BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028531
(208 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435751|ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Vitis vinifera]
gi|297746470|emb|CBI16526.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/215 (80%), Positives = 183/215 (85%), Gaps = 10/215 (4%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
++NRF RR FCTA RPWLFVGLGNPGDKYKGTRHNVGFEMI+AFAESQGI M+TVHCKA
Sbjct: 1 MLNRFSRRLFCTASPRPWLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKA 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
FGQGFV PV LAKPQTYMNLSGES GPLAAYYKLPLNRV+VFHDDM LPCGVLRL H
Sbjct: 61 IFGQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVVVFHDDMSLPCGVLRLHH 120
Query: 122 NGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GGHG HNGLKSV+ +FR GIG+PPGQMDPKAFLLQKF+A ARERID ALQ
Sbjct: 121 KGGHGNHNGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATARERIDAALQ 180
Query: 172 EGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 206
EGV VLKLL SKGLTESAR FNT QKYKHIR+QNM
Sbjct: 181 EGVGVLKLLSSKGLTESARCFNTEQKYKHIRVQNM 215
>gi|449452694|ref|XP_004144094.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 183/218 (83%), Gaps = 11/218 (5%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK 60
+ ++ +RGFCTA++ RPWLFVGLGNPG+K++GTRHNVGFEMID FAES GISMN VHCK
Sbjct: 1 MFSKLTKRGFCTAISSRPWLFVGLGNPGEKFRGTRHNVGFEMIDVFAESIGISMNRVHCK 60
Query: 61 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
A FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL+
Sbjct: 61 AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
Query: 121 HNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
HNGGHG HNGLKSV+ +FR GIGRPPGQMDPKAFLLQKFN A+ERIDTAL
Sbjct: 121 HNGGHGYHNGLKSVIYHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTAL 180
Query: 171 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
QEGV LKLLLS L ESARHFN QKYKHIRLQ MP
Sbjct: 181 QEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218
>gi|449493540|ref|XP_004159339.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 183/218 (83%), Gaps = 11/218 (5%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK 60
+ ++ +RGFCTA++ RPWLFVGLGNPG+K++GTRHNVGFEMID FAES GI MN VHCK
Sbjct: 1 MFSKLTKRGFCTAISSRPWLFVGLGNPGEKFRGTRHNVGFEMIDVFAESVGIPMNRVHCK 60
Query: 61 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
A FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL+
Sbjct: 61 AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMTLPCGVLRLQ 120
Query: 121 HNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
HNGGHG HNGLKSV+++FR GIGRPPGQMDPKAFLLQKFN A+ERIDTAL
Sbjct: 121 HNGGHGYHNGLKSVISHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTAL 180
Query: 171 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
QEGV LKLLLS L ESARHFN QKYKHIRLQ MP
Sbjct: 181 QEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218
>gi|449493552|ref|XP_004159345.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 342 bits (876), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 182/218 (83%), Gaps = 11/218 (5%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK 60
+ N+ +RGFCTA++ RPWLF+GLGNPG+K++GTRHNVGFEMID FAES GISMN VHCK
Sbjct: 1 MFNKLTKRGFCTAISSRPWLFMGLGNPGEKFRGTRHNVGFEMIDVFAESIGISMNRVHCK 60
Query: 61 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
A FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL+
Sbjct: 61 AVFGEGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
Query: 121 HNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
HNGGH H GLKSV+ +FR GIGRPPGQMD KAFLLQKFN A+ERIDTAL
Sbjct: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
Query: 171 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
QEGV LKLLLS GL+ESARHFN QKYKHIRLQ MP
Sbjct: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 218
>gi|449452658|ref|XP_004144076.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 182/218 (83%), Gaps = 11/218 (5%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK 60
+ N+ +RGFCTA++ RPWLF+GLGNPG+K++GTRHNVGFEMID FAES GISMN VHCK
Sbjct: 1 MFNKLTKRGFCTAISSRPWLFMGLGNPGEKFRGTRHNVGFEMIDVFAESIGISMNRVHCK 60
Query: 61 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
A FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL+
Sbjct: 61 AVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLQ 120
Query: 121 HNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
HNGGH H GLKSV+ +FR GIGRPPGQMD KAFLLQKFN A+ERIDTAL
Sbjct: 121 HNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTAL 180
Query: 171 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
QEGV LKLLLS GL+ESARHFN QKYKHIRLQ MP
Sbjct: 181 QEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 218
>gi|358248836|ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycine max]
gi|255645293|gb|ACU23143.1| unknown [Glycine max]
Length = 218
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 164/217 (75%), Positives = 180/217 (82%), Gaps = 10/217 (4%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
+++R RR FCT RPWLFVGLGNPGDK+KGTRHNVGFEMIDAFAESQGI M+TVH KA
Sbjct: 1 MLHRLSRRCFCTFTPRPWLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
FG+GFVG+ PV LAKPQTYMNLSGESTGPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 61 IFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHD 120
Query: 122 NGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GGHG H GLKSV+ NFR GIG PPGQMDPKAFLLQKFN AR+RID ALQ
Sbjct: 121 KGGHGSHKGLKSVIYNFRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQ 180
Query: 172 EGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
EG++ LKLLLSKGLTESA+ FN QKYKH+R+QN+P
Sbjct: 181 EGIDALKLLLSKGLTESAKRFNKEQKYKHLRVQNLPV 217
>gi|356512501|ref|XP_003524957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Glycine
max]
Length = 217
Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 177/217 (81%), Gaps = 10/217 (4%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
++NR RR FCT RPWLFVGLGNPG+K+KGTRHNVGFEMIDAFAESQGI M+TVH KA
Sbjct: 1 MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
G+GFVG+ PV LAKPQTYMNLSGESTGPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 61 ISGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHD 120
Query: 122 NGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GGHG H GLKSV+ +F+ GIG PPGQMDPKAFLLQKFN AR+RID ALQ
Sbjct: 121 KGGHGSHKGLKSVIYHFKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQ 180
Query: 172 EGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
EGV+ LKLLLSKGL SA+ FN QKYKH+R+QN+P
Sbjct: 181 EGVDALKLLLSKGLAVSAKRFNKEQKYKHLRVQNLPV 217
>gi|255582564|ref|XP_002532065.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223528269|gb|EEF30320.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 217
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 175/217 (80%), Gaps = 10/217 (4%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
++N+ RR FCT +RPWL VGLGNPGDKYKGTRHNVGFEMIDAFA+ I M+ +H KA
Sbjct: 1 MLNKVCRRCFCTVASRPWLIVGLGNPGDKYKGTRHNVGFEMIDAFAQLLQIPMDKLHSKA 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
FG+GFVG+A VLLAKPQTYMNLSGES GPLAAYYKLPLNRV+V HDDM LPCGVLRL+
Sbjct: 61 IFGEGFVGEASVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVLHDDMDLPCGVLRLQP 120
Query: 122 NGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GGHG HNGLKSV+++FR GIGRPPGQMDPKAFLLQKFNA A++RIDTA+
Sbjct: 121 KGGHGSHNGLKSVIHHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATAQKRIDTAIP 180
Query: 172 EGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
EG LK +L KGLTE+AR FN QKYKHIRLQ MP
Sbjct: 181 EGAAALKSILFKGLTETARCFNQEQKYKHIRLQTMPT 217
>gi|224052908|ref|XP_002297632.1| predicted protein [Populus trichocarpa]
gi|222844890|gb|EEE82437.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 175/220 (79%), Gaps = 15/220 (6%)
Query: 2 LINRFLRRGFCTAVA-----RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT 56
++NR RR FCTA A PWLFVGLGNPG+K+KGTRHNVGFEMIDAFA S GISMN
Sbjct: 1 MLNRVSRRCFCTAAAAPTTLSPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAGSLGISMNI 60
Query: 57 VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGV 116
CKA FG+GFVGDAPVLLAKPQTYMNLSGES GPLAAYYKLPLNRV+VFHDDM LPCGV
Sbjct: 61 PLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGV 120
Query: 117 LRLRHNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERI 166
LRL+ GGHG H GLKSV+N+FR GIGRPPGQMDPKAFLLQKFNA ARERI
Sbjct: 121 LRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERI 180
Query: 167 DTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 206
D AL EGV L+ +L +GLT +AR FN QKYK+IR + M
Sbjct: 181 DAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETM 220
>gi|297808049|ref|XP_002871908.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
gi|297317745|gb|EFH48167.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 171/217 (78%), Gaps = 10/217 (4%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
+++ RR +CT+V RPWLF+GLGNPGDKYKGTRHN+GFEMID FAES GI MN V+ KA
Sbjct: 1 MLSMLSRRCYCTSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKA 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRL+
Sbjct: 61 IMGQGFVDDLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQE 120
Query: 122 NGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GGHG HNGLKSVMN+FR GIG PPGQMDPKAFLLQKF+ ARER+D AL
Sbjct: 121 KGGHGCHNGLKSVMNHFRGNREFARLRIGIGNPPGQMDPKAFLLQKFSVPARERMDKALA 180
Query: 172 EGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 208
EGV+ LKL+LSK ES R FN QKYKH+R + A
Sbjct: 181 EGVDALKLVLSKDFGESWRLFNVEQKYKHLRQHTIIA 217
>gi|79517018|ref|NP_197484.4| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
gi|75291353|sp|Q6NLS8.1|PTHM_ARATH RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; AltName: Full=Mitochondrial CRS2-like
protein; AltName: Full=Mitochondrial RNA splicing
factor; Flags: Precursor
gi|44681342|gb|AAS47611.1| At5g19830 [Arabidopsis thaliana]
gi|45773870|gb|AAS76739.1| At5g19830 [Arabidopsis thaliana]
gi|110735763|dbj|BAE99859.1| peptidyl tRNA hydrolases-like putative protein [Arabidopsis
thaliana]
gi|332005370|gb|AED92753.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 219
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 171/212 (80%), Gaps = 11/212 (5%)
Query: 2 LINRFLRRGFCTA-VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK 60
+++R RR +CT+ V RPWLF+GLGNPGDKYKGTRHN+GFEMID FAES GI MN V+ K
Sbjct: 1 MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFK 60
Query: 61 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
A GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRL+
Sbjct: 61 AIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQ 120
Query: 121 HNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
GGHG HNGLKSVMN+FR GIG+PPGQMDPKAFLLQKF+ ARER+D AL
Sbjct: 121 EKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKAL 180
Query: 171 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 202
EGV+ LKL+L+K ES R FN QKYKH++
Sbjct: 181 AEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212
>gi|224052914|ref|XP_002297633.1| predicted protein [Populus trichocarpa]
gi|222844891|gb|EEE82438.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/220 (67%), Positives = 163/220 (74%), Gaps = 27/220 (12%)
Query: 2 LINRFLRRGFCTAVA-----RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT 56
++NR RR FCTA A PWLFVGLGNPG+K+KGTRHN ISMN
Sbjct: 1 MLNRVSRRCFCTAAAAPTTPSPWLFVGLGNPGEKFKGTRHNAW------------ISMNI 48
Query: 57 VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGV 116
CKA FG+GFVGDAPVLLAKPQTYMNLSGES GPLAAYYKLPLNRV+VFHDDM LPCGV
Sbjct: 49 PLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGV 108
Query: 117 LRLRHNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERI 166
LRL+ GGHG H GLKSV+N+FR GIGRPPGQMDPKAFLLQKFNA ARERI
Sbjct: 109 LRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERI 168
Query: 167 DTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 206
D AL EGV L+ +L +GLT +AR FN QKYK+IR + M
Sbjct: 169 DAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETM 208
>gi|255642567|gb|ACU21547.1| unknown [Glycine max]
Length = 202
Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/199 (69%), Positives = 155/199 (77%), Gaps = 10/199 (5%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
++NR RR FCT RPWLFVGLGNPG+K+KGTRHNVGFEMIDA AESQGI M+TVH KA
Sbjct: 1 MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHNVGFEMIDALAESQGIPMDTVHSKA 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
G+GFVG+ PV LAKPQTYMNLSGES GPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 61 ISGKGFVGEVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHD 120
Query: 122 NGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GGHG H GLKSV+ +F+ GIG PPGQMDPKAFLLQKFN AR+RID ALQ
Sbjct: 121 KGGHGSHKGLKSVIYHFKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQ 180
Query: 172 EGVEVLKLLLSKGLTESAR 190
EGV+ L + + +E R
Sbjct: 181 EGVDALSSFIQRFGSECKR 199
>gi|326507536|dbj|BAK03161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 159/197 (80%), Gaps = 10/197 (5%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 74
V +PWLF+GLGNPG+KY+ TRHNVGF+MIDAFAESQGIS+ T H KA FG+G V PVL
Sbjct: 34 VIQPWLFIGLGNPGEKYQSTRHNVGFDMIDAFAESQGISLTTHHFKALFGEGVVDGVPVL 93
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAKPQTY+NLSGES G LAAYYKLPL+RV+V +DD LPCGVLRL+ GG+G HNGLKSV
Sbjct: 94 LAKPQTYINLSGESAGALAAYYKLPLHRVIVAYDDTDLPCGVLRLQPKGGYGRHNGLKSV 153
Query: 135 MNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
+ +FR GIGRPPGQMDPKAF+LQKFN RERID+A++EG +LK++++KG
Sbjct: 154 IYHFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGRERIDSAIKEGCGILKMVVTKG 213
Query: 185 LTESARHFNTIQKYKHI 201
LTE+AR N QKYKH+
Sbjct: 214 LTEAARVSNVDQKYKHL 230
>gi|414866788|tpg|DAA45345.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 239
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 158/196 (80%), Gaps = 10/196 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF+MIDAFA+SQGI + T + KA FG+G V PVLLA
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLLA 94
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNGLKSV+
Sbjct: 95 KPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVIY 154
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+FR GIGRP GQMDPKAF+LQKFN RERID+A++EGV++LK++ ++GLT
Sbjct: 155 HFRKNREFCRLRIGIGRPAGQMDPKAFVLQKFNRTGRERIDSAVREGVDILKMVAARGLT 214
Query: 187 ESARHFNTIQKYKHIR 202
E+A+ N QKYKH+R
Sbjct: 215 EAAKLTNADQKYKHLR 230
>gi|219363585|ref|NP_001137055.1| uncharacterized protein LOC100217227 [Zea mays]
gi|194698178|gb|ACF83173.1| unknown [Zea mays]
Length = 239
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 157/196 (80%), Gaps = 10/196 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF+MIDAFA+SQGI + T + KA G+G V PVLLA
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALLGEGMVDGVPVLLA 94
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNGLKSV+
Sbjct: 95 KPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVIY 154
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+FR GIGRP GQMDPKAF+LQKFN RERID+A++EGV++LK++ ++GLT
Sbjct: 155 HFRKNREFCRLRIGIGRPAGQMDPKAFVLQKFNRTGRERIDSAVREGVDILKMVAARGLT 214
Query: 187 ESARHFNTIQKYKHIR 202
E+A+ N QKYKH+R
Sbjct: 215 EAAKLTNADQKYKHLR 230
>gi|357112247|ref|XP_003557921.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 234
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/195 (66%), Positives = 156/195 (80%), Gaps = 10/195 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF MIDAFA+SQGIS+ T H KA FG+G V PVLLA
Sbjct: 33 QPWLFVGLGNPGEKYQSTRHNVGFAMIDAFAQSQGISLTTHHFKALFGEGMVDGVPVLLA 92
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTY+NLSGES G LAAYYKLPLNRVLV +DD LPCGVLRL+ GG+G HNGLKSV+
Sbjct: 93 KPQTYINLSGESAGALAAYYKLPLNRVLVAYDDTDLPCGVLRLQPKGGYGRHNGLKSVIY 152
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+FR GIGRPPGQMDP+AF+LQKFN RERID+A++EG ++LK+++ +G+T
Sbjct: 153 HFRKNREFGRLRIGIGRPPGQMDPRAFVLQKFNKTGRERIDSAMKEGADILKMVVIRGVT 212
Query: 187 ESARHFNTIQKYKHI 201
E+ R N QKYKH+
Sbjct: 213 EAGRLSNADQKYKHL 227
>gi|125543850|gb|EAY89989.1| hypothetical protein OsI_11554 [Oryza sativa Indica Group]
gi|125586236|gb|EAZ26900.1| hypothetical protein OsJ_10828 [Oryza sativa Japonica Group]
Length = 274
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 137/216 (63%), Positives = 160/216 (74%), Gaps = 24/216 (11%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 74
V PWLFVGLGNPG+KY+ TRHNVGF+MID FA+SQGIS+ KA FG+G V PVL
Sbjct: 57 VINPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVL 116
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG---- 130
LAKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG+G HNG
Sbjct: 117 LAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNGSVDF 176
Query: 131 ----------LKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
+KS++ +FR GIGRPPGQMDPKAF+LQKFN RERID+A+
Sbjct: 177 IIMCFNELIRVKSLIYHFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGRERIDSAI 236
Query: 171 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 206
+EGVE+LKL+++KGLTE+AR N QKYKH+ +M
Sbjct: 237 EEGVEILKLVVTKGLTEAARSSNVDQKYKHLTTHDM 272
>gi|357166670|ref|XP_003580792.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 239
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/195 (67%), Positives = 157/195 (80%), Gaps = 10/195 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF+MIDAFA+SQGI + T H KA FG+G V PVLLA
Sbjct: 37 QPWLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHHFKALFGEGMVDGVPVLLA 96
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTY+NLSGES LAAYYKLPL+RVLV +DD LPCGVLRL+ GG G HNGLKSV+
Sbjct: 97 KPQTYINLSGESAAALAAYYKLPLHRVLVAYDDTDLPCGVLRLQPKGGSGRHNGLKSVIY 156
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+FR GIGRPPGQMDPKAF+LQKFN ARERID+ ++EGV++LK++++KGLT
Sbjct: 157 HFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTARERIDSGIKEGVDILKMVVTKGLT 216
Query: 187 ESARHFNTIQKYKHI 201
E+AR N QKYKH+
Sbjct: 217 EAARVSNVNQKYKHL 231
>gi|242040937|ref|XP_002467863.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
gi|241921717|gb|EER94861.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
Length = 241
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/202 (63%), Positives = 156/202 (77%), Gaps = 12/202 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF+MIDAFA+SQGI + T + KA FG+G V PVL+A
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLIA 94
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNG+ ++ N
Sbjct: 95 KPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGFGRHNGILNLCN 154
Query: 137 ------------NFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
+ GIGRPPGQMDPKAF+LQKFN RERID+A++EGV +LK++ ++G
Sbjct: 155 STLPCVDFWNFFSLVGIGRPPGQMDPKAFVLQKFNRTGRERIDSAIREGVNILKMVATRG 214
Query: 185 LTESARHFNTIQKYKHIRLQNM 206
LTE+AR N QKYK +R ++
Sbjct: 215 LTEAARLSNADQKYKLLRSHDI 236
>gi|357518883|ref|XP_003629730.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
gi|355523752|gb|AET04206.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
Length = 403
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/136 (78%), Positives = 117/136 (86%), Gaps = 1/136 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
+++ +R FCT RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGI+M+TVHCKA
Sbjct: 1 MLSTLTKRSFCTVAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIAMDTVHCKA 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 61 IFGKGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLND 120
Query: 122 NGGHGGHNGLKSVMNN 137
GGHG H G K++ NN
Sbjct: 121 KGGHGSHKG-KTMANN 135
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 10/88 (11%)
Query: 131 LKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 180
LKSV+ NFR GIG+PPGQMDPKAFLLQKFN AR+RID ALQEGV+ LKLL
Sbjct: 250 LKSVIYNFRDNSEFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKLL 309
Query: 181 LSKGLTESARHFNTIQKYKHIRLQNMPA 208
L GL SA+ FN QKYKH+++Q +P
Sbjct: 310 LFIGLEVSAKRFNKEQKYKHLKVQTLPV 337
>gi|449455782|ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
gi|449519774|ref|XP_004166909.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
Length = 249
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 142/196 (72%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG+KY GTRHNVGFEMID+ A++QGI MNT+ KA G G +G+ P+LLAK
Sbjct: 54 PWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLAK 113
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN GES GPLAA+Y++PL VL+ +D+M LP GVLRL+ GHG HNG+KSVM +
Sbjct: 114 PQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMGH 173
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD KAFLLQKF+++ R++ID AL++GVE ++ L G ++
Sbjct: 174 LDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFSQ 233
Query: 188 SARHFNTIQKYKHIRL 203
FN QKYK+ ++
Sbjct: 234 RVNRFNLSQKYKYHKV 249
>gi|162461597|ref|NP_001104963.1| chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic precursor [Zea mays]
gi|75312019|sp|Q9M5P4.1|CRS2_MAIZE RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 2; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 2; Flags: Precursor
gi|6752919|gb|AAF27939.1|AF225708_1 CRS2 [Zea mays]
Length = 256
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 142/196 (72%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG+KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVL+ K
Sbjct: 61 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVK 120
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+ +
Sbjct: 121 PQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 180
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 240
Query: 188 SARHFNTIQKYKHIRL 203
S FN +QKYK R+
Sbjct: 241 STERFNLVQKYKFHRV 256
>gi|356513117|ref|XP_003525260.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Glycine max]
Length = 259
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 140/195 (71%), Gaps = 10/195 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
A PWL VGLGNPG KY TRHNVGFEM+D AE++GISM TV K+ FG+GF+GD PV+L
Sbjct: 63 ASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVIL 122
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKPQTYMN SGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG+KSV+
Sbjct: 123 AKPQTYMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVI 182
Query: 136 NNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
N+F+ GIGRPPG+MDP AF+L+ F RE ++ LQ+G+E +++LL +G
Sbjct: 183 NHFKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLEGF 242
Query: 186 TESARHFNTIQKYKH 200
+SA N+ +K +
Sbjct: 243 DKSATFVNSAKKIEQ 257
>gi|194698704|gb|ACF83436.1| unknown [Zea mays]
gi|413947310|gb|AFW79959.1| chloroplast RNA splicing2 [Zea mays]
Length = 256
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 142/196 (72%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG+KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVL+ K
Sbjct: 61 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVK 120
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+ +
Sbjct: 121 PQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 180
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 240
Query: 188 SARHFNTIQKYKHIRL 203
S FN +QKYK R+
Sbjct: 241 STERFNLVQKYKFHRV 256
>gi|242056565|ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
gi|241929403|gb|EES02548.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
Length = 256
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 139/192 (72%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG+KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVL+ K
Sbjct: 61 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAGEEGITMNTIQSKSLLGIGSIGEVPVLVVK 120
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+YMN SGE+ GPLAAYY++PL +L+ +DDM LP GVLRL+ GGHG HNGL++V+ N
Sbjct: 121 PQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDMSLPNGVLRLQKKGGHGRHNGLQNVIEN 180
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MDP+AFLLQKF++ R +ID +L++GV+ ++ L+ KG
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDASLEQGVDAVRTLVLKGFCG 240
Query: 188 SARHFNTIQKYK 199
S FN +QKYK
Sbjct: 241 STERFNLVQKYK 252
>gi|115434354|ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|75288538|sp|Q5ZCL8.1|CRS2_ORYSJ RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=CRS2-like protein;
AltName: Full=Chloroplastic RNA splicing factor 2;
Flags: Precursor
gi|53792159|dbj|BAD52792.1| putative peptidyl-tRNA hydrolase [Oryza sativa Japonica Group]
gi|113531466|dbj|BAF03849.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|215687059|dbj|BAG90905.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617682|gb|EEE53814.1| hypothetical protein OsJ_00257 [Oryza sativa Japonica Group]
Length = 259
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 138/192 (71%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVLL K
Sbjct: 64 PWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVK 123
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+Y+N SGE+ GPLAAYY++PL +LV +D+M LP GVLRL+ GGHG HNGL++VM
Sbjct: 124 PQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMEC 183
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MD +AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 184 LDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSG 243
Query: 188 SARHFNTIQKYK 199
S FN +QKYK
Sbjct: 244 SIERFNLVQKYK 255
>gi|255631022|gb|ACU15875.1| unknown [Glycine max]
Length = 228
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 139/195 (71%), Gaps = 10/195 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
A PWL VGLGNPG KY TRHNVGFEM+D AE++GISM TV K+ FG+GF+GD PV+L
Sbjct: 27 ASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVIL 86
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKPQTYMN SGES G + +YYK+PL +VL DD+ LP LRL GGHGGHNG+KSV+
Sbjct: 87 AKPQTYMNSSGESVGAIVSYYKIPLKQVLEIFDDLDLPFAKLRLLPKGGHGGHNGVKSVI 146
Query: 136 NNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
N+F+ GIGRPPG+MDP AF+L+ F RE ++ LQ+G+E +++LL +G
Sbjct: 147 NHFKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLEGF 206
Query: 186 TESARHFNTIQKYKH 200
+SA N+ +K +
Sbjct: 207 DKSATFVNSAKKIEQ 221
>gi|224079329|ref|XP_002305823.1| predicted protein [Populus trichocarpa]
gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 138/193 (71%), Gaps = 10/193 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHNVGFEMID A+++G+ MNT+ KA G G +G+ P+LLAK
Sbjct: 49 PWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAK 108
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ YMN SGES GPLAA+YK+PL +L+ +D+M LP G+LR++ GGHG HNG+KSVM++
Sbjct: 109 PQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDH 168
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD KAFLLQKF+ RE+ID +L++GVE ++ L+ G T
Sbjct: 169 LDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTN 228
Query: 188 SARHFNTIQKYKH 200
FN QKYK+
Sbjct: 229 KITRFNLGQKYKY 241
>gi|40889731|pdb|1RYM|A Chain A, Structure Of The Group Ii Intron Splicing Factor Crs2
Length = 212
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 141/196 (71%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG+KY GTRHNVGFEM+D A +GI+MNT K+ G G +G+ PVL+ K
Sbjct: 17 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTEQSKSLLGIGSIGEVPVLVVK 76
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+ +
Sbjct: 77 PQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 136
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 137 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 196
Query: 188 SARHFNTIQKYKHIRL 203
S FN +QKYK R+
Sbjct: 197 STERFNLVQKYKFHRV 212
>gi|116783352|gb|ABK22906.1| unknown [Picea sitchensis]
Length = 246
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 144/193 (74%), Gaps = 10/193 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL +GLGNPG KY+GTRHNVGFEMID+ A+++GIS+N + K+ G+G++ + PVLLAK
Sbjct: 51 PWLLIGLGNPGKKYEGTRHNVGFEMIDSIAKAEGISLNAIQSKSLIGKGYICNTPVLLAK 110
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTY+NL+GES G LA YY++P +L+ D M LP G+LR++ GGHG HNG+KSV+N+
Sbjct: 111 PQTYINLTGESVGSLAVYYRIPFQHILLMFDMMELPSGILRIQAKGGHGLHNGVKSVINH 170
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIG PPG MD KA++LQ+F+ + RE+++ +LQEGV+ +LL+S+G ++
Sbjct: 171 LKGNRNFPRLCIGIGNPPGSMDSKAYVLQQFSTMEREKMNISLQEGVDATRLLISEGFSQ 230
Query: 188 SARHFNTIQKYKH 200
S FN QKYK+
Sbjct: 231 SIDGFNKRQKYKY 243
>gi|218187457|gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indica Group]
Length = 259
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 138/192 (71%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVLL K
Sbjct: 64 PWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVK 123
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+Y+N SGE+ GPLAAYY++PL +LV +D+M LP GVLRL+ GGHG HNGL++VM
Sbjct: 124 PQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMEC 183
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MD +AFLLQKF++ + +IDTAL++GV+ ++ L+ KG +
Sbjct: 184 LDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEEQLQIDTALEQGVDAVRTLVLKGFSG 243
Query: 188 SARHFNTIQKYK 199
S FN +QKYK
Sbjct: 244 SIERFNLVQKYK 255
>gi|357508117|ref|XP_003624347.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
gi|355499362|gb|AES80565.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
Length = 251
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 142/196 (72%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG+KY GTRHNVGFE+ID+ ++S+GI MNT+ KA G G +G+ PVLLAK
Sbjct: 56 PWLVVGLGNPGNKYHGTRHNVGFEIIDSLSQSEGILMNTIQSKALIGIGSIGEVPVLLAK 115
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SGES GPLAAYY++PL +LV +D+ LP GVL+L+ GGHG HNGLK+V+ +
Sbjct: 116 PQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPNGVLKLQPKGGHGHHNGLKNVIGH 175
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD +AFLLQKF+++ R+++D +L++GV+ +K L+ G
Sbjct: 176 LDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVKTLVLNGFNH 235
Query: 188 SARHFNTIQKYKHIRL 203
FN QKYK+ ++
Sbjct: 236 HVNRFNLGQKYKYNKV 251
>gi|297805938|ref|XP_002870853.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316689|gb|EFH47112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 135/192 (70%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHN+GFEMID A + ISMNT+ KA G G VG+ P+LL K
Sbjct: 46 PWLIVGLGNPGFKYYGTRHNIGFEMIDHIARATEISMNTIQSKALVGIGSVGEVPILLVK 105
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ YMN SGES GPLAAYY++PL +L+ +DDMGLP GVLRL+ GGH HNGLK+V +
Sbjct: 106 PQAYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLPNGVLRLQPKGGHSQHNGLKNVTEH 165
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD KAFLLQKF+ + R++ID L++GVE +K L+ +G ++
Sbjct: 166 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQIDAGLEQGVEGVKTLVEEGFSD 225
Query: 188 SARHFNTIQKYK 199
S FN QKYK
Sbjct: 226 SISRFNLGQKYK 237
>gi|357520293|ref|XP_003630435.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
gi|355524457|gb|AET04911.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
Length = 243
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 141/196 (71%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG+KY TRHNVGFE+ID+ ++SQGI MNT+ KA G G +G+ PVLLAK
Sbjct: 48 PWLVVGLGNPGNKYHATRHNVGFEIIDSLSQSQGILMNTIQSKALIGIGSIGEVPVLLAK 107
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SGES GPLAAYY++PL +LV +D+ LP GVL+L+ GGHG HNGLK+V+ +
Sbjct: 108 PQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPSGVLKLQPKGGHGHHNGLKNVIGH 167
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD +AFLLQKF+++ R+++D +L++GV+ ++ L+ G
Sbjct: 168 LDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVRTLVLNGFNH 227
Query: 188 SARHFNTIQKYKHIRL 203
FN QKYK+ R+
Sbjct: 228 HVNRFNLGQKYKYNRV 243
>gi|357127248|ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like [Brachypodium distachyon]
Length = 369
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 139/196 (70%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG KY GTRHNVGFEM+D A+ +GI MNT+ K+ G G +G+ PVLL K
Sbjct: 174 PWLIAGLGNPGGKYHGTRHNVGFEMVDRIAQVEGIVMNTIQSKSLLGVGSIGEVPVLLVK 233
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+YMN GE+ GPLAAYY++PL +LV +D+M LP GVLRL+ GGHG HNGL++V+ +
Sbjct: 234 PQSYMNYCGEAIGPLAAYYQVPLRHILVIYDEMSLPNGVLRLQRKGGHGRHNGLQNVIEH 293
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MD +AFLLQKF++ R +ID AL++GV+ ++ L+ KG +
Sbjct: 294 LDGCREFPRLSIGIGSPPGKMDTRAFLLQKFSSEERVQIDIALEQGVDAVRTLVLKGFSG 353
Query: 188 SARHFNTIQKYKHIRL 203
S FN +QKYK R+
Sbjct: 354 SIERFNLVQKYKFNRV 369
>gi|388501072|gb|AFK38602.1| unknown [Lotus japonicus]
Length = 247
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 141/196 (71%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHNVGFE+ID+ + ++GI MNT+ KA G G +GD PVLLAK
Sbjct: 52 PWLVVGLGNPGSKYHGTRHNVGFEIIDSLSRAEGILMNTIQSKALIGLGSIGDVPVLLAK 111
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SGE+ GPLAAYY++PL +++ +D+ LP GVLRL+ GGHG HNG K+VM +
Sbjct: 112 PQTYMNFSGEAVGPLAAYYRIPLRHIILVYDETSLPNGVLRLQPKGGHGHHNGSKNVMGH 171
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD +AFLLQKF+++ R++ID +L++GV+ ++ L+ G ++
Sbjct: 172 LDGSRDFPRLAIGIGNPPGSMDSRAFLLQKFSSVERQQIDDSLEQGVQAIRTLVLHGFSQ 231
Query: 188 SARHFNTIQKYKHIRL 203
FN QKYK+ ++
Sbjct: 232 HVSRFNLGQKYKYHKV 247
>gi|357521083|ref|XP_003630830.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
gi|355524852|gb|AET05306.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
Length = 258
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 140/194 (72%), Gaps = 10/194 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
PWL VGLGNPG K+ GTRHNVGFEM+DA AE++GISM++V KA FG+G++GD PV+LA
Sbjct: 63 EPWLIVGLGNPGKKFNGTRHNVGFEMVDAIAEAEGISMSSVSFKALFGKGYIGDVPVILA 122
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MNLSGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG+KSV+N
Sbjct: 123 KPQTFMNLSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVIN 182
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRPPG+MDP AF+L+ F +E ++ LQ+G+E ++++L G
Sbjct: 183 HLKGNSGFPRLRIGIGRPPGKMDPVAFVLRPFTKQEKEELNFTLQDGLEAVRIILLDGFD 242
Query: 187 ESARHFNTIQKYKH 200
+ A N+ +K +
Sbjct: 243 KGATFVNSAKKMEQ 256
>gi|294462383|gb|ADE76740.1| unknown [Picea sitchensis]
Length = 256
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 144/199 (72%), Gaps = 13/199 (6%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWL VGLGNPG Y GTRHNVGFEMID A+++GIS++ + C+A FG+G + +PV+LA
Sbjct: 60 KPWLLVGLGNPGKLYNGTRHNVGFEMIDTIAQAEGISVSRIQCRALFGKGHINGSPVMLA 119
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SGES GPL AYYK+PLN+VL+ DDM LP LRL GGHGGHNG+KSV++
Sbjct: 120 KPQTFMNASGESVGPLVAYYKIPLNQVLLIFDDMDLPFAKLRLLPKGGHGGHNGMKSVID 179
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+F+ GIGRPPG+MDP +++L+ F +E +D LQ+G++ +++L+++G
Sbjct: 180 HFKGNREFPRLRIGIGRPPGKMDPISYVLRPFTKGEQEELDLTLQDGLDAIRILINQGFD 239
Query: 187 ESARHFNTIQKYKHIRLQN 205
+SA N QK R+QN
Sbjct: 240 KSATIVNRAQKA---RIQN 255
>gi|270047872|pdb|1RYB|A Chain A, Crystal Structure Of The Chloroplast Group Ii Intron
Splicing Factor Crs2
Length = 205
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 137/189 (72%), Gaps = 10/189 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG+KY GTRHNVGFEM+D A +GI+MNT+ K+ G G +G+ PVL+ K
Sbjct: 17 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVK 76
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+ +
Sbjct: 77 PQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 136
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 137 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 196
Query: 188 SARHFNTIQ 196
S FN +Q
Sbjct: 197 STERFNLVQ 205
>gi|40889732|pdb|1RYN|A Chain A, Structure Of The Chloroplast Group Ii Intron Splicing
Factor Crs2
Length = 202
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 137/190 (72%), Gaps = 10/190 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG+KY GTRHNVGFEM+D A +GI+MNT K+ G G +G+ PVL+ K
Sbjct: 5 PWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTNQFKSLLGTGSIGEVPVLVVK 64
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+ +
Sbjct: 65 PQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 124
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 125 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 184
Query: 188 SARHFNTIQK 197
S FN +QK
Sbjct: 185 STERFNLVQK 194
>gi|297844788|ref|XP_002890275.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336117|gb|EFH66534.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 142/194 (73%), Gaps = 10/194 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY+GTRHNVGFEM+DA A ++GISMNTV+ KA FG+G +G+ P+++AK
Sbjct: 87 PWLIVGLGNPGKKYQGTRHNVGFEMVDALANAEGISMNTVNFKALFGKGVIGNIPIMMAK 146
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 147 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 206
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G+ +
Sbjct: 207 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDYTFQTGIEAIRILLLEGINK 266
Query: 188 SARHFNTIQKYKHI 201
SA NT + + +
Sbjct: 267 SATFVNTRKSMEQL 280
>gi|30685853|ref|NP_173279.2| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
gi|134035412|sp|Q8GW64.2|PTHC_ARATH RecName: Full=Peptidyl-tRNA hydrolase, chloroplastic; AltName:
Full=C-PTH; Flags: Precursor
gi|332191593|gb|AEE29714.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 288
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 142/194 (73%), Gaps = 10/194 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY+GTRHNVGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 154 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G +
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNK 273
Query: 188 SARHFNTIQKYKHI 201
SA NT + + +
Sbjct: 274 SATFVNTRKSMEQL 287
>gi|225455878|ref|XP_002275254.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Vitis
vinifera]
Length = 205
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%), Gaps = 10/195 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
+PWL VGLGNPG KY GTRHNVGFEM+DA AE++GIS+++V K+ FG+GF+G+ PV+L
Sbjct: 8 VKPWLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVML 67
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKPQT+MN+SGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG++SV+
Sbjct: 68 AKPQTFMNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVI 127
Query: 136 NNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
++F+ GIGRPPG+MD F+L F+ RE +D Q GVE +++LL +G
Sbjct: 128 DHFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGF 187
Query: 186 TESARHFNTIQKYKH 200
+SA NT + +
Sbjct: 188 NKSASFVNTAKSLEQ 202
>gi|42573527|ref|NP_974860.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
gi|332006907|gb|AED94290.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 250
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 134/192 (69%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHN+GFEMID A + ISMNT+ KA G G VG+ P+LL K
Sbjct: 55 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVK 114
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ YMN SGES GPLAAYY++PL +L+ +DDMGL GVLRL+ GGH HNGLK+V +
Sbjct: 115 PQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEH 174
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G ++
Sbjct: 175 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSD 234
Query: 188 SARHFNTIQKYK 199
S FN QKYK
Sbjct: 235 SISRFNLGQKYK 246
>gi|15240875|ref|NP_198645.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
gi|75309164|sp|Q9FKN4.1|CRS2A_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic; AltName: Full=CRS2-like protein
A; AltName: Full=Chloroplastic RNA splicing factor 2-A;
Flags: Precursor
gi|9758861|dbj|BAB09443.1| unnamed protein product [Arabidopsis thaliana]
gi|90962962|gb|ABE02405.1| At5g38290 [Arabidopsis thaliana]
gi|332006908|gb|AED94291.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 246
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 134/192 (69%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHN+GFEMID A + ISMNT+ KA G G VG+ P+LL K
Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVK 110
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ YMN SGES GPLAAYY++PL +L+ +DDMGL GVLRL+ GGH HNGLK+V +
Sbjct: 111 PQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEH 170
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G ++
Sbjct: 171 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSD 230
Query: 188 SARHFNTIQKYK 199
S FN QKYK
Sbjct: 231 SISRFNLGQKYK 242
>gi|297811751|ref|XP_002873759.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319596|gb|EFH50018.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 134/192 (69%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG+KY GTRHNVGFEMID A +G+ MNT+ KA G G + D P+LL K
Sbjct: 44 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLVK 103
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SGES G LA++Y++PL +L+ +D+M LP GVLRL+ GG G HNG+KSVM +
Sbjct: 104 PQTYMNFSGESVGSLASHYRVPLRHILMLYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 163
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG+PPG MD KAFLLQKF+ + R++ID AL++G E +K L+ G +
Sbjct: 164 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFNQ 223
Query: 188 SARHFNTIQKYK 199
FN +QKYK
Sbjct: 224 GISRFNLVQKYK 235
>gi|297734182|emb|CBI15429.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%), Gaps = 10/195 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
+PWL VGLGNPG KY GTRHNVGFEM+DA AE++GIS+++V K+ FG+GF+G+ PV+L
Sbjct: 110 VKPWLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVML 169
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKPQT+MN+SGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG++SV+
Sbjct: 170 AKPQTFMNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVI 229
Query: 136 NNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
++F+ GIGRPPG+MD F+L F+ RE +D Q GVE +++LL +G
Sbjct: 230 DHFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGF 289
Query: 186 TESARHFNTIQKYKH 200
+SA NT + +
Sbjct: 290 NKSASFVNTAKSLEQ 304
>gi|26453108|dbj|BAC43630.1| unknown protein [Arabidopsis thaliana]
gi|28950849|gb|AAO63348.1| At1g18440 [Arabidopsis thaliana]
Length = 288
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 142/194 (73%), Gaps = 10/194 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY+GTRHNVGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQT+M+LSGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 154 PQTFMDLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G +
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNK 273
Query: 188 SARHFNTIQKYKHI 201
SA NT + + +
Sbjct: 274 SATFVNTRKSMEQL 287
>gi|26451849|dbj|BAC43017.1| putative CRS2 [Arabidopsis thaliana]
Length = 246
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 134/192 (69%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHN+GFEMID A + ISMNT+ KA G G VG+ P+LL K
Sbjct: 51 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVK 110
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ YMN SGES GPLAAYY++PL +L+ +DD+GL GVLRL+ GGH HNGLK+V +
Sbjct: 111 PQGYMNFSGESVGPLAAYYQIPLRHILMIYDDLGLSNGVLRLQPKGGHSQHNGLKNVTEH 170
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G ++
Sbjct: 171 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSD 230
Query: 188 SARHFNTIQKYK 199
S FN QKYK
Sbjct: 231 SISRFNLGQKYK 242
>gi|218188893|gb|EEC71320.1| hypothetical protein OsI_03361 [Oryza sativa Indica Group]
Length = 250
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 141/195 (72%), Gaps = 10/195 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG Y+GTRHNVGFEMID AE++GIS++++ KA G+G +GDAP++LA
Sbjct: 54 KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLA 113
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP LRL GGHGGHNG++S++N
Sbjct: 114 KPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIIN 173
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRPPG+MDP F+L+ FN +E +D A G+E ++++ +G
Sbjct: 174 HLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFN 233
Query: 187 ESARHFNTIQKYKHI 201
+SA + NT Q + +
Sbjct: 234 KSATYVNTAQSSEML 248
>gi|242058417|ref|XP_002458354.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
gi|241930329|gb|EES03474.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
Length = 247
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 142/195 (72%), Gaps = 10/195 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG Y+GTRHNVGFEMID AE++GIS++++ KA G+G +GDAP++LA
Sbjct: 51 KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLA 110
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SGES G L +Y+K+PLN+V+V +DD+ LP LRL GGHGGHNG++S++N
Sbjct: 111 KPQTFMNASGESVGQLVSYFKIPLNQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVN 170
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRPPG+MDP F+L+ FN +E +D AL G+E +++++ G
Sbjct: 171 HLKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQEELDFALHRGLEAVRIMVLGGFN 230
Query: 187 ESARHFNTIQKYKHI 201
+SA + NT Q + +
Sbjct: 231 KSATYVNTAQSSEML 245
>gi|15237280|ref|NP_197118.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|145334495|ref|NP_001078593.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|75311128|sp|Q9LF14.1|CRS2B_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic; AltName: Full=CRS2-like protein
B; AltName: Full=Chloroplastic RNA splicing factor 2-B;
Flags: Precursor
gi|9755824|emb|CAC01855.1| CRS2-like protein [Arabidopsis thaliana]
gi|38016015|gb|AAR07514.1| At5g16140 [Arabidopsis thaliana]
gi|51968726|dbj|BAD43055.1| CRS2-like protein [Arabidopsis thaliana]
gi|332004868|gb|AED92251.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|332004869|gb|AED92252.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
Length = 240
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 135/192 (70%), Gaps = 10/192 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG+KY GTRHNVGFEMID A +G+ MNT+ KA G G + D P+LLAK
Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SGES G LA++Y++PL +L+ +D+M LP GVLRL+ GG G HNG+KSVM +
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG+PPG MD KAFLLQKF+ + +++I+ AL++G E +K L+ G +
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQ 224
Query: 188 SARHFNTIQKYK 199
FN +QKYK
Sbjct: 225 GISRFNLVQKYK 236
>gi|115439337|ref|NP_001043948.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|75285812|sp|Q5N9Q7.1|PTHM_ORYSJ RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; Flags: Precursor
gi|56785144|dbj|BAD81799.1| Peptidyl-tRNA hydrolase-like [Oryza sativa Japonica Group]
gi|113533479|dbj|BAF05862.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|215704712|dbj|BAG94340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619093|gb|EEE55225.1| hypothetical protein OsJ_03102 [Oryza sativa Japonica Group]
Length = 250
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 141/195 (72%), Gaps = 10/195 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG Y+GTRHNVGFEMID AE++GIS++++ KA G+G +GDAP++LA
Sbjct: 54 KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLA 113
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP LRL GGHGGHNG++S++N
Sbjct: 114 KPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIIN 173
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRPPG+MDP F+L+ FN +E +D A G+E ++++ +G
Sbjct: 174 HLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFN 233
Query: 187 ESARHFNTIQKYKHI 201
+SA + NT Q + +
Sbjct: 234 KSATYVNTAQSSEML 248
>gi|388522905|gb|AFK49514.1| unknown [Medicago truncatula]
Length = 258
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 138/194 (71%), Gaps = 10/194 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
PWL VGLGNPG K+ GTRHNVGFEM+D AE++GISM++V KA FG+G++GD PV+LA
Sbjct: 63 EPWLIVGLGNPGKKFNGTRHNVGFEMVDTIAEAEGISMSSVSFKALFGKGYIGDVPVILA 122
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MNLSGES G + +YYK+PL +VLV D + LP LRL GGHGGHNG+KSV+N
Sbjct: 123 KPQTFMNLSGESVGAIVSYYKIPLKQVLVIFDGLDLPFAKLRLLPKGGHGGHNGMKSVIN 182
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRPPG+MDP AF+L+ F +E ++ LQ+G+E ++++L G
Sbjct: 183 HLKGNSGFPRLRIGIGRPPGKMDPVAFVLRPFTKQEKEELNFTLQDGLEAVRIILLDGFD 242
Query: 187 ESARHFNTIQKYKH 200
+ A N+ +K +
Sbjct: 243 KGATFVNSAKKMEQ 256
>gi|58743494|gb|AAW81735.1| Putative Putative Pepidyl-tRNA hydrolase family protein [Brassica
oleracea]
Length = 291
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 140/193 (72%), Gaps = 10/193 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG KY+GTRHNVGFEM+DA AE++GISMNTV+ KA FG+G +G+ P++LAKP
Sbjct: 98 WLIVGLGNPGKKYQGTRHNVGFEMVDALAEAEGISMNTVNFKALFGKGVIGNIPIMLAKP 157
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 158 QTFMNASGESVGQIVSFYKIPLKQVLVIYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRL 217
Query: 139 R----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+ GIGRPPG+MD ++L++FN +E +D Q G+E ++++L +G +S
Sbjct: 218 KGSRDFPRLRIGIGRPPGKMDTANYVLRQFNKQEQEELDYTFQTGLEAIRIMLLEGFNKS 277
Query: 189 ARHFNTIQKYKHI 201
A NT + + +
Sbjct: 278 ATFVNTQKSMQQL 290
>gi|225452074|ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic [Vitis vinifera]
gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 134/193 (69%), Gaps = 10/193 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG+KY GTRHNVGFEMID ++ +GI +NT+ KA G G +G+ P+LLAK
Sbjct: 51 PWLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAK 110
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQ YMN SGES GPLAAYY++PL +LV +D+M LP GVLRL GGHG HNGLK+VM +
Sbjct: 111 PQAYMNFSGESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGH 170
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD KA+LLQKF+ R++ID A ++G+ ++ L+ G
Sbjct: 171 LDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNH 230
Query: 188 SARHFNTIQKYKH 200
S FN QKYK+
Sbjct: 231 STTRFNLGQKYKY 243
>gi|226531744|ref|NP_001148279.1| peptidyl-tRNA hydrolase [Zea mays]
gi|194697668|gb|ACF82918.1| unknown [Zea mays]
gi|195617118|gb|ACG30389.1| peptidyl-tRNA hydrolase [Zea mays]
gi|414880876|tpg|DAA58007.1| TPA: peptidyl-tRNA hydrolase [Zea mays]
Length = 247
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 142/195 (72%), Gaps = 10/195 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG Y+GTRHNVGFEMID AE++GIS++++ KA G+G +GDA ++LA
Sbjct: 51 KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLA 110
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SGES G L +Y+K+PL++V+V +DD+ LP LRL GGHGGHNG++S++N
Sbjct: 111 KPQTFMNASGESVGQLVSYFKIPLSQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVN 170
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRPPG+MDP F+L+ FN ++ +D AL G+E +++++ +G
Sbjct: 171 HLKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQQELDFALHRGLEAVRIMVPEGFN 230
Query: 187 ESARHFNTIQKYKHI 201
+SA + NT Q + +
Sbjct: 231 KSATYVNTAQSSEML 245
>gi|358248120|ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycine max]
gi|255645504|gb|ACU23247.1| unknown [Glycine max]
Length = 244
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 137/196 (69%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL +GLGNPG+KY GTRHNVGFE+ID+ + ++GI MNT+ KA G G +G+ P+LLAK
Sbjct: 49 PWLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAK 108
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SGES GPLAAYY++PL +L+ D+ LP GVLRL+ GGHG HNGLK+VM +
Sbjct: 109 PQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGH 168
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG PPG MD +A+LLQKF+ R++ID +L++ V ++ ++ G +
Sbjct: 169 LDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQ 228
Query: 188 SARHFNTIQKYKHIRL 203
FN QKYK+ ++
Sbjct: 229 HVNRFNLGQKYKYHKV 244
>gi|255541798|ref|XP_002511963.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223549143|gb|EEF50632.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 272
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 140/197 (71%), Gaps = 10/197 (5%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
+V +PWL VGLGNPG KY+ TRHNVGFEM+DA A+S+GI +++V KA G+G++G+ PV
Sbjct: 74 SVKKPWLIVGLGNPGKKYQSTRHNVGFEMVDAVADSEGIPLSSVSFKALLGKGYIGNVPV 133
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKPQT+MN SGES G + +YYK+PL +VL+ +DD+ LP LRL GGHGGHNG++S
Sbjct: 134 MLAKPQTFMNASGESVGAIVSYYKIPLKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMRS 193
Query: 134 VMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
V+++F+ GIGRPPG+MD F+L+ F+ E +D Q+G+E +++LL +
Sbjct: 194 VIDHFKGSRDFPRLRIGIGRPPGKMDSANFVLRPFSRQEHEELDFTFQQGLEAIRILLLE 253
Query: 184 GLTESARHFNTIQKYKH 200
G +SA N+ + +
Sbjct: 254 GFNKSATFVNSAKSMEQ 270
>gi|224118918|ref|XP_002317938.1| predicted protein [Populus trichocarpa]
gi|222858611|gb|EEE96158.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 137/194 (70%), Gaps = 10/194 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY TRHNVGF+M+DA A+++GIS++ V KA FG+GF+G+ PV+ AK
Sbjct: 77 PWLIVGLGNPGKKYHSTRHNVGFQMVDALADAEGISISGVSFKALFGKGFIGNVPVMFAK 136
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQT+MN SGES G + +YYK+PL +VL+ +DD+ LP LRL GGHGGHNG+KSV+N+
Sbjct: 137 PQTFMNASGESVGAIVSYYKIPLKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVINH 196
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
F+ GIGRPPG+MD F+L+ F E +D Q+G+E +++LL +GL +
Sbjct: 197 FKGNRDFPRLRIGIGRPPGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNK 256
Query: 188 SARHFNTIQKYKHI 201
SA N+ + + +
Sbjct: 257 SATFVNSTKSMEQL 270
>gi|255551384|ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 253
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 137/201 (68%), Gaps = 18/201 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNV--------GFEMIDAFAESQGISMNTVHCKATFGQGFVG 69
PWL VGLGNPG+KY GTRHNV GFEMID A+++ ++MNT+ KA G G +
Sbjct: 50 PWLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIK 109
Query: 70 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
+ P+LL KPQ YMN SGES GPLAA+Y++PL +L+ +D+M LP GV+RL+ GGHG HN
Sbjct: 110 EVPILLVKPQAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHN 169
Query: 130 GLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
G+KSVM + GIG PPG MD +AFLLQKF++ RE+ID AL +G++ ++
Sbjct: 170 GVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRT 229
Query: 180 LLSKGLTESARHFNTIQKYKH 200
L+ G ++ FN QKYK+
Sbjct: 230 LVLSGFNQNITRFNLGQKYKY 250
>gi|357136028|ref|XP_003569608.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 249
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 137/195 (70%), Gaps = 10/195 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG Y+ TRHNVGFEMID AE++GIS++++ KA G+G +GD P++LA
Sbjct: 53 KPWLFVGLGNPGKIYQSTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGRGRIGDVPIMLA 112
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP LRL GGHGGHNG++S++N
Sbjct: 113 KPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIIN 172
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRPPG+MDP F+L+ F +E +D G+E ++++ +G
Sbjct: 173 HLKQTHDFPRLRIGIGRPPGKMDPANFVLRPFTKKEQEELDFTFHRGLEAVRIMTVEGFN 232
Query: 187 ESARHFNTIQKYKHI 201
+SA NT+Q + +
Sbjct: 233 KSATFVNTVQSSEML 247
>gi|449486844|ref|XP_004157420.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cucumis
sativus]
Length = 273
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 135/193 (69%), Gaps = 10/193 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG KY TRHNVGFEM+DA AE++GIS++ V KA G+GF+GD PV+LAKP
Sbjct: 80 WLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISNVSFKALIGKGFIGDVPVMLAKP 139
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGES G + +YYK+PL +VLV DD+ LP LR+ GGHGGHNG++S++++F
Sbjct: 140 QTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDHF 199
Query: 139 R----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+ GIGRPPG+MD F+L+ FN RE ++ LQ G + +++LL +G +S
Sbjct: 200 KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGEDAIRILLLEGFNKS 259
Query: 189 ARHFNTIQKYKHI 201
A NT + + I
Sbjct: 260 ATFVNTNKSLEQI 272
>gi|242088699|ref|XP_002440182.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
gi|241945467|gb|EES18612.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
Length = 262
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 135/193 (69%), Gaps = 10/193 (5%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 71
C +PWLFVGLGNPG YKGTRHNVGFEMIDA AE++GIS+++ KA G+G +GD
Sbjct: 61 CAGAQKPWLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKAIVGKGLIGDV 120
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
PV+LAKPQT+MN SGES G L +Y+K+PLN+++V +DD+ LP LRL GGHGGHNG+
Sbjct: 121 PVMLAKPQTFMNASGESVGQLVSYFKIPLNQLVVIYDDLDLPFAKLRLLPKGGHGGHNGM 180
Query: 132 KSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
+S++++ + GIGRPP + +F+LQ F +E ++ Q G++ +++++
Sbjct: 181 RSIIDHLKQSRNFARLRIGIGRPPEEQGAISFVLQSFTVQEKEELEVVFQRGLQAVRIMV 240
Query: 182 SKGLTESARHFNT 194
+G +SA+ NT
Sbjct: 241 QEGFNKSAQFVNT 253
>gi|449439389|ref|XP_004137468.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cucumis
sativus]
Length = 274
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 135/193 (69%), Gaps = 10/193 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG KY TRHNVGFEM+DA AE++GIS++ V KA G+GF+GD PV+LAKP
Sbjct: 81 WLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISNVSFKALIGKGFIGDVPVMLAKP 140
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGES G + +YYK+PL +VLV DD+ LP LR+ GGHGGHNG++S++++F
Sbjct: 141 QTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDHF 200
Query: 139 R----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+ GIGRPPG+MD F+L+ FN RE ++ LQ G + +++LL +G +S
Sbjct: 201 KGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGEDAIRILLLEGFNKS 260
Query: 189 ARHFNTIQKYKHI 201
A NT + + I
Sbjct: 261 ATFVNTNKSLEQI 273
>gi|168050723|ref|XP_001777807.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670783|gb|EDQ57345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 136/196 (69%), Gaps = 10/196 (5%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
A+ PWL VGLGNPG K+ GTRHN+GFE+IDA AE++ I + T+ ++ G+GF+G PV
Sbjct: 52 ALGLPWLIVGLGNPGSKFVGTRHNIGFELIDAIAEAENIPLRTIQQRSLLGKGFIGPTPV 111
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
LLAKP TYMNLSGES GP++ YYK+P RVL +DD+ L +LR+ GGHGGHNG++S
Sbjct: 112 LLAKPHTYMNLSGESVGPISTYYKIPRERVLAIYDDLELEFAMLRILPRGGHGGHNGMRS 171
Query: 134 VMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
++ +F G+GRP MDP A++LQKFN R+ +D LQ GVE ++LL+++
Sbjct: 172 LIEHFGGKQDFPRLRFGVGRPECNMDPSAYVLQKFNPRERKELDEVLQRGVEGVRLLMTE 231
Query: 184 GLTESARHFNTIQKYK 199
GL ++ +N +K +
Sbjct: 232 GLQKTVTTWNLHRKSR 247
>gi|168038662|ref|XP_001771819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676950|gb|EDQ63427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 252
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 10/190 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG K++GTRHN+GF+MIDA AE++ I + + K+ G+G++G PVLLAK
Sbjct: 58 PWLIVGLGNPGIKFEGTRHNIGFDMIDAIAEAENIPLRMIQHKSLLGKGYIGTTPVLLAK 117
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMNLSGES GPL+AYYK+P RVL DD+ L L+L GGHGGHNG++S++++
Sbjct: 118 PQTYMNLSGESVGPLSAYYKIPRERVLAIFDDLDLQFATLKLLPKGGHGGHNGMRSLIDH 177
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
F GIGRP G M P A++LQKF++ E +D LQ GVE ++LL ++GL +
Sbjct: 178 FGGKQDFPRLRFGIGRPAGSMPPSAYVLQKFSSKEIEELDVVLQRGVEGVRLLTTQGLEK 237
Query: 188 SARHFNTIQK 197
+ +N K
Sbjct: 238 AVSTWNKKSK 247
>gi|413946361|gb|AFW79010.1| hypothetical protein ZEAMMB73_673090 [Zea mays]
Length = 256
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 10/194 (5%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 72
T +PWLFVGLGNPG YKGTRHNVGFEMIDA AE++GIS+++ KA G+G +GD P
Sbjct: 56 TGAQKPWLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKAIVGKGLIGDVP 115
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKPQT+MN SGES G L +Y+K+PLN+++V +DD+ LP LRL GGHGGHNG++
Sbjct: 116 VMLAKPQTFMNASGESVGQLVSYFKIPLNQLVVIYDDLDLPFAKLRLLPKGGHGGHNGMR 175
Query: 133 SVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
S++++ GIGRPP ++ F+L+ F +E ++ Q ++ +++++
Sbjct: 176 SIVDHLNQSRDFGRLRIGIGRPPEELGAINFVLRSFTKQEKEELEVTFQRSLQAVRIMVR 235
Query: 183 KGLTESARHFNTIQ 196
+G +SA+ NT Q
Sbjct: 236 EGFNKSAQFVNTPQ 249
>gi|356524077|ref|XP_003530659.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Glycine
max]
Length = 184
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 115/154 (74%), Gaps = 10/154 (6%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
A PWL VGLGNPG KY TRHNVGFEM+D AE++GISM TV KA FG+GF+GD PV+L
Sbjct: 25 ASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKALFGKGFIGDVPVIL 84
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKPQT+MNLSGES G + +YYK+P+ +VLV DD+ LP L+L GGHGGHNG+KSV+
Sbjct: 85 AKPQTFMNLSGESVGTIVSYYKIPVKQVLVIVDDLDLPFAKLQLLPKGGHGGHNGMKSVI 144
Query: 136 NNFR----------GIGRPPGQMDPKAFLLQKFN 159
N+F+ GIGRPPG+MDP AF+L F
Sbjct: 145 NHFKGNTGFPRLRIGIGRPPGKMDPVAFVLHTFT 178
>gi|326501542|dbj|BAK02560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 133/191 (69%), Gaps = 10/191 (5%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
A +PWLFVGLGNPG YKGTRHNVGFEMIDA AE++GIS++T K+ G+G +GD PV
Sbjct: 52 AAPKPWLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVPV 111
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKPQT+MN SGES G L +Y+K+PLN+V++ +DD+ LP LRL GGHGGHNG++S
Sbjct: 112 MLAKPQTFMNASGESVGQLVSYFKIPLNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRS 171
Query: 134 VMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
V+++ + GIGRP G M F+L+ F+ +E +D+ G+ ++++L +
Sbjct: 172 VIHHLKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQEELDSTFLRGLRAVRIMLLE 231
Query: 184 GLTESARHFNT 194
G +SA NT
Sbjct: 232 GFNKSATFVNT 242
>gi|326514970|dbj|BAJ99846.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 133/191 (69%), Gaps = 10/191 (5%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
A +PWLFVGLGNPG YKGTRHNVGFEMIDA AE++GIS++T K+ G+G +GD PV
Sbjct: 26 AAPKPWLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVPV 85
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKPQT+MN SGES G L +Y+K+PLN+V++ +DD+ LP LRL GGHGGHNG++S
Sbjct: 86 MLAKPQTFMNASGESVGQLVSYFKIPLNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRS 145
Query: 134 VMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
V+++ + GIGRP G M F+L+ F+ +E +D+ G+ ++++L +
Sbjct: 146 VIHHLKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQEELDSTFLRGLRAVRIMLLE 205
Query: 184 GLTESARHFNT 194
G +SA NT
Sbjct: 206 GFNKSATFVNT 216
>gi|125553210|gb|EAY98919.1| hypothetical protein OsI_20874 [Oryza sativa Indica Group]
Length = 235
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 131/190 (68%), Gaps = 10/190 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWL +GLGNPG YKGTRHNVGFEMIDA AE++GIS+++ K+ G+G +GD PV+LA
Sbjct: 39 KPWLLIGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKSMVGKGLIGDVPVMLA 98
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTYMN SGES L +Y+K+PL++VLV +DD+ +P LRL GGHGGHNG++S++N
Sbjct: 99 KPQTYMNASGESVAQLVSYFKIPLSQVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSIIN 158
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ + GIGRP G++D F+L+ F +E ++ + ++ ++++L +G
Sbjct: 159 HLKQSRDFPRLRIGIGRPTGKLDAIGFVLRSFTKEEQEELNLTINRSLQAVRIMLLEGFN 218
Query: 187 ESARHFNTIQ 196
+ A NT Q
Sbjct: 219 KGATFVNTPQ 228
>gi|357132680|ref|XP_003567957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 256
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 133/188 (70%), Gaps = 10/188 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG YKGTRHNVGFEMIDA AE++GIS++ KA G+G +GD PV+LA
Sbjct: 60 KPWLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISISNRQFKAMVGKGLIGDVPVMLA 119
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SGES G L +Y+K+PLN+V+V +DD+ LP L L GGHGGHNG++SV++
Sbjct: 120 KPQTFMNASGESVGMLVSYFKIPLNQVVVIYDDLDLPFAKLHLLPKGGHGGHNGMRSVIH 179
Query: 137 NFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+F+ GIGRP G + F+L+ F+ +E +++ +G++ ++++L +G
Sbjct: 180 HFKNTRDFPRLRIGIGRPTGMLGAINFVLRSFSQQEQEELNSTFCKGLQAVRIMLLEGFN 239
Query: 187 ESARHFNT 194
+SA NT
Sbjct: 240 KSATFVNT 247
>gi|302757433|ref|XP_002962140.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
gi|300170799|gb|EFJ37400.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
Length = 177
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 10/177 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG K+ GTRHNVGFE ID A + I +NT+ CKA G+G + PVLL KP
Sbjct: 1 WMIVGLGNPGSKFVGTRHNVGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKP 60
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSG++ PLA YY++ + +LV HDDM L +++ GG GGHNG+++++ F
Sbjct: 61 QTYMNLSGDAVSPLALYYRVKPDNILVIHDDMNLDVAAMKMVPKGGPGGHNGMRNIIERF 120
Query: 139 R----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG MDPKA++LQKF + ID + G + ++L++S G
Sbjct: 121 KDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|302763245|ref|XP_002965044.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
gi|300167277|gb|EFJ33882.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
Length = 177
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 116/177 (65%), Gaps = 10/177 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG K+ GTRHNVGFE ID A + I +NT+ CKA G+G + PVLL KP
Sbjct: 1 WMIVGLGNPGSKFVGTRHNVGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKP 60
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSG++ PLA YY++ + +LV HDDM L +++ GG GGHNG+++++ F
Sbjct: 61 QTYMNLSGDAVSPLALYYRVKPDNILVIHDDMDLDVAAMKMVPKGGPGGHNGMRNIIERF 120
Query: 139 R----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG MDPKA++LQKF + ID + G + ++L++S G
Sbjct: 121 KDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|414866787|tpg|DAA45344.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 151
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/116 (75%), Positives = 97/116 (83%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF+MIDAFA+SQGI + T + KA FG+G V PVLLA
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLLA 94
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
KPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNGL
Sbjct: 95 KPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLS 150
>gi|414866789|tpg|DAA45346.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 152
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/114 (76%), Positives = 96/114 (84%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF+MIDAFA+SQGI + T + KA FG+G V PVLLA
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLLA 94
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
KPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNG
Sbjct: 95 KPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNG 148
>gi|115453001|ref|NP_001050101.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|122247022|sp|Q10LI6.1|CRS2L_ORYSJ RecName: Full=CRS2-like protein, chloroplastic; AltName:
Full=Chloroplastic RNA splicing factor 2-like protein;
Flags: Precursor
gi|108708119|gb|ABF95914.1| Peptidyl-tRNA hydrolase, putative, expressed [Oryza sativa Japonica
Group]
gi|113548572|dbj|BAF12015.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|215707163|dbj|BAG93623.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 186
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 95/116 (81%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 74
V PWLFVGLGNPG+KY+ TRHNVGF+MID FA+SQGIS+ KA FG+G V PVL
Sbjct: 57 VINPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVL 116
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
LAKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG+G HNG
Sbjct: 117 LAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>gi|6714302|gb|AAF25998.1|AC013354_17 F15H18.8 [Arabidopsis thaliana]
Length = 777
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 112/166 (67%), Gaps = 27/166 (16%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY+GTRHNVGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQT+MNLSGES +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 154 PQTFMNLSGESV-----------------YDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 196
Query: 138 FR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 173
+ GIGRPPG+MD F+L++FN +E +D Q G
Sbjct: 197 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTG 242
>gi|356527496|ref|XP_003532345.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like, partial [Glycine max]
Length = 204
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 126/198 (63%), Gaps = 19/198 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVLL 75
PWL VGLGNPG KY GTR NVGFE+ID + ++GI +NT+ KA G + + P+LL
Sbjct: 8 PWLIVGLGNPGYKYHGTRDNVGFEIIDILSRAEGIQINTIQSKALIGISVLLEIEVPILL 67
Query: 76 AKPQTYMNLSGESTG---PLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
AKPQTYMN SGES PLAAYY+LPL +L+ + + +LRL+ GGHG HNGLK
Sbjct: 68 AKPQTYMNFSGESVSWAMPLAAYYQLPLRHILL----VCISYVILRLQPKGGHGHHNGLK 123
Query: 133 SVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+VM + GIG PPG MD +A+LLQKF+ R++ID +L++ V ++ ++
Sbjct: 124 NVMGHLDGCSDFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVGAVRTVVL 183
Query: 183 KGLTESARHFNTIQKYKH 200
G + FN QKYK+
Sbjct: 184 NGFDQHVNRFNLGQKYKY 201
>gi|255634128|gb|ACU17427.1| unknown [Glycine max]
Length = 179
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 98/128 (76%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL +GLGNPG+KY GTRHNVGFE+ID+ + ++GI MNT+ KA G G +G+ P+LLAK
Sbjct: 49 PWLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAK 108
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SGES GPLAAYY++PL +L+ D+ LP GVLRL+ NGGHG HNGLK+VM +
Sbjct: 109 PQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPNGGHGHHNGLKNVMGH 168
Query: 138 FRGIGRPP 145
G P
Sbjct: 169 LDGCSAFP 176
>gi|374854021|dbj|BAL56914.1| aminoacyl-tRNA hydrolase [uncultured prokaryote]
Length = 235
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 9/186 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
P L VGLGNPG +Y RHNVGF +++ FA++ ++ + +A +G + V+LAK
Sbjct: 38 PVLIVGLGNPGPEYARNRHNVGFRVVEVFAQAHQMAFRRILHQALIAEGRLAGQRVILAK 97
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQT+MNLSG S PL +YY++PLNR+LV +DDM LP G +RLR G GGHNG+KS++
Sbjct: 98 PQTFMNLSGRSVRPLVSYYRVPLNRLLVVYDDMDLPLGAIRLRPRGSPGGHNGMKSIVQA 157
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG M+P ++LQ F E ++ L + ++ + +GL +
Sbjct: 158 LGTMEFPRLRIGIGRPPGHMNPADYVLQDFRPDEEEILEGVLHRATQAIRTFIEEGLEAA 217
Query: 189 ARHFNT 194
FN
Sbjct: 218 MNRFNA 223
>gi|224079331|ref|XP_002305824.1| predicted protein [Populus trichocarpa]
gi|222848788|gb|EEE86335.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 89/113 (78%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHNVGFEMID A+++G+ MNT+ KA G G +G+ P+LLAK
Sbjct: 49 PWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAK 108
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
PQ YMN SGES GPLAA+YK+PL +L+ +D+M LP G+LR++ GGHG HNG
Sbjct: 109 PQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNG 161
>gi|223974357|gb|ACN31366.1| unknown [Zea mays]
Length = 166
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 92/114 (80%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG Y+GTRHNVGFEMID AE++GIS++++ KA G+G +GDA ++LA
Sbjct: 51 KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLA 110
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
KPQT+MN SGES G L +Y+K+PL++V+V +DD+ LP LRL GGHGGHNG
Sbjct: 111 KPQTFMNASGESVGQLVSYFKIPLSQVVVMYDDLDLPFAKLRLLPKGGHGGHNG 164
>gi|72160821|ref|YP_288478.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
gi|119391031|sp|Q47SW2.1|PTH_THEFY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71914553|gb|AAZ54455.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
Length = 213
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 9/179 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG KY G RHNVGF ++D A +G A + VGDAPV+LAKP
Sbjct: 35 WLVVGLGNPGPKYAGNRHNVGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKP 94
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+YMNLSG L+A+YK+P++R++V HD++ +P L+L+ GG GHNGL+S+ +
Sbjct: 95 ASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITASL 154
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+MD +F+LQ F+ R+ +D + + ++ +++ GL ++
Sbjct: 155 GSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEKA 213
>gi|320161445|ref|YP_004174669.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
gi|319995298|dbj|BAJ64069.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
Length = 208
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 107/186 (57%), Gaps = 9/186 (4%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+P+L VGLGNPG +Y+ RHN GF ID A++ I+ V KA G ++LA
Sbjct: 16 KPFLIVGLGNPGREYRENRHNAGFMFIDRLAKALLITPGRVQSKAIIATGQYAGKRLILA 75
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTYMNLSG+S LA +YK+P ++LV HDD+ LP G LRLR GG G G+ S++
Sbjct: 76 KPQTYMNLSGQSVKGLAQFYKIPPEQILVAHDDLDLPLGTLRLRPGGGSAGQKGVSSIIQ 135
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIGRPPGQMDP A++LQ F+ +E +D + V+ + G+
Sbjct: 136 QLGTSQFCRLRIGIGRPPGQMDPAAYVLQDFSEKEKEILDEVMDRAVKAALRFVEAGIQT 195
Query: 188 SARHFN 193
+ FN
Sbjct: 196 AMNEFN 201
>gi|384246371|gb|EIE19861.1| peptidyl-tRNA hydrolase [Coccomyxa subellipsoidea C-169]
Length = 198
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 113/186 (60%), Gaps = 18/186 (9%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +Y TRHNVGF ++D A G S++ + A G+G VLLAKP
Sbjct: 9 WLVVGLGNPGKQYADTRHNVGFMLVDELARQLGASLDKLQHSAALGRGRFCGKRVLLAKP 68
Query: 79 QTYMNLSGESTG-----PLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
T+MN SGES PLA ++PL RVLV +DD+ L G +RLR GGHGGHNG++S
Sbjct: 69 MTFMNNSGESANLKRLFPLA---QVPLERVLVVYDDLDLDSGAVRLRAKGGHGGHNGMRS 125
Query: 134 VMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
+ +F GIGRPPG +++LQ F R+ I A+QEG+++++ +L+
Sbjct: 126 ITQHFSGSKDFPRLRIGIGRPPGSQQVVSYVLQGFGRKERDEIYVAIQEGIDIVRAVLTL 185
Query: 184 GLTESA 189
G+ ++
Sbjct: 186 GMEKAV 191
>gi|291298816|ref|YP_003510094.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
gi|290568036|gb|ADD41001.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN---TVHCKATFGQGFVGDAPVL 74
P+L VGLGNPG KY G RHNVGF + D AE G SM V + G+ +G V+
Sbjct: 5 PYLIVGLGNPGPKYAGNRHNVGFMVADLLAERVGGSMKRAAKVRAEVCQGRLSIGGPQVI 64
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KP TYMN+SG++ PLA ++K+P R++V HD++ LP GV+RL+ GG GHNGLKS
Sbjct: 65 LVKPLTYMNVSGQAVAPLAVFFKVPAERIIVVHDELDLPYGVVRLKAGGGENGHNGLKST 124
Query: 135 MNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
GIGRPPG++DP AF+L+ F+ ++ + + + + ++ GL
Sbjct: 125 SQALGDKGYVRARFGIGRPPGRIDPAAFVLRDFSPAEKKELPLFVDLTADAVSEVVESGL 184
Query: 186 TESARHFNTIQKY 198
++ F+ + Y
Sbjct: 185 VKAQNKFHALSLY 197
>gi|325110026|ref|YP_004271094.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
gi|324970294|gb|ADY61072.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
Length = 192
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+GTRHNVGFE++ A S T +A + V LL PQ
Sbjct: 3 VIVGLGNPGGKYEGTRHNVGFEVLYELARKWQASGVTRAHEAEIAEVHVAGEKTLLVAPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S G L +YK+ L +LV DD+ LPCG LRLR +G GG G++ ++ +
Sbjct: 63 TFMNLSGRSVGSLVKFYKVDLEDLLVISDDLNLPCGQLRLRASGSSGGQKGIRDIIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+MD F+L++F A RE +D +++ V+ ++L L +G+T +
Sbjct: 123 TEDFPRLRVGIGRPPGRMDVSTFVLKRFLAEERETMDLTVRDAVDAVELWLREGVTAAMN 182
Query: 191 HFNT 194
NT
Sbjct: 183 KVNT 186
>gi|117929151|ref|YP_873702.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
gi|117649614|gb|ABK53716.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
Length = 196
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 11/191 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG Y RHNVGF ++D AE G+ + G + P +LAK
Sbjct: 5 PWLVVGLGNPGPAYAKNRHNVGFMVVDLLAERAGMRFTVHRTRTQLANGRLAGQPAMLAK 64
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P +YMN SG L Y+++P R++V HD++ LP GVLR++ GG GHNGL+S+
Sbjct: 65 PLSYMNQSGGPVAGLLHYFRIPRERLIVVHDELDLPFGVLRVKRGGGDAGHNGLRSITAA 124
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL--T 186
R GIGRPP +DP ++L+ F+A R + L+E +V++ LLS GL T
Sbjct: 125 LRGADYLRVRFGIGRPPPHLDPAEYVLRDFSAAERAELGVHLEEAADVVESLLSVGLAAT 184
Query: 187 ESARHFNTIQK 197
++A H Q+
Sbjct: 185 QNAVHGRGRQR 195
>gi|90657669|gb|ABD96967.1| hypothetical protein [Cleome spinosa]
Length = 257
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 120/209 (57%), Gaps = 23/209 (11%)
Query: 18 PWLFVGLGNPGDKYKGTRHNV----GFEMIDAFAESQGISMNTVHCK-ATFGQGFVGDAP 72
PWL VGLGNPG+K+ GTRHNV + FA S + K A F G + + P
Sbjct: 49 PWLIVGLGNPGNKFHGTRHNVRNNRPLLLNSGFASSTCWVLYQQCLKFAAFSTGAIEEVP 108
Query: 73 VLLAKPQTYMNLSGE-STGPLAAYYKLP-------LNRVLVFHDDMGLPCGVLRLRHNGG 124
VLLAKPQTYMN SG S L++ ++ + + +D+M LP GVL+L GG
Sbjct: 109 VLLAKPQTYMNFSGWISRCTLSSAFETHFAGKPHLVPHCSLIYDEMSLPNGVLKLIPKGG 168
Query: 125 HGGHNGLKSVMNNFRG----------IGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 174
+G HNGLKSV+ N G IG+PPG MD KAFLLQKF+ + R+++D L++G
Sbjct: 169 YGHHNGLKSVIGNLNGRRHFPRLCIGIGKPPGMMDLKAFLLQKFSPVERKQMDEGLEQGA 228
Query: 175 EVLKLLLSKGLTESARHFNTIQKYKHIRL 203
E +K L+ G E FN +QKYK R+
Sbjct: 229 EAVKTLVLNGFNEGISRFNLVQKYKFHRV 257
>gi|291522022|emb|CBK80315.1| peptidyl-tRNA hydrolase [Coprococcus catus GD/7]
Length = 190
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNP +Y+GTRHNVGFE ID A I + KA +G G++ V+LAKPQ
Sbjct: 3 LIVGLGNPTKQYEGTRHNVGFETIDRIAAENQIRVEEKKHKALYGSGYIEGEKVILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSGES L+ YYK+P ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 63 TFMNLSGESVRELSDYYKIPAENIIVIYDDISLDVGQLRIREKGSAGGHNGIKNIILHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G P D ++L +++A R+ ID A +E E +K+++ + +
Sbjct: 123 TEVFPRIKVGVGEKPKGWDLADYVLGRYSAEDRKIIDEAQKEAAEAVKMMVMDDVRGAMN 182
Query: 191 HFNTIQK 197
+NT +K
Sbjct: 183 RYNTKKK 189
>gi|288921323|ref|ZP_06415605.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
gi|288347297|gb|EFC81592.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
Length = 195
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 9/186 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG Y G RHNVGF ++D AE G + + +A Q + P +LA+
Sbjct: 9 PWLVVGLGNPGPAYAGNRHNVGFMVVDLLAERTGARLRSHRSRADVDQVRLAGRPAVLAR 68
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+T+MN+SG L A+YK+ + V+V HD++ +P G +RL+ GG GHNGL+S+ ++
Sbjct: 69 PRTFMNVSGPPAAALRAFYKVDVAHVIVVHDELDIPFGAIRLKRGGGDNGHNGLRSITSS 128
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+MDP F+L+ F+ + R+ + + + ++ LL + L+
Sbjct: 129 LGSRDYLRVRVGIGRPPGRMDPADFVLRDFSTVERKELPLLVDSAADAVESLLQEELSAV 188
Query: 189 ARHFNT 194
F+
Sbjct: 189 QNRFHA 194
>gi|366163463|ref|ZP_09463218.1| peptidyl-tRNA hydrolase [Acetivibrio cellulolyticus CD2]
Length = 190
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ +GLGNPG KY TRHNVGF+ ID ++ I++ V KA G G + A V+L KP
Sbjct: 5 FVVIGLGNPGTKYDNTRHNVGFDTIDRLSKKHNIAVTKVKHKAVIGDGTIEGARVILVKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YK+P+ +++ +DD+ LP G LR+R G G HNG++SV+
Sbjct: 65 QTFMNLSGESVREIMEWYKIPVENIIIVYDDIDLPVGKLRVRPKGSAGTHNGMRSVIYQI 124
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ G+ +PP D F+L KF+ R+ ++ A++ V ++ ++ G+ +
Sbjct: 125 QSDDFPRIRIGVDKPPQGWDLANFVLSKFSPDERKNVEEAIENAVGAVETIIKSGVDNAM 184
Query: 190 RHFNT 194
FNT
Sbjct: 185 NRFNT 189
>gi|159487239|ref|XP_001701641.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280860|gb|EDP06616.1| predicted protein [Chlamydomonas reinhardtii]
Length = 172
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 98/163 (60%), Gaps = 10/163 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG Y TRHN+GF++ID A + GI + A G+G + VLL KP
Sbjct: 2 WMIVGLGNPGSNYDDTRHNIGFKVIDELAAAAGIDCRKLEKSAAVGKGELQGKQVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MN SGES LA +Y++P RVLV DD+ P +RLR GGHGGHNGL+S+++
Sbjct: 62 VTFMNNSGESVAALAKFYRVPPGRVLVVADDLDQPTAQVRLRQRGGHGGHNGLRSIIDRM 121
Query: 139 R----------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GIGRP G + +++LQ FN R IDTA+Q
Sbjct: 122 GGTQDFPRIKIGIGRPSGPIPIASYVLQPFNKAERPEIDTAVQ 164
>gi|158312638|ref|YP_001505146.1| peptidyl-tRNA hydrolase [Frankia sp. EAN1pec]
gi|158108043|gb|ABW10240.1| Aminoacyl-tRNA hydrolase [Frankia sp. EAN1pec]
Length = 195
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG Y G RHNVGF ++D AE G + + +A Q + V+LA+
Sbjct: 9 PWLVVGLGNPGASYAGNRHNVGFMVVDLLAERTGARLRSHRSRAEIDQVRLAGRSVVLAR 68
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+T+MN+SG + A+YK+ ++RV+V HD++ +P +RL+ GG GHNGL+S+ ++
Sbjct: 69 PRTFMNVSGPPVAAVRAFYKIDVSRVIVVHDELDIPFDAIRLKRGGGDNGHNGLRSITSS 128
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+MDP F+L+ F+ + R+ + + + ++ LL + L +
Sbjct: 129 LGSRDYLRVRVGIGRPPGRMDPADFVLRDFSPVERKALPLIVDNAADAVESLLQEELAAA 188
Query: 189 ARHFNT 194
F+
Sbjct: 189 QNRFHA 194
>gi|389571465|ref|ZP_10161560.1| peptidyl-tRNA hydrolase [Bacillus sp. M 2-6]
gi|388428865|gb|EIL86655.1| peptidyl-tRNA hydrolase [Bacillus sp. M 2-6]
Length = 188
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
FVGLGNPG +Y+ TRHNVGF ID ++ I +N +G GFV VLL KP T
Sbjct: 4 FVGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQYGTGFVSGQKVLLVKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGE PL YY++PL + V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 YMNLSGECVRPLMDYYEIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHLGS 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ FR GIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 124 PEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDISSAIQASVEACEAALTKPFLEVMND 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|157690835|ref|YP_001485297.1| peptidyl-tRNA hydrolase [Bacillus pumilus SAFR-032]
gi|167011990|sp|A8F920.1|PTH_BACP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157679593|gb|ABV60737.1| stage V sporulation aminoacyl-tRNA hydrolase [Bacillus pumilus
SAFR-032]
Length = 188
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
FVGLGNPG +Y+ TRHNVGF ID ++ I +N FG GFV VLL KP T
Sbjct: 4 FVGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGE PL YY +PL + V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 YMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHLGS 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ FR GIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 124 PEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVMND 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|302836311|ref|XP_002949716.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
gi|300265075|gb|EFJ49268.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
Length = 223
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 95/163 (58%), Gaps = 10/163 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG Y TRHNVGF +ID A GI + A G+G V VLL KP
Sbjct: 59 WLIVGLGNPGSNYDETRHNVGFMVIDELARQAGIDCRKLEKSAAVGKGEVHGKQVLLVKP 118
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MN SGES LA +Y++P +RVLV DD+ P +R+R GGHGGHNGL+S+++
Sbjct: 119 VTFMNNSGESVAALAKFYRVPPSRVLVVSDDLDQPVAQVRIRAKGGHGGHNGLRSIIDRM 178
Query: 139 ----------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GIGRP G M ++LQ F+ R ID A+Q
Sbjct: 179 GGAQDFPRIKVGIGRPSGPMPIATYVLQPFSKAERPDIDLAVQ 221
>gi|194017971|ref|ZP_03056578.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
gi|194010308|gb|EDW19883.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
Length = 188
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
F+GLGNPG +Y+ TRHNVGF ID ++ I +N FG GFV VLL KP T
Sbjct: 4 FIGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFNGLFGTGFVSGQKVLLVKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGE PL YY +PL + V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 YMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHLGS 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ FR GIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 124 PEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVMND 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|219849378|ref|YP_002463811.1| peptidyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
gi|254783860|sp|B8G3X3.1|PTH_CHLAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219543637|gb|ACL25375.1| Aminoacyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
Length = 188
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 10/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG++Y TRHN+GF ++ AE G++ K+ +G + V L KP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSG++ L +YK+ P +LV +DD+ LP LRLR G G HNG++S++
Sbjct: 62 QTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQ 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIG+PPGQMD ++L +F + L + +++++S+GLT +
Sbjct: 122 LGTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTAA 181
Query: 189 ARHFNTI 195
+N +
Sbjct: 182 MNRYNPL 188
>gi|423090602|ref|ZP_17078891.1| aminoacyl-tRNA hydrolase [Clostridium difficile 70-100-2010]
gi|357556306|gb|EHJ37921.1| aminoacyl-tRNA hydrolase [Clostridium difficile 70-100-2010]
Length = 186
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHNVGF++ID A+ IS+ + KA G+G VG VLL KP
Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+ N
Sbjct: 62 QTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITNCL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+ +P D F+L +F + I+ AL++ + + ++ + + S
Sbjct: 122 GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|126701126|ref|YP_001090023.1| peptidyl-tRNA hydrolase [Clostridium difficile 630]
gi|254977127|ref|ZP_05273599.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-66c26]
gi|255094456|ref|ZP_05323934.1| peptidyl-tRNA hydrolase [Clostridium difficile CIP 107932]
gi|255102712|ref|ZP_05331689.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-63q42]
gi|255308533|ref|ZP_05352704.1| peptidyl-tRNA hydrolase [Clostridium difficile ATCC 43255]
gi|255316207|ref|ZP_05357790.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-76w55]
gi|255518869|ref|ZP_05386545.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-97b34]
gi|255652048|ref|ZP_05398950.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-37x79]
gi|260685022|ref|YP_003216307.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260688680|ref|YP_003219814.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
gi|306521785|ref|ZP_07408132.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-32g58]
gi|384362696|ref|YP_006200548.1| peptidyl-tRNA hydrolase [Clostridium difficile BI1]
gi|119390926|sp|Q181A2.1|PTH_CLOD6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115252563|emb|CAJ70406.1| Peptidyl-tRNA hydrolase (PTH) [Clostridium difficile 630]
gi|260211185|emb|CBA66658.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260214697|emb|CBE07348.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
Length = 186
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHNVGF++ID A+ IS+ + KA G+G VG VLL KP
Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+
Sbjct: 62 QTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N+F G+ +P D F+L +F + I+ AL++ + + ++ + + S
Sbjct: 122 GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDMSM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|407979090|ref|ZP_11159912.1| peptidyl-tRNA hydrolase [Bacillus sp. HYC-10]
gi|407414306|gb|EKF35959.1| peptidyl-tRNA hydrolase [Bacillus sp. HYC-10]
Length = 188
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
FVGLGNPG +Y+ TRHNVGF ID ++ I +N +G GFV VLL KP T
Sbjct: 4 FVGLGNPGREYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQYGTGFVSGQKVLLVKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGE PL YY +PL + V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 YMNLSGECVRPLMDYYDIPLENLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHLGS 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ FR GIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 124 PEFDRFRIGIGRPQNGMKVVDYVLGRFSDEEQPDISSAIQASVEACEAALTKPFLEVMND 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|402299310|ref|ZP_10818932.1| peptidyl-tRNA hydrolase [Bacillus alcalophilus ATCC 27647]
gi|401725514|gb|EJS98792.1| peptidyl-tRNA hydrolase [Bacillus alcalophilus ATCC 27647]
Length = 185
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG+KY GTRHN+GF++ID+ A++ GI +N K +G G V V L KP
Sbjct: 3 LIVGLGNPGEKYAGTRHNIGFDIIDSCAKTLGIELNQAKFKGIYGTGIVNGEKVYLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES PL Y+++PL ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TYMNLSGESVRPLMDYFQIPLEDLVVIYDDLDLPAGKIRLRKKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R G+ RP ++L K++ R+ I+ ++++ ++ S E
Sbjct: 123 TQEFNRIRVGVDRPKNGEPIVHYVLGKYHPDERQAINESIEQATGAVEAWTSASFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 KFN 185
>gi|374711150|ref|ZP_09715584.1| peptidyl-tRNA hydrolase [Sporolactobacillus inulinus CASD]
Length = 189
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GFE+ID +E + I + A FG+G +GD VLL KP
Sbjct: 3 VIVGLGNPGSEYAHTRHNIGFEVIDYLSEQESIRLTKNKFNALFGKGKIGDTDVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SGE+ GPL ++KL +LV DDM LP G +RLR G GGHNG+KSV+ +
Sbjct: 63 TYMNASGEAVGPLLHFFKLDTADLLVIQDDMDLPIGKIRLRQKGSAGGHNGIKSVIQHVG 122
Query: 139 --------RGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P + ++LQ F R ID A++ +K L++ ++
Sbjct: 123 TQEFARIKVGIGHPQHTREAVVRYVLQGFQGDDRAAIDAAIERSTSAVKAWLTQPFSQVM 182
Query: 190 RHFNT 194
+N+
Sbjct: 183 NMYNS 187
>gi|358463544|ref|ZP_09173579.1| Peptidyl-tRNA hydrolase [Frankia sp. CN3]
gi|357070066|gb|EHI79848.1| Peptidyl-tRNA hydrolase [Frankia sp. CN3]
Length = 195
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 110/186 (59%), Gaps = 9/186 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +Y TRHN G+ ++DA AE G + + +A Q +G V+LA+
Sbjct: 9 WLVVGLGNPGAEYAATRHNAGYLVVDALAERHGARLRSHKARADADQIRLGGEAVVLART 68
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+TYMN+SG L A++K+ R++V HD++ +P G +RL+ GG GHNGL+S+ ++
Sbjct: 69 RTYMNVSGPPVASLRAFFKVDPARLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSSL 128
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPPG+MDP F+L+ F R+ + + + ++ L+ +GL +
Sbjct: 129 GTRDYLRVRFGIGRPPGRMDPADFVLRDFAVPERKEVPFLVDRAADAVEALVGEGLEPAQ 188
Query: 190 RHFNTI 195
F+T+
Sbjct: 189 NRFHTL 194
>gi|358061579|ref|ZP_09148233.1| peptidyl-tRNA hydrolase [Clostridium hathewayi WAL-18680]
gi|356700338|gb|EHI61844.1| peptidyl-tRNA hydrolase [Clostridium hathewayi WAL-18680]
Length = 191
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 111/185 (60%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNP +Y TRHNVGF +ID A+ GI ++ +A G+G + V+LAKP
Sbjct: 2 YIIVGLGNPTKEYDKTRHNVGFSVIDVLADRIGIDVSEKKHRALCGKGMLEGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YK+ + V++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTFMNLSGESVRAMVDFYKVSPDEVIIVYDDISLEPGQLRIRTKGSAGGHNGIKNIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P MD ++L +F+ +E +D A +E + + +++S+G+ +
Sbjct: 122 GTQEFPRIKVGVGEKPKYMDLADYVLSRFSKGEQELMDDAFREAADAVAMMISEGMDAAM 181
Query: 190 RHFNT 194
HFN
Sbjct: 182 NHFNA 186
>gi|415883946|ref|ZP_11545975.1| peptidyl-tRNA hydrolase [Bacillus methanolicus MGA3]
gi|387591741|gb|EIJ84058.1| peptidyl-tRNA hydrolase [Bacillus methanolicus MGA3]
Length = 186
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG Y TRHN+GFE+ID +ES I ++ K +G GFV ++L KP
Sbjct: 3 LIVGLGNPGKLYDKTRHNIGFEVIDRLSESLKIPLDQAKLKGIYGMGFVNGEKLILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES + YY + L +LV +DD+ LP G +RLR G GGHNG+KS +
Sbjct: 63 TYMNLSGESIRAVMDYYDIALEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSTIAHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++L +F +E +D +++ E + L K +
Sbjct: 123 SQEFNRIRVGIDRPPAGMSVVDYVLDRFREDEQEIMDDVIKKCAEACEAWLQKPFIQVMN 182
Query: 191 HFN 193
+N
Sbjct: 183 EYN 185
>gi|187777478|ref|ZP_02993951.1| hypothetical protein CLOSPO_01046 [Clostridium sporogenes ATCC
15579]
gi|187774406|gb|EDU38208.1| aminoacyl-tRNA hydrolase [Clostridium sporogenes ATCC 15579]
Length = 189
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G++YK TRHN+GF+ ID AE I +N K ++G+G +G+ V+L KP
Sbjct: 2 YLVVGLGNIGEEYKKTRHNIGFDAIDIIAEEYNIEINRQKFKGSYGEGRIGNEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKINKENIIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P G + ++L KF+ RE I+ L V+ ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDGNV--VNYVLGKFSKEQREIIEKTLAMSVKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|225028226|ref|ZP_03717418.1| hypothetical protein EUBHAL_02498 [Eubacterium hallii DSM 3353]
gi|224954538|gb|EEG35747.1| aminoacyl-tRNA hydrolase [Eubacterium hallii DSM 3353]
Length = 717
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 111/194 (57%), Gaps = 12/194 (6%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
R + VGLGNP D+YKGTRHNVG+ ID AE+ I++N KA G G +G + VLL
Sbjct: 521 RMKVIVGLGNPTDQYKGTRHNVGYMAIDRIAEANRININQHKFKAMVGSGIIGGSKVLLV 580
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP TYMNLSGES P+ +YKL L+ +LV +DD+ L G+LRLR G GGHNG+KS++
Sbjct: 581 KPLTYMNLSGESIRPIMDFYKLDLSDILVIYDDISLEPGMLRLRTKGSAGGHNGMKSIIK 640
Query: 137 NFRGIGRP-----------PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ G P PGQ D ++L F +E + AL + + +L
Sbjct: 641 HLGGDTFPRIRVGIGGEKHPGQ-DLADYVLGHFKDDEKELLSDALDKAEKAAELFAQDEF 699
Query: 186 TESARHFNTIQKYK 199
+E+ ++ +K +
Sbjct: 700 SEAMNKYSVGKKKR 713
>gi|331090627|ref|ZP_08339478.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401067|gb|EGG80662.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 190
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNP +Y+GTRHNVGF++IDA A+ I+M+ +A G+G + V+LAKP
Sbjct: 2 YIIVGLGNPTSQYEGTRHNVGFDVIDAIADKYNITMDIRKHRAFCGKGIIAGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L Y+K+ + ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESVRSLVDYFKIDEEQELIVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P Q D ++L F+ RE ++ Q V+ ++L+++ + +
Sbjct: 122 LGHSVFPRIKVGVGEKPKQYDLADYVLGHFSKAEREVMEDGYQNAVKAIELMVNDEIETA 181
Query: 189 ARHFNTIQK 197
FN K
Sbjct: 182 MNEFNKKTK 190
>gi|118444703|ref|YP_877115.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
gi|166199328|sp|A0PXL3.1|PTH_CLONN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118135159|gb|ABK62203.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
Length = 188
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHNVGF++ID +E I +N K +G G + + V+L KP
Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +YK+P V+V +DD+ L G +R+R G GGHNG+K+++ +F
Sbjct: 62 LTYMNLSGESIKEVTDFYKIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P Q D + +L KFN RE + + + + ++ KG E+
Sbjct: 122 GSDVFPRIKVGVGQPV-QRDLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAEAM 180
Query: 190 RHFN 193
FN
Sbjct: 181 NKFN 184
>gi|423080832|ref|ZP_17069449.1| aminoacyl-tRNA hydrolase [Clostridium difficile 002-P50-2011]
gi|423087233|ref|ZP_17075622.1| aminoacyl-tRNA hydrolase [Clostridium difficile 050-P50-2011]
gi|357545171|gb|EHJ27151.1| aminoacyl-tRNA hydrolase [Clostridium difficile 050-P50-2011]
gi|357552321|gb|EHJ34095.1| aminoacyl-tRNA hydrolase [Clostridium difficile 002-P50-2011]
Length = 186
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHNVGF++ID A+ IS+ + KA G+G VG VLL KP
Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+
Sbjct: 62 QTYMNLSGETLIDIYKYYKIDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N+F G+ +P D F+L +F + I+ AL++ + ++ + + S
Sbjct: 122 GSNDFPRVRVGVSKPEVGQDLADFVLSRFRKEESDNINEALEKAAYAIDSIIRENIDMSM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|311028984|ref|ZP_07707074.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
gi|311032272|ref|ZP_07710362.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
Length = 186
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+FVGLGNPG +Y+ TRHN+GF +ID A+ I + K FGQG + VLL KP
Sbjct: 3 VFVGLGNPGRQYEETRHNIGFMVIDELADKWNIPLTQSKFKGIFGQGTINGEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSGE PL +YKL + ++V +DD+ LP G LRLR G GGHNG+KS++ + +
Sbjct: 63 TYMNLSGECVRPLLDFYKLDVEDLVVIYDDLDLPAGKLRLRQKGSAGGHNGIKSLIQHLQ 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP ++L KF R ID ++++ E + LSK +
Sbjct: 123 TQNFNRIRMGIDRPKNGPSISDYVLGKFQTEERPAIDDSIKKAAEACEENLSKEFLQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 TFN 185
>gi|326202451|ref|ZP_08192320.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
gi|325987569|gb|EGD48396.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
Length = 189
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG K++ TRHNVGF+ ID + I ++ + KA +G+G + +L KP
Sbjct: 5 YLLVGLGNPGTKFENTRHNVGFDTIDYISAKYNIKLSRIGFKAVYGEGEIEGVRTILVKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YKLP+ R++V +DD+ L G +R+R G G HNG+KS++
Sbjct: 65 QTFMNLSGESVREIVDWYKLPVERLVVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIYQL 124
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GIGR P + D ++L KF+ R+ ID ++++ + + G ++
Sbjct: 125 QDDRFPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSVEKAAQAAIMTAKSGPEKAM 184
Query: 190 RHFN 193
+FN
Sbjct: 185 NNFN 188
>gi|255657459|ref|ZP_05402868.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-23m63]
gi|296449054|ref|ZP_06890844.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296879877|ref|ZP_06903850.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
gi|296262147|gb|EFH08952.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296429166|gb|EFH15040.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
Length = 186
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHNVGF++ID A+ IS+ + KA G+G VG VLL KP
Sbjct: 2 YVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+
Sbjct: 62 QTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKCL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N+F G+ +P D F+L +F + I+ AL++ + ++ + + S
Sbjct: 122 GSNDFPRVRVGVSKPEVGQDLADFVLSRFRKEESDNINEALEKAAYAIDSIIRENIDMSM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|86742630|ref|YP_483030.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
gi|119390941|sp|Q2J5Z1.1|PTH_FRASC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86569492|gb|ABD13301.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
Length = 197
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 15/190 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL GLGNPG Y G RHN GF ++D AE G + + +A + + A +LA+
Sbjct: 10 PWLVAGLGNPGPTYAGNRHNAGFMVVDLLAERTGSRLKSHRSRADVAETRLAGARAVLAR 69
Query: 78 PQTYMNLSGESTGPLAA---YYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
P ++MNLSG GP+AA +YK+ ++R++V HD++ +P G +RL+ GG GHNGL+S+
Sbjct: 70 PLSFMNLSG---GPVAAARSFYKVEVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSI 126
Query: 135 MNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+MDP F+L+ F + R + L+ + +++L++ GL
Sbjct: 127 SSALGTRDYLRVRVGIGRPPGRMDPADFVLRDFTSTERRELPLLLEHAADSVEMLIADGL 186
Query: 186 TESARHFNTI 195
+ ++ +
Sbjct: 187 EPAQNRYHAL 196
>gi|300087756|ref|YP_003758278.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527489|gb|ADJ25957.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 188
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 107/186 (57%), Gaps = 12/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG +Y TRHN+GFE++ FA IS N C++ G+G +GD PV+LAKPQ
Sbjct: 3 LIIGLGNPGKEYHHTRHNIGFEILGRFARFHNISFNKRSCQSRIGEGKIGDQPVILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSG++ L YK+ ++V HDD+ LP G +R+R GG GGHNG+KS++ +
Sbjct: 63 TYMNLSGQAVAALIKRYKVTPKDIIVIHDDLDLPIGKIRIRLEGGAGGHNGIKSIIQSIG 122
Query: 139 --------RGIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIGRP D +L +F+ E I+ + + + L+ ++S
Sbjct: 123 TICFTRIKVGIGRPTTTGDRIEIVDHVLTQFSQDEAEMINKTVIDALGALETMISGDYNA 182
Query: 188 SARHFN 193
+ FN
Sbjct: 183 AMNKFN 188
>gi|312194511|ref|YP_004014572.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
gi|311225847|gb|ADP78702.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
Length = 195
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 9/186 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +Y TRHN GF ++D AE G + + +A Q + +LA+P
Sbjct: 9 WLVVGLGNPGPEYASTRHNAGFLVVDLLAERHGARLRSHKARADAAQLRLAGVSAVLARP 68
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+TYMN+SG L +++K+ RV+V HD++ +P G +RL+ GG GHNGL+S+ ++
Sbjct: 69 RTYMNVSGPPVAALRSFFKVDPARVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSSL 128
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPPG+MDP F+L+ F R+ + + + ++ L+++GL +
Sbjct: 129 GTRDYLRVRFGIGRPPGRMDPADFVLRDFAVPERKELPFLVDRAADAVEALVAEGLEPAQ 188
Query: 190 RHFNTI 195
F+ +
Sbjct: 189 NRFHAL 194
>gi|374987105|ref|YP_004962600.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
gi|297157757|gb|ADI07469.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
Length = 196
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 15/196 (7%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 72
T A PWL VGLGNPG +Y RHNVGF + D A+ +A +G VG AP
Sbjct: 2 TDEASPWLVVGLGNPGPEYAANRHNVGFMVADLLADRMRGRFKAHKSRAQVVEGRVG-AP 60
Query: 73 ------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHG 126
V++AKP ++MNLSG T L +YK+P+ V+ HD++ + G LRL+ GG
Sbjct: 61 GPASRRVIVAKPMSFMNLSGGPTTALRDFYKVPVGHVIAVHDELDIDYGALRLKLGGGDN 120
Query: 127 GHNGLKSVMNN-----FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
GHNGLKS+ + FR GIGRPPG+MD AF+L+ F+A R+ +D + + ++
Sbjct: 121 GHNGLKSITKSLSPDYFRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVE 180
Query: 179 LLLSKGLTESARHFNT 194
L+ GL + +N+
Sbjct: 181 TLIVDGLERAQSTYNS 196
>gi|240144342|ref|ZP_04742943.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
gi|257203686|gb|EEV01971.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
Length = 212
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF+++DA AE IS++ KA G+G + V+LAKPQ
Sbjct: 23 LIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKPQ 82
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES L YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 83 TYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIAMT 142
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
NF G+G P D +L F+A R ++ A+ VE +++++ G T++A
Sbjct: 143 GTQNFLRIKVGVGEKPAGWDLADHVLGHFDAADRAEVEKAIGHAVEAAEMMIT-GETDAA 201
Query: 190 RHFNTIQK 197
+ ++K
Sbjct: 202 MNRYNVKK 209
>gi|347532905|ref|YP_004839668.1| aminoacyl-tRNA hydrolase [Roseburia hominis A2-183]
gi|345503053|gb|AEN97736.1| aminoacyl-tRNA hydrolase [Roseburia hominis A2-183]
Length = 194
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN GF+++DA AE IS++ KA FG+G +G V+LAKP
Sbjct: 2 FLIVGLGNPGRQYEHTRHNAGFDVMDALAEKYNISISESGHKALFGKGMIGGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
QT+MNLSGES L YYK+ P +LV DD+ L G +R+R G GGHNG+K+++
Sbjct: 62 QTFMNLSGESVAELLHYYKIDPEEELLVIFDDISLAPGNIRIRKKGSAGGHNGIKNIIAM 121
Query: 136 ---NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF+ G+G P D +L + + R + A++E V+ +++L + ++
Sbjct: 122 TGTENFKRIKVGVGEKPAGWDLADHVLGRMSEEDRAAFEEAVKESVKAAEMILEDEIDQA 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNDFN 186
>gi|332981375|ref|YP_004462816.1| peptidyl-tRNA hydrolase [Mahella australiensis 50-1 BON]
gi|332699053|gb|AEE95994.1| peptidyl-tRNA hydrolase [Mahella australiensis 50-1 BON]
Length = 188
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPGD+YK TRHNVGF +ID A+ GI +N + KA +G+ ++G V+LAKP
Sbjct: 2 YIIVGLGNPGDRYKYTRHNVGFMVIDILAQRNGIKLNKLDYKALWGEAWIGAEKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGES + Y+K PL ++V +DD+ LP G +R+R G G HNG++S++
Sbjct: 62 QTFMNASGESVYDIVRYFKPPLEHLIVIYDDIDLPLGRIRIRTKGSAGTHNGMRSIIYML 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GI RP MD ++L F+ + I A++ + + ++ G+ +
Sbjct: 122 DSDAFPRIRVGIDRPGPGMDLVNYVLSGFDEQEQPIIYKAMERAADAAEAIVKDGIEIAM 181
Query: 190 RHFN 193
+N
Sbjct: 182 SKYN 185
>gi|440785115|ref|ZP_20962065.1| peptidyl-tRNA hydrolase [Clostridium pasteurianum DSM 525]
gi|440218487|gb|ELP57707.1| peptidyl-tRNA hydrolase [Clostridium pasteurianum DSM 525]
Length = 187
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHNVGF+++D + I MN + K +G+G + + V+ KP
Sbjct: 2 YLIVGLGNPGKEYENTRHNVGFDVLDLLCDKYNIDMNRIKFKGMYGEGKIENEKVIFLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSGES + A+YK+P ++V +DD+ L G +R+R +G GGHNG+K+++ N
Sbjct: 62 MTFMNLSGESVKEVCAFYKIPNKNIIVIYDDISLDIGRMRIRKSGSAGGHNGIKNIIFNL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P G D + +L KF+ R ++ V+ + +++ G+ E+
Sbjct: 122 STDIFSRIKIGVGEPKG--DLVSHVLGKFSEDDRLEVEKVFNAAVKAINCIITDGVYEAM 179
Query: 190 RHFNTIQ 196
FN ++
Sbjct: 180 NSFNGLK 186
>gi|255524038|ref|ZP_05391000.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296186895|ref|ZP_06855296.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|255512325|gb|EET88603.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296048609|gb|EFG88042.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
Length = 187
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +Y+ TRHNVGF++ID ++ IS+N K +G+G + V+L KP
Sbjct: 2 FLIVGLGNIGKQYEHTRHNVGFDIIDLVSDKYNISINREKFKGMYGEGSIASEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +YK+ +V+V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 STYMNLSGESIREVVNFYKISNEQVIVLYDDISLEVGRLRIREKGSAGGHNGIKSIIANL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P ++ + +L +FN RE++ A V+ ++ ++ G+ E+
Sbjct: 122 GTDVFPRIKVGVGQPKSEL--VSHVLGRFNVEDREKVIKAFDVSVDAVEHIIKYGVDEAM 179
Query: 190 RHFNTIQ 196
FN+ +
Sbjct: 180 NKFNSFK 186
>gi|145341531|ref|XP_001415860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576083|gb|ABO94152.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 189
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 115/189 (60%), Gaps = 13/189 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL GLGNPG K+ GTRHNVGFE++DA A GI + + +A G G +G + V+LAKP
Sbjct: 1 WLICGLGNPGAKFAGTRHNVGFEVVDALARRAGIELTSTKHRAVLGVGKLGRSAVVLAKP 60
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSG+S + +K+ +R+++ +DD+ G LR++ +G HGGHNG++SV+++
Sbjct: 61 QTFMNLSGKSVREMMRAFKIGKSRIVIVYDDLETKLGELRMKTSGSHGGHNGVRSVIDDA 120
Query: 139 R-----------GIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLK-LLLSKGL 185
GIGRP + ++L +F+ +++ A+++ VE L+ +LL
Sbjct: 121 TRGDRSFARVKIGIGRPKDENTAVYEYVLSRFDEDDAVKVNGAVEDAVEALQEVLLDNKF 180
Query: 186 TESARHFNT 194
++ +NT
Sbjct: 181 GDAMTRYNT 189
>gi|120405738|ref|YP_955567.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
gi|166229427|sp|A1TEG1.1|PTH_MYCVP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119958556|gb|ABM15561.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
Length = 192
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG +Y TRHN GF ++D A+ G VH K A G + P
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHNAGFMVVDILADRMGEKFK-VHKKSGAEVATGRLAGRP 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRVYMNESGRQVGPLAKFYSVAPADVVIVHDELDIDFGRIRLKAGGGVAGHNGLR 119
Query: 133 SVM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N+F+ GIGRPPG +F+L+ FN++ R+ + T L++ + +LL+++
Sbjct: 120 SVASALGGNDFQRVRVGIGRPPGHKSGASFVLENFNSVERKEVPTILEQAADATELLVAQ 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|387928177|ref|ZP_10130855.1| peptidyl-tRNA hydrolase [Bacillus methanolicus PB1]
gi|387587763|gb|EIJ80085.1| peptidyl-tRNA hydrolase [Bacillus methanolicus PB1]
Length = 186
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GFE+ID +E I ++ K +G GFV ++L KP
Sbjct: 3 LIVGLGNPGKQYDKTRHNIGFEVIDKLSELLNIPLDQAKLKGNYGMGFVNGEKLILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES + YY + L +LV +DD+ LP G +RLR G GGHNG+KS +
Sbjct: 63 TYMNLSGESICAVMDYYDIALEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIAHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++L +F +E +D ++ E + L K +
Sbjct: 123 SQEFNRIRVGIDRPPAGMSVVDYVLGRFREDEQEIMDDVIKTCAEACEAWLQKPFLQVMN 182
Query: 191 HFN 193
+N
Sbjct: 183 EYN 185
>gi|116751072|ref|YP_847759.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
gi|116700136|gb|ABK19324.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
Length = 201
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 106/181 (58%), Gaps = 9/181 (4%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTY 81
VGLGNPG +Y+ TRHN GF ++D A GI+M +A++G GFV VLLAKP TY
Sbjct: 15 VGLGNPGPQYEHTRHNAGFMVVDRLAAGFGIAMQERKFRASWGTGFVEGRKVLLAKPLTY 74
Query: 82 MNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR-- 139
MNLSG + G + Y+ P RVLV HDD+ LPCG +RL GG GGH G+ S+M +
Sbjct: 75 MNLSGAAVGEILKYFGFPSERVLVVHDDLDLPCGRVRLARKGGAGGHKGIASIMAHLNTR 134
Query: 140 -------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHF 192
GIGRP ++++LQ A + + + G EV++ +L+ GL+ S +
Sbjct: 135 DFPRLKLGIGRPLHGEPVESYVLQPPYAEDARKFEDMILLGEEVVRSVLAAGLSSSMNDY 194
Query: 193 N 193
N
Sbjct: 195 N 195
>gi|187935710|ref|YP_001884405.1| peptidyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
gi|238691600|sp|B2TI10.1|PTH_CLOBB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187723863|gb|ACD25084.1| aminoacyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
Length = 191
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG KY TRHN+GFE+ID + I +N + +G+GF+ + V+L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P +D ++L KF+ +E + +++ ++ ++ + + +
Sbjct: 122 STDVFPRIKVGVGQP--NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIKQDVNSAM 179
Query: 190 RHFNTIQKYKHI 201
FN + K I
Sbjct: 180 NKFNGFKANKSI 191
>gi|365845743|ref|ZP_09386497.1| aminoacyl-tRNA hydrolase [Flavonifractor plautii ATCC 29863]
gi|364559189|gb|EHM37180.1| aminoacyl-tRNA hydrolase [Flavonifractor plautii ATCC 29863]
Length = 198
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG+KY+ TRHNVGF +D AE + + + +A VG VLL KP
Sbjct: 13 WLVVGLGNPGEKYENTRHNVGFLTVDELAERARVPVQKLKHRALTNTLEVGSVKVLLMKP 72
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE+ G A +YKLP RVLV DD+ LP G LR+R G GGHNGLKS++ +
Sbjct: 73 VTYMNLSGEAVGEAARFYKLPPERVLVISDDVSLPVGKLRIRKGGSAGGHNGLKSIIQHL 132
Query: 139 ---------RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G+ P D ++L KF + I A+++ + ++ L+ +G ++
Sbjct: 133 GTDQFPRIKVGVGQKPHPDYDMADWVLSKFAGEDLKTITEAIRKAADAVECLIQEGPDKA 192
Query: 189 ARHFN 193
FN
Sbjct: 193 MNRFN 197
>gi|386355761|ref|YP_006054007.1| peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806269|gb|AEW94485.1| peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 200
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 8/189 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
A A PWL GLGNPG +Y G RHN+GF ++D AE G + +A +G + V
Sbjct: 12 APAGPWLVAGLGNPGPEYAGNRHNIGFMVVDLLAERIGGRFKSHRSRAQVVEGRIAGQRV 71
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKP TYMN SG L +YK+P+ ++ HD++ + LRL+ GG GHNGLKS
Sbjct: 72 VLAKPMTYMNTSGGPVTALRDFYKVPVANLVAVHDELDIGYATLRLKRGGGDNGHNGLKS 131
Query: 134 VMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+M+ +F+L+ F++ R+ +D + + ++ L+++GL
Sbjct: 132 ITKALGPEYLRVRCGIGRPPGRMEVASFVLKDFSSAERKELDWFVDRAADAVEALIAEGL 191
Query: 186 TESARHFNT 194
+ +N+
Sbjct: 192 ERAQSTYNS 200
>gi|188588535|ref|YP_001919597.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
gi|238689626|sp|B2UXS9.1|PTH_CLOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188498816|gb|ACD51952.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
Length = 191
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG KY TRHN+GFE+ID + I +N K +G+GF+ + V+L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P + ++L KF+ +E + +++ ++ ++ + + +
Sbjct: 122 STDVFPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINSAM 179
Query: 190 RHFNTIQKYKHI 201
FN + K I
Sbjct: 180 NKFNGFKANKSI 191
>gi|404372896|ref|ZP_10978177.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
gi|226914271|gb|EEH99472.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
Length = 191
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y GTRHN+GFE ID + I +N K +G+GF+ + V+L KP
Sbjct: 2 FLIVGLGNPGKEYDGTRHNIGFEAIDYISNKYNIDINRTKFKGVYGEGFINNNKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +YKL + V+V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 TTYMNLSGESIREVINFYKLENDEVIVIYDDISLEVGKLRIREKGSAGGHNGIKSIIANI 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P D + +L +FN + + + + +++++ G E+
Sbjct: 122 GTDIFPRVKIGVGQPTS--DLVSHVLGRFNKEDMDSLIEVIDASSKAVEVIIKDGTKEAM 179
Query: 190 RHFNTIQKYK 199
FN + K
Sbjct: 180 NRFNGFKTSK 189
>gi|357399722|ref|YP_004911647.1| Peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337766131|emb|CCB74842.1| Peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 195
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 8/189 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
A A PWL GLGNPG +Y G RHN+GF ++D AE G + +A +G + V
Sbjct: 7 APAGPWLVAGLGNPGPEYAGNRHNIGFMVVDLLAERIGGRFKSHRSRAQVVEGRIAGQRV 66
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKP TYMN SG L +YK+P+ ++ HD++ + LRL+ GG GHNGLKS
Sbjct: 67 VLAKPMTYMNTSGGPVTALRDFYKVPVANLVAVHDELDIGYATLRLKRGGGDNGHNGLKS 126
Query: 134 VMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+M+ +F+L+ F++ R+ +D + + ++ L+++GL
Sbjct: 127 ITKALGPEYLRVRCGIGRPPGRMEVASFVLKDFSSAERKELDWFVDRAADAVEALIAEGL 186
Query: 186 TESARHFNT 194
+ +N+
Sbjct: 187 ERAQSTYNS 195
>gi|331086146|ref|ZP_08335228.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406305|gb|EGG85819.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 192
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 10/188 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ +GLGNP +Y+GTRHNVGF++ID E I+++T KA G+G + VLL KP
Sbjct: 2 YIIIGLGNPTAQYEGTRHNVGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ VLV +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESVRELVEYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D ++L F+ R +++ E ++L+L+ + +
Sbjct: 122 LGTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEDGYDRATEAVRLILAGEIDAA 181
Query: 189 ARHFNTIQ 196
+N Q
Sbjct: 182 MNQYNKKQ 189
>gi|309789598|ref|ZP_07684179.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG-6]
gi|308228334|gb|EFO81981.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG6]
Length = 189
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL +GLGNPG+KY TRHN+GF +DA A+ G+ T + +G + V LAKP
Sbjct: 2 WLLIGLGNPGEKYDRTRHNIGFACLDALAKRHGLEFRTKRANSLVAEGSIAGQRVALAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
QTYMN SG + L ++YK+ P +LV +DD+ LP LRLR G G HNG++S++
Sbjct: 62 QTYMNESGRAVSALRSWYKIEPAQDLLVIYDDLDLPFARLRLRERGSSGTHNGMRSIVAQ 121
Query: 136 ---NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
N F GI +PPG+MD A++L +FN +I + +++L G+ +
Sbjct: 122 LGSNAFPRLRVGIDQPPGKMDAAAYVLSRFNKEEEAQIPDLCDRVADAAEVVLRDGVIAA 181
Query: 189 ARHFNT 194
+N
Sbjct: 182 MNRYNA 187
>gi|220930454|ref|YP_002507363.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
gi|220000782|gb|ACL77383.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
Length = 189
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 100/161 (62%), Gaps = 9/161 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+LFVGLGNPG K++ TRHNVGF+ ID + I ++ + KA +G+G + +L KP
Sbjct: 5 YLFVGLGNPGTKFENTRHNVGFDTIDYISVKYNIKLSKIGFKALYGEGSIEGIRTILVKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YKLPL R++V +DD+ L G +R+R G G HNG+KS++
Sbjct: 65 QTFMNLSGESVREIVDWYKLPLERLIVIYDDIDLEPGKMRVRPKGSSGTHNGMKSIIYQL 124
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
+ GIGR P + D ++L KF+ R+ ID ++
Sbjct: 125 QDDSFPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSI 165
>gi|291540814|emb|CBL13925.1| peptidyl-tRNA hydrolase [Roseburia intestinalis XB6B4]
Length = 212
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF+++DA AE IS++ KA G+G + V+LAKPQ
Sbjct: 23 LIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKPQ 82
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES L YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 83 TYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIAMT 142
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
NF G+G P D +L F+ R ++ A+ VE +++++ G T++A
Sbjct: 143 GTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMIT-GETDAA 201
Query: 190 RHFNTIQK 197
+ ++K
Sbjct: 202 MNRYNVKK 209
>gi|345008848|ref|YP_004811202.1| peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344035197|gb|AEM80922.1| Peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
Length = 196
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 109/195 (55%), Gaps = 13/195 (6%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG--- 69
T A PWL VGLGNPG +Y G RHNVGF + D A G +A +G VG
Sbjct: 2 TDDASPWLVVGLGNPGGEYVGNRHNVGFMVADLLAGRMGARFKAHKSRAQVVEGRVGPPG 61
Query: 70 --DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
V++AKP ++MNLSG L +YK+P+ V+ HD++ + G LRL+ GG G
Sbjct: 62 PSSRRVVVAKPMSFMNLSGGPVTALRDFYKVPVGHVVAVHDELDIDYGALRLKVGGGDNG 121
Query: 128 HNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
HNGLKS+ + GIGRPPG+MD AF+L+ F+A R+ +D + + ++
Sbjct: 122 HNGLKSITKSLGADYCRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVET 181
Query: 180 LLSKGLTESARHFNT 194
L++ GL + +N+
Sbjct: 182 LIADGLERAQGTYNS 196
>gi|251779900|ref|ZP_04822820.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084215|gb|EES50105.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 191
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG KY TRHN+GFE+ID + I +N K +G+GF+ + V+L KP
Sbjct: 2 FLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 TTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIANL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P + ++L KF+ +E + +++ ++ ++ + + +
Sbjct: 122 STDVFPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDVNSAM 179
Query: 190 RHFNTIQKYKHI 201
FN + K I
Sbjct: 180 NKFNGFKANKSI 191
>gi|170755332|ref|YP_001783180.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|429244323|ref|ZP_19207788.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001628]
gi|229470295|sp|B1IGZ7.1|PTH_CLOBK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169120544|gb|ACA44380.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|428758644|gb|EKX81051.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001628]
Length = 189
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P + ++L KF+ RE ID L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDENV--VNYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|152973899|ref|YP_001373416.1| peptidyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
gi|189038278|sp|A7GJW3.1|PTH_BACCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152022651|gb|ABS20421.1| Aminoacyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
Length = 186
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 101/184 (54%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ L ++ +DD+ LP G LRLR G GGHNG+KS + +
Sbjct: 63 TYMNLSGESIRPLMDYYKIDLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F A ++ A+++ + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEEMVDVNHAIEKAANACEEWLNKSFLQVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 DFNN 186
>gi|373119607|ref|ZP_09533701.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371662163|gb|EHO27372.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 198
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG+KY+ TRHNVGF +D AE + + + +A VG VLL KP
Sbjct: 13 WLVVGLGNPGEKYENTRHNVGFLTVDELAERARVPVQKLKHRALTNTLEVGGVKVLLMKP 72
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE+ G A +YKLP RVLV DD+ LP G LR+R G GGHNGLKS++ +
Sbjct: 73 VTYMNLSGEAVGEAARFYKLPPERVLVISDDVSLPVGKLRIRKGGSAGGHNGLKSIIQHL 132
Query: 139 ---------RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G+ P D ++L KF + I A+++ + ++ L+ +G ++
Sbjct: 133 GTDQFPRIKVGVGQKPHPDYDMADWVLSKFAGEDLKTITEAIRKAADAVECLIQEGPDKA 192
Query: 189 ARHFN 193
FN
Sbjct: 193 MNRFN 197
>gi|429765477|ref|ZP_19297769.1| aminoacyl-tRNA hydrolase [Clostridium celatum DSM 1785]
gi|429186296|gb|EKY27247.1| aminoacyl-tRNA hydrolase [Clostridium celatum DSM 1785]
Length = 191
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y GTRHN+GFE +D A+ I +N + K FG+G + V+L KP
Sbjct: 2 FLIVGLGNPGSEYNGTRHNIGFEAVDYIADKYNIELNRIKFKGIFGEGLINGKKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +YK+ ++V +DD+ L G LR+R G HGGHNG+KS++ N
Sbjct: 62 TTYMNLSGESIREVVNFYKISNEEIIVIYDDISLDVGRLRIREKGSHGGHNGIKSIIANL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P G + + +L KFN + L E + ++L + ++
Sbjct: 122 GTDVFPRVKIGVGAPKGNL--VSHVLGKFNEEEINVLRKTLIATEEAVNVMLKNDVKDAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 NKFN 183
>gi|226323671|ref|ZP_03799189.1| hypothetical protein COPCOM_01446 [Coprococcus comes ATCC 27758]
gi|225207855|gb|EEG90209.1| aminoacyl-tRNA hydrolase [Coprococcus comes ATCC 27758]
Length = 191
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +KY+GTRHNVGF+++D AE I+++T +A G+G + VLL KP
Sbjct: 2 FIIAGLGNPDEKYQGTRHNVGFDVVDRLAEKYQIAIDTKKHRALIGKGVIEGQKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ P +LV +DD+ L G LR+R G GGHNG+K+++ N
Sbjct: 62 QTYMNLSGESIRSLVEYYKIDPEEELLVIYDDISLEVGQLRIRRKGSAGGHNGIKNIIAN 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D ++L KF+ R ++ E L++ + ++
Sbjct: 122 LGSSVFPRIKVGVGEKPKGYDLADYVLGKFSKEDRVLMEEGYDLACEASALIMQGAIDQA 181
Query: 189 ARHFNTIQK 197
+N +K
Sbjct: 182 MNEYNQKKK 190
>gi|111225610|ref|YP_716404.1| peptidyl-tRNA hydrolase [Frankia alni ACN14a]
gi|123142574|sp|Q0RCD6.1|PTH_FRAAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|111153142|emb|CAJ64889.1| Peptidyl-tRNA hydrolase (PTH) [Frankia alni ACN14a]
Length = 197
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 9/187 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG Y G RHN GF ++D AE G + + +A + + +LA+
Sbjct: 10 PWLVVGLGNPGPGYAGNRHNAGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILAR 69
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P ++MNLSG + +YK+ RV+V HD++ +P G +RL+ GG GHNGL+S+ +
Sbjct: 70 PLSFMNLSGGPVSAVRTFYKIDPARVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSISSA 129
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+MDP ++L+ F A R + L+ + +++L++ GL +
Sbjct: 130 LGTRDYLRVRVGIGRPPGRMDPADYVLRDFAAAERRELPLLLEHSADSVEMLITDGLEPT 189
Query: 189 ARHFNTI 195
++ +
Sbjct: 190 QNRYHAL 196
>gi|296271107|ref|YP_003653739.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
gi|296093894|gb|ADG89846.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
Length = 209
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
+ R WL VGLGNPG +Y RHN GF + D A G +A +G + PV
Sbjct: 10 STPRRWLIVGLGNPGPEYAMNRHNAGFMVADELANRIGGRFTVHKTRAQVAEGRLSGVPV 69
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKP +YMNLSG LA YYK+ ++V HD++ +P G LR + GG GHNGLKS
Sbjct: 70 VLAKPLSYMNLSGGPVKALADYYKIGPENIVVIHDELDIPFGALRAKTGGGDNGHNGLKS 129
Query: 134 VMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
+ GIGRPPG+MDP ++L+ F R+ + + ++++ LL++G
Sbjct: 130 ITKALGTRDYSRIRFGIGRPPGRMDPATYVLRDFATAERKDLPFLIDRAADMVESLLTEG 189
Query: 185 LTESARHFNTIQKY 198
L + F+ Y
Sbjct: 190 LAATQNKFHGSDLY 203
>gi|291535573|emb|CBL08685.1| peptidyl-tRNA hydrolase [Roseburia intestinalis M50/1]
Length = 212
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF+++DA AE IS++ KA G+G + V+LAKPQ
Sbjct: 23 LIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKPQ 82
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES L YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 83 TYMNLSGESVTELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIAMT 142
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
NF G+G P D +L F+ R ++ A+ VE +++++ G T++A
Sbjct: 143 GTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMIT-GETDAA 201
Query: 190 RHFNTIQK 197
+ ++K
Sbjct: 202 MNRYNVKK 209
>gi|212637895|ref|YP_002314415.1| peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
gi|212559375|gb|ACJ32430.1| Peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
Length = 207
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHNVGF +ID A G+S+N + F G + V+L KP
Sbjct: 24 LFVGLGNPGKEYEQTRHNVGFMVIDELAHRWGLSLNQTKFQGIFTSGMISGEKVILCKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSGE PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++++ +
Sbjct: 84 TYMNLSGECVRPLMDYYNIDVDDLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHHLK 143
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L ++ A + +I+ A+Q+ + + L +
Sbjct: 144 TEQFKRIRIGIDRPKNGMRVSDYVLGRWTAEEKIQIEQAIQKAADACERSLKISFAQVMN 203
Query: 191 HFN 193
FN
Sbjct: 204 EFN 206
>gi|210608665|ref|ZP_03287942.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
gi|210152922|gb|EEA83928.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
Length = 224
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNP +Y+GTRHN GF++ID AE IS++ C+A G+G + VLL KP
Sbjct: 35 FVIVGLGNPTAQYEGTRHNAGFDVIDVLAEKYNISVDARKCRAFCGKGVIAGQKVLLVKP 94
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES G + YYK+ P + +LV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 95 QTYMNLSGESVGGIVNYYKIDPESDLLVIYDDISLDVGQLRIRKKGSAGGHNGIKSIIAH 154
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D ++L F+ RE ++ + + ++ ++ + +
Sbjct: 155 LGTTVFPRIKVGVGEKPKNYDLADYVLGHFSKQERELMEEGYEHASDAVEQIVQGEIEAA 214
Query: 189 ARHFN 193
FN
Sbjct: 215 MNVFN 219
>gi|160939695|ref|ZP_02087043.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
gi|158437486|gb|EDP15250.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
Length = 230
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+ TRHNVGFE+ID A+ G ++ K +G+G +G VLL KP
Sbjct: 43 YIIAGLGNPTREYEKTRHNVGFEVIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLKP 102
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++++
Sbjct: 103 QTFMNLSGESVRAAADFYKVDPEHIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIISHL 162
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F+ R ++ A +E +++++++G +
Sbjct: 163 GTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAVMEDAFREAAGAVEMMITQGADAAM 222
Query: 190 RHFN 193
FN
Sbjct: 223 NQFN 226
>gi|325662343|ref|ZP_08150952.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471345|gb|EGC74568.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 192
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 10/188 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ +GLGNP +Y+GTRHNVGF++ID E I+++T KA G+G + V+L KP
Sbjct: 2 YIIIGLGNPTAQYEGTRHNVGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ VLV +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESVRELVDYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D ++L F+ R +++ E ++L+L+ + +
Sbjct: 122 LGTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEEGYDRATEAVRLILAGEIDAA 181
Query: 189 ARHFNTIQ 196
+N Q
Sbjct: 182 MNQYNKKQ 189
>gi|376263010|ref|YP_005149730.1| peptidyl-tRNA hydrolase [Clostridium sp. BNL1100]
gi|373947004|gb|AEY67925.1| peptidyl-tRNA hydrolase [Clostridium sp. BNL1100]
Length = 189
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG K++ TRHNVGF+ ID + I ++ + KA +G+G + +L KP
Sbjct: 5 YLLVGLGNPGTKFENTRHNVGFDTIDYISAKYNIKLSKIGFKAVYGEGEIEGVRTILVKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YKLP+ R+ V +DD+ L G +R+R G G HNG+KS++
Sbjct: 65 QTFMNLSGESVREIVDWYKLPIERLTVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIYQL 124
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GIGR P + D ++L KF+ R+ ID ++++ + ++ G ++
Sbjct: 125 QDDRFPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSVEKAAQAAIMIAQSGPEKAM 184
Query: 190 RHFN 193
+FN
Sbjct: 185 NNFN 188
>gi|163847223|ref|YP_001635267.1| peptidyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222525064|ref|YP_002569535.1| peptidyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
gi|189038282|sp|A9WBS1.1|PTH_CHLAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783861|sp|B9LE93.1|PTH_CHLSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163668512|gb|ABY34878.1| Aminoacyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222448943|gb|ACM53209.1| Aminoacyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
Length = 188
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 10/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG++Y TRHN+GF +D AE G++ + +G + V+LAKP
Sbjct: 2 WLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSG++ L +YK+ P +LV +DD+ LP LR+R G G HNG++S++
Sbjct: 62 QTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVAQ 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIG+PPG+MD ++L +F + L + ++++L +GLT +
Sbjct: 122 LGTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTTA 181
Query: 189 ARHFNTI 195
+N +
Sbjct: 182 MNRYNPL 188
>gi|148381480|ref|YP_001256021.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|153931979|ref|YP_001385855.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|153936610|ref|YP_001389262.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
gi|166199325|sp|A7FPJ7.1|PTH_CLOB1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199326|sp|A5I7R5.1|PTH_CLOBH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148290964|emb|CAL85100.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|152928023|gb|ABS33523.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|152932524|gb|ABS38023.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
Length = 189
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P + ++L KF+ RE I+ L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|424835857|ref|ZP_18260516.1| peptidyl-tRNA hydrolase [Clostridium sporogenes PA 3679]
gi|365977727|gb|EHN13825.1| peptidyl-tRNA hydrolase [Clostridium sporogenes PA 3679]
Length = 189
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G++YK TRHN+GF+ ID +E I +N K ++G+G +G+ V+L KP
Sbjct: 2 YLVVGLGNIGEEYKKTRHNIGFDAIDIISEKYNIKINRQKFKGSYGEGRIGNEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAVNFYKINKENIIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P G + ++L KF+ RE I+ L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDGNV--VNYVLGKFSKEQREIIEKTLAMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|302542982|ref|ZP_07295324.1| aminoacyl-tRNA hydrolase [Streptomyces hygroscopicus ATCC 53653]
gi|302460600|gb|EFL23693.1| aminoacyl-tRNA hydrolase [Streptomyces himastatinicus ATCC 53653]
Length = 198
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 13/193 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----- 69
+ PWL VGLGNPG +Y RHNVGF + + AE G +A +G +G
Sbjct: 6 ASSPWLVVGLGNPGPEYAANRHNVGFMVAELLAERMGGRFKAHKSRAQVVEGRIGPPGPG 65
Query: 70 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
V++AKP ++MNLSG T L +YK+P + V+ HD++ + G LRL+ GG GHN
Sbjct: 66 SRRVIVAKPMSFMNLSGGPTTALRDFYKVPTSHVIAIHDELDIDYGALRLKLGGGDNGHN 125
Query: 130 GLKSVMNN-----FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
GLKS+ + FR GIGRPPG+MD AF+L+ F+A R +D + + ++ L+
Sbjct: 126 GLKSITKSGGPDYFRIRFGIGRPPGRMDVAAFVLKDFSAAERRELDYFVDRAADAVETLI 185
Query: 182 SKGLTESARHFNT 194
GL + +N+
Sbjct: 186 VDGLERAQGTYNS 198
>gi|258513563|ref|YP_003189785.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
gi|257777268|gb|ACV61162.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
Length = 196
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 104/185 (56%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF +ID AE G+ + ++ GQG++G V+LAKP
Sbjct: 3 LIVGLGNPGIEYRNTRHNIGFMVIDQLAEKYGVDVQKKMMRSVLGQGWLGSQKVILAKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSG+S L +YKL +LV DD+ L G LRLR G GGHNGLKS++
Sbjct: 63 TYMNLSGQSVQALMNWYKLTAQELLVICDDLNLEAGHLRLRKKGSDGGHNGLKSIIQALG 122
Query: 139 --------RGIGRP--PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRP PGQ + +F+L KF E + + G + + + G+ +
Sbjct: 123 TSDFPRLRLGIGRPSHPGQ-EQVSFVLGKFAPQEAELLSQLIGRGEQAAAVWVENGIDAA 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNEFN 186
>gi|387819821|ref|YP_005680168.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
gi|322807865|emb|CBZ05440.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
Length = 189
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P + ++L KF+ RE I+ L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLSMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|169825683|ref|YP_001695841.1| peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
gi|168990171|gb|ACA37711.1| Peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
Length = 203
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Query: 5 RFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG 64
RF RR + VGLGNPG Y+ TRHN+GF++IDA AE G + +
Sbjct: 10 RFERREVLMKI-----IVGLGNPGKPYEHTRHNIGFDVIDALAEKWGTPLTNSKFNGMYT 64
Query: 65 QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 124
+ VLL KP TYMNLSGE GPL Y+ + + ++V +DD+ L G LRLR G
Sbjct: 65 TVHRPEGKVLLVKPLTYMNLSGECVGPLMDYFDIDVEDLIVIYDDLDLETGKLRLRQKGS 124
Query: 125 HGGHNGLKSVM--------NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
GGHNG+KS++ N R GI RPP M ++L KF+ + ++ A+++ V
Sbjct: 125 AGGHNGIKSLIQHLGTQEFNRIRVGISRPPAGMKVADYVLGKFSKEDQVSMNEAIEKSVN 184
Query: 176 VLKLLLSKGLTESARHFN 193
+++ LSK + HFN
Sbjct: 185 AVEVSLSKPFLDVMNHFN 202
>gi|228937354|ref|ZP_04100001.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228970240|ref|ZP_04130900.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976810|ref|ZP_04137223.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|384184134|ref|YP_005570030.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672423|ref|YP_006924794.1| peptidyl-tRNA hydrolase Pth [Bacillus thuringiensis Bt407]
gi|423387016|ref|ZP_17364271.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-2]
gi|423526650|ref|ZP_17503095.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB1-1]
gi|452196427|ref|YP_007476508.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228782906|gb|EEM31071.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|228789475|gb|EEM37394.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822312|gb|EEM68293.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326937843|gb|AEA13739.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401630270|gb|EJS48076.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-2]
gi|402455143|gb|EJV86927.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB1-1]
gi|409171552|gb|AFV15857.1| peptidyl-tRNA hydrolase Pth [Bacillus thuringiensis Bt407]
gi|452101820|gb|AGF98759.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 207
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 112/204 (54%), Gaps = 13/204 (6%)
Query: 4 NRFLRRGFCT----AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC 59
N+F R F + + R L VGLGNPG +Y+ TRHN+GF ID A+ IS+N
Sbjct: 4 NQFWLRLFVSKKESSGTRMKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKF 63
Query: 60 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 119
K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRL
Sbjct: 64 KGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRL 123
Query: 120 RHNGGHGGHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 170
R G GGHNG+KS +++ GI RP M ++L +F + ++ ++
Sbjct: 124 RMKGSAGGHNGVKSTISHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSI 183
Query: 171 QEGVEVLKLLLSKGLTESARHFNT 194
++ + + L+K + FN+
Sbjct: 184 EKAADACEEWLNKPFLQIMNTFNS 207
>gi|125975113|ref|YP_001039023.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
gi|125715338|gb|ABN53830.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
Length = 196
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 114/184 (61%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHNVGF+ ++ ++ I + + KA G G +G V+LAKP
Sbjct: 12 FVIVGLGNPGAKYENTRHNVGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAKP 71
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YK+P+ +++ +DD+ LP G LRLR G G HNG++SV+
Sbjct: 72 QTFMNLSGESVREIVEWYKIPVKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIYQL 131
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GI +PP D +++L +F+A R++ID A+++ + ++ +L G+ +
Sbjct: 132 QSEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDSAM 191
Query: 190 RHFN 193
+N
Sbjct: 192 NKYN 195
>gi|168181009|ref|ZP_02615673.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226950996|ref|YP_002806087.1| peptidyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|421834409|ref|ZP_16269460.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001627]
gi|254783862|sp|C1FNE6.1|PTH_CLOBJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182668160|gb|EDT80139.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226842368|gb|ACO85034.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|409744196|gb|EKN42857.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001627]
Length = 189
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P + ++L KF+ RE I+ L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|163938059|ref|YP_001642943.1| peptidyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|229131059|ref|ZP_04259972.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|423456682|ref|ZP_17433532.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X1-1]
gi|423471699|ref|ZP_17448443.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-2]
gi|423485303|ref|ZP_17461990.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-2]
gi|423520191|ref|ZP_17496672.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-4]
gi|423556952|ref|ZP_17533255.1| peptidyl-tRNA hydrolase [Bacillus cereus MC67]
gi|163860256|gb|ABY41315.1| Aminoacyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|228652396|gb|EEL08320.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|401128429|gb|EJQ36119.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X1-1]
gi|401135880|gb|EJQ43476.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-2]
gi|401155456|gb|EJQ62866.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-4]
gi|401194031|gb|EJR01028.1| peptidyl-tRNA hydrolase [Bacillus cereus MC67]
gi|402430797|gb|EJV62871.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-2]
Length = 207
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ +++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|399888053|ref|ZP_10773930.1| peptidyl-tRNA hydrolase [Clostridium arbusti SL206]
Length = 187
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 110/186 (59%), Gaps = 11/186 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHNVGF+++D ++ I+MN K +G G + D V+L KP
Sbjct: 3 LIVGLGNPGKEYEKTRHNVGFDILDLISDKYNINMNRTKFKGVYGDGKIDDERVILLKPA 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES + +YK+ ++V +DD+ L G +R+R +G GGHNG+K++++N
Sbjct: 63 TFMNLSGESVKAVCDFYKIKNENIIVIYDDISLSVGRMRIRKSGSAGGHNGIKNIISNLS 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G P G D + +L +F+ R ++ + ++ +++KG E+
Sbjct: 123 SDVFPRVKVGVGAPIG--DLISHVLGRFSTEDRIEVEKVFNVAADAVQCIITKGTCEAMN 180
Query: 191 HFNTIQ 196
+FN I+
Sbjct: 181 NFNGIK 186
>gi|307244017|ref|ZP_07526136.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
gi|306492541|gb|EFM64575.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
Length = 186
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHN GF+ +D AE GI ++ + KA G+G +G V+L KP
Sbjct: 2 YIIVGLGNPGKKYEHTRHNAGFDALDILAEEYGIKIDKIKHKALIGEGRIGSEKVVLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES + +YK+ ++ ++V +DD+ L G LR+R G G HNG+KS++
Sbjct: 62 QTYMNLSGESVQSVFQFYKVDMDHLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIKCL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+ RP D F+L + + E + + L++ V+ ++ ++ + +
Sbjct: 122 GSQEFPRVRVGVSRPDPNRDLADFVLSRVSKDQAEDMKSGLEKAVKTVEEIIRTDIDMAM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|426404603|ref|YP_007023574.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861271|gb|AFY02307.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 187
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +YK TRHN+GF +D E G KA QG + D PV+ KP
Sbjct: 2 WLIVGLGNPGGEYKLTRHNIGFMAVDYLMEGLGNPPIKNQFKAEIAQGKIKDHPVIFCKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV---- 134
QT+MNLSGES PL +YK+PL R++V HD++ P ++++ N GHGGHNG+KSV
Sbjct: 62 QTFMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSVSGLM 121
Query: 135 --MNNFR---GIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
M+ R G+GRP P ++L KF ++ L + + ++ ++ G+ ++
Sbjct: 122 GSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQKA 181
Query: 189 ARHFNT 194
+ FNT
Sbjct: 182 STKFNT 187
>gi|398785298|ref|ZP_10548322.1| peptidyl-tRNA hydrolase [Streptomyces auratus AGR0001]
gi|396994564|gb|EJJ05598.1| peptidyl-tRNA hydrolase [Streptomyces auratus AGR0001]
Length = 195
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 107/193 (55%), Gaps = 15/193 (7%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP--- 72
A PWL VGLGNPG +Y G RHNVGF + D AE G +A +G G AP
Sbjct: 4 ADPWLVVGLGNPGPEYAGNRHNVGFMVADLLAERMGGRFKAHKARAQVVEGRCG-APGPE 62
Query: 73 ---VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
V++AKP +YMN+SG T L +YK+P+ ++ HD++ + G LRL+ GG GHN
Sbjct: 63 SRRVVVAKPSSYMNVSGGPTTALRDFYKVPVANIIAIHDELDIDYGALRLKLGGGDNGHN 122
Query: 130 GLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
GLKS+ + GIGRPPG+M F+L+ F++ R +D + + ++ L+
Sbjct: 123 GLKSITKSLGAEYHRVRFGIGRPPGRMQVADFVLKDFSSAERRELDYFVDRAADAVETLI 182
Query: 182 SKGLTESARHFNT 194
GL + +N+
Sbjct: 183 VDGLERAQSTYNS 195
>gi|153940404|ref|YP_001392894.1| peptidyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|384463854|ref|YP_005676449.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
gi|166199327|sp|A7GJD4.1|PTH_CLOBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152936300|gb|ABS41798.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|295320871|gb|ADG01249.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
Length = 189
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P + ++L KF+ RE I+ L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|229074113|ref|ZP_04207160.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|229094773|ref|ZP_04225779.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|229100842|ref|ZP_04231654.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|229113726|ref|ZP_04243162.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|407708002|ref|YP_006831587.1| oligopeptide transporter, periplasmic-binding protein [Bacillus
thuringiensis MC28]
gi|423376674|ref|ZP_17353958.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1O-2]
gi|423439768|ref|ZP_17416674.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X2-1]
gi|423450071|ref|ZP_17426950.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5O-1]
gi|423462840|ref|ZP_17439608.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-1]
gi|423532196|ref|ZP_17508614.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB2-9]
gi|423542533|ref|ZP_17518923.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB4-10]
gi|423548764|ref|ZP_17525122.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB5-5]
gi|423621429|ref|ZP_17597207.1| peptidyl-tRNA hydrolase [Bacillus cereus VD148]
gi|228669723|gb|EEL25129.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|228682576|gb|EEL36641.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|228688641|gb|EEL42513.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|228709007|gb|EEL61133.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|401127078|gb|EJQ34808.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5O-1]
gi|401168329|gb|EJQ75594.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB4-10]
gi|401174295|gb|EJQ81506.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB5-5]
gi|401263458|gb|EJR69583.1| peptidyl-tRNA hydrolase [Bacillus cereus VD148]
gi|401641313|gb|EJS59033.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1O-2]
gi|402421811|gb|EJV54058.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X2-1]
gi|402422968|gb|EJV55189.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-1]
gi|402465274|gb|EJV96956.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB2-9]
gi|407385687|gb|AFU16188.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis MC28]
Length = 207
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ ++ +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVDDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|357391539|ref|YP_004906380.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
gi|311898016|dbj|BAJ30424.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
Length = 195
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG +Y RHN+GF +++ A+ G +A +G + V+LA+
Sbjct: 11 PWLVVGLGNPGKEYARNRHNIGFMVVELLAQRAGAKFKAHKSRAQVAEGRLAGRRVVLAE 70
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P ++MNLSG L +YK+P + ++ HD++ L LRL+ GG GHNGLKS+ +
Sbjct: 71 PMSFMNLSGGPVTALRDFYKVPTSAIVAVHDELDLDYAALRLKTGGGDNGHNGLKSMTKS 130
Query: 138 FR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPPG+M+ F+L+ F++ R+ +D + + ++ LLS GL +
Sbjct: 131 LGPDYHRVRCGIGRPPGRMEVADFVLKDFSSTERKDLDWFVDRAADAVEALLSDGLERAQ 190
Query: 190 RHFNT 194
+++N+
Sbjct: 191 QNYNS 195
>gi|317133015|ref|YP_004092329.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
gi|315470994|gb|ADU27598.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
Length = 208
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 10/189 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
A W+ GLGNPG +Y+GTRHN GF +D A G+ ++ KA G G V VLL
Sbjct: 20 APEWIVAGLGNPGIQYEGTRHNAGFAALDMLAAKNGVRIDRAKFKALCGIGQVAGKRVLL 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KPQT+MNLSGE+ A +YKLP+ RVLV DD+ LP G LR+R G GGHNG+KS++
Sbjct: 80 LKPQTFMNLSGEAVAAAAHFYKLPVERVLVLFDDISLPVGKLRVRRKGSAGGHNGIKSII 139
Query: 136 NNFR---------GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
G+G +P D +++L KF+ R +L E ++ L+ G+
Sbjct: 140 GECGSDGFPRVKIGVGDKPRPDYDLASWVLGKFSEAERPVFAQSLDRAAEAVEELIQNGV 199
Query: 186 TESARHFNT 194
+ +N+
Sbjct: 200 GSAMNLYNS 208
>gi|452972534|gb|EME72364.1| peptidyl-tRNA hydrolase [Bacillus sonorensis L12]
Length = 188
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+F GLGNPG Y+ TRHNVGF ID ++ I+++ +G GFV VLL KP
Sbjct: 3 VFAGLGNPGKTYEKTRHNVGFMTIDELSKEWNIALDKTKFNGQYGIGFVSGRKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY++P+ + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLLDYYEIPIENLKVIYDDLDLPAGKIRLRVKGSAGGHNGIKSMIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F A I A+Q+ V+ + L K E
Sbjct: 123 TSDFHRIRIGIGRPVNGMKIVDYVLGAFTADEEPAIQEAVQKTVKACEASLEKPFLEVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 EFNA 186
>gi|170759071|ref|YP_001788880.1| peptidyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
gi|238688504|sp|B1KTE2.1|PTH_CLOBM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169406060|gb|ACA54471.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
Length = 189
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP
Sbjct: 2 YLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P + ++L KF+ RE I+ L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDENV--VNYVLGKFSKDQREVIEKVLAMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|168183620|ref|ZP_02618284.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|237797001|ref|YP_002864553.1| peptidyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
gi|259535145|sp|C3KW96.1|PTH_CLOB6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182673238|gb|EDT85199.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|229262516|gb|ACQ53549.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
Length = 189
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +YK TRHN+GF+++D AE I +N K ++G+G +G+ ++L KP
Sbjct: 2 YLVVGLGNIGKEYKQTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 62 STYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P + ++L KF+ RE I+ L + ++ G+TE+
Sbjct: 122 NSDIFPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTEAM 179
Query: 190 RHFNTIQ 196
+N ++
Sbjct: 180 NKYNGVK 186
>gi|334338784|ref|YP_004543764.1| peptidyl-tRNA hydrolase [Desulfotomaculum ruminis DSM 2154]
gi|334090138|gb|AEG58478.1| peptidyl-tRNA hydrolase [Desulfotomaculum ruminis DSM 2154]
Length = 187
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 110/186 (59%), Gaps = 13/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GF +IDA A G ++ KA GQ +G V+LAKPQ
Sbjct: 3 LIVGLGNPGGQYAQTRHNIGFMVIDALARELGATVEKNQHKALVGQVNIGSEKVILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
TYMNLSG++ L +YKL +LV DDM LP G LR+R NGG GG GLKS+M+
Sbjct: 63 TYMNLSGQAVVALMNWYKLLPEDLLVISDDMDLPPGRLRIRMNGGAGGQKGLKSIMDLTG 122
Query: 137 --NFR----GIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+F GIGRP G +D +L KF+ ++I A++ V+ K+ + +G E+
Sbjct: 123 TQDFSRMRVGIGRPEHGAVD---HVLGKFDDQELQQIQPAIEAAVKAAKIWVLEGPVEAM 179
Query: 190 RHFNTI 195
+N +
Sbjct: 180 NQYNRV 185
>gi|145222528|ref|YP_001133206.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315442976|ref|YP_004075855.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum Spyr1]
gi|189038156|sp|A4T6N5.1|PTH_MYCGI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145215014|gb|ABP44418.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315261279|gb|ADT98020.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum Spyr1]
Length = 192
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 15/196 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG +Y TRHN+GF + D A+ G + VH K A G + P
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHNIGFMVADVLADRMGETFK-VHKKSGAEVTTGRLAGRP 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRVYMNESGRQVGPLAKFYSIAPTDVVIIHDELDIDFGRIRLKAGGGVAGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N+F+ GIGRPPGQ +F+L+ FN+ R + T +++ + +LL+
Sbjct: 120 SVGSALSTNDFQRVRVGIGRPPGQKSGASFVLEPFNSRERPELGTIIEQAADATELLIEL 179
Query: 184 GLTESARHFNTIQKYK 199
G+ E A+ NT+ +
Sbjct: 180 GI-EPAQ--NTVHAWS 192
>gi|256003232|ref|ZP_05428224.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281418468|ref|ZP_06249487.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|385777599|ref|YP_005686764.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
gi|419722854|ref|ZP_14249991.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum AD2]
gi|419726354|ref|ZP_14253377.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum YS]
gi|255992923|gb|EEU03013.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281407552|gb|EFB37811.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|316939279|gb|ADU73313.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
gi|380770406|gb|EIC04303.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum YS]
gi|380781234|gb|EIC10895.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum AD2]
Length = 189
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 114/184 (61%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHNVGF+ ++ ++ I + + KA G G +G V+LAKP
Sbjct: 5 FVIVGLGNPGAKYENTRHNVGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YK+P+ +++ +DD+ LP G LRLR G G HNG++SV+
Sbjct: 65 QTFMNLSGESVREIVEWYKIPVKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIYQL 124
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GI +PP D +++L +F+A R++ID A+++ + ++ +L G+ +
Sbjct: 125 QSEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDSAM 184
Query: 190 RHFN 193
+N
Sbjct: 185 NKYN 188
>gi|266619806|ref|ZP_06112741.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
gi|288868592|gb|EFD00891.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
Length = 192
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 109/188 (57%), Gaps = 9/188 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNP +Y+ TRHNVGFE ID A+ G ++ KA +G+G++G V+LAKP
Sbjct: 2 YLIAGLGNPTREYEKTRHNVGFEAIDILADKAGTTVTEKKHKALYGKGYIGGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES +A +YK+ +++ DD+ L G LR+R G GGHNGLK+++++
Sbjct: 62 QTYMNLSGESIREIADFYKIEPENIIILCDDINLSEGQLRIRLKGSAGGHNGLKNIISHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P MD ++L +F + ++ A ++ + +++ +G +
Sbjct: 122 GTQEFPRIRIGVGEKPRGMDLADYVLGRFPKEQQAVMEEAYRDAADAACMMIEEGADAAM 181
Query: 190 RHFNTIQK 197
H+N K
Sbjct: 182 NHYNRKHK 189
>gi|433543189|ref|ZP_20499601.1| peptidyl-tRNA hydrolase [Brevibacillus agri BAB-2500]
gi|432185548|gb|ELK43037.1| peptidyl-tRNA hydrolase [Brevibacillus agri BAB-2500]
Length = 189
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 103/187 (55%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G V VLL KPQ
Sbjct: 3 VIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVAQNKFRALVGEGRVEGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES + +YKL + ++V DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGESVAEVLKFYKLTPDELVVIFDDLDLPTGQLRLREKGSAGGHNGIKSMIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP ++LQ F A R +I A+ + + + +
Sbjct: 123 TQEFKRIKVGIGRPEPGRSVSDYVLQSFPAAERPQIQEAVGHAADAAAMWTREPFIKVMN 182
Query: 191 HFNTIQK 197
HFN++QK
Sbjct: 183 HFNSLQK 189
>gi|399046082|ref|ZP_10738619.1| peptidyl-tRNA hydrolase [Brevibacillus sp. CF112]
gi|398055867|gb|EJL47917.1| peptidyl-tRNA hydrolase [Brevibacillus sp. CF112]
Length = 191
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 103/187 (55%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G V VLL KPQ
Sbjct: 5 VIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVAQNKFRALVGEGRVEGEKVLLVKPQ 64
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES + +YKL + ++V DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 65 TYMNLSGESVAEVLKFYKLTPDELVVIFDDLDLPTGQLRLREKGSAGGHNGIKSMIQHLG 124
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP ++LQ F A R +I A+ + + + +
Sbjct: 125 TQEFKRIKVGIGRPEPGRSVSDYVLQSFPAAERPQIQEAVGHAADAAAMWTREPFIKVMN 184
Query: 191 HFNTIQK 197
HFN++QK
Sbjct: 185 HFNSLQK 191
>gi|392946237|ref|ZP_10311879.1| peptidyl-tRNA hydrolase [Frankia sp. QA3]
gi|392289531|gb|EIV95555.1| peptidyl-tRNA hydrolase [Frankia sp. QA3]
Length = 197
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 9/187 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG Y G RHN GF ++D AE G + + +A + + +LA+
Sbjct: 10 PWLVVGLGNPGPGYAGNRHNAGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGERAVLAR 69
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P ++MNLSG + +YK+ RV+V HD++ +P G +RL+ GG GHNGL+S+ +
Sbjct: 70 PLSFMNLSGGPVSAVRTFYKIDPARVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSISSA 129
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG++DP F+L+ F R + L+ + +++L++ GL +
Sbjct: 130 LGTRDYLRVRVGIGRPPGRLDPADFVLRDFGTAERRELPLLLEHAADSVEMLITDGLEPT 189
Query: 189 ARHFNTI 195
++ +
Sbjct: 190 QNRYHAL 196
>gi|239629011|ref|ZP_04672042.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239519157|gb|EEQ59023.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 216
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+ TRHNVGFE+ID A+ G ++ K +G+G +G VLL KP
Sbjct: 29 YIVAGLGNPTREYEKTRHNVGFEVIDVLADMLGTTVEEKKFKGCYGRGIIGGEKVLLLKP 88
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 89 QTFMNLSGESIRAAADFYKVDPEHIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL 148
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F+ R ++ A + + ++++++ G+ +
Sbjct: 149 GTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAAMEDAFKTAAKAVEVMITDGMDTAM 208
Query: 190 RHFN 193
FN
Sbjct: 209 NQFN 212
>gi|423438932|ref|ZP_17415913.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X12-1]
gi|401115420|gb|EJQ23272.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X12-1]
Length = 207
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 106/188 (56%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
+R L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L
Sbjct: 20 SRMKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVIL 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +
Sbjct: 80 LKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTI 139
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
++ GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 140 SHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFL 199
Query: 187 ESARHFNT 194
+ FN+
Sbjct: 200 QIMNTFNS 207
>gi|228956493|ref|ZP_04118290.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423632849|ref|ZP_17608594.1| peptidyl-tRNA hydrolase [Bacillus cereus VD154]
gi|228803183|gb|EEM50004.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401258893|gb|EJR65074.1| peptidyl-tRNA hydrolase [Bacillus cereus VD154]
Length = 207
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
R L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L
Sbjct: 20 TRMKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVIL 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +
Sbjct: 80 LKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTI 139
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
++ GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 140 SHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEITDVNHSIEKAADACEEWLNKPFL 199
Query: 187 ESARHFNT 194
+ FN+
Sbjct: 200 QIMNTFNS 207
>gi|423613678|ref|ZP_17589538.1| peptidyl-tRNA hydrolase [Bacillus cereus VD107]
gi|401241367|gb|EJR47758.1| peptidyl-tRNA hydrolase [Bacillus cereus VD107]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
R L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L
Sbjct: 20 TRMKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVIL 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +
Sbjct: 80 LKPLTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTI 139
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
++ GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 140 SHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIEKAADACEEWLNKPFL 199
Query: 187 ESARHFNT 194
+ FN+
Sbjct: 200 QIMNTFNS 207
>gi|365164150|ref|ZP_09360235.1| peptidyl-tRNA hydrolase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410723|ref|ZP_17387843.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3O-2]
gi|423433493|ref|ZP_17410497.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4O-1]
gi|363613165|gb|EHL64687.1| peptidyl-tRNA hydrolase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401109954|gb|EJQ17871.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3O-2]
gi|401111556|gb|EJQ19445.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4O-1]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
R L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L
Sbjct: 20 TRMKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVIL 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +
Sbjct: 80 LKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTI 139
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
++ GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 140 SHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIADVNHSIEKAADACEEWLNKPFL 199
Query: 187 ESARHFNT 194
+ FN+
Sbjct: 200 QIMNTFNS 207
>gi|383763137|ref|YP_005442119.1| peptidyl-tRNA hydrolase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383405|dbj|BAM00222.1| peptidyl-tRNA hydrolase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 193
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 15/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA----PVLL 75
+ VGLGNPG +Y RHN+GF+ I+ A+ GI+++ V +A G GFV VLL
Sbjct: 6 MIVGLGNPGPQYSRNRHNIGFQCIELCAQRWGIALDRVQMRAQTGSGFVMREGLRQKVLL 65
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP T+MN SGE+ PLA ++++ + +LV HDD+ LP G LRLR G GG NG++S++
Sbjct: 66 VKPLTFMNASGEAVAPLARFHRIDPSSILVIHDDLDLPAGKLRLRPGGSSGGQNGVRSII 125
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG-VEVLKLLLSKGL 185
+ GIGRPP MDP A++LQ F+ E I L+E VE L +G+
Sbjct: 126 EHLGTQEFARIRVGIGRPPHGMDPAAYVLQNFSE-EEEAIFAPLRERVVEAAACWLFEGI 184
Query: 186 TESARHFN 193
+ FN
Sbjct: 185 ERAMNRFN 192
>gi|301051787|ref|YP_003789998.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
gi|300373956|gb|ADK02860.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSKEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|229083370|ref|ZP_04215721.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
gi|228699935|gb|EEL52569.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
Length = 186
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ GIS+N K +G GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLNEQKFKGMYGSGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+ RP M ++L +F A ++ ++++ + + L K +
Sbjct: 123 TQEFQRIRMGVDRPKNGMKVVDYVLGRFTAEELPEVNASIEKAADACEEWLKKPFLQIMN 182
Query: 191 HFN 193
FN
Sbjct: 183 TFN 185
>gi|423513015|ref|ZP_17489545.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-1]
gi|402446363|gb|EJV78223.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-1]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP + ++L +F A ++ +++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGIKVVDYVLGRFTAEEISGVNQSIENAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|229159225|ref|ZP_04287250.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
gi|228624240|gb|EEK81041.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
Length = 186
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLARFTSEEIPDVNHSIEKAADACEEWLKKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|206977947|ref|ZP_03238834.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217957627|ref|YP_002336169.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218901253|ref|YP_002449087.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228912791|ref|ZP_04076439.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228925305|ref|ZP_04088402.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931554|ref|ZP_04094461.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983307|ref|ZP_04143521.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229119714|ref|ZP_04248976.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|229153830|ref|ZP_04281961.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|229194442|ref|ZP_04321246.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|384177957|ref|YP_005563719.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|423357805|ref|ZP_17335397.1| peptidyl-tRNA hydrolase [Bacillus cereus IS075]
gi|423554015|ref|ZP_17530341.1| peptidyl-tRNA hydrolase [Bacillus cereus ISP3191]
gi|423572002|ref|ZP_17548218.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A12]
gi|423572806|ref|ZP_17548925.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-D12]
gi|423608124|ref|ZP_17584016.1| peptidyl-tRNA hydrolase [Bacillus cereus VD102]
gi|206743853|gb|EDZ55273.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217064082|gb|ACJ78332.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218535325|gb|ACK87723.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228589032|gb|EEK47046.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|228629634|gb|EEK86330.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|228663739|gb|EEL19317.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|228776421|gb|EEM24773.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828106|gb|EEM73833.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834352|gb|EEM79892.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846851|gb|EEM91855.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|324324041|gb|ADY19301.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401073986|gb|EJP82394.1| peptidyl-tRNA hydrolase [Bacillus cereus IS075]
gi|401182096|gb|EJQ89238.1| peptidyl-tRNA hydrolase [Bacillus cereus ISP3191]
gi|401199136|gb|EJR06046.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A12]
gi|401216730|gb|EJR23436.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-D12]
gi|401238621|gb|EJR45057.1| peptidyl-tRNA hydrolase [Bacillus cereus VD102]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|403238486|ref|ZP_10917072.1| peptidyl-tRNA hydrolase [Bacillus sp. 10403023]
Length = 187
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHNVGF++ID +E I ++ +GQG V VLL KP
Sbjct: 3 LIVGLGNPGRQYEETRHNVGFKVIDELSEQLHIPLDKAKFNGVYGQGIVNGEKVLLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YY + + +LV +D++ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGESIRPLMDYYDILVEDILVVYDELDLPVGKIRLREKGSAGGHNGMKSIIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F A + I +A+Q + +S +
Sbjct: 123 TQEFKRIRIGISRPTNGMKIADYVLGRFQAEEVQDIKSAVQNSAVAAEKWVSAPFLQVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 EFNA 186
>gi|374294798|ref|YP_005044989.1| peptidyl-tRNA hydrolase [Clostridium clariflavum DSM 19732]
gi|359824292|gb|AEV67065.1| peptidyl-tRNA hydrolase [Clostridium clariflavum DSM 19732]
Length = 203
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 115/192 (59%), Gaps = 9/192 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 71
C + + +GLGNPG +Y+ TRHNVGF+ ID ++ I++ V KA G G +G
Sbjct: 11 CNILENLSVVIGLGNPGPRYENTRHNVGFDTIDRLSKKHNIAVTKVKYKAVIGDGNIGGH 70
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
VLL KPQT+MNLSGES + +YK+P+ +++ +DD+ LP G +R+R G G HNG+
Sbjct: 71 RVLLVKPQTFMNLSGESVREIIEWYKVPVKNIIIIYDDIDLPVGKIRIRPKGSAGTHNGM 130
Query: 132 KSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+SV+ + GI +PP + F+L KF+A R+ ++ A++ + ++++L+
Sbjct: 131 RSVIYQIQSEDFPRIRIGIDKPPQGWELADFVLSKFSADERKSVEEAIENAADAVEVILN 190
Query: 183 KGLTESARHFNT 194
G+ ++ +N
Sbjct: 191 SGIDKAMNRYNN 202
>gi|229015454|ref|ZP_04172455.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
gi|229021659|ref|ZP_04178246.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228739662|gb|EEL90071.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228745838|gb|EEL95839.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
Length = 190
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 9/189 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 74
V R L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+
Sbjct: 2 VQRMKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVI 61
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS
Sbjct: 62 LLKPLTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKST 121
Query: 135 MNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+++ GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 122 ISHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEELPGVNQSIEKTADACEEWLNKPF 181
Query: 186 TESARHFNT 194
+ FN+
Sbjct: 182 LQIMNTFNS 190
>gi|218895187|ref|YP_002443598.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228963151|ref|ZP_04124321.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|423364614|ref|ZP_17342083.1| peptidyl-tRNA hydrolase [Bacillus cereus VD022]
gi|423565591|ref|ZP_17541866.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A1]
gi|218543107|gb|ACK95501.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228796536|gb|EEM43974.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401072726|gb|EJP81188.1| peptidyl-tRNA hydrolase [Bacillus cereus VD022]
gi|401193668|gb|EJR00672.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A1]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS++++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|78043715|ref|YP_359068.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
gi|85681884|sp|Q9F8Q3.2|PTH_CARHZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77995830|gb|ABB14729.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
Length = 187
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSG + ++YKLPL+R++V +DD+ LP G +RLR G GGH G+ S+++
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISCL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGR P D K ++LQ F RE ++ L+ E + + L++G ++
Sbjct: 122 GSEEIPRLKIGIGR-PAVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAM 180
Query: 190 RHFN 193
FN
Sbjct: 181 TDFN 184
>gi|423618766|ref|ZP_17594599.1| peptidyl-tRNA hydrolase [Bacillus cereus VD115]
gi|401252608|gb|EJR58864.1| peptidyl-tRNA hydrolase [Bacillus cereus VD115]
Length = 207
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ ++ +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVDDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEGWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|423520644|ref|ZP_17497117.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA4-10]
gi|401180540|gb|EJQ87698.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA4-10]
Length = 186
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ +++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|218232965|ref|YP_002364901.1| peptidyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228898805|ref|ZP_04063088.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|228905848|ref|ZP_04069746.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228919002|ref|ZP_04082382.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950600|ref|ZP_04112735.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229039957|ref|ZP_04189721.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|229067816|ref|ZP_04201134.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|229077330|ref|ZP_04210007.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|229107738|ref|ZP_04237375.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|229125569|ref|ZP_04254602.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|229142857|ref|ZP_04271300.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|229148461|ref|ZP_04276718.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|229176652|ref|ZP_04304057.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|229188337|ref|ZP_04315386.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|296500884|ref|YP_003662584.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|423427604|ref|ZP_17404635.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-2]
gi|423506593|ref|ZP_17483182.1| peptidyl-tRNA hydrolase [Bacillus cereus HD73]
gi|423583701|ref|ZP_17559812.1| peptidyl-tRNA hydrolase [Bacillus cereus VD014]
gi|423589350|ref|ZP_17565436.1| peptidyl-tRNA hydrolase [Bacillus cereus VD045]
gi|423633618|ref|ZP_17609271.1| peptidyl-tRNA hydrolase [Bacillus cereus VD156]
gi|423644688|ref|ZP_17620305.1| peptidyl-tRNA hydrolase [Bacillus cereus VD166]
gi|423658446|ref|ZP_17633745.1| peptidyl-tRNA hydrolase [Bacillus cereus VD200]
gi|449086717|ref|YP_007419158.1| SpoVC [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|218160922|gb|ACK60914.1| aminoacyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228595136|gb|EEK52906.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|228606819|gb|EEK64235.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|228635003|gb|EEK91575.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|228640620|gb|EEK97007.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|228657886|gb|EEL13691.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|228675711|gb|EEL30918.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|228705986|gb|EEL58297.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|228715300|gb|EEL67158.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|228727365|gb|EEL78558.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|228809075|gb|EEM55559.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228840651|gb|EEM85912.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228853788|gb|EEM98547.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228860830|gb|EEN05207.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|296321936|gb|ADH04864.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|401107999|gb|EJQ15935.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-2]
gi|401208333|gb|EJR15100.1| peptidyl-tRNA hydrolase [Bacillus cereus VD014]
gi|401224003|gb|EJR30563.1| peptidyl-tRNA hydrolase [Bacillus cereus VD045]
gi|401269472|gb|EJR75502.1| peptidyl-tRNA hydrolase [Bacillus cereus VD166]
gi|401283328|gb|EJR89223.1| peptidyl-tRNA hydrolase [Bacillus cereus VD156]
gi|401287779|gb|EJR93550.1| peptidyl-tRNA hydrolase [Bacillus cereus VD200]
gi|402447418|gb|EJV79270.1| peptidyl-tRNA hydrolase [Bacillus cereus HD73]
gi|449020474|gb|AGE75637.1| SpoVC [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 207
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|423399540|ref|ZP_17376736.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-1]
gi|423410232|ref|ZP_17387379.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-3]
gi|401643596|gb|EJS61292.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-1]
gi|401649041|gb|EJS66631.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-3]
Length = 207
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|167758783|ref|ZP_02430910.1| hypothetical protein CLOSCI_01125 [Clostridium scindens ATCC 35704]
gi|336421857|ref|ZP_08602012.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_57FAA]
gi|167663523|gb|EDS07653.1| aminoacyl-tRNA hydrolase [Clostridium scindens ATCC 35704]
gi|336009706|gb|EGN39697.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 194
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+GTRHN GF++ID A IS++ +A G+G + V+LAKP
Sbjct: 2 FIIAGLGNPTLQYEGTRHNAGFDVIDTLAGKYNISVDGRKNRALIGKGIIEGKKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES G L YYK+ + LV +DD+ L G LR+R G GGHNG+K+++++
Sbjct: 62 QTYMNLSGESLGGLVDYYKVDEESEFLVVYDDISLDVGQLRIRKKGSAGGHNGMKNIISH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L +F+ R ++ Q+ VE ++++L + E+
Sbjct: 122 LGTEVFPRIKVGVGEKPKKYDLADYVLSRFSKEERAIMEEGCQKAVEAVEMILRGEMEEA 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNKFN 186
>gi|30018322|ref|NP_829953.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|75759613|ref|ZP_00739699.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|29893862|gb|AAP07154.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|74492904|gb|EAO56034.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 210
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 27 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 86
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 87 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 146
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 147 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 206
Query: 191 HFNT 194
FN+
Sbjct: 207 TFNS 210
>gi|168187037|ref|ZP_02621672.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
gi|169295068|gb|EDS77201.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
Length = 190
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHNVGF+++D +E I +N K +G G + V+L KP
Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDIVDVISEKYNIDLNKKKFKGMYGSGIIAGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES +YK+P V+V +DD+ L G +R+R G GGHNG+K+++ +F
Sbjct: 62 LTYMNLSGESVKEAMDFYKIPNENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHF 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P Q D + +L KFN E + + + + ++ KG E+
Sbjct: 122 GSDVFPRIKVGVGQPI-QKDLVSHVLGKFNIEDVEILSKVFEAANDATESIIEKGTAEAM 180
Query: 190 RHFN 193
FN
Sbjct: 181 NKFN 184
>gi|423597225|ref|ZP_17573225.1| peptidyl-tRNA hydrolase [Bacillus cereus VD078]
gi|401239566|gb|EJR45991.1| peptidyl-tRNA hydrolase [Bacillus cereus VD078]
Length = 207
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP + ++L +F + ++ +++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFIQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|291518348|emb|CBK73569.1| peptidyl-tRNA hydrolase [Butyrivibrio fibrisolvens 16/4]
Length = 189
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 9/188 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNP KY GTRHNVGFE IDA ++ GI +N K G+G + V+LAKP
Sbjct: 2 YLIVGLGNPERKYDGTRHNVGFEAIDAISKKFGIEVNHKEHKGLVGKGIINGKKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
QTYMNLSGE PL YY++ P ++V DD+ L G +R+R G GGHNGLK+++
Sbjct: 62 QTYMNLSGECVLPLTDYYEIDPSTEMVVISDDVLLSTGNIRVRKKGSAGGHNGLKNIIAL 121
Query: 136 ---NNFRGIGRPPGQM---DPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N F I G+ D + +L +++ RER+D ++++ + ++L L L +
Sbjct: 122 IGSNEFPRIRVGVGECENGDMVSHVLGRYDKEDRERVDASMEKVIGAVELFLDGDLDSAM 181
Query: 190 RHFNTIQK 197
+N +K
Sbjct: 182 NKYNVKEK 189
>gi|402562857|ref|YP_006605581.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-771]
gi|401791509|gb|AFQ17548.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-771]
Length = 186
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|47569900|ref|ZP_00240567.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|52145164|ref|YP_081663.1| peptidyl-tRNA hydrolase [Bacillus cereus E33L]
gi|222093821|ref|YP_002527870.1| peptidyl-tRNA hydrolase [Bacillus cereus Q1]
gi|375282148|ref|YP_005102581.1| peptidyl-tRNA hydrolase [Bacillus cereus NC7401]
gi|402554362|ref|YP_006595633.1| peptidyl-tRNA hydrolase [Bacillus cereus FRI-35]
gi|68052912|sp|Q63HI2.1|PTH_BACCZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783851|sp|B9IZD4.1|PTH_BACCQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|47553434|gb|EAL11818.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|51978633|gb|AAU20183.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus E33L]
gi|221237868|gb|ACM10578.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus Q1]
gi|358350669|dbj|BAL15841.1| peptidyl-tRNA hydrolase [Bacillus cereus NC7401]
gi|401795572|gb|AFQ09431.1| peptidyl-tRNA hydrolase [Bacillus cereus FRI-35]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|42524124|ref|NP_969504.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus HD100]
gi|68052963|sp|Q6MJR3.1|PTH_BDEBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39576332|emb|CAE80497.1| pth [Bdellovibrio bacteriovorus HD100]
Length = 187
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +YK TRHN+GF +D E G KA Q + D PV+ KP
Sbjct: 2 WLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV---- 134
QTYMNLSGES PL +YK+PL R++V HD++ P ++++ N GHGGHNG+KS+
Sbjct: 62 QTYMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSISGLM 121
Query: 135 --MNNFR---GIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
M+ R G+GRP P ++L KF ++ L + + ++ ++ G+ ++
Sbjct: 122 GSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQKA 181
Query: 189 ARHFNT 194
+ FNT
Sbjct: 182 STKFNT 187
>gi|65317511|ref|ZP_00390470.1| COG0193: Peptidyl-tRNA hydrolase [Bacillus anthracis str. A2012]
gi|165872550|ref|ZP_02217182.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167635053|ref|ZP_02393370.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|167641506|ref|ZP_02399754.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|170688886|ref|ZP_02880088.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|170707529|ref|ZP_02897982.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|177655322|ref|ZP_02936851.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190568956|ref|ZP_03021857.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Tsiankovskii-I]
gi|196036361|ref|ZP_03103758.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196041774|ref|ZP_03109064.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|196047390|ref|ZP_03114603.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|225862104|ref|YP_002747482.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227812725|ref|YP_002812734.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228943858|ref|ZP_04106244.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229089183|ref|ZP_04220465.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|229182446|ref|ZP_04309698.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|229602955|ref|YP_002864703.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|254724192|ref|ZP_05185977.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A1055]
gi|300119146|ref|ZP_07056847.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|376264079|ref|YP_005116791.1| Peptidyl-tRNA hydrolase [Bacillus cereus F837/76]
gi|386733919|ref|YP_006207100.1| Peptidyl-tRNA hydrolase [Bacillus anthracis str. H9401]
gi|164711678|gb|EDR17223.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167510491|gb|EDR85889.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|167529527|gb|EDR92277.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|170127525|gb|EDS96399.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|170667110|gb|EDT17871.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|172080163|gb|EDT65256.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190559880|gb|EDV13864.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Tsiankovskii-I]
gi|195990991|gb|EDX54962.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196021792|gb|EDX60486.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|196027394|gb|EDX66011.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|225790416|gb|ACO30633.1| aminoacyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227002837|gb|ACP12580.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228601026|gb|EEK58594.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|228694146|gb|EEL47827.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|228815815|gb|EEM62050.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229267363|gb|ACQ49000.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|298723468|gb|EFI64209.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|364509879|gb|AEW53278.1| Peptidyl-tRNA hydrolase [Bacillus cereus F837/76]
gi|384383771|gb|AFH81432.1| Peptidyl-tRNA hydrolase [Bacillus anthracis str. H9401]
Length = 207
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|118475822|ref|YP_892973.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
gi|254682322|ref|ZP_05146183.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CNEVA-9066]
gi|254735453|ref|ZP_05193161.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254744645|ref|ZP_05202324.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Kruger B]
gi|254756350|ref|ZP_05208379.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Vollum]
gi|254762406|ref|ZP_05214248.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Australia 94]
gi|118415047|gb|ABK83466.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
Length = 210
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 27 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 86
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 87 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 146
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 147 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 206
Query: 191 HFNT 194
FN+
Sbjct: 207 TFNS 210
>gi|434378694|ref|YP_006613338.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-789]
gi|38372414|sp|Q81J96.2|PTH_BACCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|401877251|gb|AFQ29418.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-789]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|325265260|ref|ZP_08131985.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
gi|324029439|gb|EGB90729.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
Length = 192
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 110/189 (58%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+GTRHNVGFE+ID A I+++T +A G+G +G V+LAKP
Sbjct: 2 YIIAGLGNPDRQYEGTRHNVGFEVIDTIASKYNIAVDTKKHRAFIGKGVIGGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ + ++V +DD+ L G LR+R G GGHNG+K+++++
Sbjct: 62 QTYMNLSGESIISLVEYYKIDEEQELIVIYDDVSLGVGQLRIRAKGSAGGHNGIKNIISH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L F E ++ + V +++++S + +
Sbjct: 122 LGSEVFPRIKVGVGEKPPKYDLADYVLGHFTKAEHELMEAGYENAVHAVEMIISGEIQAA 181
Query: 189 ARHFNTIQK 197
+N +K
Sbjct: 182 MNEYNRKKK 190
>gi|375087627|ref|ZP_09733973.1| peptidyl-tRNA hydrolase [Dolosigranulum pigrum ATCC 51524]
gi|374563903|gb|EHR35207.1| peptidyl-tRNA hydrolase [Dolosigranulum pigrum ATCC 51524]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 9/169 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG KY+GT+HN+GF ID A GI++N ++T+G+ +G V+L KPQ
Sbjct: 3 LIIGLGNPGKKYEGTKHNIGFITIDELAHQLGITLNKSKFESTYGEARIGTEKVILIKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG S P YY L + VLV +DD+ LP G +RLR GG GGHNG+KS++N
Sbjct: 63 TFMNNSGRSVRPWLDYYDLSTDDVLVIYDDLDLPVGKVRLREAGGSGGHNGIKSIINYLS 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
GIGRP + + ++ F + + A++ V+ +
Sbjct: 123 SKTFNRIKIGIGRPYAEQTVISHVMSTFPKETHDDMLVAVRSAVDATRF 171
>gi|220932953|ref|YP_002509861.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
gi|219994263|gb|ACL70866.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
Length = 187
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGI-SMNTVHCKATFGQGFVGDAPVLLAK 77
+L VGLGNPGDKY TRHN+GF++I+ A I + N +A G+G + V+LA+
Sbjct: 2 YLVVGLGNPGDKYAETRHNIGFQVIERLARKHKIKAKNYPKFEALCGRGMIRGQKVMLAQ 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMN SG + + YY L+ +++ +DD+ LP G +R+R G GGHNG+KS++N
Sbjct: 62 PLTYMNNSGRAVRKIIDYYDFSLDNIIIIYDDLDLPPGKIRIRKKGSSGGHNGVKSIINC 121
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPP ++ ++L F++ E + L VE ++ +L KGL ++
Sbjct: 122 LDTREFPRIRIGIGRPPAGVNVVDYVLGYFSSEDSEVMSDVLDTTVEAVETILEKGLEQA 181
Query: 189 ARHFNT 194
FN+
Sbjct: 182 MNIFNS 187
>gi|229170902|ref|ZP_04298505.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|423399629|ref|ZP_17376802.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-2]
gi|423461686|ref|ZP_17438482.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X2-1]
gi|423480173|ref|ZP_17456885.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-1]
gi|228612568|gb|EEK69787.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|401135348|gb|EJQ42947.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X2-1]
gi|401658235|gb|EJS75732.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-2]
gi|402423676|gb|EJV55882.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-1]
Length = 207
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGIFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + + ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVSHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|357053332|ref|ZP_09114428.1| peptidyl-tRNA hydrolase [Clostridium clostridioforme 2_1_49FAA]
gi|355385807|gb|EHG32855.1| peptidyl-tRNA hydrolase [Clostridium clostridioforme 2_1_49FAA]
Length = 216
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+ TRHNVGFE+ID A+ G ++ K +G+G +G VLL KP
Sbjct: 29 YIIAGLGNPTREYEKTRHNVGFEVIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLKP 88
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 89 QTFMNLSGESVRAAADFYKVDPEHIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL 148
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F+ R ++ A +E +++++ +G +
Sbjct: 149 GTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAVMEDAFREAAGAVEMMIIQGADAAM 208
Query: 190 RHFN 193
FN
Sbjct: 209 NQFN 212
>gi|229009561|ref|ZP_04166788.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|229053898|ref|ZP_04195333.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|229165040|ref|ZP_04292836.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|423490666|ref|ZP_17467348.1| peptidyl-tRNA hydrolase [Bacillus cereus BtB2-4]
gi|423496406|ref|ZP_17473050.1| peptidyl-tRNA hydrolase [Bacillus cereus CER057]
gi|423496800|ref|ZP_17473417.1| peptidyl-tRNA hydrolase [Bacillus cereus CER074]
gi|423595306|ref|ZP_17571336.1| peptidyl-tRNA hydrolase [Bacillus cereus VD048]
gi|423659630|ref|ZP_17634799.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM022]
gi|423671082|ref|ZP_17646111.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM034]
gi|423672695|ref|ZP_17647634.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM062]
gi|228618425|gb|EEK75454.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|228721439|gb|EEL72959.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|228751705|gb|EEM01504.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|401149136|gb|EJQ56615.1| peptidyl-tRNA hydrolase [Bacillus cereus CER057]
gi|401163981|gb|EJQ71321.1| peptidyl-tRNA hydrolase [Bacillus cereus CER074]
gi|401222232|gb|EJR28829.1| peptidyl-tRNA hydrolase [Bacillus cereus VD048]
gi|401293913|gb|EJR99546.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM034]
gi|401304649|gb|EJS10199.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM022]
gi|401311427|gb|EJS16728.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM062]
gi|402429011|gb|EJV61102.1| peptidyl-tRNA hydrolase [Bacillus cereus BtB2-4]
Length = 207
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP + ++L +F + ++ +++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|42779130|ref|NP_976377.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
gi|42735045|gb|AAS38985.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
Length = 210
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 27 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 86
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 87 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 146
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 147 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQIMN 206
Query: 191 HFNT 194
FN+
Sbjct: 207 TFNS 210
>gi|295093546|emb|CBK82637.1| peptidyl-tRNA hydrolase [Coprococcus sp. ART55/1]
Length = 185
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY GTRHNVGF ++D AE I ++T KA G+G + V+LA PQ
Sbjct: 3 IIVGLGNPGAKYAGTRHNVGFAVLDELAERHNIRIDTAKHKALIGKGIIDGEKVILAMPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSGES + +YK + ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 63 TFMNLSGESVRAIMDFYKCTVEDLIVVYDDIDLDVGKLRIRQKGSAGGHNGMKNIIQHVG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G+ P MD ++L +F I + + ++ +L+ G +
Sbjct: 123 SQEFVRIRVGVGKKPDHMDLADYVLSRFGKEDLANIRESCGNACDAVETILADGTVAAMN 182
Query: 191 HFN 193
FN
Sbjct: 183 KFN 185
>gi|403386102|ref|ZP_10928159.1| peptidyl-tRNA hydrolase [Kurthia sp. JC30]
Length = 188
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LF+GLGNPG +Y+ TRHNVGF+ IDA A I +N A +G + V+L KP
Sbjct: 3 LFIGLGNPGKQYEHTRHNVGFDTIDALANKWSIDLNQTKFNAVYGMSHRPEGKVILMKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE+ PL YY + + ++V +DDM + LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGEAVRPLMDYYDIDIEDIVVIYDDMDIDQASLRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
NF GIGRPP M ++L F+ + A ++ + + K E
Sbjct: 123 TQNFNRLRVGIGRPPQGMKVPDYVLSHFSKEDWADMQAAYEKAADACEYFTQKPYAEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 KFN 185
>gi|225575739|ref|ZP_03784349.1| hypothetical protein RUMHYD_03832 [Blautia hydrogenotrophica DSM
10507]
gi|225037036|gb|EEG47282.1| aminoacyl-tRNA hydrolase [Blautia hydrogenotrophica DSM 10507]
Length = 194
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 10/188 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG +Y+ TRHN+GF+ +D E + + V CK +G+G + V+L KP
Sbjct: 2 YLIAGLGNPGRQYEHTRHNIGFDTVDVLVEEYQVPQSGVRCKGMYGKGMIAGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
TYMNLSGES +A Y+K+ P ++++V +DD+ L G +R+R G GGHNG+K ++
Sbjct: 62 LTYMNLSGESVRGIADYFKIDPESQLIVIYDDIDLEPGQIRIRKKGSAGGHNGIKDIIAK 121
Query: 136 ---NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF G+G P D +L +F+ RE ID A+ +K +L+ G+ +
Sbjct: 122 LGTQNFIRIKIGVGAKPRGWDLADHVLSRFSKEERELIDMAVSRAAAAVKKILTDGVDAA 181
Query: 189 ARHFNTIQ 196
+N Q
Sbjct: 182 MNEYNRKQ 189
>gi|206972605|ref|ZP_03233548.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
gi|206732507|gb|EDZ49686.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
Length = 207
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
R L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L
Sbjct: 20 TRMKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVIL 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +
Sbjct: 80 LKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTI 139
Query: 136 -----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
F+ GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 140 LHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIADVNHSIEKAADACEEWLNKPFL 199
Query: 187 ESARHFNT 194
+ FN+
Sbjct: 200 QIMNTFNS 207
>gi|304315713|ref|YP_003850858.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433653904|ref|YP_007297612.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777215|gb|ADL67774.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292093|gb|AGB17915.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 190
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 109/184 (59%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG +Y+GTRHN+GF++ID +E I++ + K+ G+G + V+L KP
Sbjct: 2 YIIVGLGNPGREYEGTRHNMGFDVIDDLSEKLNIAVKKLRFKSLIGEGIYKEEKVILQKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QTYMN SGE+ + +YKLPL+ ++V +DD L G +R+R G GGHNG+KS++
Sbjct: 62 QTYMNSSGEAVYDIVNFYKLPLSNLIVVYDDKDLDVGKIRIRKKGSSGGHNGMKSIIYLL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+F GIG+P G M +L +FN + +D ++ + + ++ G+ +
Sbjct: 122 NSEDFPRVRVGIGKPKGDM--IEHVLGRFNESDKTIVDNSIDRAADAIIDIIENGVEHAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 NLFN 183
>gi|126653273|ref|ZP_01725384.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
gi|126589947|gb|EAZ84076.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
Length = 186
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG Y+ TRHN+GF++IDA AE G + + + VLL KP
Sbjct: 3 IIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGAPLTNSKFNGMYTTVHRPEGKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE GPL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGECVGPLMDYFDIDVEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++L KF+ + + A+++ V +++ LSK +
Sbjct: 123 TQEFNRIRVGISRPPAGMKVADYVLAKFSKEDQVYMKEAIEKSVNAVEVSLSKPFLDVMN 182
Query: 191 HFN 193
HFN
Sbjct: 183 HFN 185
>gi|383819051|ref|ZP_09974330.1| peptidyl-tRNA hydrolase [Mycobacterium phlei RIVM601174]
gi|383337847|gb|EID16222.1| peptidyl-tRNA hydrolase [Mycobacterium phlei RIVM601174]
Length = 192
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG +Y TRHN+GF + D A+ G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGAQYATTRHNLGFLVADILADRIG-SGFKVHKKSGAEVVTGRLAGRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+TYMN SG GPLA +Y +P V+V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRTYMNESGRQVGPLAKFYSVPPADVIVIHDELDIDFGRIRLKFGGGIAGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N+F GIG+PPG+M+ F+L F A + + T Q+ + ++LL+S+
Sbjct: 120 SVGAALGTNDFHRVRVGIGKPPGRMEGAKFVLSTFTAAEWKEVPTICQQAADAVELLISQ 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|423370760|ref|ZP_17348164.1| peptidyl-tRNA hydrolase [Bacillus cereus VD142]
gi|401073347|gb|EJP81772.1| peptidyl-tRNA hydrolase [Bacillus cereus VD142]
Length = 207
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGRLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP + ++L +F + ++ +++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|336176810|ref|YP_004582185.1| peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
gi|334857790|gb|AEH08264.1| Peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
Length = 203
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 105/186 (56%), Gaps = 9/186 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG Y G RHN+GF ++D AE T +A + + LLAK
Sbjct: 13 PWLVVGLGNPGPTYAGNRHNIGFMVLDLLAERVRDRFRTHRGRADVAEARLAGVRALLAK 72
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+++MN+SG L A++K+ + ++V HD++ +P G +RL+ GG GHNGL+SV
Sbjct: 73 PRSFMNVSGSPVEALRAFFKVDIGHIVVVHDELDIPFGTIRLKLGGGDNGHNGLRSVTAA 132
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+M+P F+L+ F+A R+ + + + ++ LL +GL +
Sbjct: 133 LGSRDYLRVRVGIGRPPGRMNPADFVLRDFSAPERKELPFLVDRAADAVESLLDRGLEVT 192
Query: 189 ARHFNT 194
F+
Sbjct: 193 QNTFHV 198
>gi|30260242|ref|NP_842619.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47525304|ref|YP_016653.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183085|ref|YP_026337.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49481760|ref|YP_034404.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|421510668|ref|ZP_15957557.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. UR-1]
gi|421640741|ref|ZP_16081319.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. BF1]
gi|38372419|sp|Q81VY9.1|PTH_BACAN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052958|sp|Q6HPW6.1|PTH_BACHK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|30253563|gb|AAP24105.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47500452|gb|AAT29128.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177012|gb|AAT52388.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49333316|gb|AAT63962.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|401819289|gb|EJT18470.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. UR-1]
gi|403392120|gb|EJY89378.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. BF1]
Length = 186
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|423388179|ref|ZP_17365405.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-3]
gi|401644369|gb|EJS62061.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-3]
Length = 186
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDIEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|339442232|ref|YP_004708237.1| hypothetical protein CXIVA_11690 [Clostridium sp. SY8519]
gi|338901633|dbj|BAK47135.1| hypothetical protein CXIVA_11690 [Clostridium sp. SY8519]
Length = 206
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNP +Y+ TRHN+GF+ +D A GI+MN C+A G G+ VLLAKP
Sbjct: 2 YLIAGLGNPTAQYEKTRHNIGFDAVDVLARKCGITMNRRQCQALTGTGYCEGQKVLLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
TYMNLSG S L YY+L P ++V +DD+ L G +R+R G GGHNG+K ++
Sbjct: 62 LTYMNLSGHSIRDLMRYYRLDPEQDLIVLYDDISLDPGSIRVRKKGSAGGHNGIKDIIAM 121
Query: 136 ---NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
++F G+G P D ++L + R++ D AL+E + + L+++ E+
Sbjct: 122 TGTSDFSRVRIGVGAKPRDWDLADYVLGRMQGEDRKQADQALEEAAQAVGLMITGRTDEA 181
Query: 189 ARHFNTIQK 197
FN +K
Sbjct: 182 MNRFNRKKK 190
>gi|355678112|ref|ZP_09060791.1| peptidyl-tRNA hydrolase [Clostridium citroniae WAL-17108]
gi|354812558|gb|EHE97173.1| peptidyl-tRNA hydrolase [Clostridium citroniae WAL-17108]
Length = 216
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 108/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+ TRHNVGFE+ID A+ G ++ K +G+G +G VLL KP
Sbjct: 29 YIIAGLGNPTREYEKTRHNVGFEVIDVLADMLGTTVEEKKFKGLYGRGIIGGEKVLLLKP 88
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 89 QTFMNLSGESVKAAADFYKVDHEHIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAHL 148
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F+ R ++ A ++ + + +++++ + +
Sbjct: 149 GTQEFSRIRVGVGDKPKKMDLADYVLSRFSKEDRVLMEDAFKDASKAVNVMITESVDAAM 208
Query: 190 RHFN 193
FN
Sbjct: 209 NQFN 212
>gi|423374895|ref|ZP_17352232.1| peptidyl-tRNA hydrolase [Bacillus cereus AND1407]
gi|401093377|gb|EJQ01478.1| peptidyl-tRNA hydrolase [Bacillus cereus AND1407]
Length = 207
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLHIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|228989259|ref|ZP_04149252.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
gi|229003057|ref|ZP_04160914.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228758215|gb|EEM07403.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228770469|gb|EEM19040.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
Length = 186
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ GIS++ K +G GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F A ++ ++++ + + L K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQIMN 182
Query: 191 HFN 193
FN
Sbjct: 183 TFN 185
>gi|68052974|sp|Q73FF7.2|PTH_BACC1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 186
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|271969794|ref|YP_003343990.1| aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
gi|270512969|gb|ACZ91247.1| Aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
Length = 201
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +Y G RHN GF ++D A G +A +G + AP +LAKP
Sbjct: 7 WLVVGLGNPGPEYAGNRHNAGFMVLDELAARAGGRFKVHRSRAEVLEGRLAGAPAVLAKP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
++MNLSG LA +YK+ RV+ HD++ +P G LR + GG GHNGLKS+ +
Sbjct: 67 LSFMNLSGGPVKALADFYKVDPARVIAVHDELDIPYGALRAKLGGGDNGHNGLKSITKSL 126
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPPG+MD A++L+ F R+ + + ++++ L++ GL +
Sbjct: 127 ATKDYLRVRFGIGRPPGRMDAAAYVLRDFATAERKDLPFLVDRAADMVESLITSGLEPTQ 186
Query: 190 RHFNT 194
F+
Sbjct: 187 NTFHA 191
>gi|229027898|ref|ZP_04184053.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
gi|228733412|gb|EEL84239.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
Length = 207
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + + ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVGHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|410461743|ref|ZP_11315388.1| peptidyl-tRNA hydrolase [Bacillus azotoformans LMG 9581]
gi|409925447|gb|EKN62660.1| peptidyl-tRNA hydrolase [Bacillus azotoformans LMG 9581]
Length = 187
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG Y+ TRHNVGF +ID G+S+N K +G G + V+L KP T
Sbjct: 4 IVGLGNPGKNYEKTRHNVGFMVIDELCRRWGLSLNKEKFKGIYGMGSINGEKVILLKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGES PL YY++ + ++V +DD+ LP G +RLR G GGHNG+KS +
Sbjct: 64 YMNLSGESIRPLLDYYEIDVEDLIVIYDDLDLPTGKIRLRTKGSAGGHNGIKSTIQHLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
NF GI RP M ++L F+A + I+ A+++ + + LS E
Sbjct: 124 QNFNRLRIGINRPVNGMKVPDYVLGVFSAEEQPEIEGAIKQAADACEKWLSHTFLEVMNE 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|423416555|ref|ZP_17393644.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-1]
gi|401110209|gb|EJQ18120.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-1]
Length = 186
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQIMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 TFNS 186
>gi|423651372|ref|ZP_17626942.1| peptidyl-tRNA hydrolase [Bacillus cereus VD169]
gi|401278424|gb|EJR84357.1| peptidyl-tRNA hydrolase [Bacillus cereus VD169]
Length = 207
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP + ++L +F + ++ ++++ + + L+K +
Sbjct: 144 TQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQIMN 203
Query: 191 HFNT 194
FN+
Sbjct: 204 TFNS 207
>gi|294629796|ref|ZP_06708356.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
gi|292833129|gb|EFF91478.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
Length = 203
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
++ + PWL VGLGNPG +Y RHNVGF + D A+ G +A +G +G
Sbjct: 7 VSSASDPWLIVGLGNPGPEYAMNRHNVGFMVADLLADRMGGRFKRAGKAQAQVVEGRIGP 66
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
V+LAKP +YMNLSG L +YK+PL+ V+ HD++ + GVLRL+ GG
Sbjct: 67 PGPASRRVVLAKPMSYMNLSGGPVNALRDFYKVPLDHVVAVHDELDIDYGVLRLKRGGGD 126
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ GIGRPPG+M F+L+ F++ R+ +D + + +
Sbjct: 127 NGHNGLKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAV 186
Query: 178 KLLLSKGLTESARHFNT 194
+ LL++GL + +N+
Sbjct: 187 ECLLAEGLERAQSAYNS 203
>gi|453049720|gb|EME97295.1| peptidyl-tRNA hydrolase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 198
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 15/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP----- 72
PWL VGLGNPG +Y G RHNVGF + D AE G +A +G +G AP
Sbjct: 9 PWLIVGLGNPGGEYAGNRHNVGFMVADLLAERIGAKFKAHKARAQVVEGRLG-APGPSSR 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V++AKP ++MNLSG T L +YK+P+ R++ HD++ + G LRL+ GG GHNGL
Sbjct: 68 RVVVAKPMSFMNLSGGPTAALRDFYKVPVGRIVAVHDELDIDFGQLRLKLGGGDNGHNGL 127
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F+A R+ + + + ++ L+
Sbjct: 128 KSITKALGSDYCRVRFGIGRPPGRMQVADFVLKDFSAAERKDLAFEVDRAADAVESLIVD 187
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 188 GLERAQGTYNS 198
>gi|456012107|gb|EMF45824.1| Peptidyl-tRNA hydrolase [Planococcus halocryophilus Or1]
Length = 187
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG Y+ TRHN+GF++ID A + K + + V+L KP
Sbjct: 3 LIIGLGNPGKAYEDTRHNIGFKVIDYLASQWNAPLTQSKFKGMYSVSHRPEGKVMLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES G L YY + L ++V +DD+ LP G LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGESVGALMDYYNIDLKDIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++LQ+F+ + A+++ + LSK E
Sbjct: 123 NLEFNRLRIGISRPPAGMKVPDYVLQRFSKEEIPEMTAAIKKSAAACETWLSKPYVEVMN 182
Query: 191 HFNTI 195
FN I
Sbjct: 183 EFNGI 187
>gi|210623287|ref|ZP_03293704.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
gi|210153688|gb|EEA84694.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
Length = 186
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY TRHN GFE+ID A+ GIS+ + KA G+G VG V+L KP
Sbjct: 2 YIIVGLGNPGQKYAKTRHNAGFEVIDRLADEYGISVTKIKHKALIGEGRVGTEKVVLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
TYMNLSGES L +YK L++++V +DD+ L G LR+R G G HNG++S+
Sbjct: 62 TTYMNLSGESVVSLYQFYKPDLDKLIVIYDDIDLDVGKLRIRKKGSPGTHNGMRSITQCL 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR G+G+P D F+L + E ++ ++ + + ++ +G+ +
Sbjct: 122 GTKDFPRFRVGVGKPDKGRDLADFVLSRVPKEQDEAMNEGFEKTAKAIDSMIREGIDMAM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|392417978|ref|YP_006454583.1| peptidyl-tRNA hydrolase [Mycobacterium chubuense NBB4]
gi|390617754|gb|AFM18904.1| peptidyl-tRNA hydrolase [Mycobacterium chubuense NBB4]
Length = 192
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 117/195 (60%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG +Y TRHN+GF + D A+ G + VH K A G +G
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHNLGFLVADVLADRIGAAFK-VHKKSGAEVVTGRLGGKS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+TYMN SG GPLA +Y + ++V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRTYMNESGRQVGPLAKFYSVAPADIIVIHDELDIDFGRIRLKSGGGVAGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N+F+ GIGRPPG+ +F+L+ FN+ R + T +++ + +LL++
Sbjct: 120 SVGSALGSNDFQRVRIGIGRPPGRQSGASFVLENFNSRERPELGTIVEQAADATELLIAH 179
Query: 184 GLTESARHFNTIQKY 198
G+ E A+ NT+ +
Sbjct: 180 GI-EPAQ--NTVHAW 191
>gi|228995442|ref|ZP_04155112.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
gi|228764303|gb|EEM13180.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
Length = 186
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ GIS++ K +G GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 63 TYMNLSGESIRPLMDYYKIGVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F A ++ ++++ + + L K +
Sbjct: 123 TQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQIMN 182
Query: 191 HFN 193
FN
Sbjct: 183 TFN 185
>gi|302669663|ref|YP_003829623.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
gi|302394136|gb|ADL33041.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
Length = 226
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 108/191 (56%), Gaps = 10/191 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+ ++ GLGNP KY GTRHNVGF IDA ++ GI + KA FG+G +G+ V+L
Sbjct: 33 KMYIIAGLGNPEKKYFGTRHNVGFATIDALSDKYGIELTETKFKAAFGKGRIGNDRVILV 92
Query: 77 KPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSGE+ P+ Y+K+ ++V DD+ L G +R+R G GGHNGLKS++
Sbjct: 93 KPLTYMNLSGEAIRPICDYFKVDSKEELIVISDDVELDVGNIRVRPKGSAGGHNGLKSII 152
Query: 136 --------NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
N R G+G+ P + D ++L F I + V ++ +++ G+
Sbjct: 153 AQLGHSEFNRVRVGVGKKPKEWDMVDWVLGTFQGEDAVSIKEGIDRAVAAVEEIMAAGVD 212
Query: 187 ESARHFNTIQK 197
+ +NTI+K
Sbjct: 213 SAMNKYNTIKK 223
>gi|294496924|ref|YP_003560624.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|384049328|ref|YP_005497345.1| peptidyl-tRNA hydrolase [Bacillus megaterium WSH-002]
gi|294346861|gb|ADE67190.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|345447019|gb|AEN92036.1| Peptidyl-tRNA hydrolase [Bacillus megaterium WSH-002]
Length = 185
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GF ID AE IS++ +G G + V+L KP
Sbjct: 3 LIVGLGNPGKEYDRTRHNIGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSGES PL Y+ + + +LV +DD+ LPCG +RLR G GGHNG+KS++ + +
Sbjct: 63 TYMNLSGESIRPLMDYFDIDVEDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQHLK 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F ++ A++ V + L K E
Sbjct: 123 TQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDEMVHMEEAMKTSVHASEDFLGKTFLEVMN 182
Query: 191 HFN 193
+N
Sbjct: 183 RYN 185
>gi|302534902|ref|ZP_07287244.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
gi|302443797|gb|EFL15613.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
Length = 197
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 108/192 (56%), Gaps = 13/192 (6%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG-----D 70
A PWL VGLGNPG +Y G RHN+GF + D AE G +A +G +G +
Sbjct: 6 AAPWLIVGLGNPGAEYAGNRHNIGFMVADLLAERIGGKFKAHKARAQVVEGRMGPPGPLN 65
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V++AKP ++MNLSG L +YK+PL R++ HD++ + LRL+ GG GHNG
Sbjct: 66 RRVVIAKPLSFMNLSGGPVTALRDFYKVPLERIVAVHDELDIDYATLRLKLGGGDNGHNG 125
Query: 131 LKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
LKS+ + GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 126 LKSMTKSMGADYHRVRCGIGRPPGRMQVADFVLRDFSSTERKELDWFVDRSADAVECLVQ 185
Query: 183 KGLTESARHFNT 194
+GL + +N+
Sbjct: 186 EGLERAQSAYNS 197
>gi|291087007|ref|ZP_06345123.2| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
gi|291076615|gb|EFE13979.1| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
Length = 202
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG+KY TRHN GF IDA A+ GI + KA G+G + V+LAKP
Sbjct: 5 YIIAGLGNPGEKYDNTRHNAGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES L YYK+ +++ DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 65 QTYMNLSGESIRALVDYYKVTQEELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIAHL 124
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F ++ + A + + ++++G +
Sbjct: 125 GTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADAAM 184
Query: 190 RHFN 193
+N
Sbjct: 185 NQYN 188
>gi|295090935|emb|CBK77042.1| peptidyl-tRNA hydrolase [Clostridium cf. saccharolyticum K10]
gi|295116084|emb|CBL36931.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SM4/1]
Length = 199
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG+KY TRHN GF IDA A+ GI + KA G+G + V+LAKP
Sbjct: 2 YIIAGLGNPGEKYDNTRHNAGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES L YYK+ +++ DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 62 QTYMNLSGESIRALVDYYKVTQEELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F ++ + A + + ++++G +
Sbjct: 122 GTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADAAM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NQYN 185
>gi|333977672|ref|YP_004515617.1| peptidyl-tRNA hydrolase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821153|gb|AEG13816.1| Peptidyl-tRNA hydrolase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 190
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +Y TRHNVGF ++D A I ++ V +A GQG V ++LAKP
Sbjct: 2 WLVVGLGNPGPEYARTRHNVGFMVVDRLARDLDIKIDRVFLRALVGQGQVAGQRLVLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
TYMN SGE+ L +YKL +++LV DD+ LP G LRLR +GG GGH GL+S++
Sbjct: 62 LTYMNRSGEAVAALLNWYKLTPSQLLVVSDDLDLPTGRLRLRKSGGDGGHRGLRSIIELV 121
Query: 137 ------NFR-GIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
R GIGRP G + ++L +F ++ A+ + + +++ L++GL +
Sbjct: 122 GSREFARLRVGIGRPSGPDCEVVDWVLSRFTEEEGPLMEKAVADASKAVQVALTRGLDAA 181
Query: 189 ARHFNT 194
FN
Sbjct: 182 MNLFNA 187
>gi|433460548|ref|ZP_20418177.1| peptidyl-tRNA hydrolase [Halobacillus sp. BAB-2008]
gi|432191390|gb|ELK48348.1| peptidyl-tRNA hydrolase [Halobacillus sp. BAB-2008]
Length = 187
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG KY+ TRHN+GF ++D AE G ++ F V V+L KPQT
Sbjct: 4 IVGLGNPGRKYEQTRHNIGFMIVDQLAEKNGWTLTQKKFNGLFTMERVDGEKVVLLKPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
YMNLSGES PL YY + + VLV +DD+ LP G +RLR GGHGGHNG++++++
Sbjct: 64 YMNLSGESLRPLMEYYDMDVEDVLVVYDDLDLPPGKIRLRQKGGHGGHNGIRNIIDQLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
G+GRP G +L F + ++ ++++ V+ + L++ E
Sbjct: 124 KEFKRLRVGVGRPNGSQTVIDHVLGDFYKEEWKAVEESIEQSVQACEAWLNQPFNEVMND 183
Query: 192 FNT 194
+N
Sbjct: 184 YNV 186
>gi|260584472|ref|ZP_05852219.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
gi|260157990|gb|EEW93059.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
Length = 186
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG KYKGTRHN+GF +D FA + + N ATF Q + V+L KP
Sbjct: 3 LIIGLGNPGAKYKGTRHNIGFITVDEFAYQEKLEFNQALFDATFTQTHIDGEKVILMKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSG++ PL Y+K+ + ++V +DDM LP G +RLR G GGHNG+KS++
Sbjct: 63 TYMNLSGQAVRPLMNYFKIGIEDIVVLYDDMDLPVGKIRLRQKGSAGGHNGIKSIISCLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
N + G+GRP +L F +E I +++ + VE L+
Sbjct: 123 SDQFNRIKIGVGRPAPGRSVVNHVLANFEKEEQEEILSSVSKSVEALR 170
>gi|150014977|ref|YP_001307231.1| peptidyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
gi|189038283|sp|A6LPJ5.1|PTH_CLOB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149901442|gb|ABR32275.1| Aminoacyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
Length = 191
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 102/173 (58%), Gaps = 15/173 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG++Y+ TRHN+GF++ID A+ I +N K +G+GF+ V+L KP
Sbjct: 2 FLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +Y L + +LV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 62 TTYMNLSGESVREVVDFYNLNNDEILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKF----NAIARERIDTALQEGVEVLK 178
G+G+P G D +L KF AI E I+ + + E++K
Sbjct: 122 NSEIFSRIKVGVGQPNG--DLVKHVLGKFTKEETAILSESIEASTKAAAEIIK 172
>gi|323691737|ref|ZP_08105997.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
gi|323504215|gb|EGB20017.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
Length = 202
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y G+RHNVGF +D A+ I + KA G+G + V+L KP
Sbjct: 2 YIIAGLGNPGKEYAGSRHNVGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES + YYK + +V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESIRSVMDYYKTEPSEFIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIAHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L F+ +ER++ A ++GV +++ G+ +
Sbjct: 122 GTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEKERMEQAFKDGVAAAVAMMNDGVDTAM 181
Query: 190 RHFN 193
FN
Sbjct: 182 NRFN 185
>gi|289422642|ref|ZP_06424483.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|429728199|ref|ZP_19262937.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius VPI 4330]
gi|289156942|gb|EFD05566.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|429150341|gb|EKX93261.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius VPI 4330]
Length = 186
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ +GLGNPG KY+ TRHN GF+++D A+ +S++ + KA G+ +G V+L KP
Sbjct: 2 YIIMGLGNPGKKYENTRHNAGFDVVDELAKRLNVSIDKIKHKALIGEARIGTEKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGE+ ++ +YK+ L++++V +DD+ L G LR+R G G HNG+KS++
Sbjct: 62 QTYMNLSGETAISISQFYKMDLDKLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIKCL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+ +P D F+L + + +D A+++ ++ ++ GL +
Sbjct: 122 GSQDFPRVRVGVSKPEPGRDLADFVLSRVPKDRQNDMDLAIEKAASTVEEIIRSGLDVAM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|163815684|ref|ZP_02207056.1| hypothetical protein COPEUT_01864 [Coprococcus eutactus ATCC 27759]
gi|158448989|gb|EDP25984.1| aminoacyl-tRNA hydrolase [Coprococcus eutactus ATCC 27759]
Length = 186
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY GTRHN GF +ID AE I ++T KA G+G + V+LA PQ
Sbjct: 3 LIVGLGNPGAKYAGTRHNAGFSVIDELAERHNIKVDTCKHKALIGKGVINGEKVILAMPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSGES + +YKL ++ ++V +DD+ L G +R+R G GGHNG+K+++
Sbjct: 63 TFMNLSGESVRAIMDFYKLTVDDLIVVYDDIDLDVGKIRIREKGSAGGHNGMKNIILHSG 122
Query: 136 -NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F G+G+ P MD +L +F+ + + + + L+++LS G +
Sbjct: 123 SQDFVRVRVGVGKKPEHMDLADHVLSRFSREDLPFMRESCGKACDALEVILSDGAVAAMN 182
Query: 191 HFN 193
+N
Sbjct: 183 RYN 185
>gi|296329555|ref|ZP_06872041.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672752|ref|YP_003864423.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153298|gb|EFG94161.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410995|gb|ADM36113.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 188
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLMDYYDVDNGDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L FN ID A+ + V+ + LSK E
Sbjct: 123 TSEFDRIRIGIGRPVNGMKVVDYVLGSFNKEEVPDIDGAIDKSVKACEASLSKPFLEVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 EFNA 186
>gi|317126793|ref|YP_004093075.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
gi|315471741|gb|ADU28344.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
Length = 204
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 105/198 (53%), Gaps = 10/198 (5%)
Query: 6 FLRRGFCTAVARPW-LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG 64
F R+G + A P L VGLGNPG KY GTRHNVGFE+ID + + ++ K +G
Sbjct: 7 FQRQGKTESEALPMKLVVGLGNPGSKYDGTRHNVGFEVIDRCQQLFQLDLDQSKFKGIYG 66
Query: 65 QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 124
+ + L KP T+MNLSGES PL Y+K+P +LV +DD+ L G +RLR GG
Sbjct: 67 YKVIEGEKIFLLKPLTFMNLSGESVIPLMKYFKIPTEDLLVIYDDLDLAPGKIRLRQKGG 126
Query: 125 HGGHNGLKSVM--------NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
GGHNG+KS++ N R GIGRPP ++L F+ R +D +++ +
Sbjct: 127 AGGHNGMKSIISHLGTEEFNRIRIGIGRPPKGYAVPDYVLGSFSNEERNAVDESIETAAK 186
Query: 176 VLKLLLSKGLTESARHFN 193
+ FN
Sbjct: 187 AVDAWTKDSFINVMNTFN 204
>gi|172056087|ref|YP_001812547.1| peptidyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
gi|229576703|sp|B1YGP7.1|PTH_EXIS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171988608|gb|ACB59530.1| Aminoacyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
Length = 185
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG KY TRHN+GF IDA A+ GI + KA FG G + V+L KP T
Sbjct: 4 IVGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
YMNLSGE+ PL +YK+ + VLV +DD+ LP +RLR G GGHNG+KS++ +
Sbjct: 64 YMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
G+GRPP + ++L F + + L + V +
Sbjct: 124 QDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTLQHVLSDSVNI 168
>gi|291453573|ref|ZP_06592963.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|359149694|ref|ZP_09182663.1| peptidyl-tRNA hydrolase [Streptomyces sp. S4]
gi|421744064|ref|ZP_16182071.1| peptidyl-tRNA hydrolase [Streptomyces sp. SM8]
gi|291356522|gb|EFE83424.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|406687525|gb|EKC91539.1| peptidyl-tRNA hydrolase [Streptomyces sp. SM8]
Length = 195
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 104/191 (54%), Gaps = 15/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP----- 72
PWL VGLGNPG +Y RHNVGF + D A G +A + +G AP
Sbjct: 6 PWLVVGLGNPGPEYAANRHNVGFMVADLLASRAGGKFKAHKSRAQVLEARIG-APGPGSR 64
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
++LAKPQ+YMNLSG L +YK+P R++ HD++ + G LRL+ GG GHNGL
Sbjct: 65 RIVLAKPQSYMNLSGGPVTALRDFYKVPTERIVAVHDELDIDYGALRLKLGGGDNGHNGL 124
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ + GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 125 KSMTKSLGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELDYFVDRAADAVEALVVA 184
Query: 184 GLTESARHFNT 194
GL + +N
Sbjct: 185 GLERAQSSYNA 195
>gi|403389193|ref|ZP_10931250.1| peptidyl-tRNA hydrolase [Clostridium sp. JC122]
Length = 190
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPGDKY TRHNVGF++ID A I +N K +G+ + V+L KP
Sbjct: 2 YLVVGLGNPGDKYDKTRHNVGFDIIDLLANEYNIDVNRQKFKGMYGETNINGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YK+P + V+V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 62 QTFMNLSGESVREVCDFYKIPNDNVIVIYDDISLEVGNIRIRPKGSAGGHNGIKNIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P G D +L KF+ RE ++ + + ++ ++S+ E+
Sbjct: 122 GTDVFPRVKIGVGGPAG--DLVNHVLGKFSKEERESLEKTFKPAIGAVETIISESTAEAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 NKFN 183
>gi|336437123|ref|ZP_08616832.1| hypothetical protein HMPREF0988_02417 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006257|gb|EGN36293.1| hypothetical protein HMPREF0988_02417 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 245
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 10/196 (5%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 71
V ++ VGLGNPG +Y+GTRHNVGFE+ID AE I+++ +A G+G +G
Sbjct: 48 SNEVKNLFIIVGLGNPGKEYEGTRHNVGFEVIDRIAEKYNIAVDGKKHRALIGKGMIGGQ 107
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V+LAKPQTYMNLSGES L YYK+ +LV +DD+ + G +R+R G GGHNG
Sbjct: 108 KVILAKPQTYMNLSGESVRSLLDYYKVDETEELLVIYDDISMENGQIRIRAKGSAGGHNG 167
Query: 131 LKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
+K+++ + G+G P + D ++L F+ +E ++ + + ++
Sbjct: 168 IKNIIAHLNGQVFPRIKVGVGEKPPRYDLADYVLGHFSKAEQELMEEGYDHALHAAEQII 227
Query: 182 SKGLTESARHFNTIQK 197
+T + +N +K
Sbjct: 228 DGEITAAMNEYNRKKK 243
>gi|52078548|ref|YP_077339.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648577|ref|ZP_08002791.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|404487418|ref|YP_006711524.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423680446|ref|ZP_17655285.1| peptidyl-tRNA hydrolase [Bacillus licheniformis WX-02]
gi|68052915|sp|Q65PG8.1|PTH_BACLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52001759|gb|AAU21701.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346412|gb|AAU39046.1| peptidyl-tRNA hydrolase Pth [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389344|gb|EFV70157.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|383441552|gb|EID49261.1| peptidyl-tRNA hydrolase [Bacillus licheniformis WX-02]
Length = 188
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+F GLGNPG Y+ TRHNVGF ID ++ I ++ +G GFV VLL KP
Sbjct: 3 VFAGLGNPGKTYENTRHNVGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE PL YY++P++ + V +DD+ LP G +RLR G GGHNG+KS +
Sbjct: 63 TYMNLSGECLRPLLDYYEIPVDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GIGRP M ++L F I A+++ + + L K E
Sbjct: 123 TSEFNRIRIGIGRPVNGMKVVDYVLGAFTDEEEPAIKEAVRQSAKACEASLEKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|297582392|ref|YP_003698172.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
gi|297140849|gb|ADH97606.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
Length = 191
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG Y+ TRHNVGF++ID ++ GI ++ K FG P L KP
Sbjct: 3 LAVGLGNPGKAYERTRHNVGFDVIDHVSDQLGIPLDQNKFKGVFGTHRTPKGPFTLLKPM 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES +A YY +P +LV +DD+ LP G +RLR GGHGGHNG++S +++
Sbjct: 63 TFMNLSGESIRQIADYYDIPPEDILVIYDDLDLPPGKIRLRTKGGHGGHNGIRSTLSHLN 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP +L +F+ RE +D A+++ + ++ +
Sbjct: 123 TESFNRIRIGIGRPEPGTKVTDHVLGRFSPDDRELVDEAVRQAAKAVEAWMDDSFILVMN 182
Query: 191 HFNT 194
FN+
Sbjct: 183 DFNS 186
>gi|323490991|ref|ZP_08096185.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
gi|323395347|gb|EGA88199.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
Length = 187
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG Y+ TRHN+GF++ID A + K + + V+L KP
Sbjct: 3 LIIGLGNPGKTYEDTRHNIGFKVIDYLASQWDAPLTQSKFKGMYSVSHRPEGKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES L YY + L ++V +DD+ LP G LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGESVAALMDYYNIELKDIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++LQ+F+ + A+++ + LSK E
Sbjct: 123 NQEFNRLRIGISRPPAGMKVPDYVLQRFSTEEIPEMTAAIKKSAAACETWLSKPYIEVMN 182
Query: 191 HFNTI 195
FN I
Sbjct: 183 EFNGI 187
>gi|291561351|emb|CBL40150.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SS3/4]
Length = 191
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 9/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y+ TRHN GF ++DA AE G ++ KA G+G +G V+L KPQ
Sbjct: 3 IIAGLGNPGKEYENTRHNAGFMVMDALAEKIGADISEKKHKALCGKGVIGGEKVILMKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SGES A YYK+ +L+ +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 63 TYMNSSGESIRAAADYYKVDPEDILIVYDDISLAPGQLRIRAKGSAGGHNGIKSIIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G P +MD ++L F+ + +D A++E + + +++ G+ ++
Sbjct: 123 TQEFPRVKVGVGEKPSRMDLADYVLGHFSKEEQATMDEAVKEAADAVCEIVNVGIAQAMN 182
Query: 191 HFNTIQKYK 199
N ++ K
Sbjct: 183 DHNRKKEEK 191
>gi|259047961|ref|ZP_05738362.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
gi|259035381|gb|EEW36636.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
Length = 203
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KYKGTRHNVGF +D A + + A F QG +G V+ KP
Sbjct: 20 LVVGLGNPGAKYKGTRHNVGFMTMDEVAYQEKFDFDKALFDAVFAQGQMGGEKVIFMKPL 79
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSGE+ PL YYK+ + +LV +DDM LP G +RLR G GGHNG+KS++
Sbjct: 80 TFMNLSGEAIRPLMNYYKIGIEDLLVVYDDMDLPVGKIRLRQKGSAGGHNGMKSIISCLG 139
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTESA 189
N + G+GRP +L +F E I A+Q+ V+ ++ + + ++
Sbjct: 140 TSEFNRIKVGVGRPKEGRTVVGHVLNRFEKEEEEDIIFAVQKSVDAIRSWIDTDDFVKTM 199
Query: 190 RHFN 193
FN
Sbjct: 200 NQFN 203
>gi|297200253|ref|ZP_06917650.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
gi|197716993|gb|EDY61027.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
Length = 200
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 109/197 (55%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T PWL VGLGNPG +Y G RHNVGF + D AE G +A +G +G
Sbjct: 4 STPANAPWLIVGLGNPGPEYAGNRHNVGFMVADLLAERVGGRFKRAGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V+LAKP ++MNLSG L +YK+P+ ++ HD++ + GVLRL+ GG
Sbjct: 64 PGPANRRVVLAKPMSFMNLSGGPVNALKDFYKVPVANIVAIHDELDIDYGVLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ F GIGRPPG+M F+L+ F++ R+ +D + + +
Sbjct: 124 NGHNGLKSMTKAFGAEYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 EALVIEGLERAQSTYNS 200
>gi|261417546|ref|YP_003251228.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|319765203|ref|YP_004130704.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
gi|261374003|gb|ACX76746.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|317110069|gb|ADU92561.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
Length = 186
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG++Y+ TRHNVGF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGEEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP G ++L +F + +D A+ + + + +
Sbjct: 123 TEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 DFN 185
>gi|89100523|ref|ZP_01173384.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
gi|89084789|gb|EAR63929.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
Length = 187
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHN+GF++ID + I ++ K FG G V V L KP
Sbjct: 3 LFVGLGNPGKEYEKTRHNIGFDVIDRLSGKLNIPLDQAKFKGVFGMGRVDGEKVFLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES PL YY + + V +DD+ LP G +RLR G GGHNG+KS +
Sbjct: 63 TYMNLSGESIRPLMDYYDIDTEDLAVIYDDLDLPPGKIRLRQKGSAGGHNGIKSTIAHTG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+ R GIGRP G M ++L +F A ++ +D A + + K E
Sbjct: 123 TQEFSRIRVGIGRPEGGMKVTDYVLGRFTAEEQKVMDEAADRSADACIDWIRKPFLEVMN 182
Query: 191 HFN 193
+N
Sbjct: 183 QYN 185
>gi|218134567|ref|ZP_03463371.1| hypothetical protein BACPEC_02470 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989952|gb|EEC55963.1| aminoacyl-tRNA hydrolase [[Bacteroides] pectinophilus ATCC 43243]
Length = 187
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 104/185 (56%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+GTRHN+GF +ID A++ I+M+ K G+G +G VLL KP
Sbjct: 2 YIIAGLGNPGKQYEGTRHNIGFAVIDELADAYNINMDMAKHKGICGKGMIGSNKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGE + YYK ++ VLV +DD+ L G LRLR G GGHNG+KS++ +
Sbjct: 62 QTFMNNSGECLREVLDYYKEDVDNVLVIYDDICLDVGRLRLRPKGSAGGHNGIKSIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P D ++L F + + + + V+ + ++L +G+ E
Sbjct: 122 GTEEFSRIRVGVGDKPKNYDLADWVLGHFPKEQLDDVRAGIDKAVKAVPVVLDRGIEEGM 181
Query: 190 RHFNT 194
FN
Sbjct: 182 NEFNA 186
>gi|154503861|ref|ZP_02040921.1| hypothetical protein RUMGNA_01687 [Ruminococcus gnavus ATCC 29149]
gi|336432001|ref|ZP_08611841.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153795460|gb|EDN77880.1| putative aminoacyl-tRNA hydrolase [Ruminococcus gnavus ATCC 29149]
gi|336019445|gb|EGN49169.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 192
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 10/191 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNP +Y+GTRHNVGFE+IDA A I ++T +A G+G + V+LAKP
Sbjct: 2 FIIVGLGNPTPEYEGTRHNVGFEVIDALARKYNIDVDTKKHRAYIGKGMIEGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ + +LV +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESVRSLLDYYKVDEEQELLVIYDDISLGVGQIRIRAKGSAGGHNGIKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L F+ +E+++ + V +K +++ + +
Sbjct: 122 LGGQVFPRIKVGVGEKPPKWDLADYVLGHFSKEEQEQMEEGYEHAVCAVKEIVTGNIEAA 181
Query: 189 ARHFNTIQKYK 199
+N +K K
Sbjct: 182 MNEYNRKKKEK 192
>gi|295702291|ref|YP_003595366.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
gi|294799950|gb|ADF37016.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
Length = 185
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GF ID AE IS++ +G G + V+L KP
Sbjct: 3 LIVGLGNPGKEYDRTRHNIGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSGES PL Y+ + + +LV +DD+ LPCG +RLR G GGHNG+KS++ + +
Sbjct: 63 TYMNLSGESIRPLMDYFDIDVKDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQHLK 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L +F ++ A++ + + L K E
Sbjct: 123 TQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDEMVHMEEAMKTSIHASEDFLGKPFLEVMN 182
Query: 191 HFN 193
+N
Sbjct: 183 RYN 185
>gi|28209961|ref|NP_780905.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
gi|46576800|sp|Q899I4.1|PTH_CLOTE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28202396|gb|AAO34842.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
Length = 188
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GFE +D + I + K FG G + + V+L KP
Sbjct: 2 FLLVGLGNPGKEYEKTRHNIGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + YY +P+ V+V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 TTYMNLSGESLREIIEYYNIPITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIYNL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P Q D + +L KF + I+ L+ E+ ++++G E+
Sbjct: 122 NSEDFIRLRIGVGKP--QRDMVSHVLGKFAKEDEKNIEEVLKIIPELAYTIINQGPQEAM 179
Query: 190 RHFNTIQ 196
+N +
Sbjct: 180 NKYNNFR 186
>gi|299536724|ref|ZP_07050034.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|424740017|ref|ZP_18168429.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZB2]
gi|298727838|gb|EFI68403.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|422946389|gb|EKU40800.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZB2]
Length = 188
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG Y+ TRHN+GF++IDA AE G + + + VLL KP
Sbjct: 3 IIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE GPL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGECVGPLMDYFDIEIEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++L KF+ + + A+ V ++ LSK +
Sbjct: 123 TQEFNRIRVGINRPPAGMKVADYVLAKFSKEDQVLMQDAIVNSVNAVEASLSKPFLDVMN 182
Query: 191 HFNT 194
HFN
Sbjct: 183 HFNV 186
>gi|433445433|ref|ZP_20409840.1| peptidyl-tRNA hydrolase [Anoxybacillus flavithermus TNO-09.006]
gi|432001081|gb|ELK21966.1| peptidyl-tRNA hydrolase [Anoxybacillus flavithermus TNO-09.006]
Length = 187
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHNVGF +ID A G + N + F G + V+L KP
Sbjct: 4 LFVGLGNPGKEYEQTRHNVGFMVIDELARRWGFTFNQTKFQGIFASGVISGEKVILCKPL 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSGE PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++++ +
Sbjct: 64 TYMNLSGECVRPLMDYYNIDVDDLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHHLK 123
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP M ++L ++ A + +I+ A+++ + + L +
Sbjct: 124 TEQFKRIRIGIDRPKNGMRVSDYVLGRWTAEEKIQIEQAIKKAADACERSLHVPFAQVMN 183
Query: 191 HFN 193
FN
Sbjct: 184 EFN 186
>gi|359410005|ref|ZP_09202470.1| Peptidyl-tRNA hydrolase [Clostridium sp. DL-VIII]
gi|357168889|gb|EHI97063.1| Peptidyl-tRNA hydrolase [Clostridium sp. DL-VIII]
Length = 191
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 15/173 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GF++ID A+ I +N K +G+GF+ + V+L KP
Sbjct: 2 FLIVGLGNPGKEYEDTRHNIGFKVIDNIAKEYNIEINRQKFKGVYGEGFINNNKVMLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +Y L + VLV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 62 TTYMNLSGESVREVVDFYNLENSEVLVIYDDISLEIGKLRIRDKGSAGGHNGIKSIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLK 178
GIG+P +D ++L +F I E ID + + E+++
Sbjct: 122 GSDIFSRIKVGIGQP--NVDLVKYVLGRFTKEEMTILSESIDASTKAAEEIIR 172
>gi|291550021|emb|CBL26283.1| peptidyl-tRNA hydrolase [Ruminococcus torques L2-14]
Length = 192
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+GTRHNVGF++ID +E I + +A G+G + V+L KP
Sbjct: 2 YIIAGLGNPTKEYEGTRHNVGFDVIDRLSERYNIDVTMEKHRALIGKGMIAGQKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES + YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESIRSVIDYYKVDPEKELIVIYDDISLGVGQLRIRAKGSAGGHNGIKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L F+ +E + V+ ++L++S ++E+
Sbjct: 122 LGGQVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMSEGYDNAVKAVELIVSDQISEA 181
Query: 189 ARHFNTIQK 197
+N +K
Sbjct: 182 MNEYNRKKK 190
>gi|255281408|ref|ZP_05345963.1| aminoacyl-tRNA hydrolase [Bryantella formatexigens DSM 14469]
gi|255267896|gb|EET61101.1| aminoacyl-tRNA hydrolase [Marvinbryantia formatexigens DSM 14469]
Length = 191
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y TRHNVGF+ ID AE I + +A G G + VLL KP
Sbjct: 2 YIIAGLGNPGRQYAHTRHNVGFDTIDVLAEKYNIKVEYEKGRALTGSGRIEGQSVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLP-LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
T+MNLSGES LA +YK+ ++++V +DD+ LP G LR+R G GGHNG+KS++++
Sbjct: 62 LTFMNLSGESIRALADFYKIDGTSQLIVIYDDISLPPGQLRIREKGSAGGHNGIKSIISH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D ++L +F+ R++++ AL+ + L++ G+ +
Sbjct: 122 LGGQEFLRIKVGVGEKPAGWDLADYVLSRFSQEERQKVEEALKRAADAAVCLMTDGVEAA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MNEYN 186
>gi|18311467|ref|NP_563401.1| peptidyl-tRNA hydrolase [Clostridium perfringens str. 13]
gi|110798942|ref|YP_697173.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|168205745|ref|ZP_02631750.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|168209723|ref|ZP_02635348.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|168213409|ref|ZP_02639034.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|168217602|ref|ZP_02643227.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|169343257|ref|ZP_02864268.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|182624327|ref|ZP_02952112.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|422347550|ref|ZP_16428461.1| peptidyl-tRNA hydrolase [Clostridium perfringens WAL-14572]
gi|422875430|ref|ZP_16921915.1| peptidyl-tRNA hydrolase [Clostridium perfringens F262]
gi|21263844|sp|Q8XHJ8.1|PTH_CLOPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390927|sp|Q0TMG7.1|PTH_CLOP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|18146151|dbj|BAB82191.1| stage V sporulation protein C [Clostridium perfringens str. 13]
gi|110673589|gb|ABG82576.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|169298555|gb|EDS80636.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|170662744|gb|EDT15427.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|170712152|gb|EDT24334.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|170715077|gb|EDT27259.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|177910545|gb|EDT72918.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|182380300|gb|EDT77779.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|373223820|gb|EHP46164.1| peptidyl-tRNA hydrolase [Clostridium perfringens WAL-14572]
gi|380303610|gb|EIA15911.1| peptidyl-tRNA hydrolase [Clostridium perfringens F262]
Length = 188
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+GF+ + V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES LA +YKL + ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 63 TYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G+P + +L KF+ RE I+ + + + ++ ES
Sbjct: 123 GDKFPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMN 180
Query: 191 HFNTI 195
FN +
Sbjct: 181 KFNGV 185
>gi|57234607|ref|YP_181337.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
gi|119390932|sp|Q3Z8W2.1|PTH_DEHE1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57225055|gb|AAW40112.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
Length = 189
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 12/187 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G + D ++LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG++ L Y L ++V DD+ LP G +RLR G GGHNG+ S++ +
Sbjct: 63 TYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDIG 122
Query: 140 ---------GIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG+P + + +L F RE +D A+ E L LL+ GL
Sbjct: 123 TKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGLDT 182
Query: 188 SARHFNT 194
++ FN+
Sbjct: 183 ASNRFNS 189
>gi|153814528|ref|ZP_01967196.1| hypothetical protein RUMTOR_00742 [Ruminococcus torques ATCC 27756]
gi|317500571|ref|ZP_07958792.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089328|ref|ZP_08338229.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336438725|ref|ZP_08618350.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 1_1_57FAA]
gi|145848022|gb|EDK24940.1| aminoacyl-tRNA hydrolase [Ruminococcus torques ATCC 27756]
gi|316898004|gb|EFV20054.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405509|gb|EGG85041.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336018318|gb|EGN48069.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 193
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+GTRHNVGFE+ID +E I ++ +A G+G + V+LAKP
Sbjct: 2 FIIAGLGNPTKQYEGTRHNVGFEVIDRISEKYNIDVDAKKHRALIGKGIIQGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ + ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESVRSLLDYYKVDEEHELIVIYDDISLDVGQLRIRAKGSAGGHNGMKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L F+ + +D V ++L++S + E+
Sbjct: 122 LGSQVFPRIKVGVGEKPAKYDLADYVLGHFSKGEAKLMDEGYDHAVHAVELIVSGQINEA 181
Query: 189 ARHFNTIQK 197
+N +K
Sbjct: 182 MNEYNRKKK 190
>gi|311070700|ref|YP_003975623.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|419823436|ref|ZP_14346983.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus C89]
gi|310871217|gb|ADP34692.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|388472409|gb|EIM09185.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus C89]
Length = 188
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 95/184 (51%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID A+ I +N +G GFV VLL KP
Sbjct: 3 VLAGLGNPGKNYENTRHNVGFMTIDQLAKEWNIELNQTKFNGLYGTGFVSGQKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLMDYYDVGNEELKVIYDDLDLPAGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F ID A+ + V+ + LSK E
Sbjct: 123 TSEFDRIRIGIGRPVNGMKVVDYVLGAFTKEEAPAIDEAISKSVKACEASLSKPFLEVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 EFNA 186
>gi|386840683|ref|YP_006245741.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100984|gb|AEY89868.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793975|gb|AGF64024.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 198
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 69
TA + PWL VGLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 1 MTTAASDPWLIVGLGNPGPEYAMNRHNVGFMVADLLAERIGGKFKRAGKAQAQVLEGRIG 60
Query: 70 DA-----PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 124
A V+LAKP +YMNLSG L +YK+PL V+ HD++ + LRL+ GG
Sbjct: 61 PAGPGSRRVVLAKPMSYMNLSGGPVNALRDFYKVPLGNVVAVHDELDIDYATLRLKLGGG 120
Query: 125 HGGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
GHNGLKS+ GIGRPPG+M F+L+ F++ R+ +D + +
Sbjct: 121 DNGHNGLKSMTKAMGPDYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRAADA 180
Query: 177 LKLLLSKGLTESARHFNT 194
++ L+++GL + +N+
Sbjct: 181 VECLVTEGLERAQSAYNS 198
>gi|443635055|ref|ZP_21119225.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443345108|gb|ELS59175.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 188
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F ID A+ + V+ + LSK E
Sbjct: 123 TSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIDGAVDKSVKACEASLSKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|365926653|ref|ZP_09449416.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420264919|ref|ZP_14767518.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394429555|gb|EJF01983.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 187
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGN G +Y GTRHNVGF ++D A+ +GIS N V +AT ++LAKP
Sbjct: 3 LIVGLGNIGKEYDGTRHNVGFMVLDELAKREGISFNKVKNEATLADFMFKGEKIILAKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG S PL +YK+P+ V+V HDDM LP G LRLR G GGHNG+KS++++
Sbjct: 63 TYMNESGRSVRPLMDFYKIPVEDVIVIHDDMDLPVGHLRLRQKGSAGGHNGIKSLISHLG 122
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GI P +M ++L +F + +++ + E + L ++
Sbjct: 123 TQEFKRMKIGIDHPQ-RMSVVNWVLSRFTKEQQNQLERGINEALAAL-----DNWIDTDN 176
Query: 191 HFNTIQKYKH 200
T+ KY H
Sbjct: 177 FMGTMNKYNH 186
>gi|269797672|ref|YP_003311572.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
gi|269094301|gb|ACZ24292.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
Length = 192
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T+HN+GF +IDA A+S + +A V VLL KPQ
Sbjct: 3 LVVGLGNPGKQYEKTKHNIGFMVIDAIADSAPHTPWREEQRAEVCSITVDGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
T+MNLSGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 63 TFMNLSGESVGPLMRYYKIDPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHIG 122
Query: 138 ------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
FR GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 123 TENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMN 182
Query: 191 HFN 193
FN
Sbjct: 183 QFN 185
>gi|323485662|ref|ZP_08091000.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|355624617|ref|ZP_09047811.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_3_54FAA]
gi|323401012|gb|EGA93372.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|354821779|gb|EHF06158.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_3_54FAA]
Length = 202
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y G+RHNVGF +D A+ I + KA G+G + V+L KP
Sbjct: 2 YIIAGLGNPGKEYAGSRHNVGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES + YYK + +V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESIRSVMDYYKTEPSEFIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIAHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L F+ +ER++ A ++G +++ G+ +
Sbjct: 122 GTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEKERMEQAFKDGAAAAVAMMNDGVDTAM 181
Query: 190 RHFN 193
FN
Sbjct: 182 NRFN 185
>gi|27262436|gb|AAN87499.1| Peptidyl-tRNA hydrolase [Heliobacillus mobilis]
Length = 190
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG Y+ TRHN+GF ++D AE G + +F + +G V L KPQT
Sbjct: 4 IVGLGNPGRDYEKTRHNIGFMVVDQLAERWGHDGFKAKFQGSFSEVRLGGQKVFLLKPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSG++ +AA+YKL +LV +DD+ LP G LR R G GGHNG+KS++
Sbjct: 64 YMNLSGQAASAMAAFYKLAPEDILVVYDDLDLPPGKLRGRTKGSSGGHNGIKSLIACLGS 123
Query: 136 NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
NF GIGRP + +++L+ F A I A+ + ++L L +G+ E
Sbjct: 124 ENFPRLKLGIGRPASRQPSASYVLESFRAEELADIQKAIDLACDAVELWLERGMIEVMNR 183
Query: 192 FNTIQK 197
FN +K
Sbjct: 184 FNGGEK 189
>gi|270307957|ref|YP_003330015.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
gi|270153849|gb|ACZ61687.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
Length = 189
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 12/187 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG +Y G RHNVGF+ + FA+ IS++ C + G G + D ++LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISLDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG++ L Y L ++V DD+ LP G +RLR G GGHNG+ S++ +
Sbjct: 63 TYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDIG 122
Query: 140 ---------GIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG+P + + +L F RE ++ A+ E L LL+ GL
Sbjct: 123 TKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMEKAITRASEALTCLLTCGLDT 182
Query: 188 SARHFNT 194
++ FN+
Sbjct: 183 ASNRFNS 189
>gi|357014640|ref|ZP_09079639.1| Pth [Paenibacillus elgii B69]
Length = 186
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W FVGLGNPG +Y+ TRHN+GF +D FA+ GI + CK G+G V V L KP
Sbjct: 3 W-FVGLGNPGRQYEATRHNIGFMALDRFADKHGIKITQSKCKGLLGEGHVAGQKVYLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES +YK + ++V +DD+ P G +RLR+ G GGHNG+KS + +
Sbjct: 62 QTYMNLSGESIRAFMDFYKAAIEDLIVIYDDLDTPYGQIRLRYQGSAGGHNGIKSAIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GI RP D ++L F+ +++ L + V+ ++ +L ++
Sbjct: 122 GTQSFQRIRMGISRPAPGRDIADYVLSTFSKEEFQQMPGLLDKTVDAMEHILEHPFEKTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|350264153|ref|YP_004875460.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349597040|gb|AEP84828.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 188
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F ID A+ + V+ + LSK E
Sbjct: 123 TSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPDIDGAIDKSVKACEASLSKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|440704383|ref|ZP_20885236.1| aminoacyl-tRNA hydrolase [Streptomyces turgidiscabies Car8]
gi|440273959|gb|ELP62625.1| aminoacyl-tRNA hydrolase [Streptomyces turgidiscabies Car8]
Length = 198
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 109/198 (55%), Gaps = 14/198 (7%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 69
T PWL VGLGNPG +Y RHNVGF + D AE G +A +G VG
Sbjct: 1 MTTDAGGPWLIVGLGNPGPEYAMNRHNVGFMVADLLAERIGGKFKRAGKAQAQVIEGRVG 60
Query: 70 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 124
+ V+LAKP +YMNLSG L +YK+ L+RV+ HD++ + GVLRL+ GG
Sbjct: 61 PPGPANRRVILAKPMSYMNLSGGPVNALREFYKVSLDRVVAVHDELDIDYGVLRLKLGGG 120
Query: 125 HGGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
GHNGLKS+ GIGRPPG+M F+L+ F++ R+ +D + +
Sbjct: 121 DNGHNGLKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRATDA 180
Query: 177 LKLLLSKGLTESARHFNT 194
++ L+++GL + +N+
Sbjct: 181 VESLVTEGLERAQGAYNS 198
>gi|56418581|ref|YP_145899.1| peptidyl-tRNA hydrolase [Geobacillus kaustophilus HTA426]
gi|375006854|ref|YP_004980483.1| peptidyl-tRNA hydrolase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236355|ref|YP_007400413.1| peptidyl-tRNA hydrolase [Geobacillus sp. GHH01]
gi|68052880|sp|Q5L3U7.1|PTH_GEOKA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56378423|dbj|BAD74331.1| stage V sporulation protein C (peptidyl-tRNA hydrolase)
[Geobacillus kaustophilus HTA426]
gi|359285699|gb|AEV17383.1| Peptidyl-tRNA hydrolase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205197|gb|AGE20662.1| peptidyl-tRNA hydrolase [Geobacillus sp. GHH01]
Length = 186
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHNVGF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP G ++L +F + +D A+ + + + +
Sbjct: 123 TEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 DFN 185
>gi|182420017|ref|ZP_02951251.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237669562|ref|ZP_04529542.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376054|gb|EDT73641.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237655006|gb|EEP52566.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 191
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 11/192 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GF+++D A+ I +N K G+GF+ V+L KP
Sbjct: 2 FLIVGLGNPGSQYEDTRHNIGFKVVDNIAKEYNIEINRQKFKGVCGEGFINGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +YKL + VLV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 62 TTYMNLSGESIREVVDFYKLSNDDVLVIYDDISLDVGRLRIREKGSAGGHNGIKSIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P +D ++L KF E ++ ++ + K ++S + +
Sbjct: 122 GTDIFPRIKVGVGQP--NVDLVNYVLGKFTKEEMEVLNESIDASTKAAKEIISNDVKTAM 179
Query: 190 RHFNTIQKYKHI 201
+N + K I
Sbjct: 180 NIYNGFKASKSI 191
>gi|407475939|ref|YP_006789816.1| peptidyl-tRNA hydrolase [Exiguobacterium antarcticum B7]
gi|407060018|gb|AFS69208.1| Peptidyl-tRNA hydrolase [Exiguobacterium antarcticum B7]
Length = 185
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG KY TRHN+GF +DA A+ GI + KA FG G + VLL KP T
Sbjct: 4 IVGLGNPGAKYANTRHNIGFLAVDALAKEHGIKLTESKFKAVFGTGMMKGERVLLVKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
YMNLSGE+ PL +YK+ + VLV +DD+ LP +RLR G GGHNG+KS++ +
Sbjct: 64 YMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
G+GRPP + ++L F + + L + V +
Sbjct: 124 QDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQVTLQHVLADSVNI 168
>gi|392958406|ref|ZP_10323918.1| peptidyl-tRNA hydrolase [Bacillus macauensis ZFHKF-1]
gi|391875576|gb|EIT84184.1| peptidyl-tRNA hydrolase [Bacillus macauensis ZFHKF-1]
Length = 186
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W FVGLGNPG +++ TRHNVGF +ID ++ GI +N +G G V V L KP
Sbjct: 3 W-FVGLGNPGKQFEKTRHNVGFFVIDELSKRFGIELNQAKFNGLYGSGMVNGEKVYLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES P Y+KL + + V +DD+ +PCG LRLR G GGHNG+KS++
Sbjct: 62 LTYMNLSGESVRPFMDYFKLDVEDLAVIYDDLDMPCGKLRLRQKGSAGGHNGMKSLIQHL 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GIGRP + F+L F E + + + + + + L
Sbjct: 122 GTDTFNRVRFGIGRPTNRQPVPDFVLSTFAKAEEEAVASLVTKSADACEAFLEMPFNRVM 181
Query: 190 RHFN 193
FN
Sbjct: 182 NAFN 185
>gi|297528421|ref|YP_003669696.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
gi|297251673|gb|ADI25119.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
Length = 186
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG++Y+ TRHNVGF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGEEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP G ++L +F + +D A+ + + +
Sbjct: 123 TEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEKPAVDKAVLRAANACEQAVKAPFIQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 DFN 185
>gi|304405855|ref|ZP_07387513.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
gi|304345098|gb|EFM10934.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
Length = 186
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG KY+ TRHNVGF ID+ A+ GIS+ CKA G+G VG V L KP
Sbjct: 3 WI-VGLGNPGTKYQNTRHNVGFMAIDSLAKRWGISVTQSKCKALIGEGNVGGTKVALIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGETVRAYMDYYKVALEDLIVIYDDLDTEMGRIRLRYQGSPGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP + ++L F ++++ +++ + + L ++
Sbjct: 122 GTQTFNRIRMGITRPLPGGNIADYVLDNFPKAEQDKLAIMIEQTCDAAEFALKATFEQTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|408829563|ref|ZP_11214453.1| peptidyl-tRNA hydrolase [Streptomyces somaliensis DSM 40738]
Length = 198
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 18/200 (9%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG--QGFV 68
T + PWL GLGNPG Y G RHNVGF ++D AE G S H KA +G +
Sbjct: 1 MTTDASAPWLIAGLGNPGPGYAGNRHNVGFMVVDLLAERIGGSFKR-HGKAQAQVLEGRI 59
Query: 69 GDAP------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHN 122
G AP V+LAKP +YMNLSG L +YK+P ++ HD++ + GVLRL+
Sbjct: 60 G-APGPAGRRVVLAKPMSYMNLSGGPLTALRDFYKVPTGNIVAVHDELDIDYGVLRLKLG 118
Query: 123 GGHGGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 174
GG GHNGLKS+ GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 119 GGDNGHNGLKSMTKAMGPDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRAA 178
Query: 175 EVLKLLLSKGLTESARHFNT 194
+ ++ L+++GL + +N+
Sbjct: 179 DAVEALVTEGLERAQSAYNS 198
>gi|282848944|ref|ZP_06258333.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294793436|ref|ZP_06758573.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|416998853|ref|ZP_11939522.1| aminoacyl-tRNA hydrolase [Veillonella parvula ACS-068-V-Sch12]
gi|282581219|gb|EFB86613.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294455006|gb|EFG23378.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|333977006|gb|EGL77865.1| aminoacyl-tRNA hydrolase [Veillonella parvula ACS-068-V-Sch12]
Length = 192
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T+HN+GF +IDA A+S + +A V VLL KPQ
Sbjct: 3 LVVGLGNPGKQYEKTKHNIGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
T+MNLSGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 63 TFMNLSGESVGPLMRYYKIDPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHIG 122
Query: 138 ------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
FR GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 123 TENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMN 182
Query: 191 HFN 193
FN
Sbjct: 183 QFN 185
>gi|294791582|ref|ZP_06756730.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
gi|294456812|gb|EFG25174.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
Length = 192
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T+HN+GF +IDA A+S + +A V VLL KPQ
Sbjct: 3 LVVGLGNPGKQYEKTKHNIGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
T+MNLSGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 63 TFMNLSGESVGPLMRYYKIDPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHIG 122
Query: 138 ------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
FR GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 123 TENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMN 182
Query: 191 HFN 193
FN
Sbjct: 183 QFN 185
>gi|121534877|ref|ZP_01666696.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
gi|121306476|gb|EAX47399.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
Length = 185
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHNVGF ++D A G+S +A + + G VLL KPQ
Sbjct: 3 VIVGLGNPGREYSATRHNVGFMVVDELARRWGVSDWRRRHEAEVAE-YRGAEAVLLVKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSG + G +A +YKL ++V DD+ LP G LRLR G GGH G++S++
Sbjct: 62 TYMNLSGRAVGEIARWYKLAAEDIIVVFDDLDLPVGRLRLRMKGSSGGHRGIESILAQLG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP ++L KF I+ A+ + ++ +L GL ++
Sbjct: 122 ADTFARVRVGIGRPPQGWATADYVLSKFTPDEAPLIEQAIVRAADAVETILKDGLNKAMN 181
Query: 191 HFN 193
FN
Sbjct: 182 AFN 184
>gi|403508638|ref|YP_006640276.1| peptidyl-tRNA hydrolase [Nocardiopsis alba ATCC BAA-2165]
gi|402803467|gb|AFR10877.1| peptidyl-tRNA hydrolase [Nocardiopsis alba ATCC BAA-2165]
Length = 211
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 112/190 (58%), Gaps = 9/190 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
A + WL VGLGNPG KY G RHN GF ++DA A +G A + + A V
Sbjct: 20 AESERWLVVGLGNPGPKYAGNRHNAGFMVVDALAADKGERWKAHKANADVVETRIDGASV 79
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKP+T+MN+SG LA +YK+P+ R++V HD+M + G L+L+ GG GGHNGLKS
Sbjct: 80 VLAKPRTFMNVSGGPIAGLAKFYKVPMERIVVVHDEMDIDYGALKLKRGGGSGGHNGLKS 139
Query: 134 VMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
+ G+GRPPG+MDP +L+ F++ R ++ ++ + ++ +L++G
Sbjct: 140 TTASLSGPDYLRVRFGVGRPPGRMDPAVHVLRDFSSTERPELELNVERAADAVRTILTEG 199
Query: 185 LTESARHFNT 194
L + F+T
Sbjct: 200 LGRAQNVFHT 209
>gi|398817464|ref|ZP_10576082.1| peptidyl-tRNA hydrolase [Brevibacillus sp. BC25]
gi|398030018|gb|EJL23458.1| peptidyl-tRNA hydrolase [Brevibacillus sp. BC25]
Length = 189
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G + VLL KPQ
Sbjct: 3 VIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVTQNKFRALVGEGRIEADKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES + +YKL + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP ++L F R I A+ + + + +
Sbjct: 123 TQEFKRIKVGISRPESGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLKVMN 182
Query: 191 HFNTIQK 197
H+N+++K
Sbjct: 183 HYNSLKK 189
>gi|254384996|ref|ZP_05000331.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
gi|194343876|gb|EDX24842.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
Length = 196
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 13/190 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG-----DAP 72
PWL VGLGNPG +Y G RHN+GF + D A+ +A +G +G +
Sbjct: 7 PWLIVGLGNPGAEYAGNRHNIGFMVADLLADRMRGKFKAHKARAQVVEGRMGPPGPANRR 66
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP ++MNLSG L +YK+PL R++ HD++ + LRL+ GG GHNGLK
Sbjct: 67 VVLAKPMSFMNLSGGPVTALRDFYKVPLERIVAIHDELDIDYPTLRLKLGGGDNGHNGLK 126
Query: 133 SVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
S+ + GIGRPPG+M F+L+ F++ R+ +D + + ++ L+++G
Sbjct: 127 SMTKSMGPDYHRVRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVECLIAEG 186
Query: 185 LTESARHFNT 194
L + +N+
Sbjct: 187 LERAQSSYNS 196
>gi|424779781|ref|ZP_18206673.1| Peptidyl-tRNA hydrolase [Catellicoccus marimammalium M35/04/3]
gi|422843531|gb|EKU27961.1| Peptidyl-tRNA hydrolase [Catellicoccus marimammalium M35/04/3]
Length = 193
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 10/168 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAKP 78
L VGLGN G +Y+GTRHN+GF ++D A+ +GIS ++ K +LL KP
Sbjct: 3 LIVGLGNIGTEYEGTRHNIGFMVLDELAKKKGISFHSDRAFKGEIASFSEQGEKILLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +YK+PL +++ HDD+ LPCG LR R +G GGHNGLKS+ N
Sbjct: 63 STYMNLSGESVRAVVDFYKIPLEDIMIVHDDLDLPCGSLRFRASGSAGGHNGLKSIFQNC 122
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GIGRP +L F+ R I+ A+Q GVE L
Sbjct: 123 GTQKFLRLKIGIGRPHPGKTVVYHVLHPFSKEERMEIEFAIQNGVEAL 170
>gi|160878271|ref|YP_001557239.1| aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
gi|189038285|sp|A9KR32.1|PTH_CLOPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160426937|gb|ABX40500.1| Aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
Length = 191
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ +GLGNP +Y+ TRHN+GF+ I A+ IS++T KA G+G +G V+LAKP
Sbjct: 2 YIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES L +YK+ ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P D ++L +F I AL++ + + +L G +
Sbjct: 122 GSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETILRDGAKVAM 181
Query: 190 RHFN 193
FN
Sbjct: 182 NLFN 185
>gi|160895087|ref|ZP_02075861.1| hypothetical protein CLOL250_02638 [Clostridium sp. L2-50]
gi|156863518|gb|EDO56949.1| aminoacyl-tRNA hydrolase [Clostridium sp. L2-50]
Length = 185
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY GTRHNVGF +I A+ I ++ KA +G+G + V+LA PQ
Sbjct: 3 LIVGLGNPGTKYAGTRHNVGFSVIVGLADKYNIELSEKKHKAIYGRGMIEGEKVILAMPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSGES L YYK + V+V +DD+ L G LR+R G GGHNG+K+++++
Sbjct: 63 TFMNLSGESVRELVDYYKCDPSDVIVAYDDIDLAVGKLRIREKGSAGGHNGMKNIISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIG+ P +MD ++L +F I + + L+L +
Sbjct: 123 TQEFVRVRVGIGKKPDRMDLADYVLSRFGKDELPEIKAGCDNAGDAIALILKDSAAAAMN 182
Query: 191 HFN 193
+N
Sbjct: 183 KYN 185
>gi|154496045|ref|ZP_02034741.1| hypothetical protein BACCAP_00329 [Bacteroides capillosus ATCC
29799]
gi|150274600|gb|EDN01664.1| aminoacyl-tRNA hydrolase [Pseudoflavonifractor capillosus ATCC
29799]
Length = 196
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL V LGNPGDKY+ TRHNVGF + D AE + I + + KA +G A VLL KP
Sbjct: 12 WLVVCLGNPGDKYENTRHNVGFMVADELAERKNIPVQRLKFKALTNTTQLGGAQVLLMKP 71
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE+ A +YK+ + VLV DD+ LP G LR+R +G GGHNGLK+++
Sbjct: 72 VTYMNLSGEAVRQAADFYKVSPDHVLVVSDDVSLPVGRLRIRKSGSAGGHNGLKNIIQQL 131
Query: 139 ---------RGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G +P D ++L KF ++ ID A++ + ++ + G ++
Sbjct: 132 GTDQFPRLKVGVGEKPHPDYDLADWVLGKFVGEDKKTIDAAIKRAADAVECYIQDGPDKA 191
Query: 189 ARHFN 193
FN
Sbjct: 192 MSRFN 196
>gi|226309688|ref|YP_002769582.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
gi|254783855|sp|C0ZHD7.1|PTH_BREBN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226092636|dbj|BAH41078.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
Length = 189
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G + VLL KPQ
Sbjct: 3 VIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES + +YKL + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RP ++L F R I A+ + + + +
Sbjct: 123 TQEFKRIKVGISRPEPGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLKVMN 182
Query: 191 HFNTIQK 197
HFN+++K
Sbjct: 183 HFNSLKK 189
>gi|16077121|ref|NP_387934.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307863|ref|ZP_03589710.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312185|ref|ZP_03593990.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317118|ref|ZP_03598412.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321381|ref|ZP_03602675.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313723|ref|YP_004206010.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|384173714|ref|YP_005555099.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386756632|ref|YP_006229848.1| peptidyl-tRNA hydrolase [Bacillus sp. JS]
gi|402774296|ref|YP_006628240.1| peptidyl-tRNA hydrolase [Bacillus subtilis QB928]
gi|418030601|ref|ZP_12669086.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428277468|ref|YP_005559203.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|430757318|ref|YP_007211206.1| Stage V sporulatio protein SpoVC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452913216|ref|ZP_21961844.1| peptidyl-tRNA hydrolase [Bacillus subtilis MB73/2]
gi|586021|sp|P37470.1|PTH_BACSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; AltName:
Full=Stage V sporulation protein C
gi|467442|dbj|BAA05288.1| stage V sporulation [Bacillus subtilis]
gi|2632320|emb|CAB11829.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|291482425|dbj|BAI83500.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|320019997|gb|ADV94983.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|349592938|gb|AEP89125.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351471660|gb|EHA31773.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|384929914|gb|AFI26592.1| peptidyl-tRNA hydrolase [Bacillus sp. JS]
gi|402479482|gb|AFQ55991.1| Peptidyl-tRNA hydrolase [Bacillus subtilis QB928]
gi|407955744|dbj|BAM48984.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7613]
gi|407963015|dbj|BAM56254.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7003]
gi|430021838|gb|AGA22444.1| Stage V sporulatio protein SpoVC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452118244|gb|EME08638.1| peptidyl-tRNA hydrolase [Bacillus subtilis MB73/2]
Length = 188
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F I+ A+ + V+ + LSK E
Sbjct: 123 TSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|225387032|ref|ZP_03756796.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
gi|225046850|gb|EEG57096.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
Length = 212
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+ TRHNVGFE+ID A+ S++ K +G+ +G V+L KP
Sbjct: 23 YIIAGLGNPTKEYEKTRHNVGFEVIDVLADRLFTSVDEKKFKGYYGKAVIGGEKVILLKP 82
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES A +YK+ + ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 83 QTFMNLSGESVRAAADFYKVDPDHIIVVYDDVSLDVGQLRIRTKGSAGGHNGIKNIIAHL 142
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F R ++ A +E E +++++ +G +
Sbjct: 143 GTQEFPRIKVGVGNKPPRMDLADYVLGRFPREERGLMEDAFKEAAEAVEVMIQEGAGTAM 202
Query: 190 RHFN 193
FN
Sbjct: 203 NRFN 206
>gi|303229597|ref|ZP_07316385.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|303231900|ref|ZP_07318609.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|401679444|ref|ZP_10811371.1| aminoacyl-tRNA hydrolase [Veillonella sp. ACP1]
gi|429760033|ref|ZP_19292525.1| aminoacyl-tRNA hydrolase [Veillonella atypica KON]
gi|302513429|gb|EFL55462.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|302515722|gb|EFL57676.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|400219378|gb|EJO50246.1| aminoacyl-tRNA hydrolase [Veillonella sp. ACP1]
gi|429178745|gb|EKY20017.1| aminoacyl-tRNA hydrolase [Veillonella atypica KON]
Length = 192
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T+HN+GF +IDA A+S + KA V VLL KPQ
Sbjct: 3 LVVGLGNPGKQYEATKHNIGFMVIDAIADSVSHTPWREEQKAEVCSINVAGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
T+MN SGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 63 TFMNASGESVGPLMRYYKIDPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHIG 122
Query: 138 ------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
FR GIGRP Q +L F+ +E++ +++ V+ + L G+ +
Sbjct: 123 TENFPRFRVGIGRPLPQWTVIDHVLAPFSEENQEKVQKGIKDTVKAVLGTLEVGIDKGMN 182
Query: 191 HFN 193
FN
Sbjct: 183 QFN 185
>gi|225375821|ref|ZP_03753042.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
gi|225212256|gb|EEG94610.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
Length = 198
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNP +Y+ TRHN+GF+++DA A+ IS++ KA G+G + V+LAKP
Sbjct: 10 FLIVGLGNPTKQYEKTRHNIGFDVMDALADKYNISISENKHKALCGKGVIEGMKVVLAKP 69
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
QTYMNLSGES L YYKL P + ++V DD+ L G +R+R G GGHNG+K+++
Sbjct: 70 QTYMNLSGESVAELVNYYKLDPESELIVVFDDISLEPGNIRIRKKGSAGGHNGIKNIIAM 129
Query: 136 ---NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF G+G P D ++L F+ R +++ A+ ++ L++ + ++
Sbjct: 130 TGTQNFMRIKVGVGEKPKGWDLADYVLGHFSTEDRAKVEEAIGHAMDATVLMMQGEVDKA 189
Query: 189 ARHFNTIQK 197
+N+ K
Sbjct: 190 MNDYNSKNK 198
>gi|392939895|ref|ZP_10305539.1| peptidyl-tRNA hydrolase [Thermoanaerobacter siderophilus SR4]
gi|392291645|gb|EIW00089.1| peptidyl-tRNA hydrolase [Thermoanaerobacter siderophilus SR4]
Length = 185
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+GTRHNVGF +ID AE GI++ + K+ G+G+ V+L KP
Sbjct: 2 YVISGLGNPGREYEGTRHNVGFMVIDELAEKLGINVTKLKFKSLVGEGYFKGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT++N SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+KS++
Sbjct: 62 QTFVNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSIIYLL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D + +L KF ++ ID A+ + + + ++ G+ +
Sbjct: 122 NSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 SKFN 183
>gi|164688874|ref|ZP_02212902.1| hypothetical protein CLOBAR_02522 [Clostridium bartlettii DSM
16795]
gi|164602078|gb|EDQ95543.1| aminoacyl-tRNA hydrolase [Clostridium bartlettii DSM 16795]
Length = 183
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 9/181 (4%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTY 81
+GLGNPGDKY+ TRHNVGF +ID A+ I ++ + KA G+G VG V+L KP TY
Sbjct: 1 MGLGNPGDKYEKTRHNVGFNVIDLLAKEYSIDVSKIKHKALIGEGRVGTEKVILVKPMTY 60
Query: 82 MNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-----N 136
MNLSGES + YY + L ++V +DD+ L G +R+R G G HNG++S++ N
Sbjct: 61 MNLSGESVADICNYYNIDLENLIVIYDDIDLDVGKIRIRKKGSGGTHNGMRSIIKCLGSN 120
Query: 137 NF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHF 192
F GI +P D F+L +F+ + + + + V + + L + +
Sbjct: 121 EFPRVRVGISKPKNGQDLADFVLSRFSKEDEKSLQESFENSVAAVDCAIRNDLDLAMNRY 180
Query: 193 N 193
N
Sbjct: 181 N 181
>gi|315644368|ref|ZP_07897508.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
gi|315280245|gb|EFU43537.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
Length = 187
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG Y+ TRHNVGF +DA AE G+ N CK+ +G +G + +L KP
Sbjct: 3 WI-VGLGNPGPAYEKTRHNVGFMALDALAERHGMKFNQNKCKSVIAEGMIGGSKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T+MNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTFMNLSGEAVRAYMDYYKVNLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F RE++ + ++E + L+ L ++
Sbjct: 122 GTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQSMVEETCDALEFSLDHTFEQTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|302560228|ref|ZP_07312570.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
gi|302477846|gb|EFL40939.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
Length = 202
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDA----- 71
PWL VGLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 12 PWLIVGLGNPGPEYAMNRHNVGFMVADLLAERIGARFKRAGKAQAQVLEGRIGPPGPAGR 71
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP +YMNLSG L +YK+P+ RV+ HD++ + G LRL+ GG GHNGL
Sbjct: 72 RVVLAKPMSYMNLSGGPVNALREFYKVPVERVVAVHDELDIDYGTLRLKLGGGDNGHNGL 131
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ F GIGRPPG+M F+L+ F + R+ +D + + ++ L+ +
Sbjct: 132 KSMTKAFGRDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYFVDRAADAVECLVIE 191
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 192 GLERAQGTYNS 202
>gi|134297988|ref|YP_001111484.1| aminoacyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
gi|172044208|sp|A4J0Q6.1|PTH_DESRM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134050688|gb|ABO48659.1| peptidyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
Length = 206
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 104/180 (57%), Gaps = 14/180 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GF +ID A+ +S KA Q +G V+LAKPQ
Sbjct: 3 LIVGLGNPGTEYAKTRHNIGFMVIDRLADESRVSTEKNQHKAQICQITIGSEKVILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSG+S L +YKL + + V DDM LP GVLR+R NG GG GLK+++
Sbjct: 63 TYMNLSGQSVVALMNWYKLSPDELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNIIELLG 122
Query: 139 --------RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRP G +D +L K + E I+ A+Q VE +K+ + +G T++A
Sbjct: 123 TQQFPRMRVGIGRPEHGAVD---HVLGKISEAEAELINPAIQTAVEAVKVWVLEG-TQAA 178
>gi|449092766|ref|YP_007425257.1| peptidyl-tRNA hydrolase [Bacillus subtilis XF-1]
gi|449026681|gb|AGE61920.1| peptidyl-tRNA hydrolase [Bacillus subtilis XF-1]
Length = 188
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F I+ A+ + V+ + LSK E
Sbjct: 123 TSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEGAVDKSVKACEASLSKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|256826844|ref|YP_003150803.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
gi|256582987|gb|ACU94121.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
Length = 185
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG++Y+ TRHN GF+ ID A+ G C A +G + + V+LAKP
Sbjct: 2 YLIVGLGNPGEEYEHTRHNAGFDTIDILADEAGARYWKNECGALSARGVLANEEVVLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN- 137
Q+YMN SG L Y + + ++V HDD+ + G +R++ GGH GHNGL+S+ +
Sbjct: 62 QSYMNTSGGPVKQLCNTYGIAPDNLIVIHDDLDIAPGRIRVKFGGGHAGHNGLRSICDKL 121
Query: 138 -----FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR GIGRPPG+M ++L + A++ E + L+ GL ++
Sbjct: 122 GTRDWFRVRCGIGRPPGRMSVSDYVLSRPRHEAQDDFQVGCATAAEAVSFLIRNGLEKTQ 181
Query: 190 RHFN 193
+ FN
Sbjct: 182 QEFN 185
>gi|433649773|ref|YP_007294775.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis JS623]
gi|433299550|gb|AGB25370.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis JS623]
Length = 192
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A L VGLGNPG +Y TRHN+GF + D ++ G S VH K A G +G
Sbjct: 1 MAETILVVGLGNPGAQYATTRHNIGFLVADILSDRLG-SGFKVHKKSGAEVATGRLGGQS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y +P ++V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVGPLAKFYSVPPADIVVIHDELDIDFGRIRLKFGGGVAGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N+F+ GIGRPPG+M+ AF+L F + T ++ + +LL+S+
Sbjct: 120 SVGSSLGTNDFQRVRIGIGRPPGRMEGAAFVLGNFTNAEWREVPTICEQAADATELLVSQ 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|313893361|ref|ZP_07826935.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442130|gb|EFR60548.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 192
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T+HN+GF ++DA A+S + +A V VLL KPQ
Sbjct: 3 LVVGLGNPGKQYEKTKHNIGFMVVDAIADSVPHTPWREEQRAEVCSITVAGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
T+MN+SGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 63 TFMNVSGESVGPLMRYYKIDPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHLG 122
Query: 138 ------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
FR GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 123 TENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMN 182
Query: 191 HFN 193
FN
Sbjct: 183 QFN 185
>gi|296131719|ref|YP_003638966.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
gi|296030297|gb|ADG81065.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
Length = 187
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF +++ AE GI++N K+ FG+G + ++L KPQ
Sbjct: 3 LIVGLGNPGKEYEFTRHNIGFLVLEQLAEKWGIAVNKNRFKSLFGEGIFQEDKIVLLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSG++ +YKL +LV +DDM LP G LRLR +GG GGH G++S++
Sbjct: 63 TFMNLSGQAVLDAVRFYKLESTDILVIYDDMDLPTGRLRLRKSGGAGGHRGMESIIYLLN 122
Query: 136 -NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
NF GIG+P D +L +F RER+ A+ + V ++L+L +G+ ++
Sbjct: 123 TENFPRLRIGIGKPGPDKDAVQHVLGRFGEEERERVVAAVSKAVAAVELVLKEGVEKAMN 182
Query: 191 HFN 193
N
Sbjct: 183 TVN 185
>gi|197302597|ref|ZP_03167652.1| hypothetical protein RUMLAC_01326 [Ruminococcus lactaris ATCC
29176]
gi|197298495|gb|EDY33040.1| aminoacyl-tRNA hydrolase [Ruminococcus lactaris ATCC 29176]
Length = 192
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 10/189 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+GTRHNVGF++ID A I ++ +A G+G + V+LAKP
Sbjct: 2 FIIAGLGNPTREYEGTRHNVGFDVIDRLAVRYNIDVDVKKHRALIGKGMIAGQKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES + YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESIRSILDYYKVDPETELIVIYDDISLDVGKLRIRAKGSAGGHNGIKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L F+ +E ++ ++ V+ +++++S ++ +
Sbjct: 122 VGGPVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMEEGYEDAVKAVEMIVSGDISGA 181
Query: 189 ARHFNTIQK 197
+N +K
Sbjct: 182 MNEYNRKKK 190
>gi|108801218|ref|YP_641415.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119870369|ref|YP_940321.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126437198|ref|YP_001072889.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
gi|119390965|sp|Q1B425.1|PTH_MYCSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229423|sp|A3Q5H1.1|PTH_MYCSJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229424|sp|A1UL23.1|PTH_MYCSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108771637|gb|ABG10359.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119696458|gb|ABL93531.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126236998|gb|ABO00399.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
Length = 192
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 105/182 (57%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG Y TRHNVGF + D A G H K A G +
Sbjct: 1 MAEPLLVVGLGNPGPNYAKTRHNVGFVVADLLAGRIGSGFKA-HRKSGADIATGRLAGRA 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+TYMN SG + GPLA +Y + V+V HD++ + G +RL+ GG GHNGLK
Sbjct: 60 VVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLKFGGGVAGHNGLK 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV +F+ G+GRPPG+ D ++L+ F ++ R + T ++ + +LL+++
Sbjct: 120 SVAAALGTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLIAQ 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|404421907|ref|ZP_11003612.1| peptidyl-tRNA hydrolase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403658493|gb|EJZ13221.1| peptidyl-tRNA hydrolase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 191
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 117/195 (60%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG Y TRHNVGF + D A G S VH K A G + AP
Sbjct: 1 MAEPLLVVGLGNPGPAYAKTRHNVGFMVADILAARIG-SAFKVHKKSGAEVITGRLAGAP 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y +P R++V HD++ + G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVGPLAKFYSVPPGRIVVIHDELDIDFGRIRLKVGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV + +F+ G+GRPPG+ DP AF+L+ F A R + T ++ + +LL+++
Sbjct: 120 SVASALGSKDFQRVRIGVGRPPGRKDPAAFVLEAFTAAERTELPTICEQAADATELLIAQ 179
Query: 184 GLTESARHFNTIQKY 198
GL + NT+ +
Sbjct: 180 GLEPAQ---NTVHAW 191
>gi|442805917|ref|YP_007374066.1| peptidyl-tRNA hydrolase Pth [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741767|gb|AGC69456.1| peptidyl-tRNA hydrolase Pth [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 191
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++F GLGNPG +Y TRHNVGFE ID + I + KA G+GF+ V+L KP
Sbjct: 2 FVFAGLGNPGKQYDWTRHNVGFECIDYLSVLYNIPVAKAKFKALVGEGFIEGEKVMLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMN SGES + Y+ L L+R++V +DD+ L G +R+R G G HNG++S++ +
Sbjct: 62 QTYMNNSGESLREIVDYFNLSLDRLVVIYDDIDLDLGTIRIRSRGSAGTHNGMRSILYHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D +++L K N RE + ++ ++ ++ G+ +
Sbjct: 122 ESEDFPRIRIGIGKPGPQQDLVSYVLGKLNDDEREIMTEVIKRVALSVREIIVSGVDMAM 181
Query: 190 RHFN 193
FN
Sbjct: 182 SKFN 185
>gi|404330858|ref|ZP_10971306.1| peptidyl-tRNA hydrolase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 192
Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 104/186 (55%), Gaps = 11/186 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GFE++D AE I ++ KA FG+G + V+L KP
Sbjct: 5 MIVGLGNPGSEYAHTRHNMGFEVVDRLAEKYQIRLDHSKFKALFGKGTIDGNAVILVKPL 64
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SGE+ GPL ++KL P + +LV HDDM L G LRLRH G GGHNG+KS++
Sbjct: 65 TYMNASGEAVGPLLHFFKLVPDDDLLVIHDDMDLNMGRLRLRHKGSSGGHNGIKSLILHL 124
Query: 136 --NNFR----GIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF G+G P Q ++L +FN + ++ + + LS +E
Sbjct: 125 GTENFARIKVGVGHPERTQQAVVNYVLSRFNREEQAIMEDTFERASDAAAAWLSLPFSEL 184
Query: 189 ARHFNT 194
FN
Sbjct: 185 MNRFNA 190
>gi|345020768|ref|ZP_08784381.1| peptidyl-tRNA hydrolase [Ornithinibacillus scapharcae TW25]
Length = 186
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG KY+ TRHN+GF +ID + ++ K + + VLL +PQT
Sbjct: 4 IVGLGNPGKKYQSTRHNIGFMVIDELLSRHNLKLDKDKFKGKYTIATIHGEKVLLLEPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN---- 136
YMNLSGES PL YY + + VLV +D++ LP G +RLR GGHGGHNG++S++
Sbjct: 64 YMNLSGESLRPLMDYYDVAVEDVLVVYDELDLPTGKIRLRQKGGHGGHNGIRSIITHLGT 123
Query: 137 -NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+F+ G+GRP + ++L F +E + ++ + + + L K +
Sbjct: 124 KDFKRIRLGVGRPTSSIPVVDYVLGDFAKAEQELVQESIAKAADACENWLEKSFDKVMND 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|383639358|ref|ZP_09951764.1| peptidyl-tRNA hydrolase [Streptomyces chartreusis NRRL 12338]
Length = 200
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T A PWL VGLGNPG +Y G RHNVGF + D A G +A +G +G
Sbjct: 4 TTDAAAPWLIVGLGNPGPEYAGNRHNVGFMVADLLAGRVGGRFKRAGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
V++AKP +YMNLSG L +YK+P+ V+ HD++ + G LRL+ GG
Sbjct: 64 PGPMSRRVIVAKPMSYMNLSGGPVNALRDFYKVPVAHVVAIHDELDIDYGTLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ F GIGRPPG+M F+L+ F++ R+ +D + + +
Sbjct: 124 NGHNGLKSMTKAFGADYHRVRFGIGRPPGRMPVADFVLRDFSSAERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 ECLVIEGLERAQSTYNS 200
>gi|319654944|ref|ZP_08009018.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
gi|317393369|gb|EFV74133.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
Length = 186
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GF++ID ++ I +N K FG G+V V L KP
Sbjct: 3 LIVGLGNPGKQYDKTRHNIGFDVIDVLSDRLNIPLNQAKLKGVFGTGYVNGEKVFLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES + Y+++ + ++V +DD+ LP G +RLR G GGHNG+KS +
Sbjct: 63 TYMNLSGESIRAVMDYFEINDDELVVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIAHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++L +F + +D ++ + + K +
Sbjct: 123 TQEFNRIRVGIDRPPSGMKVPDYVLGRFTKEEQAIMDETAKKCADACEEWFKKPFLQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 DFN 185
>gi|410726039|ref|ZP_11364299.1| peptidyl-tRNA hydrolase [Clostridium sp. Maddingley MBC34-26]
gi|410601471|gb|EKQ55982.1| peptidyl-tRNA hydrolase [Clostridium sp. Maddingley MBC34-26]
Length = 191
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GF++ID A I +N K +G+GF+ V+L KP
Sbjct: 2 FLIVGLGNPGKEYEDTRHNIGFKVIDNIAREYNIELNRQKFKGIYGEGFIEGKKVMLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +Y L +LV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 62 ATYMNLSGESIREVVDFYNLDNTEILVIYDDISLEVGTLRIREKGSAGGHNGIKSIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKF----NAIARERIDTALQEGVEVLK 178
G+G+P G D ++L KF I + I+ + + E++K
Sbjct: 122 GSDVFSRIKVGVGQPKG--DLIKYVLGKFTKEETVILNQVIEVSTKATAEIIK 172
>gi|336425952|ref|ZP_08605966.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336011417|gb|EGN41377.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 194
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+ TRHNVGF++IDA A+ GI + KA G+G++ V+LAKP
Sbjct: 2 YIIAGLGNPKREYENTRHNVGFDVIDALADKYGIRVIERKHKALVGRGYIDGMKVVLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QT+MNLSGES + YYK+ P ++V DD+ L G LR+R G GGHNGLK+++ +
Sbjct: 62 QTFMNLSGESIREIIDYYKVDPQTELIVVCDDISLDLGQLRIRKKGSAGGHNGLKNIIAH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D ++L F R+ +D + VE ++ KG E+
Sbjct: 122 LGTDGFARIKMGVGNKPEGYDLADYVLGHFTGGERKIMDECIALAVEAAVTMMEKGPDEA 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNRFN 186
>gi|374611741|ref|ZP_09684525.1| peptidyl-tRNA hydrolase [Mycobacterium tusciae JS617]
gi|373548709|gb|EHP75394.1| peptidyl-tRNA hydrolase [Mycobacterium tusciae JS617]
Length = 192
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG +Y TRHN+GF + D A+ G S VH K A G +
Sbjct: 1 MAEPQLVVGLGNPGPQYATTRHNIGFLVADILADRIG-SGFKVHKKSGAEVVTGQLAGRA 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG PLA +Y + ++V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVAPADIIVIHDELDIDFGRIRLKSGGGVAGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N+F GIGRPPG+M+ AF+L FN+ + + T ++ + +LL+S+
Sbjct: 120 SVGSALGTNDFARVRIGIGRPPGRMEGAAFVLGTFNSAEWKEVPTICEQAADATELLVSQ 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|333026423|ref|ZP_08454487.1| putative peptidyl-tRNA hydrolase [Streptomyces sp. Tu6071]
gi|332746275|gb|EGJ76716.1| putative peptidyl-tRNA hydrolase [Streptomyces sp. Tu6071]
Length = 202
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVG-----DA 71
PWL GLGNPG +Y G RHNVGF + D A G +A +G +G
Sbjct: 12 PWLVAGLGNPGPEYAGNRHNVGFMVADLLAARLGGRFKRAARAQAQVVEGRLGVPGVSST 71
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGL
Sbjct: 72 RVVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNGL 131
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ +D + + ++ L+++
Sbjct: 132 KSMTKAMGPAYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELDYFVDRAADAVEALVTQ 191
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 192 GLERAQGSYNS 202
>gi|403382802|ref|ZP_10924859.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JC66]
Length = 187
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
+GLGNPG Y TRHNVGF ID A GI ++ CKA G+G V V L KPQT
Sbjct: 4 LIGLGNPGAAYAKTRHNVGFMAIDQIAREWGIDVSQKKCKALIGEGNVRGTKVWLIKPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGES YYK+ L + V +DD+ P G RLR+ GG GGHNG+KS++
Sbjct: 64 YMNLSGESLRAFLDYYKIELENITVLYDDLDTPFGKFRLRYQGGAGGHNGIKSIIQHTGT 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
N R GI RP + ++L F+ + + L++ + +K L ++
Sbjct: 124 QVFNRIRIGISRPAPGYNIADYVLSPFSKEEFQSLPEVLEQIQKAVKYDLEHTFEQTMAA 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|365154887|ref|ZP_09351285.1| peptidyl-tRNA hydrolase [Bacillus smithii 7_3_47FAA]
gi|363628998|gb|EHL79691.1| peptidyl-tRNA hydrolase [Bacillus smithii 7_3_47FAA]
Length = 187
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG+KY+GTRHN+GF++ID A + T K + G +LL KP
Sbjct: 4 LIAGLGNPGEKYRGTRHNIGFDVIDELAHRLQSPLTTAKHKGIYTIVRSGGHQLLLLKPL 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMNLSGES + YYK+ + +LV +DD+ LP G +RLR G GGHNG+KSV+ +
Sbjct: 64 TYMNLSGESIAEVMRYYKIDIENLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSVIQHTG 123
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GIGRP G ++L KF+ R ++ A+++ + L K E
Sbjct: 124 TEQFKRIRIGIGRPDGNNTVIDYVLGKFDKEQRLIMNEAVKKSADACLEWLEKPFPEVMN 183
Query: 191 HFNT 194
FN+
Sbjct: 184 QFNS 187
>gi|350268690|ref|YP_004879998.1| peptidyl-tRNA hydrolase [Oscillibacter valericigenes Sjm18-20]
gi|348593532|dbj|BAK97492.1| peptidyl-tRNA hydrolase [Oscillibacter valericigenes Sjm18-20]
Length = 199
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 82/117 (70%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG+KY TRHN+GF +D AE Q + +N V K+ + G A VL+ KP
Sbjct: 12 WLLVGLGNPGEKYARTRHNMGFLTVDLLAEKQSVKLNKVKFKSAYNILRFGGARVLVMKP 71
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
QT+MNLSGE+ A +YK+P +RVLV +DD+ LP G LR+R +G GGHNG+K+++
Sbjct: 72 QTFMNLSGEAVHEAAQFYKIPADRVLVIYDDVSLPVGKLRVRPSGSAGGHNGIKNII 128
>gi|167629343|ref|YP_001679842.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
gi|167592083|gb|ABZ83831.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
Length = 225
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG +Y TRHN+GF ++D AE+ G + + V VLL KPQT
Sbjct: 31 IVGLGNPGLQYARTRHNIGFMVVDRLAEAWGAEGFRDRFQGLCSEARVEGEKVLLLKPQT 90
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
YMNLSG+S LA +YKL +LV +DDM L G LR R GG GGHNG+KS++
Sbjct: 91 YMNLSGQSVAALAVFYKLLPEDILVIYDDMDLKLGRLRARAKGGSGGHNGMKSIIGLLGT 150
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
GIGRP + A +L+ F +E + L +G E L + KG+ E
Sbjct: 151 EAFPRLKMGIGRPADRRLAAAHVLESFTEEEQETVRAMLDQGREAAALWVDKGIIEVMNR 210
Query: 192 FNT 194
FN
Sbjct: 211 FNA 213
>gi|336326183|ref|YP_004606149.1| peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
gi|336102165|gb|AEI09985.1| Peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
Length = 239
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 23/195 (11%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAF---------AESQGISMNTVHCKATFGQGFV 68
PWL VGLGNPGDKY TRHN G+ ++D + +Q N++ C Q +
Sbjct: 48 PWLIVGLGNPGDKYTTTRHNAGYLVVDELLADLLPAPGSLAQHRKTNSLIC-----QSRI 102
Query: 69 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
G+ PV+LA+P+TYMN SG LA ++K+P RV+V +D++ L +R+R GG GH
Sbjct: 103 GETPVILARPRTYMNESGAPVANLAKFFKVPAERVIVIYDELDLDPEKVRVRMGGGDHGH 162
Query: 129 NGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
NGL+S+ GIGRPPG+MD +++L+ F+ + A+ + + +
Sbjct: 163 NGLRSITKALGTKEYVRIALGIGRPPGRMDVASYVLKPFSKAENAWLPIAVADAADATRA 222
Query: 180 LLSKGLTESARHFNT 194
+ +G+ R+ +
Sbjct: 223 CVQQGVEAGMRYAES 237
>gi|110803012|ref|YP_699741.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
gi|119390928|sp|Q0SQ66.1|PTH_CLOPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110683513|gb|ABG86883.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
Length = 188
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 102/186 (54%), Gaps = 11/186 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF++ID A I +N K G+GF+ + V+L KP
Sbjct: 3 LIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES +YKL + ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 63 TYMNLSGESIREFVNFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G+P + +L KF+ RE I+ + + + ++ ES
Sbjct: 123 GDKFPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKESMN 180
Query: 191 HFNTIQ 196
FN +
Sbjct: 181 KFNGVN 186
>gi|334564775|ref|ZP_08517766.1| hypothetical protein CbovD2_09386 [Corynebacterium bovis DSM 20582]
Length = 218
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 113/209 (54%), Gaps = 34/209 (16%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAF---------AESQGISMNTVHCKATF---- 63
RPWL VGLGNPG+KY TRHNVG+ ++D + Q N++ C+
Sbjct: 10 RPWLIVGLGNPGEKYAATRHNVGYMVVDEILGDILPVPGSLKQHKRTNSLICETRVTASA 69
Query: 64 -------GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGV 116
PV+LA+ + YMNLSG + G LA+++++P +V+V HD++ L GV
Sbjct: 70 SGRAAGSAASAGDGVPVVLARSRGYMNLSGGAVGALASFFRVPPAQVVVVHDELDLDPGV 129
Query: 117 LRLRHNGGHGGHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERID 167
+R++ GG GHNGLKS GIGRPPG+MDP A++L+ F + +
Sbjct: 130 VRVKLGGGENGHNGLKSTTQALGTRDYVRVRVGIGRPPGRMDPAAYVLKPFTRAELDDLP 189
Query: 168 TALQEGVEVLKLLLSKGLTES-----ARH 191
+ + + ++L++++G+ + ARH
Sbjct: 190 VTVADAADAVRLVVTRGVEAAQNEIHARH 218
>gi|302519767|ref|ZP_07272109.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
gi|302428662|gb|EFL00478.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
Length = 267
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH------CKATFGQGFVGDA 71
PWL GLGNPG +Y G RHNVGF + D A G + G V
Sbjct: 12 PWLVAGLGNPGPEYAGNRHNVGFVVADLLAARLGGRFKRAARARAQVVEGRLGVPGVSST 71
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGL
Sbjct: 72 RVVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNGL 131
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ +D + + ++ L+++
Sbjct: 132 KSMTKAMGPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVTQ 191
Query: 184 GLTESARHFNT 194
GL + FN+
Sbjct: 192 GLERAQGSFNS 202
>gi|403670114|ref|ZP_10935280.1| peptidyl-tRNA hydrolase [Kurthia sp. JC8E]
Length = 187
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LF+GLGNPG +Y+ T HNVGF+ IDA A+ G+++N A + + V+L KP
Sbjct: 3 LFIGLGNPGKQYEHTHHNVGFDTIDALADKWGMTLNQEKFNAAYATAHRPEGKVMLMKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN+SGE+ P+ Y+ + + ++V +DDM L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNISGEAVRPMMDYFDIDVEDIVVIYDDMDLDKGKLRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
NF GI RPP M ++L +F+ + A + L K E
Sbjct: 123 TQNFNRVRVGISRPPQGMKVPDYVLSRFSKEEMPAMQEAFSTAADACAFFLEKPFAEVMN 182
Query: 191 HFN 193
+N
Sbjct: 183 KYN 185
>gi|455645250|gb|EMF24311.1| peptidyl-tRNA hydrolase [Streptomyces gancidicus BKS 13-15]
Length = 198
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 105/194 (54%), Gaps = 14/194 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDA-- 71
A PWL GLGNPG Y RHNVGF + D AE G +A +G +G A
Sbjct: 5 AAGPWLVAGLGNPGPGYAMNRHNVGFMVADLLAERMGGRFKRAAKAQAQVVEGRIGPAGP 64
Query: 72 ---PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
V+L KP +YMNLSG L +YK+P RV+ HD++ + G LRL+ GG GH
Sbjct: 65 GSRRVVLVKPMSYMNLSGGPVNALREFYKVPAQRVVAVHDELDIDYGTLRLKLGGGDNGH 124
Query: 129 NGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 180
NGLKS+ F GIGRPPG+M F+L+ F++ R+ +D + + ++ L
Sbjct: 125 NGLKSLTGAFGREYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRTADAVECL 184
Query: 181 LSKGLTESARHFNT 194
+++GL + +N+
Sbjct: 185 VTEGLERAQSAYNS 198
>gi|398309138|ref|ZP_10512612.1| peptidyl-tRNA hydrolase [Bacillus mojavensis RO-H-1]
Length = 188
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHNVGFMAIDQLSKEWNIELNQSKFNGLYGTGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLMDYYDVDNEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F+ I+ A++ V+ + LSK E
Sbjct: 123 TPEFDRIRIGIGRPVNGMKVVDYVLGAFSKDEAPAIEEAIERSVKACEASLSKPFLEVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 EFNA 186
>gi|408678666|ref|YP_006878493.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
gi|328882995|emb|CCA56234.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
Length = 198
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAES-QGISMNTVHCKATFGQGFVG-----DA 71
PWL VGLGNPG +Y RHN+GF ++D AE +G +A +G +G
Sbjct: 8 PWLIVGLGNPGPEYAANRHNIGFMVVDLLAERMRGSFKRAGKAQAQVVEGRMGPPGPASR 67
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP +YMNLSG L +YK+P V+ HD++ + GVLRL+ GG GHNGL
Sbjct: 68 RVILAKPMSYMNLSGGPVTALRDFYKVPTANVVAVHDELDIDYGVLRLKIGGGDNGHNGL 127
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ +D + + ++ L+++
Sbjct: 128 KSMTKAMGAEYHRVRCGIGRPPGRMQVADFVLKDFSSTERKDLDWFVDRAADSVECLVAE 187
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 188 GLERAQSAYNS 198
>gi|318061240|ref|ZP_07979961.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actG]
gi|318075755|ref|ZP_07983087.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actF]
Length = 202
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH------CKATFGQGFVGDA 71
PWL GLGNPG +Y G RHNVGF + D A G + G V
Sbjct: 12 PWLVAGLGNPGPEYAGNRHNVGFMVADLLAARLGGRFKRAARARAQVVEGRLGVPGVSST 71
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGL
Sbjct: 72 RVVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNGL 131
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ +D + + ++ L+++
Sbjct: 132 KSMTKAMGPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVTQ 191
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 192 GLERAQGSYNS 202
>gi|329925502|ref|ZP_08280376.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
gi|328939785|gb|EGG36125.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
Length = 187
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG Y+ TRHNVGF +DA AE G+ N CK+ +G +G +L KP
Sbjct: 3 WI-VGLGNPGPNYEKTRHNVGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T+MNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTFMNLSGEAVRAYMDYYKVSLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F RE++ ++E + L+ L ++
Sbjct: 122 GTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDALEFSLDHTFEQTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|302342166|ref|YP_003806695.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
gi|301638779|gb|ADK84101.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
Length = 200
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 9/193 (4%)
Query: 10 GFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG 69
G A A+ L VGLGNPG +Y TRHN GF +++ A G+ + ++ +G+G V
Sbjct: 3 GRARAEAQTALVVGLGNPGPRYATTRHNAGFMVVEELARRHGVGLVKSGHQSIWGKGLVE 62
Query: 70 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
PV+ A PQTYMNLSGE+ L +YY+LP +++V HDD+ L G L++ GG GH
Sbjct: 63 GRPVIAALPQTYMNLSGEAVAALLSYYRLPPTQLVVAHDDLDLELGRLKVAARGGAAGHK 122
Query: 130 GLKSVM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 180
G+ S++ + F G+GRP + F+L F A RE +Q + L+++
Sbjct: 123 GVGSIISLLGTDEFARLRFGVGRPRHDEPIEQFVLNGFYADQRELGQKMVQVAADCLEVI 182
Query: 181 LSKGLTESARHFN 193
L KGL E+ + F+
Sbjct: 183 LGKGLAEAMQRFH 195
>gi|329941175|ref|ZP_08290454.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
gi|329299706|gb|EGG43605.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
Length = 199
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 14/193 (7%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFA-ESQGISMNTVHCKATFGQGFVG----- 69
A PWL VGLGNPG +Y RHNVGF + D A + G +A +G +G
Sbjct: 7 AAPWLVVGLGNPGPEYAMNRHNVGFMVADLLAGRTGGRFKRAARTQAQVVEGRMGPPGPG 66
Query: 70 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
V+L KP +YMNLSG L +YK+PL+ V+ HD++ + GVLRL+ GG GHN
Sbjct: 67 SRRVVLVKPMSYMNLSGGPVNALREFYKVPLSHVVAVHDELDIDYGVLRLKRGGGDNGHN 126
Query: 130 GLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
GLKS+ GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 127 GLKSMTKAMGAEYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRAADAVECLV 186
Query: 182 SKGLTESARHFNT 194
++GL + +N+
Sbjct: 187 AEGLERAQNTYNS 199
>gi|238019603|ref|ZP_04600029.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
gi|237863801|gb|EEP65091.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
Length = 192
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T+HN+GF +IDA A+S + +A V VLL KPQ
Sbjct: 3 LVVGLGNPGKQYEATKHNIGFMVIDAIADSVPHTPWKEEQRAEVCSITVDGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
T+MN SGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 63 TFMNASGESVGPLMRYYKIDPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHIG 122
Query: 138 ------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
FR GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 123 TENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKGMN 182
Query: 191 HFN 193
FN
Sbjct: 183 LFN 185
>gi|20808916|ref|NP_624087.1| peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
gi|22095992|sp|Q8R757.1|PTH_THETN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|20517576|gb|AAM25691.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
Length = 185
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+GTRHNVGF +IDA ++ GI ++ + K+ G+G V+L KP
Sbjct: 2 YIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QT+MNLSGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 62 QTFMNLSGEALYDAVNFYKIPLENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSIIYLL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+F GIG+P D +L +F+ ++ ID A++ E + ++ G+ +
Sbjct: 122 NSEDFPRVRIGIGKPE-DGDLVRHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGIEHAM 180
Query: 190 RHFN 193
FN
Sbjct: 181 SRFN 184
>gi|417002113|ref|ZP_11941502.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479254|gb|EGC82350.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 193
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 9/187 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+ VGLGNPG KY+ TRHN GF ID A GI + K+ +GQG + V+L KP
Sbjct: 2 YCIVGLGNPGLKYENTRHNAGFLTIDYLANKFGIDVKKSKFKSLYGQGVISGQKVMLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMN SGE+ + +YK +++++V +DD+ + G +R+R G G HNG+KS++
Sbjct: 62 QTYMNNSGEAVREIINFYKFDIDKLIVIYDDIDIEFGTIRIRKKGSAGTHNGMKSIIYQI 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ +G+ P MD F+L F E I ++ + ++ ++ + S
Sbjct: 122 QDDKFPRIKIAVGKKPEYMDLANFVLSGFTEKEAEVIREEIKLASDSIETMIESSIDMSM 181
Query: 190 RHFNTIQ 196
FN+++
Sbjct: 182 NKFNSVK 188
>gi|375140499|ref|YP_005001148.1| peptidyl-tRNA hydrolase [Mycobacterium rhodesiae NBB3]
gi|359821120|gb|AEV73933.1| peptidyl-tRNA hydrolase [Mycobacterium rhodesiae NBB3]
Length = 192
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG +Y TRHN+GF + D A+ G S VH K A G + P
Sbjct: 1 MAEPQLVVGLGNPGPQYATTRHNLGFLVADILADRIG-SGFKVHKKSGAEVVTGQLAGRP 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG PLA +Y + ++V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVAPADIVVIHDELDIDFGRIRLKSGGGVAGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
S+ N F+ GIGRPPG+M+ AF+L F + + + T ++ + +LLLS+
Sbjct: 120 SLGSALGSNEFQRVRIGIGRPPGRMEGAAFVLGTFTSAEWKEVPTICEQAADATELLLSQ 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|325678539|ref|ZP_08158150.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
gi|324109758|gb|EGC03963.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
Length = 208
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 10/192 (5%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 72
T ++ VGLGNPG +Y G+RHN GF +DA + G S KA G +G
Sbjct: 17 TGTKPEYIIVGLGNPGIQYDGSRHNAGFITVDALEKKLGFSCERRKFKAKVGNTVIGGKN 76
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
L+ KP+T+MNLSG++ +YK+P+ V+V DD+ L G LR+R G GGHNG+K
Sbjct: 77 CLVMKPETFMNLSGDAVSEAMDFYKIPIENVIVIFDDISLEPGQLRIRRKGSAGGHNGIK 136
Query: 133 SVM-----NNF----RGIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
S++ +F G+G+ P D ++L +F+ R++ID A ++ + L+L+++
Sbjct: 137 SIIAQCGSEDFPRIKLGVGKKPNPAYDLAKWVLGRFSEDDRKKIDIAAEKACDALELMVN 196
Query: 183 KGLTESARHFNT 194
+ E+ FN+
Sbjct: 197 GKIDEAMSRFNS 208
>gi|441161197|ref|ZP_20967906.1| peptidyl-tRNA hydrolase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440616781|gb|ELQ79907.1| peptidyl-tRNA hydrolase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 197
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG- 69
T PWL GLGNPG +Y RHNVGF + D AE +A +G +G
Sbjct: 1 MTTDAEGPWLVAGLGNPGPEYAANRHNVGFMVADLLAERMRGRFKAHKARAQVVEGRIGP 60
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
V++AKP TYMNLSG L +YK+P+ ++ HD++ + G LRL+ GG
Sbjct: 61 PGPGSRRVVIAKPMTYMNLSGGPVTALRDFYKVPVGNIVAVHDELDIDYGALRLKLGGGD 120
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ + GIGRPPG+M F+L+ F+ R+ +D + + +
Sbjct: 121 NGHNGLKSITKSLGAEYHRVRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAV 180
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ GL + +N+
Sbjct: 181 EALIVDGLERAQSAYNS 197
>gi|229136898|ref|ZP_04265526.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
gi|228646563|gb|EEL02769.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
Length = 177
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 91/158 (57%), Gaps = 20/158 (12%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKPL 83
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 84 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLG 143
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDT 168
GI RP +K+N +R RI T
Sbjct: 144 TQEFQRIRMGIDRP-----------KKWNEGSRLRIRT 170
>gi|354585793|ref|ZP_09004624.1| peptidyl-tRNA hydrolase [Paenibacillus lactis 154]
gi|353184118|gb|EHB49646.1| peptidyl-tRNA hydrolase [Paenibacillus lactis 154]
Length = 187
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG Y+ TRHNVGF +DA AE G+ N CK+ +G +G +L KP
Sbjct: 3 WI-VGLGNPGPAYEKTRHNVGFMALDALAERHGMKFNQSKCKSVIAEGMIGGTKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T+MNLSGE+ YYK PL ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTFMNLSGEAVRAYMDYYKAPLEDMIVVYDDLDTAVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F RE++ + + + L+ L ++
Sbjct: 122 GTQTFNRVRMGISRPEPGYAIVDYVLGAFPKGEREQLQSMVDMTCDALEFSLDHTFEQTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|238917834|ref|YP_002931351.1| hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
gi|259535178|sp|C4Z4L5.1|PTH_EUBE2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238873194|gb|ACR72904.1| Hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
Length = 186
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y GTRHN GF +ID A+ IS++T K G+G + V+L KP
Sbjct: 2 YIIAGLGNPGKEYMGTRHNAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SGE + YYK ++ LV DD+ L G LRLR G GGHNG+KS++
Sbjct: 62 MTYMNNSGECIREVMDYYKCDIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIAHL 121
Query: 136 --NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ F+ G+G P D ++L KF A + A ++ E ++ +L+ G+
Sbjct: 122 GSDKFKRIKFGVGDKPKNWDLADWVLGKFPAEEYATLREANKKACEAVECILTDGIESGM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|261403913|ref|YP_003240154.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
gi|261280376|gb|ACX62347.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
Length = 187
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG Y+ TRHNVGF +DA AE G+ N CK+ +G +G +L KP
Sbjct: 3 WI-VGLGNPGPNYEKTRHNVGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T+MNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTFMNLSGEAVRAYMDYYKVSLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F RE++ ++E + L+ L ++
Sbjct: 122 GTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDALEFSLGHTFEQTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|253681331|ref|ZP_04862129.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|416348999|ref|ZP_11680559.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Stockholm]
gi|253562569|gb|EES92020.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|338196606|gb|EGO88792.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Stockholm]
Length = 190
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 105/184 (57%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHNVGF++ID AE I +N K +G G + V+L KP
Sbjct: 2 FLIVGLGNPGKEYEHTRHNVGFDVIDLLAEKHNIELNRKKFKGMYGDGNIAGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +YK+ ++V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 62 LTYMNLSGESVREIMDFYKITNEDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P + + + +L KF +++ + + +++++ KG E+
Sbjct: 122 NNDYFSRVKVGVGQPV-KTNLVSHVLGKFEKEDECKLNKTFEAACKAVQIIIEKGTAEAM 180
Query: 190 RHFN 193
FN
Sbjct: 181 NKFN 184
>gi|256389403|ref|YP_003110967.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
gi|256355629|gb|ACU69126.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
Length = 198
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 104/181 (57%), Gaps = 11/181 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF--VGDAPVLLA 76
WL GLGNPG Y G RHN GF ++D A G + +A +G VG V+LA
Sbjct: 11 WLIAGLGNPGPGYAGNRHNAGFMVVDLLAARVGGKFKSHKARADVVEGRLGVGGPRVVLA 70
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP+T+MNLSG L +YK+ +++ HD++ + GVLRL+ GG GHNGL+S+ +
Sbjct: 71 KPKTFMNLSGGPVKALRDFYKIEPAQIIAVHDELDVDYGVLRLKLGGGDNGHNGLRSITS 130
Query: 137 NFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ G+GRPPG+ DP F+L+ F++ ++ +D + + ++ L+ +GL E
Sbjct: 131 SLGTKEYHRVRFGVGRPPGRQDPADFVLKDFSSTEKKDLDYNVDRAADAVEDLIRRGLVE 190
Query: 188 S 188
+
Sbjct: 191 A 191
>gi|150388005|ref|YP_001318054.1| peptidyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
gi|167011987|sp|A6TJM7.1|PTH_ALKMQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149947867|gb|ABR46395.1| Aminoacyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
Length = 185
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 106/184 (57%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY GTRHNVGF++ID A GI++N + KA +G+ +G V+LAKP
Sbjct: 2 YIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES + +YK+ ++V +DD+ + G LR+R +G G HNG+KS +
Sbjct: 62 QTFMNLSGESIREMMQFYKIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ G+GRP D ++L F + +L+ ++ ++ G+ ++
Sbjct: 122 QTDAFPRIRIGVGRPEFG-DLSNYVLGSFTKDEIPLMKESLERATLTVESIVIDGIDKAM 180
Query: 190 RHFN 193
+N
Sbjct: 181 NRYN 184
>gi|427394339|ref|ZP_18887776.1| peptidyl-tRNA hydrolase [Alloiococcus otitis ATCC 51267]
gi|425730028|gb|EKU92875.1| peptidyl-tRNA hydrolase [Alloiococcus otitis ATCC 51267]
Length = 187
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 92/149 (61%), Gaps = 10/149 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPGDKY+ T+HN+GF +D A G++ N ++ + +G +G V L KPQ
Sbjct: 3 LIFGLGNPGDKYRSTKHNIGFITLDEIAFQMGLAFNKSQFQSVYAEGRMGSEKVFLIKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T+MNLSG+S P YY L + ++V HDD+ L G +RLR GGHGGHNGL+S++
Sbjct: 63 TFMNLSGQSVRPWLDYYDLDEGSDMVVVHDDLDLAVGRVRLRDQGGHGGHNGLRSIIKET 122
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKF 158
N + GIGRP G+M + +L KF
Sbjct: 123 GSKKFNRIKIGIGRPKGKMSVVSHVLSKF 151
>gi|86605936|ref|YP_474699.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
gi|119391024|sp|Q2JV16.1|PTH_SYNJA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86554478|gb|ABC99436.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
Length = 225
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG +Y TRHN GF ++D AE GI + + ++G+GF L KP
Sbjct: 16 LIVGLGNPGPQYANTRHNCGFMVVDQLAERWGIPLALEKRFQGSYGEGFALGGKRRLLKP 75
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+TYMN SGE+ + +YKL VLV +DDM LP G LRLR +G GGHNG+KSV+ +
Sbjct: 76 ETYMNRSGEAVRAVLDWYKLDPASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSVIEHL 135
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+GRP G D +L F + +D L+ V ++ L +GL +
Sbjct: 136 GSEAFPRLRLGVGRPKGNQDRVGHVLGSFEPAEQAVLDRVLRAAVAAVECCLQEGLKTAM 195
Query: 190 RHFNTIQKYKHIRLQNMPA 208
FN + + Q+ PA
Sbjct: 196 NRFNPLD-FSGPDRQDQPA 213
>gi|384263684|ref|YP_005419391.1| peptidyl-tRNA hydrolase SpoVC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387896579|ref|YP_006326875.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens Y2]
gi|380497037|emb|CCG48075.1| peptidyl-tRNA hydrolase SpoVC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387170689|gb|AFJ60150.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens Y2]
Length = 188
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP G M ++L F I+ A+ + V+ + L+K E
Sbjct: 123 TPEFDRVRIGIGRPAGGMKVVDYVLGAFTKEELPNINDAVSKTVKACEASLTKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|339006645|ref|ZP_08639220.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus LMG 15441]
gi|421874172|ref|ZP_16305779.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus GI-9]
gi|338775854|gb|EGP35382.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus LMG 15441]
gi|372456827|emb|CCF15328.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus GI-9]
Length = 190
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 95/165 (57%), Gaps = 9/165 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG +Y+ TRHNVGF ID ++ I ++T+ + G+G V VLL KPQ
Sbjct: 3 VIIGLGNPGKQYEDTRHNVGFLAIDTLSKELQIPLSTMKFRGIIGEGNVQGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE+ G + ++YKL ++V +DD+ LP G LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGETVGQIVSFYKLTAKDIVVIYDDLDLPVGKLRLREKGSAGGHNGIKSIIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
+F GI RP ++L F+ I A+Q +
Sbjct: 123 TQDFSRIKIGIDRPEPGKSVSDYVLHSFSKSEWPHIQDAIQSAAK 167
>gi|395772729|ref|ZP_10453244.1| peptidyl-tRNA hydrolase [Streptomyces acidiscabies 84-104]
Length = 199
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 16/192 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAP---- 72
PWL VGLGNPG +Y RHN+GF + D AE G +A +G +G AP
Sbjct: 9 PWLIVGLGNPGPEYAMNRHNIGFMVADLLAERMGGRFKRAGKAQAQVLEGRLG-APGPAS 67
Query: 73 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
+LAKP ++MNLSG L +YK+PL+ ++ HD++ + G LRL+ GG GHNG
Sbjct: 68 RRAVLAKPMSFMNLSGGPVNALRDFYKVPLSNIVAIHDELDIDYGTLRLKLGGGDNGHNG 127
Query: 131 LKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
LKS+ + GIGRPPG+M F+L+ F++ R+ +D + + ++ L++
Sbjct: 128 LKSMTKSMGPDYHRIRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVEALVT 187
Query: 183 KGLTESARHFNT 194
+GL + + +N+
Sbjct: 188 EGLERAQQSYNS 199
>gi|345858300|ref|ZP_08810697.1| peptidyl-tRNA hydrolase [Desulfosporosinus sp. OT]
gi|344328616|gb|EGW39997.1| peptidyl-tRNA hydrolase [Desulfosporosinus sp. OT]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 13/187 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GF +ID AE+ + T + + +G V ++L KPQ
Sbjct: 3 VIVGLGNPGPQYAETRHNIGFLLIDLLAEAYNLQFRT-KFQGLWTEGNVEGERLILLKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S L +YK+ +L+ HDDM LP G +RLR GG GGHNG++S++ +
Sbjct: 62 TFMNLSGRSVSELTNFYKVLGGDLLIVHDDMDLPLGKIRLRDQGGAGGHNGIRSILAEYG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+GRPP + DP ++L F ++D L+ +V L + KG ES R
Sbjct: 122 SEKFWRLKLGVGRPPREWDPARYVLSPFAEDELTQLDDLLERAEKVTNLWI-KG--ESGR 178
Query: 191 HFNTIQK 197
N +
Sbjct: 179 AMNLYHR 185
>gi|375091417|ref|ZP_09737710.1| peptidyl-tRNA hydrolase [Helcococcus kunzii ATCC 51366]
gi|374563517|gb|EHR34830.1| peptidyl-tRNA hydrolase [Helcococcus kunzii ATCC 51366]
Length = 191
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 9/187 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHNVGF++ID A+ G+ ++ + K ++ Q + ++L KP
Sbjct: 2 YLIVGLGNPGRQYEKTRHNVGFDVIDKLADHFGVKLDKLKFKGSYAQVRYENEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
+T+MN SGES P Y+ + ++V DD+ + G +R+R NG G HNGLKSV+N
Sbjct: 62 ETFMNASGESVQPFMNYFGIEPENLIVIVDDIDIKFGTVRIRANGSAGTHNGLKSVINRI 121
Query: 137 ---NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
NF + + P MD F+L KF R+ +D ++ + + +L + +
Sbjct: 122 NNKNFTRIKLAVNQKPTYMDLADFVLSKFTDSERKIVDKEVELAKDAVLEILKSDVNTAM 181
Query: 190 RHFNTIQ 196
N+I+
Sbjct: 182 NKINSIE 188
>gi|172040258|ref|YP_001799972.1| hypothetical protein cur_0578 [Corynebacterium urealyticum DSM
7109]
gi|448823229|ref|YP_007416394.1| peptidyl-tRNA hydrolase [Corynebacterium urealyticum DSM 7111]
gi|171851562|emb|CAQ04538.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
gi|448276726|gb|AGE36150.1| peptidyl-tRNA hydrolase [Corynebacterium urealyticum DSM 7111]
Length = 215
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGF----EMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
PWL VGLGNPG +Y+ TRHN+G+ E++D G + Q + V
Sbjct: 23 PWLVVGLGNPGAQYETTRHNIGYLAVDELLDDLTPMPGTLSAHKRTNSLICQTKIDGRSV 82
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
++A+ ++YMNLSG + G LA ++K+P V+V HD++ L +R++ GG GHNGLKS
Sbjct: 83 IIARARSYMNLSGGAIGALAKFFKIPAEHVIVIHDELDLDPAAVRIKVGGGENGHNGLKS 142
Query: 134 VMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
GIGRPPG+MDP +F+L+ F+ E + +L + + ++L +S+G
Sbjct: 143 TTQALGTRDYVRIRMGIGRPPGRMDPASFVLKPFSKQELEWLPLSLGDAADAVRLTVSRG 202
Query: 185 L 185
+
Sbjct: 203 V 203
>gi|357018984|ref|ZP_09081244.1| peptidyl-tRNA hydrolase [Mycobacterium thermoresistibile ATCC
19527]
gi|356481305|gb|EHI14413.1| peptidyl-tRNA hydrolase [Mycobacterium thermoresistibile ATCC
19527]
Length = 197
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 105/195 (53%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
A P L VGLGNPG +Y GTRHN+GF + D A G VH K A G + P
Sbjct: 7 AAGPRLIVGLGNPGPRYAGTRHNLGFMVADILAGRMGEKFK-VHKKSGAEVITGRLAGRP 65
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y + ++V HD++ L G +RL+ GG GHNGL+
Sbjct: 66 VILAKPRCYMNESGRQVGPLAKFYSVAPADIVVIHDELDLEFGRIRLKFGGGVAGHNGLR 125
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV F GIGRPPG+ ++LQ F+A R + T ++ +LLL
Sbjct: 126 SVSAALGTQEFHRVRIGIGRPPGRKSAADYVLQNFSAAERGEVPTICEQAAHATELLLEH 185
Query: 184 GLTESARHFNTIQKY 198
GL + NT+ +
Sbjct: 186 GLEPAQ---NTVHAW 197
>gi|443626834|ref|ZP_21111244.1| putative Peptidyl-tRNA hydrolase [Streptomyces viridochromogenes
Tue57]
gi|443339688|gb|ELS53920.1| putative Peptidyl-tRNA hydrolase [Streptomyces viridochromogenes
Tue57]
Length = 200
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T + PWL GLGNPG Y RHNVGF ++D AE G +A +G +G
Sbjct: 4 TTDPSAPWLIAGLGNPGPDYARNRHNVGFMVVDLLAERIGGRFKRAGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V+LAKP +YMNLSG G L +YK+P+ ++ HD++ + G LRL+ GG
Sbjct: 64 PGPLNRRVILAKPMSYMNLSGGPVGALRDFYKVPVGNIVAVHDELDIDFGTLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ GIGRPPG+M F+L+ F++ R+ +D + + +
Sbjct: 124 NGHNGLKSMTKAMGSDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 ECLVIEGLERAQSTYNS 200
>gi|363890536|ref|ZP_09317863.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM5]
gi|363892231|ref|ZP_09319399.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM2]
gi|361964181|gb|EHL17225.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM2]
gi|361964912|gb|EHL17912.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM5]
Length = 187
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ T+HNVGF ID ++ I ++ + KA G+G ++L KP
Sbjct: 2 YIIVGLGNPGLKYQNTKHNVGFMAIDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
QT+MNLSGES + ++YK+ + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 62 QTFMNLSGESVQQIMSFYKVEHQNLFVLYDDIDIDVGKLRIRQKGSSGTHNGMKNIIYLL 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR G+ +PP MD +++L F + + L + E + KGL +S
Sbjct: 122 GYDDFPRFRIGVSKPPQYMDLASYVLSNFTSEETNILSDVLDKCSEACLYAIEKGLDKSM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|227832719|ref|YP_002834426.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453735|gb|ACP32488.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 182
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 13/180 (7%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGD 70
+ + P+L VGLGNPG KY GTRHN+GF++ D A S +VH K + GD
Sbjct: 3 SVTSSPFLVVGLGNPGPKYTGTRHNIGFDVADELAHELFASF-SVHKKTNTDVAEARRGD 61
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
A V++AKP+++MNLSG LA Y+ +P + ++V HD++ L ++ R GG GHNG
Sbjct: 62 AKVIVAKPRSFMNLSGGPIKALAQYFNVPHDHIIVVHDELELDFATIKRRLGGGDHGHNG 121
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLL 180
L+S + GIGRPPG+MDP AF+L+ +N + I + V E+L+ L
Sbjct: 122 LRSTTKSLGTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEILRAL 181
>gi|348176914|ref|ZP_08883808.1| peptidyl-tRNA hydrolase [Saccharopolyspora spinosa NRRL 18395]
Length = 191
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y G RHN+GF + D A+ G A +G + A +L KP+
Sbjct: 9 LIVGLGNPGPRYAGNRHNIGFLVADELADRIGGKFKAHKAGAEVVEGRLAGARAVLVKPR 68
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
++MNLSG +YK P ++V HD++ LP G +RL+ GG GHNGL+S+ +
Sbjct: 69 SFMNLSGGPVAGAVKFYKAPPESLIVIHDELDLPFGTIRLKRGGGENGHNGLRSISKSLG 128
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+MDP ++L+ F+ R+ + + + ++ L++KGL +
Sbjct: 129 TRDYVRVRFGIGRPPGRMDPADYVLKDFSGTERKELAYFIDVCADAVEALVTKGLEAAQN 188
Query: 191 HFN 193
F+
Sbjct: 189 QFH 191
>gi|374578788|ref|ZP_09651882.1| peptidyl-tRNA hydrolase [Desulfosporosinus youngiae DSM 17734]
gi|374414870|gb|EHQ87305.1| peptidyl-tRNA hydrolase [Desulfosporosinus youngiae DSM 17734]
Length = 185
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHNVGF ++D AE + + + G+V +LL KPQ
Sbjct: 3 VIVGLGNPGSQYSETRHNVGFLLVDLLAEVHKLQFRS-KFQGLLADGYVEGERLLLLKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S L +YK+ +L+ DDM LP G LRLR GG GGHNG+KS+
Sbjct: 62 TFMNLSGRSVIELIHFYKVAQENILIVQDDMDLPLGKLRLRDQGGSGGHNGIKSIQAELG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+GRPP D ++L F E +D AL+ + + L + KG TE A
Sbjct: 122 SEKIWRLKMGVGRPPKDWDSARYVLAPFAEGELELLDGALERAEKAVYLWI-KGETERA 179
>gi|300115102|ref|YP_003761677.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
gi|299541039|gb|ADJ29356.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
Length = 193
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 25/194 (12%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP-- 72
A WL +GLGNPG +Y TRHN GF +DA A GI G F GD
Sbjct: 2 AATAWLLIGLGNPGIEYAQTRHNAGFWWLDAVASELGIDFKP-------GAKFFGDYARA 54
Query: 73 ------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHG 126
+ L KP T+MN SG++ L YY++PL R+L+ HDD+ LP G+ +L+ GGHG
Sbjct: 55 HWRGHDLWLLKPTTFMNRSGQAVLALLNYYQIPLERLLIAHDDLDLPPGIAKLKRTGGHG 114
Query: 127 GHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGL+ ++N G+G P D +++L + + R+ I+TA+ G EVL
Sbjct: 115 GHNGLRDIINRLGRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIETAIGAGFEVL 174
Query: 178 KLLLSKGLTESARH 191
+L+ G TE A H
Sbjct: 175 PEVLA-GDTEKAMH 187
>gi|357412970|ref|YP_004924706.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
gi|320010339|gb|ADW05189.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
Length = 197
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----DA 71
PWL VGLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 7 PWLIVGLGNPGPEYAANRHNVGFMVADLLAERMGGKFKRAQKAQAQVLEGRIGPPGPASR 66
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP +YMNLSG L +YK+P + V+ HD++ + G+LRL+ GG GHNGL
Sbjct: 67 RVVLAKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDIDFGMLRLKLGGGDNGHNGL 126
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ + + + ++ LL++
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELAYLVDRSADAVESLLAE 186
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 187 GLERAQSAYNS 197
>gi|10802611|gb|AAG23529.1|AF244580_1 peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans]
Length = 186
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 10/179 (5%)
Query: 24 LGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMN 83
+GNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL KPQTYMN
Sbjct: 6 IGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMN 65
Query: 84 LSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF----- 138
LSG + ++YKLPL+R++V +DD+ LP G + LR G GGH G+ S+++
Sbjct: 66 LSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKICLRLKGSAGGHRGMGSIISCLGSEEI 125
Query: 139 ----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 193
GIGR P D K ++LQ F RE ++ L+ E + + L++G ++ FN
Sbjct: 126 PRLKIGIGR-PAVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDFN 183
>gi|452990576|emb|CCQ98195.1| peptidyl-tRNA hydrolase [Clostridium ultunense Esp]
Length = 189
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG++Y+ TRHN+GF+++D A+ I M +A G+ +LL KP T
Sbjct: 4 IVGLGNPGEEYEKTRHNIGFQVVDLLAKEWSIPMRASKWQALIGEAKKEGERILLTKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
YMN SG++ + +YKL + +LV +DD+ LP G LRLR G GGHNG+KS++
Sbjct: 64 YMNRSGDAVRKIMDWYKLSCDDLLVIYDDLDLPVGNLRLREKGSAGGHNGMKSIIQQLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
GIG PP ++L F +E++D ++ + LS +
Sbjct: 124 EQFKRIRVGIGHPPAGASVPEYVLSPFEKEEKEKVDAGIKLAAQAANAWLSLPFPQVMNR 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|337751798|ref|YP_004645960.1| protein Pth [Paenibacillus mucilaginosus KNP414]
gi|336302987|gb|AEI46090.1| Pth [Paenibacillus mucilaginosus KNP414]
Length = 186
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
FVGLGNPG +Y+ TRHN+G+ +D FA+ GI ++ CK G+G V V L KPQT
Sbjct: 4 FVGLGNPGRQYEATRHNIGWMALDRFADKHGIQISQNKCKGLLGEGHVAGQKVYLLKPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
+MNLSGES +YK L ++V +DDM P G +RLR+ G GGHNG+KS + +
Sbjct: 64 FMNLSGESIRAFMDFYKASLEDLVVIYDDMDTPFGSIRLRYQGSAGGHNGIKSTIQHLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
GI RP + ++L F+ + I L E ++ LL ++
Sbjct: 124 QSFQRIRMGISRPLPGRNIADYVLSTFSKEEVQGIPPVLDRTCEAMEHLLQHPFEKTMAV 183
Query: 192 FNT 194
FN
Sbjct: 184 FNV 186
>gi|350546384|ref|ZP_08915773.1| peptidyl-tRNA hydrolase [Mycoplasma iowae 695]
gi|349504038|gb|EGZ31592.1| peptidyl-tRNA hydrolase [Mycoplasma iowae 695]
Length = 189
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ T+HNVGF +ID+ + IS+ T F + + + V + KP
Sbjct: 4 YLVVGLGNPGFQYENTKHNVGFNVIDSLCKKINISLLTSKFNGVFSKANLYNKEVYICKP 63
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGE +YK+P+ VLV +DD+ G ++L+ G GG NG+K+++N
Sbjct: 64 QTYMNLSGEFVSKFVNFYKIPIENVLVIYDDLDSEIGKIKLKTKGSSGGQNGIKNIINLL 123
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GI RP + ++L KFN + +++ ++ + + + L T++
Sbjct: 124 GTESIKRIKIGISRPERNISISGYVLSKFNNEDKTKVEKSIDKASDAILFYLENDFTQAM 183
Query: 190 RHFN 193
FN
Sbjct: 184 NKFN 187
>gi|326390844|ref|ZP_08212396.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
gi|325993103|gb|EGD51543.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
Length = 184
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+GTRHN+GF +ID A+ G+++ + K+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGKEYEGTRHNIGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+KS++
Sbjct: 62 QTFMNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRTKGSSGGHNGMKSIIYLL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D + +L KF ++ ID A+ + + + ++ G+ S
Sbjct: 122 NSEEFPRVRIGIGKP--QEDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHSM 179
Query: 190 RHFN 193
FN
Sbjct: 180 SKFN 183
>gi|379724736|ref|YP_005316867.1| protein Pth [Paenibacillus mucilaginosus 3016]
gi|386727490|ref|YP_006193816.1| protein Pth [Paenibacillus mucilaginosus K02]
gi|378573408|gb|AFC33718.1| Pth [Paenibacillus mucilaginosus 3016]
gi|384094615|gb|AFH66051.1| protein Pth [Paenibacillus mucilaginosus K02]
Length = 186
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
FVGLGNPG +Y+ TRHN+G+ +D FA+ GI ++ CK G+G V V L KPQT
Sbjct: 4 FVGLGNPGRQYEATRHNIGWMALDRFADKHGIQISQNKCKGLLGEGHVAGQKVYLLKPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
+MNLSGES +YK L ++V +DDM P G +RLR+ G GGHNG+KS + +
Sbjct: 64 FMNLSGESIRAFMDFYKASLEDLVVIYDDMDTPFGSIRLRYQGSAGGHNGIKSTIQHLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
GI RP + ++L F+ + I L E ++ LL ++
Sbjct: 124 QSFQRIRMGISRPLPGRNIADYVLSTFSKEEVQGIPPVLDRTCEAMEHLLQHPFEKTMAV 183
Query: 192 FNT 194
FN
Sbjct: 184 FNA 186
>gi|218197382|gb|EEC79809.1| hypothetical protein OsI_21248 [Oryza sativa Indica Group]
gi|222632792|gb|EEE64924.1| hypothetical protein OsJ_19784 [Oryza sativa Japonica Group]
Length = 125
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 86/121 (71%), Gaps = 13/121 (10%)
Query: 78 PQTYMNLS--GES---TGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG-- 130
P +NL+ GE+ GPLAAYYKLPLNRVLV D LPCG+LRL+ GG G HNG
Sbjct: 5 PTFILNLAKLGEAKTQVGPLAAYYKLPLNRVLVAFDGTDLPCGILRLQPKGGFGRHNGSV 64
Query: 131 ------LKSVMNNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
V+ + +GIG PPGQMDPKAF+LQKFN + ERID+A++EGVE+LKL+++KG
Sbjct: 65 DFVTMCFNEVICHSKGIGCPPGQMDPKAFVLQKFNKTSLERIDSAIEEGVEILKLVVTKG 124
Query: 185 L 185
L
Sbjct: 125 L 125
>gi|262182792|ref|ZP_06042213.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 179
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 13/178 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAP 72
+ P+L VGLGNPG KY GTRHN+GF++ D A S +VH K + GDA
Sbjct: 2 TSSPFLVVGLGNPGPKYTGTRHNIGFDVADELAHELFASF-SVHKKTNTDVAEARRGDAK 60
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V++AKP+++MNLSG LA Y+ +P + ++V HD++ L ++ R GG GHNGL+
Sbjct: 61 VIVAKPRSFMNLSGGPIKALAQYFNVPHDHIIVVHDELELDFATIKRRLGGGDHGHNGLR 120
Query: 133 SVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLL 180
S + GIGRPPG+MDP AF+L+ +N + I + V E+L+ L
Sbjct: 121 STTKSLGTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEILRAL 178
>gi|386385802|ref|ZP_10071045.1| peptidyl-tRNA hydrolase [Streptomyces tsukubaensis NRRL18488]
gi|385666740|gb|EIF90240.1| peptidyl-tRNA hydrolase [Streptomyces tsukubaensis NRRL18488]
Length = 203
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH------CKATFGQGFVGDA 71
PWL VGLGNPG Y RHNVGF + D A+ G S + G G
Sbjct: 13 PWLIVGLGNPGPGYAANRHNVGFMVADLLADRIGGSFKRGQKAQAQIVEGRLGSPGPGSR 72
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP +YMNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGL
Sbjct: 73 RVVLAKPMSYMNLSGGPVTALRDFYKIPVANIVAVHDELDIDYGVLRLKIGGGDNGHNGL 132
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ + GIGRPPG+M F+L+ F+ R+ +D + + ++ L+ +
Sbjct: 133 KSITKSLGPEYHRVRFGIGRPPGRMPVADFVLKDFSGAERKELDYFVDRAADAVEALVIE 192
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 193 GLERAQSTYNS 203
>gi|307150148|ref|YP_003885532.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
gi|306980376|gb|ADN12257.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
Length = 210
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 111/198 (56%), Gaps = 11/198 (5%)
Query: 7 LRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIS-MNTVHCKATFGQ 65
+ +G + + P L +GLGNP KY+ TRHN+GFE +D A+S +S + F +
Sbjct: 1 MAKGNSSEIIIPQLIIGLGNPEQKYEKTRHNIGFEAVDVLAKSWQLSWQQNKRFQGLFTE 60
Query: 66 GF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 124
G D + L KP TYMN SGES + +YKLP +LV +DDM LP G +RLR +G
Sbjct: 61 GMGASDKKIRLLKPLTYMNRSGESVRAVLDWYKLPPESILVIYDDMDLPLGRIRLRLSGS 120
Query: 125 HGGHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
GGHNG+KS++++ GIG+ G+ + + +L +F+A E I LQ +
Sbjct: 121 AGGHNGIKSIISHVGSQDFPRLRIGIGKSNGKKETISHVLGRFSADETEVIAKILQLVEQ 180
Query: 176 VLKLLLSKGLTESARHFN 193
+K + +G+ ++ +N
Sbjct: 181 TVKTSMKEGIEKAMSLYN 198
>gi|406987407|gb|EKE07767.1| hypothetical protein ACD_17C00525G0003 [uncultured bacterium]
Length = 202
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 103/189 (54%), Gaps = 11/189 (5%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPV 73
++ WL VGLGN G Y TRHNVGFE +D A +S + K +G +G A V
Sbjct: 1 MSHEWLVVGLGNLGSFYDETRHNVGFEALDLLARKYNLSFQSKSDLKGLIAKGTLGGASV 60
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
L+ KPQTYMNLSG + + YYK+ L+R+LV DD +P G LR+R N GGHNGLKS
Sbjct: 61 LMLKPQTYMNLSGHAVVAVMNYYKIELSRLLVLADDAAIPFGELRIRANSSSGGHNGLKS 120
Query: 134 VMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
V G+G P D ++L +F+ ++ + L V+ +++ L KG
Sbjct: 121 VEEAIHTDGYARLRIGVGSPEAG-DLSDYVLGQFSKEEKKLLPEILGRVVQAVEIWLDKG 179
Query: 185 LTESARHFN 193
LT + + N
Sbjct: 180 LTSAMNYAN 188
>gi|387131036|ref|YP_006293926.1| peptidyl-tRNA hydrolase [Methylophaga sp. JAM7]
gi|386272325|gb|AFJ03239.1| Peptidyl-tRNA hydrolase [Methylophaga sp. JAM7]
Length = 191
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 15/183 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAK 77
W+ VGLGNPG +Y+ TRHNVGF M+D FAE G+S T + + Q + A L K
Sbjct: 4 WIIVGLGNPGSQYEHTRHNVGFWMLDQFAEQAGLSFKTDNRFQGELVQQIMPQAKFWLLK 63
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P T+MN SG+S LA +YK+P R++V HD++ LP G +RL+ +GGHGGHNGL+ ++
Sbjct: 64 PLTFMNRSGQSVAALANFYKIPPERIVVLHDELDLPTGTVRLKKSGGHGGHNGLRDIIAQ 123
Query: 138 F----------RGIGRPPGQMDPKAFLLQKFNAIARER----IDTALQEGVEVLKLLLSK 183
GIG P ++L + + R++ ID A+Q +V L K
Sbjct: 124 LGGQKDFLRCRIGIGHPGNSRQVSDYVLSRPSPDDRQQIMHGIDAAIQALPDVFNNQLDK 183
Query: 184 GLT 186
+
Sbjct: 184 AMN 186
>gi|374605014|ref|ZP_09677959.1| peptidyl-tRNA hydrolase [Paenibacillus dendritiformis C454]
gi|374389399|gb|EHQ60776.1| peptidyl-tRNA hydrolase [Paenibacillus dendritiformis C454]
Length = 186
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y TRHN+GF +D AE I + CKA G+G VG ++L KP
Sbjct: 3 WI-VGLGNPGMQYASTRHNIGFMAVDRLAERHQIQVRDSKCKALVGEGRVGTEKIVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGE+ YYK ++V +DDM G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGEAVRAYMDYYKADPADLIVLYDDMDTELGKVRLRYQGSSGGHNGIKSLIQHL 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP + ++L F R++++ A+ + + ++ L+ ++
Sbjct: 122 GTQTFNRVRMGISRPQPGREIVDYVLSPFAKAERDKLEEAIDKTCDAVEFALTHPFDQTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|294813077|ref|ZP_06771720.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|294325676|gb|EFG07319.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 212
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG-----DA 71
PWL VGLGNPG Y RHNVGF + D AE G + +A +G +G
Sbjct: 22 PWLIVGLGNPGPGYAANRHNVGFMVADLLAERVGGAFKRAPKAQAQVVEGRIGPPGPASR 81
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP ++MNLSG L +YK+P R++ HD++ + G LRL+ GG GHNGL
Sbjct: 82 RVVLAKPMSFMNLSGGPVVALRDFYKVPTERIVAIHDELDIDYGTLRLKLGGGDNGHNGL 141
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F+ R+ +D + + ++ L+++
Sbjct: 142 KSMTKAMGPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEALVTE 201
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 202 GLERAQSAYNS 212
>gi|326790210|ref|YP_004308031.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
gi|326540974|gb|ADZ82833.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
Length = 190
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GFE+ID+ AE+ I + KA G+ + V+L KPQ
Sbjct: 3 LIVGLGNPGLQYAATRHNIGFEVIDSLAEAYNIQVTKSKYKALIGEANIKGERVILMKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE+ ++K+ V V DD+ L G LRLR NG GGHNG+KS++
Sbjct: 63 TYMNLSGEAVRACMDFHKITNEEVFVIFDDVSLEVGQLRLRKNGSAGGHNGIKSIIAHIG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F G+G P D ++L +F+ + I ++ V+ + ++ G+ ++
Sbjct: 123 TQDFSRLKFGVGEKPAGWDLANYVLGRFSEDDLKIIGPRFKDAVDATTMFVTDGIDKAMN 182
Query: 191 HFN 193
+N
Sbjct: 183 KYN 185
>gi|402570690|ref|YP_006620033.1| peptidyl-tRNA hydrolase [Desulfosporosinus meridiei DSM 13257]
gi|402251887|gb|AFQ42162.1| peptidyl-tRNA hydrolase [Desulfosporosinus meridiei DSM 13257]
Length = 185
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG +Y+ TRHN+GF +ID AE + + + +G + + L KPQ
Sbjct: 3 VIMGLGNPGVQYEETRHNIGFLLIDLIAEVHNLQFRS-KFQGLVAEGQIEGERLFLLKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S L +YK+PL+ +L+ DDM LP G LRLR G GGHNG+KS+
Sbjct: 62 TFMNLSGRSVAELIKFYKIPLDDLLIVQDDMDLPLGKLRLRDQGSAGGHNGIKSIQGELG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
G+GRPP + DP ++L F+ + +D L+
Sbjct: 122 SEKLWRLKLGVGRPPKEWDPARYVLAPFSDDESQMLDDVLE 162
>gi|402838558|ref|ZP_10887063.1| aminoacyl-tRNA hydrolase [Eubacteriaceae bacterium OBRC8]
gi|402272772|gb|EJU21988.1| aminoacyl-tRNA hydrolase [Eubacteriaceae bacterium OBRC8]
Length = 187
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ T+HNVGF ID ++ I ++ + KA G+G ++L KP
Sbjct: 2 YIIVGLGNPGLKYQNTKHNVGFMAIDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
QT+MNLSGES + ++YK+ + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 62 QTFMNLSGESVQQIMSFYKVEHQNLFVLYDDIDIDVGKLRIRQKGSSGTHNGMKNIIYLL 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR G+ +PP MD +++L F + + L E + KGL +S
Sbjct: 122 GYDDFPRFRIGVSKPPQYMDLASYVLSNFTSEETNILSDVLDNCSEACLYAIEKGLDKSM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|410865574|ref|YP_006980185.1| Peptidyl-tRNA hydrolase [Propionibacterium acidipropionici ATCC
4875]
gi|410822215|gb|AFV88830.1| Peptidyl-tRNA hydrolase [Propionibacterium acidipropionici ATCC
4875]
Length = 200
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 111/198 (56%), Gaps = 20/198 (10%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDA---- 71
+PWL VGLGNPG Y TRH+VG ++ G ++++ +A + + DA
Sbjct: 3 QPWLVVGLGNPGPAYAATRHSVGAMVVAELCRRAGETLSSARGLRAETARTRISDAGLGM 62
Query: 72 ------PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
PV+L + +TYMN SG + +A + ++P+ R++V HD++ L G +R++ GG
Sbjct: 63 PAAQAVPVVLMRSRTYMNDSGVAVRKVADFDRIPVGRIIVVHDEIDLDLGRIRIKAGGGD 122
Query: 126 GGHNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
GHNGL+S+ ++ R G+GRPPG+ DP ++L+KF A R D + +
Sbjct: 123 NGHNGLRSMRSHLRSGDFLRVRVGVGRPPGRQDPADYVLKKFAAGERAEADLQVSLAADA 182
Query: 177 LKLLLSKGLTESARHFNT 194
++ L+++GL + FN+
Sbjct: 183 VECLMTQGLGAAQNRFNS 200
>gi|375087432|ref|ZP_09733804.1| peptidyl-tRNA hydrolase [Megamonas funiformis YIT 11815]
gi|374560760|gb|EHR32116.1| peptidyl-tRNA hydrolase [Megamonas funiformis YIT 11815]
Length = 202
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 9/175 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG++Y TRHNVGF ++DA AE I++ A +G +G +LL KPQ
Sbjct: 3 IIVGLGNPGNEYAKTRHNVGFMLVDALAEHLNINLWKDKFNAQIAEGRIGTEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGE+ GPL +YK+ ++V HDDM +P G +R+R G GGHNG+KS++
Sbjct: 63 TYMNNSGEAVGPLMRWYKVTPEDIIVAHDDMDIPAGTIRIRKKGSSGGHNGIKSLIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
NF G+GRP +L F + +D A++ + ++ +++ +
Sbjct: 123 SENFPRVRLGVGRPLPGWSVVNHVLAPFPQEDKTAVDEAIKYLIPAVECIVNDSV 177
>gi|365840561|ref|ZP_09381746.1| aminoacyl-tRNA hydrolase [Anaeroglobus geminatus F0357]
gi|364561178|gb|EHM39091.1| aminoacyl-tRNA hydrolase [Anaeroglobus geminatus F0357]
Length = 188
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 8/188 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+G++HN GF ++D A +S+ +A V LL KPQ
Sbjct: 1 MIVGLGNPGREYEGSKHNAGFAVVDELARKWDVSLWKSQMEALVASVAVDGETALLVKPQ 60
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + GPL +YK+ V V +DDM LP G LR+R NG GGHNG++S+ N
Sbjct: 61 TYMNDSGRAVGPLMRWYKIAEEDVYVIYDDMDLPVGKLRIRENGSDGGHNGIRSLFANGC 120
Query: 138 -----FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
FR GIGRP G+ D +L F+ + + E ++ ++ G+++
Sbjct: 121 RNFVRFRLGIGRPLGRQDVINHVLTPFSEAYCAQFADGVAYAAEAVEGVMKLGVSKGMNR 180
Query: 192 FNTIQKYK 199
+N +K K
Sbjct: 181 YNPKRKSK 188
>gi|149182809|ref|ZP_01861271.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
gi|148849476|gb|EDL63664.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
Length = 185
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GFE+ID A+ +N K + V+L KP
Sbjct: 3 LIVGLGNPGSQYDHTRHNIGFEVIDELAKRFDSPLNQSKFKGVYASVHHKGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES PL Y+ + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TYMNLSGESIVPLMDYFDIDEEDLVVIYDDLDLPVGKIRLRQKGSPGGHNGMKSIIAHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++L +F RE + ++ + + L K E
Sbjct: 123 TQQFNRIRVGIDRPPSGMKVPDYVLGRFTPEERETMQDVIKASADACEAWLEKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 SFN 185
>gi|429123607|ref|ZP_19184140.1| putative peptidyl-tRNA hydrolase [Brachyspira hampsonii 30446]
gi|426280440|gb|EKV57454.1| putative peptidyl-tRNA hydrolase [Brachyspira hampsonii 30446]
Length = 298
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPGD+YK RHNVGF +ID AE+ I+ + K+ + + + +L KPQ
Sbjct: 5 LIIGLGNPGDEYKNNRHNVGFILIDKIAENFNINFDNNKKKSLYARSKENNIEYILLKPQ 64
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES ++ ++ + V+V +DDM +P G +++ G GGHNG+KS++++ +
Sbjct: 65 TFMNLSGESAIFISKFFNIKPEDVIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQ 124
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG-VEVLKLLL 181
GIGRP ++L F+ RE +DTA+ + ++ +K+ L
Sbjct: 125 SDDFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTAIADDIIDAVKIAL 176
>gi|407984843|ref|ZP_11165451.1| peptidyl-tRNA hydrolase [Mycobacterium hassiacum DSM 44199]
gi|407373678|gb|EKF22686.1| peptidyl-tRNA hydrolase [Mycobacterium hassiacum DSM 44199]
Length = 186
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 15/189 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAKP 78
VGLGNPG +Y TRHN+GF + D A+ G VH K A G +G V++AKP
Sbjct: 1 MVGLGNPGPQYATTRHNLGFMVADILADRIGAGFK-VHKKSGAEVVTGRLGGRSVVVAKP 59
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV---- 134
+ YMN SG GPLA +Y +P V++ HD++ + G +RL+ GG GHNGL+SV
Sbjct: 60 RCYMNESGRQVGPLAKFYSVPPADVIIIHDELDIDFGRIRLKFGGGVAGHNGLRSVSSAL 119
Query: 135 -MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N+F GIGRPPG+MD F+L F A + + T ++ + +LL+ GL +
Sbjct: 120 GTNDFHRVRVGIGRPPGRMDGARFVLSPFTAAEWKEVPTICEQAADATELLVQHGLVAAQ 179
Query: 190 RHFNTIQKY 198
NT+ +
Sbjct: 180 ---NTVHAW 185
>gi|254388784|ref|ZP_05004016.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|326441621|ref|ZP_08216355.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197702503|gb|EDY48315.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 199
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG-----DA 71
PWL VGLGNPG Y RHNVGF + D AE G + +A +G +G
Sbjct: 9 PWLIVGLGNPGPGYAANRHNVGFMVADLLAERVGGAFKRAPKAQAQVVEGRIGPPGPASR 68
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP ++MNLSG L +YK+P R++ HD++ + G LRL+ GG GHNGL
Sbjct: 69 RVVLAKPMSFMNLSGGPVVALRDFYKVPTERIVAIHDELDIDYGTLRLKLGGGDNGHNGL 128
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F+ R+ +D + + ++ L+++
Sbjct: 129 KSMTKAMGPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEALVTE 188
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 189 GLERAQSAYNS 199
>gi|406573308|ref|ZP_11049060.1| peptidyl-tRNA hydrolase [Janibacter hoylei PVAS-1]
gi|404557240|gb|EKA62690.1| peptidyl-tRNA hydrolase [Janibacter hoylei PVAS-1]
Length = 193
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 9/179 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +Y G RHNVG +ID AE G + T A +G ++ P
Sbjct: 6 WLVVGLGNPGPQYAGNRHNVGAMVIDHLAERAGARLRTHKAGAAAESVRLGSTRAIIGIP 65
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+YMNLSG T LA+++ +P R +V HD++ +P G +RL+ GG GGHNGL+S+ ++F
Sbjct: 66 SSYMNLSGGPTKGLASFFSVPPERTIVVHDELDIPFGEVRLKLGGGEGGHNGLRSITSSF 125
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+MD A++L+ F+A R+ + + + + ++LL+ KGLT++
Sbjct: 126 GTKDYLRVRVGIGRPPGRMDAAAYVLKDFSATERKELPFLVDDAADAVELLIDKGLTDA 184
>gi|288554662|ref|YP_003426597.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
gi|288545822|gb|ADC49705.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
Length = 185
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY GTRHN+GF++ID A+ G+ ++ K +G + V KP
Sbjct: 3 VVVGLGNPGAKYAGTRHNIGFDIIDYCAKELGVELDQAKFKGVYGTKVINGEKVFFLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES PL Y+ + + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TYMNLSGESVRPLLDYFNIDIEDLVVIYDDLDLPAGKIRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+ F+ GI RP ++L ++ RE ++ ++ + + ++ K E
Sbjct: 123 TDKFKRIRVGIDRPKNGEPIVNYVLGTYHPDEREAVNESIVQAAKAVEAWTEKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 QFN 185
>gi|435852895|ref|YP_007314214.1| peptidyl-tRNA hydrolase [Halobacteroides halobius DSM 5150]
gi|433669306|gb|AGB40121.1| peptidyl-tRNA hydrolase [Halobacteroides halobius DSM 5150]
Length = 185
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 10/173 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY+ TRHN GF +D A++ +N KA + V ++LAKPQ
Sbjct: 3 LIVGLGNPGIKYQSTRHNAGFMALDRLAKNYHTEINREEHKAMIEKIRVNGETIILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG++ ++ YY + +++ +DD+ L G +R+R GGHGGHNG+KS+
Sbjct: 63 TFMNKSGQAVKKISDYYDIDPKDIVIVYDDLDLAPGRIRVRPTGGHGGHNGIKSIFAGLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
GIGRP QM ++L +F +ID AL E V+ LKL L +
Sbjct: 123 TKEFPRLRVGIGRPK-QMSVVDYVLDQFETEEWSKIDQALDEAVDALKLYLEQ 174
>gi|392423512|ref|YP_006464506.1| peptidyl-tRNA hydrolase [Desulfosporosinus acidiphilus SJ4]
gi|391353475|gb|AFM39174.1| peptidyl-tRNA hydrolase [Desulfosporosinus acidiphilus SJ4]
Length = 185
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 94/172 (54%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GF ID AE+ G+ T + + +G V +LL KP
Sbjct: 3 VIVGLGNPGPQYAETRHNIGFLFIDGLAEALGLQFRT-KFQGLWTEGSVQGERLLLLKPH 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S L +YK+ +L+ HDDM LP G LRLR +G GGHNG+KS+M
Sbjct: 62 TFMNLSGRSVRELVNFYKIAPEDILIVHDDMDLPLGKLRLRDHGSAGGHNGIKSIMAELG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
G+GRPP + DP ++L F I+ L+ + L L
Sbjct: 122 TETFWRLKLGVGRPPKEWDPARYVLSPFGETELPAIEDLLERAEKAAGLWLK 173
>gi|148655155|ref|YP_001275360.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
gi|166229447|sp|A5US07.1|PTH_ROSS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148567265|gb|ABQ89410.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
Length = 217
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPGD Y TRHN+GF ++ A+ + A +G + V LA P
Sbjct: 2 WLIVGLGNPGDTYARTRHNIGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALALP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN- 136
QTYMNLSG++ L +YK+ P +LV +DD+ LP GVLRLR G G HNG++S++
Sbjct: 62 QTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIITL 121
Query: 137 -------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
R GI RPP D ++L +F ++ +Q+ + L+ ++ +G+ +
Sbjct: 122 LGSQVFPRLRIGIDRPPPAWDLADYVLGRFTPEQEAQLPDIMQKAADALETVVREGMAVA 181
Query: 189 ARHFN 193
N
Sbjct: 182 MNRIN 186
>gi|21221563|ref|NP_627342.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289771144|ref|ZP_06530522.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
gi|22095998|sp|Q9K3T8.1|PTH_STRCO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|8894758|emb|CAB95918.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289701343|gb|EFD68772.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
Length = 200
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVG- 69
T PWL GLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 4 TTDAGAPWLVAGLGNPGPEYASNRHNVGFMVADLLAERIGARFKRHGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V+LAKP ++MN+SG L +YK+P+ ++ HD++ + GVLRL+ GG
Sbjct: 64 PGPANRRVILAKPMSFMNVSGGPVTALRDFYKVPVGNIVAVHDELDIDYGVLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ + GIGRPPG+M F+L+ F++ R+ +D + + +
Sbjct: 124 NGHNGLKSITKSLGADYHRVRFGIGRPPGRMPVADFVLRDFSSTERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 EALVIEGLERAQSAYNS 200
>gi|295838327|ref|ZP_06825260.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
gi|197695880|gb|EDY42813.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
Length = 200
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVG-----DA 71
PWL GLGNPG +Y G RHNVGF + D A G +A +G +G
Sbjct: 10 PWLVAGLGNPGPEYAGNRHNVGFMVADLLAARLGGRFKRAARAQAQVVEGRLGVPGVSST 69
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V++AKP ++MNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNGL
Sbjct: 70 RVVIAKPLSFMNLSGGPVTALRDFYKVPLERVVAVHDELDVDYGVLRLKLGGGDNGHNGL 129
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+ F+L+ F++ R+ +D + + ++ L+++
Sbjct: 130 KSMTKAMGPGYHRVRFGIGRPPGRTQVADFVLRDFSSAERKELDYFVDRAADAVEALVTE 189
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 190 GLERAQGSYNS 200
>gi|138893725|ref|YP_001124178.1| peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
gi|166199333|sp|A4IJC9.1|PTH_GEOTN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134265238|gb|ABO65433.1| Peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
Length = 186
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHN+GF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL +Y + ++ V++ +DD+ LP G +RLR GG GGHNG+KS++++
Sbjct: 63 TYMNLSGECVCPLIDFYDIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP ++L +F + + A+ + + ++ +
Sbjct: 123 TEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPAVMEAVLRAADACEQAVTTPFIQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 DFN 185
>gi|290959808|ref|YP_003490990.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
gi|260649334|emb|CBG72449.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
Length = 200
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T + PWL GLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 4 TTDPSAPWLIAGLGNPGPEYAANRHNVGFMVADLLAERIGGRFKRAGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V+LAKP ++MNLSG L +YK+P+ ++ HD++ + GVLRL+ GG
Sbjct: 64 PGPANRRVILAKPMSFMNLSGGPVTALRDFYKVPVANIVAIHDELDIDYGVLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ GIGRPPG+M F+L+ F+A R+ +D + + +
Sbjct: 124 NGHNGLKSMTKAMGSDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 ECLVIEGLERAQGTYNS 200
>gi|407474826|ref|YP_006789226.1| peptidyl-tRNA hydrolase Pth [Clostridium acidurici 9a]
gi|407051334|gb|AFS79379.1| peptidyl-tRNA hydrolase Pth [Clostridium acidurici 9a]
Length = 186
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 111/184 (60%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY GTRHNVGF++ID A + +N + K+ +G+ +G+ V+ KP
Sbjct: 2 YVVVGLGNPGSKYDGTRHNVGFDVIDILANRHNVKINKIKFKSVYGEVNLGNEKVMFVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QT+MN SGES ++ ++K+P+ ++V DD+ + G LR+R G G HNG+KS++
Sbjct: 62 QTFMNRSGESVLEISNFFKVPVENIIVIVDDIDIGLGALRIRSKGSAGSHNGMKSIIYLL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+NF G+G+P D F+L +FN + +D AL + + ++ L+ +G+ S
Sbjct: 122 QKDNFPRVKIGVGKPEVGRDLADFVLGRFNKEEQIIMDEALNKAADSIECLIKEGIDSSM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NKYN 185
>gi|297193931|ref|ZP_06911329.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
gi|197720294|gb|EDY64202.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
Length = 197
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 16/192 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAP---- 72
PWL VGLGNPG Y RHNVGF + D AE G S +A +G +G AP
Sbjct: 7 PWLIVGLGNPGPGYAANRHNVGFMVADLLAERIGGSFKRAGKAQAQALEGRIG-APGPSN 65
Query: 73 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V+LAKP +YMNLSG L +YK+P + ++ HD++ + G LRL+ GG GHNG
Sbjct: 66 RRVILAKPMSYMNLSGGPVTALRDFYKVPTSNIVAVHDELDIDYGTLRLKLGGGDNGHNG 125
Query: 131 LKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
LKS+ GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 126 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVECLVI 185
Query: 183 KGLTESARHFNT 194
GL + +N+
Sbjct: 186 DGLERAQGTYNS 197
>gi|418475414|ref|ZP_13044815.1| peptidyl-tRNA hydrolase [Streptomyces coelicoflavus ZG0656]
gi|371543979|gb|EHN72738.1| peptidyl-tRNA hydrolase [Streptomyces coelicoflavus ZG0656]
Length = 198
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVG 69
T PWL GLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 1 MTTDAGAPWLVAGLGNPGGEYAANRHNVGFMVADLLAERMGARFKRHGKAQAQVVEGRIG 60
Query: 70 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 124
+ V+LAKP ++MN+SG L +YK+P+ ++ HD++ + GVLRL+ GG
Sbjct: 61 PPGPANRRVILAKPMSFMNVSGGPVTVLRDFYKVPVGNIVAVHDELDIDYGVLRLKLGGG 120
Query: 125 HGGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
GHNGLKS+ + GIGRPPG+M F+L+ F++ R+ +D + +
Sbjct: 121 DNGHNGLKSITKSLGADYHRVRFGIGRPPGRMPVADFVLRDFSSAERKELDYFVDRAADA 180
Query: 177 LKLLLSKGLTESARHFNT 194
++ L+ +GL + +N+
Sbjct: 181 VEALVIEGLERAQSAYNS 198
>gi|363893678|ref|ZP_09320773.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium ACC19a]
gi|361963480|gb|EHL16552.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium ACC19a]
Length = 187
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ T+HNVGF ID ++ I ++ + KA G+G ++L KP
Sbjct: 2 YIIVGLGNPGLKYQNTKHNVGFMAIDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
QT+MNLSGES + ++YK + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 62 QTFMNLSGESVQQIMSFYKAEHQNLFVLYDDIDIDIGKLRIRQKGSSGTHNGMKNIIYLL 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERID---TALQEGVEVLKLLLSKGLT 186
FR G+ RPP MD +++L F +E ID L E + KGL
Sbjct: 122 GYDDFPRFRIGVSRPPQYMDLASYVLSNF---TKEEIDILLNVLDNCSEACLYAIEKGLD 178
Query: 187 ESARHFN 193
+S +N
Sbjct: 179 KSMNKYN 185
>gi|304436451|ref|ZP_07396425.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370497|gb|EFM24148.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 208
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y T+HNVGF +IDA AE +S + ++ + +G + L KP
Sbjct: 3 LIAGLGNPGAEYANTKHNVGFMLIDALAEHLNVSAWKEYFSSSVAEARIGGEKIFLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMN SGE+ GP+ +YYKL ++V HDDM +P G +R+R G GGHNG+KS++++
Sbjct: 63 TYMNNSGEAIGPMLSYYKLSSEDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILSHVG 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP +L F +I A+ + + +++ G +
Sbjct: 123 SEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIREAIAYLLPAVTCIVTDGTDFAMN 182
Query: 191 HFNTIQKYK 199
+N +K K
Sbjct: 183 RYNPHRKKK 191
>gi|158338610|ref|YP_001519787.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
gi|158308851|gb|ABW30468.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
Length = 206
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 107/189 (56%), Gaps = 13/189 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAP-VLL 75
P L VGLGNPG KY TRHN+GF ID A+ IS+ + + +G+G G V L
Sbjct: 8 PELIVGLGNPGSKYDRTRHNIGFAFIDRLAQHWQISLTSERRFQGEYGEGLGGQGRRVRL 67
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + ++KL VLV +D+M LP G LRLR G GGHNG++S++
Sbjct: 68 LKPHTYMNNSGQSIRAVIDWFKLEPTSVLVIYDEMALPVGKLRLRLKGSAGGHNGMRSII 127
Query: 136 NNF---------RGIGRPPGQ--MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
++ GIG PP + D +F+L +F + + + L GV+ +++ L KG
Sbjct: 128 SHLGTPEVPRLRIGIGSPPPERGKDTISFVLGRFAPLENQLLPAVLDLGVDAVEMALKKG 187
Query: 185 LTESARHFN 193
+ +S FN
Sbjct: 188 IEQSMTLFN 196
>gi|260589952|ref|ZP_05855865.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|331084271|ref|ZP_08333376.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539759|gb|EEX20328.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|330401806|gb|EGG81383.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 10/190 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y+ TRHN+GF+++D + I + KA +G+G +G V++ KP
Sbjct: 3 LIAGLGNPGKQYEKTRHNMGFDVVDELIDRHEIPQAGIAHKALYGKGIIGGEKVIVEKPL 62
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES YYK+ P ++V +DD+ L G +R+R G GGHNG+K+++
Sbjct: 63 TYMNLSGESVREFIDYYKMDPETEMIVIYDDIDLEPGQIRIRKKGSAGGHNGIKNIIAQL 122
Query: 136 ---NNFR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N +R G+G P D ++L +F++ RE +D A+Q+ + +++++ KG+ +
Sbjct: 123 GTQNFYRIKVGVGAKPKGWDLADYVLGRFSSKEREVVDAAIQDAADAVEMIIEKGIDAAM 182
Query: 190 RHFNTIQKYK 199
H+N K K
Sbjct: 183 NHYNGSGKKK 192
>gi|289579381|ref|YP_003478008.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
gi|289529094|gb|ADD03446.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
Length = 189
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 11/188 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+ TRHN+GF +ID A+ GI++ + K+ G+ + ++L KP
Sbjct: 2 FIIAGLGNPGIEYEQTRHNIGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 62 QTFMNSSGEALYEAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIYLL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D + +L KF ++ ID A+ + + + ++ G+ +
Sbjct: 122 NSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAM 179
Query: 190 RHFNTIQK 197
FN +QK
Sbjct: 180 SKFNGLQK 187
>gi|312109200|ref|YP_003987516.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|336233594|ref|YP_004586210.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
gi|311214301|gb|ADP72905.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|335360449|gb|AEH46129.1| Peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
Length = 187
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHNVGF +ID A+ IS T + V+L KP
Sbjct: 4 LFVGLGNPGKEYEQTRHNVGFMVIDELAKRWNISFQTAKFNGMIASHIISGEKVILCKPL 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY++ +N V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 64 TYMNLSGECVRPLIDYYRIDINDVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIHHLG 123
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP ++L +F+ I A+ + + +++ +
Sbjct: 124 TQEFKRIRIGIGRPASGEKVIDYVLGRFHEEESGAIMEAILRSADACEKAVTEPFLQVMN 183
Query: 191 HFNT 194
FN
Sbjct: 184 EFNV 187
>gi|423718317|ref|ZP_17692499.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidans TNO-09.020]
gi|383365253|gb|EID42552.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidans TNO-09.020]
Length = 186
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHNVGF +ID A+ IS T + V+L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHNVGFMVIDELAKRWNISFQTAKFNGMIASHIISGEKVILCKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY++ +N V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGECVRPLIDYYRIDINDVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP ++L +F+ I A+ + + +++ +
Sbjct: 123 TQEFKRIRIGIGRPASGEKVIDYVLGRFHEEESGAIMEAILRSADACEKAVTEPFLQVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 EFNV 186
>gi|225433776|ref|XP_002268699.1| PREDICTED: uncharacterized protein LOC100253226 [Vitis vinifera]
Length = 518
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 64/81 (79%)
Query: 54 MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 113
M+ VH KA FGQGFVGD V LA P TYMNLSGES GPLAAYYKLPLNR++VFHDD LP
Sbjct: 1 MDIVHHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLPLNRMVVFHDDKSLP 60
Query: 114 CGVLRLRHNGGHGGHNGLKSV 134
CGVL L H GGHG HNG + V
Sbjct: 61 CGVLCLHHKGGHGSHNGRRIV 81
>gi|15807362|ref|NP_296093.1| peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
gi|14195089|sp|Q9RRW3.1|PTH_DEIRA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|6460187|gb|AAF11918.1|AE002068_1 peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
Length = 215
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---VLLA 76
L VGLGNPG+KY TRHNVG+ ++D A G S +A + +G AP VLL
Sbjct: 3 LIVGLGNPGEKYAQTRHNVGWLVVDELARRAGGSWRK-DGEAEVCEVRLGTAPGEKVLLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQT+MN SG++ PL ++YKL ++LV DD+ P G+LR R G HGG NG++ ++
Sbjct: 62 KPQTFMNTSGKAVWPLMSFYKLEGEQLLVVQDDLDSPFGLLRFRLGGRHGGQNGVRDIIA 121
Query: 137 NFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GI RPP DP ++L K+ RE + ++ GV +L +GL E
Sbjct: 122 RLGYDRFPRLKIGISRPPAGRDPADWVLSKWRDEERETLAELVRLGVGAAELWAVQGLAE 181
Query: 188 SARHFN 193
+ + +N
Sbjct: 182 AQQMYN 187
>gi|196250766|ref|ZP_03149453.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
gi|196209716|gb|EDY04488.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
Length = 186
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHN+GF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL +Y + ++ V++ +DD+ LP G +RLR GG GGHNG+KS++++
Sbjct: 63 TYMNLSGECVCPLIDFYDIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP ++L +F + + A+ + + ++ +
Sbjct: 123 TEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPVVMEAVLRAADACEQAVTTPFIQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 DFN 185
>gi|308171944|ref|YP_003918649.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|384157666|ref|YP_005539739.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|384162459|ref|YP_005543838.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
gi|384166681|ref|YP_005548059.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens XH7]
gi|307604808|emb|CBI41179.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|328551754|gb|AEB22246.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|328910014|gb|AEB61610.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
gi|341825960|gb|AEK87211.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens XH7]
Length = 188
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 123 TPEFDRVRIGIGRPANGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|29830107|ref|NP_824741.1| peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
gi|46576777|sp|Q82HE5.1|PTH_STRAW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29607217|dbj|BAC71276.1| putative peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
Length = 203
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG-----DA 71
PWL VGLGNPG +Y RHNVGF + D AE G +A +G +G +
Sbjct: 13 PWLIVGLGNPGPEYARNRHNVGFMVADLLAERIGGKFKRAGKAQAQVIEGRIGPPGPANR 72
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP +YMNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNGL
Sbjct: 73 RVILAKPMSYMNLSGGPVNALREFYKVPVANIVAVHDELDIDYGVLRLKLGGGDNGHNGL 132
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F + R+ +D + + + L+ +
Sbjct: 133 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYLVDRAADAAECLVIE 192
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 193 GLERAQGTYNS 203
>gi|166031179|ref|ZP_02234008.1| hypothetical protein DORFOR_00865 [Dorea formicigenerans ATCC
27755]
gi|166029026|gb|EDR47783.1| aminoacyl-tRNA hydrolase [Dorea formicigenerans ATCC 27755]
Length = 203
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 10 GFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG 69
G V + GLGNP +Y+GTRHNVGF++ID AE I+++ +A G+G +
Sbjct: 2 GRDKEVENMIIIAGLGNPTKEYEGTRHNVGFQVIDKIAEKYNIAVDAKKGRAYVGKGIIE 61
Query: 70 DAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
VLL KPQTYMNLSGES L Y+K+ P +LV +DD+ L G +R+R G GGH
Sbjct: 62 GQKVLLVKPQTYMNLSGESIRELVDYFKVDPKEELLVIYDDISLNPGQIRIRKKGSAGGH 121
Query: 129 NGLKSVM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
NG+K+++ + F+ G+G P D A++L F+ E ++ ++ + +
Sbjct: 122 NGIKNIIAQLGTDTFQRIKVGVGEKPKGYDLAAYVLGHFHGEDLELVEEGYEKAISATEE 181
Query: 180 LLSKGLTESARHFN 193
+L + + +N
Sbjct: 182 ILKGEIDAAMNEYN 195
>gi|291546532|emb|CBL19640.1| peptidyl-tRNA hydrolase [Ruminococcus sp. SR1/5]
Length = 192
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG +Y+ TRHN+GF+ +D E I V A +G+G +G +L KP
Sbjct: 2 YLIAGLGNPGKQYEATRHNMGFDTVDCLVEKHNIPQGGVKFNAMYGKGIIGGEKAILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
+YMNLSG ++ Y+K+ P ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 62 LSYMNLSGGPIQEMSGYFKIDPETELIVIYDDIDLEPGQLRIRKKGSAGGHNGIKDIIRR 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D F+L F+ R+ +D + + E ++++LS+G+ +
Sbjct: 122 LGTEKFIRIRVGVGAKPKDWDLADFVLGHFSDSDRKLVDEGINDAAEAVEMILSEGVDAA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MNKYN 186
>gi|15612631|ref|NP_240934.1| peptidyl-tRNA hydrolase [Bacillus halodurans C-125]
gi|14195082|sp|Q9KGJ3.1|PTH_BACHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|10172680|dbj|BAB03787.1| stage V sporulation protein C (peptidyl-tRNA hydrolase) [Bacillus
halodurans C-125]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 101/184 (54%), Gaps = 11/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY GTRHNVGF+++DA A I + +G+G + + L KPQ
Sbjct: 3 LIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SGES P YY + + +LV +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TFMNRSGESVRPFLEYYNMEVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHLG 122
Query: 136 -NNFR----GIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
++F+ G+ RP PG+ + +L ++ ++ I A+ E + K E
Sbjct: 123 TSDFKRIRVGVDRPAPGETVVQ-HVLGRYRPEEKDAISEAIDLSAEAAEAFTKKPFLEVM 181
Query: 190 RHFN 193
FN
Sbjct: 182 NTFN 185
>gi|163791050|ref|ZP_02185471.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
gi|159873695|gb|EDP67778.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
Length = 191
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D FA + N +A + + F+G VLL KPQ
Sbjct: 3 MIVGLGNPGSKYKDTKHNIGFITLDEFAFQHKMVFNKTKFEAIYAEAFIGSEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + PL Y+ + + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 63 TFMNDSGRAVRPLMDYFNVEIEDLIVVYDDLDLPVGKLRLRQKGSAGGHNGIKSLIQHLA 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GI RP G+ +L F E + A+++ V L + ++
Sbjct: 123 TADFNRVRIGIDRPLGKQTVVQHVLSGFPKNQHEELLLAIKDSVAALDYWIEGHSFSDVM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NQFN 186
>gi|297545522|ref|YP_003677824.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843297|gb|ADH61813.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 189
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 106/188 (56%), Gaps = 11/188 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+ TRHN+GF +ID A+ GI++ + K+ G+ + ++L KP
Sbjct: 2 FIIAGLGNPGIEYEQTRHNIGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGE+ +YK+PL V++ +DD L G +R+R G GGHNG+ S++
Sbjct: 62 QTFMNSSGEALYEAVNFYKIPLENVIIIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIYLL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D + +L KF ++ ID A+ + + + ++ G+ +
Sbjct: 122 NSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAM 179
Query: 190 RHFNTIQK 197
FN +QK
Sbjct: 180 SKFNGLQK 187
>gi|389819103|ref|ZP_10209144.1| peptidyl-tRNA hydrolase [Planococcus antarcticus DSM 14505]
gi|388463518|gb|EIM05870.1| peptidyl-tRNA hydrolase [Planococcus antarcticus DSM 14505]
Length = 187
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG Y+ TRHN+GF+++D A + K + + V+L KP
Sbjct: 3 LIIGLGNPGKAYEDTRHNIGFKVVDYLASQWNAPLTQSKFKGMYSISHRPEGKVMLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE+ L YY + L ++V +DD+ LP G LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGETVSALMDYYGIELKDIIVIYDDLDLPAGQLRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GI RPP M ++LQ+F+ + A+++ + L K E
Sbjct: 123 TQEFNRLRIGISRPPAGMKVPDYVLQRFSKEEIPEVADAIKKSAAACETWLFKPYLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 QFN 185
>gi|425738705|ref|ZP_18856962.1| peptidyl-tRNA hydrolase [Staphylococcus massiliensis S46]
gi|425478976|gb|EKU46158.1| peptidyl-tRNA hydrolase [Staphylococcus massiliensis S46]
Length = 190
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G KY TRHN+GFE+ID E +++ + + +GD V+L +P T
Sbjct: 4 IVGLGNIGKKYDLTRHNIGFEVIDWLLERHNFNLDKQKFRGAYTIERMGDEKVMLIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ GPL YY + + +LV +DDM L G +RLR G GGHNG+KS++
Sbjct: 64 LMNLSGEAVGPLMDYYGVEVEDLLVLYDDMDLEQGQIRLRQKGSAGGHNGMKSLIQHLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
N F+ GIGRP M ++LQKF++ + +D ++ ++ + E++R
Sbjct: 124 NEFKRVRIGIGRPTNGMSVPDYVLQKFSSDEMKTMDKVIEHSARAVETFI-----ETSRF 178
Query: 192 FNTIQKY 198
+ + Y
Sbjct: 179 DHVMNNY 185
>gi|312897815|ref|ZP_07757231.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
gi|310621199|gb|EFQ04743.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
Length = 187
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 97/182 (53%), Gaps = 8/182 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y+G++HN GF +ID A G++ A V VLL KPQ
Sbjct: 1 MIAGLGNPGREYEGSKHNAGFTVIDELARRWGVNTWQTRMDAEVAIANVDGEQVLLVKPQ 60
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG+S GPL +YK+ V V +DDM LP G LR+R NG GGHNG+KS+ N
Sbjct: 61 TYMNDSGKSVGPLMRWYKIDEKDVYVVYDDMDLPIGKLRIRENGSDGGHNGIKSLFANGC 120
Query: 138 -----FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
FR GIGRP G MD +L F R+ E ++ L G+++
Sbjct: 121 RDFVRFRLGIGRPLGHMDVIHHVLTPFPEEYRQTFADGAAYAAEAVEGCLKLGVSKGMNR 180
Query: 192 FN 193
+N
Sbjct: 181 YN 182
>gi|375360744|ref|YP_005128783.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385267079|ref|ZP_10045166.1| peptidyl-tRNA hydrolase [Bacillus sp. 5B6]
gi|421729451|ref|ZP_16168583.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451348557|ref|YP_007447188.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens IT-45]
gi|452854116|ref|YP_007495799.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|371566738|emb|CCF03588.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385151575|gb|EIF15512.1| peptidyl-tRNA hydrolase [Bacillus sp. 5B6]
gi|407076695|gb|EKE49676.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449852315|gb|AGF29307.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens IT-45]
gi|452078376|emb|CCP20126.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 188
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 123 TPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|443320067|ref|ZP_21049195.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 73106]
gi|442790219|gb|ELR99824.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 73106]
Length = 192
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 9/185 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFV-GDAPVLL 75
P L +GLGNP KY TRHN+GF ++D A++ G+S + F +G G V L
Sbjct: 3 PQLIIGLGNPEPKYLQTRHNIGFMVLDTLAQAWGLSWQEEKRFQGLFSEGKARGGKKVYL 62
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSG+S + +YKLP + +LV +DD+ LP G LRLR +G GGHNG+KS++
Sbjct: 63 LKPLTYMNLSGQSVRAVVDWYKLPTDSLLVVYDDLDLPVGRLRLRRSGSAGGHNGMKSII 122
Query: 136 NNFRG-------IGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+ G IG + + +L KF ++ ID ++ + VL+L L +GL ++
Sbjct: 123 AHLGGQDFSRLRIGIGKSNVPTISHVLGKFTPSEKKAIDEVMKVTIAVLELSLKEGLDQA 182
Query: 189 ARHFN 193
+N
Sbjct: 183 MNQYN 187
>gi|406982008|gb|EKE03381.1| Peptidyl-tRNA hydrolase [uncultured bacterium]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 11/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKP 78
+ VGLGNPGDKYK TRHNVGF + A I+ + G+G + D VL+ +P
Sbjct: 3 IIVGLGNPGDKYKETRHNVGFMVTGELASKHNIAGKIDAKFNSIIGKGVINDKEVLIVQP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG++ + +YK+ R+LV DD+ L G +R R +G GGHNG++S+++N
Sbjct: 63 LTYMNLSGQAISKVLNWYKIEPTRLLVVFDDVSLEIGRIRFRPSGSDGGHNGIRSIIDNL 122
Query: 139 ----------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIG PG K ++LQKF + ID + +E ++ L +G+ ++
Sbjct: 123 GGFKDFSRLKIGIGPDPGSDIRKTYVLQKFTKPEKNIIDKVVPVCIEGIEYYLKEGIEKA 182
Query: 189 ARHFN 193
+N
Sbjct: 183 QNKYN 187
>gi|227873323|ref|ZP_03991585.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
gi|227840838|gb|EEJ51206.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
Length = 197
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQG-ISMNTVHCKATFGQGFVGDAPVLLAK 77
WL GLGNP KY GTRHN GF +ID + G +S+ + + + + +G VLL K
Sbjct: 2 WLIAGLGNPEKKYVGTRHNAGFAVIDVLCKELGNLSLESTKFRGAYTKTRIGSEEVLLLK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMNLSGES PLA Y+K+P +LV D++ G +R+R G GGHNGLK+++ +
Sbjct: 62 PLTYMNLSGESIVPLAQYFKIPKEHILVLSDEISFAPGDIRIRKKGSAGGHNGLKNIIAH 121
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G + D +L F+ + ++ A + + ++ KG+ ++
Sbjct: 122 LHSEEFPRIRLGVGAKGEKEDLAHHVLSPFSKAEQAEMEDAYERAAKACIAIVEKGIDQA 181
Query: 189 ARHFNTIQKYKH 200
FN +K K
Sbjct: 182 MNEFNQKKKGKE 193
>gi|429193741|ref|ZP_19185885.1| aminoacyl-tRNA hydrolase [Streptomyces ipomoeae 91-03]
gi|428670549|gb|EKX69428.1| aminoacyl-tRNA hydrolase [Streptomyces ipomoeae 91-03]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 14/198 (7%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 69
T PWL GLGNPG +Y RHNVGF ++D AE G +A +G +G
Sbjct: 1 MTTDATVPWLIAGLGNPGPEYAMNRHNVGFMVVDLLAERIGGRFKRAGKAQAQVVEGRIG 60
Query: 70 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 124
+ V+LAKP +YMNLSG L +YK+P+ ++ HD++ + G LRL+ GG
Sbjct: 61 PPGPGNRRVILAKPMSYMNLSGGPVNALRDFYKVPVANIVAIHDELDIDYGTLRLKLGGG 120
Query: 125 HGGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
GHNGLKS+ GIGRPPG+M F+L+ F++ R+ +D + +
Sbjct: 121 DNGHNGLKSMTKAMGSDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRAADA 180
Query: 177 LKLLLSKGLTESARHFNT 194
++ L+ +GL + +N+
Sbjct: 181 VECLVIEGLERAQGTYNS 198
>gi|394994187|ref|ZP_10386915.1| peptidyl-tRNA hydrolase [Bacillus sp. 916]
gi|393804963|gb|EJD66354.1| peptidyl-tRNA hydrolase [Bacillus sp. 916]
Length = 188
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 123 TPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVTKTVKACEASLTKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|323701606|ref|ZP_08113278.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|333922333|ref|YP_004495913.1| peptidyl-tRNA hydrolase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533379|gb|EGB23246.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|333747894|gb|AEF93001.1| Peptidyl-tRNA hydrolase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 200
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN+GF +IDA A GI + KA GQ ++G ++LAKPQ
Sbjct: 3 LIVGLGNPGPEYAKTRHNIGFMVIDALARDLGIVVEKNQHKALTGQAYLGREKLILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSG++ L +YKL +LV +DDM LP G LR+R +G GG G+KS++
Sbjct: 63 TYMNLSGQAVVALMNWYKLQPVDLLVIYDDMDLPPGRLRIRQSGSAGGQKGMKSIIELLG 122
Query: 139 --------RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRP G +D +L K + I+ A+ VE K+ + G +
Sbjct: 123 TQEFTRMKVGIGRPEHGAID---HVLGKIDDQEAALINPAIMAAVEAAKVWVLDGAPAAM 179
Query: 190 RHFNTI 195
FN +
Sbjct: 180 NKFNRV 185
>gi|218248401|ref|YP_002373772.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|257061467|ref|YP_003139355.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
gi|218168879|gb|ACK67616.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|256591633|gb|ACV02520.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
Length = 202
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GD 70
TA+ P L +GLGNP KY TRHN+GFE+IDA AE+ +S+ + F +G G+
Sbjct: 5 TALTIPQLIIGLGNPEVKYDKTRHNIGFEVIDALAETWQLSLKENRRFQGLFAEGMARGN 64
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
+ L KP TYMN SG+S ++ +YKL N +LV +DDM LP G +R+R G GGHNG
Sbjct: 65 HKIYLLKPLTYMNRSGQSVRAVSDWYKLYPNSMLVIYDDMDLPVGRMRMRLEGSAGGHNG 124
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
+KS++++ GIG+ + + +L KF +E I L V+ +++ L
Sbjct: 125 MKSIISHVGSQDFPRLRLGIGKSNQSKETISHVLGKFAPQEQEIIAKVLSLAVDAVEMSL 184
Query: 182 SKGLTESARHFN 193
+G+ ++ +N
Sbjct: 185 KEGVAKAMSLYN 196
>gi|261367662|ref|ZP_05980545.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
gi|282570454|gb|EFB75989.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
Length = 197
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD 70
F + WL GLGNP KY GTRHN GFE +D AE +N + +G VG+
Sbjct: 4 FSSLSGADWLIAGLGNPEPKYDGTRHNAGFEALDYLAEQWQCPLNKSKWQGLYGTTQVGE 63
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V+L KP TYMNLSG+S P A +YK+P N ++V DD+ G LR+R +G GGHNG
Sbjct: 64 HKVVLLKPLTYMNLSGQSIAPTANFYKIPANHIIVLCDDITQQPGHLRIRPHGSAGGHNG 123
Query: 131 LKSVMNNF---------RGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 180
LKS++ + GIG +P Q D ++L K R+ + + + +LL
Sbjct: 124 LKSIIASLGTEEFSRIRIGIGAKPNPQYDLAVWVLGKLPPEDRKAMTDRYPDIEQACRLL 183
Query: 181 LSKGLTESARHFN 193
+ L + FN
Sbjct: 184 MDDNLQYAQNKFN 196
>gi|328952986|ref|YP_004370320.1| peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
gi|328453310|gb|AEB09139.1| Peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LF+GLGNPG +YK TRHNVGF++ID ++ GIS+N C A +G+G V+LA+P+
Sbjct: 3 LFIGLGNPGFRYKRTRHNVGFQIIDVLSQRWGISLNRHTCSAQWGRGGWAGQEVVLAQPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + L A+++L +L+ HDD+ LP G L+ GG GGH G+ S++N
Sbjct: 63 TYMNLSGRAVFRLLAFFQLSAADLLIIHDDLDLPLGRLKFVLRGGAGGHRGVASIINTIH 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP + ++L + + + + L+ +L GL ++
Sbjct: 123 TTEFLRLKVGIGRPQYGETVENYVLSPCYPAEIDTYASMIDRTADALEAVLKVGLNQAMS 182
Query: 191 HFN 193
F+
Sbjct: 183 LFH 185
>gi|320529007|ref|ZP_08030099.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
gi|320138637|gb|EFW30527.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
Length = 195
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y T+HNVGF ++DA A+ G+S + + +G V L KPQ
Sbjct: 3 IIAGLGNPGAEYTQTKHNVGFMLVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG + GP+ +YYK+ ++V HDDM +P G +R+R GG GGHNG+KS++++
Sbjct: 63 TYMNDSGSALGPMLSYYKIDTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHVG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP +L F+ + A+ + ++ +++ G+ +
Sbjct: 123 TEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDMAMN 182
Query: 191 HFNTIQK 197
FN +K
Sbjct: 183 RFNPRKK 189
>gi|73748435|ref|YP_307674.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|289432482|ref|YP_003462355.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|452204875|ref|YP_007485004.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi BTF08]
gi|119390933|sp|Q3ZX09.1|PTH_DEHSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|73660151|emb|CAI82758.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|288946202|gb|ADC73899.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|452111931|gb|AGG07662.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi BTF08]
Length = 189
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 102/186 (54%), Gaps = 12/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G + D ++LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG++ L Y L ++V DD+ LP G LRLR G GGHNG+ S++ +
Sbjct: 63 TYMNLSGKAVNQLLRRYNLKATDIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDIG 122
Query: 140 ---------GIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG+P + + +L F RE I+TA+ E L L++ GL
Sbjct: 123 TKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSGLDT 182
Query: 188 SARHFN 193
++ FN
Sbjct: 183 ASNRFN 188
>gi|254491100|ref|ZP_05104281.1| peptidyl-tRNA hydrolase [Methylophaga thiooxidans DMS010]
gi|224463613|gb|EEF79881.1| peptidyl-tRNA hydrolase [Methylophaga thiooxydans DMS010]
Length = 190
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 14/182 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPVLL 75
W+ GLGNPG +Y+GTRHNVGF ++D A G + N H + Q + + V L
Sbjct: 4 WIIAGLGNPGSQYEGTRHNVGFWLLDQLARELGANFTVQNRYHGQLV--QCSLDEHKVYL 61
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP T+MN SG+S LA +YK+PL +LV HD++ L GV+RL+ +GGHGGHNGL+ ++
Sbjct: 62 LKPLTFMNRSGQSVAALANFYKIPLQNILVVHDELDLEPGVVRLKRDGGHGGHNGLRDII 121
Query: 136 -----NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
NF GIG P ++L K + R++++TA+ +++L +LS L
Sbjct: 122 AQTGGKNFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQVETAIDNVLQILPDVLSDKLD 181
Query: 187 ES 188
++
Sbjct: 182 KA 183
>gi|205371996|ref|ZP_03224814.1| peptidyl-tRNA hydrolase [Bacillus coahuilensis m4-4]
Length = 185
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG K+ GTRHN+GFE+ID A+ ++++ K + +L KP
Sbjct: 3 LIVGLGNPGAKFDGTRHNIGFEVIDELAKRFNVALDQSKFKGVYSIVRHEGEKFILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES PL YY + + ++V +DD+ LP G LRLR G GGHNG+KS +
Sbjct: 63 TYMNLSGESIRPLMDYYDIDIEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGMKSTIAHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R G+ RPP M ++L KF A + ++ ++ + + L +
Sbjct: 123 SQQFNRIRLGVDRPPSGMTVPNYVLGKFTASEQPLVEEVVKASADACEAWLKEPFLSVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 KFN 185
>gi|153854682|ref|ZP_01995932.1| hypothetical protein DORLON_01930 [Dorea longicatena DSM 13814]
gi|149752786|gb|EDM62717.1| aminoacyl-tRNA hydrolase [Dorea longicatena DSM 13814]
Length = 194
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+GTRHNVGF++ID A+ IS++ +A G+G + VLL KP
Sbjct: 2 FIIAGLGNPTLQYEGTRHNVGFDVIDMLADRYNISVDGRKGRALVGKGIIEGQKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ + +LV +DD+ L G LR+R G GGHNG+K+++ N
Sbjct: 62 QTYMNLSGESLRELVNYYKIDEEHELLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAN 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L F+ RE ++ + ++L+ + +
Sbjct: 122 LGTDVFPRIKIGVGEKPKKYDLADYVLGHFSKEDRELMEEGYDRADHAVGMILNGEIEAA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MNQYN 186
>gi|434388107|ref|YP_007098718.1| peptidyl-tRNA hydrolase [Chamaesiphon minutus PCC 6605]
gi|428019097|gb|AFY95191.1| peptidyl-tRNA hydrolase [Chamaesiphon minutus PCC 6605]
Length = 205
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVG-DAPVLL 75
P L VGLGNPG KY TRHN+GF+ ID+ A+ IS+ + + +G+GF +A + +
Sbjct: 8 PQLIVGLGNPGTKYAQTRHNIGFDQIDSLAKRWQISLTDRKQFQGIYGEGFGSHNAKIRM 67
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KPQT+MNLSG+S ++KL VLV +DD+ LP G +RLR +G GGHNG+KS++
Sbjct: 68 LKPQTFMNLSGQSVRATLDWFKLSPESVLVIYDDLDLPLGKIRLRLSGSAGGHNGMKSII 127
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
++ GIG G+ D + +L KF+AI + + + +++ L +G+
Sbjct: 128 SHLGTQKFPRVRIGIGTSVGEKDTISHVLGKFSAIETPIVSEVIYLVNDAIEMSLKQGVE 187
Query: 187 ESARHFNT 194
++ +N+
Sbjct: 188 KAMSLYNS 195
>gi|359462044|ref|ZP_09250607.1| peptidyl-tRNA hydrolase [Acaryochloris sp. CCMEE 5410]
Length = 206
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 107/189 (56%), Gaps = 13/189 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAP-VLL 75
P L VGLGNPG KY TRHN+GF ID A+ IS+ + + +G+G G + V L
Sbjct: 8 PELIVGLGNPGSKYDRTRHNIGFAFIDRLAQHWQISLTSERRFQGEYGEGLGGQSRRVRL 67
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + ++KL VLV +D+M LP G LRLR G GGHNG++S++
Sbjct: 68 LKPHTYMNNSGQSIRAVIDWFKLEPTSVLVIYDEMALPVGKLRLRLKGSAGGHNGMRSII 127
Query: 136 NNF---------RGIGRPPGQ--MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
++ GIG PP + D +F+L +F + + L GV+ +++ L KG
Sbjct: 128 SHLGTPEVPRLRIGIGSPPPERGKDTISFVLGRFAPPENQLLPAVLDLGVDAVEMALKKG 187
Query: 185 LTESARHFN 193
+ +S FN
Sbjct: 188 IEQSMTLFN 196
>gi|452956509|gb|EME61900.1| peptidyl-tRNA hydrolase [Rhodococcus ruber BKS 20-38]
Length = 190
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 103/179 (57%), Gaps = 10/179 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG +Y+ TRHN+GF + D A G + A Q + V++AKP
Sbjct: 7 LVVGLGNPGPQYEKTRHNIGFMVADTLAARVGGKFSAHKRSNAEIVQARLDGRQVIIAKP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV---- 134
+TYMNLSG LA ++ + ++V HD++ L G +RL+ GG GHNGL+S+
Sbjct: 67 RTYMNLSGGPVAGLARFFSVEPADIVVVHDELDLDFGTVRLKLGGGENGHNGLRSISSAL 126
Query: 135 -----MNNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+ GIGRPPG+MDP ++L+ F++ R+ +D ++ + ++LLL GL E+
Sbjct: 127 GTKLYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLIREQAADAVELLLRVGLEEA 185
>gi|159896843|ref|YP_001543090.1| aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus DSM 785]
gi|229485507|sp|A9B7I9.1|PTH_HERA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|159889882|gb|ABX02962.1| Aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus DSM 785]
Length = 206
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG+KY RHNVGF+ + FA +S + A +G V V LA+P
Sbjct: 2 FLIVGLGNPGEKYLNNRHNVGFQCVAEFARRHHLSFDGKRSDARIAEGLVNGQRVALARP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN- 136
QT+MN SG+S L +YK+ P + +LV +DD+ LP G ++LR+ G GG G+ S++
Sbjct: 62 QTFMNDSGKSVVGLVNWYKIDPASELLVVYDDLDLPFGTIKLRNQGSSGGQRGMNSIIQL 121
Query: 137 -------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
R GIGRPP + F+L +NA RE + VE +L LS G+T++
Sbjct: 122 LGTQKFARLRFGIGRPPEGWEVINFVLGNWNAAERETLPKLYDRAVEACELCLSDGVTKA 181
Query: 189 ARHFN 193
N
Sbjct: 182 MNAVN 186
>gi|384208211|ref|YP_005593931.1| peptidyl-tRNA hydrolase [Brachyspira intermedia PWS/A]
gi|343385861|gb|AEM21351.1| putative peptidyl-tRNA hydrolase [Brachyspira intermedia PWS/A]
Length = 298
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 101/172 (58%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPGD+YK RHNVGF +ID AE+ I+ + K+ + + D +L KPQ
Sbjct: 5 LIIGLGNPGDEYKNNRHNVGFILIDKIAENFNINFDNNKKKSLYARAKEKDIEYILLKPQ 64
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++++ +
Sbjct: 65 TFMNLSGESAIFISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQ 124
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL-QEGVEVLKLLL 181
GIGRP ++L F+ RE +DT + + ++ +K+ L
Sbjct: 125 SDDFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREDLDTVIANDIIDAVKISL 176
>gi|313895642|ref|ZP_07829198.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975768|gb|EFR41227.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 195
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y T+HNVGF ++DA A+ G+S + + +G V L KPQ
Sbjct: 3 IIAGLGNPGAEYTQTKHNVGFILVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG + GP+ +YYK+ ++V HDDM +P G +R+R GG GGHNG+KS++++
Sbjct: 63 TYMNDSGSALGPMLSYYKIDTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHVG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP +L F+ + A+ + ++ +++ G+ +
Sbjct: 123 TEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDMAMN 182
Query: 191 HFNTIQK 197
FN +K
Sbjct: 183 RFNPRKK 189
>gi|402303199|ref|ZP_10822296.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC9]
gi|400379134|gb|EJP31982.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC9]
Length = 195
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y T+HNVGF ++DA A+ G+S + +G V L KPQ
Sbjct: 3 IIAGLGNPGAEYTQTKHNVGFMLVDALAQRLGVSAWKEAFSSLVAAVRIGSEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG + GP+ +YYK+ ++V HDDM +P G +R+R GG GGHNG+KS++++
Sbjct: 63 TYMNDSGSALGPMLSYYKIDTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHVG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP +L F+ + A+ + ++ L++ G+ +
Sbjct: 123 TEEFPRVRIGIGRPPVGWTVINHVLTPFSTDDASLVGEAIGYLLPAVEYLVTDGVDMAMN 182
Query: 191 HFNTIQK 197
FN +K
Sbjct: 183 RFNPRKK 189
>gi|451816996|ref|YP_007453197.1| peptidyl-tRNA hydrolase Pth [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451782975|gb|AGF53943.1| peptidyl-tRNA hydrolase Pth [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 191
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 101/184 (54%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GF+++D A+ I +N K +G+GF+ V+L KP
Sbjct: 2 FLIVGLGNPGKEYEDTRHNIGFKVVDNIAKEYNIQINRQKFKGIYGEGFINGQKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES + +Y + + +L+ +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 62 TTYMNLSGESVREVVNFYNIENDEILIIYDDISLDVGKLRIREKGSAGGHNGIKSIIAHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P D +L KF+ +D +++ ++ + +
Sbjct: 122 GSEVFSRIKIGVGQPNS--DLVKHVLGKFSKEEMVTLDESIEAATNATAEIIKNDVKTAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 NQFN 183
>gi|333896009|ref|YP_004469883.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111274|gb|AEF16211.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 190
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG +Y+ TRHNVGFE+ID+ ++ I++N + K+ G+G ++L KP
Sbjct: 2 YIVVGLGNPGKEYEKTRHNVGFEVIDSLSKKLDIAVNKIKFKSLIGEGIYKGEKIVLQKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QT+MN SGE+ + +YKLPL+ ++V +DD L G +R+R G GGHNG+KS++
Sbjct: 62 QTFMNSSGEAVYDIVDFYKLPLSNLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSIIYIL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+F GIG+P G M +L KF + + ++ + ++ G+ +
Sbjct: 122 NSEDFPRVRLGIGKPKGDM--IQHVLGKFEGRDMDIVANSIDNAANAVLDIIENGVEHAM 179
Query: 190 RHFN 193
+N
Sbjct: 180 NLYN 183
>gi|238922869|ref|YP_002936382.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|259535182|sp|C4ZBV8.1|PTH_EUBR3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238874541|gb|ACR74248.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|291523767|emb|CBK89354.1| peptidyl-tRNA hydrolase [Eubacterium rectale DSM 17629]
gi|291528768|emb|CBK94354.1| peptidyl-tRNA hydrolase [Eubacterium rectale M104/1]
Length = 186
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 105/181 (58%), Gaps = 11/181 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNP KY+ TRHN+GF++IDA A+ IS+ KA G G + VLL KP
Sbjct: 2 YVIVGLGNPDKKYEHTRHNIGFDVIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
QTYMNLSGES + +YKL P ++V DD+ L G +R+R G GGHNG+KS++
Sbjct: 62 QTYMNLSGESVAEVMNFYKLDPDEEMIVIFDDISLEPGRIRIRKKGSAGGHNGIKSIIAM 121
Query: 136 ---NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
F G+G P D +L +F++ R +++ A+ ++ +L+ +G T+
Sbjct: 122 TGTQGFSRIKVGVGEKPQGWDLADHVLGRFSSEDRAKVEEAIGHAMDA-AVLMMQGETDK 180
Query: 189 A 189
A
Sbjct: 181 A 181
>gi|429503586|ref|YP_007184770.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485176|gb|AFZ89100.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 188
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGIGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 123 TPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|154684572|ref|YP_001419733.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens FZB42]
gi|166199305|sp|A7Z0H6.1|PTH_BACA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154350423|gb|ABS72502.1| SpoVC [Bacillus amyloliquefaciens FZB42]
Length = 188
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHNVGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE P+ YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECLRPILDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 123 TPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|373107098|ref|ZP_09521398.1| peptidyl-tRNA hydrolase [Stomatobaculum longum]
gi|371652037|gb|EHO17463.1| peptidyl-tRNA hydrolase [Stomatobaculum longum]
Length = 190
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 101/184 (54%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+ TRHN GFE+ID A +S KA G+ +LL KP
Sbjct: 2 YIIAGLGNPGREYEKTRHNAGFEVIDRLAAKLEVSSWEKKHKALAGKAMYAGEKLLLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGES AA+Y++ + +LV DD+ L G LR+R +G GGHNGLKS+++N
Sbjct: 62 QTYMNLSGESLLSAAAFYRVTPDHILVISDDIDLAEGRLRIRKSGSAGGHNGLKSIISNL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P D ++L + E+++ A ++ E + +L +G+ +
Sbjct: 122 GSGDFIRVRVGVGSKPAGFDLADYVLGRAKGEDAEKMEQAYRDAAEAVLSILEEGVDRTM 181
Query: 190 RHFN 193
N
Sbjct: 182 NKVN 185
>gi|346307074|ref|ZP_08849219.1| peptidyl-tRNA hydrolase [Dorea formicigenerans 4_6_53AFAA]
gi|345907020|gb|EGX76738.1| peptidyl-tRNA hydrolase [Dorea formicigenerans 4_6_53AFAA]
Length = 194
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNP +Y+GTRHNVGF++ID AE I+++ +A G+G + VLL KPQ
Sbjct: 3 IIAGLGNPTKEYEGTRHNVGFQVIDKIAEKYNIAVDAKKGRAYVGKGIIEGQKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES L Y+K+ P +LV +DD+ L G +R+R G GGHNG+K+++
Sbjct: 63 TYMNLSGESIRELVDYFKVDPKEELLVIYDDISLNPGQIRIRKKGSAGGHNGIKNIIAQL 122
Query: 136 --NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ F+ G+G P D A++L F+ E ++ ++ + + +L + +
Sbjct: 123 GTDTFQRIKVGVGEKPKGYDLAAYVLGHFHGEDLELMEEGYEKAISATEEILKGEIDAAM 182
Query: 190 RHFN 193
+N
Sbjct: 183 NEYN 186
>gi|86608210|ref|YP_476972.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119391025|sp|Q2JNF7.1|PTH_SYNJB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86556752|gb|ABD01709.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 224
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG +Y TRHN GF ++D A+ GI + + ++G+GF L KP
Sbjct: 16 LVVGLGNPGPQYANTRHNCGFMVVDRLAQRWGIPLVLEKRFQGSYGEGFALGGKRRLLKP 75
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+TYMN SG+S + +YKL L VLV +DDM LP G LRLR +G GGHNG+KS++ +
Sbjct: 76 ETYMNRSGQSVRAVLDWYKLDLASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSIIQHL 135
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G+P G D +L F +E ++ L VE ++ +GL +
Sbjct: 136 GSEAFPRLRLGVGKPKGSQDVVGHVLGGFAPAEQEVLERVLDVAVEAVECCWQEGLRTAM 195
Query: 190 RHFNTIQ 196
FN +
Sbjct: 196 NRFNPLD 202
>gi|147669215|ref|YP_001214033.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|452203439|ref|YP_007483572.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi DCMB5]
gi|189038288|sp|A5FRL3.1|PTH_DEHSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146270163|gb|ABQ17155.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|452110498|gb|AGG06230.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi DCMB5]
Length = 189
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 102/186 (54%), Gaps = 12/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G + D ++LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG++ L Y L ++V DD+ LP G LRLR G GGHNG+ S++ +
Sbjct: 63 TYMNLSGKAVNQLLRRYNLKAADIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDIG 122
Query: 140 ---------GIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG+P + + +L F RE I+TA+ E L L++ GL
Sbjct: 123 TKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSGLDT 182
Query: 188 SARHFN 193
++ FN
Sbjct: 183 ASNRFN 188
>gi|77164044|ref|YP_342569.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|254435162|ref|ZP_05048669.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
gi|119390970|sp|Q3JDQ7.1|PTH_NITOC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76882358|gb|ABA57039.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|207088273|gb|EDZ65545.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
Length = 193
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 25/190 (13%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP------ 72
WL +GLGNPG +Y TRHN GF +DAFA GI+ G F GD
Sbjct: 6 WLLIGLGNPGTEYAQTRHNAGFWWLDAFASELGINFKP-------GAKFFGDYARANWRG 58
Query: 73 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
+ L KP T+MN SG++ L YY++PL +L+ HDD+ LP GV +L+ GGHGGHNG
Sbjct: 59 HDLWLLKPATFMNRSGQAVLALLNYYQIPLEHLLIAHDDLDLPPGVAKLKRAGGHGGHNG 118
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
L+ ++N G+G P D +++L + + R+ I+ A+ G+EVL +L
Sbjct: 119 LRDIINRLGRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIEAAIGAGLEVLPEVL 178
Query: 182 SKGLTESARH 191
+ G E A H
Sbjct: 179 A-GEMEKAMH 187
>gi|405983988|ref|ZP_11042293.1| peptidyl-tRNA hydrolase [Slackia piriformis YIT 12062]
gi|404388803|gb|EJZ83885.1| peptidyl-tRNA hydrolase [Slackia piriformis YIT 12062]
Length = 185
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPGD Y TRHN GF+ ID AE + C A + ++LAKPQ
Sbjct: 3 LIVGLGNPGDDYAHTRHNAGFDAIDDLAEQLRATYWKTECGALTAKVKYRGEELILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
+YMN+SG L A Y++ ++V HD++ + G +R++ GG GHNGLKS+ + +
Sbjct: 63 SYMNVSGGPVKQLCATYRIAPADIVVIHDELDIDPGTVRVKFGGGLAGHNGLKSIADKLQ 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+M ++L AR+ D A E + LL GL ++ +
Sbjct: 123 TKDWTRVRTGIGRPPGRMPVADWVLSLPKKEARDDFDQATHLAAEAVLFLLENGLEKTQQ 182
Query: 191 HFN 193
FN
Sbjct: 183 RFN 185
>gi|431807724|ref|YP_007234622.1| peptidyl tRNA hydrolase [Brachyspira pilosicoli P43/6/78]
gi|430781083|gb|AGA66367.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli P43/6/78]
Length = 198
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG++YK RHN+GF +ID A++ + + K+ F + + + +L KPQ
Sbjct: 4 LVIGLGNPGEEYKNHRHNIGFIIIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKPQ 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES ++ ++ + ++V +DDM +P G+ +++ G GGHNG+KS++ +
Sbjct: 64 TFMNLSGESAIYISKFFNIKPEDIIVIYDDMDIPFGIFKIKKGGSSGGHNGIKSLIAQLQ 123
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLLLSKGLTESA 189
GIGRP ++L F+ RE ID L E V E +K +L + T +
Sbjct: 124 TDDFIRLRVGIGRPSFGKKVNDYVLSSFSKSERENIDNDLGENVIEAIKTILFESYTIAQ 183
Query: 190 RHFN 193
+N
Sbjct: 184 NKYN 187
>gi|333373028|ref|ZP_08464947.1| aminoacyl-tRNA hydrolase [Desmospora sp. 8437]
gi|332971075|gb|EGK10045.1| aminoacyl-tRNA hydrolase [Desmospora sp. 8437]
Length = 197
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GF ++D AE I + KA G+G V V+L KP+
Sbjct: 8 VIVGLGNPGIRYALTRHNIGFWVVDRLAEEWKIPVEKERWKALVGEGRVNGEKVVLLKPE 67
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
TYMNLSGES P + K + +LV +DD+ LP G +RLR G GGH G++S+++
Sbjct: 68 TYMNLSGESVRPALEWLKCDVESLLVIYDDLDLPPGRIRLRMKGSAGGHRGVQSLVDHLG 127
Query: 137 --NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GIGRP + ++L +F E I A++ E ++ + E
Sbjct: 128 TQEFKRIKIGIGRPDVPIPIPDYVLSRFAREEEEPIAEAVERSAEAVQQWMEHPFPEVMN 187
Query: 191 HFNTIQ 196
FN Q
Sbjct: 188 RFNRNQ 193
>gi|408531356|emb|CCK29530.1| Peptidyl-tRNA hydrolase [Streptomyces davawensis JCM 4913]
Length = 198
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG-----DA 71
PWL VGLGNPG +Y RHNVGF ++D AE G +A +G +G +
Sbjct: 8 PWLIVGLGNPGPEYAMNRHNVGFMVVDLLAERIGGRFKRAGKAQAQVVEGRIGPPGPMNR 67
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP ++MNLSG L +YK+P+ ++ HD++ + G LRL+ GG GHNGL
Sbjct: 68 RVILAKPMSFMNLSGGPVNALKDFYKVPVANIVAIHDELDIDHGTLRLKLGGGDNGHNGL 127
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F+ R+ +D + + ++ L+ +
Sbjct: 128 KSMTKAMGSDYHRVRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVECLVIE 187
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 188 GLERAQGTYNS 198
>gi|366090578|ref|ZP_09456944.1| peptidyl-tRNA hydrolase [Lactobacillus acidipiscis KCTC 13900]
Length = 185
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G KY+ TRHNVGF +++ A + N C+A F+ + VLL KP
Sbjct: 3 MIVGLGNIGKKYENTRHNVGFSVVEELANRYNVDFNKEKCEALIATAFISNEKVLLVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+K+ + +++ HDDM L G +RLR G GGHNG+KSV+ +
Sbjct: 63 TFMNDSGRAVGPLLDYFKIEVEDLIIIHDDMDLQLGRIRLRQKGSAGGHNGIKSVIAHVH 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
GI P QM ++L +F+ + + A+ + + ++ L+
Sbjct: 123 TQAFKRIKVGIDHPQ-QMSVVNWVLSRFSVTEQALMKDAVTQACDAVEYWLA 173
>gi|15896464|ref|NP_349813.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum ATCC 824]
gi|337738423|ref|YP_004637870.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum DSM 1731]
gi|384459933|ref|YP_005672353.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
gi|21263854|sp|Q97E97.1|PTH_CLOAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15026289|gb|AAK81153.1|AE007817_7 Stage V sporulation protein C, peptidyl-tRNA hydrolase [Clostridium
acetobutylicum ATCC 824]
gi|325510622|gb|ADZ22258.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
gi|336291901|gb|AEI33035.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum DSM 1731]
Length = 187
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 106/187 (56%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG KY+ TRHN+GF+ I+ A IS++ K +G+G + V+L KP
Sbjct: 2 FLIVGLGNPGLKYEHTRHNMGFDAIENIAAKHNISIDKKGFKGLYGKGIIDGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A YYK+ ++V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 62 YTYMNLSGESVVEAANYYKINKENIVVIYDDISLDVGKIRIRTKGSAGGHNGIKNIVLHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P + ++L KF+ R++I+ L E ++ ++ G+ +
Sbjct: 122 SSEEFPRVKVGVGEPTENL--VNYVLGKFSQDERKKIEEVLNIVTEAVECMVVDGVQNAM 179
Query: 190 RHFNTIQ 196
FN ++
Sbjct: 180 NKFNGLK 186
>gi|335040913|ref|ZP_08534033.1| Peptidyl-tRNA hydrolase [Caldalkalibacillus thermarum TA2.A1]
gi|334179217|gb|EGL81862.1| Peptidyl-tRNA hydrolase [Caldalkalibacillus thermarum TA2.A1]
Length = 191
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY TRHN+GF +D AE GIS+N ++ G+ V VLL KP
Sbjct: 3 IIVGLGNPGPKYAQTRHNIGFLTVDRLAEKLGISINQEKWRSLVGETSVSGEKVLLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SGE+ + +++ P+ VLV +DD+ LP G +RLR GGHGGHNG++S++++
Sbjct: 63 TYMNRSGEAVIEVVRFFQCPVEDVLVIYDDLDLPFGTMRLRLKGGHGGHNGVRSLIDHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTESA 189
GIGRP D ++L F+ R+++ + G + L + T+
Sbjct: 123 SQTFKRIRMGIGRPENG-DVVHYVLNPFHPQERQQLAEFIDRGASAAEAYLDTDDFTQVM 181
Query: 190 RHFN 193
+N
Sbjct: 182 NRYN 185
>gi|296125816|ref|YP_003633068.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
gi|296017632|gb|ADG70869.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
Length = 205
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPGD+YK RHNVGF +ID AE+ ++ +T K+ + +G D +L KPQ
Sbjct: 5 LIIGLGNPGDEYKNNRHNVGFILIDKIAENLSLNFDTNKKKSLYTRGKSKDIEYILLKPQ 64
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSGES ++ ++ + + ++V +DDM +P G +++ G GGHNG+KS++
Sbjct: 65 TFMNLSGESAIYISKFFNVKTDDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQLH 124
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLLL 181
++F GIGRP ++L F+ E ++T + + V E +K L
Sbjct: 125 SDDFTRIRIGIGRPNAGKKVNDYVLSNFSKKEMEELNTVIADNVIEAVKTAL 176
>gi|402814487|ref|ZP_10864081.1| peptidyl-tRNA hydrolase Pth [Paenibacillus alvei DSM 29]
gi|402508334|gb|EJW18855.1| peptidyl-tRNA hydrolase Pth [Paenibacillus alvei DSM 29]
Length = 186
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y TRHN+GF ID+ A+ GI + CKA G+G VG ++L KP
Sbjct: 3 WI-VGLGNPGTEYAATRHNIGFMAIDSLADRFGIQVRESKCKALIGEGRVGTEKIVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGE+ YYK + +V +DDM G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGEAVRAYMDYYKADIEDFIVLYDDMDTELGKIRLRYQGSAGGHNGIKSLIQHL 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F + + ++ + ++ L ++
Sbjct: 122 GTQSFNRIRMGISRPEPGRSIVDYVLSTFPKAGADDLRQTIERTCDAVEFSLKHSFEQTM 181
Query: 190 RHFN 193
+N
Sbjct: 182 AKYN 185
>gi|445063566|ref|ZP_21375748.1| peptidyl-tRNA hydrolase [Brachyspira hampsonii 30599]
gi|444505055|gb|ELV05635.1| peptidyl-tRNA hydrolase [Brachyspira hampsonii 30599]
Length = 298
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPGD+YK RHNVGF +ID AE+ I+ + K+ + + + +L KPQ
Sbjct: 5 LIIGLGNPGDEYKNNRHNVGFILIDKIAENFNINFDNNKKKSLYARSKEKNIEYILLKPQ 64
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++++ +
Sbjct: 65 TFMNLSGESAIFISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQ 124
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG-VEVLKLLL 181
GIGRP ++L F+ RE +DT + + ++ +K+ L
Sbjct: 125 SDDFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTVIADDIIDAVKIAL 176
>gi|220908888|ref|YP_002484199.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
gi|219865499|gb|ACL45838.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
Length = 213
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 107/187 (57%), Gaps = 24/187 (12%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDA 71
+ RP L VGLGNPG+KY TRHN+GF ++DA A+ IS++ +A FG+G V A
Sbjct: 7 SPAVRPTLIVGLGNPGEKYYRTRHNIGFMVVDALADRWHISLSPHKRFQAEFGEGAVRGA 66
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V L KP TYMN SG+S + +YK VLV +DDM LP G LRLR NG GGHNG+
Sbjct: 67 TVQLLKPTTYMNNSGQSVRAVLDWYKRSPQSVLVVYDDMDLPLGKLRLRLNGSAGGHNGM 126
Query: 132 KSVMNNF---------RGIGRPP---GQMDPKAFLLQKFN-----------AIARERIDT 168
+S++ + GIG P G+ D +L KF+ +A + I+T
Sbjct: 127 RSLIAHLGTQDFPRLRLGIGNPRQAGGEKDAIPHVLGKFSPAEGPIVAEVLELATKAIET 186
Query: 169 ALQEGVE 175
+L++GVE
Sbjct: 187 SLRDGVE 193
>gi|225621396|ref|YP_002722655.1| peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
gi|225216217|gb|ACN84951.1| putative peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
Length = 297
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPGD+YK RHNVGF +ID A++ I+ + K+ + + D +L KPQ
Sbjct: 4 LIIGLGNPGDEYKNNRHNVGFILIDKIAQNFNINFDNNKKKSLYARSKEKDIEYILLKPQ 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++++ +
Sbjct: 64 TFMNLSGESAIFISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHLQ 123
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTAL-QEGVEVLKLLL 181
GIGRP ++L F+ RE +DT + + ++ +K+ L
Sbjct: 124 SDDFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTIIANDIIDAVKIAL 175
>gi|383754964|ref|YP_005433867.1| putative peptidyl-tRNA hydrolase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367016|dbj|BAL83844.1| putative peptidyl-tRNA hydrolase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 209
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 95/181 (52%), Gaps = 28/181 (15%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y T+HNVGF ++DA A+ GI A QGF+G +LL KP
Sbjct: 3 IIAGLGNPGSEYAATKHNVGFMLVDALADKLGIDNWQDKFDAKVAQGFIGTEKILLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG + GPL +YKL ++V HDDM +P G +R+R G GGHNG+KSV+ +
Sbjct: 63 TYMNESGRAIGPLLNFYKLDAEDLIVVHDDMDIPAGTVRIRKKGSAGGHNGIKSVLAHLG 122
Query: 139 --------RGIGRP-PG-------------QMDPKA-----FLLQKFNAIARERIDTALQ 171
GIGRP PG + PK +LL I E +D A+
Sbjct: 123 DEHFARVRIGIGRPLPGWTVVNHVLAPFIDEDKPKIKEAIHYLLPAVECIVTEDVDMAMN 182
Query: 172 E 172
+
Sbjct: 183 K 183
>gi|390933856|ref|YP_006391361.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569357|gb|AFK85762.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 190
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG +Y+ TRHNVGFE+ID+ ++ I++ + K+ G+G ++L KP
Sbjct: 2 YIVVGLGNPGKEYEKTRHNVGFEVIDSLSKKLDIAVKKIKFKSLIGEGLYKGEKIVLQKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QT+MN SGE+ + +YKLPL+ ++V +DD L G +R+R G GGHNG+KS++
Sbjct: 62 QTFMNSSGEAVYDIVDFYKLPLSNLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSIIYIL 121
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+F GIG+P G M +L +F + ++ ++ + + ++ G+ +
Sbjct: 122 NSEDFLRVRLGIGKPKGDM--IEHVLGRFEESDMDIVENSIDNAAKAVLDIIENGVEHAM 179
Query: 190 RHFN 193
+N
Sbjct: 180 NLYN 183
>gi|403069020|ref|ZP_10910352.1| peptidyl-tRNA hydrolase [Oceanobacillus sp. Ndiop]
Length = 187
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY+ TRHN+GF +I+ S++ + V+L +PQ
Sbjct: 3 LIVGLGNPGRKYRQTRHNIGFMVIEELLHRNQWSLDKAKFNGDYSMEHYEGEKVILLQPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGES PL YY L L+ VLV +DD+ LP G +RLR GGHGGHNG++S +++
Sbjct: 63 TYMNLSGESIRPLMDYYNLDLDDVLVIYDDLDLPTGKIRLRQKGGHGGHNGVRSTIDHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
G+GRP G + ++L F +E + +++ + + L
Sbjct: 123 TKEFKRIRLGVGRPVGPIPVVDYVLGAFPKEEQEDVIISIKNAADACESWLK 174
>gi|167039250|ref|YP_001662235.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300913890|ref|ZP_07131207.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307725425|ref|YP_003905176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
gi|238687630|sp|B0K466.1|PTH_THEPX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166853490|gb|ABY91899.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300890575|gb|EFK85720.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307582486|gb|ADN55885.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
Length = 184
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+GTRHNVGF +ID A+ G+++ + K+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 62 QTFMNSSGEALYDAVNFYKIPLENVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSIIYLL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D + +L KF ++ ID A+ + + + ++ G+ +
Sbjct: 122 NSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 SKFN 183
>gi|260893904|ref|YP_003240001.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
gi|260866045|gb|ACX53151.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
Length = 195
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKPQ 79
VGLGNPG Y TRHN+GF ++D A G+S V + + D V L KPQ
Sbjct: 9 VVGLGNPGPAYADTRHNLGFMVLDRLARQVGVSFAKEVKLCSRLAVLRLEDREVYLLKPQ 68
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE+ L +L +LV +DD+ LP G L+L +G GGH G+ SV+ +
Sbjct: 69 TYMNLSGEAVKLLVEKKELFPEEILVIYDDLDLPLGRLKLALSGSSGGHRGMGSVLESLG 128
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP +DP ++L F RE +D L+ V ++ L +G+ ++
Sbjct: 129 TTSVPRLRLGIGRPPAGLDPATYVLSPFAPEEREELDRVLERAVAAVECALQEGMAQAMN 188
Query: 191 HFNTIQ 196
FN Q
Sbjct: 189 KFNRRQ 194
>gi|363897751|ref|ZP_09324289.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB7]
gi|361958216|gb|EHL11518.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB7]
Length = 189
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 14/187 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAE---SQGISMNTVHCKATFGQGFVGDAPVLL 75
WL GLGNP KY GTRHN GF +IDA E +G+ H F + +G V++
Sbjct: 2 WLIAGLGNPEKKYNGTRHNAGFAVIDALLEMLGGKGLESTKFH--GAFTKLRIGTEEVVI 59
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSG+S P+ +YK+P +VLV D++ L G +R+R G GGHNGLKS++
Sbjct: 60 LKPLTYMNLSGDSIAPMVNFYKIPAEQVLVISDEISLSPGSIRIRKKGSAGGHNGLKSII 119
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
G+G + D A +L +F +R++ A E + ++++G+
Sbjct: 120 ARLGTEDFPRIRLGVGEKKEREDLAAHVLGRFEKEDEKRMEEAYTEAAKACICIVTEGIE 179
Query: 187 ESARHFN 193
++ +N
Sbjct: 180 KAMNLYN 186
>gi|427727442|ref|YP_007073679.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7524]
gi|427363361|gb|AFY46082.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7524]
Length = 211
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-G 69
+A+ P L VGLGNP KY TRHN+GF ++A A S I + + FG+G G
Sbjct: 7 SSALVIPQLIVGLGNPEPKYDQTRHNIGFAAVEALARSWQIPLAENRKFQGEFGEGIAPG 66
Query: 70 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
V L KP TYMN SG++ + ++YKLP VLV +DDM LP G RLR +G GGHN
Sbjct: 67 GVKVRLLKPLTYMNRSGQAIQAVTSWYKLPAESVLVIYDDMDLPIGKTRLRLSGSAGGHN 126
Query: 130 GLKSVM-----NNFR----GIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEGVE 175
G+KS + NF GIG+P + D +++L KF + + LQ VE
Sbjct: 127 GMKSAIAHLNTQNFPRLRIGIGKPKNAVNGDNSDTVSYVLGKFTTTETQLMSLVLQFVVE 186
Query: 176 VLKLLLSKGLTESARHFNT 194
++L L +G+ ++ N+
Sbjct: 187 CVELSLKQGVEKAMNRCNS 205
>gi|334119291|ref|ZP_08493377.1| Peptidyl-tRNA hydrolase [Microcoleus vaginatus FGP-2]
gi|333458079|gb|EGK86698.1| Peptidyl-tRNA hydrolase [Microcoleus vaginatus FGP-2]
Length = 220
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 22/196 (11%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP---- 72
P L VGLGNP KY TRHN+GF +DA A+S I+++ + TFG+G + P
Sbjct: 16 PQLIVGLGNPEPKYDRTRHNIGFNAVDALAKSWQIALSENRKFQGTFGEG---NRPRGQK 72
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
+ L KP TYMNLSG++ +YK+P VL+ +DDM LP G LR+R G GGHNG+K
Sbjct: 73 IRLLKPLTYMNLSGQAIRAATDWYKIPAESVLIVYDDMDLPIGKLRMRLAGSAGGHNGMK 132
Query: 133 SVMNNF---------RGIGRP-----PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
S +++ GIG+P + D +F+L KF++ + ++ L+ VE ++
Sbjct: 133 STISHLGTDKFPRLRIGIGKPQNDSAKNEKDTISFVLGKFSSEESQLVEKVLKLVVEAVE 192
Query: 179 LLLSKGLTESARHFNT 194
L L +G+ ++ +N+
Sbjct: 193 LSLHQGVEKAMSLYNS 208
>gi|365865380|ref|ZP_09405031.1| peptidyl-tRNA hydrolase [Streptomyces sp. W007]
gi|364005213|gb|EHM26302.1| peptidyl-tRNA hydrolase [Streptomyces sp. W007]
Length = 204
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 9 RGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGF 67
R + PWL VGLGNPG Y RHNVGF + D A G +A +G
Sbjct: 5 RALMSDATDPWLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVLEGR 64
Query: 68 VG-----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHN 122
+G V+L KP +YMNLSG L +YK+P + ++ HD++ + G+LRL+
Sbjct: 65 MGPPGPASRRVILVKPMSYMNLSGGPVTALRDFYKVPTDHIVAVHDELDVDYGMLRLKLG 124
Query: 123 GGHGGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 174
GG GHNGLKS+ GIGRPPG+M F+L+ F++ R+ ++ +
Sbjct: 125 GGDNGHNGLKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELEFLVDRSA 184
Query: 175 EVLKLLLSKGLTESARHFNT 194
+ ++ LL++GL + +N+
Sbjct: 185 DSVECLLAEGLERAQSAYNS 204
>gi|269125254|ref|YP_003298624.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
gi|268310212|gb|ACY96586.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
Length = 206
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG Y G RHN GF ++D A G +A +G + V+LAKP
Sbjct: 18 WLVVGLGNPGPDYAGNRHNAGFMVVDVLAGRMGGRFKAHKARAEVLEGRLAGRRVVLAKP 77
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+++MN SG L ++K+PL R+++ HD++ +P G +RL+ GG GGHNGL+S+ +
Sbjct: 78 RSFMNDSGGPVARLRDFFKVPLERIVIVHDELDIPYGAVRLKQGGGAGGHNGLRSISKSL 137
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+GRPPG+MD AF+L+ F+A R ++ LQ + +++LL++GL +
Sbjct: 138 GAPDYLRVRFGVGRPPGRMDAAAFVLRDFSAAERRDLELHLQVAADAVEMLLTQGLQAA 196
>gi|291445313|ref|ZP_06584703.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
gi|291348260|gb|EFE75164.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
Length = 197
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----DA 71
PWL VGLGNPG Y RHNVGF + D A G +A +G +G
Sbjct: 7 PWLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPASR 66
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+L KP +YMNLSG L +YK+P + V+V HD++ + G LRL+ GG GHNGL
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVVVHDELDVDYGALRLKLGGGDNGHNGL 126
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ + + + ++ LL++
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLAE 186
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 187 GLERAQSAYNS 197
>gi|452958433|gb|EME63786.1| peptidyl-tRNA hydrolase [Amycolatopsis decaplanina DSM 44594]
Length = 198
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y G RHNVGF ++D A G A +G + V+LAKP+
Sbjct: 14 LLVGLGNPGPQYAGNRHNVGFMVLDELAGRVGGKFKAHKSGAEILEGRLAGQRVVLAKPR 73
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
+YMNLSG A +YK+P V+V HD++ + G L+++ GG GHNGL+S+ +
Sbjct: 74 SYMNLSGGPVVGAARFYKIPPAGVVVVHDELDVDFGALKMKLGGGDNGHNGLRSITKSLG 133
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+GRPPG+ DP F+L+ F+ + R+ + + + ++ L+S GL +
Sbjct: 134 TKDYYRVRFGVGRPPGRQDPADFVLKDFSTVERKELAFEIDRCADAVEALISTGLAAAQN 193
Query: 191 HFNT 194
F+
Sbjct: 194 TFHA 197
>gi|302390886|ref|YP_003826706.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
gi|302202963|gb|ADL11641.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY TRHN+GF +ID FA+ + I + +A G + V+LAKPQ
Sbjct: 3 LVVGLGNPGFKYAATRHNIGFRVIDNFADKKQIKIEKEEQEALTGSLYFKGEKVILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG + G L +Y + V++ +DD+ L G LR++ +GGHGGHNG+KSV N+
Sbjct: 63 TYMNNSGRAVGKLVNWYDIAPENVIIIYDDLDLNTGHLRIKSSGGHGGHNGVKSVFNHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP M ++L KF+ R++ A++E VE + ++L +G+ ++
Sbjct: 123 STDISRIKIGIGRPPEYMTVPDYVLGKFDKEERDKAARAVREAVEAIGVILDQGIEQAMN 182
Query: 191 HFN 193
+N
Sbjct: 183 KYN 185
>gi|118473398|ref|YP_889671.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|399989670|ref|YP_006570020.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|166229422|sp|A0R3D3.1|PTH_MYCS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|399124831|pdb|2LGJ|A Chain A, Solution Structure Of Mspth
gi|118174685|gb|ABK75581.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|399234232|gb|AFP41725.1| Peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
Length = 191
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 117/195 (60%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG Y TRHN+GF + D A G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIG-SAFKVHKKSGAEVVTGRLAGTS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y +P +++V HD++ + G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV + NF G+GRPPG+ DP AF+L+ F A R + T +++ + +LL+++
Sbjct: 120 SVASALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELLIAQ 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|336066935|ref|YP_004561793.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296881|dbj|BAK32752.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 182
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 77/119 (64%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ TRHN GF +ID A G+S++T KA + FVG V+L KPQ
Sbjct: 3 VIVGLGNPGKQYENTRHNAGFLVIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSGES G + YY + L +LV DDM + G LRLR G GG G+KS++++
Sbjct: 63 TFMNLSGESVGEVMRYYDVDLEDLLVISDDMDITVGSLRLREKGSSGGQKGVKSIIDHL 121
>gi|342215023|ref|ZP_08707692.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590129|gb|EGS33378.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 780 str.
F0422]
Length = 192
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 100/167 (59%), Gaps = 13/167 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG Y+GTRHN+GF ++DA A+ + KA + VLL KPQ
Sbjct: 3 LIVGLGNPGRDYEGTRHNIGFMVVDAIADGVSHTPWREDYKAELCSCTIAGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
T+MNLSGES GPL YYKL V V +DDM LP G +R+R NG GGHNG+KS+++
Sbjct: 63 TFMNLSGESVGPLMRYYKLTPEDVYVIYDDMDLPVGKIRIRPNGSAGGHNGIKSMISHLG 122
Query: 137 -----NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
+FR GIGRP + +L +F E+ DT +++GV+ +
Sbjct: 123 TDGFPHFRFGIGRPLPEWTVVDHVLSRF---PEEQQDT-VKKGVKAM 165
>gi|256374802|ref|YP_003098462.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
gi|255919105|gb|ACU34616.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
Length = 189
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGN G KY+GTRHN GF ++D A+ G A +G + V+LAKP+
Sbjct: 7 LVVGLGNSGPKYEGTRHNAGFLVLDELADRVGGRFKAHKGGAEVVEGRLAGQRVVLAKPR 66
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
YMN SG A +YK V+V HD++ LP G +RL+ GG GHNGL+S+ +
Sbjct: 67 GYMNNSGGPVSGTAKFYKAQPASVIVVHDELDLPFGAVRLKLGGGDNGHNGLRSITRSLG 126
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+ RPPG+MDP ++L+ F+ + R+++ L + ++ L+S GL +
Sbjct: 127 TKDYLRVRFGVDRPPGRMDPADYVLKDFSVVERKQLALELDRAADAVEALVSSGLEAAQN 186
Query: 191 HFN 193
F+
Sbjct: 187 QFH 189
>gi|229829773|ref|ZP_04455842.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
gi|229791762|gb|EEP27876.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
Length = 212
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG+KY+ +RHN GF+ ID A+ GI + + +A +G+G + VLL KP
Sbjct: 14 YMIAGLGNPGEKYRHSRHNAGFDTIDRLADQYGICLREMKFEALYGKGLIEGRQVLLVKP 73
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
TYMN SG S +Y+L PL +LV DD+ L CGV+R+R G GGHNGLKS++
Sbjct: 74 TTYMNDSGRSLQQFVRFYQLDPLEDMLVISDDVTLDCGVIRVRKQGSAGGHNGLKSIIAC 133
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G+ P D A +L + RE + + E +++ + E+
Sbjct: 134 LGTDCFPRVRVGVGKVPTGGDMIAHVLGRIRPEERENMALGEEHAAEAAVMVMEGQIVEA 193
Query: 189 ARHFNTIQ 196
+N ++
Sbjct: 194 MNRYNGMR 201
>gi|381210581|ref|ZP_09917652.1| peptidyl-tRNA hydrolase [Lentibacillus sp. Grbi]
Length = 186
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG KY TRHNVGF +ID A G + ++L +PQT
Sbjct: 4 IVGLGNPGKKYVKTRHNVGFMVIDELAGRNGWKLKKDKFSGKSTVETSEGEKIILLQPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
+MNLSGES PL +Y++ +LV DD+ LP G +RLR GGHGGHNG++S++
Sbjct: 64 FMNLSGESVRPLMNFYQMKPEDILVIFDDLDLPTGKIRLRQKGGHGGHNGIRSIIDHLGT 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
N R GIGRP + ++L+ F+ +E + +++++ + + K E
Sbjct: 124 KEFNRLRIGIGRPDTAVPVVDYVLKPFSKAQQEDVQSSIEKSANACETWMQKPFAEVMND 183
Query: 192 FNT 194
FN+
Sbjct: 184 FNS 186
>gi|328949925|ref|YP_004367260.1| peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
gi|328450249|gb|AEB11150.1| Peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
Length = 194
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV--HCKATFGQGFVGDAPVLLAK 77
L VGLGNPG +Y TRHNVGF ++D + G+ T A +G G+ L K
Sbjct: 5 LIVGLGNPGPRYARTRHNVGFMILDRLDQDLGLDWRTRGNALVARWGAGW-------LMK 57
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMNLSGE+ P YY++PL R+LV HDD+ LP G LR R G GG G+ S++ +
Sbjct: 58 PLTYMNLSGEAVAPFVRYYRIPLARLLVVHDDLDLPLGRLRFRARGSSGGQRGVASIIAH 117
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPP ++L FN + + E +++ L +GL +
Sbjct: 118 LGSEAFPRLKVGIGRPPAGWSAPDWVLSPFNPEELPLVTRVVDRAAEGVRVWLEEGLARA 177
Query: 189 ARHFNTIQ 196
+ +N +
Sbjct: 178 QQRYNGLD 185
>gi|323342262|ref|ZP_08082494.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463374|gb|EFY08568.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 186
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 77/119 (64%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ TRHN GF +ID A G+S++T KA + FVG V+L KPQ
Sbjct: 7 VIVGLGNPGKQYENTRHNAGFLVIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVKPQ 66
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSGES G + YY + L +LV DDM + G LRLR G GG G+KS++++
Sbjct: 67 TFMNLSGESVGEVMRYYDVDLEDLLVISDDMDITVGSLRLREKGSSGGQKGVKSIIDHL 125
>gi|238926854|ref|ZP_04658614.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
gi|238885386|gb|EEQ49024.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
Length = 208
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 9/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y T+HNVGF +IDA AE +S ++ + +G + L KP
Sbjct: 3 LIAGLGNPGAEYANTKHNVGFMLIDALAEHLNVSAWKEDFSSSVAEARIGGEKIFLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMN SGE+ GP+ +YYKL ++V HDDM +P G +R+R G GGHNG+KS++++
Sbjct: 63 TYMNNSGEAIGPMLSYYKLSSEDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILSHVG 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP +L F +I + + + +++ G +
Sbjct: 123 SEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIRETIAYLLPAVTCIVTDGTDFAMN 182
Query: 191 HFNTIQKYK 199
+N +K K
Sbjct: 183 RYNPHRKKK 191
>gi|167766178|ref|ZP_02438231.1| hypothetical protein CLOSS21_00672 [Clostridium sp. SS2/1]
gi|317499347|ref|ZP_07957617.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762584|ref|ZP_19294972.1| aminoacyl-tRNA hydrolase [Anaerostipes hadrus DSM 3319]
gi|167712258|gb|EDS22837.1| aminoacyl-tRNA hydrolase [Clostridium sp. SS2/1]
gi|291560115|emb|CBL38915.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SSC/2]
gi|316893382|gb|EFV15594.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181404|gb|EKY22567.1| aminoacyl-tRNA hydrolase [Anaerostipes hadrus DSM 3319]
Length = 188
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 108/187 (57%), Gaps = 17/187 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY TRHN+GFE +D A+ +GIS+NT KA G G++G VLL KPQ
Sbjct: 3 VIVGLGNPGKKYDNTRHNIGFEALDYIADKEGISINTGKHKALIGTGYMGGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES P+ +YKL ++ HDD+ L G LR+R G GGHNGLKS++++
Sbjct: 63 TFMNLSGESLRPIMDFYKLEPEDFIIIHDDIDLDVGRLRIRRKGSAGGHNGLKSIISHLG 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLKLLLSKGLT 186
G+G P D ++L F AI ER D E + ++L++ +T
Sbjct: 123 SMDFPRVKIGVGEKPKGYDLADYVLGHFTKEEQAIFAERFD----EVYDAVQLIVMGDIT 178
Query: 187 ESARHFN 193
E+ N
Sbjct: 179 EAMNRHN 185
>gi|251794073|ref|YP_003008804.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
gi|247541699|gb|ACS98717.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
Length = 186
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG Y+ TRHNVGF +ID A I + CKA G+G V V+L KP
Sbjct: 3 WI-VGLGNPGTTYQSTRHNVGFMVIDELARRWNIQVTQSKCKALIGEGNVQGTKVVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES Y+K L L+ +DDM G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGESVRGFMDYFKADLEDGLIVYDDMDTEVGKVRLRYQGSAGGHNGIKSLIQHL 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R G+ RP + ++L F +E + + +++ + ++ L +
Sbjct: 122 GTQQFNRIRMGVSRPQPGRNIADYVLDNFPKSEQEALKSMIEQACDAVEYSLKASFDNTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|119508860|ref|ZP_01628012.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
gi|119466389|gb|EAW47274.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
Length = 209
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLL 75
P L VGLGNP KY TRHN+GF IDA + S I + + +G+G G + L
Sbjct: 13 PQLIVGLGNPEPKYDQTRHNIGFAAIDALSRSWHIPLGENRKFQGEYGEGIAPGSRKIRL 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + ++YKLP VLV +DDM LP G RLR +G GGHNG+KS +
Sbjct: 73 LKPLTYMNRSGQSIQAVTSWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTI 132
Query: 136 NNFR---------GIGRPPGQMDPKAF--LLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
++ GIG+P + ++ +L KF+A + I LQ VE ++L L +G
Sbjct: 133 SHLNTQNFPRLRIGIGKPNDSDNSESISHVLGKFSAAETQLISVLLQFVVECVELSLKQG 192
Query: 185 LTESARHFNT 194
+ ++ N+
Sbjct: 193 VEKAMNRCNS 202
>gi|254423495|ref|ZP_05037213.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
gi|196190984|gb|EDX85948.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
Length = 220
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 15/195 (7%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAES-QGISMN-TVHCKATFGQGFVGDA 71
V RP L VGLGNPG KY+ TRHN+GFE+IDA A S +S+ + G+ +
Sbjct: 20 TVVRPRLIVGLGNPGTKYERTRHNIGFEIIDALANSFSNVSLTPNKRFQGATGEFWSAGE 79
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+L KP TYMN SG++ + +YKL VLV +DDM LP G LR+R +GG GGHNG+
Sbjct: 80 RVVLLKPTTYMNRSGQAVRAVLDWYKLEPTAVLVIYDDMDLPTGRLRMRLSGGAGGHNGM 139
Query: 132 KSVMNNF---------RGIGRPPGQMDPK----AFLLQKFNAIARERIDTALQEGVEVLK 178
KS++++ G+G D + +L +F+ R+ +D + V+ +
Sbjct: 140 KSIISHLGTKEFPRLRVGVGSADKSGDRDGAVVSHVLGRFSPSDRKIVDAVIPMAVDAVD 199
Query: 179 LLLSKGLTESARHFN 193
L L KG+ S +N
Sbjct: 200 LSLRKGVERSMNLYN 214
>gi|56961863|ref|YP_173585.1| peptidyl-tRNA hydrolase [Bacillus clausii KSM-K16]
gi|68052898|sp|Q5WAD6.1|PTH_BACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56908097|dbj|BAD62624.1| peptidyl-tRNA hydrolase stage V sporulation protein C [Bacillus
clausii KSM-K16]
Length = 185
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY+ TRHN+GF++ID A+ + ++ KA +G+ +G V+L KP
Sbjct: 3 LVVGLGNPGKKYEHTRHNIGFDIIDRCAQKLDLPLDKQKFKAIYGEKRIGSEKVVLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE+ P Y+ + + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TYMNLSGEAVRPFMDYFNISNDELVVIYDDLDLPVGKIRLRKKGSAGGHNGIKSLIAHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GIGRP ++L + ++ A ++ + ++ L K E
Sbjct: 123 TEDFNRIRVGIGRPAHGEPVVHYVLDTYRKEELAFMNEAAEKSAKAIEAWLEKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 TFN 185
>gi|295108813|emb|CBL22766.1| peptidyl-tRNA hydrolase [Ruminococcus obeum A2-162]
Length = 192
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GF++ID E + V A +G+G +G PV+L KP
Sbjct: 2 YLIVGLGNPGRQYEATRHNMGFDVIDKLVEEYQVPQAGVKFNAMYGKGRIGGQPVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
+YMNLSG +A Y+K+ P ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 62 LSYMNLSGGPIREMANYFKIDPETEMIVVYDDIDLDPGQLRIRKKGSAGGHNGIKHIIQQ 121
Query: 136 ---NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF G+G P D ++L +F+ R I+ A + + ++L+L+ + +
Sbjct: 122 LGTQNFVRIKVGVGAKPKGWDLADYVLGRFDKEDRALIEEAQERACKAVELILTDSVDAA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MNEYN 186
>gi|182438174|ref|YP_001825893.1| peptidyl-tRNA hydrolase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466690|dbj|BAG21210.1| putative peptidyl-tRNA hydrolase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 204
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 9 RGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGF 67
R + PWL VGLGNPG Y RHNVGF + D A G +A +G
Sbjct: 5 RALMSDATDPWLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGR 64
Query: 68 VG-----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHN 122
+G V+L KP +YMNLSG L +YK+P + V+ HD++ + G+LRL+
Sbjct: 65 MGPPGPGSRRVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGMLRLKLG 124
Query: 123 GGHGGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 174
GG GHNGLKS+ GIGRPPG+M F+L+ F++ R+ + +
Sbjct: 125 GGDNGHNGLKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSA 184
Query: 175 EVLKLLLSKGLTESARHFNT 194
+ ++ LL++GL + +N+
Sbjct: 185 DAVECLLAEGLERAQSAYNS 204
>gi|291439150|ref|ZP_06578540.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291342045|gb|EFE69001.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
Length = 200
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 110/197 (55%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T A PWL VGLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 4 TTDAAAPWLIVGLGNPGPEYAMNRHNVGFMVADLLAERMGGRFKRAGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V+LAKP +YMNLSG L +YK+P+ V+ HD++ + GVLRL+ GG
Sbjct: 64 PGPANRRVVLAKPMSYMNLSGGPVNALREFYKVPVAHVVAVHDELDIGYGVLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ F GIGRPPG+M F+L+ F++ R+ +D + + +
Sbjct: 124 NGHNGLKSMTKAFGADYHRVRFGIGRPPGRMQVADFVLRDFSSAERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+S+GL + +N+
Sbjct: 184 ECLVSEGLERAQSAYNS 200
>gi|389576690|ref|ZP_10166718.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
gi|389312175|gb|EIM57108.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
Length = 189
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG KY T+HN+GF+ I + I KA +G+G +G V+L KP
Sbjct: 2 FLIAGLGNPGRKYDRTKHNMGFDTITELVDRWNIPQGGTDMKAMYGKGLIGGQKVMLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
TYMNLSGES YYK+ P + +LV +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 LTYMNLSGESIAAYVNYYKVDPESELLVIYDDISLDPGQLRIRKKGSAGGHNGMKNIIQH 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIG P D ++L F+ RE +D + + +++++ + +
Sbjct: 122 LGTDKFARIRVGIGDKPAGWDLADYVLAPFSKADRELVDAGIGRAADAAEMIVAGEIDRA 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNTFN 186
>gi|328956570|ref|YP_004373956.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
gi|328672894|gb|AEB28940.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
Length = 191
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D FA + + +A + + FVG VLL KPQ
Sbjct: 3 MIVGLGNPGTKYKNTKHNIGFITVDEFAIQHKMEFSKTKFEALYAEAFVGTEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG + L Y+ + + ++V +DD+ LP G LRLR G GGHNG+KS++
Sbjct: 63 TFMNDSGRAVRQLMDYFNVEVEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGIKSIIQHID 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
N R GI RP G+ +L F+ E + +++ V L +
Sbjct: 123 TSDFNRIRIGIDRPMGKQTVIQHVLSGFHKSQHEELLITIKDSVAALDYWIE 174
>gi|300871524|ref|YP_003786397.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|404476577|ref|YP_006708008.1| peptidyl tRNA hydrolase [Brachyspira pilosicoli B2904]
gi|434381585|ref|YP_006703368.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli WesB]
gi|300689225|gb|ADK31896.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|404430234|emb|CCG56280.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli WesB]
gi|404438066|gb|AFR71260.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli B2904]
Length = 198
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG++YK RHN+GF +ID A++ + + K+ F + + + +L KPQ
Sbjct: 4 LVIGLGNPGEEYKNHRHNIGFIIIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKPQ 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++ +
Sbjct: 64 TFMNLSGESAIYISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQLQ 123
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLLLSKGLTESA 189
GIGRP ++L F+ RE ID L E V E +K +L + T +
Sbjct: 124 TDDFIRLRVGIGRPSFGKKVNDYVLSSFSKSERENIDNDLGENVIEAIKTILFESYTIAQ 183
Query: 190 RHFN 193
+N
Sbjct: 184 NKYN 187
>gi|325288388|ref|YP_004264569.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
gi|324963789|gb|ADY54568.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
Length = 185
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTY 81
+GLGNPG KY TRHNVGF ++D A ++ + + K F + + ++L KP T+
Sbjct: 5 IGLGNPGIKYADTRHNVGFMLLDRIAGNEDVQYSK-GFKGKFAEIRHQNRKIILLKPYTF 63
Query: 82 MNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF--- 138
MNLSG+S L YYK+PL +LV HDDM + G LR R G GGHNG+KS++
Sbjct: 64 MNLSGQSVAELINYYKVPLEDMLVIHDDMDIALGRLRFREKGSAGGHNGIKSIIQELGTQ 123
Query: 139 ------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHF 192
G+GRP + D + +L F+ +RE + L++ + + L L E+ +++
Sbjct: 124 EFWRLKIGVGRPQKERDVVSHVLSGFDRESREVLSETLEKARKAVFLWLEGKEAEAMQNY 183
Query: 193 NT 194
N+
Sbjct: 184 NS 185
>gi|428317242|ref|YP_007115124.1| peptidyl-tRNA hydrolase [Oscillatoria nigro-viridis PCC 7112]
gi|428240922|gb|AFZ06708.1| peptidyl-tRNA hydrolase [Oscillatoria nigro-viridis PCC 7112]
Length = 220
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 22/196 (11%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP---- 72
P L VGLGNP KY TRHN+GF +DA A+S IS++ + FG+G + P
Sbjct: 16 PQLIVGLGNPEPKYDRTRHNIGFNAVDALAKSWQISLSENRKFQGIFGEG---NRPRGQK 72
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
+ L KP TYMNLSG++ +YK+P VL+ +DDM LP G LR+R G GGHNG+K
Sbjct: 73 IRLLKPLTYMNLSGQAIRAATDWYKIPAESVLIVYDDMDLPIGKLRMRLAGSAGGHNGMK 132
Query: 133 SVMNNF---------RGIGRP-----PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
S +++ GIG+P + D +F+L KF++ + ++ L+ VE ++
Sbjct: 133 STISHLGTDKFPRLRIGIGKPQNDAAKNEKDTISFVLGKFSSEESQLVEKVLKLVVEAVE 192
Query: 179 LLLSKGLTESARHFNT 194
L L +G+ ++ +N+
Sbjct: 193 LSLHQGVEKAMSLYNS 208
>gi|374321392|ref|YP_005074521.1| peptidyl-tRNA hydrolase [Paenibacillus terrae HPL-003]
gi|357200401|gb|AET58298.1| peptidyl-tRNA hydrolase [Paenibacillus terrae HPL-003]
Length = 186
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y+ TRHNVGF +DA A I +N CKA G+G +G +L KP
Sbjct: 3 WI-VGLGNPGPQYEKTRHNVGFMALDALAARHNIQINQSKCKALIGEGHIGGMKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES YYK ++ ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGESLRAYMDYYKADIDDLVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F +E + +++ + L+ L +
Sbjct: 122 GTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEKELLAGMIEDTCDALEYSLGHPFERTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AEFN 185
>gi|229917411|ref|YP_002886057.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
gi|259535188|sp|C4KZU9.1|PTH_EXISA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229468840|gb|ACQ70612.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
Length = 185
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG K++ TRHNVGF ID AE GIS+N A G G + V+L KP T
Sbjct: 4 IVGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
YMNLSGE+ P+ YYK+ ++ +LV +DD+ + G LR R G GGHNG+KS++ +
Sbjct: 64 YMNLSGEAVRPILDYYKIEIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQHLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 174
GIGRPP + ++L + ++ L V
Sbjct: 124 AEFKRLKLGIGRPPHPIKVVDWVLMNYRKDELPELNETLDNAV 166
>gi|411003251|ref|ZP_11379580.1| peptidyl-tRNA hydrolase [Streptomyces globisporus C-1027]
Length = 197
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----DA 71
PWL VGLGNPG Y RHNVGF + D A G +A +G +G
Sbjct: 7 PWLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPASR 66
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNGL
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGSLRLKLGGGDNGHNGL 126
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ ++ + + ++ LL++
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELEFLVDRSADAVECLLAE 186
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 187 GLERAQSAYNS 197
>gi|310657788|ref|YP_003935509.1| peptidyl-tRNA hydrolase [[Clostridium] sticklandii]
gi|308824566|emb|CBH20604.1| peptidyl-tRNA hydrolase [[Clostridium] sticklandii]
Length = 186
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG KY+ TRHNVGF +D A GI +N + K+ G+G +G V+L KP
Sbjct: 2 YLIVGLGNPGSKYEKTRHNVGFVTVDVLAGQLGIKVNKLKFKSLIGEGNIGSEKVVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
QTYMNLSGE+ +YK +++ V +DD+ L G LR+R G G HNG+++++
Sbjct: 62 QTYMNLSGEAVMQAINFYKPDHDKIFVIYDDIDLDVGRLRIRKKGSGGTHNGMRNIIYLT 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR G+ +P D +F+ FN + + A+ + + L + + + ++
Sbjct: 122 GFDDFPRFRIGVSKPKNGQDLASFVTSGFNKDEIKPLCEAIDNAADAIVLAIKEDIDKAM 181
Query: 190 RHFNT 194
+N
Sbjct: 182 NKYNV 186
>gi|158321664|ref|YP_001514171.1| peptidyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
gi|167011988|sp|A8MK43.1|PTH_ALKOO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158141863|gb|ABW20175.1| Aminoacyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
Length = 185
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 16/186 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY TRHN+GFE ID A+ I + + KA G+G +G VLL KPQ
Sbjct: 3 IIVGLGNPGKKYDATRHNIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSG+S + +YK+ ++V +DD+ +P G LR+R G G HNG+KS++ +
Sbjct: 63 TFMNLSGQSLLDIVQFYKVDPKNIVVLYDDIDIPVGTLRIREKGSSGTHNGMKSIIYLLQ 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDT---ALQEGVEVLKLLLSKGLTE 187
G+G+P D ++L +F +E I T L+ + ++ L+ G+
Sbjct: 123 TDQFPRIRIGVGKPQFG-DLADYVLGRF---PKEEIPTMLETLERASQAVETLVKDGIAV 178
Query: 188 SARHFN 193
S +N
Sbjct: 179 SMNRYN 184
>gi|41407076|ref|NP_959912.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254774033|ref|ZP_05215549.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp. avium ATCC
25291]
gi|417747057|ref|ZP_12395535.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776568|ref|ZP_20955408.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|68052977|sp|Q741V9.1|PTH_MYCPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41395427|gb|AAS03295.1| Pth [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461343|gb|EGO40214.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436723246|gb|ELP47092.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 191
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPGD Y TRHNVGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNVGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLAGRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N +F+ GIGRPPG+ DP AF+L+ F + R + T ++ + +LL+
Sbjct: 120 SVANALGSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIEL 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|54026867|ref|YP_121109.1| peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
gi|68052906|sp|Q5YPZ6.1|PTH_NOCFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54018375|dbj|BAD59745.1| putative peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
Length = 193
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 12/179 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLL 75
P L VGLGNPG +Y+ TRHNVGF + D AE G VH K A Q + VL+
Sbjct: 8 PALVVGLGNPGSEYERTRHNVGFLVADVLAERVGDRF-AVHKKSGADLLQARLDGRQVLI 66
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP++YMNLSG LA ++ +P V+V HD++ LP G +RL+ GG GGHNGL+S+
Sbjct: 67 AKPRSYMNLSGRPVAALARFFSVPPTEVIVVHDELDLPFGAVRLKRGGGEGGHNGLRSIS 126
Query: 136 NNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+ DP F+L+ F A R+ + +++ + ++LLL GL
Sbjct: 127 SALTTKDYLRTRIGIGRPPGRQDPADFVLKPFAAAERKEVPVIVEQAADAVELLLRVGL 185
>gi|429205501|ref|ZP_19196773.1| peptidyl-tRNA hydrolase [Lactobacillus saerimneri 30a]
gi|428146112|gb|EKW98356.1| peptidyl-tRNA hydrolase [Lactobacillus saerimneri 30a]
Length = 185
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 97/168 (57%), Gaps = 10/168 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G KY+ TRHNVGF ++D A++ G + A + F+ VLL KP
Sbjct: 3 MVVGLGNIGKKYEATRHNVGFMVVDELAQAYGATFAKEKMNALVTEIFIAGEKVLLVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
TYMN SG + PL +YK+P+ +++ HDDM L G LRLR G GGHNG+KS+++
Sbjct: 63 TYMNESGRAVRPLMDFYKIPVEDIIICHDDMDLDIGKLRLRQKGSAGGHNGIKSIISHVG 122
Query: 137 --NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
+F+ GIG P +M ++L +F+ + I + +GV ++
Sbjct: 123 TQSFKRLRVGIGHPD-KMTVVDWVLSRFSQAQKAVITDTIADGVAAIE 169
>gi|325282473|ref|YP_004255014.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
gi|324314282|gb|ADY25397.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
Length = 210
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 16/190 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQG----ISMNTVHCKATFGQGFVGDA--PV 73
L VGLGNPG+KY TRHNVG+ ++D A G C+ GQG G A V
Sbjct: 3 LIVGLGNPGEKYAATRHNVGWLVVDELARRTGGHWRKDGEAETCEVRLGQGG-GQAGEKV 61
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
LL KPQT+MN SG + PL +YY+L + +LV DD+ P G+L+LR G HGG NGL+
Sbjct: 62 LLVKPQTFMNSSGRAVAPLLSYYRLAPDDLLVVQDDLDSPFGLLKLRRGGRHGGQNGLRD 121
Query: 134 VM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
++ +F GI RPP DP ++L ++ R ++ + G + ++ +G
Sbjct: 122 IIRLLGTQDFDRLKIGISRPPPGRDPADWVLSRWAEAERPVLERLVDLGAQAAEVWTLQG 181
Query: 185 LTESARHFNT 194
+ E+ FN+
Sbjct: 182 MQEAQGRFNS 191
>gi|168334868|ref|ZP_02692990.1| peptidyl-tRNA hydrolase [Epulopiscium sp. 'N.t. morphotype B']
Length = 187
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG KY T+HN GF +D A GI+MN + G+G + +LL KP
Sbjct: 3 LVIGLGNPGAKYVATKHNAGFYAVDYLAHYYGIAMNKNRFRGISGEGIIEGEKILLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES +YKL +LV +DD GV++++ G GGHNG+K+++ + +
Sbjct: 63 TFMNLSGESLIECMNFYKLTAEEILVIYDDTAFETGVIKMKRTGSAGGHNGIKNIIEHIK 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP ++L KF + E+I ++ + + ++K + +
Sbjct: 123 TQNFPRARIGIGRPPEGYLLVDYVLSKFTDMEIEKIKDSMPSFKDAVTTFVTKDIEAAMN 182
Query: 191 HFNTI 195
N I
Sbjct: 183 KLNAI 187
>gi|308066874|ref|YP_003868479.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa E681]
gi|305856153|gb|ADM67941.1| Peptidyl-tRNA hydrolase (PTH) [Paenibacillus polymyxa E681]
Length = 186
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y+ TRHNVGF +DA A I +N CKA G+G +G +L KP
Sbjct: 3 WI-VGLGNPGPQYEKTRHNVGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES YYK + ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGESLRAYMDYYKADMEDLVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F ++ + +++ L+ LS +
Sbjct: 122 GTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKDLLAGMIEDTCNALEYSLSHPFERTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AEFN 185
>gi|456385230|gb|EMF50798.1| pth protein [Streptomyces bottropensis ATCC 25435]
Length = 200
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T + PWL LGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 4 TTDPSAPWLVASLGNPGPEYAANRHNVGFMVADLLAERIGGRFKRAGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V+LAKP ++MNLSG L +YK+P+ ++ HD++ + G LRL+ GG
Sbjct: 64 PGPANRRVILAKPMSFMNLSGGPVTALRDFYKVPVANIVAIHDELDIDYGALRLKFGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ GIGRPPG+M F+L+ F+A R+ +D + + +
Sbjct: 124 NGHNGLKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 ECLVIEGLERAQGTYNS 200
>gi|118465371|ref|YP_880401.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
gi|166227336|sp|A0QBW3.1|PTH_MYCA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118166658|gb|ABK67555.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
Length = 191
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPGD Y TRHNVGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNVGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLAGRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N +F+ GIGRPPG+ DP AF+L+ F + R + T ++ + +LL+
Sbjct: 120 SVSNALGSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIEL 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|339443834|ref|YP_004709838.1| peptidyl-tRNA hydrolase [Eggerthella sp. YY7918]
gi|338903586|dbj|BAK43437.1| peptidyl-tRNA hydrolase [Eggerthella sp. YY7918]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG++Y+ TRHN GF+ +DA A G C A +G D ++LAKP
Sbjct: 2 FLIVGLGNPGEEYEHTRHNAGFDTVDAIAAEVGARYWKTECGALTAKGVFRDHDLVLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN- 137
Q++MN SG L Y + + +++ HD++ + G +R++ GGH GHNGL+S+ +
Sbjct: 62 QSFMNTSGGPVKQLMNAYGIDADHLIIIHDELDIDPGTIRVKFGGGHAGHNGLRSICDKL 121
Query: 138 -----FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR GIGRPPG+M ++L + A + A+ G + L+++GL ++
Sbjct: 122 GTRDWFRVRIGIGRPPGRMPVVDWVLSRPRKEAADDFTFAVDRGAQAALSLVNEGLEKTQ 181
Query: 190 RHFN 193
+ FN
Sbjct: 182 QAFN 185
>gi|225568649|ref|ZP_03777674.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
gi|225162577|gb|EEG75196.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
Length = 194
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+GTRHNVGF++ID A IS++ +A G+G + VLLAKP
Sbjct: 2 FIIAGLGNPTLQYEGTRHNVGFDVIDTVARKYNISVDYRKNRAYIGKGIIAGQKVLLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES L YYK+ +++LV +DD+ L G LR+R G GGHNG+KS+++
Sbjct: 62 QTYMNLSGESIRGLVDYYKVDEESQLLVIYDDVSLGAGQLRIRKKGSAGGHNGIKSIISC 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P + D ++L F+ RE ++ E ++++++ + +
Sbjct: 122 LGTDIFPRIKVGVGEKPKRYDLADYVLGHFSREEREMMEEGYGHAAEAVEMIVAGEIDAA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MNEYN 186
>gi|156741710|ref|YP_001431839.1| peptidyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
gi|189038162|sp|A7NK01.1|PTH_ROSCS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156233038|gb|ABU57821.1| Aminoacyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
Length = 214
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG+ Y TRHN+GF ++ A+ + KA +G + V LA P
Sbjct: 2 WLIVGLGNPGETYARTRHNIGFRVVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALALP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN- 136
QTYMNLSG++ L +YK+ P +LV +DD+ LP GVLRLR G G HNG++S++
Sbjct: 62 QTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIVAL 121
Query: 137 -------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
R GI RPP + ++L +F ++ + + L+L+L +G+ +
Sbjct: 122 LGSQVFPRLRIGIDRPPVAWNLADYVLARFTPEQEAQLPEVTRRAADALELVLREGIVVA 181
Query: 189 ARHFNT 194
N
Sbjct: 182 MNRINA 187
>gi|345018829|ref|YP_004821182.1| peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344034172|gb|AEM79898.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 184
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+GTRHN+GF +ID A+ G+++ + K+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGKEYEGTRHNIGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGE+ +YK+ L V+V +DD L G +R+R G GGHNG+KS++
Sbjct: 62 QTFMNSSGEALYDAVNFYKILLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSIIYLL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D + +L KF ++ ID A+ + + + ++ G+ +
Sbjct: 122 NSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 SKFN 183
>gi|317057761|ref|YP_004106228.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
gi|315450030|gb|ADU23594.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
Length = 208
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 10/192 (5%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 72
T ++ VGLGNPG +Y+GTRHN GF I+A + G S + KA G +G
Sbjct: 17 TGTKPEYIIVGLGNPGIQYEGTRHNAGFITIEALEKKLGFSCDRHKFKAKVGNTVIGGKS 76
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
L+ KP+T+MNLSG++ +YK+PL V+V DD+ L G +R+R G GGHNG+K
Sbjct: 77 CLVMKPETFMNLSGDAVSEAMDFYKIPLENVIVIFDDISLDVGHMRIRRKGSAGGHNGIK 136
Query: 133 SVM-----NNF----RGIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
S++ +F G+G+ P D ++L KF E++ A + + L+L++
Sbjct: 137 SIIAQCGGEDFPRIKLGVGKKPNPAYDLAKWVLSKFGDEDMEKLGNAADKACDALELMVQ 196
Query: 183 KGLTESARHFNT 194
+ E+ +N
Sbjct: 197 GKIDEAMNKYNA 208
>gi|354559302|ref|ZP_08978552.1| Peptidyl-tRNA hydrolase [Desulfitobacterium metallireducens DSM
15288]
gi|353542891|gb|EHC12351.1| Peptidyl-tRNA hydrolase [Desulfitobacterium metallireducens DSM
15288]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 100/190 (52%), Gaps = 16/190 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHNVGF ++D +AE + G+ V KP
Sbjct: 3 LIVGLGNPGGQYAETRHNVGFLLLDTWAEELKLDFRPKFQGLIAEMQLTGEK-VFFLKPL 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
T+MNLSG S +A +YK+ +LV HDDM LP G +RLR +G GGHNG+KS +
Sbjct: 62 TFMNLSGRSIREIAQFYKIASKDILVAHDDMDLPLGRIRLRQSGSAGGHNGIKSTIAEVG 121
Query: 138 ----FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+R G+GRPP DP ++L F ++ L+ G EVL+L + ES +
Sbjct: 122 TEEFWRLKIGVGRPPAGWDPANYVLGSFGKEELSSLEDVLERGQEVLRLWIQ---GESNK 178
Query: 191 HFNTIQKYKH 200
N KY H
Sbjct: 179 AMN---KYNH 185
>gi|404442255|ref|ZP_11007435.1| peptidyl-tRNA hydrolase [Mycobacterium vaccae ATCC 25954]
gi|403657201|gb|EJZ11982.1| peptidyl-tRNA hydrolase [Mycobacterium vaccae ATCC 25954]
Length = 192
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG Y TRHN+GF ++D A+ G VH K A G +
Sbjct: 1 MAEPVLVVGLGNPGPNYATTRHNIGFMVVDVLADRMGEKFK-VHKKSGAEVATGRLAGRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y + V+V HD++ + G +RL+ GG GHNGL+
Sbjct: 60 VVLAKPRVYMNESGRQVGPLAKFYSVAPAEVVVIHDELDIDFGRIRLKGGGGVAGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N+F GIGRPPGQ F+L+ FN++ R+ + T +++ + +LL++
Sbjct: 120 SVSSALGSNDFHRVRVGIGRPPGQKSGATFVLENFNSVERKEVPTIIEQAADATELLIAH 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|295104238|emb|CBL01782.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii SL3/3]
Length = 192
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 101/185 (54%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL GLGNP KY GTRHN GF +DA A+ IS+ + +GQG V V+L KP
Sbjct: 7 WLIAGLGNPEAKYDGTRHNAGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLKP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSG+S P+A ++K+P + VLV DD+ G LR+R +G GGHNGLKS++
Sbjct: 67 LTYMNLSGDSIAPMAGFFKIPADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIARL 126
Query: 136 --NNFR----GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF GIG +P D A++L KF + I + KL++ L +
Sbjct: 127 GGENFPRIRIGIGAKPHPDYDLAAWVLGKFPPEDAKAIADRYADLEAAAKLIMDGKLGLA 186
Query: 189 ARHFN 193
+N
Sbjct: 187 QSKYN 191
>gi|167036598|ref|YP_001664176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115025|ref|YP_004185184.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687682|sp|B0KBG1.1|PTH_THEP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166855432|gb|ABY93840.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928116|gb|ADV78801.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 184
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+GTRHNVGF +ID A+ G+++ + K+ G+G ++L KP
Sbjct: 2 YVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT++N SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 62 QTFVNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIYLL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P Q D + +L KF ++ ID A+ + + + ++ G+ +
Sbjct: 122 NSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEHAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 SKFN 183
>gi|160944869|ref|ZP_02092096.1| hypothetical protein FAEPRAM212_02385 [Faecalibacterium prausnitzii
M21/2]
gi|158444053|gb|EDP21057.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii M21/2]
Length = 206
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 101/185 (54%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL GLGNP KY GTRHN GF +DA A+ IS+ + +GQG V V+L KP
Sbjct: 21 WLIAGLGNPEAKYDGTRHNAGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLKP 80
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSG+S P+A ++K+P + VLV DD+ G LR+R +G GGHNGLKS++
Sbjct: 81 LTYMNLSGDSIAPMAGFFKIPADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIARL 140
Query: 136 --NNFR----GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF GIG +P D A++L KF + I + KL++ L +
Sbjct: 141 GGENFPRIRIGIGAKPHPDYDLAAWVLGKFPPEDAKAIADRYADLEAAAKLIMDGKLGLA 200
Query: 189 ARHFN 193
+N
Sbjct: 201 QSKYN 205
>gi|306820707|ref|ZP_07454335.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|402310282|ref|ZP_10829248.1| aminoacyl-tRNA hydrolase [Eubacterium sp. AS15]
gi|304551317|gb|EFM39280.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|400368734|gb|EJP21741.1| aminoacyl-tRNA hydrolase [Eubacterium sp. AS15]
Length = 187
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 101/185 (54%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ T+HNVGF +D +E I ++ + A G+G V+L KP
Sbjct: 2 YIIVGLGNPGTKYQNTKHNVGFMCLDLLSEKLNIKIDRIKFNALIGEGNYKGEKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
QT+MNLSG++ + +YK+ + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 62 QTFMNLSGQAVNQIMNFYKVERQNLFVLYDDIDIDIGKLRIRKKGSSGTHNGMKNIIYLL 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR G+ +PP MD +++L KF +++ L + V+ + + +S
Sbjct: 122 GYDDFPRFRIGVSKPPAYMDLASYVLSKFTDEEVKKLIPVLNDTVDACLYAIETDVDKSM 181
Query: 190 RHFNT 194
+N
Sbjct: 182 NKYNV 186
>gi|186684439|ref|YP_001867635.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
gi|238689436|sp|B2JA15.1|PTH_NOSP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186466891|gb|ACC82692.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
Length = 213
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 16/197 (8%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDA 71
A+ P L VGLGNP KY TRHN+GF ++A + S IS+ + +G+G G
Sbjct: 9 ALVIPQLIVGLGNPESKYDQTRHNIGFAAVEALSRSWRISLAENRKFQGEYGEGMAPGGG 68
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KP TYMN SG+S + ++YKLP VL+ +DDM LP G RLR +G GGHNG+
Sbjct: 69 KIRLLKPLTYMNRSGQSIQAVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSAGGHNGM 128
Query: 132 KSVM-----NNFR----GIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVEVL 177
KS + NF GIG+P G D + +L +F++ +++ LQ VE +
Sbjct: 129 KSAIAHLSTQNFPRLRIGIGKPKGAADNDDSNTVSHVLGRFSSAENQQMSLVLQFVVECI 188
Query: 178 KLLLSKGLTESARHFNT 194
+L L +G+ ++ N+
Sbjct: 189 ELSLKQGVEKAMNVCNS 205
>gi|337286885|ref|YP_004626358.1| peptidyl-tRNA hydrolase [Thermodesulfatator indicus DSM 15286]
gi|335359713|gb|AEH45394.1| peptidyl-tRNA hydrolase [Thermodesulfatator indicus DSM 15286]
Length = 189
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 13/184 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL+VGLGNPG +Y+ TRHN GF ++D A +G+ + + + L KP
Sbjct: 6 WLWVGLGNPGPRYRFTRHNFGFLVLDELASLKGLKFS----QGAYQSLVSAYKDAFLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGE+ P + K+ R+LV HDD+ LP G L+ GG GGH G+KSV++
Sbjct: 62 QTFMNLSGEAVAPWSRKLKISSERILVIHDDLDLPLGRLKFVPKGGAGGHRGVKSVIDAL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPP + + ++L F+ + L+ VE L LL L ++
Sbjct: 122 GTKEFPRLKLGIGRPPQGVTVREYVLSPFSESEIPLVKKVLERAVEALDYLLEHDLPKTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 STFN 185
>gi|410453264|ref|ZP_11307222.1| peptidyl-tRNA hydrolase [Bacillus bataviensis LMG 21833]
gi|409933387|gb|EKN70315.1| peptidyl-tRNA hydrolase [Bacillus bataviensis LMG 21833]
Length = 186
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG +Y+ TRHN+GFE+ID + I +N K +G G VLL KP T
Sbjct: 4 IVGLGNPGKQYEQTRHNIGFEVIDTLSNQFSIPLNQSKFKGLYGIGHYKGEKVLLLKPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGES + YY++ L ++V +DD+ LP G RLR G GGHNG+KS +
Sbjct: 64 YMNLSGESIRAVMDYYQIELEDLVVIYDDLDLPVGKTRLRQKGSPGGHNGIKSTVAHLGT 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
N R GI RP M ++L +F + + A++ + L K +
Sbjct: 124 QEFNRIRIGIDRPQAGMSVPDYVLGRFRPDEKPLTEEAVKRSADACSSWLEKPFLQVMNE 183
Query: 192 FN 193
+N
Sbjct: 184 YN 185
>gi|373471303|ref|ZP_09562360.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371760469|gb|EHO49153.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 202
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
++ L VGLGNPG +Y TRHN GF +++ A G + K F + +G+ +L
Sbjct: 11 SKMKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDITERKYKGLFAKARIGNEKAIL 70
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
+PQTYMN SGES Y+K+ V+V +DD+ L G LR+R G GGHNG+KS++
Sbjct: 71 LEPQTYMNNSGESVRAFMDYFKIEAKDVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSLI 130
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ G+G P +MD +L FNA ++++D A +E +KL++ G
Sbjct: 131 AHMGTSDFPRVKMGVGEKPARMDLADHVLGHFNAEDKKKLDEAASHAIEAIKLMVD-GQY 189
Query: 187 ESARHFNTIQKYK 199
++A + ++K K
Sbjct: 190 DTAMNKYNVKKTK 202
>gi|297745170|emb|CBI39162.3| unnamed protein product [Vitis vinifera]
Length = 92
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 63/79 (79%)
Query: 54 MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 113
M+ VH KA FGQGFVGD V LA P TYMNLSGES GPLAAYYKLPLNR++VFHDD LP
Sbjct: 1 MDIVHHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLPLNRMVVFHDDKSLP 60
Query: 114 CGVLRLRHNGGHGGHNGLK 132
CGVL L H GGHG HNG +
Sbjct: 61 CGVLCLHHKGGHGSHNGYE 79
>gi|441214878|ref|ZP_20976323.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis MKD8]
gi|440624998|gb|ELQ86851.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis MKD8]
Length = 191
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 115/195 (58%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG Y TRHN+GF + D A G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIG-SAFKVHKKSGAEVVTGRLAGTS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG GPLA +Y +P +++V HD++ + G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLR 119
Query: 133 SVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV + G+GRPPG+ DP AF+L+ F A R + T +++ + +LL+++
Sbjct: 120 SVASALGTKDFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELLIAQ 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|239988327|ref|ZP_04708991.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 11379]
Length = 197
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----DA 71
PWL VGLGNPG Y RHNVGF + D A G +A +G +G
Sbjct: 7 PWLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPASR 66
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNGL
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGALRLKLGGGDNGHNGL 126
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ + + + ++ LL++
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLAE 186
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 187 GLERAQSAYNS 197
>gi|375306204|ref|ZP_09771505.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Aloe-11]
gi|375081791|gb|EHS59998.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Aloe-11]
Length = 186
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y+ TRHNVGF +DA A I +N CKA G+G +G +L KP
Sbjct: 3 WI-VGLGNPGPQYEKTRHNVGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES YYK L ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGESLRAYMDYYKADLEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F ++ + +++ L+ L +
Sbjct: 122 GTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKDLLTGMIEDTCNALEYSLGHPFERTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AEFN 185
>gi|300857301|ref|YP_003782285.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
gi|300437416|gb|ADK17183.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
Length = 191
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 112/187 (59%), Gaps = 11/187 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G KY+ TRHN+GF+ +D + I +N K T+G+G + D V+L KP
Sbjct: 2 FLIVGLGNIGTKYQHTRHNIGFDAVDLISSKYNIPINREKFKGTYGEGIIADNKVMLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES A ++K+ + +++ +DD+ L G +R+R +G GGHNG+KSV+ N
Sbjct: 62 STYMNLSGESVIEAANFFKIKSSNIIIIYDDIDLEIGRIRIRKHGSAGGHNGIKSVIANL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+P G D + +L KF+ R I+ L+ +VL+ L++ G+ E+
Sbjct: 122 GTDVFPRIKVGIGQPKG--DLVSHVLGKFDINERNDIEKVLETSADVLECLINCGVEEAM 179
Query: 190 RHFNTIQ 196
FN ++
Sbjct: 180 NKFNGLK 186
>gi|443315580|ref|ZP_21045063.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 6406]
gi|442784815|gb|ELR94672.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 6406]
Length = 213
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 14/190 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLA 76
P L VGLGNPG+KY TRHN+GFE++D A +++ + + +G+G+ V L
Sbjct: 13 PRLVVGLGNPGEKYAKTRHNIGFEVVDTLAHRWQVALASQAKFQGIYGEGWAAGHKVGLL 72
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KPQTYMN SG+S + +YK+ VLV +DDM L G LRLR +G GGHNG+KS++
Sbjct: 73 KPQTYMNRSGQSVRAVLDWYKVEPEAVLVIYDDMDLATGRLRLRLSGSAGGHNGMKSLIA 132
Query: 137 NF---------RGIGR----PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
+ GIGR PG A +L + +A R ++ + +V+++ L +
Sbjct: 133 HLGGQDFPRLRLGIGRTATGEPGDRAVVAHVLGRPSAAERAHMEEVVTLAADVVEMALRE 192
Query: 184 GLTESARHFN 193
G+ ++ FN
Sbjct: 193 GVEKAMSRFN 202
>gi|407275963|ref|ZP_11104433.1| peptidyl-tRNA hydrolase [Rhodococcus sp. P14]
Length = 190
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 10/179 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG +Y+ TRHN+GF + D A G + A Q + V++AKP
Sbjct: 7 LVVGLGNPGPQYEKTRHNIGFMVADTLAARVGGKFSAHKRSNAEIVQARLDGRQVIIAKP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV---- 134
+T+MNLSG LA ++ + ++V HD++ L G +RL+ GG GHNGL+S+
Sbjct: 67 RTFMNLSGGPVAGLARFFSVEPADIVVVHDELDLDFGTVRLKLGGGENGHNGLRSISSAL 126
Query: 135 -----MNNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+ GIGRPPG+MDP ++L+ F++ R+ +D ++ + ++LLL GL ++
Sbjct: 127 GTKLYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLIREQAADAVELLLRVGLEDA 185
>gi|253576882|ref|ZP_04854207.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843749|gb|EES71772.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 186
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y+ TRHN+GF +D A GI + CKA G+G + V+L KP
Sbjct: 3 WI-VGLGNPGAQYEKTRHNIGFMAVDELARRHGIEIKQSKCKALIGEGMLPGGKVVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGE+ YYK + ++V +DD+ G RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGEAVRAYMDYYKASIEDMIVVYDDLDTELGRNRLRYQGSAGGHNGIKSIIQHI 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F + +D ++Q + L+ L ++
Sbjct: 122 GTQTFNRIRMGISRPEPGYAVVDYVLSPFPKKDKPLLDQSIQAACDALEYSLDHTFEQTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|302876605|ref|YP_003845238.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|307687279|ref|ZP_07629725.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|302579462|gb|ADL53474.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
Length = 188
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 11/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGN G +Y+ TRHNVGFE++D A+ I +N V K G+GF+ + V+L KP
Sbjct: 2 FVIFGLGNIGKEYESTRHNVGFEVVDILADKYNIQVNRVKFKGEIGEGFINNEKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE + +YK+P ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 TTYMNLSGECVREVMDFYKIPKENLIVIYDDISLDVGKLRIRQKGSAGGHNGIKNILLHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P G + +L +F +E ++ + + +L+ G+ ++
Sbjct: 122 GNDVFPRVKVGVGAPKGNL--INHVLGRFQKEEQETMNKVYDVAAQGVLDILNLGVLDAM 179
Query: 190 RHFNTI 195
+N I
Sbjct: 180 NKYNGI 185
>gi|389580922|ref|ZP_10170949.1| peptidyl-tRNA hydrolase [Desulfobacter postgatei 2ac9]
gi|389402557|gb|EIM64779.1| peptidyl-tRNA hydrolase [Desulfobacter postgatei 2ac9]
Length = 192
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG++Y TRHN+GF+++DA A+ G +N A + +G + L KP
Sbjct: 7 LLAGLGNPGEQYSRTRHNIGFDVVDALADRSGCRLNKEKFNAAYTGVRMGLQEIFLVKPL 66
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
+YMN SG LA Y+K+ + ++V HDDM LP G +++ GHGGHNG++S+++ F
Sbjct: 67 SYMNRSGIPLQKLADYFKIDIENIIVVHDDMDLPFGKIKIVQGRGHGGHNGIRSIIDAFG 126
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP +L K+ + +D L + + +L KG+ ++
Sbjct: 127 QKACVRVRVGIGRPESDRSVTGHVLGKYTPDEQACLDHVLNDACDACLAILEKGVVKAMN 186
Query: 191 HFNT 194
N+
Sbjct: 187 FVNS 190
>gi|379734255|ref|YP_005327760.1| peptidyl-tRNA hydrolase [Blastococcus saxobsidens DD2]
gi|378782061|emb|CCG01718.1| peptidyl-tRNA hydrolase [Blastococcus saxobsidens DD2]
Length = 195
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPVL 74
P+L VGLGNPG Y G RHNVG ++D A GI+ +A G+G + V+
Sbjct: 5 PYLVVGLGNPGPGYAGNRHNVGAMVLDELARRAGITPAPGKGARARAVAGEGRLAGRRVV 64
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LA+P TYMN SG L YYKLP ++++V HD++ +P G +RL+ GG GGHNGL+S+
Sbjct: 65 LAQPLTYMNESGSPVRGLLDYYKLPADQLVVLHDELDIPFGSVRLKRGGGEGGHNGLRSI 124
Query: 135 MNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+ DP F+L+ F+A R+ +D L E + ++ LL+ GL
Sbjct: 125 TRSAGTKEYLRVRVGIGRPPGRQDPADFVLKDFSATERKELDLLLVEAADAVEELLTLGL 184
Query: 186 TES 188
+
Sbjct: 185 EAA 187
>gi|255325404|ref|ZP_05366508.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
gi|255297490|gb|EET76803.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
Length = 197
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 12/169 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVLL 75
P L VGLGNPG KY GTRHN+GF++ D A + +S +VH K +G G ++
Sbjct: 24 PLLVVGLGNPGPKYAGTRHNIGFDVADELA-GELMSGFSVHKKTNTEVAEGMAGGRKIIC 82
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP+++MNLSG LA Y+ L ++V HD++ L G ++LR GG GHNGL+S
Sbjct: 83 AKPRSFMNLSGGPIKALAQYFHLSAADIIVVHDELELDFGTIKLRQGGGDHGHNGLRSTT 142
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
+ GIGRPPG+MDP +F+L+ + + I + VE
Sbjct: 143 KSLGTKDYQRLSVGIGRPPGRMDPASFVLKPWAKQEKAEIPILCADAVE 191
>gi|408794222|ref|ZP_11205827.1| aminoacyl-tRNA hydrolase [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408461457|gb|EKJ85187.1| aminoacyl-tRNA hydrolase [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 188
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 11/166 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPGDKYK TRHN+GF ++DA A S G+S GD V L KP
Sbjct: 4 FLIVGLGNPGDKYKNTRHNIGFMILDALASSFGVSFKDSKKYMETTHSLEGDK-VHLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
+MNLSG++T LA YK+P +R+LV D++ LP G ++ + GG GHNGLK ++
Sbjct: 63 LEFMNLSGKATQTLANLYKIPPSRILVIQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAKL 122
Query: 136 --NNFR----GIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGV 174
+F G+G+P G M+ F+LQ FN+ + +D ++E V
Sbjct: 123 GSQDFHRLRFGVGKPEKGGMEVADFVLQNFNSEEKNSLDALIKESV 168
>gi|363422862|ref|ZP_09310935.1| peptidyl-tRNA hydrolase [Rhodococcus pyridinivorans AK37]
gi|359732579|gb|EHK81592.1| peptidyl-tRNA hydrolase [Rhodococcus pyridinivorans AK37]
Length = 190
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG KY+ TRHN+GF + D A G + A Q + V++AKP
Sbjct: 7 LVVGLGNPGPKYENTRHNIGFMVADVLAGRVGGKFSAHKRSNADIVQARLDGRQVIIAKP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+TYMNLSG LA ++ + + V+V HD++ L G +RL+ GG GHNGL+S +
Sbjct: 67 RTYMNLSGGPVASLAKFFSVDPSNVIVLHDELDLDFGTIRLKLGGGENGHNGLRSTSSAL 126
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GIGRPPG+ DP F+L+ F+A R+ +D +EG + +
Sbjct: 127 GTKDYLRVRMGIGRPPGRQDPADFVLKPFSATERKELDVWCEEGADAV 174
>gi|390457080|ref|ZP_10242608.1| peptidyl-tRNA hydrolase [Paenibacillus peoriae KCTC 3763]
Length = 186
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y+ TRHNVGF +DA A I +N CKA G+G +G +L KP
Sbjct: 3 WI-VGLGNPGPQYEKTRHNVGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES YYK L ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGESLRAYMDYYKADLEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F ++ + +++ L+ L +
Sbjct: 122 GTQSFNRIRMGISRPEPGYAIVDYVLGTFPRKEKDLLIGMIEDTCSALEYSLGHPFERTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AEFN 185
>gi|313112803|ref|ZP_07798450.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624873|gb|EFQ08181.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 192
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 103/185 (55%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL GLGNP KY GTRHN G+ +D A+ GIS++ + +GQG V V+L KP
Sbjct: 7 WLIAGLGNPETKYDGTRHNAGYAALDYLADKWGISVSKTKFEGLWGQGEVDGHKVVLLKP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSG+S P A ++K+P + V+V DD+ G LR+R +G GGHNGLKS++
Sbjct: 67 LTYMNLSGDSIAPTAGFFKIPADHVIVLCDDITQSPGKLRIRPSGSAGGHNGLKSIIARL 126
Query: 136 --NNFR----GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF G+G +P D A++L KF A + + + KL++ L+ +
Sbjct: 127 GGENFPRIRIGVGAKPHPDYDLAAWVLGKFPAEDAKALSGRYPDLEAAAKLIMDGKLSLA 186
Query: 189 ARHFN 193
+N
Sbjct: 187 QSKYN 191
>gi|428781502|ref|YP_007173288.1| peptidyl-tRNA hydrolase [Dactylococcopsis salina PCC 8305]
gi|428695781|gb|AFZ51931.1| peptidyl-tRNA hydrolase [Dactylococcopsis salina PCC 8305]
Length = 190
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 11/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGD-APVLLAK 77
L VGLGNPGDKY TRHN+GFE++DA A+ G+ K + +GFV + + L K
Sbjct: 6 LIVGLGNPGDKYDKTRHNIGFEVVDAIAKDWGLEWRENNRFKGNYSEGFVPNLGKIRLLK 65
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMN SG++ + +YK+ VL+ +DD+ LP G LRLR +G GGHNG+KS++ +
Sbjct: 66 PTTYMNHSGQAVRSVCDWYKIAPESVLIIYDDLDLPVGKLRLRLSGSAGGHNGIKSIIAH 125
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GI + D + +L KF+ + I AL +VL+ +LS G ++
Sbjct: 126 LGTQQFPRLRIGIKKTDTVKDTISHVLGKFSPDEQPYIKEALAIAPKVLETVLSDGFEKA 185
Query: 189 ARHFN 193
+N
Sbjct: 186 MNLYN 190
>gi|218441393|ref|YP_002379722.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
gi|218174121|gb|ACK72854.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
Length = 210
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 30/214 (14%)
Query: 7 LRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQG 66
+ +G T ++ P L +GLGNP +KY+ TRHN+GFE +D A+ +S F QG
Sbjct: 1 MTKGNLTDLSIPQLIIGLGNPEEKYEKTRHNIGFEAVDLLAKMWQLSW---QQNKRF-QG 56
Query: 67 FV--GDAP----VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
F G P + L KP TYMN SGES + +YKLP+ +LV +DDM LP G +RLR
Sbjct: 57 FFTEGTGPNHQKIRLLKPLTYMNRSGESVRAVIDWYKLPVESILVIYDDMDLPLGRIRLR 116
Query: 121 HNGGHGGHNGLKSVMN-----NF----RGIGRPPGQMDPKAFLLQKFNA----------- 160
+G GGHNG+KS+++ NF GIG+ + + + +L +F+A
Sbjct: 117 LSGSAGGHNGIKSIISHVGGQNFPRLRIGIGKSNQKKETISHVLGRFSADENQIMSEVLQ 176
Query: 161 IARERIDTALQEGVEVLKLLLSKGLTESARHFNT 194
+ E T+L+EGVE L + + ES+ NT
Sbjct: 177 LVEEATKTSLKEGVEKAMSLYNNRVIESSIFENT 210
>gi|408501196|ref|YP_006865115.1| peptidyl-tRNA hydrolase [Bifidobacterium asteroides PRL2011]
gi|408466020|gb|AFU71549.1| peptidyl-tRNA hydrolase [Bifidobacterium asteroides PRL2011]
Length = 199
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVL 74
WL GLGNPGD+YKGTRHN+GF D AE +++ A G+G + P
Sbjct: 6 WLIAGLGNPGDEYKGTRHNMGFMCADLLAERWSVNLRDHKGLAQLGRGTLDLEGRRIPFF 65
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAKP T+MN SG++ + +YY +P+ RV+V HDDM L G ++++ G GGHNG++S+
Sbjct: 66 LAKPLTFMNDSGDALASICSYYHIPVGRVVVIHDDMDLEFGRIKVKAGGSSGGHNGIRSI 125
Query: 135 MNNF---------RGIGR----PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
+ G+G P ++L F R+R+ L +G + ++++
Sbjct: 126 DRSLGSNAYARVRMGVGHARRGPDAHRRTVDWVLGTFVGDQRKRLPEFLADGADAAEIVI 185
Query: 182 SKGLTESARHFN 193
+KGL+++ FN
Sbjct: 186 TKGLSQAQELFN 197
>gi|428210015|ref|YP_007094368.1| peptidyl-tRNA hydrolase [Chroococcidiopsis thermalis PCC 7203]
gi|428011936|gb|AFY90499.1| peptidyl-tRNA hydrolase [Chroococcidiopsis thermalis PCC 7203]
Length = 225
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 105/191 (54%), Gaps = 15/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLA 76
P L VGLGNP KY TRHN+GF +DA A + I + + + FG+G + L
Sbjct: 18 PQLIVGLGNPEPKYDQTRHNIGFAAVDAIARAWQIPLADNRKFQGIFGEGRSNAGKIRLL 77
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM- 135
KP TYMN SG++ + +YKLP VL +DDM LP G +RLR +G GGHNG+KS +
Sbjct: 78 KPLTYMNNSGQAIRAVTDWYKLPPESVLAIYDDMDLPLGKIRLRLSGSAGGHNGMKSAIA 137
Query: 136 ----NNFR----GIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
NF GIGRP G + +++L +F++ + LQ +E ++L L
Sbjct: 138 HLGTQNFPRLRIGIGRPQGNNTKEDASTISYVLGRFSSDQTPLVAEVLQMALEAVELSLK 197
Query: 183 KGLTESARHFN 193
+G+ ++ +N
Sbjct: 198 QGVAQAMNRYN 208
>gi|339626511|ref|YP_004718154.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus TPY]
gi|379005968|ref|YP_005255419.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus DSM 10332]
gi|339284300|gb|AEJ38411.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus TPY]
gi|361052230|gb|AEW03747.1| Peptidyl-tRNA hydrolase [Sulfobacillus acidophilus DSM 10332]
Length = 182
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 16/184 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV-LLAKP 78
L VGLGNPG Y TRHNVGF ++DA+A +G+ G++ D+ L KP
Sbjct: 4 LIVGLGNPGPDYVNTRHNVGFMVLDAYARHRGLRFRLGRY------GYLADSDQGWLMKP 57
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSG++ GP Y+L ++VLV HDD+ LP G +R+R +G GGHNG+KS++
Sbjct: 58 MTFMNLSGDAVGPFVRRYRLTPDQVLVVHDDLDLPLGRIRIRAHGSSGGHNGIKSIIQAL 117
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GI RPP M ++L F+A R + + VE L + +GL +
Sbjct: 118 GTDRFPRMRLGISRPPASMPVIDWVLAPFSADERRVLQDTIARAVEALDGIGQEGLEWAM 177
Query: 190 RHFN 193
+N
Sbjct: 178 SRYN 181
>gi|332798113|ref|YP_004459612.1| peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|438001016|ref|YP_007270759.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|332695848|gb|AEE90305.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|432177810|emb|CCP24783.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
Length = 189
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG +Y+ TRHNVGF +D AE + +N V K G+ +LL KP
Sbjct: 2 FLIAGLGNPGKEYENTRHNVGFMTLDVIAEKLDVKINKVKFKGLLGETVYNKEKILLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSG+S +YK+ L +++V +DDM LP G LR++ GG GGH G+ S++
Sbjct: 62 LTFMNLSGQSVADALNFYKISLEQLIVIYDDMDLPVGRLRIKPEGGSGGHRGMDSIIYQL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKF 158
GIGRP Q DP +L +F
Sbjct: 122 ASDKICRIRIGIGRPDEQKDPVGHVLGRF 150
>gi|421077189|ref|ZP_15538160.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans JBW45]
gi|392524577|gb|EIW47732.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans JBW45]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GF ++D A+ GI +A + + G+ +LL KPQ
Sbjct: 3 IVVGLGNPGQQYSATRHNIGFMVVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + G LA +YK+P+ +++ DDM LP G LRLR GG GGH G++S++ +
Sbjct: 62 TYMNLSGVAVGELARWYKVPVEDIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHLS 121
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPP ++L F A + + A+++ + + +L +G+ ++
Sbjct: 122 KDSFPRVRVGIGRPPAGWQVVDYVLSSFTAEEKSLLKAAIEKAADATESILEQGMNKA 179
>gi|365133371|ref|ZP_09342706.1| peptidyl-tRNA hydrolase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363615647|gb|EHL67106.1| peptidyl-tRNA hydrolase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 195
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+GTRHN GF +D AE G+ + A G G VLL KPQ
Sbjct: 12 IIVGLGNPGKKYEGTRHNAGFAALDHVAEKWGVRVTKAKFDALTGTGTAAGVKVLLMKPQ 71
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSG++ A +YK+P R++V DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 72 TFMNLSGDAVRKAADFYKVPPERIIVLFDDISLAPGRLRIRKTGSAGGHNGIKSIIGNIG 131
Query: 140 --------GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G +P + D ++L + ++ ++ + L+L++ +
Sbjct: 132 QDFPRVKIGVGEKPRPEYDLADWVLSRLTQAEKKAVEARYDDICGALELMMKGQFDTAMS 191
Query: 191 HFN 193
+N
Sbjct: 192 RYN 194
>gi|94264422|ref|ZP_01288212.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93455179|gb|EAT05397.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKP 78
L GLGNPG KY+ TRHN+GF ID A GIS+ +A G+G + PV+L KP
Sbjct: 3 LVAGLGNPGAKYEDTRHNIGFLFIDHLARRHGISLKEESKWEAASGRGTLWGQPVMLVKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN- 137
TYMNLSG + G LA +Y++ V VFHD++ LP G R+ G GGHNG++S++++
Sbjct: 63 LTYMNLSGRAVGRLARFYRIEAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLIDHL 122
Query: 138 -------FR-GIGRPPGQMDPKAFLLQKFNAIARERI 166
FR G+GRPP Q ++L F+ R+ +
Sbjct: 123 GSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPAERQAL 159
>gi|345000160|ref|YP_004803014.1| peptidyl-tRNA hydrolase [Streptomyces sp. SirexAA-E]
gi|344315786|gb|AEN10474.1| peptidyl-tRNA hydrolase [Streptomyces sp. SirexAA-E]
Length = 197
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----DA 71
PWL VGLGNPG +Y RHNVGF + D A G +A +G VG
Sbjct: 7 PWLIVGLGNPGPEYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRVGPPGPLSR 66
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNGL
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDIDYGTLRLKLGGGDNGHNGL 126
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ + + + ++ L+++
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELGYLVDRAADAVEALVAE 186
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 187 GLERAQSAYNS 197
>gi|400537666|ref|ZP_10801188.1| peptidyl-tRNA hydrolase [Mycobacterium colombiense CECT 3035]
gi|400328710|gb|EJO86221.1| peptidyl-tRNA hydrolase [Mycobacterium colombiense CECT 3035]
Length = 191
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 108/182 (59%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPGD Y TRHNVGF + D A+ G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNVGFMVADLLAQRMG-SKFKAHKRSGAEIVSGRLAGHS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV N +F+ GIGRPPG+ DP AF+L+ F+A R + T ++ + +LL+
Sbjct: 120 SVANALGSKDFQRVRIGIGRPPGRKDPAAFVLEAFSAAERPEVPTICEQAADATELLIEL 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|347524854|ref|YP_004831602.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 27782]
gi|345283813|gb|AEN77666.1| Peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 27782]
Length = 187
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGN G +Y TRHN GF ID FAE N A G + V+LAKP
Sbjct: 3 LIVGLGNIGKEYDETRHNAGFMTIDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG S + +YKL VL+ HDDM L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNESGRSVRQIVDFYKLDPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
F+ GI P Q ++L +F++ R D + E V+ + L
Sbjct: 123 TEKFKRLRIGIDHPAKQK-VVDWVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|345851996|ref|ZP_08804953.1| peptidyl-tRNA hydrolase [Streptomyces zinciresistens K42]
gi|345636548|gb|EGX58098.1| peptidyl-tRNA hydrolase [Streptomyces zinciresistens K42]
Length = 200
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T + PWL GLGNPG +Y RHNVGF + D AE G +A +G +G
Sbjct: 4 TTDPSAPWLIAGLGNPGPEYARNRHNVGFMVADLLAERIGGKFKRAGKAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V+L KP YMNLSG L +YK+PL V+ HD++ + G LRL+ GG
Sbjct: 64 PGPLNRRVVLVKPMAYMNLSGGPLNALRDFYKVPLEHVVAVHDELDIEYGTLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ GIGRPPG+M F+L+ F+ R+ +D + + +
Sbjct: 124 NGHNGLKSMTKVMGADYHRVRFGIGRPPGRMQVADFVLRDFSVAERKELDYFVDRAADGV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 ESLVIEGLERAQSTYNS 200
>gi|169335435|ref|ZP_02862628.1| hypothetical protein ANASTE_01849 [Anaerofustis stercorihominis DSM
17244]
gi|169258173|gb|EDS72139.1| aminoacyl-tRNA hydrolase [Anaerofustis stercorihominis DSM 17244]
Length = 186
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +Y TRHN+GFE +D ++ I +N KA +G+G + V L KP
Sbjct: 2 YLIVGLGNIGSEYNLTRHNIGFETVDYISDEYNIKINKTKFKADYGKGKLAGEEVFLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN- 137
+TYMNLSGES Y+K+P + V +DD+ LP G LR+R NGG G HNG+KS++
Sbjct: 62 RTYMNLSGESVKLFKDYFKIPEENIFVIYDDIELPKGKLRIRKNGGPGTHNGMKSIVKEI 121
Query: 138 -------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
FR G+G P D ++L +F+A I + + + L K L ++
Sbjct: 122 GTKNFPRFRMGVGSPE-HGDLVNYVLGRFSAEELPVIKDMVIMTSKAIFTALDKDLDKAM 180
Query: 190 RHFN 193
+N
Sbjct: 181 NMYN 184
>gi|296169882|ref|ZP_06851494.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895438|gb|EFG75140.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 191
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPGD Y TRHN+GF + D A G S VH + A G + P
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNLGFMVADLLAGRLG-SKFKVHKRSGAEVVSGRLAGHP 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
VL+AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VLVAKPRCYMNESGRQVGPLAKFYSVPPADIVVVHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 133 SVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV + GIGRPPG+ DP AF+L+ F+A R + T ++ + +LL+
Sbjct: 120 SVASALGTKEFQRVRIGIGRPPGRKDPAAFVLENFSAAERGDVPTICEQAADATELLVEL 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|307111354|gb|EFN59588.1| hypothetical protein CHLNCDRAFT_132968 [Chlorella variabilis]
Length = 301
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG ++ GTRHN G+ ++ A A ++++ A + + VLLAKP
Sbjct: 49 WLIVGLGNPGPQFAGTRHNAGWLVVAAVARLLDVAVDRFQANAEVARSRLAGKSVLLAKP 108
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T MNLSGE+ LA +Y +P RVLV +DD+ LP G +RLR GG GGH G+KSV
Sbjct: 109 LTTMNLSGEAVAGLADFYHIPPERVLVVYDDLDLPTGTVRLRPRGGPGGHGGMKSVAAHL 168
Query: 136 --NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+NF GIGRPP +LQ F R ++D A+Q+ V V++ +LS GL +
Sbjct: 169 QGDNFPRIRLGIGRPPAGTTVLDHVLQDFGEAERLQVDAAVQQAVGVIRAVLSVGLERA 227
>gi|384456479|ref|YP_005669077.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|418015483|ref|ZP_12655048.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|345505818|gb|EGX28112.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984825|dbj|BAK80501.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-Yit]
Length = 191
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query: 17 RPW----LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 72
R W L VGLGN G +Y TRHNVGF M+D E IS++ + + +G G +
Sbjct: 3 RSWSLMFLIVGLGNIGSRYNNTRHNVGFIMLDRICEDLNISLDNENDTSYYGTGIISGKN 62
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
++ KP+T+MNLSG + + Y+K+ ++ +LV +DD+ L +R++ G HGGHNG+K
Sbjct: 63 IMCMKPKTFMNLSGSAVLEIINYFKISIDDLLVIYDDIYLDVSKIRIKQRGSHGGHNGIK 122
Query: 133 SVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
++N GIG +D ++L KF +D+ ++ +++++
Sbjct: 123 DIINKINTDKFKRIKIGIGENK-NIDLSNYVLSKFTYDEMRMLDSKYEDISTCIRMIIEG 181
Query: 184 GLTESARHFN 193
L E+ FN
Sbjct: 182 KLVEAMNLFN 191
>gi|302551982|ref|ZP_07304324.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
gi|302469600|gb|EFL32693.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
Length = 200
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 14/197 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG- 69
T A PWL VGLGNPG +Y G RHNVGF + D A+ G +A +G +G
Sbjct: 4 TTDAAAPWLIVGLGNPGPEYAGNRHNVGFMVADLLADRVGGRFKRAGRAQAQVVEGRIGP 63
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
+ V++AKP +YMNLSG L +YK+P+ V+ HD++ + G LRL+ GG
Sbjct: 64 PGPLNRRVIVAKPMSYMNLSGGPVNTLREFYKVPVAHVVAVHDELDIDYGTLRLKLGGGD 123
Query: 126 GGHNGLKSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGLKS+ F GIGRPPG+M F+L+ F+++ R+ +D + + +
Sbjct: 124 NGHNGLKSMTKAFGSEYHRVRFGIGRPPGRMPVADFVLRDFSSVERKELDYFVDRAADAV 183
Query: 178 KLLLSKGLTESARHFNT 194
+ L+ +GL + +N+
Sbjct: 184 ECLVIEGLERAQSTYNS 200
>gi|326778824|ref|ZP_08238089.1| peptidyl-tRNA hydrolase [Streptomyces griseus XylebKG-1]
gi|326659157|gb|EGE44003.1| peptidyl-tRNA hydrolase [Streptomyces griseus XylebKG-1]
Length = 197
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----DA 71
PWL VGLGNPG Y RHNVGF + D A G +A +G +G
Sbjct: 7 PWLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRMGPPGPGSR 66
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G+LRL+ GG GHNGL
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGMLRLKLGGGDNGHNGL 126
Query: 132 KSVMNNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS+ GIGRPPG+M F+L+ F++ R+ + + + ++ LL++
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLAE 186
Query: 184 GLTESARHFNT 194
GL + +N+
Sbjct: 187 GLERAQSAYNS 197
>gi|153952804|ref|YP_001393569.1| peptidyl-tRNA hydrolase [Clostridium kluyveri DSM 555]
gi|219853469|ref|YP_002470591.1| hypothetical protein CKR_0126 [Clostridium kluyveri NBRC 12016]
gi|189038284|sp|A5N4J0.1|PTH_CLOK5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783863|sp|B9DY52.1|PTH_CLOK1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146345685|gb|EDK32221.1| Pth [Clostridium kluyveri DSM 555]
gi|219567193|dbj|BAH05177.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 187
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G KY TRHN+GF+ ID ++ I++N K +G+GF+G V+L KP
Sbjct: 2 FLIVGLGNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES +YK+ +R+++ +DD+ + G R+RH G GGHNG+K+++ N
Sbjct: 62 GTYMNLSGESVREAVNFYKIENDRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILNL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P +D +++L KF+ R I+ L+ VE L+ ++ G+ +
Sbjct: 122 GTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEVAM 179
Query: 190 RHFN 193
FN
Sbjct: 180 NKFN 183
>gi|332654762|ref|ZP_08420504.1| aminoacyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
gi|332516105|gb|EGJ45713.1| aminoacyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
Length = 197
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ V LGNPGD+Y+ TRHNVGF + D E + + + KA + VL+ KP
Sbjct: 12 WMLVCLGNPGDQYENTRHNVGFMVADQLGERYRLPIQKLKFKALTNVFTISGEKVLVMKP 71
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE+ P A +YK+P ++V DD L G LR+R +G GGHNGLKS++ +
Sbjct: 72 VTYMNLSGEAVRPAADFYKIPPEHIIVISDDTALDVGKLRIRKSGSAGGHNGLKSIIQHL 131
Query: 139 ---------RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G+ P D ++L KF R+ I A++ + ++ + +G +
Sbjct: 132 GTDQFPRIRVGVGKKPHPDYDLADWVLGKFQGEDRKAIAAAVERCADAVECYIKEGPDRA 191
Query: 189 ARHFN 193
FN
Sbjct: 192 MNKFN 196
>gi|348025512|ref|YP_004765316.1| peptidyl-tRNA hydrolase [Megasphaera elsdenii DSM 20460]
gi|341821565|emb|CCC72489.1| peptidyl-tRNA hydrolase [Megasphaera elsdenii DSM 20460]
Length = 189
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ ++HN GF ++D A+ +++ A Q V ++L KPQ
Sbjct: 3 MIVGLGNPGRQYEESKHNTGFRVVDELAKRWNVTLWQDKMDALVAQTTVNGEKIILVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + GPL +YK+ V V +DDM L G LR+R NG GGHNG+KS+ N
Sbjct: 63 TYMNESGRAVGPLMRWYKIDQPDVYVAYDDMDLAVGRLRIRKNGSDGGHNGIKSLFANGC 122
Query: 138 -----FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
FR GIGRP D +L F RE +++ ++ LS G+ +
Sbjct: 123 TDFTRFRVGIGRPLPHHDVVDHVLTPFPEELREAYQQGIEDAATAIEGCLSLGVDKGMNR 182
Query: 192 FNTIQK 197
+N +K
Sbjct: 183 YNPKKK 188
>gi|347751667|ref|YP_004859232.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
gi|347584185|gb|AEP00452.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
Length = 185
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 96/172 (55%), Gaps = 9/172 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG +Y+ TRHN+GFE+++ AE K + V VLL KP T
Sbjct: 4 IVGLGNPGAQYEHTRHNIGFEVVNLLAERLQAPFKQSKFKGLCAETTVNSGKVLLLKPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGES + YY+L +LV +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 YMNLSGESVKAVMDYYRLGTGDLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIHHLGT 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
N R GIGRP ++L +F+ RE++ A+++G + + L K
Sbjct: 124 QEFNRIRIGIGRPDRDAYMPDYVLGRFSKEDREKMQLAVEKGADACEAWLEK 175
>gi|282898618|ref|ZP_06306606.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
gi|281196486|gb|EFA71395.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
Length = 210
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGF-VGDAPVLL 75
P L VGLGNP KY TRHN+GF IDA + + I++ + FG+G +G + +
Sbjct: 13 PQLIVGLGNPEPKYDQTRHNIGFAAIDAISRNWHIAVTENRKFQGQFGEGLALGSKKIRI 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SGES + ++YKLP VLV +DDM LP G +RLR +G GGHNG+KS +
Sbjct: 73 LKPLTYMNRSGESIQAVTSWYKLPPESVLVIYDDMDLPLGKIRLRLSGSAGGHNGMKSTI 132
Query: 136 NNFR---------GIGRPPG-----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
++ GIG+P D + +L KF+ + ID L VE ++L L
Sbjct: 133 SHLNSQNFPRLRIGIGKPKNLPNNDDGDTVSHVLGKFSPQEAKLIDPILAFVVECVELTL 192
Query: 182 SKGLTESARHFNT 194
+G+ ++ N+
Sbjct: 193 KQGVEKAMNRCNS 205
>gi|169824177|ref|YP_001691788.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
gi|238687728|sp|B0S0D9.1|PTH_FINM2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167830982|dbj|BAG07898.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
Length = 189
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+GD V+L KP
Sbjct: 2 YLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGDEKVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 62 STYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLI 121
Query: 136 --NNFRGIGRPPGQMDP---KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F I GQ D K F+L +F+ E ++ + + ++ + + +
Sbjct: 122 ESQDFARIKVSVGQNDKYDLKDFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDYAMN 181
Query: 191 HFN 193
+FN
Sbjct: 182 NFN 184
>gi|68536581|ref|YP_251286.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|68264180|emb|CAI37668.1| pthA [Corynebacterium jeikeium K411]
Length = 209
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 25/175 (14%)
Query: 7 LRRGFCTAVARP----------WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQ--GISM 54
L RG T VA P WL VGLGNPGDKY TRHNVG +I + Q S+
Sbjct: 10 LERGLET-VASPNKKQHTNSDTWLIVGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASL 68
Query: 55 NTVHCKAT--FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGL 112
NT H K + + V+LA+P+T+MN+SG LAA++K+P ++V +DD+
Sbjct: 69 NT-HKKTNTDIAEVKIAGRKVVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEG 127
Query: 113 PCGVLRLRHNGGHGGHNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKF 158
G ++LR +GG GHNGLKS+ + GIGRPPG+MDP A++L+ F
Sbjct: 128 DPGAVKLRQSGGDKGHNGLKSITKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPF 182
>gi|134097415|ref|YP_001103076.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|291004595|ref|ZP_06562568.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|133910038|emb|CAM00150.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
Length = 191
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+G RHN+GF + D A G A +G +G +LAKP+
Sbjct: 9 LIVGLGNPGPRYEGNRHNIGFLVADELAARVGGKFKAHKSGAEIVEGRLGGVRAVLAKPR 68
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
++MNLSG A +YK+ ++V HD++ LP G +RL+ GG GHNGL+S+ +
Sbjct: 69 SFMNLSGGPVAGAAKFYKVQPGSLIVIHDELDLPYGTVRLKRGGGENGHNGLRSISKSLG 128
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RPPG+MDP ++L+ F+ R+ + + + ++ L +GL +
Sbjct: 129 TKDYLRVRFGIDRPPGRMDPADYVLKDFSGAERKELAYFVDLCADAVESLAKEGLEAAQN 188
Query: 191 HFN 193
F+
Sbjct: 189 RFH 191
>gi|317490360|ref|ZP_07948844.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325833603|ref|ZP_08166052.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
gi|316910495|gb|EFV32120.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325485527|gb|EGC87996.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
Length = 185
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG++Y+ TRHN GF+ +D AE G C A +G D ++LAKPQ
Sbjct: 3 LIVGLGNPGEEYEHTRHNAGFDAVDLIAEEVGARYWKTECGALTTKGVYRDHDLVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
+YMN SG L Y + ++V HD++ + G +R++ GGH GHNGL+S+ +
Sbjct: 63 SYMNTSGGPVKQLMNAYGVDAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRSICDKLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+M ++L K A + A G + L+ GL ++ +
Sbjct: 123 TRDWHRVRVGIGRPPGRMPVVDWVLSKPKKDAADDFAQATDRGAQAALSLVQVGLEKTQQ 182
Query: 191 HFN 193
FN
Sbjct: 183 AFN 185
>gi|335046927|ref|ZP_08539950.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333760713|gb|EGL38270.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 208
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 14/187 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAE---SQGISMNTVHCKATFGQGFVGDAPVLL 75
WL GLGNP KY GTRHN GF +IDA E +G+ H F + +G V++
Sbjct: 21 WLIAGLGNPEKKYNGTRHNAGFAVIDALLEMLGGKGLESTKFH--GAFTKLRIGTEEVVI 78
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSG+S P+A +YK+P +VLV D++ L G +R+R G GGHNGLKS++
Sbjct: 79 LKPLTYMNLSGDSIAPMANFYKIPAEQVLVVSDEISLSPGSIRIRKKGSAGGHNGLKSII 138
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
G+G + D A +L F +R++ A + + +++G+
Sbjct: 139 ARLGTEDFPRIRLGVGEKREREDLAAHVLGHFEKEDEKRMEEAYTDAAKACICTVTEGIE 198
Query: 187 ESARHFN 193
++ +N
Sbjct: 199 KAMNLYN 205
>gi|323340105|ref|ZP_08080370.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|417974648|ref|ZP_12615455.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|323092482|gb|EFZ35089.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|346328992|gb|EGX97304.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
Length = 187
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGN G +Y TRHN GF ID FAE N A G + V+LAKP
Sbjct: 3 LIVGLGNIGKEYDETRHNAGFMTIDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG S + +YKL VL+ HDDM L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNESGRSVRQIVDFYKLNPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
F+ GI P Q ++L +F++ R D + E V+ + L
Sbjct: 123 TEKFKRLRIGIDHPAKQK-VVDWVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|297562916|ref|YP_003681890.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847364|gb|ADH69384.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 221
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 115/185 (62%), Gaps = 11/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG KY G RHN GF +++A A + + H + + + PV+LAKP
Sbjct: 37 WLVVGLGNPGPKYAGNRHNAGFLVVEALAGGERWKAHKAHAEVV--ETRLDGVPVVLAKP 94
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+++MNLSG LA +YK+P+ R++V HD+M + G L+L+ GG GGHNGLKS+ ++
Sbjct: 95 RSFMNLSGGPVSGLARFYKVPVERIVVVHDEMDIDFGALKLKKGGGPGGHNGLKSMTSSL 154
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+GRPPG+MDP A++L+ F++ R +D ++ + ++ +L++GL +
Sbjct: 155 SSPDYIRVRFGVGRPPGRMDPAAYVLKDFSSTERAELDLNVERAADAVRTVLTEGLGRAQ 214
Query: 190 RHFNT 194
++T
Sbjct: 215 NIYHT 219
>gi|354613091|ref|ZP_09031024.1| Peptidyl-tRNA hydrolase [Saccharomonospora paurometabolica YIM
90007]
gi|353222563|gb|EHB86867.1| Peptidyl-tRNA hydrolase [Saccharomonospora paurometabolica YIM
90007]
Length = 198
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y RHN+GF ++D A+ G S A +G + D V+LAKP+
Sbjct: 16 LLAGLGNPGPRYAANRHNIGFLVLDELADRLGGSFKAHKGGAEVLEGRLADRGVVLAKPR 75
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
+YMNLSG A +Y + ++ V+V HD++ L G ++L+ GG GHNGL+S+ +
Sbjct: 76 SYMNLSGGPVAGTARFYSIAVDGVVVIHDELDLDFGAVKLKFGGGDNGHNGLRSITKSLG 135
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+GRPPG+M P ++L+ F+ + R+ + + + + L+ GL +
Sbjct: 136 TRDYYRVRFGVGRPPGRMSPADYVLKDFSTVERKDLAVHIDRCADAVTELVRSGLAAAQN 195
Query: 191 HFN 193
F+
Sbjct: 196 AFH 198
>gi|342215333|ref|ZP_08707980.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586223|gb|EGS29623.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 193
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ TRHNVGF +ID +++ I +N CK +GQG + L KPQ
Sbjct: 3 VIVGLGNPGKQYENTRHNVGFNVIDLLSQTLSIPVNKAKCKGLYGQGTRNGEKIFLLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGES Y+ +P+ VLV DD+ + ++++ G G HNGLKS++
Sbjct: 63 TYMNNSGESVQEFIRYFNIPIQDVLVLVDDIDIDFTEIKIKAKGSAGTHNGLKSIIAMTG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F G+G+ + + F+L +F +E ++ L E +L G++
Sbjct: 123 SQDFPRLKIGVGKKHPEENLANFVLGRFPRDQQEEMEQCLDRAAEAAIAILDHGVSYGMN 182
Query: 191 HFN 193
HFN
Sbjct: 183 HFN 185
>gi|311740786|ref|ZP_07714613.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304306|gb|EFQ80382.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 197
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 96/169 (56%), Gaps = 12/169 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVLL 75
P L VGLGNPG KY GTRHN+GF++ D A + +S +VH K +G G ++
Sbjct: 24 PLLVVGLGNPGPKYAGTRHNIGFDVADELA-GEIMSSFSVHKKTNTEVAEGMAGGRKIIC 82
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP+++MNLSG L+ Y+ L ++V HD++ L G ++LR GG GHNGL+S
Sbjct: 83 AKPRSFMNLSGGPIKALSQYFHLSPTDIIVVHDELELDFGTVKLRKGGGDHGHNGLRSTT 142
Query: 136 NNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
+ GIGRPPG+MDP +F+L+ + + I + VE
Sbjct: 143 KSLGTKDYQRLSIGIGRPPGRMDPASFVLKPWAKQEKAEIPILCADAVE 191
>gi|225016416|ref|ZP_03705608.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
gi|224950801|gb|EEG32010.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
Length = 209
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
L + ++ T +L VGLGNPG +Y+ TRHN GF +D AE G ++ + K+
Sbjct: 7 LFKQIRQQDDATKAPIEYLIVGLGNPGKEYEFTRHNAGFLALDQLAEKSGAAVKKIKFKS 66
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
G+ VG LL KP TYMN SGE+ +YK+P+ VLV +DD+ L G LR+R
Sbjct: 67 LTGEAVVGSRRCLLMKPSTYMNNSGEAVVEAMNFYKIPIENVLVLYDDISLEPGKLRIRR 126
Query: 122 NGGHGGHNGLKSVM-----NNF----RGIGRPPG-QMDPKAFLLQKFNAIARERIDTALQ 171
G GGHNG+KS++ + F G+G+ P + D ++L F+ E ++ A
Sbjct: 127 KGSDGGHNGIKSIIYLTGKDTFPRIKLGVGKKPDPRYDLAKWVLSAFSKEEFEAMEQAFS 186
Query: 172 EGVEVLKLLLSKGLTESARHFNT 194
E L++ + ++ +N
Sbjct: 187 NAGEAAALIVDGKIDQAMNLYNA 209
>gi|153811641|ref|ZP_01964309.1| hypothetical protein RUMOBE_02033 [Ruminococcus obeum ATCC 29174]
gi|149832382|gb|EDM87467.1| aminoacyl-tRNA hydrolase [Ruminococcus obeum ATCC 29174]
Length = 192
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GF++ID E + + V A +G+G + PV+L KP
Sbjct: 2 YLIVGLGNPGRQYEATRHNMGFDVIDKLVEEYNVPQSGVKFNAMYGKGRIEGQPVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
+YMNLSG +A Y+K+ P ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 62 LSYMNLSGGPVRDMANYFKIDPETEMIVIYDDIDLEPGQLRIRKKGSAGGHNGIKHIIQQ 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D +L +F + R+ ++ A + + ++++L+ + +
Sbjct: 122 LGTQTFVRIKVGVGAKPKGWDLADHVLGRFGSNERKLVEEAQERACKAVEMILADSVDAA 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|313884481|ref|ZP_07818242.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620265|gb|EFR31693.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
Length = 186
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG+KY+ TRHNVGF +ID F + G++M +A + VLL KP
Sbjct: 3 LFVGLGNPGEKYEATRHNVGFAVIDQFMQDHGLAMTKQKFRADYEIWHSPKEKVLLLKPF 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGE+ P+ +YY + + ++V +DD+ L G +RLR G GGHNG+KS++
Sbjct: 63 TYMNASGEAVLPIMSYYGIGMEDLVVVYDDLDLDPGRIRLRQKGSSGGHNGMKSIISILG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL-KLLLSKGLTESA 189
N R GIGRP +L F+ + ID A+ + L L ++ ++
Sbjct: 123 SDQFNRIRVGIGRPHPGWKVVDHVLAPFDKTEQVLIDQAVGQAASALTDYLDNEDFIQTM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NKFN 186
>gi|209527283|ref|ZP_03275793.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|376003251|ref|ZP_09781065.1| peptidyl-tRNA hydrolase (PTH) [Arthrospira sp. PCC 8005]
gi|423066186|ref|ZP_17054976.1| Aminoacyl-tRNA hydrolase [Arthrospira platensis C1]
gi|209492271|gb|EDZ92616.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|375328411|emb|CCE16818.1| peptidyl-tRNA hydrolase (PTH) [Arthrospira sp. PCC 8005]
gi|406712228|gb|EKD07417.1| Aminoacyl-tRNA hydrolase [Arthrospira platensis C1]
Length = 201
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVL-L 75
P L VGLGNPG KY TRHN+GFE +D A+ G +++ + FG+ + L L
Sbjct: 5 PQLIVGLGNPGSKYDRTRHNIGFEAVDFLADKWGATLSENRRFQGVFGEAKMRSHDKLYL 64
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG++ + +YKLP VLV +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 65 LKPLTYMNRSGQAIRSVVDWYKLPPESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSAI 124
Query: 136 -----NNF----RGIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
NF GI +P + + + +L KF R+ +D LQ+ +E ++L L
Sbjct: 125 AHLGTQNFPRLRLGIDKPQAAVLNHDRETISHVLGKFPPNERQTMDKLLQQVLEAIELAL 184
Query: 182 SKGLTESARHFNT 194
G+ ++ +N+
Sbjct: 185 EDGVEKAMSLYNS 197
>gi|428304795|ref|YP_007141620.1| peptidyl-tRNA hydrolase [Crinalium epipsammum PCC 9333]
gi|428246330|gb|AFZ12110.1| peptidyl-tRNA hydrolase [Crinalium epipsammum PCC 9333]
Length = 217
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 106/187 (56%), Gaps = 11/187 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP-VLL 75
P L VGLGNP KY TRHN+GFE +DA + S IS++ +A FG+G + L
Sbjct: 21 PQLIVGLGNPEPKYDQTRHNIGFEAVDALSRSWQISLSENRKFQALFGEGRSPKGEKIRL 80
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSG++ +YKLP VLV +DDM LP G LR+R +G GGHNG+KS +
Sbjct: 81 IKPLTYMNLSGQAIRAAIDWYKLPPESVLVIYDDMDLPVGRLRMRLSGSAGGHNGMKSAI 140
Query: 136 -----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+NF GIGR + + +L KF+A I L+ + +++ + +G+
Sbjct: 141 AHLGTDNFPRLRIGIGRASSEKGSVSHVLGKFSADENPLISEVLKIVSDAVEISIKQGVE 200
Query: 187 ESARHFN 193
++ +N
Sbjct: 201 KAMNLYN 207
>gi|403743480|ref|ZP_10953064.1| peptidyl-tRNA hydrolase [Alicyclobacillus hesperidum URH17-3-68]
gi|403122724|gb|EJY56923.1| peptidyl-tRNA hydrolase [Alicyclobacillus hesperidum URH17-3-68]
Length = 190
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
+GLGNPG KY+ TRHNVGF ID A+ G+ ++ ++ G+ + PVLL KPQT
Sbjct: 4 IIGLGNPGFKYERTRHNVGFWAIDNAAQRLGVVVDRAKFQSLIGEARIAGEPVLLVKPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
YMN+SG + + +YKL + + +LV +DDM P G L+LR G GGHNG+KS++ +
Sbjct: 64 YMNVSGVAAAEIVRFYKLDVEQDILVIYDDMDFPPGQLKLRARGSAGGHNGVKSLIQSLG 123
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP D ++L F R R++ A E + G +
Sbjct: 124 TDTFCRIRIGIGRPPRGSDIIPYVLGTFPEEERVRVEKAAAAAAEAAMHAVEHGFEHAMN 183
Query: 191 HFNTI 195
+N +
Sbjct: 184 QYNRV 188
>gi|428310537|ref|YP_007121514.1| peptidyl-tRNA hydrolase [Microcoleus sp. PCC 7113]
gi|428252149|gb|AFZ18108.1| peptidyl-tRNA hydrolase [Microcoleus sp. PCC 7113]
Length = 206
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 13/194 (6%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT---VHCKATFGQGFV 68
+++ P L VGLGNP KY+ TRHN+GFE +DA A++ IS + GQG
Sbjct: 7 TSSLVIPQLIVGLGNPESKYEKTRHNIGFEAVDALAKTWQISWSENRRFQALIGEGQGAN 66
Query: 69 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
GD V L KP TYMN SG++ +YKLP L+ +DDM L G LRLR +G GGH
Sbjct: 67 GD-KVRLLKPLTYMNRSGQAIRSATDWYKLPPESTLIIYDDMDLSVGRLRLRLSGSAGGH 125
Query: 129 NGLKSVM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
NG+KS + NF GIG+ D + +L KF+ + + LQ V+ ++L
Sbjct: 126 NGMKSAIAHLGTQNFPRLRIGIGKSRADKDSVSHVLGKFSPEETQIMSEVLQLVVDAVEL 185
Query: 180 LLSKGLTESARHFN 193
L +G+ ++ +N
Sbjct: 186 ALKQGVEKAMSLYN 199
>gi|154483283|ref|ZP_02025731.1| hypothetical protein EUBVEN_00984 [Eubacterium ventriosum ATCC
27560]
gi|149735793|gb|EDM51679.1| aminoacyl-tRNA hydrolase [Eubacterium ventriosum ATCC 27560]
Length = 184
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 12/185 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+ GLGNP +Y TRHN+GF++ID A G+ + T KA G G +G V+L KP
Sbjct: 2 YAVFGLGNPDKEYDKTRHNIGFDVIDELASQMGVEVKTKRHKALCGIGNIGGEKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
QTYMNLSGES + +YKL P N ++V DD+ L G +R+R G GGHNGLKS++N+
Sbjct: 62 QTYMNLSGESVRAVMDFYKLDPENDIIVISDDINLATGRIRIRAQGSAGGHNGLKSIINH 121
Query: 138 -----FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
F+ G+G G + +L KF+ R + +++ +++++ + + +
Sbjct: 122 AGTQKFKRVRVGVGANEGNL--VNHVLGKFSKGERVLAEQGIKDAASAVEVMILEDINTA 179
Query: 189 ARHFN 193
FN
Sbjct: 180 MNKFN 184
>gi|429729369|ref|ZP_19264028.1| aminoacyl-tRNA hydrolase [Corynebacterium durum F0235]
gi|429149393|gb|EKX92371.1| aminoacyl-tRNA hydrolase [Corynebacterium durum F0235]
Length = 199
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 13/187 (6%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGI--SMNTVHCKAT--FGQGF 67
T PWL VGLGNPG +Y+ TRHNVGF ++D A+ S ++H ++ +
Sbjct: 3 ATHTDSPWLVVGLGNPGPQYETTRHNVGFMVLDELADRTPPMPSTFSIHKRSNSHVVETR 62
Query: 68 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
GD ++LAKP+++MNLSG L +YK+P ++V HD++ L +RL+ GG G
Sbjct: 63 FGDKKIILAKPRSFMNLSGGPIAALIQFYKVPKENIIVVHDELDLDFDTVRLKLGGGDNG 122
Query: 128 HNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
HNGL+S + GIGRPPG+ P ++L+ F+ E + + E +
Sbjct: 123 HNGLRSTTKSLGTKDYYRIRVGIGRPPGRQTPANYVLRPFSKEEFEGLPLICEHAAEGAE 182
Query: 179 LLLSKGL 185
L++++GL
Sbjct: 183 LIINQGL 189
>gi|218290673|ref|ZP_03494764.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
gi|218239338|gb|EED06536.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
Length = 191
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ TRHN GF ID AE ++ A G VLL KP
Sbjct: 3 VIVGLGNPGREYERTRHNAGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVKPH 62
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN+SG S G + YY++ P ++V +DDM P GV+RL+ G GGHNG+KS++ +
Sbjct: 63 TYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKVQGSAGGHNGIKSIIESL 122
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPP ++L F+ R+ L+ E + +G E+
Sbjct: 123 GTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREEEPRVRRGLETAAEAALYAVERGFAEAM 182
Query: 190 RHFNTIQK 197
+N +
Sbjct: 183 TRYNAAAR 190
>gi|335998475|ref|ZP_08564386.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis SPM0211]
gi|335348330|gb|EGM49836.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis SPM0211]
Length = 187
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGN G +Y TRHN GF +D FAE N A G + V+LAKP
Sbjct: 3 LIVGLGNIGREYDETRHNAGFMTVDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG S + +YKL VL+ HDDM L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNESGRSVRQIVDFYKLDPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
F+ GI P Q ++L +F++ R D + E V+ + L
Sbjct: 123 TEKFKRLRIGIDHPAKQK-VVDWVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|167747444|ref|ZP_02419571.1| hypothetical protein ANACAC_02164 [Anaerostipes caccae DSM 14662]
gi|317471173|ref|ZP_07930544.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
gi|167652806|gb|EDR96935.1| aminoacyl-tRNA hydrolase [Anaerostipes caccae DSM 14662]
gi|316901388|gb|EFV23331.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
Length = 190
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ TRHN+GF ID A I +++ KA G G++G VLL KPQ
Sbjct: 3 VIVGLGNPGRQYERTRHNIGFAAIDYIAGKNQIEISSKKHKALIGSGYLGGQKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSGES + +YKL + +V DD+ L G LR+R G GGHNG+KS++++
Sbjct: 63 TFMNLSGESLRGVMDFYKLEPSDFIVIFDDISLDVGQLRIRRKGSAGGHNGIKSIISHLG 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G P D ++L F+ E D + + +KL++ ++ +
Sbjct: 123 SMDFPRIKIGVGEKPKGYDLADYVLGHFSKGEIEIYDDVFPDVDDAVKLMVMDDISGAMN 182
Query: 191 HFN 193
+N
Sbjct: 183 QYN 185
>gi|433602543|ref|YP_007034912.1| Peptidyl-tRNA hydrolase [Saccharothrix espanaensis DSM 44229]
gi|407880396|emb|CCH28039.1| Peptidyl-tRNA hydrolase [Saccharothrix espanaensis DSM 44229]
Length = 189
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY+G RHNVGF ++D A G A +G +G V+LAKP+
Sbjct: 7 LVVGLGNPGPKYEGNRHNVGFLVLDELAGRIGGRFKAHKGGAEVLEGRLGGRRVVLAKPR 66
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
YMN SG A +YK+ ++V HD++ LP +R++ GG GHNGL+S+ +
Sbjct: 67 GYMNTSGGPVAGTANFYKVEPANIVVVHDELDLPFATVRMKLGGGDNGHNGLRSITKSLG 126
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+ RPPG+MDP ++L+ F+ + R+ + L + ++ LL GL +
Sbjct: 127 TKDYHRVRFGVDRPPGRMDPADYVLRNFSLVERKELAFELDRAADAVEALLELGLEAAQN 186
Query: 191 HFN 193
F+
Sbjct: 187 KFH 189
>gi|183220682|ref|YP_001838678.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910783|ref|YP_001962338.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775459|gb|ABZ93760.1| Peptidyl -tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779104|gb|ABZ97402.1| Peptidyl-tRNA hydrolase (PTH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 188
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 100/170 (58%), Gaps = 11/170 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPGDKYK TRHN+GF ++D A G+S A + GD + L KP
Sbjct: 4 FLIVGLGNPGDKYKHTRHNIGFMILDRLATEFGVSFKDAKKYAETTYSWEGDK-IHLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
+MNLSG++T LA YK+P +++LV D++ LP G ++ + GG GHNGLK ++
Sbjct: 63 LEFMNLSGKATQTLANLYKIPPSQILVVQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAKL 122
Query: 136 --NNFR----GIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
+F G+G+P G M+ F+LQ FNA R +D+ + E V L+
Sbjct: 123 GSQDFHRLRFGVGKPEKGGMEVADFVLQNFNAEERNTLDSLITESVSKLQ 172
>gi|258654662|ref|YP_003203818.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
gi|258557887|gb|ACV80829.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
Length = 195
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 107/180 (59%), Gaps = 9/180 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
P+L VGLGNPG +Y G RHNVG + D A G + A +G +G V+LAK
Sbjct: 9 PFLVVGLGNPGKQYAGNRHNVGAMVADVLAGRLGAGFKSHKAGADVVEGRLGARRVILAK 68
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P++YMNLSG +T LA ++ + RV+ HD++ LP +R++ GG GGHNGL+S+ +
Sbjct: 69 PRSYMNLSGGATAALAKFFSVVPARVIAVHDELDLPPSTIRVKQGGGEGGHNGLRSISAS 128
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+MDP F+L+ F+A R+ + L+ + ++LL+ +GL +
Sbjct: 129 LGTKDYLRVRFGIGRPPGRMDPADFVLRDFSAAERKDLGVDLEHAADAVELLVEQGLEAT 188
>gi|427735456|ref|YP_007055000.1| peptidyl-tRNA hydrolase [Rivularia sp. PCC 7116]
gi|427370497|gb|AFY54453.1| peptidyl-tRNA hydrolase [Rivularia sp. PCC 7116]
Length = 219
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 106/191 (55%), Gaps = 15/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFV-GDAPVLL 75
P L VGLGNP KY TRHN+GF IDA + S S++ K + + G V L
Sbjct: 16 PQLIVGLGNPEPKYDRTRHNIGFAAIDALSRSWQASLSENRKFKGEYAETTAPGGKKVYL 75
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSG+S G + ++YKL VL+ +DDM LP G +RLR +G GGHNG+KS +
Sbjct: 76 LKPLTYMNLSGQSIGAVLSWYKLKPESVLIIYDDMDLPVGRVRLRLSGAAGGHNGMKSTI 135
Query: 136 N-----NFR----GIGRP--PGQMD--PKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+ NF GIGRP P D + +L KF+ E + + L VE ++L L
Sbjct: 136 SHLGSKNFPRLRIGIGRPKNPATSDNGTVSHVLGKFSPEENEVMSSVLNYVVECVELCLK 195
Query: 183 KGLTESARHFN 193
KG+ ++ N
Sbjct: 196 KGVEKAMNDCN 206
>gi|404483818|ref|ZP_11019035.1| peptidyl-tRNA hydrolase [Clostridiales bacterium OBRC5-5]
gi|404343177|gb|EJZ69544.1| peptidyl-tRNA hydrolase [Clostridiales bacterium OBRC5-5]
Length = 209
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 103/188 (54%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ ++
Sbjct: 18 SKMKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEEISERKYKGLFAKVRIGNEKAII 77
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
+PQTYMN SGES Y+K+ V+V +DD+ L G LR+R G GGHNG+KS++
Sbjct: 78 LEPQTYMNNSGESVRAFMDYFKIEAADVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSLI 137
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ G+G P +MD +L +F+ ++ +D A + +EV+KL++
Sbjct: 138 AHMGTSDFPRVKVGVGEKPARMDLADHVLGRFSDTDKKLLDEAASDAIEVIKLMVDGQYD 197
Query: 187 ESARHFNT 194
+ +NT
Sbjct: 198 TAMNRYNT 205
>gi|423349148|ref|ZP_17326804.1| peptidyl-tRNA hydrolase [Scardovia wiggsiae F0424]
gi|393703377|gb|EJD65578.1| peptidyl-tRNA hydrolase [Scardovia wiggsiae F0424]
Length = 200
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 17/192 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV----GDAPVL 74
WL GLGNPG KY+GTRHN+GF D AE +S + A G+G +
Sbjct: 6 WLIAGLGNPGKKYEGTRHNMGFMCADLLAERWSVSFSDHKGLALLGKGVMSLDGAAQKFF 65
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAKP T+MN SG + ++AYY +P NR++V HDDM L G ++ ++ G GGHNG+KS+
Sbjct: 66 LAKPLTFMNDSGNAVASISAYYGIPENRIVVVHDDMDLEFGRIKTKNGGSPGGHNGIKSI 125
Query: 135 --------MNNFR-GIGRPP----GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
N R G+G + +++L FNA ++++D+ + + + ++++
Sbjct: 126 DKSLGTADYNRVRMGVGHSRRGSHAHDNAISWVLGGFNASQKQQLDSFIADAADAAEMII 185
Query: 182 SKGLTESARHFN 193
KG+ ++ FN
Sbjct: 186 FKGIEKTQEQFN 197
>gi|342733111|ref|YP_004771950.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417958990|ref|ZP_12601868.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-1]
gi|417961555|ref|ZP_12603958.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-2]
gi|417966804|ref|ZP_12608081.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-5]
gi|417968853|ref|ZP_12609830.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-co]
gi|418373370|ref|ZP_12965459.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330566|dbj|BAK57208.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380333028|gb|EIA23695.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-2]
gi|380334443|gb|EIA24850.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-1]
gi|380338858|gb|EIA27697.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-co]
gi|380339671|gb|EIA28372.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-5]
gi|380341206|gb|EIA29699.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 184
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +Y TRHNVGF M+D E IS++ + + +G G + ++ KP
Sbjct: 2 FLIVGLGNIGSRYNNTRHNVGFIMLDRICEDLNISLDNENDTSYYGTGIISGKNIMCMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+T+MNLSG + + Y+K+ ++ +LV +DD+ L +R++ G HGGHNG+K ++N
Sbjct: 62 KTFMNLSGSAVLEIINYFKISIDDLLVIYDDIYLDVSKIRIKQRGSHGGHNGIKDIINKI 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG +D ++L KF +D+ ++ +++++ L E+
Sbjct: 122 NTDKFKRIKIGIGENK-NIDLSNYVLSKFTYDEMRMLDSKYEDISTCIRMIIEGKLVEAM 180
Query: 190 RHFN 193
FN
Sbjct: 181 NLFN 184
>gi|420160718|ref|ZP_14667490.1| peptidyl-tRNA hydrolase [Weissella koreensis KCTC 3621]
gi|394746010|gb|EJF34815.1| peptidyl-tRNA hydrolase [Weissella koreensis KCTC 3621]
Length = 188
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATF-GQGFVGDAPVLLAKP 78
+ VGLGN G +Y TRHNVGF IDAFA+ GI F +G++G VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHNVGFMTIDAFAQELGIKFKQDGPHHAFVAEGWIGTDKVLLVKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE+ PL +YY L + +L+ DDM + G LRLR G GGHNG+KS+++
Sbjct: 63 TTYMNLSGEAVAPLMSYYNLAIEDILIIQDDMDMELGRLRLRTKGSAGGHNGIKSIISQL 122
Query: 139 R---------GIGRPPGQMDPKA-FLLQKFNAIARERIDTALQ 171
GI P + F+L KFN +D +++
Sbjct: 123 GTQSFNRLKFGIAHPKHEKQAVINFVLGKFNKDDAITVDQSIE 165
>gi|430751827|ref|YP_007214735.1| peptidyl-tRNA hydrolase [Thermobacillus composti KWC4]
gi|430735792|gb|AGA59737.1| peptidyl-tRNA hydrolase [Thermobacillus composti KWC4]
Length = 186
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG Y+ TRHNVGF +ID A IS+ KA G+G V V L KP
Sbjct: 3 WI-VGLGNPGPAYQSTRHNVGFMVIDELARRWNISVTQSKFKALVGEGHVKGEKVHLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES +YK + ++V +DD+ P G +RLR+ G GGHNG++S++
Sbjct: 62 MTYMNLSGESLRAFLDFYKADIADLIVVYDDLDTPLGKIRLRYQGSSGGHNGVRSIIQHL 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP + ++L F+ E++ T + + ++ L ++
Sbjct: 122 GTQQFNRIRMGISRPAPGREIVDYVLSPFDKAEAEQLKTMIAAACDAVEYALEHPFEKAM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AKFN 185
>gi|421770634|ref|ZP_16207325.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP2]
gi|421772806|ref|ZP_16209459.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP3]
gi|411181740|gb|EKS48903.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP2]
gi|411183220|gb|EKS50360.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP3]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y GT+HN+GF ++D A+ G+++N + A V D V L KPQ
Sbjct: 3 MIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTCVDDEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 63 TYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISATG 122
Query: 138 ----FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+R GI P Q ++L F + ID AL + + L+ L+
Sbjct: 123 SDEFYRLKIGIQHPQRQR-VVDWVLTPFAKTDQPVIDAALTKADDALEDWLN 173
>gi|325295184|ref|YP_004281698.1| peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065632|gb|ADY73639.1| Peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 189
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP-VLLAKP 78
L VGLGNPG KY+ TRHNVG+ ++D AE G + K + D + L KP
Sbjct: 4 LIVGLGNPGKKYEKTRHNVGWMVLDRLAEVLGTDFSKEKFKGKIAELRNDDGKKIFLLKP 63
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES G LA +YK+ LV +DD+ LP G LRLR G GGH G+ S+ F
Sbjct: 64 ITYMNLSGESVGELAKFYKIKPEETLVIYDDLDLPLGKLRLRLKGSSGGHKGVASIEQCF 123
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
GIGRP + + ++L F E + A+ + V LK ++ KG
Sbjct: 124 GSQNFSRLRIGIGRPQTKEEVVNYVLSPFREDELEALGKAIDKAVSCLKEVIKKG 178
>gi|260887179|ref|ZP_05898442.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|330839054|ref|YP_004413634.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|260863241|gb|EEX77741.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|329746818|gb|AEC00175.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
Length = 218
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 11/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y T+HNVGF ++DA AE G+ A +G +G VLL KP
Sbjct: 3 IIAGLGNPGAEYARTKHNVGFMLVDALAERLGVDAWREKFNALTAEGRIGAQKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG + GPL +YKL ++V HDDM + G +RLR G GGHNG+KS++
Sbjct: 63 TYMNESGRAVGPLLDWYKLAPEDLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLAHIG 122
Query: 136 -NNFR----GIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+F GIGRP PG K +L F A +I A+ + ++ +++ G+ +
Sbjct: 123 SEDFSRVRIGIGRPLPGWTVVK-HVLAPFPADDAPKIQEAISYLLPAVECIVTDGIDMAM 181
Query: 190 RHFNTIQK 197
+N +K
Sbjct: 182 NRYNPRRK 189
>gi|296122873|ref|YP_003630651.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
gi|296015213|gb|ADG68452.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
Length = 191
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG KY GTRHN+G+E+ + G A + + PV+L +PQT
Sbjct: 4 IVGLGNPGGKYVGTRHNIGWEVTAELSRRGGAPAGKSRFDAITREVVLKGVPVILLEPQT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF-- 138
+MNLSG S G +A +YK+ L+ DD+ LP G LR+R G GG GL ++
Sbjct: 64 FMNLSGRSVGQIAKFYKMSPADFLIVCDDLNLPLGKLRVRAGGSSGGQKGLADILQVLGT 123
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
G+GRPPG MD A++L +F R +D A+ + ++ L+ G+ +
Sbjct: 124 DAVPRLRLGVGRPPGTMDAAAYVLAQFRKDERIEVDLAVATAADAAEVWLADGVDSAMNR 183
Query: 192 FNTIQKYK 199
FN K
Sbjct: 184 FNVSSDQK 191
>gi|119390904|sp|Q4JU39.2|PTH1_CORJK RecName: Full=Peptidyl-tRNA hydrolase 1; Short=PTH 1
Length = 193
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 14/153 (9%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQ--GISMNTVHCKAT--FGQGFVGDAPVL 74
WL VGLGNPGDKY TRHNVG +I + Q S+NT H K + + V+
Sbjct: 15 WLIVGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLNT-HKKTNTDIAEVKIAGRKVV 73
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LA+P+T+MN+SG LAA++K+P ++V +DD+ G ++LR +GG GHNGLKS+
Sbjct: 74 LAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSI 133
Query: 135 MNNFR---------GIGRPPGQMDPKAFLLQKF 158
+ GIGRPPG+MDP A++L+ F
Sbjct: 134 TKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPF 166
>gi|334134032|ref|ZP_08507561.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF7]
gi|333608379|gb|EGL19677.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF7]
Length = 189
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
FVGLGNPG +Y+ TRHN+GF ID FAE G+S CK + V L KP T
Sbjct: 4 FVGLGNPGKQYEHTRHNIGFMAIDRFAEKWGVSSFQNKCKGHLAEVRVNGTKAYLLKPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGES +YK+ ++ +++ +DDM P G +RLR+ G GGHNG+KSV+
Sbjct: 64 YMNLSGESIRAFMDFYKVDVSDLVILYDDMDTPFGNIRLRYQGSAGGHNGIKSVIAHTGT 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
N R GI RP ++L F+ + L + E ++ LS+ ++
Sbjct: 124 STFNRIRMGINRPNPGYPIVDYVLSNFSKAETGALPAVLDKTCEAMEHCLSEPFEKTMAV 183
Query: 192 FN 193
FN
Sbjct: 184 FN 185
>gi|188997589|ref|YP_001931840.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
gi|259535276|sp|B2V6V4.1|PTH_SULSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188932656|gb|ACD67286.1| Aminoacyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 189
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 12/183 (6%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF-VGDAPVLLAKPQ 79
+GLGNPG+KYK TRHNVGF + D A+S ++ + + + F F D V++AKPQ
Sbjct: 5 IIGLGNPGEKYKNTRHNVGFMVADLVAKS--LNCDRKYREKAFSHIFECPDYDVIIAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + + YK+ + +LV +DD+ LP G +RLR G GGHNG+KS++N +
Sbjct: 63 TYMNLSGNAVLNILKDYKIKPSEILVVYDDLDLPLGAVRLRLKGSSGGHNGIKSIINTIK 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP + + ++L F + +D L E + +L G+ +S
Sbjct: 123 TEEFPRLKIGIGRPEKKEEVSDYVLSPFTKEEKFLLDKVLAHANECILNVLKYGIEKSMN 182
Query: 191 HFN 193
N
Sbjct: 183 MCN 185
>gi|94986155|ref|YP_605519.1| peptidyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
gi|119390934|sp|Q1IWN4.1|PTH_DEIGD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94556436|gb|ABF46350.1| Aminoacyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
Length = 214
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---VLLA 76
L VGLGNPG +Y TRHNVG+ ++D A G + A + +G AP VLL
Sbjct: 3 LVVGLGNPGSQYAQTRHNVGWLVVDEVARRWGAVWHP-DKDAEVAELRMGAAPGEKVLLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM- 135
KPQT+MN SG + GPL A+YKL +LV DD+ P G+L+ R G HGG NG++ ++
Sbjct: 62 KPQTFMNSSGRAVGPLFAFYKLEPAALLVVQDDLDSPFGLLKFRLGGRHGGQNGVRDIIR 121
Query: 136 ----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+F GI RPP +P ++L ++ A E + ++ G + +++ +S GL E
Sbjct: 122 VLGTQDFARLKIGISRPPAGWNPADWVLSRWRAEEAETLAELVRLGADAVEVWVSHGLAE 181
Query: 188 SARHFN 193
FN
Sbjct: 182 GQARFN 187
>gi|443311858|ref|ZP_21041481.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 7509]
gi|442778094|gb|ELR88364.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 7509]
Length = 211
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 15/198 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGD 70
+ + P L VGLGNPG KY TRHN+GF ID A + I+++ + FG+G
Sbjct: 6 ASQIVIPQLIVGLGNPGPKYDRTRHNIGFAAIDELARAWQINLSENRKYQGEFGEGQKQL 65
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V L KP TYMN SG+S + ++KLP VL+ +DDM LP G LRLR +G GGHNG
Sbjct: 66 NKVRLLKPLTYMNCSGQSIRAVIDWFKLPPTSVLIIYDDMDLPLGKLRLRLSGSAGGHNG 125
Query: 131 LKSV-----MNNFR----GIGRPPGQM---DPK--AFLLQKFNAIARERIDTALQEGVEV 176
+KS + NF GIG+P D K +++L +F+A + L V+
Sbjct: 126 MKSAIAHLGLQNFPRLRIGIGKPQNAASGDDAKTISYVLGQFDAKESPIVTEVLNVVVDC 185
Query: 177 LKLLLSKGLTESARHFNT 194
++L L +G+ ++ +N+
Sbjct: 186 VELCLKQGVEQAMNRYNS 203
>gi|333989611|ref|YP_004522225.1| peptidyl-tRNA hydrolase Pth [Mycobacterium sp. JDM601]
gi|333485579|gb|AEF34971.1| peptidyl-tRNA hydrolase Pth [Mycobacterium sp. JDM601]
Length = 194
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 71
A + P L VGLGNPG Y TRHNVGF ++D AE G S +H K A G +
Sbjct: 2 AESPPVLVVGLGNPGPTYARTRHNVGFMVVDLLAERIG-SGFKLHKKSGADVATGRLSGR 60
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LA+P+ YMN SG PLA +Y +P V+V HDD+ L G +RL+ GG GGHNGL
Sbjct: 61 AVVLARPRCYMNESGRQVWPLAKFYSVPPAGVVVIHDDLDLDFGRIRLKQGGGEGGHNGL 120
Query: 132 KSVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+S+ +F+ GIGRPPG+ DP AF+LQ F + RE + T ++ + +LL+
Sbjct: 121 RSIATVLGSKDFQRVRWGIGRPPGRQDPAAFVLQAFGSREREEVPTICEQAADATELLIE 180
Query: 183 KGL 185
GL
Sbjct: 181 LGL 183
>gi|146329537|ref|YP_001208995.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
gi|172047324|sp|A5EWU9.1|PTH_DICNV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146233007|gb|ABQ13985.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
Length = 189
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 108/183 (59%), Gaps = 11/183 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKP 78
L VGLGNPG++Y+ TRHN GF ++D A+ + T A FG+ + + L KP
Sbjct: 4 LIVGLGNPGEQYQKTRHNAGFWLLDQTAQDYSCRLRTEKKFFAEFGEIAINQQKIFLLKP 63
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
QT+MN SG+S + +Y + ++L+ HD++ LP G ++L+ +GGHGGHNGL+ ++
Sbjct: 64 QTFMNASGKSLAAVCRFYHIEPQQILIIHDELDLPEGKIKLKKSGGHGGHNGLRDIIAAL 123
Query: 136 ---NNFR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ +R GIGRP ++L+ +A ER++ +L G + ++ L+++G E A
Sbjct: 124 ASQDFYRLRIGIGRPENSTQVIDYVLKAPSATHMERLNESLSYGKKAIEKLITEG-DEKA 182
Query: 190 RHF 192
H+
Sbjct: 183 MHW 185
>gi|310639512|ref|YP_003944270.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|386038726|ref|YP_005957680.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa M1]
gi|309244462|gb|ADO54029.1| Peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|343094764|emb|CCC82973.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa M1]
Length = 186
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
W+ VGLGNPG +Y+ TRHNVGF +DA A I + CKA G+G +G +L KP
Sbjct: 3 WI-VGLGNPGPQYEKTRHNVGFMALDALALRHNIQITQSKCKALIGEGHIGGVKTVLIKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSGES YYK + ++V +DD+ G +RLR+ G GGHNG+KS++
Sbjct: 62 MTYMNLSGESLRAYMDYYKADMEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQHT 121
Query: 136 -----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N R GI RP ++L F +E + +++ L+ L+ +
Sbjct: 122 GTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKELLTGMIEDTCNALEYSLNHPFERTM 181
Query: 190 RHFN 193
FN
Sbjct: 182 AEFN 185
>gi|116333177|ref|YP_794704.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
gi|122270134|sp|Q03SZ9.1|PTH_LACBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116098524|gb|ABJ63673.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
Length = 185
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y TRHN GF ++DAFA+ GI++ T A FG G V VL+ KP
Sbjct: 3 MIVGLGNIGPQYDNTRHNTGFMVVDAFAQQHGIALTTRKMDARFGSGLVNGEKVLVVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG + P+ Y+K+ + V+V DDM LP G +RLR +G GGHNG+KS++
Sbjct: 63 TFMNESGRAVHPIMDYFKIDVADVMVVQDDMDLPLGRIRLRDHGSAGGHNGIKSIIAHVG 122
Query: 136 -NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
NF GI P Q ++L KF R + A V L
Sbjct: 123 TQNFGRLKVGIAHPQ-QHTVVDYVLGKFTTDQRPVFNQAADRAVAALD 169
>gi|418071052|ref|ZP_12708326.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus R0011]
gi|423078395|ref|ZP_17067078.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 21052]
gi|357538546|gb|EHJ22566.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus R0011]
gi|357551252|gb|EHJ33046.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 21052]
Length = 185
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y GT+HN+GF ++D A+ G+++N + A V D V L KPQ
Sbjct: 3 MIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATARVDDEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
TYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 63 TYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 119
>gi|365903692|ref|ZP_09441515.1| peptidyl-tRNA hydrolase [Lactobacillus malefermentans KCTC 3548]
Length = 185
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGN G +YK TRHN GF ++D+FAE ++ T +A GF+ VLL KP
Sbjct: 3 MIIGLGNIGPQYKKTRHNTGFMVVDSFAEKNNLTFTTRKMEAKLASGFINGEKVLLVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
T+MN SG + PL +YKL ++V HDDM LP G +RLR G GGHNG++S+++
Sbjct: 63 TFMNESGRAVRPLMDFYKLTPEDIIVVHDDMDLPLGKIRLRQKGSAGGHNGIRSLISHVG 122
Query: 137 --NFRGIG---RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
NF+ I P + ++L KF + D E + L+ +S
Sbjct: 123 TENFKRIRVGVEHPAKSTVVDYVLGKFTKEQQPLFDEGKDEAIGALEDWIS 173
>gi|379745757|ref|YP_005336578.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
gi|379753049|ref|YP_005341721.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-02]
gi|379760484|ref|YP_005346881.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-64]
gi|387874437|ref|YP_006304741.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MOTT36Y]
gi|406029370|ref|YP_006728261.1| peptidyl-tRNA hydrolase [Mycobacterium indicus pranii MTCC 9506]
gi|443304369|ref|ZP_21034157.1| peptidyl-tRNA hydrolase [Mycobacterium sp. H4Y]
gi|378798121|gb|AFC42257.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
gi|378803265|gb|AFC47400.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-02]
gi|378808426|gb|AFC52560.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-64]
gi|386787895|gb|AFJ34014.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MOTT36Y]
gi|405127917|gb|AFS13172.1| peptidyl-tRNA hydrolase [Mycobacterium indicus pranii MTCC 9506]
gi|442765933|gb|ELR83927.1| peptidyl-tRNA hydrolase [Mycobacterium sp. H4Y]
Length = 191
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPGD Y TRHNVGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNVGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLVGHS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
S+ N +F+ GIGRPPG+ DP AF+L+ FNA R + T ++ + +LL+
Sbjct: 120 SLANALGSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELLIEL 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|379710861|ref|YP_005266066.1| Peptidyl-tRNA hydrolase (PTH) [Nocardia cyriacigeorgica GUH-2]
gi|374848360|emb|CCF65432.1| Peptidyl-tRNA hydrolase (PTH) [Nocardia cyriacigeorgica GUH-2]
Length = 191
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 13/185 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLL 75
P L VGLGNPG +Y+ TRHNVGF + D AE G +VH K A + VL+
Sbjct: 6 PALVVGLGNPGPEYERTRHNVGFLVADVLAERVG-GRFSVHKKSGADLLTARLDGRQVLI 64
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP++YMNLSG LA ++ +P V+V HD++ LP G +RL+ GG GGHNGL+SV
Sbjct: 65 AKPRSYMNLSGRPVAALARFFSVPATEVIVVHDELDLPFGAIRLKRGGGEGGHNGLRSVS 124
Query: 136 NNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
GIGRPPG+ DP ++L+ F+A R+ + +++ + ++LLL GL
Sbjct: 125 QALTTKDYLRTRIGIGRPPGRQDPADYVLKPFSAPERKEVPVLVEQAADAVELLLRVGL- 183
Query: 187 ESARH 191
E+A++
Sbjct: 184 ETAQN 188
>gi|94265982|ref|ZP_01289705.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93453448|gb|EAT03864.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKP 78
L GLGNPG KY+ TRHN+GF ID A GIS+ +A G+G + PV+L KP
Sbjct: 3 LVAGLGNPGAKYEDTRHNIGFLFIDHLALRHGISLKEESKWEAASGRGTLWGQPVMLVKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN- 137
TYMNLSG + G LA +Y++ V VFHD++ LP G R+ G GGHNG++S++++
Sbjct: 63 LTYMNLSGRAVGRLARFYRIEAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLIDHL 122
Query: 138 -------FR-GIGRPPGQMDPKAFLLQKFNAIARERI 166
FR G+GRPP Q ++L F+ R+ +
Sbjct: 123 GSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPEERQAL 159
>gi|114565645|ref|YP_752799.1| aminoacyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|119391030|sp|Q0B0S6.1|PTH_SYNWW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114336580|gb|ABI67428.1| peptidyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 183
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 13/184 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY TRHN+GF++++ A I A G + +LL KP
Sbjct: 3 MLVGLGNPGKKYSHTRHNIGFKVLEELARRHQIEKEESRYDAIVGHLRINQEKLLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG++ PL ++KL L+ +LV +DDM LP G +R+R +GG GGH G++S+ +
Sbjct: 63 TFMNLSGKAVRPLFNWFKLELSELLVVYDDMDLPPGTVRIRASGGTGGHKGMQSICESLG 122
Query: 139 --------RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPP G +D ++L +F+ + + A+++ ++ + G+ S
Sbjct: 123 SRDFPRIRIGIGRPPGGAID---WVLGEFSESEKPLMQDAIEKAASAIECWVKSGIDASM 179
Query: 190 RHFN 193
+N
Sbjct: 180 NAYN 183
>gi|257438136|ref|ZP_05613891.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
gi|257199467|gb|EEU97751.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 79/126 (62%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL GLGNP KY GTRHN GF +D+ A GIS++ + +GQG V V+L KP
Sbjct: 72 WLIAGLGNPEAKYDGTRHNAGFAALDSLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLKP 131
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG+S PLA ++K+P + V+V DD+ G LR+R +G GGHNGLKS++
Sbjct: 132 LTYMNLSGDSIAPLAGFFKIPADHVIVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIARL 191
Query: 139 RGIGRP 144
G P
Sbjct: 192 GGENFP 197
>gi|427405711|ref|ZP_18895916.1| peptidyl-tRNA hydrolase [Selenomonas sp. F0473]
gi|425708552|gb|EKU71591.1| peptidyl-tRNA hydrolase [Selenomonas sp. F0473]
Length = 209
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y T+HNVGF ++DA A G + G+ + V L KPQ
Sbjct: 3 IIAGLGNPGAEYAQTKHNVGFMLVDALANRIGGLTWKEAFSSLVGETRIAGEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMN SG + GP+ +YYK ++V HDDM +P G +R+R GG GGHNG+KS++ +
Sbjct: 63 TYMNDSGTALGPMLSYYKCEPAELIVVHDDMDIPAGTVRIRRKGGSGGHNGIKSIIAHIG 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP +L F+ RI A+ + ++ +++ G+ +
Sbjct: 123 GEDFPRVRIGIGRPPAGWTVINHVLAPFSEEDAPRIREAIAYLLPAMECIVTDGVDMAMN 182
Query: 191 HFNTIQK 197
+N +K
Sbjct: 183 RYNPQKK 189
>gi|357057647|ref|ZP_09118505.1| peptidyl-tRNA hydrolase [Selenomonas infelix ATCC 43532]
gi|355374895|gb|EHG22186.1| peptidyl-tRNA hydrolase [Selenomonas infelix ATCC 43532]
Length = 208
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 17/191 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF----VGDAPVLL 75
+ GLGNPG +Y T+HNVGF ++++ A + +N K F +G V L
Sbjct: 3 IIAGLGNPGTEYAQTKHNVGFMLLESLA----VRLNAPAWKEDFFSAITEVRIGGEKVFL 58
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SGE+ GP+ +YYK+ + ++V HDDM +P G +R+R GG GGHNG+KS++
Sbjct: 59 VKPLTYMNNSGEALGPMLSYYKIDADELVVVHDDMDIPAGTVRIRKKGGSGGHNGIKSIL 118
Query: 136 -----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+F GIGRPP +L F A +I TA+ + ++ +++ G+
Sbjct: 119 AHVGSEDFARVRIGIGRPPAGWTVINHVLAPFAAEDVSKIRTAIDYLLPAVECIVTDGVD 178
Query: 187 ESARHFNTIQK 197
+ +N +K
Sbjct: 179 LAMNKYNPHKK 189
>gi|300864784|ref|ZP_07109634.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
gi|300337188|emb|CBN54782.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
Length = 211
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 106/191 (55%), Gaps = 14/191 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGF-VGDAPVLL 75
P L VGLGNP KY TRHN+GF +DA A S IS++ +A FG+G + L
Sbjct: 13 PQLIVGLGNPEPKYNRTRHNIGFAAVDALANSWQISLSENRKFQAEFGEGMGPQREKIRL 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMNLSG++ +YKLP VL +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 73 LKPLTYMNLSGQAIRAAIDWYKLPPESVLAVYDDMDLPVGRLRLRLSGSAGGHNGMKSAI 132
Query: 136 NNF---------RGIGRPPGQMDPK---AFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
+ GIG+P + K + +L KF+ + +D L+ VE ++L +
Sbjct: 133 AHLGTDKFPRLRIGIGKPQSSSNDKETISHVLGKFSLEESQLMDKVLKLVVEAVELSQKQ 192
Query: 184 GLTESARHFNT 194
G+ ++ +N+
Sbjct: 193 GVEKAMSLYNS 203
>gi|331003612|ref|ZP_08327108.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412332|gb|EGG91724.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 211
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ ++
Sbjct: 20 SKMKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAII 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
+P TYMN SGES Y+K+ + V+V +DD+ L G LR+R G GGHNG+KS++
Sbjct: 80 LEPLTYMNNSGESVRAFMDYFKIDASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLI 139
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ G+G P +MD +L +FN ++ +D A + +E +KL++
Sbjct: 140 AHMGTSDFPRIKVGVGEKPAKMDLADHVLGRFNDTDKKLLDEAASDAIEAIKLMVEDQYD 199
Query: 187 ESARHFNT 194
+ +NT
Sbjct: 200 TAMNRYNT 207
>gi|409992238|ref|ZP_11275440.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
gi|291569168|dbj|BAI91440.1| peptidyl-tRNA hydrolase [Arthrospira platensis NIES-39]
gi|409936902|gb|EKN78364.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
Length = 201
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFV-GDAPVLL 75
P L VGLGNPG KY TRHN+GFE +D A+ G +++ + FG+ + + L
Sbjct: 5 PQLIVGLGNPGSKYDRTRHNIGFEAVDFLADKWGANLSENRRFQGVFGEAKMRSHNKLYL 64
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG++ + +YKLP VLV +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 65 LKPLTYMNRSGQAIRSVVDWYKLPPESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSAI 124
Query: 136 -----NNFR----GIGR--PPGQMDPK---AFLLQKFNAIARERIDTALQEGVEVLKLLL 181
NF GI + PP + + +L KF R+ +D LQ+ +E ++L L
Sbjct: 125 AHLGTQNFPRLRLGIDKPQPPASSSDRETISHVLGKFPPNERQTMDKLLQQVLEAIELAL 184
Query: 182 SKGLTESARHFNT 194
G+ ++ +N+
Sbjct: 185 EDGVEKAMSLYNS 197
>gi|414075566|ref|YP_006994884.1| peptidyl-tRNA hydrolase [Anabaena sp. 90]
gi|413968982|gb|AFW93071.1| peptidyl-tRNA hydrolase [Anabaena sp. 90]
Length = 213
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 16/192 (8%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQG-FVGD 70
TAV P L VGLGNP KY TRHN+GF ID A + IS+ + FG+G G
Sbjct: 9 TAVVIPQLIVGLGNPEPKYDQTRHNIGFAAIDTLARAWQISLAENRKFQGEFGEGNAAGK 68
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
+ L KP TYMNLSG++ + +YK+P +L+ +DD+ LP G RLR +G GGHNG
Sbjct: 69 GKIRLLKPLTYMNLSGQAIQAVTNWYKIPPESILIIYDDLDLPLGKTRLRLSGSAGGHNG 128
Query: 131 LKSVMNNFR---------GIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVEV 176
+KS++++ GIG+P +D + +L +F+A + + L VE
Sbjct: 129 MKSIISHLNTQNFPRLRIGIGKPKNAIDGDNSHTVSHVLGRFSATENKVMSQVLNFVVEC 188
Query: 177 LKLLLSKGLTES 188
++ +G+ +S
Sbjct: 189 VEFSFKQGIEKS 200
>gi|16331675|ref|NP_442403.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|383323417|ref|YP_005384271.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326586|ref|YP_005387440.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492470|ref|YP_005410147.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437738|ref|YP_005652463.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|451815827|ref|YP_007452279.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|2499989|sp|Q59989.1|PTH_SYNY3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1001232|dbj|BAA10473.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|339274771|dbj|BAK51258.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|359272737|dbj|BAL30256.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275907|dbj|BAL33425.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279077|dbj|BAL36594.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960691|dbj|BAM53931.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7613]
gi|451781796|gb|AGF52765.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
Length = 194
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLA 76
P L VGLGNP KY TRHN+GF ++DA A + S + + FG+G + L
Sbjct: 3 PKLIVGLGNPEPKYDQTRHNIGFAVVDALAITWQCSWYDHKRFQGWFGEGLMAGQKTCLL 62
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP+TYMN SG++ + +YKL VLV +DDM LP G LRLR G GGHNG+KS+++
Sbjct: 63 KPRTYMNRSGQAVRAVVDWYKLDPQSVLVVYDDMDLPLGRLRLRQTGSAGGHNGMKSLIS 122
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIG+ G D A +L KF+ ++ +L E + L G+ +
Sbjct: 123 HLGTQDFPRLRLGIGKSDGSKDTIAHVLGKFSPSELPIVEKSLDLATEAIAHSLHHGIAK 182
Query: 188 SARHFN 193
+ FN
Sbjct: 183 TMSLFN 188
>gi|374992834|ref|YP_004968333.1| peptidyl-tRNA hydrolase [Desulfosporosinus orientis DSM 765]
gi|357211200|gb|AET65818.1| peptidyl-tRNA hydrolase [Desulfosporosinus orientis DSM 765]
Length = 185
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG +Y TRHN+GF ++D AE + + + +G + + L KPQ
Sbjct: 3 VIIGLGNPGAQYAETRHNIGFLLVDLLAEVHKLQFRS-KFQGLLAEGNIEGERLFLLKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S L+ +YKL +LV DDM LP G +RLR +G GGHNG+KS+
Sbjct: 62 TFMNLSGRSVSELSRFYKLSQEDLLVVQDDMDLPLGKIRLRDHGSSGGHNGIKSIQFELG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+GRPP + DP ++L F + +D L + + L + KG E A
Sbjct: 122 SERLWRLKLGVGRPPKEWDPARYVLSPFAEDETKLLDDVLGRAEKAVYLWI-KGEYERA 179
>gi|254821213|ref|ZP_05226214.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
Length = 191
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPGD Y TRHNVGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHNVGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLLGHS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 VVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
S+ N +F+ GIGRPPG+ DP AF+L+ FNA R + T ++ + +LL+
Sbjct: 120 SLANALGSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELLIEL 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|303324919|pdb|3KJZ|A Chain A, Crystal Structure Of Native Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis
gi|311772055|pdb|3KK0|A Chain A, Crystal Structure Of Partially Folded Intermediate State
Of Peptidyl- Trna Hydrolase From Mycobacterium Smegmatis
gi|312208144|pdb|3P2J|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis At 2.2 A Resolution
Length = 191
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 116/195 (59%), Gaps = 15/195 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG Y TRHN+GF + D A G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIG-SAFKVHKKSGAEVVTGRLAGTT 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ MN SG GPLA +Y +P +++V HD++ + G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRISMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV + NF G+GRPPG+ DP AF+L+ F + R + T +++ + +LL+++
Sbjct: 120 SVASALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTSAERAEVPTIVEQAADATELLIAQ 179
Query: 184 GLTESARHFNTIQKY 198
GL E A+ NT+ +
Sbjct: 180 GL-EPAQ--NTVHAW 191
>gi|427414474|ref|ZP_18904664.1| peptidyl-tRNA hydrolase [Veillonella ratti ACS-216-V-Col6b]
gi|425714434|gb|EKU77439.1| peptidyl-tRNA hydrolase [Veillonella ratti ACS-216-V-Col6b]
Length = 192
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ T+HN+GF +IDA A + + KA + VLL KPQ
Sbjct: 3 MVVGLGNPGREYEKTKHNIGFMVIDAMAAKEAHTPWREDFKALITTITIDGEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
T+MN SGES GPL YYK+ + V +DDM LP G +R+R NG GGHNG+KS++
Sbjct: 63 TFMNASGESVGPLMRYYKIDASDVYCVYDDMDLPVGKIRIRPNGSAGGHNGIKSLIAHMG 122
Query: 137 -----NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+FR GIGRP Q +L F +++++ +++ + + L GL +
Sbjct: 123 TSEFPHFRFGIGRPLPQWTVIDHVLAPFPEEQQDKVNKGIEDMAKAILGTLEVGLDKGMN 182
Query: 191 HFN 193
+N
Sbjct: 183 LYN 185
>gi|363900456|ref|ZP_09326961.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB1]
gi|395208890|ref|ZP_10398055.1| aminoacyl-tRNA hydrolase [Oribacterium sp. ACB8]
gi|361956330|gb|EHL09648.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB1]
gi|394705491|gb|EJF13017.1| aminoacyl-tRNA hydrolase [Oribacterium sp. ACB8]
Length = 189
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAF-AESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
WL GLGNP KY GTRHN GF IDA E G + + F + +G V++ K
Sbjct: 2 WLIAGLGNPERKYDGTRHNAGFAAIDALLDELGGKGLESTKFHGAFTKLRIGAEEVIILK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMNLSG+S P+A +YK+P +VLV D++ L G +R+R G GGHNGLKS++
Sbjct: 62 PLTYMNLSGDSIAPMANFYKIPAEQVLVISDEISLSPGSIRIRKKGSAGGHNGLKSIIAR 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G D A +L F+ +R++ A E + +++G+ ++
Sbjct: 122 LGTEDFPRIRLGVGDKDENRDLAAHVLGHFSKEEEKRMEEAYAEVAKACICTVTEGIEKA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MNLYN 186
>gi|295101118|emb|CBK98663.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii L2-6]
Length = 192
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 101/185 (54%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL GLGNP KY GTRHN GF +D A GIS++ + +GQG V V+L KP
Sbjct: 7 WLIAGLGNPEPKYDGTRHNTGFAALDYLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLKP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMNLSG+S GPLA ++K+P + V+V DD+ G LR+R +G GGHNGLKS++
Sbjct: 67 LTYMNLSGDSIGPLAGFFKIPSDHVIVLCDDITQDPGKLRIRPSGSAGGHNGLKSIIARL 126
Query: 136 --NNFR----GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
NF G+G +P D ++L KF + + + V L++ L +
Sbjct: 127 GGENFPRIRIGVGAKPRPDYDLADWVLGKFPPDDAKALADRCPDIAAVATLIMDGKLGLA 186
Query: 189 ARHFN 193
+N
Sbjct: 187 QSKYN 191
>gi|257792490|ref|YP_003183096.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
gi|257476387|gb|ACV56707.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
Length = 185
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG++Y+ TRHN GF+ +D AE G C A +G D ++LAKPQ
Sbjct: 3 LIVGLGNPGEEYEHTRHNAGFDAVDLIAEEVGARYWKTECGALTAKGAYRDHDLVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
+YMN SG L Y + ++V HD++ + G +R++ GGH GHNGL+++ +
Sbjct: 63 SYMNTSGGPVKQLMNAYGVDAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRAICDKLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+M ++L K A + A G + L+ GL ++ +
Sbjct: 123 TRDWHRVRVGIGRPPGRMPVVDWVLSKPKKDAADDFVQATDRGAQAALSLVQVGLEKTQQ 182
Query: 191 HFN 193
FN
Sbjct: 183 AFN 185
>gi|319934922|ref|ZP_08009367.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
gi|319810299|gb|EFW06661.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
Length = 184
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG Y+ TRHNVGF ++D ++ +S++T K + + V+L KP
Sbjct: 3 LIVGLGNPGKDYENTRHNVGFMVMDRLSDVMNVSISTTKFKGEYVKFKYHGEDVILLKPM 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGES + Y+K+ + +LV +DDM +P G LRLR +G GGHNG+KS++
Sbjct: 63 TYMNNSGESVRQVMDYFKIDVEDLLVVYDDMDMPVGKLRLRQSGSAGGHNGVKSIIAHVG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F+ GI + P ++ ++L +F + ID +++ V+ ++ L+KG +
Sbjct: 123 TQSFQRIRVGIDKHP-RIKVVDYVLGRFQKDEQPLIDQGVEDAVKAIETYLNKGFVAAMN 181
Query: 191 HFN 193
+N
Sbjct: 182 VYN 184
>gi|417043747|ref|ZP_11948575.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
gi|328478087|gb|EGF47960.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
Length = 185
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y GT+HN+GF ++D A+ G+++N + A V D V L KPQ
Sbjct: 3 MIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
TYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 63 TYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 119
>gi|440681983|ref|YP_007156778.1| peptidyl-tRNA hydrolase [Anabaena cylindrica PCC 7122]
gi|428679102|gb|AFZ57868.1| peptidyl-tRNA hydrolase [Anabaena cylindrica PCC 7122]
Length = 214
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 16/197 (8%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDA 71
A+ P L VGLGNP KY TRHN+GF +DA A + I + + +FG+G G
Sbjct: 9 ALVIPQLIVGLGNPEPKYDQTRHNIGFAAVDALARAWQIPLAENRKFQGSFGEGIAPGGG 68
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V L KP TYMN SG+S + ++YKLP VL+ +DDM LP G RLR +G GGHNG+
Sbjct: 69 KVRLLKPLTYMNRSGQSIQAVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSAGGHNGM 128
Query: 132 KSVMNNFR---------GIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVEVL 177
KS +++ GIG+P G D + +L +F+A + + L VE +
Sbjct: 129 KSTISHLSSQNFPRLRIGIGKPKGVGDDDNSETVSHVLGRFSAAENKLMSLVLDFVVECV 188
Query: 178 KLLLSKGLTESARHFNT 194
+L +G+ ++ N+
Sbjct: 189 ELSFKQGVEKAMNRCNS 205
>gi|253580890|ref|ZP_04858152.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847732|gb|EES75700.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 193
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHN+GF+ +D E + V A +G+ +G V+L KP
Sbjct: 2 YLVVGLGNPGKQYEATRHNMGFDTVDRLVEDYNVPQGGVKFNAMYGKTMIGGEKVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
++MNLSG +A Y+K+ P + ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 62 LSFMNLSGGPVREMANYFKIDPESELIVIYDDIDLEPGQLRIRKQGSAGGHNGIKDIIRQ 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+G P D +L +F+ R+ +D A+ + + + +++S+G +
Sbjct: 122 LGTEKFLRIKVGVGAKPKGWDLADHVLGRFSTEDRKLVDEAIAKAAKAVDIIISQGTDAA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MNEYN 186
>gi|418047100|ref|ZP_12685188.1| Peptidyl-tRNA hydrolase [Mycobacterium rhodesiae JS60]
gi|353192770|gb|EHB58274.1| Peptidyl-tRNA hydrolase [Mycobacterium rhodesiae JS60]
Length = 191
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 114/188 (60%), Gaps = 13/188 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG +Y TRHN+GF + D A G VH + A G +G P
Sbjct: 1 MAEPLLVVGLGNPGPQYAKTRHNLGFMVADVLAARMGGQFK-VHKRSGAEIVTGRLGHRP 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+TYMN SG GPLA +Y + ++V HD++ + G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRTYMNESGRQVGPLAKFYSVMPTDLIVIHDELDIDFGRIRLKLGGGEGGHNGLR 119
Query: 133 SVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV + NF+ G+GRPPG+ DP A++L+ F+A R + ++ + +LL+
Sbjct: 120 SVASSLGTKNFQRVRIGVGRPPGRKDPAAYVLETFSAAERPEVPAICEQAADATELLIEV 179
Query: 184 GLTESARH 191
GL E+A++
Sbjct: 180 GL-ETAQN 186
>gi|383788979|ref|YP_005473548.1| peptidyl-tRNA hydrolase [Caldisericum exile AZM16c01]
gi|381364616|dbj|BAL81445.1| peptidyl-tRNA hydrolase [Caldisericum exile AZM16c01]
Length = 189
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 12/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVLL 75
L +GLGN G +Y+ TRHNVGF +ID +++ I +N A +G+G V + ++L
Sbjct: 3 LIIGLGNIGKEYENTRHNVGFMVIDELSKAWKIKVNFAKFNALYGKGTVNISGNEYNIIL 62
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP TYMNLSG + L + +P ++V HDD+ LP G LR++ G GH G++S+
Sbjct: 63 AKPLTYMNLSGRAVKQLMDGFLVPSTHIIVIHDDLDLPLGTLRIKVGGSDAGHKGVRSIK 122
Query: 136 NNFR--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIGRP + + ++L++F + I ++ V+ ++ ++SKG+
Sbjct: 123 ELVEDPIIRVRIGIGRPINKEEVVNYVLEEFGKDEKFAILDVIKRSVKAIETIISKGVEV 182
Query: 188 SARHFN 193
+ R FN
Sbjct: 183 AQREFN 188
>gi|199598793|ref|ZP_03212205.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
gi|199590298|gb|EDY98392.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
Length = 183
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y GT+HN+GF ++D A+ G+++N + A V D V L KPQ
Sbjct: 1 MIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKPQ 60
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
TYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 61 TYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 117
>gi|333921147|ref|YP_004494728.1| peptidyl-tRNA hydrolase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483368|gb|AEF41928.1| Peptidyl-tRNA hydrolase [Amycolicicoccus subflavus DQS3-9A1]
Length = 189
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 10/167 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAK 77
++ GLGNPG +Y TRHNVG+ + D A G + +A + + V+LAK
Sbjct: 3 FVVAGLGNPGTQYATTRHNVGYLVADVLAARYGARFSGQKRTRADLAEVRLSGVKVVLAK 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMNLSG A ++ +P V+ HDD+ L GV+RL+ GG GGHNGL+S+ +
Sbjct: 63 PHTYMNLSGGPISATAKFFSVPPENVIAVHDDLDLDFGVVRLKRAGGEGGHNGLRSLTAH 122
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
G+GRPPGQM +++L+ F+A R+ + ++E +
Sbjct: 123 LHTRDYLRVRLGVGRPPGQMAAASYVLKPFSATERKELGVIVEEAAD 169
>gi|159902816|ref|YP_001550160.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
gi|159887992|gb|ABX08206.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
Length = 206
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 106/200 (53%), Gaps = 19/200 (9%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF---VG 69
+ A P L VGLGNPG KY TRHNVGF +++ A + S +T K FGQ +G
Sbjct: 2 STSADPSLLVGLGNPGSKYSSTRHNVGFMVLEKLATKECASFST--SKKLFGQLAEIGIG 59
Query: 70 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
L P TYMN SG + ++ L N +L+ DD+ LP G LRLR+ GG GGHN
Sbjct: 60 AQKRRLLMPDTYMNESGRAVKAAMHWFGLQPNHILIIVDDIDLPLGKLRLRYQGGAGGHN 119
Query: 130 GLKSVMNNF---------RGIGRP-----PGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
GLKS++NN GIG+P Q+ + +L FN+ + + + L E V
Sbjct: 120 GLKSIINNLGTQNFSRLRVGIGKPVIAFEEKQVRTVSHVLGAFNSKEQLVMQSVLNEVVL 179
Query: 176 VLKLLLSKGLTESARHFNTI 195
L L+ GL ++A H N++
Sbjct: 180 GLNLIQEVGLEKAANHLNSM 199
>gi|339634732|ref|YP_004726373.1| peptidyl-tRNA hydrolase [Weissella koreensis KACC 15510]
gi|338854528|gb|AEJ23694.1| peptidyl-tRNA hydrolase [Weissella koreensis KACC 15510]
Length = 188
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 92/163 (56%), Gaps = 11/163 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATF-GQGFVGDAPVLLAKP 78
+ VGLGN G +Y TRHNVGF IDAFA+ GI+ F +G++G VLL KP
Sbjct: 3 IIVGLGNIGKEYDQTRHNVGFMTIDAFAQELGINFKQDGPHHAFVAEGWIGTDKVLLVKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
TYMNLSGE+ PL YY L + +L+ DDM + G LRLR G GGHNG+KS+++
Sbjct: 63 TTYMNLSGEAVAPLMKYYNLVIEDLLIIQDDMDMELGRLRLRTKGSAGGHNGIKSIISQL 122
Query: 137 ---NFR----GIGRPPGQMDPKA-FLLQKFNAIARERIDTALQ 171
NF GI P + F+L KFN +D +++
Sbjct: 123 GTQNFNRLKFGIAHPKHEKQAVINFVLGKFNKDDAITVDQSIE 165
>gi|359476471|ref|XP_002265105.2| PREDICTED: uncharacterized protein LOC100244524 [Vitis vinifera]
Length = 313
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 68/91 (74%)
Query: 50 QGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDD 109
Q I M+TVH K F QG GD PV LAKP TYM+LSG+S GPLAAY KLPL+ V+VFHDD
Sbjct: 136 QEIPMDTVHYKEFFRQGCAGDVPVFLAKPWTYMDLSGKSAGPLAAYCKLPLDSVVVFHDD 195
Query: 110 MGLPCGVLRLRHNGGHGGHNGLKSVMNNFRG 140
+GLP G+LRL H GG HNGL SV+ FRG
Sbjct: 196 IGLPWGLLRLHHKGGRRNHNGLMSVILYFRG 226
>gi|258510198|ref|YP_003183632.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476924|gb|ACV57243.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 191
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ TRHN GF ID AE ++ A G VLL KP
Sbjct: 3 VIVGLGNPGREYERTRHNAGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVKPH 62
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN+SG S G + YY++ P ++V +DDM P GV+RL+ G GGHNG+KS++ +
Sbjct: 63 TYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKAQGSAGGHNGIKSIIESL 122
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPP ++L F+ + AL+ + + +G E+
Sbjct: 123 GTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREEEPHVRRALETAADAALYAVERGFAEAM 182
Query: 190 RHFNTIQK 197
+N +
Sbjct: 183 TRYNAAAR 190
>gi|335042006|ref|ZP_08535033.1| peptidyl-tRNA hydrolase [Methylophaga aminisulfidivorans MP]
gi|333788620|gb|EGL54502.1| peptidyl-tRNA hydrolase [Methylophaga aminisulfidivorans MP]
Length = 190
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPVLL 75
W+ GLGNPG +Y+GTRHNVGF ++D A G++ N H + Q + V L
Sbjct: 4 WIIAGLGNPGSQYEGTRHNVGFWLLDQLARELGVNFTVQNRYHGELV--QCSLDGHKVFL 61
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP T+MN SG+S PLA ++K+PL +LV HD++ L G ++L+ +GGHGGHNGL+ ++
Sbjct: 62 LKPLTFMNRSGQSVAPLANFFKIPLENILVIHDELDLSPGTVKLKRDGGHGGHNGLRDII 121
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
GIG P ++L K + R++I+ A+ + +L +LS +
Sbjct: 122 AQTGGKQFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQIEQAIDNVLRILPEVLSGNMD 181
Query: 187 ES 188
++
Sbjct: 182 KA 183
>gi|407648568|ref|YP_006812327.1| peptidyl-tRNA hydrolase [Nocardia brasiliensis ATCC 700358]
gi|407311452|gb|AFU05353.1| peptidyl-tRNA hydrolase [Nocardia brasiliensis ATCC 700358]
Length = 193
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 107/186 (57%), Gaps = 12/186 (6%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFV 68
+V P L VGLGNPG +Y+ TRHNVGF + D AE G VH K A Q +
Sbjct: 1 MTDSVTGPALVVGLGNPGTEYERTRHNVGFLVADVLAERVGGRFG-VHKKSGADLLQARL 59
Query: 69 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
VL+AKP+T+MNLSG LA ++ +P V+V HD++ LP G +RL+ GG GGH
Sbjct: 60 DGRQVLIAKPRTFMNLSGRPVAALAKFFSVPPTEVIVVHDELDLPFGEIRLKRGGGEGGH 119
Query: 129 NGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
NGL+SV + GIGRPPG+ DP ++L+ F R+ I +++ + ++L
Sbjct: 120 NGLRSVSSALTTKDYLRTRIGIGRPPGRQDPADYVLKPFATPERKEIPVIVEQAADAVEL 179
Query: 180 LLSKGL 185
LL GL
Sbjct: 180 LLRVGL 185
>gi|404417268|ref|ZP_10999071.1| peptidyl-tRNA hydrolase [Staphylococcus arlettae CVD059]
gi|403490366|gb|EJY95908.1| peptidyl-tRNA hydrolase [Staphylococcus arlettae CVD059]
Length = 190
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE+ID +++ K + +G V+ +P T
Sbjct: 4 IVGLGNIGKRFESTRHNIGFEVIDYMLAQHNFTLDKQKFKGAYTIERIGQEKVMFIEPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ PL YY + + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVAPLMDYYNIEVEDLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQMLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+ RP M ++LQKF+ R +D + ++ + E++R
Sbjct: 124 DQFKRIRIGVDRPSNGMAIVDYVLQKFSKTERVIMDKVIDHSARAVEAFI-----ETSRF 178
Query: 192 FNTIQKY 198
N + +Y
Sbjct: 179 DNVMNEY 185
>gi|429219948|ref|YP_007181592.1| peptidyl-tRNA hydrolase [Deinococcus peraridilitoris DSM 19664]
gi|429130811|gb|AFZ67826.1| peptidyl-tRNA hydrolase [Deinococcus peraridilitoris DSM 19664]
Length = 214
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHNVG+ ++D A QG A + +G VLL KPQ
Sbjct: 3 LIVGLGNPGAQYAATRHNVGWLVVDELAR-QGEQTWRKDRDAEVCEVRLGAQKVLLVKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + PL +YKL L+ +LV DD+ P G+L++R G GG NGLK ++
Sbjct: 62 TFMNTSGRAVVPLVRFYKLALSDLLVVQDDLDSPFGLLKVRLGGRSGGQNGLKDIIRGLG 121
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RPP D ++L K+ A + T + G + GL E+ R
Sbjct: 122 SEDFARLKIGISRPPPGWDVSGWVLSKWRAEEEATLRTLIDLGTRAAAIWAESGLLEAQR 181
Query: 191 HFN 193
FN
Sbjct: 182 AFN 184
>gi|399923900|ref|ZP_10781258.1| peptidyl-tRNA hydrolase [Peptoniphilus rhinitidis 1-13]
Length = 189
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG +Y+ TRHN+GF+ IDA A+ I +N + K G+G + V+L KP
Sbjct: 2 YIIVGLGNPGKRYEDTRHNIGFKTIDALADKLNIKVNKIKFKGLVGEGRIAGEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
T+MN SGES + +YKL +LV DD+ + L+++ NG G HNGLKS++N
Sbjct: 62 HTFMNNSGESVVEILNFYKLKPENLLVVVDDIDIEFAQLKIKKNGSAGTHNGLKSIVNLI 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
F+ G+G+ D +F+L F + ++ I+ A+ E + ++ G+ +
Sbjct: 122 GSKDFARFKIGVGKKHPNEDLASFVLSNFPSRDKKHIEDAVDACSESIIKTVTDGIDVAM 181
Query: 190 RHFNT 194
+N
Sbjct: 182 NFYNN 186
>gi|306835688|ref|ZP_07468694.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
gi|304568406|gb|EFM43965.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
Length = 177
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 12/176 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVLL 75
P L VGLGNPG KY GTRHN+GF++ D A + +S +VH K +G + V+
Sbjct: 3 PLLVVGLGNPGPKYSGTRHNIGFDVADELA-GELMSSFSVHKKTNTEVAEGMLSGRKVIC 61
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP+++MNLSG LA Y+ L ++V HD++ L G ++LR GG GHNGL+S
Sbjct: 62 AKPRSFMNLSGGPIKALAQYFHLTPADIVVVHDELELDFGTVKLRQGGGDHGHNGLRSTT 121
Query: 136 NNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+ GIGRPPG+MDP +F+L+ ++ + I + V ++ L
Sbjct: 122 KSLGTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEKVEIPILCADAVAEIRSALD 177
>gi|303234870|ref|ZP_07321495.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
gi|302493988|gb|EFL53769.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
Length = 189
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+G+ V+L KP
Sbjct: 2 YLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 62 STYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLI 121
Query: 136 --NNFRGIGRPPGQMDP---KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F I GQ D K F+L +F+ E ++ + + ++ + + +
Sbjct: 122 QSQDFARIKVSVGQNDKYDLKDFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDYAMN 181
Query: 191 HFN 193
+FN
Sbjct: 182 NFN 184
>gi|338733704|ref|YP_004672177.1| peptidyl-tRNA hydrolase [Simkania negevensis Z]
gi|336483087|emb|CCB89686.1| peptidyl-tRNA hydrolase [Simkania negevensis Z]
Length = 190
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 14/187 (7%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLL 75
+ +L GLGNPG KY+ TRHN GF ++ AFAE QG + + + G V ++ V+L
Sbjct: 4 KGFLITGLGNPGKKYENTRHNFGFMVVKAFAEKQGWTFKADSNLQGEIASGTVSESKVIL 63
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
P+TYMNLSG+S + YYK+ L LV DD+ L G LR R G GGHNGLK +
Sbjct: 64 LLPKTYMNLSGQSVRKVLDYYKIDLTHFLVVADDIALDFGTLRFREKGSSGGHNGLKDIE 123
Query: 136 NNF---------RGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL-KLLLSKG 184
++ GIG R G ++ ++L F+A ++ + ++EGV+ L K L+ +
Sbjct: 124 SHLGTQEYQRLRLGIGDRDHGYLED--YVLSPFSAEEQKDLPKVIEEGVDFLDKWLMKET 181
Query: 185 LTESARH 191
+SA+
Sbjct: 182 YEKSAKE 188
>gi|302530285|ref|ZP_07282627.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
gi|302439180|gb|EFL10996.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
Length = 197
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 9/175 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y G RHNVGF ++D A G A +G + A V+L KP+
Sbjct: 13 LLAGLGNPGPQYAGNRHNVGFMVLDELAGRIGGKFKAHRSGAEVLEGRLAGARVVLVKPR 72
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
++MNLSG A ++K+P + V+V HD++ + G L+L+ GG GHNGL+S+ +
Sbjct: 73 SFMNLSGGPVVGAARFFKVPPSGVVVVHDELDVDFGALKLKLGGGDNGHNGLRSITKSLG 132
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
GIGRPPG+ DP F+L+ F+ + R+ + + + + L+S+GL
Sbjct: 133 TRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPFEIDRCADATEALISRGL 187
>gi|295694756|ref|YP_003587994.1| peptidyl-tRNA hydrolase [Kyrpidia tusciae DSM 2912]
gi|295410358|gb|ADG04850.1| peptidyl-tRNA hydrolase [Kyrpidia tusciae DSM 2912]
Length = 184
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL GLGNPG +Y TRHN GF +ID A +S+ + + VG+ VLL KP
Sbjct: 2 WLIAGLGNPGPQYAQTRHNAGFMVIDRLAARWSVSVTSRGFHSLTASTRVGEEQVLLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SG + G +Y+L R++V +DD+ LP G +RLR+ G GGHNG+KS++ +
Sbjct: 62 QTFMNESGLAVGEAVRWYRLGPERLIVVYDDLDLPLGKIRLRYKGSSGGHNGMKSILQHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRP +L F+ + AL VE++++ + +G ++
Sbjct: 122 GTETFGRVRIGIGRPLKGRSVIDHVLSPFSPDELSTVRPALNRAVELIEIAVQEGFEKA 180
>gi|260577724|ref|ZP_05845659.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
gi|258604119|gb|EEW17361.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
Length = 209
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 100/175 (57%), Gaps = 25/175 (14%)
Query: 7 LRRGFCTAVARP----------WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQ--GISM 54
L RG T VA P WL +GLGNPGDKY TRHNVG +I + Q S+
Sbjct: 10 LERGLET-VASPNKKQHTNSDTWLIIGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASL 68
Query: 55 NTVHCKAT--FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGL 112
+T H K + + V+LA+P+T+MN+SG LAA++K+P ++V +DD+
Sbjct: 69 ST-HKKTNTDIAEVKIAGRKVVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEG 127
Query: 113 PCGVLRLRHNGGHGGHNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKF 158
G ++LR +GG GHNGLKS+ + GIGRPPG+MDP A++L+ F
Sbjct: 128 DPGAVKLRQSGGDKGHNGLKSITKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPF 182
>gi|300790049|ref|YP_003770340.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|384153572|ref|YP_005536388.1| peptidyl-tRNA hydrolase [Amycolatopsis mediterranei S699]
gi|399541929|ref|YP_006554591.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
S699]
gi|299799563|gb|ADJ49938.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|340531726|gb|AEK46931.1| peptidyl-tRNA hydrolase [Amycolatopsis mediterranei S699]
gi|398322699|gb|AFO81646.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
S699]
Length = 197
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y G RHNVGF ++D A G T +G + V+L KP+
Sbjct: 13 LLAGLGNPGPQYAGNRHNVGFMVLDELAARIGGKFKTHKSGGEVLEGRLAGRRVVLVKPR 72
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
+YMNLSG A +YK+ + V+V HD++ + G L+L+ GG GHNGL+S+ +
Sbjct: 73 SYMNLSGGPVAGAAKFYKIEPSGVVVVHDELDVDFGTLKLKFGGGDNGHNGLRSISKSLG 132
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+ DP F+L+ F+ + R+ + + + + L+ GL +
Sbjct: 133 TRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPLEVDRCADATEALIGTGLAAAQN 192
Query: 191 HFNT 194
F+
Sbjct: 193 SFHA 196
>gi|268608428|ref|ZP_06142155.1| peptidyl-tRNA hydrolase [Ruminococcus flavefaciens FD-1]
Length = 208
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
++ GLGNPG +Y TRHN GF ++D A G +N + K + +GD LL K
Sbjct: 22 EYVIAGLGNPGMEYDNTRHNAGFMVLDMLASQLGEEINRLRFKGKTAEVMIGDKRCLLLK 81
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
P TYMN SGES +YK+ ++ ++V DD+ L G LR+R G HGGHNGL+S+
Sbjct: 82 PTTYMNNSGESIVQALEFYKIDVDHLIVVCDDISLDAGKLRIRRKGSHGGHNGLRSICDL 141
Query: 136 ---NNFR----GIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
++++ G+G+ P D ++L KF E++ + + E LKL++ E
Sbjct: 142 TGRDDYQRIKMGVGKKPHPDYDLAKWVLGKFGKEDAEKMKQSAENACECLKLMVQGKTDE 201
Query: 188 SARHFNT 194
+ +N+
Sbjct: 202 AMNKYNS 208
>gi|158522829|ref|YP_001530699.1| aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
gi|158511655|gb|ABW68622.1| Aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
Length = 193
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 9/182 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
P+L GLGNPG Y TRHN+GF +ID AE +++ +G G + V+
Sbjct: 4 TEPYLLAGLGNPGSDYARTRHNIGFMVIDRLAERFSFAIDRTKGSCLYGTGGIEGQRVVA 63
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KPQ +MN SG LA Y K+ R+LV HDD+ L G L+++ GGHGGHNG+KS++
Sbjct: 64 VKPQGFMNSSGPPLFRLAQYLKISSKRMLVVHDDIDLAFGKLKIKTKGGHGGHNGIKSII 123
Query: 136 NNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ F GI P + +L +F+A E +D +Q+ E + +L +G T
Sbjct: 124 DTFGTDDFVRVRIGIDHPGAREGVVGHVLGRFSAEELEHLDGLIQQAGETVTAILKEGAT 183
Query: 187 ES 188
+
Sbjct: 184 AA 185
>gi|255659622|ref|ZP_05405031.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
gi|260848183|gb|EEX68190.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
Length = 216
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 11/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
+ GLGNPG +Y T+HNVGF IDA A++ G+S + K A +G V+L K
Sbjct: 3 IIAGLGNPGAEYAKTKHNVGFMFIDALADALGLSASDWKDKFEAKVADARIGTEKVVLVK 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMN SG + GPL +YKL ++V HDDM +P G +R+R G GGHNG+KS++ +
Sbjct: 63 PQTYMNESGRAVGPLMNWYKLAPEDLIVVHDDMDIPAGTIRIRKKGSAGGHNGIKSILAH 122
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRP +L F + +I A+ + ++ +++ + +
Sbjct: 123 VGDEHFARVRIGIGRPLPGWTVVNHVLAGFPEEEQPKIREAIDYLIPAVECIVTHDVDMA 182
Query: 189 ARHFN 193
FN
Sbjct: 183 MNQFN 187
>gi|443674200|ref|ZP_21139237.1| Peptidyl-tRNA hydrolase [Rhodococcus sp. AW25M09]
gi|443413212|emb|CCQ17576.1| Peptidyl-tRNA hydrolase [Rhodococcus sp. AW25M09]
Length = 201
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 13/185 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG--QGFVGDAPVLL 75
P L VGLGNPG +Y+ TRHNVGF + DA A G + ++ H K+ Q +G V++
Sbjct: 14 PALIVGLGNPGPQYEKTRHNVGFMVADALAGRIGGAFSS-HKKSNSDVVQARLGSRSVVI 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP+T+MNLSG+ LA ++ + ++V HD++ + G LRL+ GG GGHNGL+S+
Sbjct: 73 AKPRTFMNLSGQPVAALARFFSIDPANIVVVHDELDIDFGSLRLKLGGGEGGHNGLRSIS 132
Query: 136 NNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ G+GRPPG+MDP +F+L+ F+A R+ + ++E + +LLLS GL
Sbjct: 133 QHLSTKDYLRVRVGVGRPPGRMDPASFVLKPFSAPERKDLGVVVEEAADAAELLLSAGL- 191
Query: 187 ESARH 191
E+A++
Sbjct: 192 ETAQN 196
>gi|392531775|ref|ZP_10278912.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum ATCC 35586]
gi|414082571|ref|YP_006991271.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum LMA28]
gi|412996147|emb|CCO09956.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum LMA28]
Length = 189
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY T+HN+GF +D A + N A + + F+G VLL KPQ
Sbjct: 3 IIVGLGNPGAKYTATKHNIGFITMDEMAFQHKLQFNKSKFDAVYAEAFIGTEKVLLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG++ PL YY L + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TFMNDSGQAVRPLMDYYDLGIEDLVVVYDDLDLPVGKIRLRQKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTES 188
N R GI RP PGQ +L F E I A+++ E L + E+
Sbjct: 123 TSDFNRIRIGIDRPFPGQT-VINHVLGAFPKEHHEDILFAVKDAAEALNYWIEGHTFLET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|374307674|ref|YP_005054105.1| aminoacyl-tRNA hydrolase [Filifactor alocis ATCC 35896]
gi|291166312|gb|EFE28358.1| aminoacyl-tRNA hydrolase [Filifactor alocis ATCC 35896]
Length = 186
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 80/117 (68%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHN+GF ID + GI N + KA+ G+G +G V+L KP
Sbjct: 2 YIIVGLGNPGKKYERTRHNIGFLTIDELSRRTGIIPNKLKFKASVGEGRIGTEKVVLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
QT+MNLSGES L ++YK+ ++++V +DD+ L G LR+R G G HNG+++++
Sbjct: 62 QTFMNLSGESVRELMSFYKVDHDKLIVIYDDIDLEVGKLRIRKKGSSGTHNGMRNII 118
>gi|392963302|ref|ZP_10328728.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans DSM 17108]
gi|392451126|gb|EIW28120.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans DSM 17108]
Length = 185
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GF ++D A+ GI +A + + G+ +LL KPQ
Sbjct: 3 IVVGLGNPGQQYSATRHNIGFMVVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + G LA +YK+ + +++ DDM LP G LRLR GG GGH G++S++ +
Sbjct: 62 TYMNLSGVAVGELARWYKVAVEDIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHLS 121
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPP ++L F A + + +A+++ + + +L +G+ ++
Sbjct: 122 KDSFPRVRVGIGRPPAGWQVVDYVLSSFTAEEQPLVKSAIEKAADATESILEQGMNKA 179
>gi|149177253|ref|ZP_01855859.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
gi|148843967|gb|EDL58324.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
Length = 189
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 94/185 (50%), Gaps = 10/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ TRHNVGFE++ AE G + +A + G VLL PQ
Sbjct: 3 VVVGLGNPGKKYERTRHNVGFEVLSQLAEWHGAPGSRSQFEAEVTEISCGGDKVLLVAPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S +A ++KLP V+V DDM LP G LRLR +G GG GL+ ++
Sbjct: 63 TFMNLSGRSVAAVAKFFKLPATDVMVVCDDMNLPVGRLRLRGSGSAGGQKGLQDIIQKLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIAR-ERIDTALQEGVEVLKLLLSKGLTESA 189
G+GRPP ++L +F E I TA+ ++ + GL +
Sbjct: 123 TQDVPRLRVGVGRPPAGFSAADYVLGRFQGKQEFELIATAVDNAARGIECWVQSGLEMAM 182
Query: 190 RHFNT 194
N
Sbjct: 183 NQVNA 187
>gi|229551615|ref|ZP_04440340.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|258509517|ref|YP_003172268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|258540717|ref|YP_003175216.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|385829140|ref|YP_005866912.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|385836346|ref|YP_005874121.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 8530]
gi|229315019|gb|EEN80992.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|257149444|emb|CAR88417.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|257152393|emb|CAR91365.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|259650785|dbj|BAI42947.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|355395838|gb|AER65268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 8530]
Length = 185
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y GT+HN+GF ++D A+ G+++N + A V D V L KPQ
Sbjct: 3 MIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVHDEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
TYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 63 TYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 119
>gi|334128115|ref|ZP_08502014.1| aminoacyl-tRNA hydrolase [Centipeda periodontii DSM 2778]
gi|333388239|gb|EGK59421.1| aminoacyl-tRNA hydrolase [Centipeda periodontii DSM 2778]
Length = 212
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y T+HNVGF + DA A+ ++ + +G V L KP
Sbjct: 3 IIAGLGNPGADYAHTKHNVGFMLADALADRWNAPAWKEDFFSSVTEVRIGGEKVFLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGE+ GP+ +YYK+ ++ + V HDDM +P G +R+R G GGHNG+KS++
Sbjct: 63 TYMNNSGEALGPMLSYYKMDVDDLTVVHDDMDIPSGTVRIRRKGSSGGHNGIKSIIAHVG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F GIGRPP +L F+A +I A+ + ++ +++ G+ +
Sbjct: 123 SEDFARVRIGIGRPPAGWTVINHVLAPFSAEDAPKIRGAIDYLLPAVECIVTNGVDFAMN 182
Query: 191 HFNTIQK 197
H+N +K
Sbjct: 183 HYNPHKK 189
>gi|331268337|ref|YP_004394829.1| aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
gi|329124887|gb|AEB74832.1| Aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
Length = 186
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 10/181 (5%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTY 81
+GLGNPG +Y+ TRHNVGF+ I+ AE I N K +G G + V+L KP TY
Sbjct: 1 MGLGNPGKEYEHTRHNVGFDAIELLAEKYNIEFNRKKFKGMYGDGTIAGEKVILLKPLTY 60
Query: 82 MNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR-- 139
MNLSGES + +YK+ ++V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 MNLSGESVREVMDFYKITNEDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHLNTD 120
Query: 140 -------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHF 192
G+G P + + + +L KF +++ + +++++ KG E+ F
Sbjct: 121 HFPRVKVGVGHPV-KTNLVSHVLGKFEKEDECKLNKTFEAACNAVQIIIEKGTAEAMNKF 179
Query: 193 N 193
N
Sbjct: 180 N 180
>gi|223933456|ref|ZP_03625441.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|302023114|ref|ZP_07248325.1| peptidyl-tRNA hydrolase [Streptococcus suis 05HAS68]
gi|330831856|ref|YP_004400681.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|386583134|ref|YP_006079537.1| peptidyl-tRNA hydrolase [Streptococcus suis D9]
gi|223897894|gb|EEF64270.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|329306079|gb|AEB80495.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|353735280|gb|AER16289.1| peptidyl-tRNA hydrolase [Streptococcus suis D9]
Length = 189
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLA 76
L +GLGNPGD+Y T+HNVGF ++D A+ + ++ N H K A G F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFN--HDKIFQADIGTTFIDGEKIYLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP T+MN SG++ L AYY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 62 KPTTFMNESGKAVHALMAYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVK 121
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRP G+M +L F+ R ID AL + + + + L + +
Sbjct: 122 HIGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDTEDRIEIDLALDKLDKAVNVYLEEDDFD 181
Query: 188 SA-RHFN 193
+ R FN
Sbjct: 182 TVMRKFN 188
>gi|302380851|ref|ZP_07269314.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|417925593|ref|ZP_12569012.1| aminoacyl-tRNA hydrolase [Finegoldia magna SY403409CC001050417]
gi|302311346|gb|EFK93364.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|341591219|gb|EGS34427.1| aminoacyl-tRNA hydrolase [Finegoldia magna SY403409CC001050417]
Length = 189
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 97/172 (56%), Gaps = 12/172 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+G+ V+L KP
Sbjct: 2 YLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 62 STYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLI 121
Query: 136 --NNFRGIGRPPGQMDP---KAFLLQKFN----AIARERIDTALQEGVEVLK 178
+F I GQ D K F+L +F+ + + ID + +++++
Sbjct: 122 ESQDFARIKVSVGQNDKYDLKDFVLSQFSKNEFEVLEKEIDMSSDAAIKIVE 173
>gi|408790657|ref|ZP_11202272.1| Peptidyl-tRNA hydrolase [Lactobacillus florum 2F]
gi|408519998|gb|EKK20102.1| Peptidyl-tRNA hydrolase [Lactobacillus florum 2F]
Length = 185
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG+KY+ TRHN GF ++ FA++ I +N + A FG G + VLL +P
Sbjct: 3 MIVGLGNPGEKYQSTRHNTGFMALEDFAKAHQIELNQHNQNAQFGSGLLEGEKVLLVEPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
TYMN SG++ PL YYKL L+ ++V +DDM L G +RLR++G GGHNG+KS++
Sbjct: 63 TYMNESGQAVRPLLDYYKLSLDDLVVVYDDMDLHVGRIRLRNHGSSGGHNGIKSLI 118
>gi|451335537|ref|ZP_21906104.1| Peptidyl-tRNA hydrolase [Amycolatopsis azurea DSM 43854]
gi|449421942|gb|EMD27333.1| Peptidyl-tRNA hydrolase [Amycolatopsis azurea DSM 43854]
Length = 198
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y G RHNVGF ++D A G A +G + V+L KP+
Sbjct: 14 LLAGLGNPGPQYAGNRHNVGFMVLDELAGRVGGKFKAHKSGAEVLEGRLSGQRVVLVKPR 73
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
+YMNLSG A ++K+P V+V HD++ + G L+++ GG GHNGL+S+ +
Sbjct: 74 SYMNLSGGPVVGAARFFKIPPAGVVVVHDELDVDFGALKMKLGGGDNGHNGLRSITKSLG 133
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+GRPPG+ DP F+L+ F+ + R+ + + + ++ L+S GL +
Sbjct: 134 TKDYYRVRFGVGRPPGRQDPADFVLKDFSTVERKELAFEIDRCADAVEALISTGLVAAQN 193
Query: 191 HFNT 194
F+
Sbjct: 194 TFHA 197
>gi|68536582|ref|YP_251287.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|260577725|ref|ZP_05845660.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
gi|119390905|sp|Q4JU38.1|PTH2_CORJK RecName: Full=Peptidyl-tRNA hydrolase 2; Short=PTH 2
gi|68264181|emb|CAI37669.1| pthB [Corynebacterium jeikeium K411]
gi|258604120|gb|EEW17362.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
Length = 240
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 7 LRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQ 65
L G A W+ +GLGNPG KY TRHN+G+ ID E V KA
Sbjct: 36 LTVGELQEFAPEWIVIGLGNPGAKYADTRHNIGYWPIDRLVERYEAQWLPVEGQKAHAAL 95
Query: 66 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
V + PVLL + TYMN SGE+ GPLA+ LP R++V HD++ + G +R++ GG
Sbjct: 96 ITVEETPVLLLRSTTYMNNSGEAVGPLASALSLPAERIIVCHDELDIAAGQVRIKDKGGE 155
Query: 126 GGHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNA--IARER--IDTALQE 172
GGHNGL+S+ GIGRPP F+L F I E ++ L++
Sbjct: 156 GGHNGLRSMTAELGTQHYVRVRMGIGRPPKGTSVIDFVLSPFEEADIDAENGWMENTLRD 215
Query: 173 GVEVLKLLLSKGLTESARHFNTIQKYKH 200
V+ + L+++ G T+ AR N I KH
Sbjct: 216 SVDSVTLIVNNG-TDIAR--NDIHTRKH 240
>gi|383827088|ref|ZP_09982203.1| peptidyl-tRNA hydrolase [Mycobacterium xenopi RIVM700367]
gi|383331666|gb|EID10162.1| peptidyl-tRNA hydrolase [Mycobacterium xenopi RIVM700367]
Length = 191
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 107/186 (57%), Gaps = 14/186 (7%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT---VHCKATFGQGFVGDA 71
+A P L VGLGNPG Y TRHN+G+ + D A G + C+ GQ +G
Sbjct: 1 MAEPLLAVGLGNPGPNYARTRHNLGYMVADRLAARLGSTFKAHKKSGCEIVTGQ--LGGR 58
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP++YMN SG PLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 SVVLAKPRSYMNESGRQVAPLAKFYSVPPADIIVIHDDLDLDFGRIRLKLGGGEGGHNGL 118
Query: 132 KSV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+SV +F+ GIGRPPG+ DP AF+L+ F A R + T ++ + +LL+
Sbjct: 119 RSVAAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTAAERAEVPTICEQAADATELLIE 178
Query: 183 KGLTES 188
GL +
Sbjct: 179 LGLEAA 184
>gi|406837953|ref|ZP_11097547.1| peptidyl-tRNA hydrolase [Lactobacillus vini DSM 20605]
Length = 189
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGN G +Y+GTRHN GF ++D A+ G++ +A + +LLAKP
Sbjct: 3 LVVGLGNIGKEYEGTRHNTGFMVLDHLAQQAGLTFTGPRQEAMIAKDHCYQQTILLAKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG S L YY L N +LV HDD+ LP G LRLR G GGHNG+KS++
Sbjct: 63 TYMNESGRSVRALLNYYDLEPNDLLVVHDDLDLPTGQLRLRQKGSAGGHNGIKSIIAAVN 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTESA 189
NF+ GI P Q ++L +F+A + I + + + ++ L + ++
Sbjct: 123 GQNFKRIRIGIDHPNKQT-VVDWVLSRFDAQQHDLITQGIDQAIAAIRFWLETDDFNQAM 181
Query: 190 RHFNTIQK 197
FN +K
Sbjct: 182 NRFNHKEK 189
>gi|296140893|ref|YP_003648136.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
gi|296029027|gb|ADG79797.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
Length = 194
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 15/194 (7%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVL 74
RP + VGLGNPG+KY GTRHN+GF+++D A S + H K A + PV
Sbjct: 4 RPLIVVGLGNPGEKYAGTRHNIGFDVVDELATRARTSFSR-HKKSGAEVAGARLAGRPVY 62
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAKPQ++MNLSG+ LA +Y + V+ HD++ + G++RL+ GG GGHNGL+S+
Sbjct: 63 LAKPQSFMNLSGQPVSALARFYSVEPTDVIAVHDELDIDFGLVRLKRGGGEGGHNGLRSL 122
Query: 135 MNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+ DP ++L+ F + R + + + ++LL+S+ L
Sbjct: 123 TQHLGTKDYLRVRAGIGRPPGRQDPADYVLKPFASAERTEVPLLVTNAADAVELLISRDL 182
Query: 186 T-ESARHFNTIQKY 198
ESA+ NT+ +
Sbjct: 183 DLESAQ--NTVHAW 194
>gi|292670806|ref|ZP_06604232.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|422343852|ref|ZP_16424779.1| peptidyl-tRNA hydrolase [Selenomonas noxia F0398]
gi|292647427|gb|EFF65399.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|355378268|gb|EHG25459.1| peptidyl-tRNA hydrolase [Selenomonas noxia F0398]
Length = 211
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 101/191 (52%), Gaps = 17/191 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG----QGFVGDAPVLL 75
+ GLGNPG +Y T+HNVGF ++DA A +N + F + +G V L
Sbjct: 3 IIAGLGNPGAEYAKTKHNVGFMLMDALA----AHLNAASWREAFHSLVLEVRIGGEKVFL 58
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SGE+ GP+ +YYKL ++V HDDM +P G +R+R GG GGHNG+KS++
Sbjct: 59 VKPLTYMNNSGEALGPMLSYYKLDTEDLVVAHDDMDIPAGTVRIRKKGGSGGHNGIKSII 118
Query: 136 -----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
NF GIGRPP +L F+A RI A+ + ++ + G
Sbjct: 119 AHVGSENFARVRIGIGRPPAGWSVINHVLAPFSAEDVPRIREAIDYLLPAMECIAQDGTD 178
Query: 187 ESARHFNTIQK 197
+ +N +K
Sbjct: 179 LAMNRYNPHKK 189
>gi|295106616|emb|CBL04159.1| peptidyl-tRNA hydrolase [Gordonibacter pamelaeae 7-10-1-b]
Length = 185
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG++Y TRHN GF+ +DA A G C + +G D ++LAKP
Sbjct: 2 YLIVGLGNPGEEYAHTRHNAGFDAVDAIAGEVGARYWKTECGSLTAKGAYRDVDLVLAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
Q+YMN SG L Y + ++V HD++ + G +R++ GGH GHNGL+S+ +
Sbjct: 62 QSYMNTSGGPVKQLMNAYGVDAEHLIVIHDELDIDPGTVRVKFGGGHAGHNGLRSICDKL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPPG+M ++L A + A+ G + L++ GL ++
Sbjct: 122 GTRDWSRVRVGIGRPPGRMPVVDWVLSLPKKEAADDFAYAVDRGAQAALSLVTAGLEKTQ 181
Query: 190 RHFN 193
+ +N
Sbjct: 182 QAYN 185
>gi|421056860|ref|ZP_15519777.1| peptidyl-tRNA hydrolase [Pelosinus fermentans B4]
gi|421057209|ref|ZP_15520081.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans B3]
gi|421064964|ref|ZP_15526779.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A12]
gi|421069319|ref|ZP_15530491.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A11]
gi|392438040|gb|EIW15902.1| peptidyl-tRNA hydrolase [Pelosinus fermentans B4]
gi|392450339|gb|EIW27392.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A11]
gi|392459996|gb|EIW36351.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A12]
gi|392463575|gb|EIW39493.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans B3]
Length = 185
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN+GF ++D A+ GI +A + + G+ +LL KPQ
Sbjct: 3 IVVGLGNPGRQYSATRHNIGFMVVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + G LA +YK+ + +++ DDM LP G LRLR GG GGH G++S++ +
Sbjct: 62 TYMNLSGVAVGELARWYKVAVEDIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHLS 121
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPP ++L F A + + +A+++ + + +L +G+ ++
Sbjct: 122 KDSFPRVRVGIGRPPAGWQVVDYVLSSFTAEEQPLVKSAIEKAADATESILEQGMNKA 179
>gi|347757712|ref|YP_004865274.1| peptidyl-tRNA hydrolase [Micavibrio aeruginosavorus ARL-13]
gi|347590230|gb|AEP09272.1| peptidyl-tRNA hydrolase [Micavibrio aeruginosavorus ARL-13]
Length = 196
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG KY RHN+GF IDA A+ G + +G +G V L KP
Sbjct: 2 WLLVGLGNPGQKYADNRHNIGFMAIDAIADKHGFPDFRTKFQGLLTEGRIGGEKVALLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMN SG + G A ++K+ NR++VFHD++ L LR++ GGH GHNGL+S+ ++
Sbjct: 62 QTYMNESGMAVGAAAKFFKVTPNRIVVFHDELDLAASKLRIKVGGGHAGHNGLRSIDSHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
GIG P + +L F+ ++ +D ++ + + L+LS
Sbjct: 122 GRADYMRVRLGIGHPGDKDRVHGHVLGDFSKEEQKWVDAMMKSIPDHVGLILS 174
>gi|332711589|ref|ZP_08431520.1| peptidyl-tRNA hydrolase [Moorea producens 3L]
gi|332349567|gb|EGJ29176.1| peptidyl-tRNA hydrolase [Moorea producens 3L]
Length = 214
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 105/187 (56%), Gaps = 11/187 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGF-VGDAPVLL 75
P L VGLGNP KY TRHN+GFE++DA A IS + + FGQG + + L
Sbjct: 13 PQLIVGLGNPEPKYDKTRHNIGFEVVDAIAGRLQISGSEHRRFQGWFGQGIGLKGNKLSL 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG++ + +YKL VL+ +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 73 LKPLTYMNRSGQAIRAVTDWYKLKPESVLIIYDDMDLPVGRLRLRLSGSAGGHNGMKSAI 132
Query: 136 -----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
NF GIG+ + D + +L KF+ E + +Q VE ++L L +G+
Sbjct: 133 AHLGTQNFPRLRIGIGKSSQKPDTISHVLGKFSPQEAELMSEVVQLAVEAVELSLKQGVE 192
Query: 187 ESARHFN 193
++ +N
Sbjct: 193 KAMSLYN 199
>gi|358067113|ref|ZP_09153597.1| peptidyl-tRNA hydrolase [Johnsonella ignava ATCC 51276]
gi|356694755|gb|EHI56412.1| peptidyl-tRNA hydrolase [Johnsonella ignava ATCC 51276]
Length = 195
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG Y+ TRHN GF+ ID A I +N V K+ G GF+G+ VLL KPQ
Sbjct: 3 IIAGLGNPGRGYENTRHNAGFDAIDRLAFKYEIPLNEVKHKSICGSGFMGNERVLLMKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGE+ YYKL + ++V DD+ L G +R+R G GGHNG++S++
Sbjct: 63 TYMNRSGEAIAKALHYYKLKPSDLIVVFDDVNLMPGQIRVRLRGSSGGHNGMRSIIYCIS 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N F GIG+ G+ ++L KF +D A V ++LL+S E+ R
Sbjct: 123 GNVFARVKIGIGKEDGKT-LSGYVLGKFTRAESVLLDEAYSNAVSAIELLIS---GEADR 178
Query: 191 HFNTIQK 197
N K
Sbjct: 179 AMNVFNK 185
>gi|298490956|ref|YP_003721133.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
gi|298232874|gb|ADI64010.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
Length = 209
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLL 75
P L VGLGNP KY+ TRHN+GF IDA + I + + FG+G G + L
Sbjct: 13 PQLIVGLGNPEPKYEQTRHNIGFTAIDALSRPWQIPLAENRKFQGQFGEGTAPGGGKIGL 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG S + ++YKLP VLV +DDM LP G RLR +G GGHNG+KS++
Sbjct: 73 LKPLTYMNRSGHSVQAVRSWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSII 132
Query: 136 NNFR---------GIGRPPG-----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
++ GIG+P G D + +L +F+A + + L+ +E ++L L
Sbjct: 133 SHLSSQNFPRLKIGIGKPKGAANEDNTDTVSHVLGRFSATETKLMTLVLEFVIECVELTL 192
Query: 182 SKGLTESARHFNT 194
+G+ ++ N+
Sbjct: 193 KQGVEKAMNCCNS 205
>gi|373859319|ref|ZP_09602049.1| peptidyl-tRNA hydrolase [Bacillus sp. 1NLA3E]
gi|372450988|gb|EHP24469.1| peptidyl-tRNA hydrolase [Bacillus sp. 1NLA3E]
Length = 186
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF +I+ +E I ++ K FG G V +LL KP
Sbjct: 3 LIVGLGNPGKQYENTRHNIGFLVIEKLSEQLNIRLDQAKFKGIFGMGNVEGEKILLLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSGES + YY++ + ++V +DD+ LP G +RLR G GGHNG+KS +
Sbjct: 63 TFMNLSGESIRVVMDYYQVQIEDLVVIYDDLDLPVGRIRLRQQGSAGGHNGIKSTIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
NF GI RP + ++L +F R ++ + + + L + +
Sbjct: 123 TQNFNRIRVGIDRPRTGTNVADYVLGRFTKDERVLMEDVIVKCSGACEQWLKRPFLQVMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 EFNV 186
>gi|429736222|ref|ZP_19270137.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429155820|gb|EKX98469.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 209
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 17/191 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF----VGDAPVLL 75
+ GLGNPG +Y T+HNVGF ++DA AE +N K F +G V L
Sbjct: 3 MIAGLGNPGAEYAQTKHNVGFMLVDALAER----LNAPAWKEDFFSAVTEVRIGGEKVFL 58
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SGE+ GP+ +YYK+ + + V HDDM +P G +R+R G GGHNG+KS++
Sbjct: 59 VKPLTYMNNSGEAIGPMLSYYKMAADDLTVVHDDMDIPAGTVRIRKKGSSGGHNGIKSII 118
Query: 136 -----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
NF GIGRPP +L F A +I A+ + ++ +++ G+
Sbjct: 119 AHVGGENFARVRIGIGRPPAGWTVINHVLSPFLAEDVPKIREAISYLLPAVECIVTDGVD 178
Query: 187 ESARHFNTIQK 197
+N +K
Sbjct: 179 LVMNRYNPHKK 189
>gi|404214056|ref|YP_006668250.1| Peptidyl-tRNA hydrolase [Gordonia sp. KTR9]
gi|403644855|gb|AFR48095.1| Peptidyl-tRNA hydrolase [Gordonia sp. KTR9]
Length = 186
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 113/190 (59%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
+ VGLGNPG +Y+ TRHNVG + D S G VH K A + +G PVL+AK
Sbjct: 1 MIVGLGNPGSRYEKTRHNVGAMVADGLVASAGARWK-VHKKSGAEVAEVRLGGQPVLVAK 59
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+TYMN SG GPLA +Y + ++ ++V HD++ + G +RL+ GG GGHNGL+S+
Sbjct: 60 PRTYMNESGRQIGPLAKFYSVSVDDLIVVHDELDIDFGAVRLKRGGGEGGHNGLRSLSQA 119
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F + AR ++ + G + ++LL+ + L ES
Sbjct: 120 LGTRDYLRVRIGIGRPPGRQDPADFVLKPFPSSARSEVELLIANGCDAVELLVGQDL-ES 178
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 179 AQ--NTVHAW 186
>gi|408355419|ref|YP_006843950.1| peptidyl-tRNA hydrolase [Amphibacillus xylanus NBRC 15112]
gi|407726190|dbj|BAM46188.1| peptidyl-tRNA hydrolase [Amphibacillus xylanus NBRC 15112]
Length = 186
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG KY+ TRHNVGF +ID G S++ + + V+L +PQT
Sbjct: 5 IVGLGNPGRKYQKTRHNVGFMVIDELLNRHGWSLDKKKFNGHYCLESLHGEKVVLLQPQT 64
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSG+S PL +Y++ +++LV +DD+ LP G +RLR GGHGGHNG++S++
Sbjct: 65 YMNLSGDSVKPLLDFYQIEPSQLLVIYDDLDLPIGKVRLRQTGGHGGHNGMRSIIQTVGT 124
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
N R GI RP + ++L KF+ + ++ + + + K +
Sbjct: 125 KQFNRIRIGIDRPQTGITVTDYVLGKFSKAENGLVSDSISIAADACEAWMDKPFLDVMNA 184
Query: 192 FN 193
+N
Sbjct: 185 YN 186
>gi|402311684|ref|ZP_10830620.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium ICM7]
gi|400371208|gb|EJP24172.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium ICM7]
Length = 209
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ ++
Sbjct: 18 SKMKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDISERKYKGLFAKVRIGNEKAII 77
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
+PQTYMN SGES Y+K+ V+V +DD+ L G LR+R G GGHNG+KS++
Sbjct: 78 LEPQTYMNNSGESVRAFMDYFKIEAADVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSLI 137
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ G+G P +MD +L +F ++ +D A + +E +KL++
Sbjct: 138 AHMGTSDFPRVKVGVGEKPAKMDLADHVLGRFGDTDKKLLDEAASDAIEAIKLMVEGQYD 197
Query: 187 ESARHFNT 194
+ +NT
Sbjct: 198 TAMNRYNT 205
>gi|411119817|ref|ZP_11392193.1| peptidyl-tRNA hydrolase [Oscillatoriales cyanobacterium JSC-12]
gi|410709973|gb|EKQ67484.1| peptidyl-tRNA hydrolase [Oscillatoriales cyanobacterium JSC-12]
Length = 216
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 106/192 (55%), Gaps = 14/192 (7%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFV-GDAPVL 74
+P L VGLGNPG KY TRHN+GF+++D A+ IS++ FG+G G +
Sbjct: 17 KPQLIVGLGNPGAKYDRTRHNIGFDVVDLLAQYWHISLSEQKKFHGIFGEGIAPGAQKIR 76
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KPQT+MN SG++ + +YKLP VLV +DDM LP G LR+R +G GGHNG+KS
Sbjct: 77 LLKPQTFMNNSGQAMRAVVDWYKLPPESVLVIYDDMDLPIGKLRMRLSGSAGGHNGMKSA 136
Query: 135 MNNF---------RGIGRP---PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+ + GIG G D + +L KF + + +Q + ++ L+
Sbjct: 137 IAHLGTQHFPRLRIGIGSAKAEKGDKDTISHVLGKFAPMEAAMMTEVVQLAADAIECSLT 196
Query: 183 KGLTESARHFNT 194
+G+ ++ +N+
Sbjct: 197 QGIAKAMSLYNS 208
>gi|227509304|ref|ZP_03939353.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227191234|gb|EEI71301.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 189
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 9/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y GTRHN GF +++ FA+ GIS+ T A G FV VL+ +P
Sbjct: 6 MIVGLGNIGPQYDGTRHNTGFMVVEEFAKKHGISIKTRKMNAKMGSAFVNGQKVLVVEPT 65
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG + PL +Y+++ V+V HDDM LP G +R++ G GGHNG+KS++NN
Sbjct: 66 TFMNDSGIAVKPLMSYFEIENKDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNLG 125
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
GI P ++L +F+ A V L+ L
Sbjct: 126 TEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|416381169|ref|ZP_11684175.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 0003]
gi|357265569|gb|EHJ14318.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 0003]
Length = 204
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 11/188 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLL 75
P L VGLGNP KY TRHN+GFE++D AE+ +S T + +G + L
Sbjct: 12 PQLIVGLGNPEPKYDKTRHNIGFEIVDILAETWQLSWKETRRFQGMIAEGNSRNQQKIYL 71
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + +YKL VLV +DDM LP G LR+R +G GGHNG+KS++
Sbjct: 72 LKPSTYMNRSGQSVRAVTDWYKLESENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSII 131
Query: 136 N-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ NF GIG+ + + +L +F+ R+ ID V+ ++ L +G+
Sbjct: 132 SHLGGQNFPRLRIGIGKSNQVDNTISHVLGRFSPEERKIIDKTYPLVVDAIETTLKEGVE 191
Query: 187 ESARHFNT 194
++ FN+
Sbjct: 192 KAMSQFNS 199
>gi|297587542|ref|ZP_06946186.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
gi|297574231|gb|EFH92951.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
Length = 190
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 13/173 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+G+ V+L KP
Sbjct: 2 YLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 62 STYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYLI 121
Query: 136 --NNFRGIGRPPGQ----MDPKAFLLQKFN----AIARERIDTALQEGVEVLK 178
+F I GQ D K F+L +F+ + ++ ID + +++++
Sbjct: 122 QSQDFARIKVSVGQNDNNYDLKDFVLSQFSKKEFEVLKKEIDMSSDACIKIVE 174
>gi|239825632|ref|YP_002948256.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
gi|259535195|sp|C5D374.1|PTH_GEOSW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239805925|gb|ACS22990.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
Length = 186
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y+ TRHN GF +ID A+ IS T + V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHNAGFMVIDELAKRWNISFQTTKFHGMMASTVIFGEKVALCKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGECVRPLMDYYHIDVDDVIVIYDDLDLPPGKIRLRMKGSSGGHNGIKSLIHHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP ++L +F + + A+ + + + +
Sbjct: 123 TQEFKRVRIGIGRPANGQKITDYVLGRFTKEESDAVMEAILRAADACEKAVVTPFLQVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 EFN 185
>gi|375090113|ref|ZP_09736432.1| peptidyl-tRNA hydrolase [Facklamia languida CCUG 37842]
gi|374566006|gb|EHR37261.1| peptidyl-tRNA hydrolase [Facklamia languida CCUG 37842]
Length = 189
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 9/171 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG+KY+GTRHNVGFE++D Q I M +A VLL KP T
Sbjct: 4 IVGLGNPGEKYQGTRHNVGFEVVDQLLSDQKIQMTNQKFQADTAIWHTQGERVLLVKPFT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMN SG++ PL +YY + ++V +DD+ L G LRLR G GGHNG+KS++
Sbjct: 64 YMNASGQAVLPLMSYYGVASEDLVVVYDDLDLIPGRLRLRLKGSAGGHNGMKSIIELLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+F+ GIGRP G + +L F+ ++ +D A+ + L+ ++
Sbjct: 124 QDFKRIRVGIGRPQGGWKVRDHVLAPFDRDSQPLVDDAVGRASQALQAWVA 174
>gi|434405779|ref|YP_007148664.1| peptidyl-tRNA hydrolase [Cylindrospermum stagnale PCC 7417]
gi|428260034|gb|AFZ25984.1| peptidyl-tRNA hydrolase [Cylindrospermum stagnale PCC 7417]
Length = 213
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 16/197 (8%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDA 71
A+ P L VGLGNP KY TRHN+GF +DA + S + + + +G+G G
Sbjct: 9 ALVIPQLIVGLGNPEPKYDQTRHNIGFAALDALSRSWKMPLAENRKFQGEYGEGMAPGGG 68
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V L KP TYMN SG+S + ++YKLP VLV +DDM LP G RLR +G GGHNG+
Sbjct: 69 KVRLLKPLTYMNRSGQSIQAVTSWYKLPAESVLVIYDDMDLPLGKTRLRLSGSAGGHNGM 128
Query: 132 KSVMNNFR---------GIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVEVL 177
KS + + GIG+P G + + +L +F+ + + LQ VE +
Sbjct: 129 KSTIAHLSSQDFPRLRIGIGKPKGAANSDDSETVSHVLGRFSGAETKLMSLVLQFVVECV 188
Query: 178 KLLLSKGLTESARHFNT 194
+L L +G+ ++ N+
Sbjct: 189 ELSLKQGVEKAMNRCNS 205
>gi|91204544|emb|CAJ70772.1| similar to peptidyl-tRNA hydrolase [Candidatus Kuenenia
stuttgartiensis]
Length = 186
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 101/185 (54%), Gaps = 14/185 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
+ VGLGNPG+KY TRHN+GF +ID F SQ + M V K + F + V ++L K
Sbjct: 5 MIVGLGNPGEKYLRTRHNLGFMVIDEF--SQQLEMGGVQHKFQSLFCKKEVEHEEIILLK 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQT+MNLSG + +A YK V+V DD+ LP G LR+R +GG GGH GL+SV ++
Sbjct: 63 PQTFMNLSGIAVQEVANMYKCQPRDVMVVCDDLDLPLGKLRIRRSGGCGGHRGLESVASS 122
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRP D F+L F+A I +LQE + LK + KG+
Sbjct: 123 LGTADFPRLRIGIGRPKFN-DTSRFVLSMFSAEEDVEIAKSLQEACKALKTWVYKGIESC 181
Query: 189 ARHFN 193
N
Sbjct: 182 MNENN 186
>gi|403250962|ref|ZP_10917341.1| peptidyl-tRNA hydrolase [actinobacterium SCGC AAA027-L06]
gi|402915761|gb|EJX36705.1| peptidyl-tRNA hydrolase [actinobacterium SCGC AAA027-L06]
Length = 187
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 11/189 (5%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 74
+A WL +GLGNPG +Y+ TRHN+G ++D SQG +T + + ++
Sbjct: 1 MADRWLVIGLGNPGPEYENTRHNIGQLVVDEL--SQGEKFSTHKSRMQICEIKHQGQALV 58
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAK + YMN +G L+ +YK+ +++++V HD++ LP LR++ GG GHNGLKS+
Sbjct: 59 LAKSRGYMNETGGPAKALSDFYKIEVSKIIVVHDELDLPFNSLRIKLGGGDNGHNGLKSL 118
Query: 135 MNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+++ GIGRP G+ DP F+L+ F+ R+ + G + ++ L+ G+
Sbjct: 119 TSSYSTSDYYRIRMGIGRPIGEQDPADFVLKPFSKEERKELQEFNSRGAQAIQSLVVNGM 178
Query: 186 TESARHFNT 194
++ FN+
Sbjct: 179 DKAQTAFNS 187
>gi|352518631|ref|YP_004887948.1| peptidyl-tRNA hydrolase [Tetragenococcus halophilus NBRC 12172]
gi|348602738|dbj|BAK95784.1| peptidyl-tRNA hydrolase [Tetragenococcus halophilus NBRC 12172]
Length = 186
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 99/187 (52%), Gaps = 16/187 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HNVGF ++ A++ ++ +A FV +LL KPQ
Sbjct: 3 MIVGLGNPGKKYENTKHNVGFMTVERLAKTHEVTFKKNPFEAEVADFFVNGEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG + GPL Y+ + ++V HDD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNDSGRAVGPLMTYFGIYKEELIVVHDDLDLTVGKIRLRQKGSAGGHNGIKSIISHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLKLLLSKGLT 186
GIG P +LQ FN A+ E ID A +E ++ + + T
Sbjct: 123 SNEFGRLKIGIGHPQEHTTVVNHVLQPFNKQQQAVMTESIDKA-KEAIDY--FIETNNFT 179
Query: 187 ESARHFN 193
+ FN
Sbjct: 180 QVMNRFN 186
>gi|427706338|ref|YP_007048715.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7107]
gi|427358843|gb|AFY41565.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7107]
Length = 212
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 18/202 (8%)
Query: 10 GFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQG-- 66
G A+ P L VGLGNP KY+ TRHN+GF +DA A + IS+ + +G+G
Sbjct: 5 GTQPALVIPQLIVGLGNPEPKYEQTRHNIGFAAVDALARAWQISVTENRKFQGEYGEGMA 64
Query: 67 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHG 126
F G+ + L KP TYMN SG++ + ++YKLP VL+ +DDM LP G RLR +G G
Sbjct: 65 FAGNK-IRLLKPLTYMNRSGQAIQSVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSAG 123
Query: 127 GHNGLKSVM-----NNFR----GIGRPP-----GQMDPKAFLLQKFNAIARERIDTALQE 172
GHNG+KS + NF GIG+P + + +L KF+A + + LQ
Sbjct: 124 GHNGMKSAIAHLNTQNFPRLRIGIGKPKDAANGDNSETVSHVLGKFSATETQLMSAVLQF 183
Query: 173 GVEVLKLLLSKGLTESARHFNT 194
V+ +++ L +G+ ++ N+
Sbjct: 184 VVDCVEMSLKQGVEKAMNRCNS 205
>gi|335424593|ref|ZP_08553601.1| peptidyl-tRNA hydrolase [Salinisphaera shabanensis E1L3A]
gi|334888931|gb|EGM27226.1| peptidyl-tRNA hydrolase [Salinisphaera shabanensis E1L3A]
Length = 196
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQT 80
V LGNPG + RHNVGF + D AE ++ ++ K + +G+A V L KP T
Sbjct: 9 VALGNPGADHASDRHNVGFWLADRLAERWRVAFSSERKFKGDLARRGMGEASVWLLKPAT 68
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----N 136
+MN SG++ PL A++KL VLV HD++ LP G R + +GGHGGHNGL+ +
Sbjct: 69 FMNRSGDAVQPLCAFHKLAPESVLVVHDELDLPAGTARFKQSGGHGGHNGLRDITRVIGT 128
Query: 137 NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHF 192
++ GIG P + +++L + R ID A+ G++ L++ L KG A+
Sbjct: 129 QYKRLRIGIGHPGDRSQVLSYVLGTPSPDDRIEIDNAIDAGIDALEIALDKGWDYGAQKL 188
Query: 193 NT 194
N+
Sbjct: 189 NS 190
>gi|227522402|ref|ZP_03952451.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
gi|227090460|gb|EEI25772.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
Length = 189
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 9/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y GTRHN GF +++ FA+ GIS+ T A G FV VL+ +P
Sbjct: 6 MIVGLGNIGPQYDGTRHNTGFMVVEEFAKKYGISIKTRKMNAKMGSAFVNGQKVLVVEPT 65
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG + PL +Y+++ V+V HDDM LP G +R++ G GGHNG+KS++NN
Sbjct: 66 TFMNDSGIAVKPLMSYFEIENKDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNLG 125
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
GI P ++L +F+ A V L+ L
Sbjct: 126 TEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|422735113|ref|ZP_16791393.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
gi|315168149|gb|EFU12166.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
Length = 188
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 99/185 (53%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ + + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSIGPLLTYFGVDVEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ES 188
GIGRP +L F E + A+++ + L +G T E+
Sbjct: 123 TNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|227501527|ref|ZP_03931576.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
gi|227077552|gb|EEI15515.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
Length = 177
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 12/176 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVLL 75
P L VGLGNPG KY GTRHN+GF++ D A + +S +VH K +G + V+
Sbjct: 3 PLLVVGLGNPGPKYSGTRHNIGFDVADELA-GELMSSFSVHKKTNTEVAEGMLSGRKVIC 61
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
AKP+++MNLSG LA Y+ L ++V HD++ G ++LR GG GHNGL+S
Sbjct: 62 AKPRSFMNLSGGPIKALAQYFHLAPADIVVVHDELEFDFGTVKLRQGGGDHGHNGLRSTT 121
Query: 136 NNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+ GIGRPPG+MDP +F+L+ ++ + I + V ++ L
Sbjct: 122 KSLGTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEKVEIPILCADAVAEIRSALD 177
>gi|290967809|ref|ZP_06559362.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
gi|290782168|gb|EFD94743.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
Length = 188
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ T+HN GF +DA A G A +LL KPQ
Sbjct: 1 MIVGLGNPGREYENTKHNTGFMTVDALAADMGADRWQQKMAALVASVSFRGETILLVKPQ 60
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + GPL +YKL +V + +DDM LP G LR+R +G GGHNG+KS+ N
Sbjct: 61 TYMNDSGRAVGPLMRWYKLAEPQVYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFANGC 120
Query: 138 -----FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
FR GIGRP Q +L F + V +K L G+ +
Sbjct: 121 TEFIRFRIGIGRPLPQWSVVDHVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKGMNR 180
Query: 192 FNTIQK 197
FN +K
Sbjct: 181 FNPKKK 186
>gi|392988401|ref|YP_006486994.1| peptidyl-tRNA hydrolase [Enterococcus hirae ATCC 9790]
gi|392335821|gb|AFM70103.1| peptidyl-tRNA hydrolase [Enterococcus hirae ATCC 9790]
Length = 186
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY T+HN+GF ++D AE Q +A + F +LL KPQ
Sbjct: 3 MIVGLGNPGTKYAQTKHNIGFMVVDRMAEKQQAVFKKNTFEAEVAEFFYQGEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYFGIYPEELVVVYDDLDLVTGKIRLRQKGSAGGHNGIKSIISHLN 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G +L F+ + I+ ++ + V L+ +L ++
Sbjct: 123 TNVFDRIKVGIGRPEGNKTVVQHVLSPFSKEVQPLIEASIDQSVAALEFMLDGHSFIDTM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NKFN 186
>gi|291286017|ref|YP_003502833.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
gi|290883177|gb|ADD66877.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
Length = 197
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG+KY TRHN+GF + D A S + K + + F+ + KP
Sbjct: 1 MLIVGLGNPGEKYDRTRHNLGFLVADKLASENSASFSK-GFKGEYAEFFMDGGKHYILKP 59
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES PLAAYYK+P+ ++ HDD+ + G L+L+ G GGH G++S+
Sbjct: 60 YTYMNLSGESVQPLAAYYKIPVEDIIAVHDDLDIEFGRLKLKKGGNDGGHKGIRSMAQML 119
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+ G+ D +L KF+ E++D + GV+ + + +GL +
Sbjct: 120 GDKDFIRLKMGIGK-DGRRDTIGHVLGKFSPQESEKLDEFIDIGVKAVVCCIKEGLRPAM 178
Query: 190 RHFNT 194
FNT
Sbjct: 179 NVFNT 183
>gi|402833543|ref|ZP_10882156.1| aminoacyl-tRNA hydrolase [Selenomonas sp. CM52]
gi|402280036|gb|EJU28806.1| aminoacyl-tRNA hydrolase [Selenomonas sp. CM52]
Length = 218
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 11/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y +HNVGF ++DA AE G+ A +G +G VLL KP
Sbjct: 3 IIAGLGNPGAEYARMKHNVGFMLVDALAERLGVDAWREKFNALVAEGRIGAQKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG + GPL +YKL ++V HDDM + G +RLR G GGHNG+KS++
Sbjct: 63 TYMNESGRAVGPLLDWYKLAPEDLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLAHIG 122
Query: 136 -NNFR----GIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+F GIGRP PG K +L F A +I A+ + ++ +++ G+ +
Sbjct: 123 SEDFSRVRIGIGRPLPGWTVVK-HVLAPFPAEDVLKIQEAISYLLPAVECIVTDGIDMAM 181
Query: 190 RHFNTIQK 197
+N +K
Sbjct: 182 NRYNPRRK 189
>gi|335049997|ref|ZP_08542978.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 199-6]
gi|333761904|gb|EGL39430.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 199-6]
Length = 190
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 92/186 (49%), Gaps = 8/186 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ T+HN GF +DA A G A +LL KPQ
Sbjct: 3 MIVGLGNPGREYENTKHNTGFMTVDALAADMGADRWQQKMAALVASVSFRGETILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + GPL +YKL +V + +DDM LP G LR+R +G GGHNG+KS+ N
Sbjct: 63 TYMNDSGRAVGPLMRWYKLAEPQVYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFANGC 122
Query: 138 -----FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
FR GIGRP Q +L F + V +K L G+ +
Sbjct: 123 TEFIRFRIGIGRPLPQWSVVDHVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKGMNR 182
Query: 192 FNTIQK 197
FN +K
Sbjct: 183 FNPKKK 188
>gi|333394473|ref|ZP_08476292.1| peptidyl-tRNA hydrolase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 188
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HNVGF ID A + ++ + +A + F D V L KPQ
Sbjct: 3 MIVGLGNPGKKYEQTKHNVGFMTIDRMAAAHQVTFSHNQFEANYATYFENDEKVYLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG + PL YY++ L ++V +DDM L G LRLR +G GGHNG+KS++
Sbjct: 63 TFMNDSGRAVKPLMTYYQIQLAELMVVYDDMDLVPGRLRLREHGSAGGHNGIKSLISFLQ 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
N R G G P + ++L F+ AR +D ++ +E L+
Sbjct: 123 TSDFNRVRIGTGHPE-RRSVVDWVLSPFSDEARPLVDRSIDTAIEALE 169
>gi|146296228|ref|YP_001179999.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|167011991|sp|A4XIS3.1|PTH_CALS8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145409804|gb|ABP66808.1| Aminoacyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 189
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG++Y TRHN GF ID A++ ++ + K G D VLL KP
Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SG+S +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 63 MTYMNSSGDSIVEAVNFYKVKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL 122
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P + D ++L +F +++I A+++ + +K+LL G+ +
Sbjct: 123 GTEEFPRIRIGIGVP--KEDMVKYVLSEFEDYEKQKIFRAIEKAAQGIKILLESGIDRAM 180
Query: 190 RHFN 193
+ N
Sbjct: 181 NYIN 184
>gi|320335350|ref|YP_004172061.1| peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
gi|319756639|gb|ADV68396.1| Peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
Length = 203
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHNVG+ ++D A G + A + +G VLL KPQ
Sbjct: 3 VVVGLGNPGAQYALTRHNVGWLVVDEVARRAGATWRK-DRDAEVTEVRLGTEKVLLVKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG + PL +YKL +LV DD+ P G+++ R G HGG NG++ ++
Sbjct: 62 TFMNSSGRAVAPLMTFYKLDGAHLLVVQDDLDSPFGLMKFRLGGRHGGQNGVRDIITRLG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GI RPP DP ++L K+ R +D ++ G ++ + GL E+
Sbjct: 122 TDAFPRLKLGISRPPTGWDPAGWVLSKWRDEERTTVDELVRLGANAVEAWATLGLLEAQA 181
Query: 191 HFN 193
FN
Sbjct: 182 RFN 184
>gi|453381134|dbj|GAC84239.1| peptidyl-tRNA hydrolase [Gordonia paraffinivorans NBRC 108238]
Length = 206
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 17/199 (8%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFV 68
+ T V + L VGLGNPG KY+ TRHNVG ++D A S G VH K A + +
Sbjct: 14 YSTRVVK--LIVGLGNPGPKYEKTRHNVGAMVVDGLASSAGERWK-VHKKSGAEVAEVRL 70
Query: 69 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
G PVLLAK + YMN SG GPLA +Y + ++V HD++ + G++RL+ GG GGH
Sbjct: 71 GGLPVLLAKARVYMNESGRQIGPLAKFYSVDPADLIVVHDELDIDFGLVRLKKGGGEGGH 130
Query: 129 NGLKSV---------MNNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
NGL+S+ + GIGRPPG+ DP F+L+ F A R ++ ++ G + ++L
Sbjct: 131 NGLRSISQVMGTKDYLRVRMGIGRPPGRQDPADFVLKPFPAADRAEVELLVRNGCDAVEL 190
Query: 180 LLSKGLTESARHFNTIQKY 198
L+++GL E+A+ NT+ +
Sbjct: 191 LVTQGL-EAAQ--NTVHAW 206
>gi|83588952|ref|YP_428961.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
gi|119390960|sp|Q2RMC1.1|PTH_MOOTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83571866|gb|ABC18418.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
Length = 190
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 104/184 (56%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHN GF ++D A+ GI+++ +A GQG VG+ VLL KPQ
Sbjct: 6 MVVGLGNPGPRYATTRHNAGFMVVDLLADDLGITLDRTREQALTGQGLVGNNRVLLVKPQ 65
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG++ PLA +Y + +LV HDD+ L G LRLR G GGH GL+S++ +
Sbjct: 66 TYMNNSGQAVAPLARWYGIAPEAILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIITHLG 125
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG-LTESA 189
GIGRPP + ++L+ F+ E I L E + LL G + E+
Sbjct: 126 TTAVPRLKIGIGRPPLGQNVIDYVLKPFSEGDWELIRPVLLEAARAARFLLEGGSMDEAM 185
Query: 190 RHFN 193
FN
Sbjct: 186 NRFN 189
>gi|373454831|ref|ZP_09546693.1| peptidyl-tRNA hydrolase [Dialister succinatiphilus YIT 11850]
gi|371935415|gb|EHO63162.1| peptidyl-tRNA hydrolase [Dialister succinatiphilus YIT 11850]
Length = 190
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG +Y+ TRHN+GF++ID A +++ KA GQ V VLL KP
Sbjct: 3 IIAGLGNPGKEYEHTRHNMGFDVIDELARRWHVTLWKEDMKAEIGQTLVNGEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGE+ G +A YYK+ L+ + + DD+ LP G R+R G GGHNG+KS++
Sbjct: 63 TYMNNSGEAVGAIARYYKVDLDDIYIICDDLDLPPGKTRIRKKGASGGHNGIKSLIAHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N FR G+G P +L + ++I+ A + ++ L G+ +
Sbjct: 123 SENFNRFRIGVGHPQDGHTVVEHVLSRPYGEDIQKIEDAKIHTADSIESALKDGVDHAMN 182
Query: 191 HFNTIQK 197
FN +K
Sbjct: 183 VFNPKRK 189
>gi|310777820|ref|YP_003966153.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
gi|309747143|gb|ADO81805.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
Length = 189
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG+KY TRHN+GFE+ID AE +S + G+ + D V L KPQ
Sbjct: 3 LIVGLGNPGEKYSKTRHNIGFEVIDMLAEDLKVSGFREKFQGLIGETVIKDEKVFLLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
T+MNLSG S + +YK+ P ++V +DDM L G L+++ G GHNG+KS+++
Sbjct: 63 TFMNLSGNSINEVIKFYKIDPEEDLIVIYDDMDLDLGQLKIKVKGSPAGHNGIKSIISHI 122
Query: 137 --NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK-LLLSKGLTESA 189
NF GIG+ + + F+L +F+ +D ++ + + L+ +K ++
Sbjct: 123 GENFLRVKCGIGKAKSREETVNFVLGRFSKEESNEVDPMIENASKAAQSLITAKDISRVM 182
Query: 190 RHFN 193
+ +N
Sbjct: 183 QKYN 186
>gi|317120948|ref|YP_004100951.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
gi|315590928|gb|ADU50224.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
Length = 220
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
P + VGLGNPG +Y+GTRHNVGF ++DA A + + + +G PV L K
Sbjct: 2 PRIIVGLGNPGPEYEGTRHNVGFAVVDALARRLRTAGWRRGFASLWAEGSWRGQPVALLK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM-- 135
PQTYMN SGE+ +++P VLV +DD+ LP G LRLR G GGH G+ S++
Sbjct: 62 PQTYMNASGEAVQQACRAWRVPPAEVLVVYDDLDLPPGHLRLRPRGSAGGHRGVASIIAA 121
Query: 136 ---NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+F GIGRPP +D ++L F+ + ++ A+Q E + +L+ GL +
Sbjct: 122 LGGEDFPRLRIGIGRPPAGVDAAEYVLAPFDPAEQPLMEAAVQRAAEAVLAVLATGLQLA 181
Query: 189 ARHFN 193
+N
Sbjct: 182 MSRYN 186
>gi|397690859|ref|YP_006528113.1| peptidyl-tRNA hydrolase [Melioribacter roseus P3M]
gi|395812351|gb|AFN75100.1| peptidyl-tRNA hydrolase [Melioribacter roseus P3M]
Length = 192
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTY 81
+GLGNPG Y+ TRHN+GF ++D FA+ Q ++ N + +G +G + +L KP T+
Sbjct: 5 IGLGNPGKAYENTRHNIGFIVLDRFAKLQKLNFNPEYNYLK-SEGSIGSSDFILVKPTTF 63
Query: 82 MNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGI 141
MNLSG + L + Y++P +LV DD+ L G LR+R +GG GGHNGLKS++ +
Sbjct: 64 MNLSGLAAKNLLSNYEIPTEEMLVITDDIYLESGKLRIRRSGGDGGHNGLKSIIEHLETT 123
Query: 142 GRP--------PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFN 193
P P + ++L F+ + ID ++++ V++L+ ++ G HF+
Sbjct: 124 NFPRLRFGIGDPAESTLSEYVLSPFSENELKIIDISVEKAVQLLEYFVAGGYKAMLDHFS 183
Query: 194 TIQ 196
I
Sbjct: 184 KIS 186
>gi|227504130|ref|ZP_03934179.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199262|gb|EEI79310.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 198
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAF-AESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
WL VGLGNPG KY TRHNVG+ +D AES + T V D PVL+ +
Sbjct: 13 WLVVGLGNPGAKYAATRHNVGYMAVDDLLAESGELLQPVAGHSLTAAPLNVADTPVLVVR 72
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
T+MNLSG+ PLA +P RVLV HD++ LP +R++ G GHNGLKS+
Sbjct: 73 SATFMNLSGDPIAPLAQQLGIPAERVLVIHDELDLPPNKIRIKVGGNENGHNGLKSLTER 132
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPP ++L +A A D A++ + ++L++S G+ +
Sbjct: 133 LGTRDYPRVRIGIGRPPKGSSIPDYVLGPIDADA--GFDAAIETAADAVRLIVSSGIQSA 190
Query: 189 ARHFNT 194
++
Sbjct: 191 QNEIHS 196
>gi|373495518|ref|ZP_09586101.1| peptidyl-tRNA hydrolase [Eubacterium infirmum F0142]
gi|371964655|gb|EHO82166.1| peptidyl-tRNA hydrolase [Eubacterium infirmum F0142]
Length = 190
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 14/187 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L GLGNPG KY+ TRHN+GF +ID A +S++ K+ G+ +G V+L KP
Sbjct: 2 FLIAGLGNPGKKYEKTRHNLGFMVIDELARRNSVSVDKSKFKSLTGEFKLGGEKVILMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGE+ +YK+ L +LV +DD+ +P G LR+R +G G HNG+KSV++
Sbjct: 62 QTYMNLSGEAIREAVNFYKIDLKNLLVIYDDLDIPMGALRIRTSGSSGTHNGMKSVVSQL 121
Query: 139 ---------RGIG--RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIG + +D F++ K + + + E ++ ++ G+ +
Sbjct: 122 GSRDFPRVRIGIGSNKDDNLID---FVIGKPSKSEEAVLSDTVSEAAHAVECYIADGIDK 178
Query: 188 SARHFNT 194
+ FN+
Sbjct: 179 AMNRFNS 185
>gi|302388385|ref|YP_003824207.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
gi|302199013|gb|ADL06584.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
Length = 188
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP +Y+ TRHNVGFE +D A+ G + +A G G +G V+L+KP
Sbjct: 2 YIIAGLGNPTREYEKTRHNVGFEAVDILADKLGARVTEKKHRAFCGTGRIGPEKVILSKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGES +A +YK+ + +++ DD+ L G LR+R G GGHNGLK+++N+
Sbjct: 62 QTFMNLSGESIRAMADFYKVEPDHIIIICDDINLAEGQLRIRTKGSAGGHNGLKNIINHL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P +MD ++L +F +D A Q+ E +++++G +
Sbjct: 122 GTQEFSRIRVGVGEKPKEMDLADYVLGRFPREQEGVMDQAYQDAAEAAIMMVTEGAEAAM 181
Query: 190 RHFN 193
FN
Sbjct: 182 NFFN 185
>gi|172036669|ref|YP_001803170.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|354554483|ref|ZP_08973787.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51472]
gi|171698123|gb|ACB51104.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|353553292|gb|EHC22684.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51472]
Length = 204
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 21/193 (10%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP--- 72
P L VGLGNP KY TRHN+GFE++D AE+ G+S + QG + G++P
Sbjct: 12 PKLIVGLGNPEPKYDKTRHNIGFEIVDILAETWGLSWK----ENRRFQGLIAEGNSPTYQ 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KP TYMN SG+S + +YKL VLV +DDM LP G +R+R +G GGHNG+
Sbjct: 68 KIYLLKPLTYMNRSGQSVRAVTDWYKLIATDVLVIYDDMDLPIGRMRMRLSGSAGGHNGM 127
Query: 132 KSVMN-----NFR----GIGRPPGQMDPK-AFLLQKFNAIARERIDTALQEGVEVLKLLL 181
KS+++ NF GIG+ GQ+D + +L +F R+ +D V+ ++ L
Sbjct: 128 KSIISHLGEQNFPRLRIGIGK-SGQLDNTVSHVLGRFAPEERKIVDKTFPLVVDAIETSL 186
Query: 182 SKGLTESARHFNT 194
+G+ ++ FN+
Sbjct: 187 KEGIEKAMSLFNS 199
>gi|67925084|ref|ZP_00518461.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
gi|67853058|gb|EAM48440.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
Length = 204
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 11/188 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLL 75
P L VGLGNP KY TRHN+GFE++D AE+ +S T + +G + L
Sbjct: 12 PQLIVGLGNPEPKYDKTRHNIGFEIVDILAETWQLSWKETRRFQGMIAEGNSRNQQKIYL 71
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + +YKL VLV +DDM LP G LR+R +G GGHNG+KS++
Sbjct: 72 LKPSTYMNRSGQSVRAVTDWYKLKSENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSII 131
Query: 136 N-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
+ NF GIG+ + +L +F+ R+ ID V+ ++ L +G+
Sbjct: 132 SHLGGQNFPRLRIGIGKSNQVDNTIPHVLGRFSPEERKIIDKTYPLVVDAIETTLKEGVE 191
Query: 187 ESARHFNT 194
++ FN+
Sbjct: 192 KAMSQFNS 199
>gi|421512583|ref|ZP_15959386.1| Peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29212]
gi|401674271|gb|EJS80626.1| Peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29212]
Length = 188
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS-----V 134
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS V
Sbjct: 63 TFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLV 122
Query: 135 MNNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ES 188
N F GIGRP +L F E + A+++ + L +G T E+
Sbjct: 123 TNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|422698802|ref|ZP_16756687.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
gi|315172644|gb|EFU16661.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
Length = 188
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q IS N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNISFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ES 188
GIGRP +L F E + A+++ + L +G T E+
Sbjct: 123 TNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|302388650|ref|YP_003824471.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
gi|302199278|gb|ADL06848.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
Length = 187
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y+ TRHNVGF ++D+ A GI ++ V K G+G +LL KP
Sbjct: 2 FLIVGLGNPGREYEETRHNVGFMVLDSLAAELGIKVDKVKFKGLLGEGVYEGKKLLLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SG+S +YK+P ++V +DDM LP G LR+R +G GG G++S++ +
Sbjct: 62 MTYMNNSGQSVVEAVKFYKIPPENLVVIYDDMDLPVGRLRVRGSGSSGGQKGMESIIYHI 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRP G D +L +F+ R++ID + V ++ G+ E+
Sbjct: 122 ATEGFPRIRIGIGRPKG--DVINHVLGRFDKEERKKIDAVIDAAVGAALTIVQHGVQEAM 179
Query: 190 RHFN 193
+N
Sbjct: 180 NRYN 183
>gi|366087295|ref|ZP_09453780.1| peptidyl-tRNA hydrolase [Lactobacillus zeae KCTC 3804]
Length = 185
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY GT+HN+GF ++D A+ G+ ++ + A + D V L KPQ
Sbjct: 3 MIVGLGNPGRKYAGTKHNMGFMVVDGLAKRLGLKLDKLEFDAATATTRIHDEKVFLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + L +Y++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 63 TYMNASGRAVRELMMFYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISATG 122
Query: 138 ----FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+R GI P Q ++L F+ ++ ID A+ + L+ L+
Sbjct: 123 SDEFYRLKIGIQHPQRQR-VVDWVLTPFSQADQQTIDEAITRADDALEDWLN 173
>gi|427440724|ref|ZP_18924996.1| aminoacyl-tRNA hydrolase [Pediococcus lolii NGRI 0510Q]
gi|425787431|dbj|GAC45784.1| aminoacyl-tRNA hydrolase [Pediococcus lolii NGRI 0510Q]
Length = 185
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F+ VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFLNGEKVLLVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++
Sbjct: 63 TYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
FR GI P Q ++L +F + + +Q + L L+
Sbjct: 123 TEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|254475939|ref|ZP_05089325.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
gi|214030182|gb|EEB71017.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
Length = 236
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY G RHN+GF +D A+ G S +A +G +G VLL KPQ
Sbjct: 3 LFVGLGNPGAKYAGNRHNIGFMALDQIADDHGFSPWKSKFQAQLSEGVLGGEKVLLLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSG+S G +YKL V+V HD++ L G R++ GGH GHNGL+S+ ++
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVIVLHDELDLAPGKARVKQGGGHAGHNGLRSIHSHIG 122
Query: 140 --------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
GIG P + ++L+ F +D L+ G+ L+KG
Sbjct: 123 ADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEVWLDDLLR-GISDGAASLAKG 174
>gi|269217261|ref|ZP_06161115.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|402829076|ref|ZP_10877957.1| aminoacyl-tRNA hydrolase [Slackia sp. CM382]
gi|269129398|gb|EEZ60483.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|402284830|gb|EJU33323.1| aminoacyl-tRNA hydrolase [Slackia sp. CM382]
Length = 185
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG++Y TRHN GFE+ID A +S C A G+ ++LAKPQ
Sbjct: 3 LIVGLGNPGEEYAHTRHNAGFEVIDLLAGELRVSYWKSECGALTGKTAYRGEDIVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
+YMN SG LAA Y + ++V HD++ + G +R++ GG GHNGLKS+ +
Sbjct: 63 SYMNASGGPVKQLAAAYGATPDDIVVIHDELDIDPGTIRVKFGGGLAGHNGLKSIAEKLQ 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+M ++L A + A G + + L GL ++ +
Sbjct: 123 TKDWARVRIGIGRPPGRMPVVDWVLGTPRKEAWDDFQQAAHLGSQAVLYFLEHGLAKTQQ 182
Query: 191 HFN 193
+N
Sbjct: 183 EYN 185
>gi|255083292|ref|XP_002504632.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
gi|226519900|gb|ACO65890.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
Length = 287
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 16/212 (7%)
Query: 2 LINRFLRRGFCTA-VARP--WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTV 57
LI R G A VA P WL VGLGNPG +++GTRHN GF+++D A ++GIS +
Sbjct: 17 LIERVRGHGSAGAGVAEPGRWLLVGLGNPGSRFEGTRHNAGFDVLDILARTEGISWTDAA 76
Query: 58 HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVL 117
+A G G + PVLLAKPQTYMNLSGES L +YK+P + +LV +DD+ G +
Sbjct: 77 RHRAKVGVGKIAGVPVLLAKPQTYMNLSGESVRSLCRWYKIPNSNLLVVYDDLDTAVGAI 136
Query: 118 RLRHNGGHGGHNGLKSVMNNFR----------GIGRPPGQMDPKAFLLQKFNAIARERID 167
+L+ GGHGGHNG++++++ GIGRP ++ +L KF ++
Sbjct: 137 KLKGKGGHGGHNGIRNIIDEVCGDKVFARVKFGIGRPKPGVEVYDHVLTKFGDDEATELE 196
Query: 168 T--ALQEGVEVLKLLLSKGLTESARHFNTIQK 197
+ + + ++ +L GL ++ NT K
Sbjct: 197 SKGTWAKACDAVRGVLVDGLDKTMSAVNTEHK 228
>gi|282853610|ref|ZP_06262947.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|386071074|ref|YP_005985970.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes ATCC 11828]
gi|422458336|ref|ZP_16534990.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
gi|422465323|ref|ZP_16541926.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|282583063|gb|EFB88443.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|315092573|gb|EFT64549.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|315104559|gb|EFT76535.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
gi|353455440|gb|AER05959.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes ATCC 11828]
Length = 200
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-----------TVHCKATFGQGF 67
WL +GLGNPG +Y GTRHNVG ++I G ++ T A G
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 68 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
V V+L + +TYMN SG + +A++ + + ++V HD++ L G LRL+ GG G
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGMTPDHLIVVHDEIDLDPGRLRLKKGGGDNG 124
Query: 128 HNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
HNGLKSV + R G+GRPPG+ DP ++L + R +D + + ++
Sbjct: 125 HNGLKSVRAHMRTGDFIRVRVGVGRPPGRQDPADWVLARVPVRQRTDMDVQVALAADAVE 184
Query: 179 LLLSKGLTESARHFNT 194
++ +GLT + FN+
Sbjct: 185 TIIKQGLTVAQNRFNS 200
>gi|293388110|ref|ZP_06632637.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
gi|291082486|gb|EFE19449.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
Length = 188
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSVGPLLTYFGADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ES 188
GIGRP +L F E I A+++ + L +G T E+
Sbjct: 123 TNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEILLAVKKAADA-ALYACEGHTFVET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|401564385|ref|ZP_10805280.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC6]
gi|400188883|gb|EJO23017.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC6]
Length = 209
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 17/191 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF----VGDAPVLL 75
+ GLGNPG +Y T+HNVGF ++DA A+ +N K F +G V L
Sbjct: 3 MIAGLGNPGAEYAQTKHNVGFMLVDALADR----LNAPAWKEDFFSAVTEVRIGGEKVFL 58
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SGE+ GP+ +YYK+ + + V HDDM +P G +R+R G GGHNG+KS++
Sbjct: 59 VKPLTYMNNSGEAVGPMLSYYKMTADDLTVVHDDMDIPAGTVRIRKKGSSGGHNGIKSII 118
Query: 136 -----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
NF G+GRPP +L F A +I A+ + ++ +++ G+
Sbjct: 119 AHVGGENFARVRIGVGRPPAGWTVINHVLAPFLAEDAPKIREAIGYLLPAVECIVTDGVE 178
Query: 187 ESARHFNTIQK 197
+ +N +K
Sbjct: 179 LAMNRYNPHKK 189
>gi|227497784|ref|ZP_03927970.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
gi|226832784|gb|EEH65167.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
Length = 198
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 17/194 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP----- 72
PWL +GLGNP +Y RHNVG +ID A G ++ +A + +G AP
Sbjct: 4 PWLIIGLGNPEARYARNRHNVGHMVIDVLAGRAGSRLSKHKARAQVAEVRLGMAPGGAPG 63
Query: 73 --VLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
V+LA+P T+MNLSG T LA +Y + P +LV HD++ LP LRL+ GG GGHN
Sbjct: 64 PRVILAEPATFMNLSGGPTAALAKFYGIDPATNLLVIHDELDLPAHTLRLKRGGGEGGHN 123
Query: 130 GLKSVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 180
GL+S+ N+ GIGRPPG+ DP F+L F A R +D L+ + ++ +
Sbjct: 124 GLRSISQAVGSRNYARLRVGIGRPPGRQDPADFVLSDFPARERAELDVTLELAADAVEAV 183
Query: 181 LSKGLTESARHFNT 194
+S G + + N+
Sbjct: 184 VSAGFEAAQQQVNS 197
>gi|282898185|ref|ZP_06306176.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
gi|281196716|gb|EFA71621.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
Length = 213
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 106/196 (54%), Gaps = 19/196 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGF-VGDAPVLL 75
P L VGLGNP KY TRHN+GF IDA + + I + + FG+G +G + +
Sbjct: 13 PQLIVGLGNPDPKYDQTRHNIGFAAIDALSRNWHIPVTENRKFQGQFGEGLALGSKKIRI 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SGES + ++YKLP VLV +DDM LP G RLR +G GGHNG+KS +
Sbjct: 73 LKPLTYMNRSGESIQAVTSWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTI 132
Query: 136 NNFR---------GIGRP---PGQMDPK-----AFLLQKFNAIARERIDTALQEGVEVLK 178
++ GIG+P P + + +L KF+ + ID L VE ++
Sbjct: 133 SHLNSQNFPRLRIGIGKPKNLPNNSNNDDGGTVSHVLGKFSPQEAKLIDPILAFVVECVE 192
Query: 179 LLLSKGLTESARHFNT 194
L L +G+ ++ N+
Sbjct: 193 LTLKQGVEKAMNRCNS 208
>gi|229816292|ref|ZP_04446601.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
gi|229808143|gb|EEP43936.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
Length = 209
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 19/199 (9%)
Query: 14 AVARP---WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD 70
A A+P + GLGNPG++Y TRHN GF ID AE G+S A V D
Sbjct: 2 AAAQPKPIRMVAGLGNPGEEYAATRHNAGFCAIDVLAEKAGVSYWKNQAGAEVAVINVND 61
Query: 71 AP-------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 123
A V+L KPQ+YMN SG L A YK+ +LV HD++ +P G +R++ G
Sbjct: 62 AEAEGGKREVVLVKPQSYMNTSGGPISKLCAQYKVKPEELLVIHDELDIPAGDVRVKVGG 121
Query: 124 GHGGHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 174
GH GHNGL+S+++ GIG PPG+M F+L++ + E + +
Sbjct: 122 GHAGHNGLRSIIDKLGSRDFSRIRAGIGNPPGRMPVADFVLKQLRSREAEDFEVMTHQAA 181
Query: 175 EVLKLLLSKGLTESARHFN 193
E L +++G+ + H N
Sbjct: 182 EAAALAVTRGVVFARDHVN 200
>gi|293115400|ref|ZP_05791311.2| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
gi|292810128|gb|EFF69333.1| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
Length = 198
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNP KY+ TRHN+GF +IDA A ISM K G+G +G V+L KP
Sbjct: 13 YVIAGLGNPEKKYEMTRHNMGFRIIDALAGRFNISMTEQKHKGLIGKGIIGGNKVILVKP 72
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE P+ YYK+ + +V DD+ L G +R+R G GGHNG+KS+++
Sbjct: 73 LTYMNLSGECIRPVCDYYKVDPSECIVAFDDISLEPGKIRIRKKGSAGGHNGIKSIISCL 132
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G P QMD ++L +FN+ + L++ ++ ++++G +
Sbjct: 133 GTDAFPRLKFGVGDKPKQMDLADYVLGRFNSEDEAIVAKELEKACNAIECMVTEGYDAAM 192
Query: 190 RHFNTI 195
+N +
Sbjct: 193 NKYNGV 198
>gi|451980524|ref|ZP_21928913.1| Peptidyl-tRNA hydrolase [Nitrospina gracilis 3/211]
gi|451762260|emb|CCQ90147.1| Peptidyl-tRNA hydrolase [Nitrospina gracilis 3/211]
Length = 189
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 102/179 (56%), Gaps = 9/179 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L +GLGNPG +Y+ TRHNVGF ++D AE I +N ++ +GQG +G PV++AKP
Sbjct: 2 YLILGLGNPGPQYELTRHNVGFMVVDNLAEKHRIPLNQHKHRSLYGQGKIGGHPVVIAKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SG + L + +P +R++V HDD+ L G ++ + GG G G+ S M
Sbjct: 62 MTYMNESGRAAQALLDAWNIPPHRMVVVHDDIDLVLGKIKRKFQGGDAGQKGVLSCMERL 121
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRP + ++L F+ E ++ ++E VE ++ +L++ T++
Sbjct: 122 GTDRFARIRVGIGRPENKHQIVDYVLSPFSEGEMEPLNHMIEEAVERVEAILTEIETQA 180
>gi|335427877|ref|ZP_08554797.1| peptidyl-tRNA hydrolase [Haloplasma contractile SSD-17B]
gi|334893803|gb|EGM32012.1| peptidyl-tRNA hydrolase [Haloplasma contractile SSD-17B]
Length = 185
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKP 78
+ VGLGNPG KYK TRHNVGF ++D + + + KA Q + + V+L KP
Sbjct: 3 IIVGLGNPGKKYKDTRHNVGFMVLDEYTRRNNLVFEHKSKYKAECVQTLINNEKVILLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGES L YY + +L+ +DD+ L CG +R + G GGHNG+KS++N
Sbjct: 63 LTYMNLSGESVKILKDYYNVDDQDILIIYDDLDLSCGKIRFKQKGSSGGHNGIKSIINCI 122
Query: 139 RG-------IGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
IG ++ P ++L KF R + +++E + ++ +SK +
Sbjct: 123 NSKTFHRLKIGIERSEVIPVVNYVLGKFTKEQRPHVLESIEESILGIEDWISKDIAYVMN 182
Query: 191 HFN 193
+N
Sbjct: 183 KYN 185
>gi|377571476|ref|ZP_09800594.1| peptidyl-tRNA hydrolase [Gordonia terrae NBRC 100016]
gi|377531306|dbj|GAB45759.1| peptidyl-tRNA hydrolase [Gordonia terrae NBRC 100016]
Length = 188
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
+ VGLGNPG KY+ TRHNVG + D S G VH K A + +G VL+AK
Sbjct: 3 IIVGLGNPGSKYEKTRHNVGAMVADGLVASAGERWK-VHKKSGAEVAEVRLGGQSVLVAK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+TYMN SG GPLA +Y + ++ ++V HD++ + G +RL+ GG GGHNGL+S+
Sbjct: 62 PRTYMNESGRQIGPLAKFYSVTVDDLIVVHDELDIDFGAVRLKRGGGEGGHNGLRSISQV 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F + AR ++ + G + ++LLL + L ES
Sbjct: 122 LGTRDYLRVRIGIGRPPGRQDPADFVLKPFPSSARNEVELLIANGCDAVELLLGQDL-ES 180
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 181 AQ--NTVHAW 188
>gi|340357160|ref|ZP_08679785.1| aminoacyl-tRNA hydrolase [Sporosarcina newyorkensis 2681]
gi|339618569|gb|EGQ23165.1| aminoacyl-tRNA hydrolase [Sporosarcina newyorkensis 2681]
Length = 207
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG Y+ TRHN+GF++ID A+ + V+L KP
Sbjct: 23 LIIGLGNPGKTYEKTRHNIGFQVIDELAKRLQAPAFQKKFNGQYTTVHTVQGKVILLKPM 82
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE PLA ++++ ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 83 TYMNLSGECVRPLADFFEVNDEEIVVLYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHLG 142
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R G+ RP G M ++L F+A + I+ A+Q+ + + E
Sbjct: 143 TTEFNRIRIGVDRPSGGMKVSDYVLAPFSADEQPLIEEAVQKSADACEEWQKTPFIEVMN 202
Query: 191 HFN 193
FN
Sbjct: 203 KFN 205
>gi|339449334|ref|ZP_08652890.1| peptidyl-tRNA hydrolase [Lactobacillus fructivorans KCTC 3543]
Length = 185
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G ++ GTRHN GF ++D FA+ GI +N A +G G V V++ KP
Sbjct: 3 MIVGLGNVGSEFDGTRHNTGFMVVDQFADQNGIEINKQKLDAMYGTGIVNGEKVMVVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
T MN SG + PL +YKL L+ +++ +DDM LP G +RLR++G GGHNG+KS++
Sbjct: 63 TMMNDSGRAVHPLMQFYKLDLDDLVIVYDDMDLPVGRIRLRNHGSAGGHNGIKSMI 118
>gi|227520042|ref|ZP_03950091.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229550503|ref|ZP_04439228.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256618333|ref|ZP_05475179.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256762051|ref|ZP_05502631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256956815|ref|ZP_05560986.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256964179|ref|ZP_05568350.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|257078485|ref|ZP_05572846.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|257081544|ref|ZP_05575905.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|257084192|ref|ZP_05578553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|257088019|ref|ZP_05582380.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|257088696|ref|ZP_05583057.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257417622|ref|ZP_05594616.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294779318|ref|ZP_06744721.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|300862116|ref|ZP_07108196.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|307268509|ref|ZP_07549884.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|307274220|ref|ZP_07555428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|307276445|ref|ZP_07557568.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|307286965|ref|ZP_07567040.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|312901072|ref|ZP_07760361.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|312904635|ref|ZP_07763790.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|384512164|ref|YP_005707257.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|397698778|ref|YP_006536566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D32]
gi|422687623|ref|ZP_16745799.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|422700061|ref|ZP_16757917.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|422702616|ref|ZP_16760445.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|422708809|ref|ZP_16766330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|422719760|ref|ZP_16776384.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|422723128|ref|ZP_16779666.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|422728432|ref|ZP_16784850.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|422733278|ref|ZP_16789599.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|422738808|ref|ZP_16793995.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|422867413|ref|ZP_16913998.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
gi|424671698|ref|ZP_18108689.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis 599]
gi|424678903|ref|ZP_18115741.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV103]
gi|424679718|ref|ZP_18116532.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV116]
gi|424684125|ref|ZP_18120851.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV129]
gi|424688434|ref|ZP_18125040.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV25]
gi|424691550|ref|ZP_18128073.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV31]
gi|424695120|ref|ZP_18131504.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV37]
gi|424696490|ref|ZP_18132835.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV41]
gi|424701878|ref|ZP_18138044.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV62]
gi|424704936|ref|ZP_18141022.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV63]
gi|424706359|ref|ZP_18142366.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV65]
gi|424719050|ref|ZP_18148278.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV68]
gi|424719970|ref|ZP_18149096.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV72]
gi|424722745|ref|ZP_18151770.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV73]
gi|424733454|ref|ZP_18162014.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV81]
gi|424735226|ref|ZP_18163696.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV85]
gi|424754570|ref|ZP_18182479.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV93]
gi|424755706|ref|ZP_18183567.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R508]
gi|428765877|ref|YP_007151988.1| peptidyl-tRNA hydrolase [Enterococcus faecalis str. Symbioflor 1]
gi|430362591|ref|ZP_19427135.1| peptidyl-tRNA hydrolase [Enterococcus faecalis OG1X]
gi|430368664|ref|ZP_19428345.1| peptidyl-tRNA hydrolase [Enterococcus faecalis M7]
gi|227072590|gb|EEI10553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229304360|gb|EEN70356.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256597860|gb|EEU17036.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256683302|gb|EEU22997.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256947311|gb|EEU63943.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256954675|gb|EEU71307.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|256986515|gb|EEU73817.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|256989574|gb|EEU76876.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|256992222|gb|EEU79524.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|256996049|gb|EEU83351.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|256997508|gb|EEU84028.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257159450|gb|EEU89410.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294453604|gb|EFG22003.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|295112542|emb|CBL31179.1| peptidyl-tRNA hydrolase [Enterococcus sp. 7L76]
gi|300848641|gb|EFK76398.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|306501911|gb|EFM71200.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|306506925|gb|EFM76072.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|306509182|gb|EFM78244.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|306515170|gb|EFM83710.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|310631987|gb|EFQ15270.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|311291818|gb|EFQ70374.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|315026786|gb|EFT38718.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|315032976|gb|EFT44908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|315036611|gb|EFT48543.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|315145386|gb|EFT89402.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|315151126|gb|EFT95142.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|315160776|gb|EFU04793.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|315165852|gb|EFU09869.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|315171411|gb|EFU15428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|315579375|gb|EFU91566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|327534053|gb|AEA92887.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|329577442|gb|EGG58891.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
gi|397335417|gb|AFO43089.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D32]
gi|402350606|gb|EJU85508.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV103]
gi|402355673|gb|EJU90435.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV116]
gi|402357966|gb|EJU92654.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis 599]
gi|402360878|gb|EJU95472.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV25]
gi|402362105|gb|EJU96645.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV31]
gi|402362682|gb|EJU97200.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV129]
gi|402368967|gb|EJV03266.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV37]
gi|402370842|gb|EJV05031.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV62]
gi|402377532|gb|EJV11430.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV41]
gi|402380126|gb|EJV13895.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV68]
gi|402380546|gb|EJV14296.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV63]
gi|402388167|gb|EJV21616.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV65]
gi|402391822|gb|EJV25102.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV81]
gi|402394933|gb|EJV28080.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV72]
gi|402400927|gb|EJV33732.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV73]
gi|402403019|gb|EJV35711.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV93]
gi|402404116|gb|EJV36747.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV85]
gi|402408991|gb|EJV41437.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R508]
gi|427184050|emb|CCO71274.1| peptidyl-tRNA hydrolase [Enterococcus faecalis str. Symbioflor 1]
gi|429512105|gb|ELA01724.1| peptidyl-tRNA hydrolase [Enterococcus faecalis OG1X]
gi|429516108|gb|ELA05603.1| peptidyl-tRNA hydrolase [Enterococcus faecalis M7]
Length = 188
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ES 188
GIGRP +L F E + A+++ + L +G T E+
Sbjct: 123 TNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|434399577|ref|YP_007133581.1| Peptidyl-tRNA hydrolase [Stanieria cyanosphaera PCC 7437]
gi|428270674|gb|AFZ36615.1| Peptidyl-tRNA hydrolase [Stanieria cyanosphaera PCC 7437]
Length = 205
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 106/191 (55%), Gaps = 19/191 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD--AP--- 72
P L VGLGNP KY TRHN+GFE +DA A+S G++ K QG + + AP
Sbjct: 12 PQLIVGLGNPEPKYDRTRHNIGFEAVDALADSWGLNWE----KNQRFQGLIAEGLAPNRS 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KP TYMN SG++ + +YK+ VLV +DDM LP G LR+R +G GGHNG+
Sbjct: 68 KIRLLKPLTYMNRSGQAVRAVIDWYKIAPESVLVIYDDMDLPIGKLRMRLSGSAGGHNGM 127
Query: 132 KSVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
KS+++ NF GIG+ G + + +L KF + + L+ ++ + L
Sbjct: 128 KSIISHLGTQNFPRLRIGIGKSDGNKETISHVLGKFAPTETKVVTDVLELAIKAVNFSLQ 187
Query: 183 KGLTESARHFN 193
+G+ ++ +N
Sbjct: 188 EGVEKAMSLYN 198
>gi|29374897|ref|NP_814050.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227555902|ref|ZP_03985949.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257418652|ref|ZP_05595646.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|422712942|ref|ZP_16769702.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
gi|422718240|ref|ZP_16774911.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|46576784|sp|Q839C0.1|PTH_ENTFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29342355|gb|AAO80121.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227174959|gb|EEI55931.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257160480|gb|EEU90440.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|315573563|gb|EFU85754.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|315582089|gb|EFU94280.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
Length = 188
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEIGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ES 188
GIGRP +L F E + A+++ + L +G T E+
Sbjct: 123 TNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|406830799|ref|ZP_11090393.1| peptidyl-tRNA hydrolase [Schlesneria paludicola DSM 18645]
Length = 200
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG Y+GTRHNVGF+++ A S V +A + VLLA PQ
Sbjct: 3 LVVGLGNPGATYEGTRHNVGFDVLSELALRWHASRPKVRFEANLSEVNYNGEKVLLAAPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
T+MN+SG S + ++++ L V+V DD+ L G LRLR +G GG GL S++
Sbjct: 63 TFMNISGRSVQQIVKFFQISLGDVMVVCDDLNLKVGQLRLRGSGSAGGQKGLLSILQVCG 122
Query: 137 -----NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
R GIGRPP +D F+L KF +ID A++ ++L + G++ +
Sbjct: 123 SDAVPRLRIGIGRPPDSVDAANFVLSKFRKDEHPKIDQAIRGAASGIELWIKDGISAAMN 182
Query: 191 HFNT 194
N
Sbjct: 183 VVNV 186
>gi|375097142|ref|ZP_09743407.1| peptidyl-tRNA hydrolase [Saccharomonospora marina XMU15]
gi|374657875|gb|EHR52708.1| peptidyl-tRNA hydrolase [Saccharomonospora marina XMU15]
Length = 199
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+G RHN+G+ ++D A G A QG + +LAKP+
Sbjct: 15 LLVGLGNPGPRYEGNRHNIGYLVLDELAARVGGKFKAHKSGAEVVQGLLAGRKAVLAKPR 74
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
++MN+SG A ++K+P + ++V HD++ LP G +RL+ GG GGHNGL+S+ +
Sbjct: 75 SFMNVSGGPVAGAARFFKVPADGIVVVHDELDLPYGSVRLKFGGGAGGHNGLRSIAKSLG 134
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPPG+MDP F+L+ F+A R+ + + + + LL +GLT +
Sbjct: 135 TGDFYRVRFGIGRPPGRMDPADFVLKDFSATERKELALNIDLCADAVTELLGRGLTAAQN 194
Query: 191 HFNT 194
F+T
Sbjct: 195 TFHT 198
>gi|167772370|ref|ZP_02444423.1| hypothetical protein ANACOL_03747 [Anaerotruncus colihominis DSM
17241]
gi|167665473|gb|EDS09603.1| aminoacyl-tRNA hydrolase [Anaerotruncus colihominis DSM 17241]
Length = 203
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 10/203 (4%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKA 61
+ N F + A W+ VGLGNPG Y+ TRHN GF ++ A G+ ++ + K+
Sbjct: 1 MFNWFSKPAAIPAGPVEWIAVGLGNPGRDYENTRHNAGFCAVERIAGKCGVKIDRLKFKS 60
Query: 62 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 121
G VLL KP T+MN SGE+ +YK+P RVLV DD+ L G LR+R
Sbjct: 61 LCADTTFGGQRVLLMKPSTFMNCSGEAVREAMQFYKIPAERVLVLFDDVSLDPGRLRIRR 120
Query: 122 NGGHGGHNGLKSVM-----NNFR----GIGRPPGQ-MDPKAFLLQKFNAIARERIDTALQ 171
G GGHNG+K+++ + F G+G+ P D A++L KF + +D A +
Sbjct: 121 QGSDGGHNGIKNMIYLTGKDTFPRIKIGVGKKPHPGYDLAAWVLGKFPKELADTMDKAYE 180
Query: 172 EGVEVLKLLLSKGLTESARHFNT 194
E +L++ + E+ +N
Sbjct: 181 RAAEAAQLIIEGKIDEAMNRYNA 203
>gi|157363318|ref|YP_001470085.1| peptidyl-tRNA hydrolase [Thermotoga lettingae TMO]
gi|172045981|sp|A8F4D7.1|PTH_THELT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157313922|gb|ABV33021.1| Aminoacyl-tRNA hydrolase [Thermotoga lettingae TMO]
Length = 187
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y RHNVGF +D F E + S + TF Q + L KP
Sbjct: 3 VIVGLGNPGPRYAFNRHNVGFMFVDRFKEFKKCSTWQHRDRYTFSQC----KDIFLVKPN 58
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSG + + + ++V +DD+ LPCG LR++ GG GGH GL+S++
Sbjct: 59 TFMNLSGIAVIKCQRDFHVTTTDIIVVYDDVDLPCGRLRIKAQGGSGGHRGLQSIIDYIG 118
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N F GIG P +D ++L+ F ID L + VE + ++L++GL+++
Sbjct: 119 TNEFVRLRIGIGPKPENIDLADYVLEDFTEEELRLIDKVLDKAVEAVDVMLNEGLSKAMS 178
Query: 191 HFNTIQ 196
FN+ +
Sbjct: 179 VFNSYE 184
>gi|418069810|ref|ZP_12707087.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici MA18/5M]
gi|357536341|gb|EHJ20372.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici MA18/5M]
Length = 185
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++
Sbjct: 63 TYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
FR GI P Q ++L +F + + +Q + L L+
Sbjct: 123 TEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|225848301|ref|YP_002728464.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643316|gb|ACN98366.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 189
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 96/178 (53%), Gaps = 12/178 (6%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGF-VGDAPVLLAKPQ 79
+GLGNPG KYK TRHNVGF + DA A + I + + + F + D V++AKPQ
Sbjct: 5 IIGLGNPGQKYKDTRHNVGFMVADAVA--KAIKCDNKYKEKDFSHIYECPDYDVIIAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + L Y L + +LV HDD+ L G +RLR G GGHNGLKS++ +
Sbjct: 63 TYMNLSGNAVLNLLEDYNLKPSEILVVHDDLDLNLGTIRLRTKGSSGGHNGLKSIIGMIK 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRP + + ++L F + +D + E + +L G+ +S
Sbjct: 123 TEEFPRLKIGIGRPARKEEVSDYVLSPFTKEEKFVLDKVIAASTECILNVLKYGIEKS 180
>gi|75910645|ref|YP_324941.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
gi|119390911|sp|Q3M4P0.1|PTH_ANAVT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|75704370|gb|ABA24046.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
Length = 213
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 16/197 (8%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDA 71
A+ P L VGLGNP KY TRHN+GF +DA A + IS+ + +G+G G
Sbjct: 9 ALVIPQLIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGV 68
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KP TYMN SG++ + ++YKL VLV +DD+ LP G RLR +G GGHNG+
Sbjct: 69 KIRLLKPLTYMNRSGQAIQAVTSWYKLSGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGM 128
Query: 132 KSVM-----NNFR----GIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEGVEVL 177
KS + NF GIG+P + + + +L KF+A + + LQ VE +
Sbjct: 129 KSAIAHLSTQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECV 188
Query: 178 KLLLSKGLTESARHFNT 194
+L L +G+ ++ N+
Sbjct: 189 ELSLKQGVEKAMNRCNS 205
>gi|304385534|ref|ZP_07367878.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
gi|304328038|gb|EFL95260.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
Length = 185
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++
Sbjct: 63 TYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
FR GI P Q ++L +F + + +Q + L L+
Sbjct: 123 TEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|319945977|ref|ZP_08020226.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|417919214|ref|ZP_12562751.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|319747785|gb|EFW00030.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|342834344|gb|EGU68618.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
Length = 189
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 101/191 (52%), Gaps = 19/191 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLA 76
L VGLGNPGDKY T+HNVGF ++D A+S ++ + H K A F+ V L
Sbjct: 4 LIVGLGNPGDKYVETKHNVGFMLVDQLAKSLNLTFS--HDKIFQADVTSTFIDGEKVFLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP T+MN SG++ L YY L + ++V +DD+ + G +RLR G GGHNG+KS++N
Sbjct: 62 KPTTFMNESGKAVHALLTYYGLEVEDLVVIYDDLDMEVGKIRLRTKGSAGGHNGIKSIIN 121
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRP M +L KF+ I A+ + E L+ L G E
Sbjct: 122 HIGTQTFNRIKIGIGRPKQGMSVVHHVLGKFDQDDYATILLAIDKSEEALRFYLKDGQFE 181
Query: 188 SARHFNTIQKY 198
T+Q+Y
Sbjct: 182 K-----TMQQY 187
>gi|227512316|ref|ZP_03942365.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
gi|227084491|gb|EEI19803.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
Length = 189
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y GTRHN GF +++ FA+ GIS+ A G FV VL+ +P
Sbjct: 6 MIVGLGNIGPQYDGTRHNTGFMVVEEFAKKHGISIKIRKMNAKMGSAFVNGQKVLVVEPT 65
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG + PL +Y+++ V+V HDDM LP G +R++ G GGHNG+KS++NN
Sbjct: 66 TFMNDSGIAVKPLMSYFEIENKDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNLG 125
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
GI P ++L +F+ A V L+ L
Sbjct: 126 TEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|393198756|ref|YP_006460598.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
gi|327438087|dbj|BAK14452.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
Length = 187
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG Y+ TRHN+GF++ID A +N + + + V+L KP
Sbjct: 3 LIIGLGNPGKPYEHTRHNIGFDVIDELANRWNAPLNQTKFNGMYATVYRPEGKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE PL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNLSGECVRPLMDYFDIEIEDIIVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQHLG 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R G+ RPP M ++L KF+ + + A+++ + ++ L+K E
Sbjct: 123 TQEFNRIRVGVSRPPAGMKVADYVLAKFSKEDQPIVKEAVEKSCDAVETALTKPFLEVMN 182
Query: 191 HFN 193
FN
Sbjct: 183 KFN 185
>gi|310829354|ref|YP_003961711.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
gi|308741088|gb|ADO38748.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
Length = 203
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L +GLGNPG +Y TRHN+GFE +D A + + + + G F V+L KP
Sbjct: 2 YLIIGLGNPGREYALTRHNIGFEAVDYIAGQKNVQITKDEHEGLTGVYFENGEKVMLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SG L +YY +PL LV +DD+ L G +R+R G G HNG++S++
Sbjct: 62 MTYMNNSGLCVEELVSYYDVPLENTLVIYDDIDLDPGKIRIRKKGSAGTHNGMRSIIYQL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GIG+ P Q D ++L KF E + A+++ E ++ +++ + +
Sbjct: 122 QDQNFPRIRIGIGKKPPQWDLANYVLSKFTPDETEVMREAVKKTAEAVEFYINEDIDFAM 181
Query: 190 RHFN 193
N
Sbjct: 182 NRLN 185
>gi|427418824|ref|ZP_18909007.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 7375]
gi|425761537|gb|EKV02390.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 7375]
Length = 209
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 18/193 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP-VLL 75
P L VGLGNPG KY TRHN+GFE+ID+ A+S I + + FG+ ++L
Sbjct: 12 PKLLVGLGNPGQKYDRTRHNIGFEVIDSLAKSWSIKLTENKRFQGHFGETRSNSGERLIL 71
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + +YKL + VLV +DDM LP G LRLR +G GGHNG+KS++
Sbjct: 72 LKPTTYMNRSGQSVRAVFDWYKLLPSEVLVIYDDMDLPIGRLRLRLSGSAGGHNGMKSII 131
Query: 136 NNF---------RGIGRPPGQMDPKA------FLLQKFNAIARERIDTALQEGVEVLKLL 180
++ GI R D +A +L KF R+ ID A+ + ++
Sbjct: 132 SHLGTQDFPRLRLGISRTDTS-DKQANRAVVSHVLGKFAPDERKVIDAAITLADDAVEFS 190
Query: 181 LSKGLTESARHFN 193
L KG+ + +N
Sbjct: 191 LRKGIERAMSLYN 203
>gi|310815222|ref|YP_003963186.1| peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare Y25]
gi|385232764|ref|YP_005794106.1| peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare WSH-001]
gi|308753957|gb|ADO41886.1| peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare Y25]
gi|343461675|gb|AEM40110.1| Peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare WSH-001]
Length = 241
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 11/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY G RHN+GF +D A G + + +G +GD VLL KP+
Sbjct: 3 LFVGLGNPGAKYAGNRHNIGFMAMDYIAGDHGFTPFRARFQGLIAEGRLGDEKVLLLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S G ++KL + V+VFHD++ L G ++ + GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVGEAMRFHKLTPDDVVVFHDELDLAPGRIKAKTGGGHAGHNGLRSIHGHIG 122
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
G+G P + +++L F ++ +D L+ G+ LL+ G + AR
Sbjct: 123 EAYHRVRMGVGHPGHKDAVASYVLHDFAKADQQWLDDMLR-GISDGAALLAAG--DQARF 179
Query: 192 FNTI 195
N +
Sbjct: 180 LNAV 183
>gi|89892925|ref|YP_516412.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense Y51]
gi|89332373|dbj|BAE81968.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 196
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y TRHN GF ++D AE + + + +G V L KPQ
Sbjct: 14 LIAGLGNPGGQYAETRHNAGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQ 72
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S LA +YK+ ++V +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 73 TFMNLSGRSIRELAQFYKIAPKDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAELG 132
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP D ++L F ++ L +G++ + L +G ++
Sbjct: 133 TEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKAMN 192
Query: 191 HFN 193
+N
Sbjct: 193 LYN 195
>gi|389855717|ref|YP_006357960.1| peptidyl-tRNA hydrolase [Streptococcus suis ST1]
gi|353739435|gb|AER20442.1| peptidyl-tRNA hydrolase [Streptococcus suis ST1]
Length = 189
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 11/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAKP 78
L +GLGNPGD+Y T+HNVGF ++D A+ + ++ N +A F+ + L KP
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNQDKIFQADIATTFIDGEKIYLVKP 63
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MN SG++ L YY L +LV +DD+ + G +R R G GGHNG+KS++ +
Sbjct: 64 TTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKHI 123
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRP G+M +L F+ R ID AL + + + + L + ++
Sbjct: 124 GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFDTV 183
Query: 190 -RHFN 193
R FN
Sbjct: 184 MRKFN 188
>gi|396585884|ref|ZP_10486049.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM47]
gi|395546512|gb|EJG14133.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM47]
Length = 200
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 16/187 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVGD 70
PWL VGLGNPG +Y TRHNVG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYASTRHNVGYLTLDVLAARGGATLTSHRSRTHTADVRLGIGPGGVPG 65
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
VLLA+ +YMN SG LA++ K+P R+LV HDDM LP LRL+ GG GGHNG
Sbjct: 66 PRVLLARSDSYMNTSGGPISALASFLKVPPARILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 131 LKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
LKS+ + G+GRPPG+MDP ++L + R D ++ +V++ ++
Sbjct: 126 LKSLTQHLHTRDYARLRIGVGRPPGRMDPADYVLAALPSKERPDWDVTFEQAADVVEDIV 185
Query: 182 SKGLTES 188
+KG +
Sbjct: 186 TKGFAPT 192
>gi|255974756|ref|ZP_05425342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256855210|ref|ZP_05560571.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|307278655|ref|ZP_07559725.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|307290198|ref|ZP_07570116.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|422686434|ref|ZP_16744631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
gi|255967628|gb|EET98250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256709723|gb|EEU24770.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|306498754|gb|EFM68253.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|306504715|gb|EFM73915.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|315028826|gb|EFT40758.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
Length = 188
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 80/134 (59%), Gaps = 9/134 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRP 144
GIGRP
Sbjct: 123 TNVFPRIKIGIGRP 136
>gi|219666189|ref|YP_002456624.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|423075769|ref|ZP_17064483.1| aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DP7]
gi|119390936|sp|Q251S4.2|PTH_DESHY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783865|sp|B8FZA5.1|PTH_DESHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219536449|gb|ACL18188.1| Aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|361853181|gb|EHL05362.1| aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DP7]
Length = 185
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y TRHN GF ++D AE + + + +G V L KPQ
Sbjct: 3 LIAGLGNPGGQYAETRHNAGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S LA +YK+ ++V +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 62 TFMNLSGRSIRELAQFYKIAPKDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAELG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP D ++L F ++ L +G++ + L +G ++
Sbjct: 122 TEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKAMN 181
Query: 191 HFN 193
+N
Sbjct: 182 LYN 184
>gi|402851636|ref|ZP_10899782.1| Peptidyl-tRNA hydrolase [Rhodovulum sp. PH10]
gi|402498098|gb|EJW09864.1| Peptidyl-tRNA hydrolase [Rhodovulum sp. PH10]
Length = 207
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y G RHN+GF +DA A G + + +G +G VLL KP+
Sbjct: 3 LLVGLGNPGARYAGNRHNIGFMAVDAIARRHGFAPWRRRFQGLVCEGAIGSEKVLLLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG + G +YKL L + V HD++ LP G +RL+ GG GHNGL+S+
Sbjct: 63 TYMNESGRAVGEAVKFYKLGLPDITVLHDEIDLPPGKVRLKVGGGAAGHNGLRSISAHVG 122
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
N +R G+G P + + ++LQ F RE ++T L + V LL+KG
Sbjct: 123 NEYRRVRLGVGHPGTREMVQHWVLQDFAKSEREWVET-LCDLVADHADLLAKGQDA---- 177
Query: 192 FNTIQKYKHIRLQ 204
T Q H+ +Q
Sbjct: 178 --TFQNKVHLAMQ 188
>gi|392391781|ref|YP_006428383.1| peptidyl-tRNA hydrolase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390522859|gb|AFL98589.1| peptidyl-tRNA hydrolase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 185
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG +Y TRHN GF ++D AE + + + +G V L KPQ
Sbjct: 3 LIAGLGNPGGQYAETRHNAGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S LA +YK+ ++V +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 62 TFMNLSGRSIRELAQFYKITPKDIIVVYDDMDLPLGRLRLRSSGSAGGHNGIKSTIAELG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
GIGRPP D ++L F ++ +L +G++ + L
Sbjct: 122 TEGFWRLKVGIGRPPAGWDSARYVLASFTKEEIPVLEESLDKGMKAVAL 170
>gi|118619724|ref|YP_908056.1| peptidyl-tRNA hydrolase [Mycobacterium ulcerans Agy99]
gi|166229426|sp|A0PW66.1|PTH_MYCUA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118571834|gb|ABL06585.1| peptidyl-tRNA hydrolase Pth [Mycobacterium ulcerans Agy99]
Length = 191
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 105/182 (57%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG+ Y TRHN+GF + D A G VH + A G +
Sbjct: 1 MAEPLLVVGLGNPGENYARTRHNLGFMVADLLAARLGAKFK-VHKRSGAEVVTGRLAQRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV NF+ GIGRPPG+ DP F+L+ F++ R + T ++ + +LL+
Sbjct: 120 SVAAALGTKNFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVEV 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|373464508|ref|ZP_09556045.1| aminoacyl-tRNA hydrolase [Lactobacillus kisonensis F0435]
gi|371762363|gb|EHO50897.1| aminoacyl-tRNA hydrolase [Lactobacillus kisonensis F0435]
Length = 186
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y TRHN GF +++ FA++ GI++ T A +G GF+ + V++ +P
Sbjct: 3 MIVGLGNIGPQYDRTRHNTGFMVVEQFAQAHGINIKTRKMNAKYGSGFINNEKVIVVEPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MN SG + PL Y+ +P+ + + HDDM LP G +R++ G GGHNG+KS++ N
Sbjct: 63 TFMNDSGIAVKPLMDYFDIPVENIAIVHDDMDLPVGKIRVKDKGSAGGHNGIKSIIYNL 121
>gi|319789279|ref|YP_004150912.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
gi|317113781|gb|ADU96271.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
Length = 188
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHNVG+ ++D A+ G+S+N K +G+ + V+L KP
Sbjct: 4 LVVGLGNPGREYEKTRHNVGWMVLDRLADKLGVSLNREKFKGLYGEYRGENGKVILLKPL 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SGES Y+K+ ++V +DD+ LP G LRL+ G GGH G++S++
Sbjct: 64 TYMNRSGESVSQFLRYFKIAPEEMVVVYDDLDLPLGKLRLKPKGSSGGHRGVESIIRELG 123
Query: 136 -NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+NF GIGRP + + ++L F I+ A+ + L LL+S
Sbjct: 124 TSNFPRLKVGIGRPARKEEVVDYVLSPFGREQWPAIEEAVDRASDCLNLLIS 175
>gi|420146319|ref|ZP_14653745.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398401981|gb|EJN55386.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 188
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HNVGF ID A + ++ + +A + F D V L KPQ
Sbjct: 3 MIVGLGNPGKKYEQTKHNVGFMTIDRMAAAHQVTFSHNQFEANYATYFENDEKVYLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG + PL YY++ L ++V +DDM L G LRLR +G GGHNG+KS++
Sbjct: 63 TFMNDSGRAVKPLMTYYQIQLAELMVVYDDMDLVPGRLRLREHGSAGGHNGIKSLISFLQ 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
N R G G P + ++L F+ A+ +D ++ +E L+
Sbjct: 123 TSDFNRVRIGTGHPE-RRSVVDWVLSPFSDEAQPLVDRSIDTAIEALE 169
>gi|336112718|ref|YP_004567485.1| peptidyl-tRNA hydrolase [Bacillus coagulans 2-6]
gi|335366148|gb|AEH52099.1| peptidyl-tRNA hydrolase [Bacillus coagulans 2-6]
Length = 185
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGNPG +Y+ TRHN+GFE+++ AE K + V VLL KP T
Sbjct: 4 IVGLGNPGAQYEHTRHNIGFEVVNLLAERLQAPFKQSKFKGLCAETTVNGEKVLLLKPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
YMNLSGES YY+L +LV +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 YMNLSGESVKAAMDYYRLGTGDLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIHHLGT 123
Query: 136 ---NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
N R GIGRP + ++L +F+ R ++ A+++ + + L K
Sbjct: 124 QEFNRIRIGIGRPDRDIYMPDYVLGRFSKEDRVKMQLAVEKSADACEAWLEK 175
>gi|270290198|ref|ZP_06196424.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
gi|270281735|gb|EFA27567.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
Length = 185
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 90/167 (53%), Gaps = 10/167 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++
Sbjct: 63 TYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
FR GI P Q ++L +F + + +Q + L
Sbjct: 123 TEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAAL 168
>gi|335047037|ref|ZP_08540058.1| aminoacyl-tRNA hydrolase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333760845|gb|EGL38400.1| aminoacyl-tRNA hydrolase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 195
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG Y TRHNVG+ +ID A+ I+M K+ +GQ + + KP
Sbjct: 6 YLIVGLGNPGKNYVETRHNVGYGVIDILADKYSINMKKEKFKSFYGQINMFRKKCVFLKP 65
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSGE+ Y+K+ ++V DD+ +P G +R++ G G HNGL+S++ +
Sbjct: 66 LTYMNLSGEAVIDAVNYFKIKPENIIVVLDDIDIPFGTVRIKKKGSAGTHNGLRSIIYHL 125
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+G+ P MD K F+L KF++ + + L+ + ++ ++ + ++
Sbjct: 126 ETEDFPRVRISVGKCPDYMDLKDFVLSKFSSTEEKILKKELEIAADAVEEIIKSDVDKTM 185
Query: 190 RHFN 193
+N
Sbjct: 186 CKYN 189
>gi|311743168|ref|ZP_07716976.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
gi|311313848|gb|EFQ83757.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
Length = 188
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 77
WL GLGNPG Y TRHNVG+ + D AE G + +A +G + V+L +
Sbjct: 3 WLIAGLGNPGPAYAATRHNVGYLVTDVLAERVGGRWKSHRASRAEVVEGRLAGERVVLGR 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
++YMN SG +A ++ + ++V HD++ + G LRL+ GG GHNGLKS+ +
Sbjct: 63 SRSYMNESGGPVKAMATFFDVEPEHLVVVHDELDIDFGQLRLKLGGGDNGHNGLKSIRGS 122
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPGQ ++L+ ++A R+ +D + E + ++ LL++GL +
Sbjct: 123 LGTGDFHRVRVGIGRPPGQQTVHDYVLKPWSAAERKELDLNVVEAADAVESLLTRGLEAT 182
Query: 189 ARHFN 193
FN
Sbjct: 183 QSAFN 187
>gi|169830289|ref|YP_001716271.1| aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
gi|238688211|sp|B1I197.1|PTH_DESAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169637133|gb|ACA58639.1| Aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
Length = 195
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 12/184 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY+ TRHN GF ++D A + G ++N C + G+G + V+LAKPQ
Sbjct: 3 LIVGLGNPGAKYRFTRHNAGFMVVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSG + L +Y+L L +LV DD+ L G +RLR GG GGH GL S++
Sbjct: 63 TYMNLSGLAVSALCRHYRLELADLLVICDDLDLEFGRIRLRPKGGSGGHRGLASIIAALG 122
Query: 136 -NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
++F GIG+ D A +L +F + ++ L +GL E+
Sbjct: 123 SSDFPRVRIGIGKAE---DASAHVLGEFAPEDQSGLEEILSTAALAAACACREGLDEAMS 179
Query: 191 HFNT 194
FN+
Sbjct: 180 RFNS 183
>gi|160914797|ref|ZP_02077011.1| hypothetical protein EUBDOL_00804 [Eubacterium dolichum DSM 3991]
gi|158433337|gb|EDP11626.1| aminoacyl-tRNA hydrolase [Eubacterium dolichum DSM 3991]
Length = 186
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN GF ++DA A+ + +N KA Q +G VLL KPQ
Sbjct: 3 LIVGLGNPGKEYENTRHNSGFCVMDAIAKECNVEINQKKFKALVAQTRIGKESVLLMKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE+ +Y + + +LV +DD+ LP G +RLR G GG NG+K+++
Sbjct: 63 TYMNLSGEALIQAVNFYHIDIKDILVIYDDLDLPVGKIRLREKGSAGGQNGMKNIIQHLH 122
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R GIG+ ++ ++L K +E + A+++ + S ++
Sbjct: 123 TQEFNRIRVGIGK-DARVPVIDWVLGKIRKEEQEAYEQAIKQACDAAIYSCSHSFIDTMS 181
Query: 191 HFN 193
+N
Sbjct: 182 AYN 184
>gi|17228339|ref|NP_484887.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
gi|21263848|sp|Q8YYK4.1|PTH_ANASP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|17130189|dbj|BAB72801.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
Length = 203
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVLL 75
P L VGLGNP KY TRHN+GF +DA A + IS+ + +G+G G + L
Sbjct: 3 PQLIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRL 62
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG++ + ++YKL VLV +DD+ LP G RLR +G GGHNG+KS +
Sbjct: 63 LKPLTYMNRSGQAIQAVTSWYKLSGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAI 122
Query: 136 NNFR---------GIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
+ GIG+P + + + +L KF+A + + LQ VE ++L L
Sbjct: 123 AHLSTQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSL 182
Query: 182 SKGLTESARHFNT 194
+G+ ++ N+
Sbjct: 183 KQGVEKAMNRCNS 195
>gi|427718430|ref|YP_007066424.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 7507]
gi|427350866|gb|AFY33590.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 7507]
Length = 213
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 22/196 (11%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPV--- 73
P L VGLGNP KY TRHN+GF +DA + + I + + FG+G AP+
Sbjct: 13 PQLIVGLGNPEPKYNQTRHNIGFAAVDALSRTWQIPLAENRKFQGEFGEGI---APIGGK 69
Query: 74 -LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
L KP TYMN SG++ + ++YKLP VL+ +DDM LP G RLR +G GGHNG+K
Sbjct: 70 IRLLKPSTYMNRSGQAIQAVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSAGGHNGMK 129
Query: 133 SVMNNFR---------GIGRPPG-----QMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
S + + GIG+P G + + +L +F++ + + LQ VE ++
Sbjct: 130 SAIAHLSTQDFPRLRIGIGKPKGAGNVEESGTVSHVLGRFSSTETQLMSLVLQFVVECIE 189
Query: 179 LLLSKGLTESARHFNT 194
L L +G+ ++ N+
Sbjct: 190 LSLKQGVEKAMNRCNS 205
>gi|392972512|ref|ZP_10337901.1| peptidyl-tRNA hydrolase [Staphylococcus equorum subsp. equorum Mu2]
gi|403047727|ref|ZP_10903185.1| peptidyl-tRNA hydrolase [Staphylococcus sp. OJ82]
gi|392509485|emb|CCI61208.1| peptidyl-tRNA hydrolase [Staphylococcus equorum subsp. equorum Mu2]
gi|402762468|gb|EJX16572.1| peptidyl-tRNA hydrolase [Staphylococcus sp. OJ82]
Length = 190
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ T+HN+GFE+ID + S++ K + +G V+ +P T
Sbjct: 4 IVGLGNIGKRFEQTKHNIGFEVIDYMLDQNQFSLDKQKFKGAYTIERIGGEKVMFIEPLT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ GPL YY + ++ ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVGPLMKYYDIDIDDLVVLYDDLDLPQGEIRLRQKGSAGGHNGIKSMIQVLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+ RP M ++LQKF+ + ++ ++ ++ + ES+R
Sbjct: 124 DQFKRIRIGVDRPSNGMSIVDYVLQKFSKQEMQIMNKVIEHSARAVEAYI-----ESSRF 178
Query: 192 FNTIQKY 198
+ +Y
Sbjct: 179 DRVMNEY 185
>gi|229546914|ref|ZP_04435639.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255971756|ref|ZP_05422342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257421546|ref|ZP_05598536.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|312952656|ref|ZP_07771520.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|384517336|ref|YP_005704641.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
gi|422691669|ref|ZP_16749698.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|422695395|ref|ZP_16753381.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|422706365|ref|ZP_16764066.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|422726416|ref|ZP_16782863.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|229307842|gb|EEN73829.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255962774|gb|EET95250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257163370|gb|EEU93330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|310629444|gb|EFQ12727.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|315147121|gb|EFT91137.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|315153560|gb|EFT97576.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|315156260|gb|EFU00277.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|315158595|gb|EFU02612.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|323479469|gb|ADX78908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
Length = 188
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 80/134 (59%), Gaps = 9/134 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRP 144
GIGRP
Sbjct: 123 TNVFPRIKIGIGRP 136
>gi|332685797|ref|YP_004455571.1| peptidyl-tRNA hydrolase [Melissococcus plutonius ATCC 35311]
gi|332369806|dbj|BAK20762.1| peptidyl-tRNA hydrolase [Melissococcus plutonius ATCC 35311]
Length = 188
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF +D A + N +A F+ ++L KP
Sbjct: 3 MIVGLGNPGTKYQATKHNIGFITLDEIATRYKVDFNKNQFEAVTTDFFIDSEKIMLIKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG S GPL YY L L+ +++ +DD+ LP G +R+R G GGHNG+KS++
Sbjct: 63 TYMNESGRSIGPLVDYYGLNLSDLIIIYDDLDLPVGKVRVRAKGSAGGHNGIKSLIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE-VLKLLLSKGLTESA 189
N+F GI RP +L F I A++ + + + S + ++
Sbjct: 123 TNDFTRIKVGISRPENNDTVIHHVLSAFKKEQHTEIQKAIKTAADAAIYMCSSHTVIDAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NQFN 186
>gi|357162595|ref|XP_003579460.1| PREDICTED: CRS2-like protein, chloroplastic-like [Brachypodium
distachyon]
Length = 228
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 62/72 (86%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+PWLFVGLGNPG+KY+ TRHNVGF+MIDAFA+SQGI + T H KA FG+G V PVLLA
Sbjct: 156 QPWLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHHFKALFGEGMVDGVPVLLA 215
Query: 77 KPQTYMNLSGES 88
KPQTY+NLSGES
Sbjct: 216 KPQTYINLSGES 227
>gi|313891661|ref|ZP_07825268.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
gi|313119939|gb|EFR43124.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
Length = 190
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF++++ F+ +S+ + ++ AKPQ
Sbjct: 3 LIVGLGNPGKEYEKTRHNIGFDVLELFSHRNKLSLWKNFMNSEISTVMNNGEKIIFAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMN SGES G +A YYK+ + V DD+ LP G +R+R G GGHNGLKS+M + +
Sbjct: 63 TYMNNSGESIGDIAKYYKIEPEDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMAHLQ 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIG P +L + ++I+ A ++ E ++ L + + ++
Sbjct: 123 SENFCRFRVGIGHPKNGHTVIEHVLGRPYGEDIKKIEEAEEKVAESIEFALKENIDKAMN 182
Query: 191 HFN 193
+FN
Sbjct: 183 YFN 185
>gi|256960621|ref|ZP_05564792.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|293382708|ref|ZP_06628633.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|312908604|ref|ZP_07767546.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|312909248|ref|ZP_07768105.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
gi|256951117|gb|EEU67749.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|291079868|gb|EFE17232.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|310625391|gb|EFQ08674.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|311290490|gb|EFQ69046.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
Length = 188
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KYK T+HN+GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG S GPL Y+ ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TFMNESGRSVGPLLTYFGADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT--ES 188
GIGRP +L F E + A+++ + L +G T E+
Sbjct: 123 TNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFVET 181
Query: 189 ARHFN 193
FN
Sbjct: 182 MNQFN 186
>gi|408418649|ref|YP_006760063.1| peptidyl-tRNA hydrolase Pth [Desulfobacula toluolica Tol2]
gi|405105862|emb|CCK79359.1| Pth: peptidyl-tRNA hydrolase [Desulfobacula toluolica Tol2]
Length = 193
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 73
+ ++ + GLGNPG Y TRHN+GF +++A A ++++ ++ + +G + D V
Sbjct: 2 SCSKFKIIAGLGNPGKGYAQTRHNIGFLVVEALASKSHLTIDKTRFESHYVKGRIKDQDV 61
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+ KP TYMNLSG S A+YYK+ + +++ HDDM L G +++ + GHGGHNG++S
Sbjct: 62 FIIKPLTYMNLSGFSIHRFASYYKVGIEDIIIVHDDMDLAFGKIKIVKSRGHGGHNGVRS 121
Query: 134 VMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
++ F G+G P D +L F+ + +D + + +L G
Sbjct: 122 ILEVFGKKDCIRIRVGVGHPGSGKDVTGHVLGGFSPDEIKILDHCIDTASDACLYVLENG 181
Query: 185 LTESARHFNT 194
+T + FNT
Sbjct: 182 VTSAMNLFNT 191
>gi|386585209|ref|YP_006081611.1| peptidyl-tRNA hydrolase [Streptococcus suis D12]
gi|353737355|gb|AER18363.1| peptidyl-tRNA hydrolase [Streptococcus suis D12]
Length = 190
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 15/187 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLA 76
L +GLGNPGD+Y T+HNVGF ++D A+ + ++ N H K A F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFN--HDKIFQADIATTFIDGEKIYLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP T+MN SG++ L YY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 62 KPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVK 121
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRP G+M +L F+ R ID AL + + + + L + +
Sbjct: 122 HIGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFD 181
Query: 188 SA-RHFN 193
+ R FN
Sbjct: 182 TVMRKFN 188
>gi|383767710|ref|YP_005446692.1| peptidyl-tRNA hydrolase [Phycisphaera mikurensis NBRC 102666]
gi|381387979|dbj|BAM04795.1| peptidyl-tRNA hydrolase [Phycisphaera mikurensis NBRC 102666]
Length = 191
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 99/186 (53%), Gaps = 12/186 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIS--MNTVHCKATFGQGFVGDAP--VLL 75
L +GLGNPG +Y TRHN GF +++ FA G++ H G VG AP +LL
Sbjct: 3 LIIGLGNPGREYADTRHNAGFMVLERFATRHGLAGPRQRFHAGTIDGSVTVGGAPHKLLL 62
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
+P TYMN SG+S +YK+ + VL+ DD+ CG LRL+ G GGHNGLK V
Sbjct: 63 VQPLTYMNRSGQSVREAVDFYKVAVKDVLIVVDDIAFGCGDLRLKAMGSAGGHNGLKDVE 122
Query: 136 NNF--RGIGR------PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
R R PG++ ++L +F A RER+D AL E + ++ L+ G+ +
Sbjct: 123 RVLGTRAYARLRIGIDAPGRIPQVDYVLGRFTADQRERLDPALDEACQAVEAWLTLGIEK 182
Query: 188 SARHFN 193
+ N
Sbjct: 183 AMNKVN 188
>gi|257064879|ref|YP_003144551.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
gi|256792532|gb|ACV23202.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
Length = 190
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 10/188 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG++Y TRHN GF+ + AE ++ C A + VLLAKPQ
Sbjct: 3 LIVGLGNPGEEYDHTRHNAGFDTVSLLAEELRVNYWKTECGALTAKTTYRGEDVLLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
++MN+SG L A Y++ P ++V HD++ + G +R++ GG GHNGLKS+
Sbjct: 63 SFMNVSGGPVKQLCAKYEVDPKTDLIVIHDELDIDPGTIRVKFGGGLAGHNGLKSIDAKL 122
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GIGRPPG+M ++L K A + Q G E + + GL ++
Sbjct: 123 QTRDWLRIRIGIGRPPGRMPVTDWVLSKPKKEAWDDFVQGTQLGCEAVLYYMDNGLDKAQ 182
Query: 190 RHFNTIQK 197
+ +N+ K
Sbjct: 183 QKYNSSAK 190
>gi|146317669|ref|YP_001197381.1| peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|146319858|ref|YP_001199569.1| peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|253750930|ref|YP_003024071.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|253752829|ref|YP_003025969.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|253754654|ref|YP_003027794.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|386577009|ref|YP_006073414.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|386578987|ref|YP_006075392.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
gi|386581054|ref|YP_006077458.1| peptidyl-tRNA hydrolase [Streptococcus suis SS12]
gi|386587288|ref|YP_006083689.1| peptidyl-tRNA hydrolase [Streptococcus suis A7]
gi|403060710|ref|YP_006648926.1| peptidyl-tRNA hydrolase [Streptococcus suis S735]
gi|166229459|sp|A4VYI0.1|PTH_STRS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229461|sp|A4VS92.1|PTH_STRSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145688475|gb|ABP88981.1| Peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|145690664|gb|ABP91169.1| Peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|251815219|emb|CAZ50783.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|251817118|emb|CAZ54839.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|251819074|emb|CAR44088.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|292557471|gb|ADE30472.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|319757179|gb|ADV69121.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
gi|353733200|gb|AER14210.1| peptidyl-tRNA hydrolase [Streptococcus suis SS12]
gi|354984449|gb|AER43347.1| peptidyl-tRNA hydrolase [Streptococcus suis A7]
gi|402808036|gb|AFQ99527.1| peptidyl-tRNA hydrolase [Streptococcus suis S735]
Length = 189
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 15/187 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLA 76
L +GLGNPGD+Y T+HNVGF ++D A+ + ++ N H K A F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFN--HDKIFQADIATTFIDGEKIYLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP T+MN SG++ L YY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 62 KPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVK 121
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRP G+M +L F+ R ID AL + + + + L + +
Sbjct: 122 HIGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFD 181
Query: 188 SA-RHFN 193
+ R FN
Sbjct: 182 TVMRKFN 188
>gi|359424657|ref|ZP_09215769.1| peptidyl-tRNA hydrolase [Gordonia amarae NBRC 15530]
gi|358239954|dbj|GAB05351.1| peptidyl-tRNA hydrolase [Gordonia amarae NBRC 15530]
Length = 188
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 111/190 (58%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG +Y+ TRHNVG ++DA S G VH K A + PVL+A+
Sbjct: 3 LVVGLGNPGPQYEKTRHNVGAMVVDALVASAGERWK-VHKKSGAQVATARLAGEPVLIAR 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMN +G GPLA +Y + ++V HD++ + G++RL+ GG GGHNGL+S+
Sbjct: 62 PTTYMNTTGRQVGPLAKFYSVAPEDLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSISQA 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP ++L+ F + A+ ++ + G E ++LL +GL E+
Sbjct: 122 IGTRDYLRVRLGIGRPPGRQDPADYVLKPFPSAAKADVELLIGNGAEAVELLARQGL-EA 180
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 181 AQ--NTVHAW 188
>gi|427712938|ref|YP_007061562.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 6312]
gi|427377067|gb|AFY61019.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 6312]
Length = 205
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 20/194 (10%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFV-GDAPVLL 75
P L VGLGNPG+KY TRHN+GF +IDA A++ IS+ + G+G + G + L
Sbjct: 7 PQLIVGLGNPGEKYAQTRHNIGFRVIDALAQAWHISLTSQSKFHGLLGEGIIPGQGKIRL 66
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + +YKLPLN +LV +DD L G +R+R +G GGHNG++S++
Sbjct: 67 LKPTTYMNQSGQSLRAVLDWYKLPLNSILVIYDDADLALGRVRIRLSGSAGGHNGMRSII 126
Query: 136 ----------------NNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
N FR + P D ++L F++ + + L V +
Sbjct: 127 SHGGSEEFPRLRVGIANEFRLNQKGP--RDAVPYVLANFSSDDLKLLPDVLDLAVAAVTA 184
Query: 180 LLSKGLTESARHFN 193
+ +G+ +S +N
Sbjct: 185 CVQRGVEQSMNLYN 198
>gi|406027394|ref|YP_006726226.1| peptidyl-tRNA hydrolase, PTH1 family [Lactobacillus buchneri CD034]
gi|405125883|gb|AFS00644.1| peptidyl-tRNA hydrolase, PTH1 family [Lactobacillus buchneri CD034]
Length = 186
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 77/116 (66%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y GTRHN GF +++ FA+S IS+ T A +G GFV + V++ +P
Sbjct: 3 MIVGLGNIGPQYDGTRHNTGFMVVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVEPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
T+MN SG + PL Y+ + + +++ HDDM LP G +R++ G GGHNG+KS++
Sbjct: 63 TFMNDSGLAVRPLMDYFDVSIEDLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSII 118
>gi|261855770|ref|YP_003263053.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
gi|261836239|gb|ACX96006.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
Length = 194
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 100/187 (53%), Gaps = 14/187 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQG--ISMNT-VHCKATFGQGFVGDAPVLLA 76
L VGLGNPG KY+ TRHN GF ID A G +S +T HC+ + FV L
Sbjct: 5 LIVGLGNPGSKYESTRHNAGFWFIDELARHWGGHLSSDTKFHCEML--RIFVKQVDRRLI 62
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM- 135
KPQT+MNLSG+S +A +YK+P +LV HD++ L G ++L+ G HGGHNGLK +
Sbjct: 63 KPQTFMNLSGKSVAAVANFYKIPAESILVVHDELDLLPGKMKLKIGGSHGGHNGLKDIQA 122
Query: 136 -----NNFR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
N +R GIG P + F+L A R ID +++ V + LL +
Sbjct: 123 QLGTPNFWRLRIGIGHPGHRDQVVGFVLTNPPASERTLIDASIRHAVNEIDALLDIDPEK 182
Query: 188 SARHFNT 194
S + N
Sbjct: 183 STQRINA 189
>gi|302871261|ref|YP_003839897.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
gi|302574120|gb|ADL41911.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
Length = 207
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPGD+Y TRHNVGF ID A+ ++ + K G VLL KP
Sbjct: 21 YIIAGLGNPGDRYTFTRHNVGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 80
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SGES +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 81 MTYMNASGESIIEAVNFYKIKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL 140
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P + D ++L +F +E+I A+++ +K+LL + +
Sbjct: 141 GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRAM 198
Query: 190 RHFN 193
+ N
Sbjct: 199 NYIN 202
>gi|315640550|ref|ZP_07895658.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
gi|315483754|gb|EFU74242.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
Length = 192
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 9/165 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HNVGF ++D A + +A F +LL KPQ
Sbjct: 3 MIVGLGNPGKKYEQTKHNVGFMVVDQIANQENSVFKKTAFEAEVADFFSNGEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYFGVYPEELVVVYDDLDLQVGKIRLRQKGSAGGHNGIKSIISHLD 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
GIGRP G+ +L F+ + I + +GV+
Sbjct: 123 SQTFKRVKVGIGRPKGKQTVVQHVLSPFDKVDAPLIQEGIAQGVD 167
>gi|331701923|ref|YP_004398882.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
gi|329129266|gb|AEB73819.1| Peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
Length = 186
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 77/116 (66%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y GTRHN GF +++ FA+S IS+ T A +G GFV + V++ +P
Sbjct: 3 MIVGLGNIGPQYDGTRHNTGFMVVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVEPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
T+MN SG + PL Y+ + + +++ HDDM LP G +R++ G GGHNG+KS++
Sbjct: 63 TFMNDSGLAVRPLMDYFDVSIEDLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSII 118
>gi|399523773|ref|ZP_10764379.1| aminoacyl-tRNA hydrolase [Atopobium sp. ICM58]
gi|398375191|gb|EJN52638.1| aminoacyl-tRNA hydrolase [Atopobium sp. ICM58]
Length = 200
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVGD 70
PWL VGLGNPG +Y TRHNVG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYASTRHNVGYLTLDVLASRDGATLTSHRSRTHTADVRLGIGPGGVPG 65
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V+LA+ +YMN SG LA+++K+ +R+LV HDDM LP LRL+ GG GGHNG
Sbjct: 66 PRVILARSDSYMNTSGGPISALASFHKIEPSRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
LKS+ + G+GRPPG+MDP ++L + R D ++ +V++ ++
Sbjct: 126 LKSLTQHLGTRDYARLRIGVGRPPGRMDPADYVLAALPSKERPDWDVTFEQAADVVEDIV 185
Query: 182 SKGLTESARHFNT 194
+KG + +T
Sbjct: 186 TKGFAPTQMALHT 198
>gi|187251695|ref|YP_001876177.1| aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
gi|226723254|sp|B2KE94.1|PTH_ELUMP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186971855|gb|ACC98840.1| Aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
Length = 187
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN GF ++D A G++ N + + +G V LAKP
Sbjct: 4 LIVGLGNPGPQYAVTRHNAGFMIVDNLAVKLGVNFNAYKNLGEYVKTTIGGQDVFLAKPL 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSG LA +YK+ +LV DD+ + G +R+R +G GG NG+K+++ F
Sbjct: 64 TFMNLSGRMVTHLAGFYKIKPQEILVCFDDISINLGAVRIRKDGSAGGQNGMKNIIELFG 123
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G P + D ++L KF+ + ++ +++ VE + + GL +
Sbjct: 124 TQDIPRLRFGVGPKPERFDSADYVLSKFSKSDEKLLNESIEAAVEAAESCVKDGLERAMN 183
Query: 191 HFN 193
FN
Sbjct: 184 KFN 186
>gi|289449607|ref|YP_003474745.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184154|gb|ADC90579.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 192
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY T HN GF ++ A+ I + T K+ G+G + P LL PQ
Sbjct: 6 VIVGLGNPGPKYCRTWHNCGFMALEYLAQKYDIPIRTAKHKSLIGKGIIVGKPTLLVCPQ 65
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSGE+ + +YKLPL+++++ +DD+ LP G RLR G G HNG++S++
Sbjct: 66 TFMNLSGEAVRAIRDFYKLPLDKIMIVYDDLDLPVGATRLRLQGSAGTHNGMRSIVQQLG 125
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIG P + ++L K + + A++ L+ LS + + R
Sbjct: 126 SGDFPRMRLGIGPKPEYLPLVDYVLSKVGKAQEKPLFAAIEHAAAGLEAWLSGDIDSAMR 185
Query: 191 HFN 193
N
Sbjct: 186 LSN 188
>gi|94971564|ref|YP_593612.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
gi|94553614|gb|ABF43538.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
Length = 228
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T HN+GF +D AE GI + +CKA G+G + V+LAKP+
Sbjct: 30 LIVGLGNPGMQYQFTPHNLGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKPE 89
Query: 80 TYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG S L + ++ + ++V +DD+ LP G +R+R G GGHNG++S++
Sbjct: 90 TYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGAL 149
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GI D +++L + +D AL + E +K++L +G +
Sbjct: 150 DTQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGPAM 209
Query: 190 RHFN 193
FN
Sbjct: 210 NRFN 213
>gi|312144319|ref|YP_003995765.1| peptidyl-tRNA hydrolase [Halanaerobium hydrogeniformans]
gi|311904970|gb|ADQ15411.1| peptidyl-tRNA hydrolase [Halanaerobium hydrogeniformans]
Length = 185
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG+KY TRHN+GF + A+ ++ ++ +G F +++ +P
Sbjct: 3 VIAGLGNPGEKYARTRHNIGFMITAELAKKYSVN-SSYKFDGLYGDYFFAGEKIIIFQPM 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
YMN SG+ L YY + L +LV HDD+ L G +R + NG GGHNG+KS++N
Sbjct: 62 KYMNRSGQPIAKLLRYYDIELEDLLVIHDDLDLDLGKIRFKRNGSSGGHNGIKSIINRLD 121
Query: 137 --NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F+ G+GRPPG + ++L F ++ + V ++L+L + + +
Sbjct: 122 SKDFKRLKVGVGRPPGNIPVSDYVLTTFQGEEKKIASEVIDRSVSAVELMLKEDIVRAMN 181
Query: 191 HFN 193
+N
Sbjct: 182 MYN 184
>gi|425461201|ref|ZP_18840681.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9808]
gi|389826004|emb|CCI23853.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9808]
Length = 208
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVL- 74
P L +GLGNP KY TRHN+GFE +D+ A G+S F QGF+ GD+P+L
Sbjct: 12 PQLIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLLG 67
Query: 75 ---LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG+
Sbjct: 68 KIRLLKPQTYMNRSGQSVRAVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGI 127
Query: 132 KSVM-----NNFRGIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS++ NF + G+ KA + L +F E I L + ++L L +
Sbjct: 128 KSMIAHVGTENFARLRIGIGKSTEKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQ 187
Query: 184 GLTESARHFN 193
GL ++ +N
Sbjct: 188 GLQKAMSLYN 197
>gi|227891597|ref|ZP_04009402.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
gi|227866744|gb|EEJ74165.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
Length = 200
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G KY+GTRHNVGF +++ F E G + N + + F+ +++ KP
Sbjct: 18 MIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPT 77
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 78 TYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHVG 137
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GI P +M ++L +F ++D L V L E+
Sbjct: 138 TEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAAL-----DDWIENDD 191
Query: 191 HFNTIQKY 198
NT+ ++
Sbjct: 192 FMNTMNRF 199
>gi|119390906|sp|Q1IHW2.2|PTH_ACIBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 201
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ T HN+GF +D AE GI + +CKA G+G + V+LAKP+
Sbjct: 3 LIVGLGNPGMQYQFTPHNLGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG S L + ++ + ++V +DD+ LP G +R+R G GGHNG++S++
Sbjct: 63 TYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGAL 122
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GI D +++L + +D AL + E +K++L +G +
Sbjct: 123 DTQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGPAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NRFN 186
>gi|417809763|ref|ZP_12456444.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius GJ-24]
gi|335350687|gb|EGM52183.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius GJ-24]
Length = 200
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G KY+GTRHNVGF +++ F E G + N + + F+ +++ KP
Sbjct: 18 MIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPT 77
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 78 TYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHVG 137
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GI P +M ++L +F ++D L V L E+
Sbjct: 138 TEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAAL-----DDWIENDD 191
Query: 191 HFNTIQKY 198
NT+ ++
Sbjct: 192 FMNTMNRF 199
>gi|46579984|ref|YP_010792.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120602604|ref|YP_967004.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|387153574|ref|YP_005702510.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
gi|68052972|sp|Q72BR1.1|PTH_DESVH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199329|sp|A1VDR1.1|PTH_DESVV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46449400|gb|AAS96051.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120562833|gb|ABM28577.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|311234018|gb|ADP86872.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 28/200 (14%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDA---------FAESQGIS-----MNTVHCKATFGQ 65
L +GLGNPG +Y TRHN GF IDA FA + +S + C GQ
Sbjct: 6 LIIGLGNPGREYDRTRHNFGFMFIDALLEEAQRNPFARCEQLSGGKKKYDLWRCDIVEGQ 65
Query: 66 GFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
AP LLAKPQT+MNLSGE+ +A++Y++ ++V HD++ LP G +R + GG+
Sbjct: 66 -----APWLLAKPQTFMNLSGEAVLAIASFYRVKPAAMVVAHDELDLPLGRMRFKMGGGN 120
Query: 126 GGHNGLKSVMN-----NFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
GHNGLKS+ +F GIG+PP + ++L +F+ +D L+ ++
Sbjct: 121 AGHNGLKSITQCLGTPDFHRLRLGIGKPPAGGETTGWVLGRFSQSDTAMVDAVLEAAIQG 180
Query: 177 LKLLLSKGLTESARHFNTIQ 196
++ ++G + ++ N +
Sbjct: 181 IRTFATEGDVAATQYINAFR 200
>gi|37520107|ref|NP_923484.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
gi|46576719|sp|Q7NN75.1|PTH_GLOVI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|35211099|dbj|BAC88479.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
Length = 198
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIS-MNTVHCKATFGQGFVGDAPVLLAKP 78
LFVGLGNPG +Y TRHN GF +DA A+ S + K +G +L KP
Sbjct: 5 LFVGLGNPGLQYTQTRHNAGFLAVDALAKRWQCSWVEKSRFKGYLAEGAGPGGRAILLKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SG+S +A Y++LP ++LV +D++ LP G +RLR G GHNG+KS++
Sbjct: 65 TTYMNHSGQSVRAVADYFRLPPQQLLVLYDEVALPLGKIRLRPEGSAAGHNGIKSLIEHL 124
Query: 136 --NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
N F GIGR P ++L KF +E++ L VE ++ +L+KGL ++
Sbjct: 125 GTNQFARLRIGIGREPPPPVLTNYVLGKFAPEEQEQLPAILDGCVEAVEAVLAKGLEKAM 184
Query: 190 RHFNT 194
+N
Sbjct: 185 SIYNA 189
>gi|327399266|ref|YP_004340135.1| peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
gi|327181895|gb|AEA34076.1| Peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
Length = 193
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 13/189 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAK 77
WL VGLGNPG +Y T HNVGF + D+ + + K FG+ +G V + K
Sbjct: 3 WLVVGLGNPGKEYALTPHNVGFMVCDSLSFLFDFDFTLKNKFKGFFGEFSLGSYKVGVLK 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMNLSG S G + ++YK+PLNR++V HDD+ LP G ++++ N GGH G++S++
Sbjct: 63 PITYMNLSGISVGEVFSFYKIPLNRLIVIHDDVDLPLGRIKIKKNSSSGGHKGVESIIQT 122
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+GR D ++L+ F E ++ A++ + + ++ +GL ++
Sbjct: 123 LSSKDFARVKIGVGREGNVRD---YVLRNFKENELEIVNQAVRLSADAVVCIIKEGLNKA 179
Query: 189 ARHFNTIQK 197
+N++ +
Sbjct: 180 MNEYNSLNR 188
>gi|51854332|gb|AAU10712.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 154
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 78/126 (61%), Gaps = 28/126 (22%)
Query: 88 STGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG--------LKSVMNNFR 139
GPLAAYYKLPLNRVLV D LPCG+LRL+ GG G HNG V+ + +
Sbjct: 29 EVGPLAAYYKLPLNRVLVAFDGTDLPCGILRLQPKGGFGRHNGSVDFVTMCFNEVICHSK 88
Query: 140 GIGRPPGQMDPKAFLLQKFNAIARER--------------------IDTALQEGVEVLKL 179
GIG PPGQMDPKAF+LQKFN + ER ID+A++EGVE+LKL
Sbjct: 89 GIGCPPGQMDPKAFVLQKFNKTSLERIHMTNSLKPWLYPAYVKTLKIDSAIEEGVEILKL 148
Query: 180 LLSKGL 185
+++KGL
Sbjct: 149 VVTKGL 154
>gi|169347360|ref|ZP_02866298.1| hypothetical protein CLOSPI_00075 [Clostridium spiroforme DSM 1552]
gi|169293977|gb|EDS76110.1| aminoacyl-tRNA hydrolase [Clostridium spiroforme DSM 1552]
Length = 184
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y GTRHN GF +ID A + ++ K + + ++L KPQ
Sbjct: 3 LIVGLGNPGKEYAGTRHNCGFMVIDHLASKLNVDVDQNKFKGLYAKVKYHGEDIILLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGES + ++K+ +LV +DD+ +P G LRLR G GGHNG+K+++
Sbjct: 63 TYMNLSGESVNAVMNFFKIDKEDLLVIYDDLDMPVGKLRLRKTGSAGGHNGIKNIIAHLN 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
+F+ GI R M+ ++L +F+ + E I+ ++ + L +
Sbjct: 123 SQDFKRIRVGIDRHK-YMNVADYVLSRFSKVESEAIEQGIENAANAVLDYLDNDFNHAMN 181
Query: 191 HFN 193
++N
Sbjct: 182 YYN 184
>gi|357040090|ref|ZP_09101880.1| Peptidyl-tRNA hydrolase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357070|gb|EHG04849.1| Peptidyl-tRNA hydrolase [Desulfotomaculum gibsoniae DSM 7213]
Length = 191
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY TRHN GF +D AE ++ ++ GQG ++LAKPQ
Sbjct: 3 LVVGLGNPGSKYALTRHNAGFMAVDRLAERLDTPVDRNFLRSLVGQGVWAGEKIILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSG++ L +YKL ++V +DD+ LP G LR+R G GGH GL S++N
Sbjct: 63 TYMNLSGQAVVALLNWYKLAPADLIVIYDDLDLPPGRLRIRDRGSAGGHRGLASIINLLG 122
Query: 139 --------RGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPP A ++L + + E I L+ V++ ++ G+ +
Sbjct: 123 TGDFIRVRIGIGRPPVPGPEVADWVLARPASEDMEAIHRVLETVPGVVEEIVRAGVVSAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NKFN 186
>gi|268318832|ref|YP_003292488.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
gi|262397207|emb|CAX66221.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
Length = 185
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 8/166 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG KY T+HN GF +D + E G++++ + + + + V+ +PQ
Sbjct: 3 LIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLEPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG+S +A ++K+ +LV HDDM +P G +R+R NG GGHNG+KS+M
Sbjct: 63 TFMNDSGKSIAQVANFFKIKPEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACLG 122
Query: 136 -NNFR--GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
NNF IG R P +++L FN ++ +DTA + V+
Sbjct: 123 TNNFNRLKIGIRHPKNESVVSWVLSPFNNDQQKLMDTAFETSENVI 168
>gi|329122082|ref|ZP_08250690.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
gi|327466889|gb|EGF12405.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
Length = 194
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF++++ F+ +S+ + ++ AKPQ
Sbjct: 7 LIVGLGNPGKEYEKTRHNIGFDVLELFSHRNKLSLWKNFMNSEIVTVMNNGEKIIFAKPQ 66
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMN SGES G +A YYK+ + V DD+ LP G +R+R G GGHNGLKS+M + +
Sbjct: 67 TYMNNSGESIGDIAKYYKIEPEDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMAHLQ 126
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIG P +L + ++I+ A ++ E ++ L + + ++
Sbjct: 127 SENFCRFRVGIGHPKNGHTVIEHVLGRPYGEDIKKIEEAEEKVAESIEFALKENIDKAMN 186
Query: 191 HFN 193
+FN
Sbjct: 187 YFN 189
>gi|428775477|ref|YP_007167264.1| peptidyl-tRNA hydrolase [Halothece sp. PCC 7418]
gi|428689756|gb|AFZ43050.1| peptidyl-tRNA hydrolase [Halothece sp. PCC 7418]
Length = 193
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 11/186 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGD-APVLLAK 77
L VGLGNPG+KY TRHN+GF+++D A+ + + K + +G V + L K
Sbjct: 6 LIVGLGNPGEKYDKTRHNIGFDVVDRLAKDWQLDWRDNNRFKGEYCEGAVPRMGKMRLLK 65
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMN SG++ + +YK VL+ +DD+ LP G LRLR +G GGHNG+KS++++
Sbjct: 66 PNTYMNHSGQAVRAVCDWYKFSPESVLIIYDDLDLPVGRLRLRLSGSAGGHNGMKSIISH 125
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GI + G D +L KF+ + ID AL+ EV++ L+ GL ++
Sbjct: 126 LGTDKFPRLRIGIKKTDGAKDTIGHVLGKFSPEEQPYIDEALKVAPEVVEKALTDGLEKA 185
Query: 189 ARHFNT 194
+N
Sbjct: 186 MSLYNA 191
>gi|301300312|ref|ZP_07206519.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|417787490|ref|ZP_12435173.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius NIAS840]
gi|418961004|ref|ZP_13512891.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius SMXD51]
gi|300852085|gb|EFK79762.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|334307667|gb|EGL98653.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius NIAS840]
gi|380344671|gb|EIA33017.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius SMXD51]
Length = 185
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 15/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G KY+GTRHNVGF +++ F E G + N + + F+ +++ KP
Sbjct: 3 MIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 63 TYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHVG 122
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GI P +M ++L +F ++D L V L + E+
Sbjct: 123 TEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----ENDD 176
Query: 191 HFNTIQKY 198
NT+ ++
Sbjct: 177 FMNTMNRF 184
>gi|227888874|ref|ZP_04006679.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
gi|227850567|gb|EEJ60653.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
Length = 185
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG KY T+HN GF +D + E G++++ + + + + V+ +PQ
Sbjct: 3 LIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLEPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG+S +A ++K+ +LV HDDM +P G +R+R NG GGHNG+KS+M
Sbjct: 63 TFMNDSGKSIAQVANFFKIKPEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACLG 122
Query: 136 -NNFRGIG---RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
NNF + R P +++L FN ++ +DTA + V+
Sbjct: 123 TNNFNRLKIGIRHPENESVVSWVLSPFNNDQQKLMDTAFETSENVI 168
>gi|410582392|ref|ZP_11319498.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
gi|410505212|gb|EKP94721.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
Length = 208
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
P + VGLGNPG +Y+GTRHNVGF ++DA A + ++ + +G PV+L K
Sbjct: 2 PRIIVGLGNPGPEYEGTRHNVGFAVVDALARRLRTAGWRRGFRSLWAEGTWRGQPVVLLK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
PQTYMNLSGE+ ++P VLV +DD+ LP G LRLR G GGH G+ S++ +
Sbjct: 62 PQTYMNLSGEAVAQACRNLRVPPGEVLVIYDDLDLPPGHLRLRPRGSAGGHRGVASIIAS 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKF 158
GIGRPP +D ++L F
Sbjct: 122 LGRDDFPRLRVGIGRPPAGVDAADYVLAPF 151
>gi|385840862|ref|YP_005864186.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
gi|300214983|gb|ADJ79399.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
Length = 185
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 15/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G KY+GTRHNVGF +++ F E G + N + + F+ +++ KP
Sbjct: 3 MIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLIAELFINGEKIIVIKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 63 TYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHVG 122
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GI P +M ++L +F ++D L V L + E+
Sbjct: 123 TEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----ENDD 176
Query: 191 HFNTIQKY 198
NT+ ++
Sbjct: 177 FMNTMNRF 184
>gi|379726859|ref|YP_005319044.1| peptidyl-tRNA hydrolase [Melissococcus plutonius DAT561]
gi|376317762|dbj|BAL61549.1| peptidyl-tRNA hydrolase [Melissococcus plutonius DAT561]
Length = 188
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF +D A + N +A F+ ++L KP
Sbjct: 3 MIVGLGNPGTKYQATKHNIGFITLDEIATRYKVDFNKNQFEAVTTDFFIDSEKIMLIKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG S GPL YY L L+ +++ +DD+ LP G +R+R G GGHNG+KS++
Sbjct: 63 TYMNESGRSIGPLVDYYGLNLSDLIIIYDDLDLPVGKVRVRAKGSAGGHNGIKSLIAHLG 122
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE-VLKLLLSKGLTESA 189
N+F GI RP +L F I A++ + + + S + ++
Sbjct: 123 TNDFTRIKVGISRPENNDTVIHHVLSAFKKEQHIEIQKAIKTAADAAIYMCSSHTVIDAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NQFN 186
>gi|293375930|ref|ZP_06622191.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325838695|ref|ZP_08166610.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
gi|292645452|gb|EFF63501.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325490745|gb|EGC93052.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
Length = 186
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 15/185 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKP 78
LFVGLGNPG KY+ TRHN GF +IDA ++ I + + K G+G V V+L KP
Sbjct: 3 LFVGLGNPGSKYERTRHNAGFMVIDALSKEWNIELTDEKKFKGQIGRGVVKGEKVILLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSGES + +Y + + ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TTFMNLSGESVRAVMDFYDIDIEDLVVIYDDLDLPHGKIRLRLKGSAGGHNGIKSLIAHV 122
Query: 139 R---------GIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLKLLLSKGL 185
+ GI R P ++ ++L KF A+ + ID A+ L +K +
Sbjct: 123 KTQEFKRIRVGIDRHP-KIPVVDYVLGKFTEDELALVNQAIDLAVGACTLALTDSFNKVM 181
Query: 186 TESAR 190
TE ++
Sbjct: 182 TEYSK 186
>gi|73663563|ref|YP_302344.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418577117|ref|ZP_13141244.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|119391016|sp|Q49V11.1|PTH_STAS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72496078|dbj|BAE19399.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379324397|gb|EHY91548.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 190
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE+ID E S++ K + + V+ +P T
Sbjct: 4 IVGLGNIGKRFEQTRHNIGFEVIDFMLEQNRFSLDKQKFKGAYTIERLAGEKVMFIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ PL YY + + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVAPLMKYYDIDIEDLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQMLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+ RP M ++LQKF+ E ++ ++ ++ + ES R
Sbjct: 124 DQFKRIRIGVDRPSNGMAIVDYVLQKFSNQEMETMNKVIEHSARAIEAYI-----ESNRF 178
Query: 192 FNTIQKY 198
+ +Y
Sbjct: 179 DRVMNEY 185
>gi|354568542|ref|ZP_08987706.1| Peptidyl-tRNA hydrolase [Fischerella sp. JSC-11]
gi|353540265|gb|EHC09742.1| Peptidyl-tRNA hydrolase [Fischerella sp. JSC-11]
Length = 216
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 104/197 (52%), Gaps = 15/197 (7%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GD 70
T + P L VGLGNP KY TRHN+GF +D + S I + + +G+G +
Sbjct: 8 TTLVIPQLIVGLGNPEPKYDQTRHNIGFAALDVLSRSWQIPLAENRKFQGEYGEGIAPTN 67
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
+ L KP TYMN SG++ + +YKLP VLV +DDM LP G RLR +G GGHNG
Sbjct: 68 DKIRLLKPLTYMNRSGQAIQAVTNWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHNG 127
Query: 131 LKSVM-----NNFR----GIGRPPGQM----DPKAFLLQKFNAIARERIDTALQEGVEVL 177
+KS + NF GIGRP G + +++L KF+ + + L E +
Sbjct: 128 MKSAIAHLGTQNFPRLRIGIGRPKGATNGDENTVSYVLGKFSTTETKFVSEVLNFVCECV 187
Query: 178 KLLLSKGLTESARHFNT 194
+L L +G+ ++ N+
Sbjct: 188 ELCLKQGVEKAMNRCNS 204
>gi|56751295|ref|YP_171996.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81299038|ref|YP_399246.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
gi|68052884|sp|Q5N2J4.1|PTH_SYNP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391026|sp|Q31RR0.1|PTH_SYNE7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56686254|dbj|BAD79476.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81167919|gb|ABB56259.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
Length = 208
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 27/187 (14%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFV-GDAPVL 74
RP L VGLGNPG KY TRHN+GF +ID A+ G+ ++ + +G+ V G +
Sbjct: 5 RPTLLVGLGNPGQKYAETRHNIGFMLIDRLAQDWGVKLSEDRKFQGEYGETAVPGLGKIR 64
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KP T+MN SG S + +YKL ++LV +DDM LP G LRLR +G G HNG+KS+
Sbjct: 65 LLKPTTFMNQSGRSLRAVLDWYKLTPQQILVIYDDMDLPLGRLRLRQSGSAGTHNGMKSI 124
Query: 135 MNNFR---------GIGRPPGQMDPK----------------AFLLQKFNAIARERIDTA 169
+++ GI P Q + + LL++ +A+E +TA
Sbjct: 125 ISHLSSKDFPRLRLGISLPRSQSNDRHDATVSHVLGKFAVSEQSLLKQVLDLAQEATETA 184
Query: 170 LQEGVEV 176
L+ GVE
Sbjct: 185 LRSGVET 191
>gi|7388025|sp|O85235.1|PTH_LACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3511016|gb|AAD03811.1| unknown [Lactobacillus sakei]
Length = 177
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 12/172 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY T+HN+GF +ID E +++N +A +G VLL KP
Sbjct: 3 MIVGLGNPGSKYAKTKHNIGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG S GPL +YY++ ++ +LV DDM L G LRLR G GGHNG+KS++ + +
Sbjct: 63 TFMNDSGRSVGPLMSYYQVGIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIAHTK 122
Query: 140 G-------IG-RPPGQMDPKAFLLQKFNA----IARERIDTALQEGVEVLKL 179
IG + P + ++L F+ + + ID A +E +K+
Sbjct: 123 SQTFKRLKIGIQHPQKSTVVNWVLTPFDKDGAPVINQAIDQACEESTTGVKM 174
>gi|309812802|ref|ZP_07706540.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
gi|308433219|gb|EFP57113.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
Length = 210
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 110/191 (57%), Gaps = 16/191 (8%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP- 72
A +PWL VGLGNPG +Y G RHNVG +++ A G+++ +A + +G P
Sbjct: 13 ARTQPWLVVGLGNPGPRYAGNRHNVGAMVVERMAADAGVALRAHKARAAAAEIRLGTLPG 72
Query: 73 ------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHG 126
V+LA P TYMN SG L ++K+P R++V HD++ + G +RL+ GG G
Sbjct: 73 GLPGPKVVLAVPSTYMNESGGPVSALMKFFKIPAERLVVIHDELDIDFGAVRLKFGGGEG 132
Query: 127 GHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
GHNGL+S+ + GIGRPPG+M+ F+L+ F+A R +D + G E +
Sbjct: 133 GHNGLRSISKSIGTKDYLRVRLGIGRPPGRMEVSDFVLKDFSATERRELDFLIPSGAEAV 192
Query: 178 KLLLSKGLTES 188
+LL+ +GL ++
Sbjct: 193 ELLVHRGLDDA 203
>gi|403713195|ref|ZP_10939327.1| peptidyl-tRNA hydrolase [Kineosphaera limosa NBRC 100340]
gi|403212546|dbj|GAB94010.1| peptidyl-tRNA hydrolase [Kineosphaera limosa NBRC 100340]
Length = 196
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 16/192 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV----- 73
WL VGLGNPG KY G RHNVG ++ A G++++ +A+ G +G AP
Sbjct: 4 WLVVGLGNPGPKYAGNRHNVGAMVVAELARRGGVTLSRHKTRASAGSVRLGTAPGGAPGP 63
Query: 74 --LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
++A P +YMN SG L YY P +R++V HD++ +P G +RL+ GG GGHNGL
Sbjct: 64 PAIVAVPSSYMNESGGPVSGLLQYYSCPTDRLVVVHDELDIPFGQVRLKRGGGEGGHNGL 123
Query: 132 KSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+S+ N+ GIGRPPG+MD F+L+ F+ R+ + L + + +++L
Sbjct: 124 RSISNSLGTRDYLRVRVGIGRPPGRMDAADFVLRDFSPTDRKELPFLLDDAADAVEMLAD 183
Query: 183 KGLTESARHFNT 194
GLT + + F+
Sbjct: 184 SGLTSAQQRFHA 195
>gi|282882227|ref|ZP_06290866.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
gi|281297992|gb|EFA90449.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
Length = 192
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG Y+ T+HN+GF +D AE ++MN + K G+ +G ++L KP
Sbjct: 5 FVIAGLGNPGKDYEKTKHNIGFSTVDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGES +YK+ + ++V DD+ + G L+++ G G HNGLKS++N+
Sbjct: 65 QTFMNNSGESIRMCLDFYKVDVKNLIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVNHL 124
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+ D F+L F++ + ID A + ++ KG+ +
Sbjct: 125 SSKSFPRIKVGIGQKKEGEDLANFVLSNFSSNDAKHIDKATDAARDAAIDIVEKGIEYTM 184
Query: 190 RHFN 193
+N
Sbjct: 185 NAYN 188
>gi|417643151|ref|ZP_12293212.1| aminoacyl-tRNA hydrolase [Staphylococcus warneri VCU121]
gi|445060521|ref|YP_007385925.1| peptidyl-tRNA hydrolase [Staphylococcus warneri SG1]
gi|330686062|gb|EGG97684.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU121]
gi|443426578|gb|AGC91481.1| peptidyl-tRNA hydrolase [Staphylococcus warneri SG1]
Length = 190
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE+ID E +++ K + + VLL +P T
Sbjct: 4 IVGLGNIGKRFELTRHNIGFEVIDYILERHNFTLDKQKFKGAYTIERMNGDKVLLIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVAPLMDYYNIDVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKMLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+GRP M ++LQ+F+ ++ ++ ++ + E++R
Sbjct: 124 DQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMTTMEKVIEHSANAVEAFI-----ETSRF 178
Query: 192 FNTIQKY 198
N + +Y
Sbjct: 179 DNVMNEY 185
>gi|417091647|ref|ZP_11956453.1| peptidyl-tRNA hydrolase [Streptococcus suis R61]
gi|353532953|gb|EHC02621.1| peptidyl-tRNA hydrolase [Streptococcus suis R61]
Length = 189
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 15/187 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLA 76
L +GLGNPGD+Y T+HNVGF ++D A+ + ++ + H K A F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFS--HDKIFQADIATTFIDGEKIYLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP T+MN SG++ L AYY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 62 KPTTFMNESGKAVHALMAYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVK 121
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIGRP G+M +L F+ R ID AL + + + + L + +
Sbjct: 122 HIGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFD 181
Query: 188 SA-RHFN 193
+ R FN
Sbjct: 182 TIMRKFN 188
>gi|343925285|ref|ZP_08764812.1| peptidyl-tRNA hydrolase [Gordonia alkanivorans NBRC 16433]
gi|343764882|dbj|GAA11738.1| peptidyl-tRNA hydrolase [Gordonia alkanivorans NBRC 16433]
Length = 189
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
+ VGLGNPG KY+ TRHNVG + D +S G VH K A + +G VL+AK
Sbjct: 4 IVVGLGNPGSKYEKTRHNVGAMVADGLVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVAK 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+ YMN SG GPLA +Y + ++V HD++ + G++RL+ GG GGHNGL+S+
Sbjct: 63 PRVYMNESGRQIGPLAKFYSVAPADLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSISQA 122
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F + R ++ ++ G + ++LL+S+ L ES
Sbjct: 123 IGTRDYLRVRMGIGRPPGRQDPADFVLKPFPSADRAEVELMIRNGCDAIELLVSQDL-ES 181
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 182 AQ--NTVHAW 189
>gi|400753342|ref|YP_006561710.1| peptidyl-tRNA hydrolase Pth [Phaeobacter gallaeciensis 2.10]
gi|398652495|gb|AFO86465.1| peptidyl-tRNA hydrolase Pth [Phaeobacter gallaeciensis 2.10]
Length = 252
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY G RHN+GF +D A G S +A +G +G VLL KPQ
Sbjct: 3 LFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQISEGVLGRTKVLLLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSG+S G +YKL V V HD++ L G R++ GGH GHNGL+S+ ++
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVTVLHDELDLAPGKARVKQGGGHAGHNGLRSIHSHIG 122
Query: 140 --------GIGRPPGQMDPKA-FLLQKFNAIARERID 167
GIG PG D A ++L+ F +D
Sbjct: 123 ADYGRVRLGIGH-PGHKDAVAGYVLRDFAKADEAWLD 158
>gi|300813505|ref|ZP_07093847.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512384|gb|EFK39542.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 192
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG Y+ T+HN+GF +D AE ++MN + K G+ +G ++L KP
Sbjct: 5 FVIAGLGNPGKDYEKTKHNIGFSTVDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLKP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGES +YK+ + ++V DD+ + G L+++ G G HNGLKS++N+
Sbjct: 65 QTFMNNSGESIRMCLDFYKVDVKNLIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVNHL 124
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG+ D F+L F++ + ID A + ++ KG+ +
Sbjct: 125 SSKGFPRIKVGIGQKKEGEDLANFVLSNFSSNDAKHIDKATDAARDAAIDIVEKGIEYTM 184
Query: 190 RHFNT 194
+N
Sbjct: 185 NAYNN 189
>gi|399991703|ref|YP_006571943.1| peptidyl-tRNA hydrolase Pth [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|398656258|gb|AFO90224.1| peptidyl-tRNA hydrolase Pth [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 252
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY G RHN+GF +D A G S +A +G +G VLL KPQ
Sbjct: 3 LFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQISEGVLGRTKVLLLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSG+S G +YKL V V HD++ L G R++ GGH GHNGL+S+ ++
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVTVLHDELDLAPGKARVKQGGGHAGHNGLRSIHSHIG 122
Query: 140 --------GIGRPPGQMDPKA-FLLQKFNAIARERID 167
GIG PG D A ++L+ F +D
Sbjct: 123 ADYGRVRLGIGH-PGHKDAVAGYVLRDFAKADEAWLD 158
>gi|268317961|ref|YP_003291680.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|345304241|ref|YP_004826143.1| peptidyl-tRNA hydrolase [Rhodothermus marinus SG0.5JP17-172]
gi|262335495|gb|ACY49292.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|345113474|gb|AEN74306.1| peptidyl-tRNA hydrolase [Rhodothermus marinus SG0.5JP17-172]
Length = 194
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN GF ++D AE GI+ + + G G + P L KP
Sbjct: 6 LIVGLGNPGPRYANTRHNAGFMVVDRLAERYGIAWRSEKGPSLLGWGQLEGCPAGLMKPL 65
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMN SG + + YY++PL R+LV +DD+ LP G +RLR G GGHNG++ ++
Sbjct: 66 TYMNRSGAAVAEVVRYYRIPLERLLVVYDDIHLPPGRIRLRPGGSAGGHNGVEDIIRALG 125
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIG + ++L F ID AL+ + +G+ +
Sbjct: 126 TTAFPRLRIGIGSNFERGRQADYVLSPFTREEWPLIDEALERACQAAVTFACEGIEAAMN 185
Query: 191 HFNTIQ 196
+N ++
Sbjct: 186 RYNRVE 191
>gi|81429217|ref|YP_396218.1| peptidyl-tRNA hydrolase [Lactobacillus sakei subsp. sakei 23K]
gi|119390954|sp|Q38V72.1|PTH_LACSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78610860|emb|CAI55912.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Lactobacillus
sakei subsp. sakei 23K]
Length = 185
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 8/166 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY T+HN+GF +ID E +++N +A +G VLL KP
Sbjct: 3 MIVGLGNPGSKYAKTKHNIGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG S GPL +YY++ ++ +LV DDM L G LRLR G GGHNG+KS++ + +
Sbjct: 63 TFMNDSGRSVGPLMSYYQVGIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIAHTK 122
Query: 140 G-------IG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
IG + P + ++L F+ I+ A+ + E +
Sbjct: 123 SQTFKRLKIGIQHPQKSTVVNWVLTPFDKDGAPVINQAIDQACEAI 168
>gi|414154399|ref|ZP_11410718.1| Peptidyl-tRNA hydrolase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454190|emb|CCO08622.1| Peptidyl-tRNA hydrolase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 203
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 97/174 (55%), Gaps = 18/174 (10%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG Y TRHNVGF +ID+ A G ++ KA GQ +G V+LAKPQ
Sbjct: 3 LIVGLGNPGPAYAHTRHNVGFMVIDSLARQLGAEVSKEQHKALVGQAVIGGTRVILAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
TYMNLSG++ L +YKL +LV DD+ LP G LR+R G GG GL++++
Sbjct: 63 TYMNLSGQAVVALMNWYKLTPEDLLVIADDLDLPPGRLRMRKKGSDGGQKGLRNIIELLG 122
Query: 137 -----NFR-GIGRPP-GQMD--------PKAFLLQKFNAIARERIDTALQEGVE 175
R GIGRP G ++ P+A LLQ+ A A E T + EG +
Sbjct: 123 TQEFTRLRLGIGRPVHGAVEYVLGKIAGPEAELLQEAVARAAEAAKTWVLEGTD 176
>gi|221640291|ref|YP_002526553.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides KD131]
gi|254783885|sp|B9KMG1.1|PTH_RHOSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221161072|gb|ACM02052.1| Peptidyl-tRNA hydrolase [Rhodobacter sphaeroides KD131]
Length = 225
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y G RHN+G+ ++A A G + +G +G VLL KP+
Sbjct: 3 LFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S G +YKL V+VFHD++ L G LRL+ GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHAHVG 122
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ---EGVEVL 177
GIG P + A++L F ++ + L+ +G E L
Sbjct: 123 EAYGRVRLGIGHPGHKDAVAAYVLNDFAKADQDWLADLLRGISDGAEAL 171
>gi|70727508|ref|YP_254424.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
gi|119391015|sp|Q4L3F9.1|PTH_STAHJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68448234|dbj|BAE05818.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
Length = 190
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE+ID + S++ K + + VL +P T
Sbjct: 4 IVGLGNIGKRFELTRHNIGFEVIDYILKKHNFSLDKQKFKGAYTIERLNGDKVLFIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ GPL YY + + ++V +DD+ L G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVGPLMDYYNVEVEDLIVLYDDLDLSQGQIRLRQKGSAGGHNGMKSIIKHLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+GRP M ++LQKF+ +D ++ ++ + ES+R
Sbjct: 124 DQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMITMDKVIEHSAHAVEAFI-----ESSRF 178
Query: 192 FNTIQKY 198
+ + +Y
Sbjct: 179 DHVMNQY 185
>gi|406667824|ref|ZP_11075576.1| Peptidyl-tRNA hydrolase [Bacillus isronensis B3W22]
gi|405384339|gb|EKB43786.1| Peptidyl-tRNA hydrolase [Bacillus isronensis B3W22]
Length = 191
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG Y+ TRHN+GF++ID A +N + + V+L KP
Sbjct: 7 LIIGLGNPGKPYEHTRHNIGFDVIDELANRWNAPLNQTKFNGMYATVHRPEGKVILLKPL 66
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMNLSGE PL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++
Sbjct: 67 TYMNLSGECVRPLMDYFDIEIEDIIVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQHLG 126
Query: 136 ----NNFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
N R G+ RPP M ++L KF+ + + A+++ + ++ L+K E
Sbjct: 127 TQEFNRIRVGVSRPPAGMKVADYVLAKFSKEDQPIVKEAVEKSCDAVETALTKPFLEVMN 186
Query: 191 HFN 193
FN
Sbjct: 187 KFN 189
>gi|332559292|ref|ZP_08413614.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides WS8N]
gi|429206043|ref|ZP_19197311.1| Peptidyl-tRNA hydrolase [Rhodobacter sp. AKP1]
gi|332277004|gb|EGJ22319.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides WS8N]
gi|428190764|gb|EKX59308.1| Peptidyl-tRNA hydrolase [Rhodobacter sp. AKP1]
Length = 225
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y G RHN+G+ ++A A G + +G +G VLL KP+
Sbjct: 3 LFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S G +YKL V+VFHD++ L G LRL+ GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHAHVG 122
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ---EGVEVL 177
GIG P + A++L F ++ + L+ +G E L
Sbjct: 123 EAYGRVRLGIGHPGHKDAVAAYVLNDFAKADQDWLADLLRGISDGAEAL 171
>gi|183601452|ref|ZP_02962822.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683507|ref|YP_002469890.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191048|ref|YP_002968442.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196454|ref|YP_002970009.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|384194041|ref|YP_005579787.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384195606|ref|YP_005581351.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis V9]
gi|387820914|ref|YP_006300957.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
B420]
gi|387822591|ref|YP_006302540.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bi-07]
gi|423679574|ref|ZP_17654450.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis BS
01]
gi|254783852|sp|B8DTI5.1|PTH_BIFA0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183219058|gb|EDT89699.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219621157|gb|ACL29314.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249440|gb|ACS46380.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251008|gb|ACS47947.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295794037|gb|ADG33572.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis V9]
gi|345282900|gb|AEN76754.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366041218|gb|EHN17722.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis BS
01]
gi|386653615|gb|AFJ16745.1| Peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
B420]
gi|386655199|gb|AFJ18328.1| Peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bi-07]
Length = 199
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVL 74
WL VGLGNPG KY+ TRHN+GF ++ A+ I A G+G + A V
Sbjct: 6 WLIVGLGNPGAKYRNTRHNMGFMTVNELAKRWSIHFANHKGLADLGKGTMSLNGQTAKVF 65
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KP TYMN SG++ + YY + L+ ++V HDDM L G ++L+ G GGHNG+KS+
Sbjct: 66 LCKPLTYMNDSGQAVQSIREYYHINLDHIVVIHDDMDLEFGRIKLKSGGSAGGHNGIKSI 125
Query: 135 MNNFR---------GIGRPPGQMDPKA----FLLQKFNAIARERIDTALQEGVEVLKLLL 181
G+G D ++L +FNA R+++ L +G + + ++
Sbjct: 126 DRCLHSPDYARVRMGVGHASRSGDAHDNTINWVLGEFNAAQRKQLPEFLADGADAAETIV 185
Query: 182 SKGLTESARHFNT 194
+GLT++ FN
Sbjct: 186 FEGLTKAQDKFNA 198
>gi|304440476|ref|ZP_07400364.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371042|gb|EFM24660.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 190
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG KY+ TRHN+GF ID A+ +G ++ + K+ G+ + V+L KP
Sbjct: 2 FVIVGLGNPGSKYELTRHNIGFLTIDRLAKREGARVDRIKFKSLIGEININGEKVILVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MNLSGE+ + +YK+ L +LV DD+ + LRL+ +G G HNG+KS++ N
Sbjct: 62 QTFMNLSGEAVREVMNFYKVDLKNLLVVVDDIDITPFTLRLKKSGSAGSHNGMKSIIYNL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
G+G ++D ++L F +E+++ + + + + G
Sbjct: 122 NDDKFPRLKVGVGNNERKIDLANYVLSGFEKKDQEKLENIIDASCDAILDFIKHGADYVM 181
Query: 190 RHFNT 194
++N
Sbjct: 182 NNYNN 186
>gi|297568583|ref|YP_003689927.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924498|gb|ADH85308.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 197
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 101/171 (59%), Gaps = 13/171 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG +Y+ TRHNVGF D A+ GIS+ N A G+G + PV+L KP
Sbjct: 3 LLVGLGNPGGEYELTRHNVGFIFTDYLADRHGISLKNEKKWDAEVGRGTLWGQPVMLVKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN- 137
TYMN SG + G +A +++L V+VF D++ LP G RL G GGHNG+KS+M++
Sbjct: 63 LTYMNRSGLAVGKIARFFQLEPTSVVVFQDELDLPLGACRLVQGRGAGGHNGIKSLMDHL 122
Query: 138 -------FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTA---LQEGVEVL 177
FR G+GRPP F+L +F+ + +D L+EGVE+L
Sbjct: 123 ASRDFVRFRIGVGRPPAARAAAGFVLARFSPAELQVVDKLLPFLEEGVEML 173
>gi|383786542|ref|YP_005471111.1| peptidyl-tRNA hydrolase [Fervidobacterium pennivorans DSM 9078]
gi|383109389|gb|AFG34992.1| peptidyl-tRNA hydrolase [Fervidobacterium pennivorans DSM 9078]
Length = 177
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 105/185 (56%), Gaps = 19/185 (10%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG+KY TRHNVGF ++D ++S N ++ + V L KP
Sbjct: 2 IIIGLGNPGEKYANTRHNVGFMVLDRLSKSWKSGPNYLYSDIN-----ISGQKVKLVKPL 56
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSGE + LP + ++V +DD+ LP G +R+R +G GGHNG+KS+++
Sbjct: 57 TYMNLSGE------VFKYLPHDDIIVVYDDLDLPLGRIRIRKDGSAGGHNGIKSIISYIG 110
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
GIG P ++D ++L +F+ E++ + ++ ++ ++S+G+ ++
Sbjct: 111 QDFPRIRIGIGPKPKEIDAANYVLSEFSPEEFEKLRKVIDLTLQAIETIVSEGIDKAMNK 170
Query: 192 FNTIQ 196
+N+IQ
Sbjct: 171 YNSIQ 175
>gi|418016904|ref|ZP_12656463.1| peptidyl-tRNA hydrolase [Streptococcus salivarius M18]
gi|345527597|gb|EGX30905.1| peptidyl-tRNA hydrolase [Streptococcus salivarius M18]
Length = 189
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 17/168 (10%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAKP 78
L VGLGNPG KY TRHNVGF ID A+ G++ + KA F+ D V KP
Sbjct: 4 LVVGLGNPGSKYHETRHNVGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNDEKVYFVKP 63
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 64 TTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAET 123
Query: 136 --NNFR----GIGRPPGQMDPKAFLLQKFNA-------IARERIDTAL 170
F GIGRP M +L KF+ + ++++TAL
Sbjct: 124 GTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETAL 171
>gi|183984443|ref|YP_001852734.1| peptidyl-tRNA hydrolase [Mycobacterium marinum M]
gi|238689227|sp|B2HDJ5.1|PTH_MYCMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183177769|gb|ACC42879.1| peptidyl-tRNA hydrolase Pth [Mycobacterium marinum M]
Length = 191
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 105/182 (57%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG+ Y TRHN+GF + D A G VH + A G +
Sbjct: 1 MAEPLLVVGLGNPGENYARTRHNLGFMVADLLAARLGAKFK-VHKRSGAEVVTGRLAQRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV +F+ GIGRPPG+ DP F+L+ F++ R + T ++ + +LL+
Sbjct: 120 SVAAALGTKDFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVEI 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|443328965|ref|ZP_21057557.1| peptidyl-tRNA hydrolase [Xenococcus sp. PCC 7305]
gi|442791510|gb|ELS01005.1| peptidyl-tRNA hydrolase [Xenococcus sp. PCC 7305]
Length = 201
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 23/203 (11%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD------A 71
P L VGLGNP +Y TRHN+GFE +D+ A++ G S F QG V + +
Sbjct: 7 PELIVGLGNPESRYDQTRHNIGFEAVDSLAKTWGFSWRE---NKRF-QGLVAEGVSPYGS 62
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KP TYMN SG++ + +YK+ + VLV +DDM LP G LR+R +G GGHNG+
Sbjct: 63 KMRLLKPLTYMNRSGQAVRAVIDWYKIAPDSVLVIYDDMDLPVGRLRIRRSGSAGGHNGM 122
Query: 132 KSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
KS++ + GIG+ G+ +L KF ++ I+ L V+ ++ L
Sbjct: 123 KSIIAHLGKQDFPRLRIGIGKSDGKRQTIGHVLGKFAPEEQKVIEEMLDISVKAVEKSLK 182
Query: 183 KGLTESARHFNTIQKYKHIRLQN 205
+G+ ++ +N+ K ++++N
Sbjct: 183 EGVEKAMNIYNS----KQLKIEN 201
>gi|338812330|ref|ZP_08624509.1| peptidyl-tRNA hydrolase [Acetonema longum DSM 6540]
gi|337275680|gb|EGO64138.1| peptidyl-tRNA hydrolase [Acetonema longum DSM 6540]
Length = 200
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y TRHNVGF +D AE +A + G PV+L KPQ
Sbjct: 17 VVVGLGNPGQEYSQTRHNVGFITLDQLAERWQCENWRFKHEALVSEYRGGAEPVILVKPQ 76
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + + +YKL V+V DDM LP G LRLR GG GGH G++S++ +
Sbjct: 77 TYMNLSGVAVASVLNWYKLKPEDVVVVFDDMDLPTGKLRLRLQGGSGGHKGIESLLVHLD 136
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRPP + ++L +F A + ++ ++ V+ ++ +L G T++
Sbjct: 137 KDTFIRMRVGIGRPPAGWETANYVLGRFTAEEKAPMEASITRAVDAVEYILKHGATKAMN 196
Query: 191 HFN 193
FN
Sbjct: 197 EFN 199
>gi|229819487|ref|YP_002881013.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
gi|229565400|gb|ACQ79251.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
Length = 199
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 16/183 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP----- 72
PWL VG+GNPG +Y G RHN G D A G + T +A G +G P
Sbjct: 5 PWLVVGIGNPGPQYAGNRHNAGAMAADVLASRIGSAFTTHKARAAVVDGRLGTLPGGVPG 64
Query: 73 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V++AKP TY+NLSG L+ +Y +P R+LV +D++ LP LRL+ GG GGHNG
Sbjct: 65 PRVIVAKPATYVNLSGGPVAALSTFYDIPAERLLVVYDELDLPAHTLRLKLGGGEGGHNG 124
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
L+S+ GIGRPPG+ DP F+L+ F+A R + L++ + ++ ++
Sbjct: 125 LRSISAALGTRDYVRLRIGIGRPPGRQDPADFVLRDFSAAERVELGVTLEQAADAVEDVV 184
Query: 182 SKG 184
G
Sbjct: 185 VHG 187
>gi|434393133|ref|YP_007128080.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 7428]
gi|428264974|gb|AFZ30920.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 7428]
Length = 212
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 15/197 (7%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGD-A 71
+V P L VGLGNP KY+ TRHN+GF +DA A S + ++ + FG+G +
Sbjct: 8 SVVIPQLIVGLGNPEPKYEQTRHNIGFAAVDALARSWKMPLSENRKFQGEFGEGVSPNRE 67
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KP TYMN SG++ + ++KLP +LV +DDM LP G +RLR +G GGHNG+
Sbjct: 68 KIRLLKPLTYMNNSGQAIRAVVDWFKLPPESILVIYDDMDLPVGKIRLRLSGSAGGHNGM 127
Query: 132 KSVM-----NNFR----GIGRPPGQMDPK----AFLLQKFNAIARERIDTALQEGVEVLK 178
KS + NF GIG+P + + +L +F+ + + L V+ ++
Sbjct: 128 KSAIAHLGTQNFPRLRIGIGKPEQAVSNNGKTISHVLGRFSPTENQVVTKLLPLVVDCVE 187
Query: 179 LLLSKGLTESARHFNTI 195
L L +G+ ++ +NT+
Sbjct: 188 LCLKQGVEKAMNRYNTV 204
>gi|313888220|ref|ZP_07821894.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845910|gb|EFR33297.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 189
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 101/185 (54%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG KY+ TRHNVGF ID A+ I +N + K G+G +G+ V+L KP
Sbjct: 2 YIIAGLGNPGKKYEDTRHNVGFSTIDVLADKLNIKVNKIKFKGLVGEGRIGNEKVILLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN-- 136
T+MN SGES + +YKL ++V DD+ + L+++ NG G HNGLKS++N
Sbjct: 62 HTFMNNSGESIVEILNFYKLKPEDLMVIVDDIDIEFAQLKIKKNGSAGTHNGLKSIVNLT 121
Query: 137 ------NFR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
F+ G+G+ D +F+L F + R+ I A+ + + + G+ +S
Sbjct: 122 GSKDFARFKIGVGKKHPNEDLASFVLSNFPSKDRKHIADAIDACADAVIDAVDSGIDKSM 181
Query: 190 RHFNT 194
+N
Sbjct: 182 NSYNN 186
>gi|413946360|gb|AFW79009.1| hypothetical protein ZEAMMB73_673090 [Zea mays]
Length = 148
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 62/78 (79%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 72
T +PWLFVGLGNPG YKGTRHNVGFEMIDA AE++GIS+++ KA G+G +GD P
Sbjct: 56 TGAQKPWLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKAIVGKGLIGDVP 115
Query: 73 VLLAKPQTYMNLSGESTG 90
V+LAKPQT+MN SG + G
Sbjct: 116 VMLAKPQTFMNASGRTAG 133
>gi|227504124|ref|ZP_03934173.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199281|gb|EEI79329.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 182
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 94/152 (61%), Gaps = 12/152 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVLLA 76
+L VGLGNPG KY GTRHN+GF+++D Q + +VH K+ + +G A ++LA
Sbjct: 4 FLIVGLGNPGPKYAGTRHNIGFDVVDEIV-GQNYTNFSVHKKSNTELAETRLGSAKLVLA 62
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP+++MNLSG L Y+ + +++V HD++ L GV++ R GG GHNGL+S
Sbjct: 63 KPRSFMNLSGGPIKALLQYFSINPAQLIVVHDELELDFGVVKHRFGGGDHGHNGLRSTTK 122
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFN 159
+ GIGRPPG+MDP +F+L+ ++
Sbjct: 123 SLGTKDYQRLSVGIGRPPGRMDPASFVLKPWS 154
>gi|51894373|ref|YP_077064.1| peptidyl-tRNA hydrolase [Symbiobacterium thermophilum IAM 14863]
gi|68052923|sp|Q67JD0.1|PTH_SYMTH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51858062|dbj|BAD42220.1| Stage V sporulation protein C, peptidyl-tRNA hydrolase
[Symbiobacterium thermophilum IAM 14863]
Length = 189
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP--VLLAK 77
L VGLGNPG +Y TRHN G+ ++DAFA G+++ + +G+ G V+L K
Sbjct: 4 LIVGLGNPGPRYAATRHNAGWMLLDAFARKHGVAIEQRGFEGLYGELRWGAEAEKVILLK 63
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P TYMNLSG S A +Y++ +LV DD+ L G LRLR G GGHNG+KSV+
Sbjct: 64 PLTYMNLSGRSVAQAARFYRIAPADILVLFDDLDLEPGRLRLRAKGSAGGHNGVKSVIAE 123
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRP + ++L F + AL VE ++ L++G+ +
Sbjct: 124 LGTAEFPRLRIGIGRPAPGWEVIDWVLAPFGPDDAAAVAAALPRAVEAVECFLTEGILAA 183
Query: 189 ARHFNT 194
+NT
Sbjct: 184 MNRYNT 189
>gi|409392938|ref|ZP_11244452.1| peptidyl-tRNA hydrolase [Gordonia rubripertincta NBRC 101908]
gi|403197238|dbj|GAB87686.1| peptidyl-tRNA hydrolase [Gordonia rubripertincta NBRC 101908]
Length = 189
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
+ VGLGNPG KY+ TRHNVG + D +S G VH K A + +G VL+AK
Sbjct: 4 IVVGLGNPGSKYEKTRHNVGAMVADGLVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVAK 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+ YMN SG GPLA +Y + ++V HD++ + G++RL+ GG GGHNGL+S+
Sbjct: 63 PRVYMNESGRQIGPLAKFYSVAPTDLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSISQV 122
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F + R ++ ++ G + ++LL+S+ L ES
Sbjct: 123 MGTRDYLRVRMGIGRPPGRQDPADFVLKPFPSADRAEVELMIRNGCDAVELLVSQDL-ES 181
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 182 AQ--NTVHAW 189
>gi|452077538|gb|AGF93494.1| aminoacyl-tRNA hydrolase [uncultured organism]
Length = 187
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 9/162 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG+KY TRHNVGF I A +++ I + +A G+G + ++LA+P
Sbjct: 4 YLIVGLGNPGNKYTETRHNVGFRAISALSKAYNIEADWQKYEALLGRGRIAGENIILAQP 63
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SG S L ++ +++ +DD+ LP GV+R++ +G GGHNGLKS++++
Sbjct: 64 LTYMNNSGRSVKKLKDNLRIRTENLIIIYDDLDLPTGVIRIKKDGSSGGHNGLKSIIDSL 123
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GI P + + ++L KF +R+ A+
Sbjct: 124 NTENFPRIKIGIDHPGEKEEVVDYVLGKFGPEEEKRVKEAID 165
>gi|297626905|ref|YP_003688668.1| peptidyl-tRNA hydrolase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922670|emb|CBL57247.1| Peptidyl-tRNA hydrolase (aminoacyl-tRNA hydrolase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 197
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 20/195 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDA--------FAESQGISMNTVHCKATFGQGFVGD 70
WL VGLGNPG +Y TRHN+GF +D F+ S+G+ T + QG G
Sbjct: 4 WLVVGLGNPGPQYANTRHNIGFLTVDELARRAGERFSASRGMHAETASTRIGP-QGIGGP 62
Query: 71 AP--VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
AP ++LAKP+T+MN SG + L+ + + + ++V HD++ L G LR++ GG GH
Sbjct: 63 APEKLVLAKPRTFMNESGRAVRKLSDFLDIEPDHIIVVHDELDLDPGRLRIKLGGGDNGH 122
Query: 129 NGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
NGLKS+ + GIGRP G ++L +F+ RE + + +G E +
Sbjct: 123 NGLKSIRAHLGTGDFYRVRLGIGRPQGHRAGADYVLGRFSKAEREELAIEVDDGAEAVIS 182
Query: 180 LLSKGLTESARHFNT 194
L++ GL + FN
Sbjct: 183 LINAGLGPTQNRFNN 197
>gi|410656906|ref|YP_006909277.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. DCA]
gi|410659944|ref|YP_006912315.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. CF]
gi|409019261|gb|AFV01292.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. DCA]
gi|409022300|gb|AFV04330.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. CF]
Length = 190
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTY 81
+GLGNPG KY T+HN GF ++D A +G+S + + D + KP TY
Sbjct: 5 IGLGNPGVKYSETKHNAGFMLLDRIAAQEGLSFRN-DFRGKVAEMRNKDERIFFLKPITY 63
Query: 82 MNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF--- 138
MNLSG + G L +YYK+ +LV HDDM LP G +RLR G GGHNGLKS++
Sbjct: 64 MNLSGLAVGELISYYKINTQNILVVHDDMDLPLGRIRLRAKGSAGGHNGLKSIIAELGSQ 123
Query: 139 ------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHF 192
G+GRP + D +L F + +D L + L + E+ F
Sbjct: 124 EFWRLKIGVGRPKAEFDVVNHVLSTFAKEEKAVLDGTLDRAQRAVGLWIEGHGDEAMNLF 183
Query: 193 N 193
N
Sbjct: 184 N 184
>gi|315650058|ref|ZP_07903137.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315487687|gb|EFU77991.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 211
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 98/176 (55%), Gaps = 9/176 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ ++
Sbjct: 20 SKMKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAII 79
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
+P TYMN SGES Y+K+ + V+V +DD+ L G LR+R G GGHNG+KS++
Sbjct: 80 LEPLTYMNNSGESVRAFMDYFKIDASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLI 139
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+ G+G P +MD +L FN ++ +D A + +E ++LL++
Sbjct: 140 AHMGTSDFPRIKVGVGEKPTKMDLADHVLGHFNDEDKKLLDEAASDAIEAIRLLVA 195
>gi|84683371|ref|ZP_01011274.1| peptidyl-tRNA hydrolase [Maritimibacter alkaliphilus HTCC2654]
gi|84668114|gb|EAQ14581.1| peptidyl-tRNA hydrolase [Maritimibacter alkaliphilus HTCC2654]
Length = 227
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY G RHN+GF +D E G + + +G +G V+L KP+
Sbjct: 3 LFVGLGNPGSKYAGNRHNIGFMAVDRIREDHGFAPWRSKFQGQVSEGNLGGEKVILLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MNLSG+S G +YKL V VFHD++ LP ++L+ GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVGEAMRFYKLDSTDVTVFHDELDLPPFKVKLKLGGGHAGHNGLRSIHQHIS 122
Query: 140 --------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
GIG P + ++L F + +D L +G+++ A H
Sbjct: 123 PHYGRVRLGIGHPGHKDRVSPYVLSDFAKQEEKWLDDML------------RGISDGAEH 170
Query: 192 FNTIQKYK 199
T K
Sbjct: 171 LVTDDNAK 178
>gi|189095922|pdb|2JRC|A Chain A, Solution Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis H37rv
Length = 204
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPV 73
+A P L VGLGNPG Y TRHN+GF + D A G A G +
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSL 60
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+S
Sbjct: 61 VLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRS 120
Query: 134 VM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
V+ +F+ GIGRPPG+ DP AF+L+ F R + T ++ + +LL+ +G
Sbjct: 121 VVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQG 180
Query: 185 L 185
+
Sbjct: 181 M 181
>gi|415705386|ref|ZP_11460657.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 75712]
gi|388052108|gb|EIK75132.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 75712]
Length = 199
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 23/195 (11%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVL 74
WL VGLGNPG KY+GTRHN+GF + D +E IS + + G+G + A
Sbjct: 6 WLIVGLGNPGSKYEGTRHNMGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKFF 65
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAKP T+MN SG + +++YY++ + +++ HDDM L G ++++ G GGHNG++S+
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIETDHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRSI 125
Query: 135 MNNFRGIGRPP----------GQMDPKA------FLLQKFNAIARERIDTALQEGVEVLK 178
R +G P Q +A ++L F + + L +G + ++
Sbjct: 126 D---RSLGTPQYARVRMGVGHAQRGARAHDNTVNWVLGGFAGAQKSELPNFLADGADAVE 182
Query: 179 LLLSKGLTESARHFN 193
++ +GL+ + HFN
Sbjct: 183 SVIFRGLSATQEHFN 197
>gi|336120127|ref|YP_004574905.1| peptidyl-tRNA hydrolase [Microlunatus phosphovorus NM-1]
gi|334687917|dbj|BAK37502.1| peptidyl-tRNA hydrolase [Microlunatus phosphovorus NM-1]
Length = 209
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 15/191 (7%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----DAP 72
WL VGLGNPG Y+G RHNVG+ + +A A G + +A +G +G
Sbjct: 19 WLVVGLGNPGPAYRGHRHNVGYLVAEALAARIGARFSAPRGMRAEVAEGRLGPLGPDSVK 78
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
+ + K ++YMN +G + +++ +P + ++ HD++ + G +R++ GG GHNGLK
Sbjct: 79 LAIMKSRSYMNETGGPVSKVQSWFGVPTSHLIAIHDELDIDPGKIRVKFGGGDNGHNGLK 138
Query: 133 SVMNN------FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
S+ + FR G+GRPPG+ DP FLL F A R + ++ + ++ L++
Sbjct: 139 SIRRSLGTGDYFRVRVGVGRPPGRQDPADFLLSNFTAAERADLGVEVERAADAVESLMTL 198
Query: 184 GLTESARHFNT 194
GL + FN+
Sbjct: 199 GLERTQSAFNS 209
>gi|210634808|ref|ZP_03298314.1| hypothetical protein COLSTE_02241 [Collinsella stercoris DSM 13279]
gi|210158612|gb|EEA89583.1| aminoacyl-tRNA hydrolase [Collinsella stercoris DSM 13279]
Length = 209
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 14 AVARPW---LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD 70
A A+P + GLGNPGD+Y TRHN GF+ +D A G+S A V D
Sbjct: 2 ATAQPLPIRMVAGLGNPGDEYADTRHNAGFKAVDVLASQAGVSYWKNQAGAEVALINVND 61
Query: 71 AP-------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 123
V+L KPQ+YMN SG L A YK+ +LV HD++ +P G +R++ G
Sbjct: 62 PEAEGGKREVVLVKPQSYMNTSGGPISKLCAQYKVKPEELLVIHDELDIPAGDVRVKVGG 121
Query: 124 GHGGHNGLKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 174
GH GHNGL+S+++ GIG PPG+M F+L++ + E +
Sbjct: 122 GHAGHNGLRSIIDKLGSRDFSRIRAGIGDPPGRMPVADFVLKQLRSREAEDFAVMTSQAA 181
Query: 175 EVLKLLLSKGLTESARHFN 193
E L +++G+ + H N
Sbjct: 182 EAAALAITRGVVFARDHVN 200
>gi|386867185|ref|YP_006280179.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|385701268|gb|AFI63216.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
Length = 199
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVL 74
WL VGLGNPG KY+ TRHN+GF ++ A+ I A G+G + A V
Sbjct: 6 WLIVGLGNPGVKYRNTRHNMGFMTVNELAKRWSIHFANHKGLADLGKGTMSLNGQTAKVF 65
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KP TYMN SG++ + YY + L+ ++V HDDM L G ++L+ G GGHNG+KS+
Sbjct: 66 LCKPLTYMNDSGQAVQSIREYYHINLDHIVVIHDDMDLEFGRIKLKSGGSAGGHNGIKSI 125
Query: 135 MNNFR---------GIGRPPGQMDPKA----FLLQKFNAIARERIDTALQEGVEVLKLLL 181
G+G D ++L +FNA R+++ L +G + + ++
Sbjct: 126 DRCLHSPDYARVRMGVGHASRSGDAHDNTINWVLGEFNAAQRKQLPEFLADGADAAETIV 185
Query: 182 SKGLTESARHFNT 194
+GLT++ FN
Sbjct: 186 FEGLTKAQDKFNA 198
>gi|85859732|ref|YP_461934.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
gi|119391023|sp|Q2LUK5.1|PTH_SYNAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85722823|gb|ABC77766.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
Length = 196
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 17/187 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN GF ++D AE Q I M+ A +G+G + VLLAKPQ
Sbjct: 3 LIVGLGNPGARYRFTRHNFGFFVLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S LA ++K+ + VLV HDD+ LP GV+RL+ GG GGH GL S+ ++
Sbjct: 63 TFMNLSGKSVRKLADFFKIVVEDVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICDSLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNA----IARERIDTALQEGVEVLKLLLSKGLT 186
GIG+P + + ++L+ F I I TA +EV +S G+
Sbjct: 123 GPEFQRVRLGIGKPAQRSAVERYVLEPFTESELRILPRIIVTARSAILEV----ISSGIK 178
Query: 187 ESARHFN 193
+ +N
Sbjct: 179 TAMNSYN 185
>gi|222054665|ref|YP_002537027.1| peptidyl-tRNA hydrolase [Geobacter daltonii FRC-32]
gi|254783870|sp|B9M5U5.1|PTH_GEOSF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221563954|gb|ACM19926.1| Aminoacyl-tRNA hydrolase [Geobacter daltonii FRC-32]
Length = 191
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ TRHN GF ++D + GI+++ G+G ++L KPQ
Sbjct: 5 IIVGLGNPGPKYQWTRHNAGFMVLDRLSHLAGIAISKKTFSGVCGEGNWQGERLILLKPQ 64
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S ++KLP+ ++V HDD+ +P G ++L+ GGH GHNGL+S+
Sbjct: 65 TFMNLSGRSAAEAIRFHKLPIEDLIVIHDDLDIPFGRVKLKQGGGHAGHNGLRSLAQELG 124
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIGRP D ++L F+ + L V+++++L +GL ++
Sbjct: 125 SGDFVRVRVGIGRPV-HGDVVNYVLNNFSPEEMASLPRLLDGVVDLVEMLAREGLPKTMS 183
Query: 191 HFNT 194
+N
Sbjct: 184 LYNN 187
>gi|433630118|ref|YP_007263746.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070010]
gi|433634075|ref|YP_007267702.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070017]
gi|433641145|ref|YP_007286904.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070008]
gi|432157693|emb|CCK54971.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070008]
gi|432161711|emb|CCK59056.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070010]
gi|432165668|emb|CCK63146.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070017]
Length = 191
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPV 73
+A P L VGLGNPG Y TRHN+GF + D A G A G +
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHNLGFMVADLLAARLGAKFKAHKRSGAEVATGRSAGRSL 60
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+S
Sbjct: 61 VLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRS 120
Query: 134 VM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
V+ +F+ GIGRPPG+ DP AF+L+ F R + T ++ + +LL+ +G
Sbjct: 121 VVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQG 180
Query: 185 L 185
+
Sbjct: 181 M 181
>gi|223936332|ref|ZP_03628244.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
gi|223894850|gb|EEF61299.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
Length = 197
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIS-MNTVHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG KY TRHNVGF +++ AE S + A + +LL KP
Sbjct: 6 LIVGLGNPGSKYALTRHNVGFRLVECLAERWKASWVAEKKFDAMLARTERNGERILLCKP 65
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QT+MN SGE+ G +A++Y+LPL +++V DD LP G +R+R NG GGH+GL+S+ +
Sbjct: 66 QTFMNASGETVGAMASFYRLPLPQLVVAVDDADLPFGQIRMRANGSSGGHHGLESIEKHL 125
Query: 139 ---------RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGR + + ++L F+ + +D L + ++ L G+ ++
Sbjct: 126 GTREFARLRLGIGRAADDRREITDYVLAPFSGAEAKTVDKVLNTASDQIECWLDGGIQKA 185
Query: 189 ARHFN 193
FN
Sbjct: 186 MSQFN 190
>gi|417962920|ref|ZP_12605020.1| Peptidyl-tRNA hydrolase, partial [Candidatus Arthromitus sp. SFB-3]
gi|380335200|gb|EIA25451.1| Peptidyl-tRNA hydrolase, partial [Candidatus Arthromitus sp. SFB-3]
Length = 167
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGN G +Y TRHNVGF M+D E IS++ + + +G G + ++ KP
Sbjct: 2 FLIVGLGNIGSRYNNTRHNVGFIMLDRICEDLNISLDNENDTSYYGTGIISGKNIMCMKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
+T+MNLSG + + Y+K+ ++ +LV +DD+ L +R++ G HGGHNG+K ++N
Sbjct: 62 KTFMNLSGSAVLEIINYFKISIDDLLVIYDDIYLDVSKIRIKQRGSHGGHNGIKDIINKI 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQE 172
GIG +D ++L KF +D+ ++
Sbjct: 122 NTDKFKRIKIGIGENK-NIDLSNYVLSKFTYDEMRMLDSKYED 163
>gi|397736067|ref|ZP_10502751.1| peptidyl-tRNA hydrolase [Rhodococcus sp. JVH1]
gi|396927910|gb|EJI95135.1| peptidyl-tRNA hydrolase [Rhodococcus sp. JVH1]
Length = 190
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 108/177 (61%), Gaps = 12/177 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG +Y+ TRHNVGF + + G +VH K A QG + P +LAK
Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKF-SVHKKSGAEIVQGRLEGRPTILAK 65
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV--- 134
P+++MNLSG + LA ++ + ++V HD++ L G +RL+ GG GGHNGL+S+
Sbjct: 66 PRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISSA 125
Query: 135 ------MNNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+MDP +++L+ F+++ R+ +D +E + ++L+L GL
Sbjct: 126 LGTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRVGL 182
>gi|347534134|ref|YP_004840804.1| peptidyl-tRNA hydrolase [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504190|gb|AEN98872.1| Peptidyl-tRNA hydrolase [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 185
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 75/116 (64%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G++Y GTRHN GF ++ FA I +N A FG G V V++ +P
Sbjct: 3 MIVGLGNIGNEYAGTRHNTGFMAVEKFAAEHDIEINKQKMDAMFGTGMVDGEKVMVVEPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
TYMN SG + PL +YKL L+ V++ +DDM L G +RLR++G GGHNG+KS++
Sbjct: 63 TYMNESGRAVHPLMQFYKLDLDDVVIVYDDMDLHVGRIRLRNHGSAGGHNGIKSLI 118
>gi|299820652|ref|ZP_07052541.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
gi|299817673|gb|EFI84908.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
Length = 184
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ TRHNVGF ++D + + V G +G VLL KP
Sbjct: 3 MIVGLGNPGMKYERTRHNVGFMVVDELSYRYQLPWKKVKQNGMVATGMIGSEKVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG GPL YY + + ++V +DD+ LP G +RLR G GGHNG+KS++ + +
Sbjct: 63 TFMNESGLCVGPLMDYYDIAVEDLIVIYDDLDLPVGKIRLRTKGSAGGHNGMKSIIQHLK 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+ RP + +L +F+ + I A+Q + ++ E
Sbjct: 123 TQEFNRIRVGVDRPRNG-EVIHHVLGEFSKAEQPTIIEAIQTSADAVEAFAEHSFVEVMN 181
Query: 191 HFN 193
FN
Sbjct: 182 KFN 184
>gi|385652381|ref|ZP_10046934.1| peptidyl-tRNA hydrolase [Leucobacter chromiiresistens JG 31]
Length = 208
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 101/186 (54%), Gaps = 11/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVLLA 76
WL VGLGNPG KY+ TRHNVG +D A G ++ A +G V G ++LA
Sbjct: 18 WLVVGLGNPGAKYEATRHNVGQMALDVLASRIGGRFSSHRTGARVAEGRVRPGGPKLVLA 77
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
K +MN SG T LA Y+ +P RV+V HDD+ LP ++L+ GGHGGHNGL+ +
Sbjct: 78 KSNGFMNTSGGPTSALAKYFAIPAERVIVLHDDLDLPFDTVKLKQGGGHGGHNGLRDIAK 137
Query: 137 NFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
GIGRPPGQ DP F+L+ F R + L++ + + L+ GL
Sbjct: 138 ALDTPAFLRIRIGIGRPPGQQDPADFVLKPFATGERSTLPVLLEDAADAAESLVDDGLLA 197
Query: 188 SARHFN 193
+ + F+
Sbjct: 198 AQQRFH 203
>gi|15608154|ref|NP_215530.1| Probable peptidyl-tRNA hydrolase Pth [Mycobacterium tuberculosis
H37Rv]
gi|15840442|ref|NP_335479.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31792205|ref|NP_854698.1| peptidyl-tRNA hydrolase [Mycobacterium bovis AF2122/97]
gi|121636943|ref|YP_977166.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660796|ref|YP_001282319.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148822223|ref|YP_001286977.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis F11]
gi|167968127|ref|ZP_02550404.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|224989415|ref|YP_002644102.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253799956|ref|YP_003032957.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 1435]
gi|254231308|ref|ZP_04924635.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|254363930|ref|ZP_04979976.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|254549999|ref|ZP_05140446.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442435|ref|ZP_06432179.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289446595|ref|ZP_06436339.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289568992|ref|ZP_06449219.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289573654|ref|ZP_06453881.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289744750|ref|ZP_06504128.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289749544|ref|ZP_06508922.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289753075|ref|ZP_06512453.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289757096|ref|ZP_06516474.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|289761150|ref|ZP_06520528.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|294995203|ref|ZP_06800894.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 210]
gi|297633540|ref|ZP_06951320.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 4207]
gi|297730525|ref|ZP_06959643.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN R506]
gi|298524510|ref|ZP_07011919.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|306775149|ref|ZP_07413486.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|306781936|ref|ZP_07420273.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|306783709|ref|ZP_07422031.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|306788064|ref|ZP_07426386.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|306792397|ref|ZP_07430699.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|306796800|ref|ZP_07435102.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|306802686|ref|ZP_07439354.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|306806865|ref|ZP_07443533.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|306967066|ref|ZP_07479727.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|306971256|ref|ZP_07483917.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|307083545|ref|ZP_07492658.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|313657854|ref|ZP_07814734.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN V2475]
gi|339631075|ref|YP_004722717.1| peptidyl-tRNA hydrolase [Mycobacterium africanum GM041182]
gi|340626025|ref|YP_004744477.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium canettii CIPT
140010059]
gi|375297194|ref|YP_005101461.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
gi|378770777|ref|YP_005170510.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Mexico]
gi|383306895|ref|YP_005359706.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB327]
gi|385990463|ref|YP_005908761.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5180]
gi|385994062|ref|YP_005912360.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5079]
gi|385997794|ref|YP_005916092.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CTRI-2]
gi|392385721|ref|YP_005307350.1| pth [Mycobacterium tuberculosis UT205]
gi|392433397|ref|YP_006474441.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|397672840|ref|YP_006514375.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|422811973|ref|ZP_16860367.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|424805483|ref|ZP_18230914.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|424946763|ref|ZP_18362459.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis NCGM2209]
gi|433626110|ref|YP_007259739.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140060008]
gi|449063061|ref|YP_007430144.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Korea 1168P]
gi|54038905|sp|P65866.1|PTH_MYCBO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041591|sp|P65865.1|PTH_MYCTU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229421|sp|A1KHF2.1|PTH_MYCBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229425|sp|A5U157.1|PTH_MYCTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783880|sp|C1AM05.1|PTH_MYCBT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157836744|pdb|2Z2I|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836745|pdb|2Z2J|A Chain A, Crystal Structure Of Peptidyl-trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836746|pdb|2Z2J|B Chain B, Crystal Structure Of Peptidyl-trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836747|pdb|2Z2K|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|375332471|pdb|3TCK|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 4
gi|375332472|pdb|3TCN|A Chain A, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 2 Grown In Presence Of
Pentaglycine
gi|375332473|pdb|3TCN|B Chain B, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 2 Grown In Presence Of
Pentaglycine
gi|375332474|pdb|3TD2|A Chain A, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 5
gi|375332475|pdb|3TD6|A Chain A, Peptidyl-Trna Hydrolase From Mycobacterium Tuberculosis
From Trigonal Partially Dehydrated Crystal
gi|13880613|gb|AAK45293.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31617793|emb|CAD93902.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium bovis
AF2122/97]
gi|121492590|emb|CAL71058.1| Probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600367|gb|EAY59377.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|134149444|gb|EBA41489.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|148504948|gb|ABQ72757.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148720750|gb|ABR05375.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis F11]
gi|224772528|dbj|BAH25334.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253321459|gb|ACT26062.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 1435]
gi|289415354|gb|EFD12594.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289419553|gb|EFD16754.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289538085|gb|EFD42663.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289542746|gb|EFD46394.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289685278|gb|EFD52766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289690131|gb|EFD57560.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289693662|gb|EFD61091.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289708656|gb|EFD72672.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|289712660|gb|EFD76672.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|298494304|gb|EFI29598.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|308216299|gb|EFO75698.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|308325327|gb|EFP14178.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|308331492|gb|EFP20343.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|308335298|gb|EFP24149.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|308339106|gb|EFP27957.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|308342778|gb|EFP31629.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|308346687|gb|EFP35538.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|308350602|gb|EFP39453.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|308355235|gb|EFP44086.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|308359190|gb|EFP48041.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|308366756|gb|EFP55607.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|323720514|gb|EGB29596.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|326904759|gb|EGE51692.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|328459699|gb|AEB05122.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
gi|339294016|gb|AEJ46127.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5079]
gi|339297656|gb|AEJ49766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5180]
gi|339330431|emb|CCC26096.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium africanum
GM041182]
gi|340004215|emb|CCC43355.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium canettii CIPT
140010059]
gi|341600959|emb|CCC63630.1| probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344218840|gb|AEM99470.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CTRI-2]
gi|356593098|gb|AET18327.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Mexico]
gi|358231278|dbj|GAA44770.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis NCGM2209]
gi|378544272|emb|CCE36545.1| pth [Mycobacterium tuberculosis UT205]
gi|380720848|gb|AFE15957.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB327]
gi|392054806|gb|AFM50364.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|395137745|gb|AFN48904.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|432153716|emb|CCK50939.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140060008]
gi|440580484|emb|CCG10887.1| putative PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium tuberculosis
7199-99]
gi|444894509|emb|CCP43764.1| Probable peptidyl-tRNA hydrolase Pth [Mycobacterium tuberculosis
H37Rv]
gi|449031569|gb|AGE66996.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 191
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPV 73
+A P L VGLGNPG Y TRHN+GF + D A G A G +
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSL 60
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+S
Sbjct: 61 VLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRS 120
Query: 134 VM-----NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
V+ +F+ GIGRPPG+ DP AF+L+ F R + T ++ + +LL+ +G
Sbjct: 121 VVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQG 180
Query: 185 L 185
+
Sbjct: 181 M 181
>gi|336453351|ref|YP_004607817.1| peptidyl-tRNA hydrolase [Helicobacter bizzozeronii CIII-1]
gi|335333378|emb|CCB80105.1| peptidyl-tRNA hydrolase [Helicobacter bizzozeronii CIII-1]
Length = 186
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 94/173 (54%), Gaps = 12/173 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNP Y TRHNVGF+++D+ A+S GIS T K VG LL KP
Sbjct: 2 LIVGLGNPTPAYAHTRHNVGFDILDSLAQSLGISF-THASKYQADYAKVGTQGYLL-KPM 59
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG++ Y+ + VL+ HDD+ LP G +R + GGHGGHNGLKS+ ++
Sbjct: 60 TYMNLSGQALAAFLRYHDI--QSVLIVHDDLDLPLGAVRFKSKGGHGGHNGLKSIEQHYP 117
Query: 140 --------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
GIGR + D A++LQ+F+ + + L+ L +G
Sbjct: 118 HPVYKMKIGIGRSVFKHDTIAYVLQRFSPEQESLKEQIFTHARQALEFYLQQG 170
>gi|295397824|ref|ZP_06807888.1| aminoacyl-tRNA hydrolase [Aerococcus viridans ATCC 11563]
gi|294973921|gb|EFG49684.1| aminoacyl-tRNA hydrolase [Aerococcus viridans ATCC 11563]
Length = 221
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY+GTRHN+GF ++D +A + N K + + FV V+ KP
Sbjct: 37 LIVGLGNPGKKYEGTRHNIGFIVLDEWAHQHHETFNKTGFKGEYFETFVNGEKVIFLKPT 96
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SGE+ G +A YY +P+ +LV +DD+ + G +RLR G GGHNG+KS++ +
Sbjct: 97 TFMNNSGEAVGAVANYYSIPVEDILVVYDDLDMDPGRIRLRQKGSAGGHNGVKSLIAHLG 156
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIG P +L +F + A + VE + L+ E+
Sbjct: 157 TDKIRRIKLGIGHPGKDGTVVNHVLSRFPKEDHTPMLAATRAAVEAIDYWLAGHSFEETM 216
Query: 190 RHFN 193
++N
Sbjct: 217 TNYN 220
>gi|257899965|ref|ZP_05679618.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com15]
gi|430842701|ref|ZP_19460613.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1007]
gi|431084335|ref|ZP_19496005.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1604]
gi|431115419|ref|ZP_19497836.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1613]
gi|431600921|ref|ZP_19522406.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1861]
gi|431739280|ref|ZP_19528217.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1972]
gi|431742256|ref|ZP_19531151.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2039]
gi|257837877|gb|EEV62951.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com15]
gi|430492925|gb|ELA69266.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1007]
gi|430564879|gb|ELB04056.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1604]
gi|430568578|gb|ELB07618.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1613]
gi|430590078|gb|ELB28163.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1861]
gi|430596110|gb|ELB33961.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1972]
gi|430600412|gb|ELB38061.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2039]
Length = 186
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF ++D A + +A + F +LL KPQ
Sbjct: 3 MIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQATFKKNPFEAEVAEFFHNGEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLN 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G+ +L F+ + I+ ++ + V+ ++ L+ ++
Sbjct: 123 TNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFVDAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NQFN 186
>gi|354807942|ref|ZP_09041391.1| peptidyl-tRNA hydrolase [Lactobacillus curvatus CRL 705]
gi|354513563|gb|EHE85561.1| peptidyl-tRNA hydrolase [Lactobacillus curvatus CRL 705]
Length = 185
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY T+HN+GF +ID E +++N +A +G + L KP
Sbjct: 3 MIVGLGNPGSKYAKTKHNIGFMVIDQLCERFNVTLNKHDFEAEYGSFKYEGETIFLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG S GPL YY++ L+ ++V DDM L G LRLR G GGHNG+KS++
Sbjct: 63 TFMNDSGRSVGPLMKYYQVNLDELVVIQDDMDLTLGKLRLRQKGSAGGHNGIKSIIASVQ 122
Query: 136 -NNFRGIG---RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
+ F+ + + P + ++L F+ + I+ AL + E L+
Sbjct: 123 SSEFKRVKVGIQHPQKSTVVNWVLTPFDKDSAPIINQALDQACEALE 169
>gi|113476455|ref|YP_722516.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
gi|119391035|sp|Q110N1.1|PTH_TRIEI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110167503|gb|ABG52043.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
Length = 219
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 17/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP-VLL 75
P L VGLGNP KY TRHN+GF ID A +S++ K FG+G A + L
Sbjct: 13 PKLIVGLGNPEPKYDQTRHNIGFTGIDTIANIWQVSLSENRKFKGEFGEGRRPKAEKIYL 72
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SGE+ + +YKLP + VL+ +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 73 LKPLTYMNRSGEAISAVVNWYKLPPSCVLIIYDDMDLPMGRLRLRLSGSAGGHNGMKSAI 132
Query: 136 NNF---------RGIGRPP------GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 180
+ GIG+P G+ + +L KF+ + + L+ V+ ++L
Sbjct: 133 AHLGTQEFPRLRIGIGKPKNITAERGEAKTISHVLGKFSPKENKLMTQVLELVVDAVELS 192
Query: 181 LSKGLTESARHFN 193
L +G+ ++ +N
Sbjct: 193 LKQGIEKAMSLYN 205
>gi|289551699|ref|YP_003472603.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315660331|ref|ZP_07913184.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|385785246|ref|YP_005761419.1| putative peptidyl-tRNA hydrolase [Staphylococcus lugdunensis
N920143]
gi|418416035|ref|ZP_12989237.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635169|ref|ZP_13197553.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis VCU139]
gi|289181230|gb|ADC88475.1| Peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315494620|gb|EFU82962.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|339895502|emb|CCB54831.1| putative peptidyl-tRNA hydrolase [Staphylococcus lugdunensis
N920143]
gi|374842118|gb|EHS05565.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis VCU139]
gi|410872945|gb|EKS20882.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 190
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 97/171 (56%), Gaps = 9/171 (5%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE++D + +++ K + +G+ V+ +P T
Sbjct: 4 IVGLGNIGKRFEHTRHNIGFEVVDYLLDKYNFNLDKQKFKGAYTIERIGNDKVMFIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN--- 137
MNLSG++ GPL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 64 MMNLSGQAVGPLMDYYNVAIDELIVLYDDLDLNQGQVRLRQKGSAGGHNGMKSIIQHLGT 123
Query: 138 --FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
F+ G+GRP M ++LQKF+ +D ++ + ++ +
Sbjct: 124 EQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMMTMDHVVEHAAQAVEAFID 174
>gi|212703169|ref|ZP_03311297.1| hypothetical protein DESPIG_01210 [Desulfovibrio piger ATCC 29098]
gi|212673435|gb|EEB33918.1| aminoacyl-tRNA hydrolase [Desulfovibrio piger ATCC 29098]
Length = 197
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 23/191 (12%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAF----------AESQ-GISMNTVHCKATFGQGFV 68
+ VGLGNPG++Y GTRHN GF +++ +SQ G + + +G G
Sbjct: 6 VVVGLGNPGNQYAGTRHNCGFAFVESLLDHARREGGQVQSQNGGKFSCELWRLRYG-GLP 64
Query: 69 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 128
GD L A PQT+MNLSG+ PL A++K+ ++++V HD++ +P G LR + GG+ GH
Sbjct: 65 GD--WLAAMPQTFMNLSGQCVQPLLAWHKIRPDQLVVVHDELDIPAGELRFKKGGGNAGH 122
Query: 129 NGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 179
NGLKS+ GIGRPP + D ++L + + ++I TA + +EVL++
Sbjct: 123 NGLKSITQMLATPDFYRLRIGIGRPPQKGDVINWVLGRPCSEDADKIRTATDKALEVLEI 182
Query: 180 LLSKGLTESAR 190
KGL + R
Sbjct: 183 FAKKGLEAAVR 193
>gi|407786490|ref|ZP_11133635.1| peptidyl-tRNA hydrolase [Celeribacter baekdonensis B30]
gi|407201211|gb|EKE71212.1| peptidyl-tRNA hydrolase [Celeribacter baekdonensis B30]
Length = 228
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 90/160 (56%), Gaps = 8/160 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY G RHN+GF ++D E G + + +G +G V+L KP+
Sbjct: 3 LFVGLGNPGTKYAGNRHNIGFMVVDRVQEDHGFAPWRSKFQGQVSEGKLGSEKVILIKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S G +YKL V+VFHD++ L G +R++ GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVVVFHDELDLAPGKVRVKTGGGHAGHNGLRSIHQHIG 122
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GIG P + ++L F ++ +D ++
Sbjct: 123 ADYDRVRLGIGHPGHKDRVAPYVLSDFAKADQDWLDDVIR 162
>gi|166363429|ref|YP_001655702.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
gi|166085802|dbj|BAG00510.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
Length = 208
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 104/190 (54%), Gaps = 18/190 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP--- 72
P L +GLGNP KY TRHN+GFE +D+ A G+S F QGF+ GD+P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLPG 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG+
Sbjct: 68 KIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGI 127
Query: 132 KSVM-----NNFRGIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS++ NF + G+ KA + L +F E I L + ++L L +
Sbjct: 128 KSMIAHVGTENFARLRIGIGKSTEKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQ 187
Query: 184 GLTESARHFN 193
GL ++ +N
Sbjct: 188 GLQKAMSLYN 197
>gi|217967892|ref|YP_002353398.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
gi|217336991|gb|ACK42784.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
Length = 193
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 21/187 (11%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMID------AFAESQGISMNTVHCKATFGQGFVGDAPVLL 75
+GLGNPG +Y TRHNVGF ++D F Q + N + TFG+ + + V L
Sbjct: 7 IGLGNPGYEYANTRHNVGFMVVDYLQNFYKFPSYQKTNFNLL----TFGK--ISNTKVYL 60
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KPQTYMNLSG + +LV HDD+ LP G +R++ NG GGHNG+KS++
Sbjct: 61 VKPQTYMNLSGIGVKEFIEKFAFAPEELLVIHDDLDLPIGTIRIKFNGKDGGHNGIKSII 120
Query: 136 ------NNFR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
N +R GIG+P + ++L KFN + I+ LQ ++++ ++ +G
Sbjct: 121 KEINTSNFYRLRIGIGKPQDKNQIVEYVLGKFNEDELKTIEKILQSSHQIIETIIKEGWD 180
Query: 187 ESARHFN 193
++ +N
Sbjct: 181 KAQNLYN 187
>gi|441514194|ref|ZP_20996015.1| peptidyl-tRNA hydrolase [Gordonia amicalis NBRC 100051]
gi|441450959|dbj|GAC53976.1| peptidyl-tRNA hydrolase [Gordonia amicalis NBRC 100051]
Length = 189
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG KY+ TRHNVG + DA +S G VH K A + +G VL+AK
Sbjct: 4 LIVGLGNPGSKYEKTRHNVGAMVADALVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVAK 62
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
+ YMN SG GPLA +Y + ++V HD++ + G +RL+ GG GGHNGL+S+
Sbjct: 63 SRVYMNESGRQIGPLAKFYSVTPADLIVVHDELDIDFGAVRLKRGGGEGGHNGLRSISQV 122
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F + R ++ ++ G + ++LL+S+ L ES
Sbjct: 123 MGTRDYLRVRMGIGRPPGRQDPADFVLKPFPSADRAEVELMIRNGCDAVELLVSQDL-ES 181
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 182 AQ--NTVHAW 189
>gi|428300098|ref|YP_007138404.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 6303]
gi|428236642|gb|AFZ02432.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 6303]
Length = 209
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 102/192 (53%), Gaps = 15/192 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVL-L 75
P L VGLGNP KY TRHN+GF IDA + I ++ + +G+G L L
Sbjct: 12 PQLIVGLGNPEPKYDQTRHNIGFAAIDALSRGWKIPLSENRKFQGDYGEGIAPSGGKLRL 71
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KP TYMN SG+S + ++YKL VLV +DDM LP G RLR +G GGHNG+KS +
Sbjct: 72 LKPMTYMNRSGQSMQAVTSWYKLAPESVLVIYDDMDLPIGKTRLRLSGSAGGHNGMKSAI 131
Query: 136 NNF---------RGIGRPPG----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+ GIG+P D + +L KFNA + ++ L +E ++L +
Sbjct: 132 AHLGNDQFPRLRIGIGKPKNVSAEDKDTVSHVLGKFNAAETQLMEQVLTFVIECVELSIQ 191
Query: 183 KGLTESARHFNT 194
+G+ ++ N+
Sbjct: 192 QGVEKAMNRCNS 203
>gi|374290018|ref|YP_005037103.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
gi|301168559|emb|CBW28149.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
Length = 190
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 11/183 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+ +E D + +Q + + + K + V+ KPQ
Sbjct: 5 LIVGLGNPGAEYRNTRHNIAWETFDNLSFAQNLRWQSKY-KGEMATTEIEGEKVIFLKPQ 63
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSGES PLA ++K+P+ +LV HD++ L G + + GG GHNGLKS+
Sbjct: 64 TFMNLSGESVAPLANFFKIPVEDILVVHDELDLNFGTIAYKDGGGLAGHNGLKSIAQCLG 123
Query: 136 -NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
NF+ GIGRP ++L ++ E +++ L+ + ++ + KG +AR
Sbjct: 124 KQNFKRLRVGIGRPV-HGSVSNWVLSGYHGEDAEFLESYLKGAAKAVEAYIEKGFQSAAR 182
Query: 191 HFN 193
++
Sbjct: 183 TYS 185
>gi|293571070|ref|ZP_06682111.1| peptidyl-tRNA hydrolase [Enterococcus faecium E980]
gi|291608853|gb|EFF38134.1| peptidyl-tRNA hydrolase [Enterococcus faecium E980]
Length = 197
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF ++D A + +A + F +LL KPQ
Sbjct: 14 MIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQATFKKNPFEAEVAEFFHNGEKILLVKPQ 73
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 74 TFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLN 133
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G+ +L F+ + I+ ++ + V+ ++ L+ ++
Sbjct: 134 TNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFVDAM 193
Query: 190 RHFN 193
FN
Sbjct: 194 NQFN 197
>gi|227548220|ref|ZP_03978269.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079694|gb|EEI17657.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
Length = 200
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 18/197 (9%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC-K 60
L R + G A WL VGLGNPG++Y TRHNVG+ +D G+++ H K
Sbjct: 4 LFRRLIGTGNRGNDAAQWLVVGLGNPGEEYAKTRHNVGWMALDRLLSHGGVTLRQDHAVK 63
Query: 61 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
A V D + A+P TYMN SG + GPLAA +P RV+V HD++ LP G +RLR
Sbjct: 64 ALVA---VKDG-IAYARPLTYMNESGAAVGPLAARLNVPAERVIVLHDELDLPPGRVRLR 119
Query: 121 HNGGHGGHNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
G GHNGLKS+ + GIGRPPG ++L + A Q
Sbjct: 120 RGGSENGHNGLKSLSEHLGTRDYVRVRIGIGRPPGGTAVPDWVLSAVTGDVSAETEKAAQ 179
Query: 172 EGVEVLKLLLSKGLTES 188
+L++ GL +
Sbjct: 180 AA----RLVIVDGLERA 192
>gi|284033575|ref|YP_003383506.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
gi|283812868|gb|ADB34707.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
Length = 191
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAK 77
WL VGLGNPG Y TRHNVG + D A G +A + +G A +LAK
Sbjct: 6 WLVVGLGNPGPTYAKTRHNVGQSVADELAGRVGGGWKQHKQARAEVIETRIGGARTVLAK 65
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P++YMN SG L ++K+ +++ HD++ L LR++ GG GHNGL+S+ +
Sbjct: 66 PRSYMNESGGPVAGLLRFFKVEPAQLIAVHDELDLDFATLRVKFGGGDNGHNGLRSIRKS 125
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
G+GRPPG+ +P F+L +F+A R+ + AL + ++ L++ GL +
Sbjct: 126 VGTGDYHRVRFGVGRPPGRQNPADFVLNEFSAAERKDLPFALDRTADAVESLIADGLEVT 185
Query: 189 ARHFNT 194
+N+
Sbjct: 186 QGKYNS 191
>gi|344345141|ref|ZP_08775997.1| Peptidyl-tRNA hydrolase [Marichromatium purpuratum 984]
gi|343803232|gb|EGV21142.1| Peptidyl-tRNA hydrolase [Marichromatium purpuratum 984]
Length = 194
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG +Y+ TRHNVGF +D+ A S G+ + +G + L KP
Sbjct: 8 LIVGLGNPGAQYEATRHNVGFWFVDSLARSAGVDFRPESRFHGELCRCVIGGRDLRLLKP 67
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SG S +A Y+ +PL +L+ HD++ LP G +RL+ GGH GHNGL+ ++
Sbjct: 68 STYMNHSGRSVAAVARYFDIPLESILIAHDELDLPVGAVRLKQGGGHAGHNGLRDSISAL 127
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
GI P + ++L + + R+ ID AL E VL LL
Sbjct: 128 GGRDFWRLRIGIDHPGDRSLVTGYVLGRPSGSDRQAIDDALFETERVLDDLL 179
>gi|346311930|ref|ZP_08853928.1| peptidyl-tRNA hydrolase [Collinsella tanakaei YIT 12063]
gi|345899667|gb|EGX69506.1| peptidyl-tRNA hydrolase [Collinsella tanakaei YIT 12063]
Length = 209
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIS---------MNTVHCKATFGQGFVGD 70
+ GLGNPG++YK TRHN GF+ ID A G++ + T+ +G G
Sbjct: 11 MVAGLGNPGEEYKDTRHNAGFKAIDELARQAGVTYWKNQLGAEVATIQVHDPEAEG--GR 68
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
VLL KPQ++MN SG L A K+ + +LV HD++ +P G +R++ GGH GHNG
Sbjct: 69 REVLLVKPQSFMNTSGGPISKLCAQNKITVEELLVIHDELDIPEGDVRVKVGGGHAGHNG 128
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
L+S+++ GIG PPG+M F+L++F E + + L L
Sbjct: 129 LRSIIDKMGSRDFSRIRTGIGNPPGRMAVADFVLKQFRPKELEDFENTCARAADAAGLAL 188
Query: 182 SKGLTESARHFN 193
++G+ + H N
Sbjct: 189 TQGVVYARDHVN 200
>gi|373498804|ref|ZP_09589305.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 12_1B]
gi|371960415|gb|EHO78073.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 12_1B]
Length = 186
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 11/161 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPGDKY TRHN+GFE+I+ + I + + + VL KPQ
Sbjct: 3 LVVGLGNPGDKYAKTRHNIGFEVINKLQKDLNIIGEKDKFQGLLSEKNIDGEKVLFLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSG S + +YK+ + N ++V +DDM LP G LR++ G GGHNG+KS++++
Sbjct: 63 TFMNLSGNSIAAVINFYKIDVKNDMIVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIISHL 122
Query: 139 R--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GIG+ D F+L +F+ +E +D ++
Sbjct: 123 GDEFLRIKCGIGKSKD--DTIDFVLGQFDKSEQETVDKMIE 161
>gi|261416826|ref|YP_003250509.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373282|gb|ACX76027.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 184
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 10/183 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y T HN GF ++ A+ + H T G+ LL KP
Sbjct: 2 YLIVGLGNPGTQYSNTHHNAGFMAVEKLADPSK-DWKSEHKALTMKVNIAGEE-CLLVKP 59
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMNLSGE+ L +YK+ ++ +LVF DD+ L G +R R +G HGG NGL++++ +
Sbjct: 60 QTYMNLSGEAVQALMTWYKVKVDHLLVFSDDINLDVGRIRCRKDGSHGGQNGLRNIIEHV 119
Query: 139 R--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
G+G+ P + D ++L KF+ R + D A+ + +++ G+ +
Sbjct: 120 GDKFPRIRFGVGKCPPKFDLSNWVLAKFSPEDRPKFDEAIAKVPALVECYFKLGIEKCME 179
Query: 191 HFN 193
+N
Sbjct: 180 RYN 182
>gi|69245442|ref|ZP_00603437.1| Peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|257879853|ref|ZP_05659506.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,230,933]
gi|257882579|ref|ZP_05662232.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,502]
gi|257886023|ref|ZP_05665676.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,501]
gi|257891694|ref|ZP_05671347.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,410]
gi|260559526|ref|ZP_05831707.1| peptidyl-tRNA hydrolase [Enterococcus faecium C68]
gi|261206677|ref|ZP_05921375.1| peptidyl-tRNA hydrolase [Enterococcus faecium TC 6]
gi|289565038|ref|ZP_06445492.1| peptidyl-tRNA hydrolase [Enterococcus faecium D344SRF]
gi|293553691|ref|ZP_06674315.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1039]
gi|293563192|ref|ZP_06677648.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1162]
gi|293570114|ref|ZP_06681194.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1071]
gi|294614901|ref|ZP_06694792.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1636]
gi|294618627|ref|ZP_06698166.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1679]
gi|294623703|ref|ZP_06702536.1| peptidyl-tRNA hydrolase [Enterococcus faecium U0317]
gi|314938216|ref|ZP_07845516.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a04]
gi|314943111|ref|ZP_07849910.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133C]
gi|314949308|ref|ZP_07852651.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0082]
gi|314952241|ref|ZP_07855256.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133A]
gi|314992099|ref|ZP_07857549.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133B]
gi|314996282|ref|ZP_07861338.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a01]
gi|383329921|ref|YP_005355805.1| Peptidyl-tRNA hydrolase [Enterococcus faecium Aus0004]
gi|389869736|ref|YP_006377159.1| aminoacyl-tRNA hydrolase [Enterococcus faecium DO]
gi|406579487|ref|ZP_11054718.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD4E]
gi|406581804|ref|ZP_11056939.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD3E]
gi|406584234|ref|ZP_11059269.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD2E]
gi|406589695|ref|ZP_11064122.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD1E]
gi|410937632|ref|ZP_11369491.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD5E]
gi|415892951|ref|ZP_11550050.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4453]
gi|416132451|ref|ZP_11597904.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4452]
gi|424797372|ref|ZP_18222970.1| aminoacyl-tRNA hydrolase [Enterococcus faecium S447]
gi|424847977|ref|ZP_18272514.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R501]
gi|424859973|ref|ZP_18283948.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R499]
gi|424866346|ref|ZP_18290186.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R497]
gi|424952115|ref|ZP_18367153.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R496]
gi|424954016|ref|ZP_18368939.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R494]
gi|424957029|ref|ZP_18371781.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R446]
gi|424960815|ref|ZP_18375296.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1986]
gi|424965080|ref|ZP_18379107.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1190]
gi|424967590|ref|ZP_18381283.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1140]
gi|424970931|ref|ZP_18384405.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1139]
gi|424974714|ref|ZP_18387931.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1137]
gi|424977475|ref|ZP_18390486.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1123]
gi|424979744|ref|ZP_18392578.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV99]
gi|424985877|ref|ZP_18398334.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV69]
gi|424986867|ref|ZP_18399269.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV38]
gi|424989908|ref|ZP_18402150.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV26]
gi|424995154|ref|ZP_18407051.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV168]
gi|424999145|ref|ZP_18410785.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV165]
gi|425001042|ref|ZP_18412578.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV161]
gi|425004985|ref|ZP_18416268.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV102]
gi|425006995|ref|ZP_18418147.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV1]
gi|425011304|ref|ZP_18422213.1| aminoacyl-tRNA hydrolase [Enterococcus faecium E422]
gi|425012932|ref|ZP_18423689.1| aminoacyl-tRNA hydrolase [Enterococcus faecium E417]
gi|425017676|ref|ZP_18428172.1| aminoacyl-tRNA hydrolase [Enterococcus faecium C621]
gi|425020432|ref|ZP_18430737.1| aminoacyl-tRNA hydrolase [Enterococcus faecium C497]
gi|425030236|ref|ZP_18435430.1| aminoacyl-tRNA hydrolase [Enterococcus faecium C1904]
gi|425033018|ref|ZP_18438021.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 515]
gi|425036369|ref|ZP_18441132.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 514]
gi|425041982|ref|ZP_18446354.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 511]
gi|425046803|ref|ZP_18450791.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 510]
gi|425048032|ref|ZP_18451957.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 509]
gi|425053673|ref|ZP_18457203.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 506]
gi|425061482|ref|ZP_18464708.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 503]
gi|427397651|ref|ZP_18890133.1| peptidyl-tRNA hydrolase [Enterococcus durans FB129-CNAB-4]
gi|430821491|ref|ZP_19440098.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0045]
gi|430824328|ref|ZP_19442892.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0120]
gi|430827193|ref|ZP_19445357.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0164]
gi|430830007|ref|ZP_19448076.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0269]
gi|430832568|ref|ZP_19450611.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0333]
gi|430835075|ref|ZP_19453074.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0679]
gi|430837161|ref|ZP_19455136.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0680]
gi|430839947|ref|ZP_19457883.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0688]
gi|430845363|ref|ZP_19463257.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1050]
gi|430847156|ref|ZP_19465003.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1133]
gi|430851334|ref|ZP_19469084.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1185]
gi|430854026|ref|ZP_19471748.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1258]
gi|430856267|ref|ZP_19473966.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1392]
gi|430859207|ref|ZP_19476822.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1552]
gi|430861027|ref|ZP_19478619.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1573]
gi|430867734|ref|ZP_19482632.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1574]
gi|430906592|ref|ZP_19485027.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1575]
gi|430964160|ref|ZP_19487608.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1576]
gi|431014811|ref|ZP_19490353.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1578]
gi|431239324|ref|ZP_19503627.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1622]
gi|431265347|ref|ZP_19506049.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1623]
gi|431312216|ref|ZP_19508866.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1626]
gi|431387262|ref|ZP_19511625.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1627]
gi|431449125|ref|ZP_19513966.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1630]
gi|431512502|ref|ZP_19515929.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1634]
gi|431560976|ref|ZP_19519608.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1731]
gi|431668795|ref|ZP_19524157.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1904]
gi|431744833|ref|ZP_19533699.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2071]
gi|431747453|ref|ZP_19536247.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2134]
gi|431749952|ref|ZP_19538682.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2297]
gi|431756204|ref|ZP_19544842.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2883]
gi|431761116|ref|ZP_19549703.1| peptidyl-tRNA hydrolase [Enterococcus faecium E3346]
gi|431766078|ref|ZP_19554574.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4215]
gi|431768634|ref|ZP_19557068.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1321]
gi|431771730|ref|ZP_19560107.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1644]
gi|431774661|ref|ZP_19562966.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2369]
gi|431777753|ref|ZP_19566004.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2560]
gi|431780449|ref|ZP_19568628.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4389]
gi|431783149|ref|ZP_19571271.1| peptidyl-tRNA hydrolase [Enterococcus faecium E6012]
gi|431784105|ref|ZP_19572150.1| peptidyl-tRNA hydrolase [Enterococcus faecium E6045]
gi|447913806|ref|YP_007395218.1| Peptidyl-tRNA hydrolase [Enterococcus faecium NRRL B-2354]
gi|68195824|gb|EAN10260.1| Peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|257814081|gb|EEV42839.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,230,933]
gi|257818237|gb|EEV45565.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,502]
gi|257821879|gb|EEV49009.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,501]
gi|257828054|gb|EEV54680.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,410]
gi|260074625|gb|EEW62946.1| peptidyl-tRNA hydrolase [Enterococcus faecium C68]
gi|260079170|gb|EEW66863.1| peptidyl-tRNA hydrolase [Enterococcus faecium TC 6]
gi|289163245|gb|EFD11091.1| peptidyl-tRNA hydrolase [Enterococcus faecium D344SRF]
gi|291587486|gb|EFF19370.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1071]
gi|291592187|gb|EFF23805.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1636]
gi|291595146|gb|EFF26484.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1679]
gi|291596918|gb|EFF28136.1| peptidyl-tRNA hydrolase [Enterococcus faecium U0317]
gi|291602266|gb|EFF32494.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1039]
gi|291604842|gb|EFF34320.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1162]
gi|313589526|gb|EFR68371.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a01]
gi|313593313|gb|EFR72158.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133B]
gi|313595636|gb|EFR74481.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133A]
gi|313598170|gb|EFR77015.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133C]
gi|313642412|gb|EFS06992.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a04]
gi|313644314|gb|EFS08894.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0082]
gi|364092989|gb|EHM35304.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4453]
gi|364093286|gb|EHM35569.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4452]
gi|378939615|gb|AFC64687.1| Peptidyl-tRNA hydrolase [Enterococcus faecium Aus0004]
gi|388534985|gb|AFK60177.1| aminoacyl-tRNA hydrolase [Enterococcus faecium DO]
gi|402918626|gb|EJX39298.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R501]
gi|402921219|gb|EJX41678.1| aminoacyl-tRNA hydrolase [Enterococcus faecium S447]
gi|402926051|gb|EJX46119.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R499]
gi|402927722|gb|EJX47657.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R496]
gi|402937801|gb|EJX56873.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R494]
gi|402938826|gb|EJX57799.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R497]
gi|402944661|gb|EJX63059.1| aminoacyl-tRNA hydrolase [Enterococcus faecium R446]
gi|402944960|gb|EJX63339.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1190]
gi|402945752|gb|EJX64083.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1986]
gi|402954080|gb|EJX71735.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1140]
gi|402955671|gb|EJX73182.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1137]
gi|402960424|gb|EJX77568.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1139]
gi|402964960|gb|EJX81708.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV69]
gi|402965755|gb|EJX82445.1| aminoacyl-tRNA hydrolase [Enterococcus faecium P1123]
gi|402968186|gb|EJX84680.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV99]
gi|402975696|gb|EJX91636.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV38]
gi|402978053|gb|EJX93818.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV168]
gi|402980103|gb|EJX95732.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV165]
gi|402980830|gb|EJX96410.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV26]
gi|402987654|gb|EJY02701.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV161]
gi|402988026|gb|EJY03055.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV102]
gi|402995982|gb|EJY10394.1| aminoacyl-tRNA hydrolase [Enterococcus faecium ERV1]
gi|402997469|gb|EJY11790.1| aminoacyl-tRNA hydrolase [Enterococcus faecium E422]
gi|403002271|gb|EJY16264.1| aminoacyl-tRNA hydrolase [Enterococcus faecium E417]
gi|403003815|gb|EJY17670.1| aminoacyl-tRNA hydrolase [Enterococcus faecium C1904]
gi|403003884|gb|EJY17733.1| aminoacyl-tRNA hydrolase [Enterococcus faecium C621]
gi|403009238|gb|EJY22697.1| aminoacyl-tRNA hydrolase [Enterococcus faecium C497]
gi|403011425|gb|EJY24735.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 515]
gi|403015004|gb|EJY27952.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 514]
gi|403023140|gb|EJY35426.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 510]
gi|403025004|gb|EJY37116.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 511]
gi|403029333|gb|EJY41094.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 506]
gi|403031758|gb|EJY43348.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 509]
gi|403041230|gb|EJY52258.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 503]
gi|404455523|gb|EKA02370.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD4E]
gi|404458992|gb|EKA05365.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD3E]
gi|404464424|gb|EKA09965.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD2E]
gi|404470447|gb|EKA15080.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD1E]
gi|410733765|gb|EKQ75687.1| peptidyl-tRNA hydrolase [Enterococcus sp. GMD5E]
gi|425721962|gb|EKU84862.1| peptidyl-tRNA hydrolase [Enterococcus durans FB129-CNAB-4]
gi|430438407|gb|ELA48841.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0045]
gi|430441343|gb|ELA51458.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0120]
gi|430444373|gb|ELA54228.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0164]
gi|430479325|gb|ELA56581.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0269]
gi|430479854|gb|ELA57064.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0333]
gi|430484743|gb|ELA61705.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0679]
gi|430487591|gb|ELA64311.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0680]
gi|430490187|gb|ELA66729.1| peptidyl-tRNA hydrolase [Enterococcus faecium E0688]
gi|430495768|gb|ELA71904.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1050]
gi|430534296|gb|ELA74757.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1185]
gi|430537829|gb|ELA78144.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1133]
gi|430539703|gb|ELA79943.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1258]
gi|430544049|gb|ELA84094.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1552]
gi|430545100|gb|ELA85094.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1392]
gi|430550121|gb|ELA89930.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1574]
gi|430550616|gb|ELA90399.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1573]
gi|430554550|gb|ELA94152.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1575]
gi|430555221|gb|ELA94765.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1576]
gi|430559635|gb|ELA98983.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1578]
gi|430571931|gb|ELB10803.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1622]
gi|430576182|gb|ELB14851.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1623]
gi|430579165|gb|ELB17701.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1626]
gi|430580819|gb|ELB19285.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1627]
gi|430585517|gb|ELB23802.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1630]
gi|430586421|gb|ELB24678.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1634]
gi|430589817|gb|ELB27917.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1731]
gi|430599961|gb|ELB37643.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1904]
gi|430604993|gb|ELB42415.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2071]
gi|430606280|gb|ELB43638.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2134]
gi|430610903|gb|ELB48033.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2297]
gi|430615659|gb|ELB52603.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2883]
gi|430622490|gb|ELB59211.1| peptidyl-tRNA hydrolase [Enterococcus faecium E3346]
gi|430627148|gb|ELB63665.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4215]
gi|430628856|gb|ELB65286.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1321]
gi|430632720|gb|ELB68921.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1644]
gi|430633546|gb|ELB69701.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2369]
gi|430639046|gb|ELB74937.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2560]
gi|430639861|gb|ELB75716.1| peptidyl-tRNA hydrolase [Enterococcus faecium E4389]
gi|430645822|gb|ELB81324.1| peptidyl-tRNA hydrolase [Enterococcus faecium E6012]
gi|430650146|gb|ELB85500.1| peptidyl-tRNA hydrolase [Enterococcus faecium E6045]
gi|445189515|gb|AGE31157.1| Peptidyl-tRNA hydrolase [Enterococcus faecium NRRL B-2354]
Length = 186
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF ++D A + +A + F +LL KPQ
Sbjct: 3 MIVGLGNPGTKYQYTKHNIGFMVVDKIAREHQATFKKNPFEAEVAEFFHNGEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLN 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G+ +L F+ + I+ ++ + V+ ++ L+ ++
Sbjct: 123 TNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESMCQSVKAVEYLIEGHSFVDAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NRFN 186
>gi|257888640|ref|ZP_05668293.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,141,733]
gi|257897405|ref|ZP_05677058.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com12]
gi|431043716|ref|ZP_19493006.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1590]
gi|431753372|ref|ZP_19542046.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2620]
gi|431758724|ref|ZP_19547349.1| peptidyl-tRNA hydrolase [Enterococcus faecium E3083]
gi|431763488|ref|ZP_19552038.1| peptidyl-tRNA hydrolase [Enterococcus faecium E3548]
gi|257824694|gb|EEV51626.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,141,733]
gi|257833970|gb|EEV60391.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com12]
gi|430561304|gb|ELB00574.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1590]
gi|430612279|gb|ELB49330.1| peptidyl-tRNA hydrolase [Enterococcus faecium E2620]
gi|430617092|gb|ELB53978.1| peptidyl-tRNA hydrolase [Enterococcus faecium E3083]
gi|430622261|gb|ELB58998.1| peptidyl-tRNA hydrolase [Enterococcus faecium E3548]
Length = 186
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF ++D A + +A + F +LL KPQ
Sbjct: 3 MIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQAAFKKNPFEAEVAEFFHNGEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLN 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G+ +L F+ + I+ ++ + V+ ++ L+ ++
Sbjct: 123 TNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFVDAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NQFN 186
>gi|425055287|ref|ZP_18458768.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 505]
gi|403034229|gb|EJY45693.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 505]
Length = 197
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF ++D A + +A + F +LL KPQ
Sbjct: 14 MIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQATFKKNPFEAEVAEFFHNGEKILLVKPQ 73
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 74 TFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLN 133
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G+ +L F+ + I+ ++ + V+ ++ L+ ++
Sbjct: 134 TNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESMFQSVKAVEYLIEGHSFVDAM 193
Query: 190 RHFN 193
FN
Sbjct: 194 NQFN 197
>gi|256545181|ref|ZP_05472547.1| aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170]
gi|256399222|gb|EEU12833.1| aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170]
Length = 194
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+ VGLGNPG +Y+ TRHN GF ID A I + + K+ GQG + V+L KP
Sbjct: 2 YYIVGLGNPGIQYENTRHNAGFITIDYLARKYSIDVRKIKFKSLIGQGVISGQKVMLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMN SGE+ + Y+ ++++V +DD+ + G +R+R G G HNG+KS++ N
Sbjct: 62 QTYMNNSGEAIREIYKYFDFDHDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIYNL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+G+ P MD F+L F+ + I+ ++ + ++++L +G+ ++
Sbjct: 122 EFDDFPRIKVAVGKKPSYMDLANFVLSGFSKQEVKIIEEEVKFASDAIEMILEEGIEKTM 181
Query: 190 RHFNT 194
FN+
Sbjct: 182 SMFNS 186
>gi|302877723|ref|YP_003846287.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
gi|302580512|gb|ADL54523.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
Length = 192
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 17/183 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATF----GQGFVGDAPVLL 75
L VGLGNPG +Y+ TRHNVGF +D AE ++ + +A F +G V ++L
Sbjct: 6 LIVGLGNPGREYEATRHNVGFWWVDELAEEAELNFKS---EAKFHGLSARGLVLGRELIL 62
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 135
KPQT+MNLSG S G LA +YK+ ++LV HD++ L G+ RL+ G HGGHNGLK ++
Sbjct: 63 LKPQTFMNLSGRSVGALAQFYKIAPAQILVVHDELDLQPGIARLKLGGSHGGHNGLKDII 122
Query: 136 NNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
GIG P + F+L RE + A + ++VL +L G
Sbjct: 123 AQLGGREFWRLRLGIGHPGDRAQVSDFVLGHPREAERELMLEAQHQSMQVLPSVLD-GKM 181
Query: 187 ESA 189
E+A
Sbjct: 182 EAA 184
>gi|227487498|ref|ZP_03917814.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541226|ref|ZP_03971275.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092480|gb|EEI27792.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182999|gb|EEI63971.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 168
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
WL VGLGNPG +Y TRHNVGF ++DA A G+ KP
Sbjct: 12 WLVVGLGNPGPEYAETRHNVGFRVVDALAARAGVK---------------------FCKP 50
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMN SGE+ PLA YK+P R++V HD++ LP G +++R G GHNGLKSV
Sbjct: 51 QTYMNRSGEAVAPLARRYKVPPERIIVVHDELDLPEGRIKVRLGGNENGHNGLKSVSECL 110
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRPP ++L IA E ++ +L +G +
Sbjct: 111 GTRDYIRVRVGIGRPPAGTGVADWVLGTGGPIA---------GAPEAVRAILEEGFATAQ 161
Query: 190 RHFNT 194
H N
Sbjct: 162 SHINA 166
>gi|227552671|ref|ZP_03982720.1| aminoacyl-tRNA hydrolase [Enterococcus faecium TX1330]
gi|293378836|ref|ZP_06624991.1| aminoacyl-tRNA hydrolase [Enterococcus faecium PC4.1]
gi|424762090|ref|ZP_18189616.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1337RF]
gi|227178200|gb|EEI59172.1| aminoacyl-tRNA hydrolase [Enterococcus faecium TX1330]
gi|292642377|gb|EFF60532.1| aminoacyl-tRNA hydrolase [Enterococcus faecium PC4.1]
gi|402425818|gb|EJV57963.1| aminoacyl-tRNA hydrolase [Enterococcus faecium TX1337RF]
Length = 197
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF ++D A + +A + F +LL KPQ
Sbjct: 14 MIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQAAFKKNPFEAEVAEFFHNGEKILLVKPQ 73
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 74 TFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLN 133
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G+ +L F+ + I+ ++ + V+ ++ L+ ++
Sbjct: 134 TNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFVDAM 193
Query: 190 RHFN 193
FN
Sbjct: 194 NQFN 197
>gi|424789588|ref|ZP_18216233.1| aminoacyl-tRNA hydrolase [Enterococcus faecium V689]
gi|425038381|ref|ZP_18442999.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 513]
gi|402921864|gb|EJX42282.1| aminoacyl-tRNA hydrolase [Enterococcus faecium V689]
gi|403019628|gb|EJY32215.1| aminoacyl-tRNA hydrolase [Enterococcus faecium 513]
Length = 186
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY+ T+HN+GF ++D A + +A + F +LL KPQ
Sbjct: 3 MIVGLGNPGTKYQYTKHNIGFMVVDKIAREHQATFKKNPFEAEVAEFFHNGEKILLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLTVGKIRLRQKGSAGGHNGIKSIISHLN 122
Query: 140 ---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTESA 189
GIGRP G+ +L F+ + I+ ++ + V+ ++ L+ ++
Sbjct: 123 TNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESMCQSVKAVEYLIEGHSFVDAM 182
Query: 190 RHFN 193
FN
Sbjct: 183 NRFN 186
>gi|326383811|ref|ZP_08205496.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
gi|326197575|gb|EGD54764.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
Length = 188
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 110/190 (57%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG Y+ TRHNVG + D S G +VH + A +G PVL+AK
Sbjct: 3 LIVGLGNPGPAYEKTRHNVGAMVADGLVSSHGEKF-SVHKRSGALTATVRIGGEPVLVAK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
+TYMN++G GPLA+YY + ++V HD++ + G +RL+ GG GGHNGL+S+
Sbjct: 62 SRTYMNVTGRQIGPLASYYSVAPQDLIVLHDELDIDFGAVRLKLGGGEGGHNGLRSISQT 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F A ++ + GV+ +LL+ +GL E+
Sbjct: 122 IGTRDYLRVRLGIGRPPGRQDPADFVLKPFPGSAAAEVELLVANGVDAAELLVEQGL-EA 180
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 181 AQ--NTVHAW 188
>gi|340759267|ref|ZP_08695839.1| peptidyl-tRNA hydrolase [Fusobacterium varium ATCC 27725]
gi|251835462|gb|EES64002.1| peptidyl-tRNA hydrolase [Fusobacterium varium ATCC 27725]
Length = 186
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPGDKY TRHN+GFE+I E I + + + VL KPQ
Sbjct: 3 LVVGLGNPGDKYAKTRHNIGFEVISKLQEELNIVGEKDKFQGLLSEKNIDGEKVLFLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSG S + +YK+ + ++V +DDM LP G LR++ G GGHNG+KS++++
Sbjct: 63 TFMNLSGNSIAAVVNFYKIDAKKDMIVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIISHL 122
Query: 139 R--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 175
GIG+ D F+L +F+ +E +D ++ +
Sbjct: 123 GDEFLRIKCGIGKSKD--DTIDFVLGQFDKSEQEVVDKMIENAAD 165
>gi|421880159|ref|ZP_16311557.1| Peptidyl-tRNA hydrolase [Helicobacter bizzozeronii CCUG 35545]
gi|375317626|emb|CCF79553.1| Peptidyl-tRNA hydrolase [Helicobacter bizzozeronii CCUG 35545]
Length = 186
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 96/167 (57%), Gaps = 15/167 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNP Y TRHNVGF+++D+ A+S GIS T K VG LL KP
Sbjct: 2 LIVGLGNPTPAYAHTRHNVGFDILDSLAQSLGISF-THASKYQADYAKVGVQGYLL-KPM 59
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
TYMNLSG + Y+ + VL+ HDD+ LP G +R + GGHGGHNGLKS+ ++
Sbjct: 60 TYMNLSGRALAAFLRYHDI--QSVLIVHDDLDLPLGAVRFKSKGGHGGHNGLKSIEQHYP 117
Query: 140 --------GIGRPPGQMDPKAFLLQKFN---AIARERIDTALQEGVE 175
GIGR + D A++LQ+F+ + +E+I T ++ +E
Sbjct: 118 HPVYKMKIGIGRSVFKHDTIAYVLQRFSPEQEVLKEQIFTHARQALE 164
>gi|238855037|ref|ZP_04645365.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|260664821|ref|ZP_05865672.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
gi|313472623|ref|ZP_07813112.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|238832281|gb|EEQ24590.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|239529424|gb|EEQ68425.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|260561304|gb|EEX27277.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
Length = 185
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG KY T+HN GF +D + G+S+N + F + + V+L +PQ
Sbjct: 3 IIAGLGNPGKKYDRTKHNTGFMCLDNYMAKNGLSLNQNKFEGLFTKEKIAGEDVILLEPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN--- 136
TYMN SG S +A ++K+ + +L+ DDM +P G +R+R NG GGHNG+KS++
Sbjct: 63 TYMNESGRSISQVANFFKIDPSDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDLG 122
Query: 137 ----NFRGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
N IG R P +++L FN ++ +DTA ++L +S
Sbjct: 123 TEKFNRLKIGIRHPENTTVVSWVLTPFNNEQQKLMDTAFSTSEDILADFIS 173
>gi|347755343|ref|YP_004862907.1| peptidyl-tRNA hydrolase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587861|gb|AEP12391.1| peptidyl-tRNA hydrolase [Candidatus Chloracidobacterium
thermophilum B]
Length = 187
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 14/185 (7%)
Query: 22 VGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTY 81
VGLGNPG Y TRHN+GF ++DA AE G + C+A G+ +G VLLAKPQT+
Sbjct: 5 VGLGNPGATYALTRHNIGFLVVDALAERAGRPIKLAECEALTGRITLGTEVVLLAKPQTF 64
Query: 82 MNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR- 139
MN SG++ L A Y P + +L DD+ LP G LRLR G GGHNGLKS+ +
Sbjct: 65 MNASGQAVALLCAKYDCNPQHDLLAVVDDVALPFGRLRLRAKGSAGGHNGLKSLNAKLKT 124
Query: 140 --------GIG--RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P G + F+L +F+A + + + ++ + G+ +
Sbjct: 125 EHYARLRVGIGPAHPVGNLAD--FVLSRFSAAEQSELPALTARAADAVEAWVCHGIELAM 182
Query: 190 RHFNT 194
FN
Sbjct: 183 ARFNA 187
>gi|422541012|ref|ZP_16616870.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA1]
gi|314969388|gb|EFT13486.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA1]
Length = 200
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-----------TVHCKATFGQGF 67
WL +GLGNPG +Y GTRHNVG ++I G ++ T A G
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 68 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
V V+L + +TYMN SG + +A++ + + ++V HD++ L G LRL+ GG G
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITRDHLIVVHDEIDLDPGRLRLKKGGGDNG 124
Query: 128 HNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
HNGLKS+ + R G+GRPPG DP ++L + A R + + + ++
Sbjct: 125 HNGLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAVE 184
Query: 179 LLLSKGLTESARHFNT 194
++ +GL + FN+
Sbjct: 185 SIIIQGLAAAQNRFNS 200
>gi|427430893|ref|ZP_18920607.1| Peptidyl-tRNA hydrolase [Caenispirillum salinarum AK4]
gi|425878384|gb|EKV27101.1| Peptidyl-tRNA hydrolase [Caenispirillum salinarum AK4]
Length = 255
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 95/184 (51%), Gaps = 11/184 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG Y RHN+GF D G S +A + G +G V++ KP
Sbjct: 3 LVVGLGNPGAGYAKNRHNIGFMAADEIVRRHGFSAWKSKFQADYADGMIGGEKVMVLKPM 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMNLSG+S G ++K+ V+V +D++ L G +R++ GGH GHNGL+S+ +
Sbjct: 63 TYMNLSGQSVGDACRFFKILPRDVIVLYDEIELAPGKIRVKQGGGHAGHNGLRSIDQHIG 122
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
G+GRPPG+ ++L F+ A E T L E V L+ KG + R
Sbjct: 123 KDYWRVRLGVGRPPGKEQVAKYVLHDFSK-AEEAWLTPLLESVATHMPLMVKG--DEGRF 179
Query: 192 FNTI 195
N +
Sbjct: 180 MNKV 183
>gi|42518363|ref|NP_964293.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii NCC 533]
gi|68052979|sp|Q74LA8.1|PTH_LACJO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41582648|gb|AAS08259.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii NCC 533]
Length = 185
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 8/166 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG KY T+HN GF +D + E G++++ + + + + V+ +PQ
Sbjct: 3 LITGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKNKFEGLWTKQKINGEDVIFLEPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG+S +A ++K+ +LV HDDM +P G +R+R NG GGHNG+KS+M
Sbjct: 63 TFMNDSGKSIAQVANFFKIKPEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACLG 122
Query: 136 -NNFRGIG---RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
NNF + R P +++L FN ++ +D A + V+
Sbjct: 123 TNNFNRLKIGIRHPENESVVSWVLSPFNNDQQKLMDAAFETSENVI 168
>gi|159027229|emb|CAO89324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 223
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 18/190 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP--- 72
P L +GLGNP KY TRHN+GFE +D+ A G+S F QGF+ GD P
Sbjct: 27 PQLIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPFPG 82
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG+
Sbjct: 83 KIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGI 142
Query: 132 KSVM-----NNFRGIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS++ NF + G+ KA + L +F E I L + ++L L +
Sbjct: 143 KSMIAHVGTENFARLRIGIGKSSEKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQ 202
Query: 184 GLTESARHFN 193
GL ++ +N
Sbjct: 203 GLQKAMSLYN 212
>gi|417838717|ref|ZP_12484955.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii pf01]
gi|338762260|gb|EGP13529.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii pf01]
Length = 185
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 8/166 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG KY T+HN GF +D + E G++++ + + + + V+ +PQ
Sbjct: 3 LIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKEKFEGLWTKQKINGEDVIFLEPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG+S +A ++K+ +LV HDDM +P G +R+R NG GGHNG+KS+M
Sbjct: 63 TFMNDSGKSIAQVANFFKIKPEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACLG 122
Query: 136 -NNFRGIG---RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
NNF + R P +++L FN ++ +D A + V+
Sbjct: 123 TNNFNRLKIGIRHPENESVVSWVLSPFNNDQQKLMDAAFETSENVI 168
>gi|154507724|ref|ZP_02043366.1| hypothetical protein ACTODO_00206 [Actinomyces odontolyticus ATCC
17982]
gi|153797358|gb|EDN79778.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus ATCC 17982]
Length = 200
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVGD 70
PWL VGLGNPG +Y TRHNVG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYAFTRHNVGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVPG 65
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V+LA+ +YMN SG LA ++K+ +R+LV HDDM LP LRL+ GG GGHNG
Sbjct: 66 PRVILARSDSYMNTSGGPISALATFHKIDPSRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
LKS+ + G+GRPPG+MDP ++L + R D ++ +V++ ++
Sbjct: 126 LKSLSQHLGTRDYARLRIGVGRPPGRMDPADYVLATLPSKERSEWDVTFEQAADVVEDIV 185
Query: 182 SKGLTESARHFNT 194
+KG + +T
Sbjct: 186 TKGFAPTQMALHT 198
>gi|254464216|ref|ZP_05077627.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium Y4I]
gi|206685124|gb|EDZ45606.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium Y4I]
Length = 235
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY+ RHN+GF +D A G S +A +G +G VLL KPQ
Sbjct: 11 LFVGLGNPGPKYERNRHNIGFMALDQIASDHGFSPWKSKFQALISEGTLGGEKVLLLKPQ 70
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S G +YKL V+V HD++ L G R++ GGH GHNGL+S+ ++
Sbjct: 71 TFMNLSGQSVGEAMRFYKLTPADVVVLHDELDLAPGKARMKQGGGHAGHNGLRSIHSHIG 130
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
GIG P + ++L+ F +D L G+ L+KG
Sbjct: 131 ADYARVRLGIGHPGHKDAVAGYVLRDFPKTDEGWLDD-LMRGISDGAAELAKG 182
>gi|443655654|ref|ZP_21131509.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa DIANCHI905]
gi|443333572|gb|ELS48126.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa DIANCHI905]
Length = 208
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 18/190 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP--- 72
P L +GLGNP KY TRHN+GFE +D+ A G+S F QGF+ GD P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPFPG 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG+
Sbjct: 68 KIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGI 127
Query: 132 KSVM-----NNFRGIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS++ NF + G+ KA + L +F E I L + ++L L +
Sbjct: 128 KSMIAHVGTENFARLRIGIGKSSEKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQ 187
Query: 184 GLTESARHFN 193
GL ++ +N
Sbjct: 188 GLQKAMSLYN 197
>gi|283780444|ref|YP_003371199.1| peptidyl-tRNA hydrolase [Pirellula staleyi DSM 6068]
gi|283438897|gb|ADB17339.1| peptidyl-tRNA hydrolase [Pirellula staleyi DSM 6068]
Length = 189
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+GTRHNVGFE++ A + QG +G +LL KP
Sbjct: 3 LIVGLGNPGSRYQGTRHNVGFEVVSIVARRVQATAEREQFSGLVSQGNLGPEKMLLLKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN+SG S +YK+ +L+ DD LP G LR R G GG GL V+
Sbjct: 63 TFMNVSGSSVLAARDFYKIETADILIICDDFALPLGKLRFRAKGSSGGQKGLDDVIRRLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
GIG PP D F+L +FN + + + Q + ++ + +G+
Sbjct: 123 TDAVPRLRVGIGAPPSGWDVANFVLSRFNKDEQIEAEISWQLAADGVQTFVQEGIQACMN 182
Query: 191 HFNT 194
FN
Sbjct: 183 KFNA 186
>gi|420155302|ref|ZP_14662166.1| aminoacyl-tRNA hydrolase [Clostridium sp. MSTE9]
gi|394759421|gb|EJF42176.1| aminoacyl-tRNA hydrolase [Clostridium sp. MSTE9]
Length = 203
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 10/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ TRHN GF ++D A++ G+ ++ + K + G VLL KP
Sbjct: 19 IIVGLGNPGRQYEQTRHNTGFMVLDRLAQTLGVKIDRLKFKGLCAEATFGGKKVLLLKPS 78
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MNLSG+S +YKLP +V++ DD+ L G LR+R G GG NG+K+++
Sbjct: 79 TFMNLSGQSVIEAMRFYKLPPEQVIIVFDDISLAPGHLRIRRKGSDGGQNGMKNIIYLSG 138
Query: 136 -NNF----RGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ F GIG +P + + ++L F+A + + A+ + L+L++ E+
Sbjct: 139 SDAFPRVKMGIGAKPNPEWNLADWVLSTFSAQEAKNLSEAIDHAIHALELMVQGKTDEAM 198
Query: 190 RHFNT 194
FN+
Sbjct: 199 NRFNS 203
>gi|406658908|ref|ZP_11067048.1| aminoacyl-tRNA hydrolase [Streptococcus iniae 9117]
gi|405579123|gb|EKB53237.1| aminoacyl-tRNA hydrolase [Streptococcus iniae 9117]
Length = 189
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAKP 78
+ VGLGNPG KY T+HN+GF ID A+ GI+ + KA G F+ + L KP
Sbjct: 4 MIVGLGNPGSKYDNTKHNIGFTAIDQMAKKHGINFTEEKNFKALIGSTFINHEKIYLVKP 63
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MN SG S L YY + +N +++ +DD+ + G +R R G GGHNG+KS++ +
Sbjct: 64 ITFMNNSGISVKALLTYYNISVNDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHI 123
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIGRP M +L KF++ I L++ + + L + E
Sbjct: 124 GTQEFDRIKIGIGRPKQGMTVINHVLGKFDSDDSITIALTLEKVSDAVAFYLQENNFEK- 182
Query: 190 RHFNTIQKY 198
T+QKY
Sbjct: 183 ----TMQKY 187
>gi|359767553|ref|ZP_09271339.1| peptidyl-tRNA hydrolase [Gordonia polyisoprenivorans NBRC 16320]
gi|378716897|ref|YP_005281786.1| peptidyl-tRNA hydrolase Pth [Gordonia polyisoprenivorans VH2]
gi|359314948|dbj|GAB24172.1| peptidyl-tRNA hydrolase [Gordonia polyisoprenivorans NBRC 16320]
gi|375751600|gb|AFA72420.1| peptidyl-tRNA hydrolase Pth [Gordonia polyisoprenivorans VH2]
Length = 188
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG KY+ TRHN+G + D S G +VH + A + VL+AK
Sbjct: 3 LIVGLGNPGPKYEKTRHNIGAMVADHLVTSAG-GRYSVHKRSGAEVASIPLAGGSVLVAK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
+TYMN G GPLA +Y + + ++V HD++ + G++RL+ GG GGHNGL+SV +
Sbjct: 62 ARTYMNTVGRQIGPLAKFYSVTPDDLIVLHDELDIDFGLVRLKRGGGEGGHNGLRSVSQS 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F + AR +D ++ G + ++LLL+ GL E+
Sbjct: 122 VGTRDYLRVRLGIGRPPGRQDPADFVLKPFPSAARAEVDLLIEHGADAVELLLTAGL-EA 180
Query: 189 ARHFNTIQKY 198
A+ NT+ +
Sbjct: 181 AQ--NTVHAW 188
>gi|314937291|ref|ZP_07844633.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|418619051|ref|ZP_13181893.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis VCU122]
gi|313654587|gb|EFS18337.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|374825757|gb|EHR89680.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis VCU122]
Length = 190
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE+ID + +++ K + + VL +P T
Sbjct: 4 IVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ GPL YY + + ++V +DDM L G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVGPLMDYYNVEVEDLIVLYDDMDLSQGNIRLRQKGSAGGHNGMKSIIKHLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+GRP M ++LQKF+ ++ ++ + ++ + E++R
Sbjct: 124 DQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFI-----ETSRF 178
Query: 192 FNTIQKY 198
+ + +Y
Sbjct: 179 DHVMNEY 185
>gi|159036392|ref|YP_001535645.1| aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
gi|157915227|gb|ABV96654.1| Aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
Length = 196
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 105/184 (57%), Gaps = 14/184 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATF----GQGFVGDAPV 73
PWL VGLGNPG +Y G RHNVGF + D AE G H +A G+ G +
Sbjct: 7 PWLVVGLGNPGREYAGNRHNVGFLVADLLAERLGARFGR-HKRAVAEVAEGRLGFGGPRL 65
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
+L KP TYMNLSG + LA +YK+P RV+ HD++ +P G +RL+ GG GGHNG++S
Sbjct: 66 VLVKPLTYMNLSGSAVAGLAQFYKVPPARVVAVHDELDIPYGQVRLKCGGGEGGHNGVRS 125
Query: 134 VMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
+ + G+GRPP + DP F+L F + R+ +D + +V++ ++ +G
Sbjct: 126 MTKSLGTKEYVRVRFGVGRPPARRDPADFVLSDFGTVERKELDFLVDRAADVVESIVLRG 185
Query: 185 LTES 188
+ +
Sbjct: 186 VEPT 189
>gi|440756699|ref|ZP_20935899.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa TAIHU98]
gi|440172728|gb|ELP52212.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa TAIHU98]
Length = 208
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 18/190 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP--- 72
P L +GLGNP KY TRHN+GFE +D+ A G+S F QGF+ GD P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPFPG 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG+
Sbjct: 68 KIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGI 127
Query: 132 KSVM-----NNFRGIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS++ NF + G+ KA + L +F + I L + ++L L +
Sbjct: 128 KSMIAHVGTENFARLRIGIGKSSEKATISHVLGRFTPQENQVILKVLDLSRKAIELGLKQ 187
Query: 184 GLTESARHFN 193
GL +S +N
Sbjct: 188 GLQKSMSLYN 197
>gi|228476232|ref|ZP_04060935.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
gi|228269717|gb|EEK11216.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
Length = 190
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE+ID + +++ K + + VL +P T
Sbjct: 4 IVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ GPL YY + + ++V +DDM L G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVGPLMDYYNVEVEDLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIKHLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+GRP M ++LQKF+ ++ ++ + ++ + E++R
Sbjct: 124 DQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFI-----ETSRF 178
Query: 192 FNTIQKY 198
+ + +Y
Sbjct: 179 DHVMNEY 185
>gi|385800629|ref|YP_005837033.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
gi|309389993|gb|ADO77873.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
Length = 185
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 10/183 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG KY TRHN+GF +I+ A+ I+ ++ G F+G V++ +P
Sbjct: 3 VIAGLGNPGQKYAQTRHNIGFMVINELAKRFKIN-SSYKFDGLIGDFFLGSEKVIIFQPL 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
YMN SG+ L Y+ + +LV HDD+ L G ++ + NG GGHNG+KS++NN
Sbjct: 62 QYMNKSGQPIYKLLDYFNIESENLLVIHDDLDLDLGKIKFKQNGSSGGHNGIKSIINNLG 121
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GIGRPP + F+L F + +++ + + + ++L+L + + ++
Sbjct: 122 TKEFKRLKIGIGRPPENVPVPDFVLTTFKSESKKIAEQTVAKAASAVELMLKEDIMKAMN 181
Query: 191 HFN 193
+N
Sbjct: 182 KYN 184
>gi|312134558|ref|YP_004001896.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
gi|311774609|gb|ADQ04096.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
Length = 189
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPGD+Y TRHN GF ID A+ ++ + K G VLL KP
Sbjct: 3 YIIAGLGNPGDRYTFTRHNAGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SGES +YK+ +++V +DD+ G++++R G GGHNG+KS++
Sbjct: 63 MTYMNASGESIKEAVNFYKIKPEKLIVIYDDIAFDVGIVKMRKKGSDGGHNGVKSIIQCL 122
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P + D ++L +F +E+I A+++ +K+LL + +
Sbjct: 123 GTEEFPRIRIGIGIP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRAM 180
Query: 190 RHFN 193
+ N
Sbjct: 181 NYIN 184
>gi|308235055|ref|ZP_07665792.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14018 = JCM
11026]
gi|311114597|ref|YP_003985818.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
gi|415702373|ref|ZP_11458595.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 284V]
gi|415707320|ref|ZP_11462137.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 0288E]
gi|415712010|ref|ZP_11464506.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 55152]
gi|415715375|ref|ZP_11465886.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 1400E]
gi|417556688|ref|ZP_12207745.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 315-A]
gi|310946091|gb|ADP38795.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
gi|333602376|gb|EGL13806.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 315-A]
gi|388053702|gb|EIK76682.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 284V]
gi|388053859|gb|EIK76820.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 0288E]
gi|388057237|gb|EIK80069.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 55152]
gi|388058406|gb|EIK81198.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 1400E]
Length = 199
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 23/195 (11%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVL 74
WL VGLGNPG KY+GTRHN+GF + D +E IS + + G+G + A
Sbjct: 6 WLIVGLGNPGSKYEGTRHNMGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKFF 65
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAKP T+MN SG + +++YY++ + +++ HDDM L G ++++ G GGHNG++S+
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIETDHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRSI 125
Query: 135 MNNFRGIGRPP----------GQMDPKA------FLLQKFNAIARERIDTALQEGVEVLK 178
R +G P Q A ++L F + + L +G + ++
Sbjct: 126 D---RSLGTPQYARVRMGVGHAQRGAHAHDNTVNWVLGGFAGAQKSELPNFLADGADAVE 182
Query: 179 LLLSKGLTESARHFN 193
++ +GL+ + HFN
Sbjct: 183 SVIFRGLSATQEHFN 197
>gi|422439551|ref|ZP_16516373.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA3]
gi|422472719|ref|ZP_16549200.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA2]
gi|422572486|ref|ZP_16648055.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL044PA1]
gi|313835377|gb|EFS73091.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA2]
gi|314929234|gb|EFS93065.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL044PA1]
gi|314972373|gb|EFT16470.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA3]
Length = 200
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK---------ATFGQGF-V 68
WL +GLGNPG +Y GTRHNVG ++I G +++ + ++ G G
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVITELCRRVGENLSPARGQRAELVRTRLSSAGLGIPA 64
Query: 69 GDA-PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
DA V L + +TYMN SG + +A + + + ++V HD++ L G LR++ GG G
Sbjct: 65 ADAQTVTLMRSRTYMNESGIAVRKVADFSGITPDHLIVVHDEIDLDPGRLRIKKGGGDNG 124
Query: 128 HNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
HNGLKS+ + R G+GRPPG+ DP ++L + A R +D + + ++
Sbjct: 125 HNGLKSIRVHIRTGDFIRVRVGVGRPPGRQDPADWVLARVPARQRADMDARVALAADAVE 184
Query: 179 LLLSKGLTESARHFNT 194
+++++GL + FN+
Sbjct: 185 MIITQGLAATQNRFNS 200
>gi|451943682|ref|YP_007464318.1| peptidyl-tRNA hydrolase [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
gi|451903069|gb|AGF71956.1| peptidyl-tRNA hydrolase [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
Length = 184
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 16/158 (10%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAES--QGISMNTVHCK-----ATFGQGFVGD 70
P L VGLGNPG KY TRHN+G +++ A+ + TVH + A G +G
Sbjct: 5 PILIVGLGNPGPKYADTRHNIGVRVLEELADRVRPMPASLTVHKRSNTEIAELPAGRLGA 64
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V+LA+ +++MNLSG LA Y+ + V+V HD++ L GV+RLR GG GHNG
Sbjct: 65 RKVVLARTRSFMNLSGGPVKALATYFAVAPADVIVIHDELELDFGVVRLRTGGGDHGHNG 124
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFN 159
LKSV + GIGRPPG+MDP F+L+ F
Sbjct: 125 LKSVTKSLGTKDYQRLAIGIGRPPGRMDPAGFVLKPFT 162
>gi|425444180|ref|ZP_18824236.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9443]
gi|425456035|ref|ZP_18835746.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9807]
gi|389730483|emb|CCI05236.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9443]
gi|389802969|emb|CCI18052.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9807]
Length = 208
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 18/190 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP--- 72
P L +GLGNP KY TRHN+GFE +D+ A G+S F QGF+ GD P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPLPG 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG+
Sbjct: 68 KIRLLKPQTYMNRSGQSVRAVLDWYKLEPESILVIYDDMDLPLGRLRIRLSGSAGGHNGI 127
Query: 132 KSVM-----NNFRGIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS++ NF + G+ KA + L +F E I L + ++L L +
Sbjct: 128 KSMIAHVGTENFARLRIGIGKSTEKATISHVLGRFTPQENEVILKVLDLSRKAIELGLKQ 187
Query: 184 GLTESARHFN 193
GL ++ +N
Sbjct: 188 GLQKAMSLYN 197
>gi|168704118|ref|ZP_02736395.1| peptidyl-tRNA hydrolase [Gemmata obscuriglobus UQM 2246]
Length = 213
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 84/148 (56%), Gaps = 10/148 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG KY GTRHNVGF++ID A G+ +A + GD VLL KP
Sbjct: 3 VIVGLGNPGPKYAGTRHNVGFDVIDYLANGPGVGSARERFEALISETKEGDETVLLVKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG + + +YK+P+ VLV DD+ LP G LR+R G HGG NGL+++
Sbjct: 63 TFMNLSGRAVRAILDFYKVPVENVLVICDDLNLPLGKLRMRIKGSHGGQNGLRNIQEQLG 122
Query: 139 --------RGIGRPPGQMDPKAFLLQKF 158
G+G+ P D F+L KF
Sbjct: 123 TDAYCRLRVGLGQ-PAVGDAVDFVLGKF 149
>gi|187736599|ref|YP_001878711.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
gi|238691875|sp|B2UPQ2.1|PTH_AKKM8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187426651|gb|ACD05930.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
Length = 190
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 18/188 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVLLA 76
+ VGLGNPG Y+ TRHN GF ++D A G C+ G G VLL
Sbjct: 7 MIVGLGNPGRTYEDTRHNAGFMVLDRLAARWGAVFKADRQRKCEVAAGPG------VLLV 60
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP T+MN SG GP+ ++KL V V HD++ P GV++LR G GGHNG+KS++
Sbjct: 61 KPSTFMNESGLCVGPMMRFFKLDPRSVFVIHDEVDFPLGVIKLREKGSAGGHNGIKSLIA 120
Query: 137 NFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ GIG+P G+ + +L KF RE +D L + + + + G+T
Sbjct: 121 HMGTQEFPRLRFGIGQPRGKGEMIGHVLGKFRPEERELLDVTLGKAEDAVLYTMEHGITR 180
Query: 188 SARHFNTI 195
+ FN +
Sbjct: 181 AGNIFNAV 188
>gi|443492562|ref|YP_007370709.1| peptidyl-tRNA hydrolase Pth [Mycobacterium liflandii 128FXT]
gi|442585059|gb|AGC64202.1| peptidyl-tRNA hydrolase Pth [Mycobacterium liflandii 128FXT]
Length = 191
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 104/182 (57%), Gaps = 12/182 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG+ Y TRHN+GF + D A G VH + A G +
Sbjct: 1 MAEPLLVVGLGNPGENYARTRHNLGFMVADLLAARLGAKFK-VHKRSGAEVVTGRLAQRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 132
V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G +RL+ GG GGHNGL+
Sbjct: 60 VVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGLR 119
Query: 133 SV-----MNNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 183
SV +F+ G GRPPG+ DP F+L+ F++ R + T ++ + +LL+
Sbjct: 120 SVAAALGTKDFQRVRIGTGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVEM 179
Query: 184 GL 185
GL
Sbjct: 180 GL 181
>gi|385801785|ref|YP_005838188.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis HMP9231]
gi|333393544|gb|AEF31462.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis HMP9231]
Length = 199
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 23/195 (11%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVL 74
WL VGLGNPG KY+GTRHN+GF + D +E IS + + G+G + A
Sbjct: 6 WLIVGLGNPGSKYEGTRHNMGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKFF 65
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
LAKP T+MN SG + +++YY++ + +++ HDDM L G ++++ G GGHNG++S+
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIETDHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRSI 125
Query: 135 MNNFRGIGRPP----------GQMDPKA------FLLQKFNAIARERIDTALQEGVEVLK 178
R +G P Q A ++L F + + L +G + ++
Sbjct: 126 D---RSLGTPQYARVRMGVGHAQRGAHAHDNTVNWVLGGFAGAQKSELPNFLADGADAVE 182
Query: 179 LLLSKGLTESARHFN 193
++ +GL+ + HFN
Sbjct: 183 SVIFRGLSTTQEHFN 197
>gi|431792122|ref|YP_007219027.1| peptidyl-tRNA hydrolase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782348|gb|AGA67631.1| peptidyl-tRNA hydrolase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 185
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHN GF ++D AE + + + + +G + L KPQ
Sbjct: 3 LIVGLGNPGVQYAETRHNAGFLLLDCLAEELNLDFRS-KFQGLVSETQIGGEKIYLLKPQ 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG S + +YK+ +LV +DDM L G LRLR +G GGHNG+KS +
Sbjct: 62 TFMNLSGRSIREVVQFYKIAPQDILVIYDDMDLAVGRLRLRSSGSAGGHNGIKSTIAELG 121
Query: 139 --------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
GIGRPP D ++L F +E + VL+ +L KG+
Sbjct: 122 SEDFWRLKVGIGRPPTGWDSARYVLASFA-----------KEEIPVLEEVLDKGM 165
>gi|296118211|ref|ZP_06836792.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
gi|295968769|gb|EFG82013.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
Length = 220
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 2 LINRFL-----RRGFCTAVARP----------WLFVGLGNPGDKYKGTRHNVGFEMIDAF 46
++NRF R G CT AR WL VGLGNPG KY TRHNVG+ ID
Sbjct: 3 VLNRFFDLFRSRSGSCTQSARDTSVELPATADWLVVGLGNPGAKYAATRHNVGYMAIDDL 62
Query: 47 AESQGISMNTVHCKATFGQGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLV 105
G + VH + V+LA+P T+MNLSGE+ GP+A + +R++
Sbjct: 63 LAETGDLVQPVHGHKLLAATVEIAGHTVVLARPTTFMNLSGEAIGPVAEKLGISADRIIA 122
Query: 106 FHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQ 156
HD++ LP +RL+ G GHNGLKS+ + GI RPP ++L
Sbjct: 123 VHDELDLPENKIRLKLGGNENGHNGLKSLTQHLGTRDYLRVRIGIARPPKGSSIPDYVLA 182
Query: 157 KFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 197
N A D ++ +K ++S GL ++ NTI
Sbjct: 183 PVN--AGPGFDQSIALAASGVKEIISSGLNKAQ---NTIHS 218
>gi|269796294|ref|YP_003315749.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
gi|269098479|gb|ACZ22915.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
Length = 202
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 16/192 (8%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP------ 72
WL VGLGNPG +Y G RHNVG ++D A G S + +A + +G P
Sbjct: 9 WLVVGLGNPGPQYAGNRHNVGQMVLDELASRHGGSFSAHRSRAAVAEVRLGVLPGGVPGP 68
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
V+LAKP TYMN SG LA Y+++ + VLV HD++ +P G +R + GG GGHNGL
Sbjct: 69 RVVLAKPSTYMNTSGGPVAGLAQYFQVEPDHVLVVHDELDIPFGDVRCKIGGGEGGHNGL 128
Query: 132 KSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+ + GIGRPPG+MD F+L+ F + R+ + L + ++++++
Sbjct: 129 RDISKALGTKDYLRVRTGIGRPPGRMDTADFVLKDFGTVERKELPFLLDTSADAVEMVVT 188
Query: 183 KGLTESARHFNT 194
+GL ++ F+T
Sbjct: 189 EGLEKAQMAFHT 200
>gi|254415168|ref|ZP_05028930.1| peptidyl-tRNA hydrolase [Coleofasciculus chthonoplastes PCC 7420]
gi|196177974|gb|EDX72976.1| peptidyl-tRNA hydrolase [Coleofasciculus chthonoplastes PCC 7420]
Length = 201
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 13/189 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT---VHCKATFGQGFVGDAPVL 74
P L VGLGNP KY TRHN+GFE++D A IS + G+G GD +
Sbjct: 9 PQLIVGLGNPEPKYDKTRHNIGFEVVDELARRVQISWSENRRFQALLAEGRGLTGDKLRV 68
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KP TYMN SG++ +YK+P VL+ +D++ LP G LR+R +G GGHNG+KS
Sbjct: 69 L-KPLTYMNRSGQAIRAAIDWYKMPPESVLIVYDELDLPVGRLRIRLSGSAGGHNGMKSA 127
Query: 135 MNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ + GIG+ + + +L KF+ + I +Q V+ ++L L +G+
Sbjct: 128 IAHLGTQGFPRLRIGIGKSDPEKNTVGHVLGKFSPDESKIITEVIQLAVDAIELSLKEGV 187
Query: 186 TESARHFNT 194
++ +N+
Sbjct: 188 EKAMSLYNS 196
>gi|50842020|ref|YP_055247.1| peptidyl-tRNA hydrolase [Propionibacterium acnes KPA171202]
gi|289424236|ref|ZP_06426019.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK187]
gi|289428385|ref|ZP_06430071.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J165]
gi|295130102|ref|YP_003580765.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK137]
gi|335052024|ref|ZP_08544924.1| aminoacyl-tRNA hydrolase [Propionibacterium sp. 409-HC1]
gi|335054805|ref|ZP_08547606.1| aminoacyl-tRNA hydrolase [Propionibacterium sp. 434-HC2]
gi|342213461|ref|ZP_08706186.1| aminoacyl-tRNA hydrolase [Propionibacterium sp. CC003-HC2]
gi|354606503|ref|ZP_09024474.1| peptidyl-tRNA hydrolase [Propionibacterium sp. 5_U_42AFAA]
gi|365962247|ref|YP_004943813.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365964491|ref|YP_004946056.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365973427|ref|YP_004954986.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes TypeIA2 P.acn33]
gi|386023487|ref|YP_005941790.1| peptidyl-tRNA hydrolase [Propionibacterium acnes 266]
gi|387502910|ref|YP_005944139.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes 6609]
gi|407934912|ref|YP_006850554.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes C1]
gi|417931134|ref|ZP_12574507.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK182]
gi|422427315|ref|ZP_16504233.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA1]
gi|422428853|ref|ZP_16505758.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA2]
gi|422431788|ref|ZP_16508658.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA2]
gi|422435204|ref|ZP_16512062.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL083PA2]
gi|422436551|ref|ZP_16513398.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL092PA1]
gi|422442914|ref|ZP_16519717.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA1]
gi|422446714|ref|ZP_16523459.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA1]
gi|422449935|ref|ZP_16526652.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA2]
gi|422453347|ref|ZP_16530043.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA3]
gi|422456346|ref|ZP_16533010.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA1]
gi|422479770|ref|ZP_16556180.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA1]
gi|422481462|ref|ZP_16557861.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA1]
gi|422487531|ref|ZP_16563862.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA2]
gi|422488982|ref|ZP_16565309.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL020PA1]
gi|422491843|ref|ZP_16568154.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL086PA1]
gi|422494074|ref|ZP_16570369.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA1]
gi|422498086|ref|ZP_16574359.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA3]
gi|422500526|ref|ZP_16576782.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA2]
gi|422504314|ref|ZP_16580551.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA2]
gi|422505014|ref|ZP_16581248.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA2]
gi|422509500|ref|ZP_16585658.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA2]
gi|422511637|ref|ZP_16587780.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA1]
gi|422514477|ref|ZP_16590598.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA2]
gi|422515699|ref|ZP_16591811.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA2]
gi|422523846|ref|ZP_16599858.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL053PA2]
gi|422531205|ref|ZP_16607153.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA1]
gi|422535418|ref|ZP_16611341.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA1]
gi|422535744|ref|ZP_16611652.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL078PA1]
gi|422538227|ref|ZP_16614101.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA1]
gi|422543559|ref|ZP_16619399.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA1]
gi|422546618|ref|ZP_16622445.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA3]
gi|422551047|ref|ZP_16626844.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA1]
gi|422553215|ref|ZP_16629002.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA3]
gi|422554541|ref|ZP_16630311.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA2]
gi|422557815|ref|ZP_16633558.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA2]
gi|422562620|ref|ZP_16638298.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA1]
gi|422567837|ref|ZP_16643463.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA2]
gi|422570405|ref|ZP_16646000.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL067PA1]
gi|422578361|ref|ZP_16653890.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA4]
gi|68052928|sp|Q6AAC7.1|PTH_PROAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|50839622|gb|AAT82289.1| peptidyl-tRNA hydrolase [Propionibacterium acnes KPA171202]
gi|289154933|gb|EFD03615.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK187]
gi|289158357|gb|EFD06574.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J165]
gi|291375619|gb|ADD99473.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK137]
gi|313765347|gb|EFS36711.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA1]
gi|313792870|gb|EFS40937.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA1]
gi|313802677|gb|EFS43899.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA2]
gi|313806690|gb|EFS45197.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA2]
gi|313814602|gb|EFS52316.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA1]
gi|313815246|gb|EFS52960.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA1]
gi|313817233|gb|EFS54947.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA2]
gi|313821705|gb|EFS59419.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA1]
gi|313824404|gb|EFS62118.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA2]
gi|313826761|gb|EFS64475.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA1]
gi|313828551|gb|EFS66265.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA2]
gi|313840313|gb|EFS78027.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL086PA1]
gi|314916010|gb|EFS79841.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA4]
gi|314916915|gb|EFS80746.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA1]
gi|314921556|gb|EFS85387.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA3]
gi|314931120|gb|EFS94951.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL067PA1]
gi|314954823|gb|EFS99229.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA1]
gi|314958989|gb|EFT03091.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA1]
gi|314961284|gb|EFT05385.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA2]
gi|314964288|gb|EFT08388.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA1]
gi|314980490|gb|EFT24584.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA2]
gi|314987503|gb|EFT31594.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA2]
gi|314989031|gb|EFT33122.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA3]
gi|315078696|gb|EFT50727.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL053PA2]
gi|315081844|gb|EFT53820.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL078PA1]
gi|315082663|gb|EFT54639.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA2]
gi|315086372|gb|EFT58348.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA3]
gi|315087620|gb|EFT59596.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA1]
gi|315099744|gb|EFT71720.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA2]
gi|315101951|gb|EFT73927.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA1]
gi|315106542|gb|EFT78518.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA1]
gi|315110330|gb|EFT82306.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA2]
gi|327445368|gb|EGE92022.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA2]
gi|327454825|gb|EGF01480.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA3]
gi|327455682|gb|EGF02337.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL083PA2]
gi|327456829|gb|EGF03484.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL092PA1]
gi|328755881|gb|EGF69497.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA1]
gi|328756664|gb|EGF70280.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA2]
gi|328758615|gb|EGF72231.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL020PA1]
gi|332674943|gb|AEE71759.1| peptidyl-tRNA hydrolase [Propionibacterium acnes 266]
gi|333763678|gb|EGL41117.1| aminoacyl-tRNA hydrolase [Propionibacterium sp. 434-HC2]
gi|333765198|gb|EGL42564.1| aminoacyl-tRNA hydrolase [Propionibacterium sp. 409-HC1]
gi|335276955|gb|AEH28860.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes 6609]
gi|340769005|gb|EGR91530.1| aminoacyl-tRNA hydrolase [Propionibacterium sp. CC003-HC2]
gi|340769457|gb|EGR91981.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK182]
gi|353557910|gb|EHC27278.1| peptidyl-tRNA hydrolase [Propionibacterium sp. 5_U_42AFAA]
gi|365738928|gb|AEW83130.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365741172|gb|AEW80866.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes TypeIA2 P.acn17]
gi|365743426|gb|AEW78623.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes TypeIA2 P.acn33]
gi|407903493|gb|AFU40323.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes C1]
gi|456740118|gb|EMF64649.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes FZ1/2/0]
Length = 200
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-----------TVHCKATFGQGF 67
WL +GLGNPG +Y GTRHNVG ++I G ++ T A G
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 68 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
V V+L + +TYMN SG + +A++ + + ++V HD++ L G LRL+ GG G
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITPDHLIVVHDEIDLDPGRLRLKKGGGDNG 124
Query: 128 HNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
HNGLKS+ + R G+GRPPG DP ++L + A R + + + ++
Sbjct: 125 HNGLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAVE 184
Query: 179 LLLSKGLTESARHFNT 194
++ +GL + FN+
Sbjct: 185 SIIIQGLAAAQNRFNS 200
>gi|397904463|ref|ZP_10505374.1| Peptidyl-tRNA hydrolase [Caloramator australicus RC3]
gi|397162473|emb|CCJ32708.1| Peptidyl-tRNA hydrolase [Caloramator australicus RC3]
Length = 190
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 107/185 (57%), Gaps = 11/185 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG Y+ TRHNVGFE+I+ AE G S+N + K FG+G + VLL KP
Sbjct: 2 YLVVGLGNPGRDYEKTRHNVGFEVIERLAEKLGASVNKIKFKGLFGEGTFDNKKVLLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSGES +YK+ + ++V +DD+ + G LR+R +G GGHNG+K+++ +
Sbjct: 62 STFMNLSGESLIEAVEFYKINIENIIVVYDDVDIDVGRLRIRPSGSDGGHNGMKNIIYHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GIG+P + D + +L KF+ I+ + + + ++ G+ +
Sbjct: 122 QDNKFPRVRIGIGKP--KFDMISHVLGKFSKEEEVLIEKVIDAASDAVLEIIKNGIQSAM 179
Query: 190 RHFNT 194
+N+
Sbjct: 180 NKYNS 184
>gi|357051466|ref|ZP_09112655.1| peptidyl-tRNA hydrolase [Enterococcus saccharolyticus 30_1]
gi|355379762|gb|EHG26914.1| peptidyl-tRNA hydrolase [Enterococcus saccharolyticus 30_1]
Length = 186
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 21/169 (12%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG KY+ T+HNVGF ++DA AE + + +A + F+ ++L KPQ
Sbjct: 3 MIIGLGNPGKKYEKTKHNVGFMVVDALAEKYQATFKSSAFEAEIAEFFMNGEKIMLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG + GPL YY + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYYGVYPEEIVVIYDDLDLALGKIRLRQKGSAGGHNGMKSLISHLG 122
Query: 139 --------RGIGRP------------PGQMDPKAFLLQKFNAIARERID 167
GI RP P + + +LQ + A ID
Sbjct: 123 TSVFDRIKVGIDRPQSGRTVVDHVLSPFAKEDQPMILQSLDKAAAASID 171
>gi|162455218|ref|YP_001617585.1| hypothetical protein sce6936 [Sorangium cellulosum So ce56]
gi|189038167|sp|A9GXK1.1|PTH_SORC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161165800|emb|CAN97105.1| pth [Sorangium cellulosum So ce56]
Length = 223
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 21/195 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIS-----MNTVHCKATFGQGFVGDAPV 73
L VGLGNPG +Y RHNVGF IDA A+ + VH +A G +
Sbjct: 2 LLVVGLGNPGKEYAAHRHNVGFMAIDALADEVRADPFREKFSGVHARAEI----AGQQAI 57
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 133
LL KP TYMN SG S P A++K+ + ++V HD++ LP G +RL+ GGH GHNGL+S
Sbjct: 58 LL-KPMTYMNESGRSVQPAMAFFKVAPSELIVLHDELDLPFGTVRLKVGGGHAGHNGLRS 116
Query: 134 VMN-----NF----RGIGRPPG--QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
+++ NF G+GRPP + + ++L F+A+ R + L++ V+ + + +
Sbjct: 117 IISHGGTGNFGRVRLGVGRPPAGFRGEVADYVLSGFDAVERASLPDCLKQAVQSVLEVAA 176
Query: 183 KGLTESARHFNTIQK 197
+G + NT K
Sbjct: 177 RGFEAAMNVRNTRPK 191
>gi|422447399|ref|ZP_16524131.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA3]
gi|314926810|gb|EFS90641.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA3]
Length = 200
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-----------TVHCKATFGQGF 67
WL +GLGNPG +Y GTRHNVG ++I G ++ T A G
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 68 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
V V+L + +TYMN SG + +A++ + + ++V HD++ L G LRL+ GG G
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITPDHLIVVHDEIDLDPGRLRLKKGGGDNG 124
Query: 128 HNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
HNGLKS+ + R G+GRPPG DP ++L + A R + + + ++
Sbjct: 125 HNGLKSIRAHIRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAVE 184
Query: 179 LLLSKGLTESARHFNT 194
++ +GL + FN+
Sbjct: 185 SIIIQGLAAAQNRFNS 200
>gi|312128224|ref|YP_003993098.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
gi|311778243|gb|ADQ07729.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
Length = 189
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG+KY TRHN GF ID A+ ++ + K G VLL KP
Sbjct: 3 YIIAGLGNPGEKYTFTRHNAGFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SGES +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 63 MTYMNASGESIIEAVNFYKIKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQRL 122
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P + D ++L +F +E+I A+++ +K+LL + +
Sbjct: 123 GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDMDRAM 180
Query: 190 RHFN 193
+ N
Sbjct: 181 NYIN 184
>gi|227832713|ref|YP_002834420.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|262182798|ref|ZP_06042219.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453729|gb|ACP32482.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 226
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 12/189 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 77
WL VGLGNPG KY TRHNVG+ +D G + V + + Q +G V+ +
Sbjct: 40 WLIVGLGNPGAKYAATRHNVGYMAVDDLLAKSGDMLEPVTGHQLSAAQLELGGTKVVALR 99
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
TYMNLSG+ PLAA + ++V HD++ LP G +R++ G GHNGLKS+
Sbjct: 100 SHTYMNLSGDPIAPLAAQLGVAAENIIVIHDELDLPAGKVRIKKGGNENGHNGLKSLSER 159
Query: 138 FR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPP ++L +A A +D+ + E +L++++GL ++
Sbjct: 160 LGTRDYLRVRIGIGRPPKGGSIPDWVLAPVDASA--ELDSTIATAAEAARLIVAEGLNKA 217
Query: 189 ARHFNTIQK 197
+ ++ K
Sbjct: 218 QQEIHSRSK 226
>gi|404367382|ref|ZP_10972749.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
gi|313690316|gb|EFS27151.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
Length = 186
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 11/161 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPGDKY TRHN+GFE+I+ + I + + + VL KPQ
Sbjct: 3 LIVGLGNPGDKYAKTRHNIGFEVINKLQKDLNIIGEKDKFQGLLSEKNIDGEKVLFLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MNLSG S + +YK+ N ++V +DDM LP G LR++ G GGHNG+KS++++
Sbjct: 63 TFMNLSGNSIAAVINFYKIDAKNDMIVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIISHL 122
Query: 139 R--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
GIG+ D F+L +F+ +E +D ++
Sbjct: 123 GDEFLRIKCGIGKSKD--DTIDFVLGQFDKSEQETVDKMIE 161
>gi|365852726|ref|ZP_09393083.1| aminoacyl-tRNA hydrolase [Lactobacillus parafarraginis F0439]
gi|363714302|gb|EHL97835.1| aminoacyl-tRNA hydrolase [Lactobacillus parafarraginis F0439]
Length = 186
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN G +Y GTRHN GF +++AFA+ GI++ T A G F+ VL+ +P
Sbjct: 3 MIVGLGNIGPQYDGTRHNTGFMVVEAFAKKHGINIKTRKMNAKLGSDFLNGTKVLVVEPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
T+MN SG + PL Y+ + V+V HDDM LP G +R++ G GGHNG+KS++ N
Sbjct: 63 TFMNDSGIAVKPLMDYFDVKPEDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSIIANL 121
>gi|126463243|ref|YP_001044357.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17029]
gi|166229441|sp|A3PML9.1|PTH_RHOS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126104907|gb|ABN77585.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17029]
Length = 225
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y G RHN+G+ ++A A G + +G +G VLL KP+
Sbjct: 3 LFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S G +YKL V+VFHD++ L G LRL+ GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHAHVG 122
Query: 139 -------RGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQ---EGVEVL 177
GIG PG D A ++L F ++ + L+ +G E L
Sbjct: 123 EAYGRVRLGIGH-PGHKDAVAPYVLSDFAKADQDWLADLLRGIADGAEAL 171
>gi|257871349|ref|ZP_05651002.1| peptidyl-tRNA hydrolase [Enterococcus gallinarum EG2]
gi|257805513|gb|EEV34335.1| peptidyl-tRNA hydrolase [Enterococcus gallinarum EG2]
Length = 186
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 21/169 (12%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ +GLGNPG KY+ T+HNVGF ++DA AE + + +A + F+ ++L KPQ
Sbjct: 3 MIIGLGNPGKKYEKTKHNVGFMVVDALAEKYQATFKSSAFEAEIAEFFMNGEKIMLVKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MN SG + GPL YY + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 TFMNESGRAVGPLMTYYGVYPEEIVVIYDDLDLALGKIRLRQKGSAGGHNGMKSLISHLG 122
Query: 139 --------RGIGRP-PGQM-----------DPKAFLLQKFNAIARERID 167
GI RP PG+ + + +LQ + A ID
Sbjct: 123 TSVFDRIKVGIDRPQPGRTVVDHVLSPFAKEDQPMILQSLDKAAAASID 171
>gi|119715157|ref|YP_922122.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
gi|119535818|gb|ABL80435.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
Length = 217
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 15/198 (7%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHC-KATFGQGFVG- 69
+ A WL VGLGNPG Y G RHNVG+ + D A G +A +G +G
Sbjct: 20 ADSAAPVWLVVGLGNPGPTYAGHRHNVGYLVADELASRLGAPFRAHKSGRAEVVEGRLGV 79
Query: 70 ----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 125
V+L + + YMN +G LA +YK+P R++ HD++ + +R++ GG
Sbjct: 80 PGQPGPRVVLMRARCYMNETGGPVKQLAGFYKVPPERIIAVHDELDIAFDTMRVKLGGGD 139
Query: 126 GGHNGLKSVMNN------FR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 176
GHNGL+S+ ++ +R GIGRPPG+ DP F+L +++ R+ + + +
Sbjct: 140 NGHNGLRSMRSSLGTGDFYRVRVGIGRPPGRQDPADFVLSNYSSSERKVLPFQVDRAADA 199
Query: 177 LKLLLSKGLTESARHFNT 194
++ L+++GL + + FN+
Sbjct: 200 VEALVTEGLERTQQRFNS 217
>gi|421250514|ref|ZP_15706964.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 2082239]
gi|395612091|gb|EJG72137.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 2082239]
Length = 189
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLLA 76
L VGLGNPGDKY T+HNVGF +ID A+ Q ++ H K A F+ + L
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTF--THDKIFQADLASFFLNGEKIYLV 61
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP T+MN SG++ L YY L ++ +L+ +DD+ + G +RLR G GGHNG+KS++
Sbjct: 62 KPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFN 159
+ GIGRP M ++L KF+
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVHYVLSKFD 153
>gi|124268411|ref|YP_001022415.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
gi|166199361|sp|A2SKU1.1|PTH_METPP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|124261186|gb|ABM96180.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
Length = 232
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 18/189 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA-----PVL 74
L VGLGNPG +Y+ TRHN GF +DA A S+ H + + G V PV
Sbjct: 4 LMVGLGNPGPEYEATRHNAGFWWVDAVARQLKASL---HAERAY-HGLVARVNTPVGPVW 59
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L +PQTYMN+SG+S LA ++K+ +LV HD++ LP G ++L+ GGH GHNGL+ +
Sbjct: 60 LLEPQTYMNVSGKSVAALARFFKIAPEEILVAHDELDLPPGEMKLKQGGGHAGHNGLRDI 119
Query: 135 ------MNNFR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ +R GIG P + + ++L K RE ID + + + LLS +
Sbjct: 120 HAQLGSTDYWRLRLGIGHPGVKAEVANYVLGKPMREHREAIDACIVRSLTAVDALLSGDM 179
Query: 186 TESARHFNT 194
+++ +T
Sbjct: 180 SKATLRLHT 188
>gi|385825228|ref|YP_005861570.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii DPC 6026]
gi|329666672|gb|AEB92620.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii DPC 6026]
Length = 185
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 8/166 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L GLGNPG KY T+HN GF +D + E G++++ + + + V+ +PQ
Sbjct: 3 LIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKNKFDGLWTKQNINGEDVIFLEPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
T+MN SG+S +A ++K+ +LV HDDM +P G +R+R NG GGHNG+KS+M
Sbjct: 63 TFMNDSGKSIAQVANFFKIKPEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMACLG 122
Query: 136 -NNFR--GIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 177
NNF IG R P +++L FN ++ +D A + V+
Sbjct: 123 TNNFNRLKIGIRHPENESVVSWVLSPFNNDQQKLMDAAFETSENVI 168
>gi|77464401|ref|YP_353905.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides 2.4.1]
gi|119390995|sp|Q3IZN0.1|PTH_RHOS4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77388819|gb|ABA80004.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides 2.4.1]
Length = 225
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG +Y G RHN+G+ ++A A G + +G +G VLL KP+
Sbjct: 3 LFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S G +YKL V+VFHD++ L G LRL+ GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVGEAMRFYKLTPADVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHAHVG 122
Query: 139 -------RGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQ---EGVEVL 177
GIG PG D A ++L F ++ + L+ +G E L
Sbjct: 123 EAYGRVRLGIGH-PGHKDAVAPYVLSDFAKADQDWLADLLRGISDGAEAL 171
>gi|417932535|ref|ZP_12575873.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK182B-JCVI]
gi|340774171|gb|EGR96658.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK182B-JCVI]
Length = 200
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 20/196 (10%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFA-----------ESQGISMNTVHCKATFGQGF 67
WL +GLGNPG +Y GTRHNVG +++ Q + T A G
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVVTELCLRAGEKLSPARRQQAELVRTRVSSAGLGVPA 64
Query: 68 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 127
V L + +TYMN SG + +A+ + + ++V HD++ L G LRL+ GG G
Sbjct: 65 ADAQAVTLMRSRTYMNESGIAVRKVASVAGITPDHLIVVHDEIDLDPGRLRLKKGGGDNG 124
Query: 128 HNGLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
HNGLKS+ + R G+GRPPG DP ++L + A R +D + + ++
Sbjct: 125 HNGLKSIRAHMRTGDFIRVRVGVGRPPGHQDPADWVLARVPARQRADMDVQVALAADAVE 184
Query: 179 LLLSKGLTESARHFNT 194
++++GLT + FN+
Sbjct: 185 TIINQGLTAAQNRFNS 200
>gi|342218861|ref|ZP_08711464.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 135-E]
gi|341588808|gb|EGS32183.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 135-E]
Length = 197
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGNPG +Y+ T+HN GF +IDA A + +A G VLL KPQ
Sbjct: 1 MIVGLGNPGKEYEQTKHNAGFMVIDALAARMDNTRWKCEMEALVATTTYGGEKVLLVKPQ 60
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + L +YK+ + + V +DDM LP G LR+R NG GGHNG+KS++
Sbjct: 61 TYMNDSGRAVRALLHWYKIEADHIYVVYDDMDLPIGRLRIRKNGSAGGHNGIKSILEQGC 120
Query: 138 -----FR-GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
FR GIGRP +L F + + + + L G+ +
Sbjct: 121 HDFIRFRLGIGRPLPHWTVVNHVLSPFPSATYTVFKDGVSYAADAVLGCLELGIDKGMNR 180
Query: 192 FNTIQKYK 199
FN +K K
Sbjct: 181 FNIKKKAK 188
>gi|325286676|ref|YP_004262466.1| peptidyl-tRNA hydrolase [Cellulophaga lytica DSM 7489]
gi|324322130|gb|ADY29595.1| Peptidyl-tRNA hydrolase [Cellulophaga lytica DSM 7489]
Length = 229
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
+ +L VGLGN G +Y TRHN+GF+++DAFA+ + ++ A G +L
Sbjct: 43 KKFLVVGLGNIGTEYTETRHNIGFKILDAFAKKESLTFEPQKLGAVTTYKIKGRT-ILFL 101
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
+P TYMNLSG++ K+PL +LV DD+ LP G +R++ G GGHNGLK N
Sbjct: 102 QPSTYMNLSGKAIRYWLEKEKIPLENLLVITDDINLPFGTIRVKTKGSDGGHNGLKDTQN 161
Query: 137 NFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 187
+ G+G G+ ++L ++N +E++ L+ +E++K + G+
Sbjct: 162 ILQTTSYNRYRFGVGADFGKGRQVDYVLGEWNQEEQEKMPERLERSIELIKSFVLAGIKT 221
Query: 188 SARHFN 193
+ HFN
Sbjct: 222 TMNHFN 227
>gi|406979973|gb|EKE01655.1| hypothetical protein ACD_21C00082G0005 [uncultured bacterium]
Length = 200
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 10/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAES-QGISMNTVHCKATFGQGFVGDAPVLLAKP 78
L VGLGNPG +Y+ TRHNVGF +++A E QG + K FG + + L P
Sbjct: 9 LVVGLGNPGSQYEKTRHNVGFWLVNALVEKYQGNIKHEAKFKGLFGAVNISEHECKLLVP 68
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
T+MNLSGE+ +A++YK+P +LV HD++ P G +RL+ GG HNG+++++
Sbjct: 69 LTFMNLSGEAVRKVASFYKIPPESILVIHDELDFPPGDVRLKKGGGANSHNGVQNIIDQL 128
Query: 136 --NNF----RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
NNF GIG+P + D ++ N ++I A+ +EV+ L+S ++
Sbjct: 129 GSNNFLRMRLGIGKPSFKADMINYVTSSPNKSETKQIHEAIDRAIEVIPDLISGDFAKAV 188
Query: 190 RHFNT 194
+ ++
Sbjct: 189 QTLHS 193
>gi|293189924|ref|ZP_06608604.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
gi|292821143|gb|EFF80090.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
Length = 200
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 16/193 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVGD 70
PWL VGLGNPG +Y TRHNVG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYAFTRHNVGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVPG 65
Query: 71 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 130
V+LA+ +YMN SG LA ++K+ +R+LV HDDM LP LRL+ GG GGHNG
Sbjct: 66 PRVILARSDSYMNTSGGPISALATFHKIDPSRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 131 LKSVMNNF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 181
LKS+ + G+GRPPG+MDP ++L + R D ++ +V++ ++
Sbjct: 126 LKSLSQHLGTRDYARLRIGVGRPPGRMDPADYVLATLPSKERPEWDVTFEQAADVVEDIV 185
Query: 182 SKGLTESARHFNT 194
+KG + +T
Sbjct: 186 TKGFAPTQMALHT 198
>gi|312623039|ref|YP_004024652.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203506|gb|ADQ46833.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
Length = 189
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG+KY TRHN GF ID A+ ++ + K G VLL KP
Sbjct: 3 YIIAGLGNPGEKYIFTRHNAGFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMN SGES +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 63 MTYMNASGESIIEAVNFYKIKTEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQCL 122
Query: 139 ---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
GIG P + D ++L +F +E+I A+++ +K+LL + +
Sbjct: 123 GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRAM 180
Query: 190 RHFN 193
+ N
Sbjct: 181 NYIN 184
>gi|226365172|ref|YP_002782955.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
gi|254783884|sp|C1AY15.1|PTH_RHOOB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226243662|dbj|BAH54010.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
Length = 190
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 107/177 (60%), Gaps = 12/177 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG +Y+ TRHNVGF + + G + H K A QG + P +LAK
Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKF-SAHKKSGAEIVQGRLEGRPTILAK 65
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+++MNLSG + LA ++ + ++V HD++ L G +RL+ GG GGHNGL+S+ +
Sbjct: 66 PRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQS 125
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
GIGRPPG+MDP +++L+ F+++ R+ +D +E + ++L+L GL
Sbjct: 126 LGTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRLGL 182
>gi|403732120|ref|ZP_10949630.1| peptidyl-tRNA hydrolase [Gordonia rhizosphera NBRC 16068]
gi|403201948|dbj|GAB93961.1| peptidyl-tRNA hydrolase [Gordonia rhizosphera NBRC 16068]
Length = 188
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 15/190 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG KY+ TRHN+G + D +S G VH + A + VL+AK
Sbjct: 3 LIVGLGNPGPKYEKTRHNIGAMVADGLVDSAGERWK-VHKRSGAEVAPLTLAGQQVLVAK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 137
P+TYMN SG GPLA +Y + + ++V HD++ + G++RL+ GG GGHNGL+S+ +
Sbjct: 62 PRTYMNESGRQIGPLAKFYSVKPDDLIVLHDELDIDFGLVRLKRGGGEGGHNGLRSISQS 121
Query: 138 F---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
GIGRPPG+ DP F+L+ F AR +D + G + +LL++ GL +
Sbjct: 122 LGTRDYLRVRLGIGRPPGRQDPADFVLKPFPTSARADVDLLITHGCDAAELLVAHGLEPA 181
Query: 189 ARHFNTIQKY 198
NT+ +
Sbjct: 182 Q---NTVHAW 188
>gi|239637488|ref|ZP_04678462.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
gi|239596933|gb|EEQ79456.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
Length = 190
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 101/187 (54%), Gaps = 14/187 (7%)
Query: 21 FVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 80
VGLGN G +++ TRHN+GFE+ID E +++ K + + VLL +P T
Sbjct: 4 IVGLGNIGKRFELTRHNIGFEVIDYILERHRFTLDKQKFKGAYTIERMNGDKVLLIEPMT 63
Query: 81 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM----- 135
MNLSGE+ PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++
Sbjct: 64 MMNLSGEAVAPLMDYYNVDVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKMLGT 123
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARH 191
+ F+ G+GRP M ++LQ+F+ ++ ++ + + E++R
Sbjct: 124 DQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMITMEKVIEHSANAV-----ESFIETSRF 178
Query: 192 FNTIQKY 198
N + +Y
Sbjct: 179 DNVMNEY 185
>gi|425464172|ref|ZP_18843494.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9809]
gi|389833870|emb|CCI21240.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9809]
Length = 208
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 18/190 (9%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP--- 72
P L +GLGNP KY TRHN+GFE +D+ A G+S F QGF+ GD+P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLPG 67
Query: 73 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG+
Sbjct: 68 KIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNGI 127
Query: 132 KSVM-----NNFRGIGRPPGQMDPKAFL---LQKFNAIARERIDTALQEGVEVLKLLLSK 183
KS++ NF + G+ KA + L +F + I L + ++L L +
Sbjct: 128 KSMIAHVGTENFARLRIGIGKSTEKATISHVLGRFTPQENQVILKVLDLSRKAIELGLKQ 187
Query: 184 GLTESARHFN 193
GL ++ +N
Sbjct: 188 GLQKAMSLYN 197
>gi|452991354|emb|CCQ97342.1| Peptidyl-tRNA hydrolase [Clostridium ultunense Esp]
Length = 189
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 9/184 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ VGLGNPG Y TRHNVGF+ I+ A I +N + K+ +G+G +G V L KP
Sbjct: 2 FVVVGLGNPGKNYFNTRHNVGFDTINLLANRNNIIINKIKFKSVYGEGTIGGEKVFLVKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
QTYMN SG + L +YKLPL ++V DD+ + G +R+R G G HNGLKS++ +
Sbjct: 62 QTYMNNSGMAVLDLYNFYKLPLENIIVVVDDIDIEFGTIRIRKKGSAGSHNGLKSIIYHL 121
Query: 139 R---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 189
+ GIG D F+L +F+ R ID A+++ + ++ +++ + +
Sbjct: 122 QSEDFPRIKIGIGNKREGQDLADFVLSRFDKDERMDIDVAIEKAAQAVETIITYDMNTAM 181
Query: 190 RHFN 193
FN
Sbjct: 182 NQFN 185
>gi|294678567|ref|YP_003579182.1| aminoacyl-tRNA hydrolase [Rhodobacter capsulatus SB 1003]
gi|294477387|gb|ADE86775.1| aminoacyl-tRNA hydrolase [Rhodobacter capsulatus SB 1003]
Length = 229
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L+VGLGNPG KY RHN+GF +D A G + + +G G V+L KP+
Sbjct: 3 LWVGLGNPGTKYAANRHNIGFMAVDRIAADHGFAPWKKAFQGHVSEGRFGSTRVILLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
T+MNLSG+S A +YK+P+ + VFHD++ L G LRL+ GGH GHNGL+S+ +
Sbjct: 63 TFMNLSGQSVRAAADFYKIPVEAITVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHQHMG 122
Query: 139 -------RGIGRPPGQMDPKAFLLQKF 158
GIG P + ++L F
Sbjct: 123 EAYARVRLGIGHPGDKDRVAGYVLSDF 149
>gi|90962333|ref|YP_536249.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
gi|119390953|sp|Q1WSG3.1|PTH_LACS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|90821527|gb|ABE00166.1| Peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
Length = 185
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ VGLGN KY+GTRHNVGF +++ F E G + N + + F+ +++ KP
Sbjct: 3 MIVGLGNIEKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKPT 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN-- 137
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 63 TYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHVG 122
Query: 138 ---FR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 190
F+ GI P +M ++L +F ++D L V L + E+
Sbjct: 123 TEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----ENDD 176
Query: 191 HFNTIQKY 198
NT+ ++
Sbjct: 177 FMNTMNRF 184
>gi|83951129|ref|ZP_00959862.1| peptidyl-tRNA hydrolase [Roseovarius nubinhibens ISM]
gi|83839028|gb|EAP78324.1| peptidyl-tRNA hydrolase [Roseovarius nubinhibens ISM]
Length = 231
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 8/165 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 74
+ R +F GLGNPG KY G RHN+GF +D AE G + +G +G +L
Sbjct: 1 MTRMLIFAGLGNPGAKYAGNRHNIGFMALDRIAEDHGFGPWKSRFQGQASEGRLGSEKLL 60
Query: 75 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 134
L KP+T+MNLSG+S G +YKL V+VFHD++ L G +R++ GGH GHNGL+S+
Sbjct: 61 LLKPETFMNLSGQSVGEAMRFYKLTPADVIVFHDELDLAPGKIRVKQGGGHAGHNGLRSI 120
Query: 135 MNNF--------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 171
+ GIG P + ++L F ++ +D ++
Sbjct: 121 HQHIGPDYARVRLGIGHPGRKELVAQYVLHDFARADQDWLDDLMR 165
>gi|298244966|ref|ZP_06968772.1| peptidyl-tRNA hydrolase [Ktedonobacter racemifer DSM 44963]
gi|297552447|gb|EFH86312.1| peptidyl-tRNA hydrolase [Ktedonobacter racemifer DSM 44963]
Length = 227
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 17/188 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHNVGF +IDA AE G+ +A + V+L KP
Sbjct: 3 LLVGLGNPGAQYERTRHNVGFRVIDALAEKLGVRWER-RGRAMIANATLEHEKVVLVKPI 61
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 139
T+MN SGE+ G L ++KL +LV +D++ LP G LR+R G GGHNG+KS++
Sbjct: 62 TFMNNSGEAVGELQRWFKLEPEDILVVYDELDLPVGQLRVRARGSAGGHNGMKSLIQYLH 121
Query: 140 ---------GIGRPPG-QMDPKAFLLQKFNAIARERIDTALQ---EGVEVLKLLLSKGLT 186
GIGRP ++D ++L ++ T LQ + +E L+L +GL
Sbjct: 122 TDQFPRLRVGIGRPANRRLDTINYVL---GIPPKDEYITLLQTEDKALEAFSLILREGLD 178
Query: 187 ESARHFNT 194
++ N
Sbjct: 179 QAMNTLNV 186
>gi|291545189|emb|CBL18298.1| peptidyl-tRNA hydrolase [Ruminococcus champanellensis 18P13]
Length = 206
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
+L VGLGNPG +Y TRHN GF +D AE + + + K+ G + LL KP
Sbjct: 21 YLIVGLGNPGLEYAQTRHNAGFMTLDLLAEREHTEIKRMKFKSLCGDAVIAGKRCLLMKP 80
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM--- 135
TYMN SG++ +YKLP++ ++V +DD+ L LR+R G GGHNG+KS++
Sbjct: 81 TTYMNNSGQAVAEAMQFYKLPIDHIIVVYDDISLEPSRLRIRRKGSDGGHNGIKSIIYLT 140
Query: 136 --NNF----RGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 188
+ F G+G+ P + ++L +F E++ A + E + L+++ + E+
Sbjct: 141 GEDTFPRIKLGVGKKPRPDYNLADWVLSRFTKEELEQMHIAAEHACESIALMVNGKIDEA 200
Query: 189 ARHFNT 194
+N
Sbjct: 201 MNRYNA 206
>gi|260431161|ref|ZP_05785132.1| peptidyl-tRNA hydrolase [Silicibacter lacuscaerulensis ITI-1157]
gi|260414989|gb|EEX08248.1| peptidyl-tRNA hydrolase [Silicibacter lacuscaerulensis ITI-1157]
Length = 226
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY RHN+GF +DA A++ G + +G +G VLL KP
Sbjct: 3 LFVGLGNPGAKYARNRHNIGFMAVDAIADAHGFGPWRSKFQGEVSEGRLGREKVLLLKPM 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF- 138
TYMN SG+S G +YKL V VFHD++ L G +R + GGH GHNGL+S+ ++
Sbjct: 63 TYMNRSGQSVGEAMRFYKLDSTDVTVFHDELDLAPGKVRAKSGGGHAGHNGLRSIHDHIG 122
Query: 139 -------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 186
GIG P + A++L F + ++ L+ GV + L++G T
Sbjct: 123 AAYDRVRLGIGHPGRKELVSAYVLGDFAKADSQWLEDVLR-GVSDGAVHLAEGDT 176
>gi|220904722|ref|YP_002480034.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254783864|sp|B8J0S9.1|PTH_DESDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219869021|gb|ACL49356.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 229
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 18/188 (9%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH--------CKATFGQGFVGDA 71
+ VGLGNPG +Y+GTRHN GF +IDAF + G TV C+ + D
Sbjct: 6 VLVGLGNPGARYEGTRHNCGFALIDAFVDF-GYRHGTVDEMNGGKFSCQLWRVRLPRLDG 64
Query: 72 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 131
L AKPQT+MNLSG+ PL +++KL ++V HD++ +P G LR + GG+ GHNGL
Sbjct: 65 CWLAAKPQTFMNLSGQCVQPLLSWHKLKAADLVVAHDELDIPPGELRFKFGGGNAGHNGL 124
Query: 132 KSVM------NNFR---GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 182
KS+ + +R GIGRPP + D ++L + E +D L ++VL
Sbjct: 125 KSITELLGTPDFYRLRMGIGRPPHKGDVTNWVLGRPQGEDAENLDHILPLALDVLFAFAD 184
Query: 183 KGLTESAR 190
KGL + R
Sbjct: 185 KGLDSAVR 192
>gi|25027567|ref|NP_737621.1| peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|259507026|ref|ZP_05749926.1| aminoacyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|46576823|sp|Q8FQV6.1|PTH_COREF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|23492849|dbj|BAC17821.1| putative peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|259165304|gb|EEW49858.1| aminoacyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
Length = 177
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 14/171 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP-VLLA 76
P L VGLGNPG KY GTRHN+GFE+++ + + +VH ++ + P +++A
Sbjct: 5 PVLVVGLGNPGPKYVGTRHNIGFEVVEELV-GRNYANFSVHKRSNTE---IAQLPGLIVA 60
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 136
KP+++MNLSG L ++K+ VLV HD++ L G ++LR GG GHNGLKS
Sbjct: 61 KPRSFMNLSGTPIRALCDFFKISPANVLVVHDELDLDFGQVKLRQGGGDHGHNGLKSTSR 120
Query: 137 NF---------RGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
+ GIGRPPG+MDP F+L+ F+ ++ + + ++++
Sbjct: 121 SLGTKDYWKLSVGIGRPPGRMDPATFVLKPFSKQEQDSVPIMAADAADLIE 171
>gi|424851136|ref|ZP_18275533.1| peptidyl-tRNA hydrolase [Rhodococcus opacus PD630]
gi|356665801|gb|EHI45872.1| peptidyl-tRNA hydrolase [Rhodococcus opacus PD630]
Length = 190
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 107/177 (60%), Gaps = 12/177 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 77
L VGLGNPG +Y+ TRHNVGF + + G + H K A QG + P +LAK
Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKF-SAHKKSGAEIVQGRLEGRPTILAK 65
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV--- 134
P+++MNLSG + LA ++ + ++V HD++ L G +RL+ GG GGHNGL+S+
Sbjct: 66 PRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISSA 125
Query: 135 ------MNNFRGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 185
+ GIGRPPG+MDP +++L+ F+++ R+ +D +E + ++L+L GL
Sbjct: 126 LGTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRVGL 182
>gi|419841538|ref|ZP_14364906.1| aminoacyl-tRNA hydrolase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386904757|gb|EIJ69542.1| aminoacyl-tRNA hydrolase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 186
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY+ TRHNVGF ID F E IS + + + + KPQ
Sbjct: 3 LVVGLGNPGKKYEKTRHNVGFMAIDLFLEKYAISGEKEKFLSKVSETIMNGEKIYFLKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 138
TYMNLSG + + +YK+ PL+ +LV +DD LP G LR + G GGHNG+KS+++
Sbjct: 63 TYMNLSGNALHEIVQFYKINPLDEILVVYDDKDLPLGKLRYKLKGSSGGHNGIKSIISQI 122
Query: 139 R--------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 178
GIG G + F++ F E + + L+ VE +K
Sbjct: 123 GQEFCRIKCGIGSTKGNVID--FVIGDFQKSEEEELQSMLELAVEGIK 168
>gi|338737773|ref|YP_004674735.1| peptidyl-tRNA hydrolase [Hyphomicrobium sp. MC1]
gi|337758336|emb|CCB64161.1| Peptidyl-tRNA hydrolase [Hyphomicrobium sp. MC1]
Length = 262
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 9/173 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG+KY+ RHN+GF +D AE + + +G +G V L KP+
Sbjct: 19 LFVGLGNPGEKYRANRHNIGFMALDRIAERHSFAPWRKKFQGLISEGSIGGERVTLLKPE 78
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM---- 135
TYMN SG S G + K+PL+ + VFHD++ L G ++L+ GG+ GHNGL+S+
Sbjct: 79 TYMNESGRSVGEAQRFLKIPLSDIYVFHDELDLVPGKVKLKTGGGNAGHNGLRSITAHIE 138
Query: 136 NNFR----GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 184
N ++ GIG P + ++L F RE ++ AL + + L+KG
Sbjct: 139 NEYKRVRLGIGHPGSKDAVVYYVLNDFAKSEREWLN-ALLDAISDAAPYLAKG 190
>gi|329948077|ref|ZP_08294978.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328523216|gb|EGF50317.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 200
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 105/194 (54%), Gaps = 18/194 (9%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAP----- 72
WL VGLGNPG +Y RHNVG ++D AE G N +A +G +G P
Sbjct: 5 WLVVGLGNPGTRYARNRHNVGHMVLDVLAERTGSRFSNHKKARARVAEGRLGMMPGGAPG 64
Query: 73 --VLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 129
V+LA+P MNLSG L +YY + P +R+LV HD++ LP LRL+ GG GGHN
Sbjct: 65 PRVILAEPSVLMNLSGGPVSGLVSYYGIDPTSRLLVIHDELDLPAHELRLKRGGGEGGHN 124
Query: 130 GLKSVMNNFR---------GIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 180
GL+S+ + GIGRPPG+ DP F+L F R + L++ + ++ +
Sbjct: 125 GLRSISKSVSTKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAVEQV 184
Query: 181 LSKGLTESARHFNT 194
++ G ++ RH +
Sbjct: 185 VTLGFDDAQRHLHA 198
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.141 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,460,399,194
Number of Sequences: 23463169
Number of extensions: 147047848
Number of successful extensions: 274737
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3862
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 265794
Number of HSP's gapped (non-prelim): 4113
length of query: 208
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 72
effective length of database: 9,168,204,383
effective search space: 660110715576
effective search space used: 660110715576
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 73 (32.7 bits)