++.+.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~ 43 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA 43 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence 4799999999999999988888899999999876 4444443
No 437
>PLN02686 cinnamoyl-CoA reductase
Probab=96.95 E-value=0.0066 Score=48.07 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=37.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 60 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~ 60 (208)
..+.+|||+||+|.+|..+++.+...|++|++++++.++.+.+.
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45789999999999999999999889999998887766555444
No 438
>PRK04457 spermidine synthase; Provisional
Probab=96.94 E-value=0.026 Score=42.53 Aligned_cols=96 Identities=10% Similarity=0.125 Sum_probs=64.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCC---eeEecCCCccHHHHHHhHCCCCccEE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEPDLDAALKRYFPEGINIY 92 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~~~~d~v 92 (208)
..+.+||+.|+ |.|..+..+++.. +.+++++..+++-.+.+++.++.. .-+..... +..+.+.+. ++.+|+|
T Consensus 65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence 45678999995 4477888888776 469999999999888888555531 11111222 445555432 3469998
Q ss_pred Ee-CCC----------chhHHHHHHhhccCCEEEE
Q 028523 93 FE-NVG----------GKMLDAVLLNMRIQGRITL 116 (208)
Q Consensus 93 ~d-~~g----------~~~~~~~~~~l~~~G~~v~ 116 (208)
+- ... .+.+..+.+.|+++|.++.
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 73 221 1457889999999999876
No 439
>PRK08317 hypothetical protein; Provisional
Probab=96.93 E-value=0.014 Score=42.91 Aligned_cols=104 Identities=21% Similarity=0.321 Sum_probs=67.2
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc-CCCeeEecCCCccHHHHHHhHCCC
Q 028523 11 FEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF-GFDEAFNYKEEPDLDAALKRYFPE 87 (208)
Q Consensus 11 ~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~ 87 (208)
.+...+.++++||-.|+ | .|..+..+++..+ .++++++.+++..+.+++.. .....+..... +... .....+
T Consensus 12 ~~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~--~~~~~~ 86 (241)
T PRK08317 12 FELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG--LPFPDG 86 (241)
T ss_pred HHHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc--CCCCCC
Confidence 35577889999999985 3 4888889998773 59999999998888777321 11111111111 1111 011223
Q ss_pred CccEEEeCC-----C--chhHHHHHHhhccCCEEEEEec
Q 028523 88 GINIYFENV-----G--GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 88 ~~d~v~d~~-----g--~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
.+|+|+... . ...+..+.++|++||.++....
T Consensus 87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 87 SFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred CceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 689887532 2 2367889999999999987653
No 440
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.93 E-value=0.013 Score=42.89 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=60.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
+|.+||=.|+.| |+.. +-...+|++|++++.+++..+.++ ...... -++|... .. +.+... ++.||+|++-
T Consensus 59 ~g~~vLDvGCGg--G~Ls-e~mAr~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~-~~-edl~~~-~~~FDvV~cm 131 (243)
T COG2227 59 PGLRVLDVGCGG--GILS-EPLARLGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA-TV-EDLASA-GGQFDVVTCM 131 (243)
T ss_pred CCCeEEEecCCc--cHhh-HHHHHCCCeeEEecCChHHHHHHH-Hhhhhccccccchhh-hH-HHHHhc-CCCccEEEEh
Confidence 788899888655 4433 444456799999999999888887 322211 2556543 22 222221 1479999752
Q ss_pred -----CC--chhHHHHHHhhccCCEEEEE
Q 028523 96 -----VG--GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 96 -----~g--~~~~~~~~~~l~~~G~~v~~ 117 (208)
+. ...+..+.++++|+|.+...
T Consensus 132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 132 EVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 33 23678899999999998654
No 441
>PRK14967 putative methyltransferase; Provisional
Probab=96.92 E-value=0.02 Score=41.97 Aligned_cols=96 Identities=20% Similarity=0.127 Sum_probs=62.5
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---hcCCCe-eEecCCCccHHHHHHhHCCCC
Q 028523 14 CSPKQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKN---KFGFDE-AFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 14 ~~~~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~~~~~~~~~ 88 (208)
..++++++||-.|+ |. |..++.+++. +. ++++++.++...+.+++ ..+... ++. . ++.+.+ ..+.
T Consensus 32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~---~-d~~~~~---~~~~ 101 (223)
T PRK14967 32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR---G-DWARAV---EFRP 101 (223)
T ss_pred cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---C-chhhhc---cCCC
Confidence 45788899999984 44 8888888875 56 99999999887766553 233322 222 2 333221 2237
Q ss_pred ccEEEeCCC-c---------------------------hhHHHHHHhhccCCEEEEEec
Q 028523 89 INIYFENVG-G---------------------------KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 89 ~d~v~d~~g-~---------------------------~~~~~~~~~l~~~G~~v~~g~ 119 (208)
||+|+...+ . ..+..+.+.|++||+++.+..
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~ 160 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQS 160 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 999987532 0 124567889999999887633
No 442
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.92 E-value=0.0051 Score=45.23 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=47.5
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCC---eeEecCCCccHHHHHHhHCC--CCccEE
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFD---EAFNYKEEPDLDAALKRYFP--EGINIY 92 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~---~v~~~~~~~~~~~~~~~~~~--~~~d~v 92 (208)
+||+|++|++|...++.+...|++|++++++. ++.+...+ ..|.. ...|..+...+.+.+..... +++|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999988888899999998764 33222211 33432 13344443122232322211 268999
Q ss_pred EeCCCc
Q 028523 93 FENVGG 98 (208)
Q Consensus 93 ~d~~g~ 98 (208)
+.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998873
No 443
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=96.92 E-value=0.011 Score=38.43 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=59.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
|.+|+-.| .|.|...+.+++....++++++.++...+.++..+ +.+.-+..... ++.+.......+.+|+|+-.
T Consensus 1 g~~vlD~~--~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n 77 (117)
T PF13659_consen 1 GDRVLDPG--CGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN 77 (117)
T ss_dssp TEEEEEET--STTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred CCEEEEcC--cchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence 46677666 34566666666555579999999999888777433 22211222223 55444433444589999875
Q ss_pred CC-ch--------------hHHHHHHhhccCCEEEEE
Q 028523 96 VG-GK--------------MLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 96 ~g-~~--------------~~~~~~~~l~~~G~~v~~ 117 (208)
.. .. .+..+.+.|+++|.++.+
T Consensus 78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~ 114 (117)
T PF13659_consen 78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI 114 (117)
T ss_dssp -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 43 11 267899999999998775
No 444
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.91 E-value=0.0035 Score=48.98 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=32.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD 54 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~ 54 (208)
++.+|||+||+|.+|...++.+...|.+|++++++++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4678999999999999999999999999999887643
No 445
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.91 E-value=0.034 Score=44.40 Aligned_cols=94 Identities=20% Similarity=0.262 Sum_probs=64.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
-++.++||.|+ |-+|..++.-+...|. +|++.-|+.++.+.+.+++|+ .++.++ +..+.+. .+|+||-+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-~~~~l~---el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-EAVALE---ELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-eeecHH---HHHHhhh-----hCCEEEEe
Confidence 36788999997 9899988888888887 899999999998877779995 333332 2233332 38999999
Q ss_pred CCchh----HHHHHHhhccC-C-EEEEEecc
Q 028523 96 VGGKM----LDAVLLNMRIQ-G-RITLCGMI 120 (208)
Q Consensus 96 ~g~~~----~~~~~~~l~~~-G-~~v~~g~~ 120 (208)
++++. -....+.+++. . -++.++.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 98652 23344444443 2 35555554
No 446
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.90 E-value=0.0058 Score=42.35 Aligned_cols=83 Identities=18% Similarity=0.205 Sum_probs=59.7
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCCeeEecCCC---ccHHHHHHhHCCC--C
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV-DLLKNKFGFDEAFNYKEE---PDLDAALKRYFPE--G 88 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~-~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~--~ 88 (208)
+-.+|-.-||+|+.+++|.+++..+...|+.|+..+-...+- +.++ ++|-.-++.+.+- .+....+...... .
T Consensus 5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgr 83 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGR 83 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence 344667789999999999999999999999988888666654 4555 8987666654432 1444444443333 6
Q ss_pred ccEEEeCCCc
Q 028523 89 INIYFENVGG 98 (208)
Q Consensus 89 ~d~v~d~~g~ 98 (208)
.|..++|.|-
T Consensus 84 ld~~vncagi 93 (260)
T KOG1199|consen 84 LDALVNCAGI 93 (260)
T ss_pred eeeeeeccce
Confidence 8999999984
No 447
>PLN00203 glutamyl-tRNA reductase
Probab=96.89 E-value=0.013 Score=48.44 Aligned_cols=72 Identities=22% Similarity=0.307 Sum_probs=52.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
.+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++... +.++. +..+.+. ..|+||.
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~---dl~~al~-----~aDVVIs 335 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD---EMLACAA-----EADVVFT 335 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh---hHHHHHh-----cCCEEEE
Confidence 3688999996 9999999999988998 89999999998877775664211 11111 2222222 4899999
Q ss_pred CCCc
Q 028523 95 NVGG 98 (208)
Q Consensus 95 ~~g~ 98 (208)
|++.
T Consensus 336 AT~s 339 (519)
T PLN00203 336 STSS 339 (519)
T ss_pred ccCC
Confidence 9884
No 448
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.87 E-value=0.011 Score=42.99 Aligned_cols=101 Identities=16% Similarity=0.094 Sum_probs=62.5
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCCeeEecCCCccHHHHHHhHCCCC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEPDLDAALKRYFPEG 88 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~ 88 (208)
....++++++||-.|+ |.|..+..+++.. .+|+.++.+++-.+.+++. +|...+ +.... +..+.+. ..+.
T Consensus 72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~~~ 144 (212)
T PRK00312 72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHG-DGWKGWP--AYAP 144 (212)
T ss_pred HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEEC-CcccCCC--cCCC
Confidence 4567889999999984 4466666566554 4899999888876666543 344321 11111 1111110 1136
Q ss_pred ccEEEeCCC-chhHHHHHHhhccCCEEEEEec
Q 028523 89 INIYFENVG-GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 89 ~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
||+|+.... ........+.|++||+++..-.
T Consensus 145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 145 FDRILVTAAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred cCEEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence 999887555 3456677889999999876533
No 449
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.86 E-value=0.016 Score=44.34 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=45.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSK---DKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
++.+++|+|+ ||.+.+++..+...|+ +++++.|++ ++.+.+.+.++.. ..+...+. +-...+.+. ...+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEA-LASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhh-cccCCE
Confidence 5679999996 8889887776667888 899999884 3555454355421 11111111 101112111 125899
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
|++|+.
T Consensus 200 vINaTp 205 (288)
T PRK12749 200 LTNGTK 205 (288)
T ss_pred EEECCC
Confidence 999886
No 450
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.85 E-value=0.024 Score=39.64 Aligned_cols=78 Identities=18% Similarity=0.112 Sum_probs=52.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
-.|.+++|.|++..+|..+++.++..|++|+++.++.+ +..+.+. .+|+||.++
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l~~~l~-----~aDiVIsat 95 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------NLKEHTK-----QADIVIVAV 95 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------hHHHHHh-----hCCEEEEcC
Confidence 47899999997334699899999989999888886532 2222222 278999988
Q ss_pred CchhHHHHHHhhccCCEEEEEeccc
Q 028523 97 GGKMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 97 g~~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+.+.+ --.+.++++-.++.++.+.
T Consensus 96 ~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 96 GKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred CCCce-ecHHHccCCeEEEEccCCC
Confidence 86432 2223466666677776643
No 451
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.84 E-value=0.0024 Score=40.79 Aligned_cols=88 Identities=16% Similarity=0.258 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
+|.+|||.|+ |.+|..-++.+...|++|++++... +..+ +.-.. ... .+.+. . .++|+||.+++
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~---~~~-~~~~~----l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQL---IRR-EFEED----L-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEE---EES-S-GGG----C-TTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHH---Hhh-hHHHH----H-hhheEEEecCC
Confidence 5788999996 9999999999999999999999765 2222 11111 111 33111 1 25999999998
Q ss_pred chhH-HHHHHhhccCCEEEEEeccc
Q 028523 98 GKML-DAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 98 ~~~~-~~~~~~l~~~G~~v~~g~~~ 121 (208)
.+.+ ....+..+.-|.++.+...+
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVDDP 94 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred CHHHHHHHHHHHhhCCEEEEECCCc
Confidence 6544 45555556688888876643
No 452
>PLN02928 oxidoreductase family protein
Probab=96.84 E-value=0.012 Score=46.15 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=62.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-----CeeEe-cCCCccHHHHHHhHCCCCcc
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGF-----DEAFN-YKEEPDLDAALKRYFPEGIN 90 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~-----~~v~~-~~~~~~~~~~~~~~~~~~~d 90 (208)
-.|.++.|+| .|.+|...++.++.+|.+|++..++..+... . .++. ....+ .....++.+.+.+ .|
T Consensus 157 l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~L~ell~~-----aD 228 (347)
T PLN02928 157 LFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPE-D-GLLIPNGDVDDLVDEKGGHEDIYEFAGE-----AD 228 (347)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhh-h-hhccccccccccccccCcccCHHHHHhh-----CC
Confidence 3578999999 5999999999999999999999876332111 1 1110 00000 0011144444443 79
Q ss_pred EEEeCCC-ch-----hHHHHHHhhccCCEEEEEecc
Q 028523 91 IYFENVG-GK-----MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 91 ~v~d~~g-~~-----~~~~~~~~l~~~G~~v~~g~~ 120 (208)
+|+.++. .+ .-...+..|+++..+|.++..
T Consensus 229 iVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 229 IVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARG 264 (347)
T ss_pred EEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence 9998876 22 235778889999988888753
No 453
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.84 E-value=0.0057 Score=40.62 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=51.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.-+|-|+|+ |-+|..+...++..|.+|..+. ++.++.+.+.+.++...+.+..+ .. ...|++|-++.
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----------~~-~~aDlv~iavp 77 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----------IL-RDADLVFIAVP 77 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----------GG-CC-SEEEE-S-
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----------cc-ccCCEEEEEec
Confidence 347889996 9999999999999999988775 55556677764455433433221 11 14899999999
Q ss_pred chhHHHHHHhhccC
Q 028523 98 GKMLDAVLLNMRIQ 111 (208)
Q Consensus 98 ~~~~~~~~~~l~~~ 111 (208)
.+.+...++.|...
T Consensus 78 DdaI~~va~~La~~ 91 (127)
T PF10727_consen 78 DDAIAEVAEQLAQY 91 (127)
T ss_dssp CCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHh
Confidence 88888888877654
No 454
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.83 E-value=0.0066 Score=44.76 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=46.5
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---hcCCC-e--eEecCCCccHHHHHHhHC--CCCccEE
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK-DKVDLLKN---KFGFD-E--AFNYKEEPDLDAALKRYF--PEGINIY 92 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~-~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~~~~~~--~~~~d~v 92 (208)
++|+||+|++|...++.+...|++|++++++. ++.+.+.+ +.+.. . ..|..+.......+.+.. .+++|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999888999999888653 33332221 22322 1 234443323333333221 1368899
Q ss_pred EeCCC
Q 028523 93 FENVG 97 (208)
Q Consensus 93 ~d~~g 97 (208)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88776
No 455
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.83 E-value=0.0047 Score=46.25 Aligned_cols=73 Identities=10% Similarity=0.088 Sum_probs=50.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCC-CccEEEeCCCc
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPE-GINIYFENVGG 98 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~ 98 (208)
+|||+||+|- |..++..+...|.+|+++++++...+.+. ..|...+....- +-.+ +.++... ++|+|+|++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~~-l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQE-LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHHH-HHHHHHhcCCCEEEEcCCH
Confidence 6999998775 98888777778999999998988777666 555444432221 2222 4333333 79999998863
No 456
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=96.82 E-value=0.0067 Score=47.46 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=31.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523 20 EYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD 54 (208)
Q Consensus 20 ~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~ 54 (208)
.+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 37999999999999999999989999999987753
No 457
>PRK06849 hypothetical protein; Provisional
Probab=96.82 E-value=0.017 Score=46.15 Aligned_cols=95 Identities=11% Similarity=0.108 Sum_probs=60.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecC--CCccHHHHHHhHCCC-CccEE
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYK--EEPDLDAALKRYFPE-GINIY 92 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~--~~~~~~~~~~~~~~~-~~d~v 92 (208)
...+|||+|+..++|+..++.++..|.+|++++..+....... . .++. .++.. +.+.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s-~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS-R-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH-H-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4578999999888999999999999999999997765433222 1 1222 22211 111466666666555 79999
Q ss_pred EeCCCch-hHHHHHHhhccCCEE
Q 028523 93 FENVGGK-MLDAVLLNMRIQGRI 114 (208)
Q Consensus 93 ~d~~g~~-~~~~~~~~l~~~G~~ 114 (208)
+-+.... ......+.+.+..++
T Consensus 81 IP~~e~~~~~a~~~~~l~~~~~v 103 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAYCEV 103 (389)
T ss_pred EECChHHHhHHhhhhhhcCCcEE
Confidence 9877632 233344556555443
No 458
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.80 E-value=0.011 Score=41.87 Aligned_cols=76 Identities=16% Similarity=0.194 Sum_probs=43.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH-------HHHHHHHhcCCCe---eEecCCCccHHHHHHhHCC--C
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKD-------KVDLLKNKFGFDE---AFNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~-------~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~--~ 87 (208)
++||+||.|++|+..++.+...+. +++.+.++.. ..+.++ +.|..- -.|..+...+.+.+.+... +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 689999999999999888877766 9999998821 233444 445532 1233333233333333322 2
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
+++-||.+.|
T Consensus 81 ~i~gVih~ag 90 (181)
T PF08659_consen 81 PIDGVIHAAG 90 (181)
T ss_dssp -EEEEEE---
T ss_pred Ccceeeeeee
Confidence 5777777766
No 459
>PLN02214 cinnamoyl-CoA reductase
Probab=96.79 E-value=0.015 Score=45.51 Aligned_cols=39 Identities=23% Similarity=0.311 Sum_probs=34.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK 55 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~ 55 (208)
.++.+|||+||+|.+|...++.+...|.+|++++++.++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 457789999999999999999888889999999987654
No 460
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.79 E-value=0.045 Score=40.30 Aligned_cols=90 Identities=14% Similarity=0.226 Sum_probs=57.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCE---EEEEeCC----HHH--------HHHHHHhcCCCeeEecCCCccHHHHH
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCY---VVGSAGS----KDK--------VDLLKNKFGFDEAFNYKEEPDLDAAL 81 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~---v~~~~~s----~~~--------~~~~~~~~g~~~v~~~~~~~~~~~~~ 81 (208)
-++.+++|+|+ |+.|..++..+...|++ +++++++ .++ .++++ .++... . +. ++.+.+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~---~~-~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-T---GG-TLKEAL 95 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-c---cC-CHHHHH
Confidence 46789999996 99999999888888974 8888877 333 22333 443211 1 11 343434
Q ss_pred HhHCCCCccEEEeCCCchhH-HHHHHhhccCCEEEEEe
Q 028523 82 KRYFPEGINIYFENVGGKML-DAVLLNMRIQGRITLCG 118 (208)
Q Consensus 82 ~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g 118 (208)
+ ++|++|++++...+ ...++.|.++..+..+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 2 38999999973333 46667777776655443
No 461
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.77 E-value=0.033 Score=42.84 Aligned_cols=34 Identities=12% Similarity=0.185 Sum_probs=30.4
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeC
Q 028523 18 QGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAG 51 (208)
Q Consensus 18 ~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~ 51 (208)
.|+.++|+|++ +++|.+.++.+...|++|++.++
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 58899999985 89999999999999999999653
No 462
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.77 E-value=0.007 Score=46.78 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=33.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK 55 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~ 55 (208)
.+.+|||+||+|.+|...+..+...|.+|++++++.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 36789999999999999999888889999998877654
No 463
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.77 E-value=0.014 Score=45.05 Aligned_cols=88 Identities=14% Similarity=0.050 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|.+|.|+| .|.+|...++.++.+|.+|++..++.++.+ +..... ... ++.+.+. ..|+|+.+..
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP 199 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence 578999999 599999999999999999999886543311 111111 111 3433333 3788888877
Q ss_pred -chh-----HHHHHHhhccCCEEEEEecc
Q 028523 98 -GKM-----LDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 98 -~~~-----~~~~~~~l~~~G~~v~~g~~ 120 (208)
.+. -...+..|+++..+|.+|..
T Consensus 200 lt~~T~~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCCcEEEECCCc
Confidence 332 24567788888888888764
No 464
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.74 E-value=0.0036 Score=48.42 Aligned_cols=71 Identities=20% Similarity=0.209 Sum_probs=47.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe-eEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
+|+|+||+|.+|...++.+...|.+|+++++++++...+. ..+... ..|..+. +.+.+... ++|.||++.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~----~~l~~~~~-~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDP----ASLRKAVA-GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCH----HHHHHHHh-CCCEEEEece
Confidence 5899999999999999988888999999998776544333 334322 2344332 12322222 4899998875
No 465
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.73 E-value=0.011 Score=50.68 Aligned_cols=78 Identities=12% Similarity=0.044 Sum_probs=48.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeE--ecCCCccHHHHHHhHCCCCccE
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAF--NYKEEPDLDAALKRYFPEGINI 91 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~~~d~ 91 (208)
..+++.+|||+||+|-+|..+++.+... |.+|+++++......... ...-...+ |..+. ...+++... ++|+
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~gDl~d~---~~~l~~~l~-~~D~ 385 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-GHPRFHFVEGDISIH---SEWIEYHIK-KCDV 385 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc-CCCceEEEeccccCc---HHHHHHHhc-CCCE
Confidence 4467889999999999999999887764 789999997665433222 11111222 22221 122222222 5999
Q ss_pred EEeCCC
Q 028523 92 YFENVG 97 (208)
Q Consensus 92 v~d~~g 97 (208)
||.+++
T Consensus 386 ViHlAa 391 (660)
T PRK08125 386 VLPLVA 391 (660)
T ss_pred EEECcc
Confidence 999775
No 466
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.72 E-value=0.013 Score=45.29 Aligned_cols=85 Identities=18% Similarity=0.141 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|.++.|.| .|.+|...+++++.+|.+|++.+++.... ..+. .+ . ++.+.+.+ .|+|.-++.
T Consensus 144 ~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~----~~--~-~l~ell~~-----sDvv~lh~P 205 (311)
T PRK08410 144 KGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEY----ER--V-SLEELLKT-----SDIISIHAP 205 (311)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCc----ee--e-cHHHHhhc-----CCEEEEeCC
Confidence 688999999 69999999999999999999998753210 1111 11 1 33333332 577776655
Q ss_pred -ch-----hHHHHHHhhccCCEEEEEecc
Q 028523 98 -GK-----MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 98 -~~-----~~~~~~~~l~~~G~~v~~g~~ 120 (208)
.+ .-...+..|+++..+|.++..
T Consensus 206 lt~~T~~li~~~~~~~Mk~~a~lIN~aRG 234 (311)
T PRK08410 206 LNEKTKNLIAYKELKLLKDGAILINVGRG 234 (311)
T ss_pred CCchhhcccCHHHHHhCCCCeEEEECCCc
Confidence 22 235667777777777777653
No 467
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.72 E-value=0.003 Score=47.08 Aligned_cols=67 Identities=15% Similarity=0.134 Sum_probs=47.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCch
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGK 99 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 99 (208)
|+|+||+|-||...++..+..|..|++.+|++.+.+... ... +- ..+.+.+....++|.||+-.|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~---v~-------~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPN---VT-------LWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccc---cc-------ccchhhhcccCCCCEEEECCCCc
Confidence 689999999999999999999999999999887655433 111 11 01112222222699999988854
No 468
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.69 E-value=0.0043 Score=45.63 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=32.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKD 54 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~ 54 (208)
++.+++|+|++|++|...++.+...|++|+++.+++.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 40 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK 40 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4678999999999999999888888999999987653
No 469
>PLN02650 dihydroflavonol-4-reductase
Probab=96.66 E-value=0.016 Score=45.53 Aligned_cols=42 Identities=26% Similarity=0.211 Sum_probs=34.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL 59 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~ 59 (208)
...+|||+||+|-+|...+..+...|.+|++++++.++...+
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV 45 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence 346899999999999999998888899999988876554433
No 470
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.65 E-value=0.086 Score=34.17 Aligned_cols=93 Identities=16% Similarity=0.098 Sum_probs=61.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCCchh-
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKM- 100 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~- 100 (208)
|+|.|. |.+|...++.++..+.+|++++.+++..+.++ +.|.. ++.- +. .-.+.+++..-..++.++-+++.+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~g-d~-~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYG-DA-TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES--T-TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-cccc-cc-hhhhHHhhcCccccCEEEEccCCHHH
Confidence 578885 99999999999996669999999999999988 66753 3322 22 2233344433337899998887542
Q ss_pred ---HHHHHHhhccCCEEEEEec
Q 028523 101 ---LDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 101 ---~~~~~~~l~~~G~~v~~g~ 119 (208)
.....+.+.+..+++....
T Consensus 76 n~~~~~~~r~~~~~~~ii~~~~ 97 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIARVN 97 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEEES
T ss_pred HHHHHHHHHHHCCCCeEEEEEC
Confidence 2234444556667665433
No 471
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.64 E-value=0.014 Score=42.69 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=60.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeE---------ecCCCcc-HHHHHHhH
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAF---------NYKEEPD-LDAALKRY 84 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~---------~~~~~~~-~~~~~~~~ 84 (208)
.+.++.+||+.|. |.|.-++-+|. .|.+|++++.|+.-.+.+.++.+..... ....- + +...+.+.
T Consensus 34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v-~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEI-TIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCce-EEEECcccCC
Confidence 3467789999984 67888887775 6999999999999877664344332100 00000 0 00001111
Q ss_pred C--C-CCccEEEeCCC---------chhHHHHHHhhccCCEEEEE
Q 028523 85 F--P-EGINIYFENVG---------GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 85 ~--~-~~~d~v~d~~g---------~~~~~~~~~~l~~~G~~v~~ 117 (208)
. . +.||.|+|..- ...+..+.++|+|||+++.+
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 1 1 25899998542 12578888999999875543
No 472
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.63 E-value=0.025 Score=43.60 Aligned_cols=93 Identities=8% Similarity=-0.050 Sum_probs=64.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHhcCCC--eeEecCCCccHHHHHHhHCCCCccEE
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKL-VGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEPDLDAALKRYFPEGINIY 92 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~-~g~-~v~~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~d~v 92 (208)
....+++|+| +|..|.+.++.+.. .+. +|.+..+++++.+.+.+++... .+. . . +..+.+. ..|+|
T Consensus 123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~--~-~~~~av~-----~aDiV 192 (304)
T PRK07340 123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P--L-DGEAIPE-----AVDLV 192 (304)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E--C-CHHHHhh-----cCCEE
Confidence 4567899999 59999988887764 566 7999999988877666565421 111 1 1 4444443 48999
Q ss_pred EeCCCc-hhHHHHHHhhccCCEEEEEeccc
Q 028523 93 FENVGG-KMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 93 ~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+.|+++ ..+-..+ ++||-++..+|...
T Consensus 193 itaT~s~~Pl~~~~--~~~g~hi~~iGs~~ 220 (304)
T PRK07340 193 VTATTSRTPVYPEA--ARAGRLVVAVGAFT 220 (304)
T ss_pred EEccCCCCceeCcc--CCCCCEEEecCCCC
Confidence 999984 3332333 78999999998764
No 473
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.63 E-value=0.059 Score=40.42 Aligned_cols=97 Identities=10% Similarity=0.133 Sum_probs=65.0
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN 90 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 90 (208)
....++++++||=+|+ |.|..+..+++.. +.+|++++.++.-.+.+++.+....++.. +..+. .....+|
T Consensus 25 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~~---~~~~~fD 95 (258)
T PRK01683 25 ARVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIASW---QPPQALD 95 (258)
T ss_pred hhCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhcc---CCCCCcc
Confidence 3345678899998884 4577788888776 56999999999888888744422222221 22111 1122699
Q ss_pred EEEeCCC-------chhHHHHHHhhccCCEEEEE
Q 028523 91 IYFENVG-------GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 91 ~v~d~~g-------~~~~~~~~~~l~~~G~~v~~ 117 (208)
+|+.... ...+..+.+.|++||.++..
T Consensus 96 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 96 LIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred EEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 9976433 13578889999999998775
No 474
>PLN02427 UDP-apiose/xylose synthase
Probab=96.62 E-value=0.014 Score=46.58 Aligned_cols=76 Identities=14% Similarity=0.094 Sum_probs=49.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCC------Cee--EecCCCccHHHHHHhHCC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGF------DEA--FNYKEEPDLDAALKRYFP 86 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~------~~v--~~~~~~~~~~~~~~~~~~ 86 (208)
..+..+|||+||+|-+|..+++.+... |.+|++++++.++...+. ..+. -+. .|..+. +.+.+...
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~----~~l~~~~~ 85 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHD----SRLEGLIK 85 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCCh----HHHHHHhh
Confidence 344567999999999999999888777 579999997766655443 2221 112 233222 12333222
Q ss_pred CCccEEEeCCC
Q 028523 87 EGINIYFENVG 97 (208)
Q Consensus 87 ~~~d~v~d~~g 97 (208)
++|+||.+.+
T Consensus 86 -~~d~ViHlAa 95 (386)
T PLN02427 86 -MADLTINLAA 95 (386)
T ss_pred -cCCEEEEccc
Confidence 4899999886
No 475
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=96.62 E-value=0.0018 Score=47.86 Aligned_cols=102 Identities=20% Similarity=0.306 Sum_probs=61.4
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc---CCCee--EecCCCccHHHHHHhH
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDEA--FNYKEEPDLDAALKRY 84 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~---g~~~v--~~~~~~~~~~~~~~~~ 84 (208)
+....++|++||=.| .|.|..+..+++..+ .+|++++.|++=++.++++. +...+ +.-+.. ++ .+
T Consensus 41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~l-----p~ 112 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DL-----PF 112 (233)
T ss_dssp HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B-------S
T ss_pred hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hh-----cC
Confidence 335678899998876 466888888898875 49999999999777776432 22211 111101 11 11
Q ss_pred CCCCccEEEeCCCc-------hhHHHHHHhhccCCEEEEEeccc
Q 028523 85 FPEGINIYFENVGG-------KMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 85 ~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
.++.||.|..+.|- ..+.++.+.|+|||+++.+....
T Consensus 113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~ 156 (233)
T PF01209_consen 113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK 156 (233)
T ss_dssp -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence 12369999877662 25889999999999998887643
No 476
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.60 E-value=0.056 Score=43.80 Aligned_cols=104 Identities=16% Similarity=0.214 Sum_probs=63.0
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH-CC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG-CYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY-FP 86 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g-~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~-~~ 86 (208)
....+++|++||=.|+ +.|-.+..+++.++ .+|++++.++++.+.+++ .+|....+..... +.. ..... ..
T Consensus 232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~-d~~-~~~~~~~~ 307 (426)
T TIGR00563 232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDG-DGR-GPSQWAEN 307 (426)
T ss_pred HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecc-ccc-cccccccc
Confidence 3456788999987763 34555566666654 699999999998776654 4565421111111 110 00001 12
Q ss_pred CCccEEEe---CCC-c-------------------------hhHHHHHHhhccCCEEEEEec
Q 028523 87 EGINIYFE---NVG-G-------------------------KMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 87 ~~~d~v~d---~~g-~-------------------------~~~~~~~~~l~~~G~~v~~g~ 119 (208)
+.||.|+- |.| + ..+..+++.|+|||+++..-.
T Consensus 308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc 369 (426)
T TIGR00563 308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC 369 (426)
T ss_pred cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 26999874 444 2 245678889999999987644
No 477
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.59 E-value=0.028 Score=37.21 Aligned_cols=92 Identities=20% Similarity=0.166 Sum_probs=53.2
Q ss_pred EEEEecCCchHHHHHHHHHHH-cCCEEEEEeCCHHH------HHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEE
Q 028523 21 YVFVSAASGAVGQLVGQFAKL-VGCYVVGSAGSKDK------VDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYF 93 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~-~g~~v~~~~~s~~~------~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~ 93 (208)
+|.|+|++|-+|...++.+.. -+.++.....+..+ ...+. ..+...+.-+. ++.+.+.+ +|+++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~-~~~~~~~~v~~---~l~~~~~~-----~DVvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELA-GIGPLGVPVTD---DLEELLEE-----ADVVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHC-TSST-SSBEBS----HHHHTTH------SEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhh-CcCCcccccch---hHHHhccc-----CCEEE
Confidence 589999989999999999987 57787766544431 11111 11111111111 34333332 89999
Q ss_pred eCCCchhHHHHHHhhccCCEEEEEeccc
Q 028523 94 ENVGGKMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 94 d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
|++..+.....++.+...|.-+.+|.+.
T Consensus 73 DfT~p~~~~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 73 DFTNPDAVYDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp EES-HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred EcCChHHhHHHHHHHHhCCCCEEEECCC
Confidence 9998776666666666667766677654
No 478
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.59 E-value=0.029 Score=40.50 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=56.3
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
-+|.+++|.|. |.+|..+++.+...|++|+++++++++.+.+.+.+|+. .++.. ++. ...+|+++.|.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l~-------~~~~Dv~vp~A 93 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EIY-------SVDADVFAPCA 93 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hhc-------cccCCEEEecc
Confidence 36789999995 89999999999999999999999888877776566643 33321 111 11488888665
Q ss_pred C-chhHHHHHHhhc
Q 028523 97 G-GKMLDAVLLNMR 109 (208)
Q Consensus 97 g-~~~~~~~~~~l~ 109 (208)
. +..-...++.|+
T Consensus 94 ~~~~I~~~~~~~l~ 107 (200)
T cd01075 94 LGGVINDDTIPQLK 107 (200)
T ss_pred cccccCHHHHHHcC
Confidence 4 333444455554
No 479
>PLN02240 UDP-glucose 4-epimerase
Probab=96.58 E-value=0.02 Score=44.87 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=30.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCC
Q 028523 19 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGS 52 (208)
Q Consensus 19 g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s 52 (208)
+.+|+|+||+|.+|...++.+...|.+|+++++.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999998888889999998754
No 480
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=96.54 E-value=0.12 Score=42.04 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=65.1
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFP 86 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~--g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~ 86 (208)
...++++|++||=.|+ +.|-.+++++..+ +.+|++++.++++.+.+++ .+|.+.+ ..... +... +.....
T Consensus 231 ~~l~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v-~~~~~-Da~~-l~~~~~ 305 (431)
T PRK14903 231 LLMELEPGLRVLDTCA--APGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSI-EIKIA-DAER-LTEYVQ 305 (431)
T ss_pred HHhCCCCCCEEEEeCC--CccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeE-EEEEC-chhh-hhhhhh
Confidence 3457889998876653 4466667777776 4599999999998877764 4565432 11111 2211 111122
Q ss_pred CCccEEEe---CCCc-h-------------------------hHHHHHHhhccCCEEEEEecc
Q 028523 87 EGINIYFE---NVGG-K-------------------------MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 87 ~~~d~v~d---~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~ 120 (208)
+.||.|+- |+|. . .+..+++.|++||.++..-.+
T Consensus 306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 368 (431)
T PRK14903 306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTCT 368 (431)
T ss_pred ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 36999974 4432 1 156788999999998776553
No 481
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.54 E-value=0.026 Score=43.86 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=58.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAK-LVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~-~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
.|.++.|.| .|.+|...++.++ .+|.+|+..++.... +... .++.. +. ++.+.+.+ .|+|.-+.
T Consensus 144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~-~~~~-~~~~~----~~---~l~ell~~-----sDvv~lh~ 208 (323)
T PRK15409 144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHK-EAEE-RFNAR----YC---DLDTLLQE-----SDFVCIIL 208 (323)
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCch-hhHH-hcCcE----ec---CHHHHHHh-----CCEEEEeC
Confidence 578999999 5999999999998 899999988765322 1122 34431 11 33333332 67777766
Q ss_pred C-ch-----hHHHHHHhhccCCEEEEEecc
Q 028523 97 G-GK-----MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 97 g-~~-----~~~~~~~~l~~~G~~v~~g~~ 120 (208)
. .+ .-...+..|+++..+|.++..
T Consensus 209 plt~~T~~li~~~~l~~mk~ga~lIN~aRG 238 (323)
T PRK15409 209 PLTDETHHLFGAEQFAKMKSSAIFINAGRG 238 (323)
T ss_pred CCChHHhhccCHHHHhcCCCCeEEEECCCc
Confidence 5 32 124577778888777777653
No 482
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=96.54 E-value=0.052 Score=42.18 Aligned_cols=87 Identities=20% Similarity=0.182 Sum_probs=59.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAG-SKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENV 96 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 96 (208)
.|.++.|+| .|.+|...++.++.+|.+|++.++ +...... ..+. .-. . ++.+.+.+ .|++...+
T Consensus 141 ~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~---~~~~---~~~--~-~Ld~lL~~-----sDiv~lh~ 205 (324)
T COG0111 141 AGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAG---VDGV---VGV--D-SLDELLAE-----ADILTLHL 205 (324)
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhc---cccc---eec--c-cHHHHHhh-----CCEEEEcC
Confidence 378999999 599999999999999999999997 3322111 1111 111 1 34444443 68888776
Q ss_pred C-ch-----hHHHHHHhhccCCEEEEEec
Q 028523 97 G-GK-----MLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 97 g-~~-----~~~~~~~~l~~~G~~v~~g~ 119 (208)
. .+ .-...+..|++|..++.++.
T Consensus 206 PlT~eT~g~i~~~~~a~MK~gailIN~aR 234 (324)
T COG0111 206 PLTPETRGLINAEELAKMKPGAILINAAR 234 (324)
T ss_pred CCCcchhcccCHHHHhhCCCCeEEEECCC
Confidence 6 32 23567788888888887765
No 483
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.52 E-value=0.053 Score=42.32 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=59.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.|.+|.|+| .|.+|...++.++..|.+|++.+++++...... . +. . ++.+.+. ..|+|+.++.
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~-~--------~~-~-~l~ell~-----~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLDFL-T--------YK-D-SVKEAIK-----DADIISLHVP 207 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhh-h--------cc-C-CHHHHHh-----cCCEEEEeCC
Confidence 577899999 599999999999999999999998765422111 0 11 1 3333333 3788888877
Q ss_pred c-h-----hHHHHHHhhccCCEEEEEecc
Q 028523 98 G-K-----MLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 98 ~-~-----~~~~~~~~l~~~G~~v~~g~~ 120 (208)
. + .....+..|+++..+|.++..
T Consensus 208 ~t~~t~~li~~~~l~~mk~gavlIN~aRG 236 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKGAILVNAARG 236 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCCcEEEEcCCc
Confidence 3 2 234566778888888887653
No 484
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.52 E-value=0.018 Score=41.34 Aligned_cols=102 Identities=11% Similarity=0.088 Sum_probs=61.8
Q ss_pred HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhH
Q 028523 8 AGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 8 ~~l~~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~ 84 (208)
..+.+.....++.+||-.|+ |.|..+..+++ .|.+|++++.++.-.+.+++ ..+.. +..... +... ...
T Consensus 20 ~~l~~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~--~~~ 91 (195)
T TIGR00477 20 SAVREAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA--AAL 91 (195)
T ss_pred HHHHHHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh--ccc
Confidence 34444455556778998884 56777777776 47899999999887666542 22322 111111 1111 011
Q ss_pred CCCCccEEEeCC-----C----chhHHHHHHhhccCCEEEEEe
Q 028523 85 FPEGINIYFENV-----G----GKMLDAVLLNMRIQGRITLCG 118 (208)
Q Consensus 85 ~~~~~d~v~d~~-----g----~~~~~~~~~~l~~~G~~v~~g 118 (208)
.+.+|+|+... . ...+..+.+.|+|||.++.+.
T Consensus 92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 23699997642 2 135778888999999965553
No 485
>PLN00198 anthocyanidin reductase; Provisional
Probab=96.50 E-value=0.018 Score=45.00 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=33.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK 55 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~ 55 (208)
.+.+|||+||+|.+|...++.+...|++|++++++.+.
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~ 45 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN 45 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 47889999999999999999888889999888876544
No 486
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.50 E-value=0.07 Score=40.20 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=64.8
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhcC------CCeeEecCCCccHHHHHHhH
Q 028523 13 VCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKFG------FDEAFNYKEEPDLDAALKRY 84 (208)
Q Consensus 13 ~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~g------~~~v~~~~~~~~~~~~~~~~ 84 (208)
...++++++||-.|+ |.|..+..+++..+ .+|++++.|++-.+.+++... .+.+ ..... +..+ + ..
T Consensus 68 ~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i-~~~~~-d~~~-l-p~ 141 (261)
T PLN02233 68 WSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNI-EWIEG-DATD-L-PF 141 (261)
T ss_pred HhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCe-EEEEc-cccc-C-CC
Confidence 346788999998884 44667777887765 599999999998777763322 1111 11111 1110 0 11
Q ss_pred CCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEecc
Q 028523 85 FPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGMI 120 (208)
Q Consensus 85 ~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~~ 120 (208)
.++.||.|+-..+ ...+.++.+.|+|||+++.+...
T Consensus 142 ~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 142 DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 1236999976432 23588999999999999887553
No 487
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.49 E-value=0.065 Score=41.42 Aligned_cols=87 Identities=20% Similarity=0.200 Sum_probs=60.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
.-+|.+|.|+| .|.+|...++.++..|.+|++..++....+.+. ..|.. +. ++.+.++ ..|+|+-+
T Consensus 13 ~LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~-~~G~~-v~------sl~Eaak-----~ADVV~ll 78 (335)
T PRK13403 13 LLQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAK-ADGFE-VM------SVSEAVR-----TAQVVQML 78 (335)
T ss_pred hhCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHH-HcCCE-EC------CHHHHHh-----cCCEEEEe
Confidence 34688999999 599999999999999999998876655555555 55652 21 3344443 37999988
Q ss_pred CCch----hH-HHHHHhhccCCEEEE
Q 028523 96 VGGK----ML-DAVLLNMRIQGRITL 116 (208)
Q Consensus 96 ~g~~----~~-~~~~~~l~~~G~~v~ 116 (208)
++.+ .+ ...+..|+++..++.
T Consensus 79 LPd~~t~~V~~~eil~~MK~GaiL~f 104 (335)
T PRK13403 79 LPDEQQAHVYKAEVEENLREGQMLLF 104 (335)
T ss_pred CCChHHHHHHHHHHHhcCCCCCEEEE
Confidence 8732 22 356777888765544
No 488
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.48 E-value=0.047 Score=41.57 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=54.8
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeC
Q 028523 16 PKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFEN 95 (208)
Q Consensus 16 ~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~ 95 (208)
--.|.+++|.|+++-+|...+.++...|++|+++.+.. + ++.+.++ .+|+++.+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~~-----~aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELVK-----QADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHhc-----cCCEEEEc
Confidence 35789999999755599999999999999777766421 1 1111111 38999999
Q ss_pred CCchhHHHHHHhhccCCEEEEEeccc
Q 028523 96 VGGKMLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 96 ~g~~~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+|.+.+ --.+.++++-.++.+|...
T Consensus 210 tG~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 210 VGKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred cCCCCc-CCHHHcCCCCEEEEEEEee
Confidence 985432 2235688888888887643
No 489
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=96.47 E-value=0.15 Score=37.28 Aligned_cols=106 Identities=10% Similarity=0.092 Sum_probs=68.3
Q ss_pred CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHhcCCCeeEe--cCCCccHHHHHHhHCC--
Q 028523 16 PKQGEYVFVSAAS--GAVGQLVGQFAKLVGCYVVGSAGSKDKV---DLLKNKFGFDEAFN--YKEEPDLDAALKRYFP-- 86 (208)
Q Consensus 16 ~~~g~~vli~ga~--g~vG~~a~qla~~~g~~v~~~~~s~~~~---~~~~~~~g~~~v~~--~~~~~~~~~~~~~~~~-- 86 (208)
+-.|++.||.|-. .+++--.++.++..|+++..|...++-. +.+.+++|.+.++. ..+...+.+...++..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 3468999999843 4677778899999999999999887533 33333666655443 3332133333333332
Q ss_pred CCccEEEeCCCc-h-----------------------------hHHHHHHhhccCCEEEEEeccc
Q 028523 87 EGINIYFENVGG-K-----------------------------MLDAVLLNMRIQGRITLCGMIS 121 (208)
Q Consensus 87 ~~~d~v~d~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 121 (208)
+++|.++.+++. + ....+..+|++||.++.+.-..
T Consensus 83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlg 147 (259)
T COG0623 83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLG 147 (259)
T ss_pred CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecc
Confidence 379999888762 2 0245667888999888776544
No 490
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.46 E-value=0.18 Score=35.83 Aligned_cols=98 Identities=16% Similarity=0.219 Sum_probs=62.8
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---hcCCCeeEecCCCccHHHHHHhHCCC
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEPDLDAALKRYFPE 87 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~ 87 (208)
....+.++++||=.|+ |.|..++.+++.. +.+|++++.+++..+.+++ .++...+ ..... +.... ..+
T Consensus 25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i-~~~~~-d~~~~----~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNI-DIIPG-EAPIE----LPG 96 (187)
T ss_pred HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCe-EEEec-Cchhh----cCc
Confidence 4456778899988873 4477777777765 4699999999987766653 3343221 11111 21111 123
Q ss_pred CccEEEeCCC----chhHHHHHHhhccCCEEEEE
Q 028523 88 GINIYFENVG----GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 88 ~~d~v~d~~g----~~~~~~~~~~l~~~G~~v~~ 117 (208)
.+|+|+.... ...+..+.+.|+++|+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 6999986432 13567889999999998764
No 491
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.46 E-value=0.011 Score=46.83 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=33.0
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 028523 17 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK 53 (208)
Q Consensus 17 ~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~ 53 (208)
..+.+|||+||+|-+|..++..+...|.+|+++++..
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 4678999999999999999999998999999998654
No 492
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.45 E-value=0.24 Score=36.96 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=60.6
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEe
Q 028523 15 SPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFE 94 (208)
Q Consensus 15 ~~~~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d 94 (208)
...++++||-.|+ | .|..+..+++ .|.++++++.+++..+.+++.......+.. +... + ...++.||+|+.
T Consensus 39 ~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~----d~~~-~-~~~~~~fD~V~s 109 (251)
T PRK10258 39 PQRKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG----DIES-L-PLATATFDLAWS 109 (251)
T ss_pred CccCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc----Cccc-C-cCCCCcEEEEEE
Confidence 3446788999885 3 2655555544 578999999999988888733322222211 1111 0 112236999986
Q ss_pred CCC-------chhHHHHHHhhccCCEEEEEec
Q 028523 95 NVG-------GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 95 ~~g-------~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
... ...+..+.+.|+|||.++....
T Consensus 110 ~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 110 NLAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred CchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 532 1357888999999999987644
No 493
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=96.45 E-value=0.0031 Score=47.95 Aligned_cols=66 Identities=17% Similarity=0.109 Sum_probs=44.1
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
|||+||+|-+|...++.+...|.+|+++++++....... ..+ +.+.... .... .. .++|+||.+.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~---~~~~~~~-~~~~----~~-~~~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-WEG---YKPWAPL-AESE----AL-EGADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-cee---eeccccc-chhh----hc-CCCCEEEECCC
Confidence 689999999999999988888999999998876543322 111 1111111 1111 11 25999999887
No 494
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.43 E-value=0.03 Score=41.18 Aligned_cols=100 Identities=13% Similarity=0.153 Sum_probs=64.5
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHhc---CCCe--eEecCCCccHHHHHHhH
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLVG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEPDLDAALKRY 84 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~g--~~v~~~~~s~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~~~~~ 84 (208)
....++++++||=.|+ |.|..+..+++..+ .+|++++.+++..+.+++.+ +.+. ++.. +... + ..
T Consensus 39 ~~l~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~----d~~~-~-~~ 110 (231)
T TIGR02752 39 KRMNVQAGTSALDVCC--GTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG----NAME-L-PF 110 (231)
T ss_pred HhcCCCCCCEEEEeCC--CcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe----chhc-C-CC
Confidence 4456788999998884 55777778887764 59999999988777766432 2222 2211 1111 0 11
Q ss_pred CCCCccEEEeCCC-------chhHHHHHHhhccCCEEEEEec
Q 028523 85 FPEGINIYFENVG-------GKMLDAVLLNMRIQGRITLCGM 119 (208)
Q Consensus 85 ~~~~~d~v~d~~g-------~~~~~~~~~~l~~~G~~v~~g~ 119 (208)
..+.+|+|+-... ...+..+.+.|++||.++....
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 111 DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 2236999975422 1256778899999999987644
No 495
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=96.42 E-value=0.012 Score=45.19 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=43.8
Q ss_pred EEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCCeeE-ecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 22 VFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAF-NYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 22 vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
|||+||+|.+|..+++.+...|. .|+++.++.... .+. .++...+. +..+. +..+.+.+..-.++|+|+.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLADLVIADYIDKE-DFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhhheeeeccCcch-hHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999998 788776543322 222 22221121 12111 2223332211136999999886
No 496
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.42 E-value=0.085 Score=39.55 Aligned_cols=95 Identities=14% Similarity=0.137 Sum_probs=64.8
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCcc
Q 028523 12 EVCSPKQGEYVFVSAASGAVGQLVGQFAKLV-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN 90 (208)
Q Consensus 12 ~~~~~~~g~~vli~ga~g~vG~~a~qla~~~-g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d 90 (208)
......++++||=.|+ |.|..+..+++.. +.+|++++.|+.-.+.++ +-+.+-+ . . +..+ + ...+.||
T Consensus 23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~~-~---~-d~~~-~--~~~~~fD 91 (255)
T PRK14103 23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDAR-T---G-DVRD-W--KPKPDTD 91 (255)
T ss_pred HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcEE-E---c-Chhh-C--CCCCCce
Confidence 4455678899998884 4477777888765 679999999998888887 5443322 1 1 3221 1 1123799
Q ss_pred EEEeCCC-------chhHHHHHHhhccCCEEEEE
Q 028523 91 IYFENVG-------GKMLDAVLLNMRIQGRITLC 117 (208)
Q Consensus 91 ~v~d~~g-------~~~~~~~~~~l~~~G~~v~~ 117 (208)
+|+.... ...+..+.+.|+|||.++..
T Consensus 92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 9987442 23577888999999998765
No 497
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=96.42 E-value=0.0038 Score=38.70 Aligned_cols=82 Identities=18% Similarity=0.279 Sum_probs=52.4
Q ss_pred chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCe--eEecCCCccHHHHHHhHCCCCccEEEeCCC-------ch
Q 028523 29 GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEPDLDAALKRYFPEGINIYFENVG-------GK 99 (208)
Q Consensus 29 g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-------~~ 99 (208)
.|.|..+..+++.-+.++++++.+++..+.+++...... +...+.. ++ .+.++.||.|+.... ..
T Consensus 5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~ 78 (95)
T PF08241_consen 5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA 78 (95)
T ss_dssp -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence 357888888888866799999999998888884443322 2111111 11 122236899976432 13
Q ss_pred hHHHHHHhhccCCEEEE
Q 028523 100 MLDAVLLNMRIQGRITL 116 (208)
Q Consensus 100 ~~~~~~~~l~~~G~~v~ 116 (208)
.+.++.+.|+|+|+++.
T Consensus 79 ~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 79 ALREIYRVLKPGGRLVI 95 (95)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHcCcCeEEeC
Confidence 57899999999999873
No 498
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.41 E-value=0.017 Score=40.03 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=45.7
Q ss_pred EEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH-------HHHHHhcCCCe-e--EecCCCccHHHHHHhHCC--C
Q 028523 21 YVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKDKV-------DLLKNKFGFDE-A--FNYKEEPDLDAALKRYFP--E 87 (208)
Q Consensus 21 ~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~~~-------~~~~~~~g~~~-v--~~~~~~~~~~~~~~~~~~--~ 87 (208)
+++|.||+|++|..+++.+...|. .|+.+.++++.. +.++ +.+... . .|..+...+.+.+.+... +
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELE-ALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 589999999999999988888887 677777765432 2222 233321 2 233322122333333221 3
Q ss_pred CccEEEeCCC
Q 028523 88 GINIYFENVG 97 (208)
Q Consensus 88 ~~d~v~d~~g 97 (208)
++|.++.+.+
T Consensus 81 ~id~li~~ag 90 (180)
T smart00822 81 PLRGVIHAAG 90 (180)
T ss_pred CeeEEEEccc
Confidence 5899998876
No 499
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.40 E-value=0.082 Score=38.89 Aligned_cols=103 Identities=14% Similarity=0.119 Sum_probs=58.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEeCCHH-------------------HHHHHHH---hcCCC-eeEecCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGC-YVVGSAGSKD-------------------KVDLLKN---KFGFD-EAFNYKE 73 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~-~v~~~~~s~~-------------------~~~~~~~---~~g~~-~v~~~~~ 73 (208)
+..+|+|.|. ||||-+++..+-..|. ++..++...- +.+.+++ ++.+. ++--.++
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 4678999995 9999999998888887 6666553211 1111111 22221 1211111
Q ss_pred CccHHHHHHhHCCCCccEEEeCCCc-hhHHHHHH-hhccCCEEEEEecccc
Q 028523 74 EPDLDAALKRYFPEGINIYFENVGG-KMLDAVLL-NMRIQGRITLCGMISQ 122 (208)
Q Consensus 74 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~-~l~~~G~~v~~g~~~~ 122 (208)
. =..+.+.++...++|+|+||... ..-...+. |.+.+=.++..+...+
T Consensus 108 f-~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 F-ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred h-hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 1 12233445555589999999995 33333334 5555556777666543
No 500
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.40 E-value=0.032 Score=46.44 Aligned_cols=71 Identities=25% Similarity=0.326 Sum_probs=50.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCCeeEecCCCccHHHHHHhHCCCCccEEEeCCC
Q 028523 18 QGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVG 97 (208)
Q Consensus 18 ~g~~vli~ga~g~vG~~a~qla~~~g~~v~~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 97 (208)
.+.+++|+|+ |++|.+++..+...|++|+++.++.++.+.+.+.++.. .+.+. +.. +......|++++|++
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~---~~~----~~~~~~~diiINtT~ 448 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLA---DLE----NFHPEEGMILANTTS 448 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHh---Hhh----hhccccCeEEEeccc
Confidence 4678999997 89999999999999999999999888777766466432 22221 111 111124789998876
Done!