Query 028535
Match_columns 207
No_of_seqs 26 out of 28
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 21:47:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kat_A Uncharacterized protein 96.2 0.044 1.5E-06 37.4 9.0 95 90-203 15-109 (115)
2 3ma5_A Tetratricopeptide repea 94.5 0.18 6.1E-06 34.4 7.3 88 91-197 4-91 (100)
3 2xev_A YBGF; tetratricopeptide 94.0 0.87 3E-05 30.6 12.1 109 74-201 19-127 (129)
4 3upv_A Heat shock protein STI1 93.5 1.2 4E-05 30.4 11.4 92 90-200 34-125 (126)
5 2vgx_A Chaperone SYCD; alterna 91.1 1.8 6.3E-05 31.5 9.1 91 90-199 51-142 (148)
6 3sz7_A HSC70 cochaperone (SGT) 88.9 4.9 0.00017 28.7 14.3 92 90-200 41-132 (164)
7 3uq3_A Heat shock protein STI1 87.8 6.5 0.00022 28.8 10.5 29 94-122 139-167 (258)
8 3gyz_A Chaperone protein IPGC; 87.3 6.1 0.00021 29.7 9.7 86 89-196 65-150 (151)
9 2kck_A TPR repeat; tetratricop 86.9 3.1 0.0001 26.4 6.8 85 74-177 23-107 (112)
10 2xcb_A PCRH, regulatory protei 80.9 12 0.00041 26.2 12.6 92 89-199 47-139 (142)
11 4ga2_A E3 SUMO-protein ligase 80.4 11 0.00038 27.2 8.2 69 90-176 61-129 (150)
12 3qou_A Protein YBBN; thioredox 78.8 23 0.0008 28.3 10.5 101 89-196 146-268 (287)
13 3ro3_A PINS homolog, G-protein 78.5 12 0.00041 24.8 11.6 73 94-179 89-161 (164)
14 3qky_A Outer membrane assembly 77.0 22 0.00076 27.1 13.6 91 98-200 152-245 (261)
15 2dba_A Smooth muscle cell asso 76.9 14 0.00048 24.7 7.5 65 94-177 65-129 (148)
16 4ga2_A E3 SUMO-protein ligase 75.5 9.1 0.00031 27.6 6.5 84 74-176 11-94 (150)
17 1elr_A TPR2A-domain of HOP; HO 75.1 14 0.00048 23.8 13.4 107 74-198 21-127 (131)
18 1hxi_A PEX5, peroxisome target 74.6 19 0.00064 25.1 9.4 69 89-176 46-114 (121)
19 2ifu_A Gamma-SNAP; membrane fu 73.9 32 0.0011 27.5 13.0 86 94-193 155-240 (307)
20 2kc7_A BFR218_protein; tetratr 73.3 14 0.00048 23.7 6.5 34 90-123 30-64 (99)
21 3q49_B STIP1 homology and U bo 73.2 18 0.00061 24.2 12.5 90 89-197 38-130 (137)
22 2lni_A Stress-induced-phosphop 72.7 17 0.00058 23.7 9.2 68 91-177 47-114 (133)
23 4a1s_A PINS, partner of inscut 72.6 35 0.0012 27.3 10.2 53 94-152 126-178 (411)
24 4e6h_A MRNA 3'-END-processing 72.3 17 0.00059 34.6 9.3 92 74-188 487-579 (679)
25 3ma5_A Tetratricopeptide repea 72.3 13 0.00044 24.9 6.3 34 90-123 37-70 (100)
26 4gco_A Protein STI-1; structur 72.0 23 0.00078 24.9 9.8 84 89-193 42-125 (126)
27 2ho1_A Type 4 fimbrial biogene 71.8 21 0.00071 26.4 7.9 29 94-122 105-133 (252)
28 3ro2_A PINS homolog, G-protein 69.4 33 0.0011 25.6 11.2 79 94-178 83-174 (338)
29 2uy1_A Cleavage stimulation fa 69.3 8.3 0.00028 34.5 6.0 31 93-123 212-242 (493)
30 3k9i_A BH0479 protein; putativ 68.9 24 0.00081 23.8 9.0 68 91-177 24-91 (117)
31 3sf4_A G-protein-signaling mod 67.0 44 0.0015 26.2 10.9 84 94-183 87-183 (406)
32 1na3_A Designed protein CTPR2; 65.5 21 0.00072 22.0 6.3 34 90-123 39-72 (91)
33 1elw_A TPR1-domain of HOP; HOP 65.0 16 0.00055 23.0 5.3 32 92-123 36-67 (118)
34 3k9i_A BH0479 protein; putativ 63.8 24 0.00081 23.8 6.3 35 90-124 57-91 (117)
35 1xnf_A Lipoprotein NLPI; TPR, 63.1 15 0.00053 27.2 5.6 29 94-122 43-71 (275)
36 2pl2_A Hypothetical conserved 63.1 46 0.0016 25.1 8.5 35 89-123 34-68 (217)
37 3sf4_A G-protein-signaling mod 63.0 53 0.0018 25.7 13.9 79 94-185 267-345 (406)
38 2fo7_A Synthetic consensus TPR 62.5 27 0.00092 22.2 9.2 29 94-122 69-97 (136)
39 3as5_A MAMA; tetratricopeptide 62.5 34 0.0011 23.3 9.8 32 92-123 74-105 (186)
40 2ond_A Cleavage stimulation fa 61.5 14 0.00046 29.5 5.4 31 92-122 97-127 (308)
41 2e2e_A Formate-dependent nitri 61.5 40 0.0014 23.8 12.0 30 93-122 43-72 (177)
42 3uq3_A Heat shock protein STI1 61.4 44 0.0015 24.2 9.8 86 74-175 22-107 (258)
43 1na0_A Designed protein CTPR3; 61.2 22 0.00074 22.6 5.4 31 93-123 42-72 (125)
44 1elw_A TPR1-domain of HOP; HOP 61.1 28 0.00095 21.9 9.5 30 94-123 4-33 (118)
45 2kat_A Uncharacterized protein 60.5 34 0.0012 22.6 8.5 35 90-124 49-83 (115)
46 4a1s_A PINS, partner of inscut 60.3 63 0.0022 25.7 11.7 76 94-182 263-338 (411)
47 2ho1_A Type 4 fimbrial biogene 60.2 49 0.0017 24.4 9.3 32 92-123 139-170 (252)
48 1xnf_A Lipoprotein NLPI; TPR, 60.0 50 0.0017 24.4 10.1 34 90-123 73-106 (275)
49 2kck_A TPR repeat; tetratricop 60.0 25 0.00086 22.0 5.5 34 93-126 75-109 (112)
50 2vq2_A PILW, putative fimbrial 59.6 44 0.0015 23.7 9.5 30 94-123 113-142 (225)
51 3vtx_A MAMA; tetratricopeptide 59.6 28 0.00097 24.7 6.3 30 94-123 107-136 (184)
52 2pl2_A Hypothetical conserved 59.2 55 0.0019 24.7 9.3 67 90-176 114-180 (217)
53 3rjv_A Putative SEL1 repeat pr 58.5 32 0.0011 26.1 6.8 39 83-122 8-46 (212)
54 2ooe_A Cleavage stimulation fa 58.4 8.2 0.00028 33.3 3.8 55 74-131 29-83 (530)
55 4h7y_A Dual specificity protei 57.9 37 0.0013 28.0 7.4 29 94-122 94-122 (161)
56 2lni_A Stress-induced-phosphop 57.7 36 0.0012 22.1 6.3 33 91-123 81-113 (133)
57 4eqf_A PEX5-related protein; a 57.7 68 0.0023 25.3 12.8 66 94-178 247-312 (365)
58 3u4t_A TPR repeat-containing p 57.5 56 0.0019 24.2 9.4 31 92-122 35-65 (272)
59 2l6j_A TPR repeat-containing p 57.4 34 0.0012 21.7 9.0 68 76-152 23-90 (111)
60 4gcn_A Protein STI-1; structur 57.3 46 0.0016 23.2 11.8 88 89-191 37-124 (127)
61 3upv_A Heat shock protein STI1 57.1 37 0.0013 22.6 6.3 34 90-123 68-101 (126)
62 1a17_A Serine/threonine protei 56.9 37 0.0013 23.0 6.3 29 94-122 81-109 (166)
63 2vyi_A SGTA protein; chaperone 56.7 36 0.0012 21.7 6.3 29 94-122 46-74 (131)
64 3sz7_A HSC70 cochaperone (SGT) 56.5 34 0.0012 24.2 6.3 35 90-124 75-109 (164)
65 2vyi_A SGTA protein; chaperone 55.7 37 0.0013 21.6 10.7 30 94-123 12-41 (131)
66 3mkr_A Coatomer subunit epsilo 55.3 80 0.0027 25.4 11.4 90 90-200 196-285 (291)
67 3ro2_A PINS homolog, G-protein 54.9 63 0.0022 24.0 11.8 76 94-182 223-298 (338)
68 2xev_A YBGF; tetratricopeptide 54.4 34 0.0012 22.5 5.7 51 75-125 57-107 (129)
69 2vsy_A XCC0866; transferase, g 54.3 1.1E+02 0.0037 26.6 10.5 33 91-123 54-86 (568)
70 2dba_A Smooth muscle cell asso 53.8 45 0.0016 22.1 6.3 34 90-123 95-128 (148)
71 1fch_A Peroxisomal targeting s 53.8 76 0.0026 24.6 9.2 68 90-176 94-161 (368)
72 2l6j_A TPR repeat-containing p 53.5 40 0.0014 21.4 11.1 67 94-179 4-70 (111)
73 3ieg_A DNAJ homolog subfamily 53.4 72 0.0025 24.2 8.0 47 74-123 20-66 (359)
74 3ro3_A PINS homolog, G-protein 53.4 45 0.0015 21.9 13.5 96 75-183 27-125 (164)
75 1wao_1 Serine/threonine protei 53.2 55 0.0019 28.8 8.3 47 74-123 23-69 (477)
76 3edt_B KLC 2, kinesin light ch 52.8 64 0.0022 23.5 12.8 75 93-178 42-116 (283)
77 4abn_A Tetratricopeptide repea 52.7 83 0.0029 27.2 9.3 49 92-152 100-149 (474)
78 2e2e_A Formate-dependent nitri 52.6 58 0.002 23.0 9.7 88 91-200 75-165 (177)
79 4i17_A Hypothetical protein; T 52.6 67 0.0023 23.6 10.9 58 90-152 72-129 (228)
80 3as5_A MAMA; tetratricopeptide 52.1 52 0.0018 22.3 9.7 29 94-122 110-138 (186)
81 4b4t_Q 26S proteasome regulato 51.8 93 0.0032 25.1 9.4 75 94-181 95-169 (434)
82 4gco_A Protein STI-1; structur 51.2 48 0.0016 23.2 6.3 33 90-122 77-109 (126)
83 2r5s_A Uncharacterized protein 50.8 30 0.001 24.9 5.3 40 84-123 97-137 (176)
84 1na3_A Designed protein CTPR2; 50.4 41 0.0014 20.6 8.4 65 93-176 8-72 (91)
85 3nf1_A KLC 1, kinesin light ch 49.8 78 0.0027 23.6 10.4 74 93-177 152-225 (311)
86 2c2l_A CHIP, carboxy terminus 49.7 77 0.0026 25.2 8.0 35 89-123 33-67 (281)
87 2xcb_A PCRH, regulatory protei 49.0 55 0.0019 22.7 6.3 36 89-124 81-116 (142)
88 3vtx_A MAMA; tetratricopeptide 49.0 67 0.0023 22.6 9.7 35 89-123 68-102 (184)
89 1na0_A Designed protein CTPR3; 48.6 48 0.0017 20.9 10.7 30 94-123 9-38 (125)
90 1elr_A TPR2A-domain of HOP; HO 48.6 50 0.0017 21.1 6.8 48 75-122 56-107 (131)
91 2ond_A Cleavage stimulation fa 48.5 41 0.0014 26.7 6.2 33 91-123 200-232 (308)
92 3gw4_A Uncharacterized protein 47.8 70 0.0024 22.5 13.5 97 74-182 43-142 (203)
93 4e6h_A MRNA 3'-END-processing 47.7 99 0.0034 29.4 9.6 34 93-126 342-376 (679)
94 1a17_A Serine/threonine protei 46.9 64 0.0022 21.8 10.7 34 90-123 43-76 (166)
95 2vsy_A XCC0866; transferase, g 46.2 85 0.0029 27.3 8.3 34 90-123 19-52 (568)
96 1ihg_A Cyclophilin 40; ppiase 46.2 1.4E+02 0.0046 25.3 11.1 84 93-197 272-355 (370)
97 4abn_A Tetratricopeptide repea 45.8 1.4E+02 0.0047 25.9 9.5 71 90-176 209-287 (474)
98 1mr1_C SKI oncogene, SKI, C-SK 45.7 11 0.00037 29.0 2.2 32 170-201 67-98 (99)
99 3u4t_A TPR repeat-containing p 45.0 51 0.0017 24.5 5.9 34 90-123 104-137 (272)
100 4i17_A Hypothetical protein; T 44.7 90 0.0031 22.9 9.1 66 92-176 40-105 (228)
101 3urz_A Uncharacterized protein 44.2 97 0.0033 23.1 9.9 34 90-123 34-83 (208)
102 2y4t_A DNAJ homolog subfamily 43.8 1.2E+02 0.004 24.4 8.3 68 90-176 56-123 (450)
103 1ouv_A Conserved hypothetical 43.7 85 0.0029 23.8 7.1 87 85-193 30-120 (273)
104 4eqf_A PEX5-related protein; a 43.6 1.2E+02 0.004 23.9 13.4 34 90-123 95-128 (365)
105 1hxi_A PEX5, peroxisome target 43.6 40 0.0014 23.3 4.8 34 89-122 80-113 (121)
106 3gw4_A Uncharacterized protein 43.6 83 0.0028 22.1 13.6 77 93-182 25-101 (203)
107 3fp2_A TPR repeat-containing p 43.3 1.2E+02 0.004 25.1 8.3 38 90-127 458-495 (537)
108 3gyz_A Chaperone protein IPGC; 43.2 64 0.0022 23.9 6.2 37 89-125 99-135 (151)
109 2ooe_A Cleavage stimulation fa 43.2 82 0.0028 27.0 7.6 45 76-123 257-315 (530)
110 3edt_B KLC 2, kinesin light ch 43.0 94 0.0032 22.6 12.6 76 92-178 83-158 (283)
111 2r5s_A Uncharacterized protein 42.6 91 0.0031 22.3 8.7 33 90-122 36-68 (176)
112 4h7y_A Dual specificity protei 42.5 95 0.0033 25.5 7.5 59 85-147 4-68 (161)
113 2vgx_A Chaperone SYCD; alterna 42.5 74 0.0025 22.7 6.3 37 89-125 84-120 (148)
114 2q7f_A YRRB protein; TPR, prot 42.0 95 0.0032 22.4 9.9 31 93-123 124-154 (243)
115 3nf1_A KLC 1, kinesin light ch 41.9 1.1E+02 0.0036 22.9 11.5 74 93-177 68-141 (311)
116 4i0x_A ESAT-6-like protein MAB 41.8 87 0.003 21.9 7.5 44 95-141 4-47 (94)
117 1fch_A Peroxisomal targeting s 41.8 1.2E+02 0.0041 23.5 11.7 17 162-178 300-316 (368)
118 4g1t_A Interferon-induced prot 41.7 18 0.00061 29.7 3.1 47 76-122 411-458 (472)
119 3mkr_A Coatomer subunit epsilo 41.4 68 0.0023 25.8 6.5 29 91-119 98-126 (291)
120 3rkv_A Putative peptidylprolyl 41.1 90 0.0031 21.9 10.4 66 93-177 62-127 (162)
121 2fbn_A 70 kDa peptidylprolyl i 40.0 1E+02 0.0036 22.3 11.5 84 95-199 89-172 (198)
122 2q7f_A YRRB protein; TPR, prot 39.7 1E+02 0.0035 22.1 10.4 34 91-124 88-121 (243)
123 1hh8_A P67PHOX, NCF-2, neutrop 39.4 1E+02 0.0035 22.0 8.3 65 93-176 36-100 (213)
124 3urz_A Uncharacterized protein 38.3 86 0.0029 23.4 6.3 35 89-123 83-117 (208)
125 4gyw_A UDP-N-acetylglucosamine 38.3 1.2E+02 0.0041 28.8 8.6 31 92-122 41-71 (723)
126 4i0x_B ESAT-6-like protein MAB 37.9 1.1E+02 0.0036 21.7 7.2 47 95-143 15-62 (103)
127 3hym_B Cell division cycle pro 36.9 1.3E+02 0.0045 22.6 11.2 33 93-125 192-224 (330)
128 3qou_A Protein YBBN; thioredox 36.0 85 0.0029 24.9 6.2 36 88-123 213-248 (287)
129 3rkv_A Putative peptidylprolyl 35.3 1.1E+02 0.0039 21.3 6.4 34 90-123 93-126 (162)
130 2xpi_A Anaphase-promoting comp 35.1 2E+02 0.0069 24.2 9.6 30 94-123 475-504 (597)
131 1ouv_A Conserved hypothetical 34.9 1.5E+02 0.005 22.4 10.9 81 93-194 73-157 (273)
132 2d1l_A Metastasis suppressor p 34.6 2.2E+02 0.0075 24.4 9.0 52 70-122 5-62 (253)
133 4b4t_Q 26S proteasome regulato 33.8 1.8E+02 0.0063 23.3 13.1 76 94-182 135-210 (434)
134 2y4t_A DNAJ homolog subfamily 33.3 1.9E+02 0.0064 23.2 9.9 34 90-123 173-206 (450)
135 3bee_A Putative YFRE protein; 33.3 90 0.0031 21.5 5.3 47 83-129 31-78 (93)
136 1p68_A De novo designed protei 33.2 51 0.0017 24.9 4.2 47 157-203 24-78 (102)
137 2fbn_A 70 kDa peptidylprolyl i 33.2 1.2E+02 0.0042 21.9 6.3 34 90-123 118-151 (198)
138 3fav_A ESAT-6-like protein ESX 32.7 49 0.0017 23.1 3.9 43 96-141 12-54 (101)
139 3ieg_A DNAJ homolog subfamily 32.3 1.6E+02 0.0056 22.2 9.9 34 90-123 150-183 (359)
140 1hh8_A P67PHOX, NCF-2, neutrop 32.0 1.4E+02 0.0047 21.3 11.4 38 90-127 67-104 (213)
141 1ufz_A Hypothetical protein BA 31.7 30 0.001 25.8 2.7 16 187-202 32-47 (83)
142 1p5q_A FKBP52, FK506-binding p 31.3 2.2E+02 0.0074 23.3 9.2 34 94-127 147-180 (336)
143 1m3w_A H10H24; four-helix bund 30.9 38 0.0013 21.0 2.6 30 92-121 2-31 (32)
144 4gyw_A UDP-N-acetylglucosamine 30.8 1.9E+02 0.0063 27.5 8.6 33 90-122 73-105 (723)
145 2gsc_A Putative uncharacterize 30.5 98 0.0034 23.2 5.5 53 129-202 65-117 (128)
146 3qwp_A SET and MYND domain-con 30.3 2.8E+02 0.0096 24.3 10.3 97 94-201 329-427 (429)
147 1qqe_A Vesicular transport pro 30.2 2E+02 0.0068 22.6 12.0 81 94-186 158-238 (292)
148 3u3w_A Transcriptional activat 29.8 2E+02 0.0068 22.4 10.3 73 94-178 155-227 (293)
149 2if4_A ATFKBP42; FKBP-like, al 29.6 82 0.0028 26.0 5.3 34 94-127 179-212 (338)
150 1kt0_A FKBP51, 51 kDa FK506-bi 28.5 2.8E+02 0.0097 23.8 11.2 64 94-176 317-380 (457)
151 3cv0_A Peroxisome targeting si 28.4 1.9E+02 0.0064 21.7 12.5 99 82-199 42-167 (327)
152 3n71_A Histone lysine methyltr 28.2 3.4E+02 0.011 24.5 11.0 95 94-199 351-447 (490)
153 2vq2_A PILW, putative fimbrial 27.9 1.6E+02 0.0054 20.7 9.8 31 93-123 41-71 (225)
154 2fo7_A Synthetic consensus TPR 26.2 1.2E+02 0.0043 18.9 10.4 34 90-123 31-64 (136)
155 2xm6_A Protein corresponding t 25.9 3E+02 0.01 23.2 8.6 68 93-177 362-433 (490)
156 3qky_A Outer membrane assembly 25.9 2.1E+02 0.0073 21.5 11.3 94 77-177 72-178 (261)
157 3ulq_A Response regulator aspa 25.9 2.6E+02 0.0088 22.4 11.1 76 94-182 184-259 (383)
158 1xi4_A Clathrin heavy chain; a 25.2 1.6E+02 0.0054 32.0 7.5 41 93-143 1104-1144(1630)
159 2pzi_A Probable serine/threoni 25.1 2.3E+02 0.008 25.9 7.9 33 91-123 464-496 (681)
160 3ulq_A Response regulator aspa 24.7 2.7E+02 0.0093 22.3 13.1 78 94-183 143-220 (383)
161 2gw1_A Mitochondrial precursor 24.6 2.8E+02 0.0096 22.4 8.1 75 82-175 27-101 (514)
162 3q15_A PSP28, response regulat 24.2 2.8E+02 0.0096 22.3 10.9 107 72-192 197-306 (378)
163 1uer_A SOD, superoxide dismuta 23.9 65 0.0022 26.5 3.6 27 103-129 97-123 (191)
164 1kt0_A FKBP51, 51 kDa FK506-bi 23.8 3.5E+02 0.012 23.3 9.2 59 94-152 268-329 (457)
165 2nyb_A Superoxide dismutase [F 23.6 66 0.0023 26.5 3.6 26 104-129 97-122 (192)
166 1my6_A Iron (III) superoxide d 23.5 66 0.0023 26.6 3.6 26 104-129 103-128 (199)
167 3q49_B STIP1 homology and U bo 23.5 1.6E+02 0.0055 19.3 8.7 37 90-126 73-109 (137)
168 2gpc_A Iron superoxide dismuta 23.1 68 0.0023 26.5 3.6 26 104-129 99-124 (194)
169 2rcv_A Superoxide dismutase [M 23.1 68 0.0023 26.6 3.6 25 105-129 107-131 (202)
170 1mng_A Manganese superoxide di 23.0 67 0.0023 26.7 3.5 26 104-129 107-132 (203)
171 1dt0_A Superoxide dismutase; p 22.7 68 0.0023 26.6 3.5 26 104-129 97-122 (197)
172 4ioe_A Secreted protein ESXB; 22.6 1.6E+02 0.0056 19.6 5.0 32 100-132 18-49 (93)
173 2ifu_A Gamma-SNAP; membrane fu 22.2 2.9E+02 0.01 21.8 11.6 71 94-178 76-146 (307)
174 1w3b_A UDP-N-acetylglucosamine 22.1 1.5E+02 0.005 23.6 5.3 29 94-122 237-265 (388)
175 2rld_A Uncharacterized protein 21.9 2.3E+02 0.0078 21.0 6.1 52 130-202 62-113 (121)
176 1w3b_A UDP-N-acetylglucosamine 21.8 3E+02 0.01 21.8 8.5 29 94-122 67-95 (388)
177 3vrc_A Cytochrome C'; C-type c 21.6 1.8E+02 0.0062 22.1 5.5 48 129-177 77-124 (131)
178 3cei_A Superoxide dismutase; o 21.5 76 0.0026 26.7 3.6 26 104-129 96-121 (213)
179 1xre_A SODA-2, superoxide dism 21.4 74 0.0025 26.8 3.5 25 105-129 117-141 (217)
180 3e4b_A ALGK; tetratricopeptide 21.3 2.8E+02 0.0096 23.7 7.3 15 107-121 264-278 (452)
181 1ix9_A Mnsod, superoxide dismu 21.2 78 0.0027 26.3 3.6 25 105-129 104-128 (205)
182 1pl4_A Superoxide dismutase [M 21.2 77 0.0026 26.2 3.5 25 105-129 99-123 (198)
183 3de8_A Soluble cytochrome B562 21.1 2.3E+02 0.008 20.2 6.3 12 94-105 56-67 (106)
184 2c2l_A CHIP, carboxy terminus 21.1 1.6E+02 0.0056 23.2 5.4 36 90-125 68-103 (281)
185 2awp_A Iron super-oxide dismut 21.0 65 0.0022 26.7 3.1 26 104-129 98-123 (198)
186 2pzi_A Probable serine/threoni 21.0 3.4E+02 0.012 24.8 8.1 34 90-123 429-462 (681)
187 1gv3_A Manganese superoxide di 21.0 77 0.0026 27.4 3.6 26 104-129 141-166 (248)
188 1ma1_A Superoxide dismutase; m 20.8 78 0.0027 26.3 3.5 25 105-129 108-132 (205)
189 1b06_A Protein (superoxide dis 20.8 80 0.0027 26.3 3.6 25 105-129 111-135 (210)
190 1p5q_A FKBP52, FK506-binding p 20.7 3.5E+02 0.012 22.1 12.4 64 94-176 196-259 (336)
No 1
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.20 E-value=0.044 Score=37.41 Aligned_cols=95 Identities=13% Similarity=0.020 Sum_probs=71.8
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..+.+|-.++..+...|+++.|.+...+.++--. .++.+-..|..+|... .+...|..+
T Consensus 15 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------------~~~~~~~~la~~~~~~-------g~~~~A~~~ 75 (115)
T 2kat_A 15 GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDP------------TYSVAWKWLGKTLQGQ-------GDRAGARQA 75 (115)
T ss_dssp TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHH-------TCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC------------CcHHHHHHHHHHHHHc-------CCHHHHHHH
Confidence 344589999999999999999999999999887421 1234556677777762 345578889
Q ss_pred hHHHHHhhcCCCCcHhHHHHHHHHHHHHHhhccC
Q 028535 170 LKNVLKQAEGFSDMEEFRDLHACLDELKTKLQSG 203 (207)
Q Consensus 170 Lk~~lKqae~F~ete~~k~L~acL~Ev~~~~~s~ 203 (207)
++..++......+....+++...|..+.......
T Consensus 76 ~~~al~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 109 (115)
T 2kat_A 76 WESGLAAAQSRGDQQVVKELQVFLRRLAREDALE 109 (115)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccHHHHHHHHHHHHHhccccCcc
Confidence 9988888766677778888888888877655443
No 2
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=94.48 E-value=0.18 Score=34.41 Aligned_cols=88 Identities=10% Similarity=0.006 Sum_probs=67.1
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHL 170 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHL 170 (207)
+..+++|-.++..+...|+++.|.+.+.+.++--- + +..+-..|..+|... .+...|.-.+
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--------~----~~~a~~~lg~~~~~~-------g~~~~A~~~~ 64 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDP--------D----YVGTYYHLGKLYERL-------DRTDDAIDTY 64 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--------T----CTHHHHHHHHHHHHT-------TCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--------C----cHHHHHHHHHHHHHc-------CCHHHHHHHH
Confidence 34588999999999999999999999999887321 1 233555677777762 3455788899
Q ss_pred HHHHHhhcCCCCcHhHHHHHHHHHHHH
Q 028535 171 KNVLKQAEGFSDMEEFRDLHACLDELK 197 (207)
Q Consensus 171 k~~lKqae~F~ete~~k~L~acL~Ev~ 197 (207)
+..++.+....+....++|+..|.+..
T Consensus 65 ~~al~l~~~~~~~~~~~~l~~~l~~~~ 91 (100)
T 3ma5_A 65 AQGIEVAREEGTQKDLSELQDAKLKAE 91 (100)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcCCchhHHHHHHHHHHHcc
Confidence 999988888888888888888887643
No 3
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=94.03 E-value=0.87 Score=30.61 Aligned_cols=109 Identities=12% Similarity=0.081 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHH
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEI 153 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei 153 (207)
+.-.+.+.++++.--++.-.++.|-..+.-+...|+++.|.+...+.++....+.+ ...+-..++.+|+..
T Consensus 19 ~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~---------~~~~~~~la~~~~~~ 89 (129)
T 2xev_A 19 DDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK---------AAGGLLKLGLSQYGE 89 (129)
T ss_dssp HHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT---------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc---------cHHHHHHHHHHHHHc
Confidence 33444444444432222222389999999999999999999999998875433321 345566777788762
Q ss_pred hcCCCcchhhHHHHHHhHHHHHhhcCCCCcHhHHHHHHHHHHHHHhhc
Q 028535 154 SSSSGSRRELFAAEMHLKNVLKQAEGFSDMEEFRDLHACLDELKTKLQ 201 (207)
Q Consensus 154 ~s~~G~~reL~sA~MHLk~~lKqae~F~ete~~k~L~acL~Ev~~~~~ 201 (207)
.+...|.-+++.+++. |++.+.......-|.+++..++
T Consensus 90 -------g~~~~A~~~~~~~~~~---~p~~~~~~~a~~~l~~l~~~~~ 127 (129)
T 2xev_A 90 -------GKNTEAQQTLQQVATQ---YPGSDAARVAQERLQSIRLGQQ 127 (129)
T ss_dssp -------TCHHHHHHHHHHHHHH---STTSHHHHHHHHHHHHHC----
T ss_pred -------CCHHHHHHHHHHHHHH---CCCChHHHHHHHHHHHHHhhhh
Confidence 3455788888877664 6777777777777777766554
No 4
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=93.52 E-value=1.2 Score=30.41 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=66.1
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..+++|-..+.-+..+|+++.|.+...+.++-- .. +..+-..++.+|+.. .+...|.-+
T Consensus 34 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p~----~~~~~~~lg~~~~~~-------~~~~~A~~~ 94 (126)
T 3upv_A 34 APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD--------PN----FVRAYIRKATAQIAV-------KEYASALET 94 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TT----CHHHHHHHHHHHHHT-------TCHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CC----cHHHHHHHHHHHHHH-------hCHHHHHHH
Confidence 44558999999999999999999999999988742 11 234556677777762 345578888
Q ss_pred hHHHHHhhcCCCCcHhHHHHHHHHHHHHHhh
Q 028535 170 LKNVLKQAEGFSDMEEFRDLHACLDELKTKL 200 (207)
Q Consensus 170 Lk~~lKqae~F~ete~~k~L~acL~Ev~~~~ 200 (207)
++..++...++.+.+....+...|..+...+
T Consensus 95 ~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 95 LDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 8888887755555555666666666665544
No 5
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=91.12 E-value=1.8 Score=31.53 Aligned_cols=91 Identities=11% Similarity=0.027 Sum_probs=59.4
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..++.|-.++.-+...|+++.|.++..+.++--.. +..+-..|..+|+.. .+...|.-+
T Consensus 51 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~------------~~~~~~~lg~~~~~~-------g~~~~A~~~ 111 (148)
T 2vgx_A 51 DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX------------EPRFPFHAAECLLQX-------GELAEAESG 111 (148)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------------CTHHHHHHHHHHHHT-------TCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC------------CchHHHHHHHHHHHc-------CCHHHHHHH
Confidence 4445899999999999999999999999998873211 123445677777762 344578888
Q ss_pred hHHHHHhhcCCCC-cHhHHHHHHHHHHHHHh
Q 028535 170 LKNVLKQAEGFSD-MEEFRDLHACLDELKTK 199 (207)
Q Consensus 170 Lk~~lKqae~F~e-te~~k~L~acL~Ev~~~ 199 (207)
++..++.....++ .+.....+.+|+.++..
T Consensus 112 ~~~al~~~p~~~~~~~~~~~~~~~l~~l~~~ 142 (148)
T 2vgx_A 112 LFLAQELIANXPEFXELSTRVSSMLEAIKLK 142 (148)
T ss_dssp HHHHHHHHTTCGGGHHHHHHHHHHHHHC---
T ss_pred HHHHHHHCcCCCcchHHHHHHHHHHHHHHhH
Confidence 8888877642222 22223555566655544
No 6
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=88.89 E-value=4.9 Score=28.71 Aligned_cols=92 Identities=10% Similarity=-0.022 Sum_probs=64.6
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..+.+|-.++.-+..+|+++.|.+...+.++--.. ++.+-..|+.+|+.. .+...|.-+
T Consensus 41 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~------------~~~~~~~lg~~~~~~-------g~~~~A~~~ 101 (164)
T 3sz7_A 41 APANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK------------YSKAWSRLGLARFDM-------ADYKGAKEA 101 (164)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHc-------cCHHHHHHH
Confidence 4445899999999999999999999999998874221 245556677778762 345578888
Q ss_pred hHHHHHhhcCCCCcHhHHHHHHHHHHHHHhh
Q 028535 170 LKNVLKQAEGFSDMEEFRDLHACLDELKTKL 200 (207)
Q Consensus 170 Lk~~lKqae~F~ete~~k~L~acL~Ev~~~~ 200 (207)
++..++..-.+.+.-....+..+...+....
T Consensus 102 ~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 102 YEKGIEAEGNGGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp HHHHHHHHSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Confidence 8888887766555333445555555554443
No 7
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=87.79 E-value=6.5 Score=28.78 Aligned_cols=29 Identities=17% Similarity=0.108 Sum_probs=15.6
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|..++..+...|+++.|.+...+.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 167 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIK 167 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 45555555555555555555555555444
No 8
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=87.31 E-value=6.1 Score=29.68 Aligned_cols=86 Identities=9% Similarity=0.019 Sum_probs=60.9
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
..+..++.|-.++.-+..+|+++.|.++..|.++---. ++.+-..|..+|+.. .+...|.-
T Consensus 65 ~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~------------~~~~~~~lg~~~~~l-------g~~~eA~~ 125 (151)
T 3gyz_A 65 YDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN------------DYTPVFHTGQCQLRL-------KAPLKAKE 125 (151)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSS------------CCHHHHHHHHHHHHT-------TCHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCC------------CcHHHHHHHHHHHHc-------CCHHHHHH
Confidence 35555999999999999999999999999999983221 124555677778762 33457888
Q ss_pred HhHHHHHhhcCCCCcHhHHHHHHHHHHH
Q 028535 169 HLKNVLKQAEGFSDMEEFRDLHACLDEL 196 (207)
Q Consensus 169 HLk~~lKqae~F~ete~~k~L~acL~Ev 196 (207)
+++.+++.. ++.+.-++-+.+|+.+
T Consensus 126 ~~~~al~l~---~~~~~~~~A~~ll~~l 150 (151)
T 3gyz_A 126 CFELVIQHS---NDEKLKIKAQSYLDAI 150 (151)
T ss_dssp HHHHHHHHC---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC---CCHHHHHHHHHHHHhh
Confidence 888887765 4555444555555543
No 9
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=86.89 E-value=3.1 Score=26.42 Aligned_cols=85 Identities=9% Similarity=0.049 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHH
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEI 153 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei 153 (207)
+.-...+.++++. .+..+++|-.+|..+...|+++.|.+...+.++.... .....+-..|+.+|+..
T Consensus 23 ~~A~~~~~~a~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~----------~~~~~~~~~l~~~~~~~ 89 (112)
T 2kck_A 23 TESIDLFEKAIQL---DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED----------EYNKDVWAAKADALRYI 89 (112)
T ss_dssp HHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC----------TTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh---CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc----------cchHHHHHHHHHHHHHH
Confidence 3444445454442 3344899999999999999999999999888874221 01224455666777652
Q ss_pred hcCCCcchhhHHHHHHhHHHHHhh
Q 028535 154 SSSSGSRRELFAAEMHLKNVLKQA 177 (207)
Q Consensus 154 ~s~~G~~reL~sA~MHLk~~lKqa 177 (207)
. .+...|.-+++.+++..
T Consensus 90 ~------~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 90 E------GKEVEAEIAEARAKLEH 107 (112)
T ss_dssp S------SCSHHHHHHHHHHGGGC
T ss_pred h------CCHHHHHHHHHHHhhcc
Confidence 0 23346777777776653
No 10
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=80.93 E-value=12 Score=26.22 Aligned_cols=92 Identities=9% Similarity=-0.047 Sum_probs=61.3
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
..+..+++|-.++.-+...|+++.|.+...+.++--.. ...+-..|..+|+.. .+...|.-
T Consensus 47 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------------~~~~~~~lg~~~~~~-------g~~~~A~~ 107 (142)
T 2xcb_A 47 LDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN------------EPRFPFHAAECHLQL-------GDLDGAES 107 (142)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CTHHHHHHHHHHHHT-------TCHHHHHH
T ss_pred hCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC------------CcHHHHHHHHHHHHc-------CCHHHHHH
Confidence 34455899999999999999999999999998874221 112335566677752 34457888
Q ss_pred HhHHHHHhhcCCCC-cHhHHHHHHHHHHHHHh
Q 028535 169 HLKNVLKQAEGFSD-MEEFRDLHACLDELKTK 199 (207)
Q Consensus 169 HLk~~lKqae~F~e-te~~k~L~acL~Ev~~~ 199 (207)
+++..++..-..++ .+..+.....|+.+++.
T Consensus 108 ~~~~al~~~p~~~~~~~~~~~~~~~l~~l~~~ 139 (142)
T 2xcb_A 108 GFYSARALAAAQPAHEALAARAGAMLEAVTAR 139 (142)
T ss_dssp HHHHHHHHHHTCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHHHhc
Confidence 88888877643222 23333566666666554
No 11
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=80.35 E-value=11 Score=27.16 Aligned_cols=69 Identities=9% Similarity=0.065 Sum_probs=48.9
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..++.|-.++.-+...|+++.|.+...+.++- ++. +..+-..|+.+|+..-. ..+ +|+-+
T Consensus 61 ~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~----~~~~~~~la~~~~~~~~----~~~--aa~~~ 122 (150)
T 4ga2_A 61 QERDPKAHRFLGLLYELEENTDKAVECYRRSVEL--------NPT----QKDLVLKIAELLCKNDV----TDG--RAKYW 122 (150)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT----CHHHHHHHHHHHHHHCS----SSS--HHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCC----CHHHHHHHHHHHHHcCC----hHH--HHHHH
Confidence 4455999999999999999999999999988873 221 23566778888886321 122 56666
Q ss_pred hHHHHHh
Q 028535 170 LKNVLKQ 176 (207)
Q Consensus 170 Lk~~lKq 176 (207)
++..++.
T Consensus 123 ~~~al~l 129 (150)
T 4ga2_A 123 VERAAKL 129 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6665554
No 12
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=78.81 E-value=23 Score=28.27 Aligned_cols=101 Identities=13% Similarity=-0.037 Sum_probs=61.1
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhcc---------------CccccchhHHHH-------HHHHHHHH
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQG---------------SDLWKDRDRFKR-------FSYASLEL 146 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqg---------------S~w~kD~~~F~k-------ya~Asl~L 146 (207)
..+..++.|-.+|+-+...|+++.|.+.+.+.++.-.. .........|++ ...+-..|
T Consensus 146 ~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~l 225 (287)
T 3qou_A 146 LSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQL 225 (287)
T ss_dssp HTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHH
Confidence 34455889999999999999999998887765442111 011111112221 12334445
Q ss_pred HHHHHHHhcCCCcchhhHHHHHHhHHHHHhhcCCCCcHhHHHHHHHHHHH
Q 028535 147 CKVYMEISSSSGSRRELFAAEMHLKNVLKQAEGFSDMEEFRDLHACLDEL 196 (207)
Q Consensus 147 c~vY~ei~s~~G~~reL~sA~MHLk~~lKqae~F~ete~~k~L~acL~Ev 196 (207)
+.+|+. ..+...|.-+++.+++.--++.+.+.+..|-.++...
T Consensus 226 a~~l~~-------~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~ 268 (287)
T 3qou_A 226 ALQLHQ-------VGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAAL 268 (287)
T ss_dssp HHHHHH-------TTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHH
T ss_pred HHHHHH-------cccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHc
Confidence 555553 1334478888888888766676677777777766654
No 13
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=78.48 E-value=12 Score=24.78 Aligned_cols=73 Identities=14% Similarity=-0.050 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|...+..+...|+++.|.+...+.+.-.+..+.. ...+.+-..|+.+|+.. .+...|.-+++..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~------~~~~~~~~~la~~~~~~-------g~~~~A~~~~~~a 155 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDR------IGEGRACWSLGNAYTAL-------GNHDQAMHFAEKH 155 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHH-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccch------HhHHHHHHHHHHHHHHc-------cCHHHHHHHHHHH
Confidence 5677778888888888888888888877765543311 12244455566666652 2344677777777
Q ss_pred HHhhcC
Q 028535 174 LKQAEG 179 (207)
Q Consensus 174 lKqae~ 179 (207)
++.+++
T Consensus 156 ~~~~~~ 161 (164)
T 3ro3_A 156 LEISRE 161 (164)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 766543
No 14
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=77.01 E-value=22 Score=27.07 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCC---cchhhHHHHHHhHHHH
Q 028535 98 GLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSG---SRRELFAAEMHLKNVL 174 (207)
Q Consensus 98 gLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G---~~reL~sA~MHLk~~l 174 (207)
-..|+.+...|+++.|++...+.+.....+.+ ...+-..|+.+|...-...- ...+.-.|.-+++.++
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~---------~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~ 222 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAYPDTPW---------ADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLL 222 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT---------HHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHCCCCch---------HHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHH
Confidence 55699999999999999999998876544322 34566677788876421100 1245557777777765
Q ss_pred HhhcCCCCcHhHHHHHHHHHHHHHhh
Q 028535 175 KQAEGFSDMEEFRDLHACLDELKTKL 200 (207)
Q Consensus 175 Kqae~F~ete~~k~L~acL~Ev~~~~ 200 (207)
+ .|++++...+....|.++...+
T Consensus 223 ~---~~p~~~~~~~a~~~l~~~~~~~ 245 (261)
T 3qky_A 223 Q---IFPDSPLLRTAEELYTRARQRL 245 (261)
T ss_dssp H---HCTTCTHHHHHHHHHHHHHHHH
T ss_pred H---HCCCChHHHHHHHHHHHHHHHH
Confidence 5 5778777766666665555443
No 15
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.87 E-value=14 Score=24.69 Aligned_cols=65 Identities=14% Similarity=0.020 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|-.++..+...|+++.|.+...+.++-... ...+-..++.+|+.. .+...|.-+++..
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------------~~~~~~~~a~~~~~~-------~~~~~A~~~~~~a 125 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG------------DVKALYRRSQALEKL-------GRLDQAVLDLQRC 125 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC------------CHHHHHHHHHHHHHH-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc------------CHHHHHHHHHHHHHc-------CCHHHHHHHHHHH
Confidence 789999999999999999999999988874211 134445666777652 3445777777777
Q ss_pred HHhh
Q 028535 174 LKQA 177 (207)
Q Consensus 174 lKqa 177 (207)
++..
T Consensus 126 l~~~ 129 (148)
T 2dba_A 126 VSLE 129 (148)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 6653
No 16
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=75.49 E-value=9.1 Score=27.62 Aligned_cols=84 Identities=6% Similarity=-0.015 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHH
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEI 153 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei 153 (207)
..+.+.+-.+.+-+...+..+..|-.+|+.+...|+++.|.+...|.++-- +. ++.+-..|..+|...
T Consensus 11 ~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~--------p~----~~~a~~~lg~~~~~~ 78 (150)
T 4ga2_A 11 ADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ--------ER----DPKAHRFLGLLYELE 78 (150)
T ss_dssp HHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TT----CHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CC----CHHHHHHHHHHHHHc
Confidence 345555544444333333447888899999999999999999999988731 11 234445566667652
Q ss_pred hcCCCcchhhHHHHHHhHHHHHh
Q 028535 154 SSSSGSRRELFAAEMHLKNVLKQ 176 (207)
Q Consensus 154 ~s~~G~~reL~sA~MHLk~~lKq 176 (207)
.+...|..+++..++.
T Consensus 79 -------~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 79 -------ENTDKAVECYRRSVEL 94 (150)
T ss_dssp -------TCHHHHHHHHHHHHHH
T ss_pred -------CchHHHHHHHHHHHHh
Confidence 2344566666665554
No 17
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=75.13 E-value=14 Score=23.82 Aligned_cols=107 Identities=14% Similarity=0.170 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHH
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEI 153 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei 153 (207)
+.-...+.+.++. .+..+.+|-.++..+...|+++.|.+...+.+...... ...+...+.+-..|+.+|+..
T Consensus 21 ~~A~~~~~~a~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~~~~~~~la~~~~~~ 92 (131)
T 1elr_A 21 DTALKHYDKAKEL---DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-----REDYRQIAKAYARIGNSYFKE 92 (131)
T ss_dssp HHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-----TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc---CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-----chhHHHHHHHHHHHHHHHHHh
Confidence 3344444444442 33458999999999999999999999999988754322 122233355566677777752
Q ss_pred hcCCCcchhhHHHHHHhHHHHHhhcCCCCcHhHHHHHHHHHHHHH
Q 028535 154 SSSSGSRRELFAAEMHLKNVLKQAEGFSDMEEFRDLHACLDELKT 198 (207)
Q Consensus 154 ~s~~G~~reL~sA~MHLk~~lKqae~F~ete~~k~L~acL~Ev~~ 198 (207)
.+...|.-+++..++.. ++.+....+..|...++.
T Consensus 93 -------~~~~~A~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 93 -------EKYKDAIHFYNKSLAEH---RTPDVLKKCQQAEKILKE 127 (131)
T ss_dssp -------TCHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHH
T ss_pred -------ccHHHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHHH
Confidence 34557887887776643 445555566666655543
No 18
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=74.63 E-value=19 Score=25.08 Aligned_cols=69 Identities=12% Similarity=-0.046 Sum_probs=48.2
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
..+..++.|-.++.-+...|+++.|.++..+.++-- .+ +..+-..|..+|... .+...|.-
T Consensus 46 ~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--------P~----~~~~~~~la~~~~~~-------g~~~~A~~ 106 (121)
T 1hxi_A 46 KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLD--------PK----DIAVHAALAVSHTNE-------HNANAALA 106 (121)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TT----CHHHHHHHHHHHHHH-------HHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CC----CHHHHHHHHHHHHHc-------CCHHHHHH
Confidence 344559999999999999999999999998888732 21 223445667777652 23446777
Q ss_pred HhHHHHHh
Q 028535 169 HLKNVLKQ 176 (207)
Q Consensus 169 HLk~~lKq 176 (207)
+++..++.
T Consensus 107 ~~~~al~~ 114 (121)
T 1hxi_A 107 SLRAWLLS 114 (121)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 77766654
No 19
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=73.86 E-value=32 Score=27.46 Aligned_cols=86 Identities=19% Similarity=0.243 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|.-++..+..+|+++.|.+...+.++-....+.. + ..+.+.+.++.+|+.. .+...|.-+++..
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~-~~~~~~~~~g~~~~~~-------g~~~~A~~~~~~a 221 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENY-----P-TCYKKCIAQVLVQLHR-------ADYVAAQKCVRES 221 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH-----H-HHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCh-----h-HHHHHHHHHHHHHHHc-------CCHHHHHHHHHHH
Confidence 6788889999999999999999999999876655421 1 2333455566666541 2344677777777
Q ss_pred HHhhcCCCCcHhHHHHHHHH
Q 028535 174 LKQAEGFSDMEEFRDLHACL 193 (207)
Q Consensus 174 lKqae~F~ete~~k~L~acL 193 (207)
+ ....|.++.++..+..++
T Consensus 222 l-~~p~~~~~~e~~~l~~l~ 240 (307)
T 2ifu_A 222 Y-SIPGFSGSEDCAALEDLL 240 (307)
T ss_dssp T-TSTTSTTSHHHHHHHHHH
T ss_pred h-CCCCCCCCHHHHHHHHHH
Confidence 7 444777776666555544
No 20
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=73.32 E-value=14 Score=23.73 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=29.8
Q ss_pred ccchhh-HHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSAD-MWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~d-iWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+. +|-.++..+...|+++.|.+...+.++-
T Consensus 30 ~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 30 EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 444578 9999999999999999999999998874
No 21
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=73.19 E-value=18 Score=24.19 Aligned_cols=90 Identities=11% Similarity=-0.045 Sum_probs=60.2
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
..+..+++|..++..+..+|+++.|.+...+.++-... .+.+-..|+.+|+.. .+...|.-
T Consensus 38 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~------------~~~~~~~l~~~~~~~-------~~~~~A~~ 98 (137)
T 3q49_B 38 RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ------------SVKAHFFLGQCQLEM-------ESYDEAIA 98 (137)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHHH
T ss_pred hCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch------------hHHHHHHHHHHHHHH-------hhHHHHHH
Confidence 34455899999999999999999999999888874321 234556677777752 34557888
Q ss_pred HhHHHHHhhcC--CC-CcHhHHHHHHHHHHHH
Q 028535 169 HLKNVLKQAEG--FS-DMEEFRDLHACLDELK 197 (207)
Q Consensus 169 HLk~~lKqae~--F~-ete~~k~L~acL~Ev~ 197 (207)
+++..++.... .. ..+....|..+.....
T Consensus 99 ~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 99 NLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp HHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887642 11 2333344444444433
No 22
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=72.75 E-value=17 Score=23.69 Aligned_cols=68 Identities=7% Similarity=0.018 Sum_probs=49.5
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHL 170 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHL 170 (207)
+..+++|-.++..+...|+++.|.+...+.+..... .+.+-..|+.+|+.. .+...|.-++
T Consensus 47 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~------------~~~~~~~la~~~~~~-------~~~~~A~~~~ 107 (133)
T 2lni_A 47 PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT------------FIKGYTRKAAALEAM-------KDYTKAMDVY 107 (133)
T ss_dssp TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC------------chHHHHHHHHHHHHH-------hhHHHHHHHH
Confidence 344899999999999999999999999888874221 234555667777752 3455788888
Q ss_pred HHHHHhh
Q 028535 171 KNVLKQA 177 (207)
Q Consensus 171 k~~lKqa 177 (207)
+..++..
T Consensus 108 ~~~~~~~ 114 (133)
T 2lni_A 108 QKALDLD 114 (133)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 8777653
No 23
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=72.62 E-value=35 Score=27.27 Aligned_cols=53 Identities=17% Similarity=0.021 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYME 152 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~e 152 (207)
+.+|...+..+...|+++.|.+...+.++-....+. -...+.+-..|+.+|..
T Consensus 126 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~------~~~~~~~~~~l~~~~~~ 178 (411)
T 4a1s_A 126 AKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGD------RLSEGRALYNLGNVYHA 178 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhc------hHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999988876554431 12345556666677765
No 24
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=72.31 E-value=17 Score=34.61 Aligned_cols=92 Identities=11% Similarity=0.121 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHH
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEI 153 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei 153 (207)
++-..++-+.|++.-. .+++|-.|+++....|+.+.|....-+.+..+.. ..-+..|+..|++.
T Consensus 487 e~Ar~ife~~Lk~~p~---~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~-------------~~~~~~lw~~~~~f 550 (679)
T 4e6h_A 487 KTACKVLELGLKYFAT---DGEYINKYLDFLIYVNEESQVKSLFESSIDKISD-------------SHLLKMIFQKVIFF 550 (679)
T ss_dssp HHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSS-------------TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC---chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-------------HHHHHHHHHHHHHH
Confidence 3344455556665333 3899999999999999999999888888876542 13456788888876
Q ss_pred hcCCCcchhhHHHHHHhHHHHHhhc-CCCCcHhHHH
Q 028535 154 SSSSGSRRELFAAEMHLKNVLKQAE-GFSDMEEFRD 188 (207)
Q Consensus 154 ~s~~G~~reL~sA~MHLk~~lKqae-~F~ete~~k~ 188 (207)
...-|.... ++.+.+++. -|++.+..+.
T Consensus 551 E~~~G~~~~-------~~~v~~R~~~~~P~~~~~~~ 579 (679)
T 4e6h_A 551 ESKVGSLNS-------VRTLEKRFFEKFPEVNKLEE 579 (679)
T ss_dssp HHHTCCSHH-------HHHHHHHHHHHSTTCCHHHH
T ss_pred HHHcCCHHH-------HHHHHHHHHHhCCCCcHHHH
Confidence 665665554 445555544 6776655443
No 25
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=72.29 E-value=13 Score=24.89 Aligned_cols=34 Identities=0% Similarity=-0.021 Sum_probs=29.7
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..++.|-.++.-+..+|+++.|.++..|.++-
T Consensus 37 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 37 DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4445899999999999999999999999888764
No 26
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=72.04 E-value=23 Score=24.90 Aligned_cols=84 Identities=18% Similarity=0.204 Sum_probs=57.9
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
..+..+++|-..+.-+..+|+++.|.+...|.++- |+. ++.+-..|..+|+.. .+...|.-
T Consensus 42 ~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~----~~~a~~~lg~~~~~~-------~~~~~A~~ 102 (126)
T 4gco_A 42 RDPENAILYSNRAACLTKLMEFQRALDDCDTCIRL--------DSK----FIKGYIRKAACLVAM-------REWSKAQR 102 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT----CHHHHHHHHHHHHHT-------TCHHHHHH
T ss_pred hCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh--------hhh----hhHHHHHHHHHHHHC-------CCHHHHHH
Confidence 35555999999999999999999999999998862 222 234555677777762 34557887
Q ss_pred HhHHHHHhhcCCCCcHhHHHHHHHH
Q 028535 169 HLKNVLKQAEGFSDMEEFRDLHACL 193 (207)
Q Consensus 169 HLk~~lKqae~F~ete~~k~L~acL 193 (207)
+++.+|+.- =.+.+....|..||
T Consensus 103 ~~~~al~l~--P~~~~a~~~l~~~l 125 (126)
T 4gco_A 103 AYEDALQVD--PSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHC--TTCHHHHHHHHHHC
T ss_pred HHHHHHHHC--cCCHHHHHHHHHhc
Confidence 887777653 22345555565554
No 27
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=71.76 E-value=21 Score=26.41 Aligned_cols=29 Identities=17% Similarity=0.247 Sum_probs=15.7
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|..++..+...|+++.|.+...+.+.
T Consensus 105 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 105 ARVLNNYGGFLYEQKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 45555555555555555555555555443
No 28
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=69.41 E-value=33 Score=25.62 Aligned_cols=79 Identities=18% Similarity=0.054 Sum_probs=51.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhc-------------CCCcc
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISS-------------SSGSR 160 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s-------------~~G~~ 160 (207)
+.+|...+..+...|+++.|.+...+.++-....+-. ...+.+-..+..+|..... .....
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~ 156 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDK------VGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVR 156 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCc------hHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHH
Confidence 7899999999999999999999999988766554321 2234555666666665222 11112
Q ss_pred hhhHHHHHHhHHHHHhhc
Q 028535 161 RELFAAEMHLKNVLKQAE 178 (207)
Q Consensus 161 reL~sA~MHLk~~lKqae 178 (207)
..+..|.-+++..++.+.
T Consensus 157 ~~~~~A~~~~~~a~~~~~ 174 (338)
T 3ro2_A 157 NALQAAVDLYEENLSLVT 174 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 225566666666665544
No 29
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=69.26 E-value=8.3 Score=34.54 Aligned_cols=31 Identities=10% Similarity=0.308 Sum_probs=29.7
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+++|=.||+|+...|+++.|.+..-+.++.
T Consensus 212 ~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~ 242 (493)
T 2uy1_A 212 AEEVYFFYSEYLIGIGQKEKAKKVVERGIEM 242 (493)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 3999999999999999999999999999998
No 30
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=68.92 E-value=24 Score=23.80 Aligned_cols=68 Identities=9% Similarity=0.113 Sum_probs=47.8
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHL 170 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHL 170 (207)
+..+.+|-.++.-+...|+++.|.+...+.++-... ...+-..|+.+|+.. .+...|.-++
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~------------~~~~~~~l~~~~~~~-------g~~~~A~~~~ 84 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN------------HQALRVFYAMVLYNL-------GRYEQGVELL 84 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHH-------TCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------------chHHHHHHHHHHHHc-------CCHHHHHHHH
Confidence 344899999999999999999999999998874221 134555667777652 2334566677
Q ss_pred HHHHHhh
Q 028535 171 KNVLKQA 177 (207)
Q Consensus 171 k~~lKqa 177 (207)
+..++..
T Consensus 85 ~~al~~~ 91 (117)
T 3k9i_A 85 LKIIAET 91 (117)
T ss_dssp HHHHHHH
T ss_pred HHHHHhC
Confidence 7666654
No 31
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=66.97 E-value=44 Score=26.17 Aligned_cols=84 Identities=18% Similarity=0.075 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhc-------------CCCcc
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISS-------------SSGSR 160 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s-------------~~G~~ 160 (207)
+.+|...+..+...|+++.|.+...+.+.-....+.. ...+.+-..|..+|...-. .....
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~ 160 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDK------VGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVR 160 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH------HHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHH
Confidence 6889999999999999999999999888766543211 2335555666666664221 11122
Q ss_pred hhhHHHHHHhHHHHHhhcCCCCc
Q 028535 161 RELFAAEMHLKNVLKQAEGFSDM 183 (207)
Q Consensus 161 reL~sA~MHLk~~lKqae~F~et 183 (207)
.....|.-+++..++.+....+.
T Consensus 161 ~~~~~A~~~~~~al~~~~~~~~~ 183 (406)
T 3sf4_A 161 DALQAAVDFYEENLSLVTALGDR 183 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHhccCc
Confidence 22556777777666665544443
No 32
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=65.49 E-value=21 Score=21.98 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=27.4
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+.+|-.++..+...|+++.|.+...+.++-
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 39 DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3344788999999999999999999888777763
No 33
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=64.99 E-value=16 Score=23.04 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=21.9
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
..+++|..++..+...|+++.|.+...+.+..
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 36 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 34677777777777777777777776666654
No 34
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=63.80 E-value=24 Score=23.79 Aligned_cols=35 Identities=26% Similarity=0.202 Sum_probs=30.7
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSY 124 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRsl 124 (207)
.+..+++|-.++.-+..+|+++.|.+...+.++..
T Consensus 57 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 57 FPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 44558999999999999999999999999988754
No 35
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=63.10 E-value=15 Score=27.22 Aligned_cols=29 Identities=7% Similarity=0.014 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|-..+..+...|+++.|.+...+.+.
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 71 (275)
T 1xnf_A 43 AQLLYERGVLYDSLGLRALARNDFSQALA 71 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 56666666666666666666666666555
No 36
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=63.07 E-value=46 Score=25.08 Aligned_cols=35 Identities=14% Similarity=-0.037 Sum_probs=30.6
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
..+..++.|-.++..+...|+++.|.+...+.++.
T Consensus 34 ~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 68 (217)
T 2pl2_A 34 ENPQDPEALYWLARTQLKLGLVNPALENGKTLVAR 68 (217)
T ss_dssp TSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34455999999999999999999999999988874
No 37
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=63.02 E-value=53 Score=25.70 Aligned_cols=79 Identities=14% Similarity=-0.032 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|...+..+...|+++.|.+...+.+.-....+- ....+.+-..|+.+|... .+...|.-+++..
T Consensus 267 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~------~~~~~~~~~~la~~~~~~-------g~~~~A~~~~~~a 333 (406)
T 3sf4_A 267 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELND------RIGEGRACWSLGNAYTAL-------GNHDQAMHFAEKH 333 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHHHHH-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHc-------CCHHHHHHHHHHH
Confidence 567777788888888888888887777765544321 112234445555666541 2344566666666
Q ss_pred HHhhcCCCCcHh
Q 028535 174 LKQAEGFSDMEE 185 (207)
Q Consensus 174 lKqae~F~ete~ 185 (207)
++.+....+.+.
T Consensus 334 l~~~~~~~~~~~ 345 (406)
T 3sf4_A 334 LEISREVGDKSG 345 (406)
T ss_dssp HHHHHHTTCHHH
T ss_pred HHHHHHhcCCcc
Confidence 666554444333
No 38
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=62.54 E-value=27 Score=22.18 Aligned_cols=29 Identities=21% Similarity=0.255 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|-.++..+...|+++.|.+...+.+.
T Consensus 69 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 69 AEAWYNLGNAYYKQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 45555556656666666655555544443
No 39
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=62.46 E-value=34 Score=23.26 Aligned_cols=32 Identities=6% Similarity=0.034 Sum_probs=23.5
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
..+.+|-.++..+...|+++.|.+...+.++.
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 34677777788888888888887777776654
No 40
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=61.48 E-value=14 Score=29.54 Aligned_cols=31 Identities=6% Similarity=0.075 Sum_probs=21.6
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
..+.+|-.|+.+....|+++.|.+...|.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 127 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLA 127 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Confidence 3466777777777777777777777766665
No 41
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=61.46 E-value=40 Score=23.85 Aligned_cols=30 Identities=13% Similarity=0.308 Sum_probs=18.1
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
.+++|-.++..+...|+++.|.+...+.+.
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 72 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQ 72 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356666666666666666666666555544
No 42
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=61.44 E-value=44 Score=24.25 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHH
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEI 153 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei 153 (207)
+.-++.+-+.++.- ..+++|...+..+...|+++.|.+...+.+.-.... ...+...+.+-..|+.+|...
T Consensus 22 ~~A~~~~~~a~~~~----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~ 92 (258)
T 3uq3_A 22 DEAIEHYNKAWELH----KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREM-----RADYKVISKSFARIGNAYHKL 92 (258)
T ss_dssp HHHHHHHHHHHHHS----CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh----ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc-----ccchHHHHHHHHHHHHHHHHc
Confidence 33444444554432 348999999999999999999999999988754322 123444566777777787752
Q ss_pred hcCCCcchhhHHHHHHhHHHHH
Q 028535 154 SSSSGSRRELFAAEMHLKNVLK 175 (207)
Q Consensus 154 ~s~~G~~reL~sA~MHLk~~lK 175 (207)
.+...|.-+++..++
T Consensus 93 -------~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 93 -------GDLKKTIEYYQKSLT 107 (258)
T ss_dssp -------TCHHHHHHHHHHHHH
T ss_pred -------ccHHHHHHHHHHHHh
Confidence 234456666666665
No 43
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=61.17 E-value=22 Score=22.57 Aligned_cols=31 Identities=19% Similarity=0.225 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+++|-.++..+...|+++.|.....+.++.
T Consensus 42 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 42 NAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 3666777777777777777777666665553
No 44
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=61.14 E-value=28 Score=21.88 Aligned_cols=30 Identities=3% Similarity=-0.013 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
++.|-..+..+...|+++.|.+...+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 33 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKL 33 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 566777777778888888888888877764
No 45
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=60.49 E-value=34 Score=22.65 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=30.0
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSY 124 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRsl 124 (207)
.+..++.|-.++..+...|+++.|.+...+.+.-.
T Consensus 49 ~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 49 DPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 44458999999999999999999999998887743
No 46
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=60.35 E-value=63 Score=25.75 Aligned_cols=76 Identities=12% Similarity=-0.028 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|...+..+...|+++.|.+...+.++-....+- ....+.+-..|+.+|+.. .+...|.-+++..
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~------~~~~~~~~~~la~~~~~~-------g~~~~A~~~~~~a 329 (411)
T 4a1s_A 263 RRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGE------REVEAQSCYSLGNTYTLL-------HEFNTAIEYHNRH 329 (411)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHc-------CCHHHHHHHHHHH
Confidence 458889999999999999999999888876654321 112245555666777641 2344566666666
Q ss_pred HHhhcCCCC
Q 028535 174 LKQAEGFSD 182 (207)
Q Consensus 174 lKqae~F~e 182 (207)
++.+....+
T Consensus 330 l~~~~~~~~ 338 (411)
T 4a1s_A 330 LAIAQELGD 338 (411)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHCCC
Confidence 666553333
No 47
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=60.18 E-value=49 Score=24.37 Aligned_cols=32 Identities=9% Similarity=-0.011 Sum_probs=27.7
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
..+.+|-.++..+...|+++.|.+...+.++.
T Consensus 139 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 170 (252)
T 2ho1_A 139 ERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL 170 (252)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 34789999999999999999999998888764
No 48
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=59.99 E-value=50 Score=24.41 Aligned_cols=34 Identities=12% Similarity=0.247 Sum_probs=29.4
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+++|..+|..+...|+++.|.+...+.+.-
T Consensus 73 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 73 RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 3445899999999999999999999999988874
No 49
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=59.96 E-value=25 Score=21.96 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHHHHh-CChhhhHHHHHHHHhhhcc
Q 028535 93 SADMWGLYARWLKNK-GDLTMCSEALLKQVRSYQG 126 (207)
Q Consensus 93 ~~diWgLyAryh~~~-G~~~~a~EA~LKqVRslqg 126 (207)
.+.+|-.++..+..+ |+++.|.+...+.+....+
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 75 NKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp CHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 589999999999999 9999999999888875443
No 50
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=59.63 E-value=44 Score=23.67 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+.+|-.++..+...|+++.|.+...+.+..
T Consensus 113 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 113 YIANLNKGICSAKQGQFGLAEAYLKRSLAA 142 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 677777888888888888887777776653
No 51
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=59.59 E-value=28 Score=24.66 Aligned_cols=30 Identities=20% Similarity=0.139 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
++.|...+..+..+|+++.|.+...|.+.-
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISI 136 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHh
Confidence 677777777777777777777776666553
No 52
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=59.20 E-value=55 Score=24.66 Aligned_cols=67 Identities=13% Similarity=0.065 Sum_probs=48.4
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..+++|-.++..+...|+++.|.+...+.++-- . ++.+-..|+.+|+.. .+...|.-+
T Consensus 114 ~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------~-------~~~~~~~la~~~~~~-------g~~~~A~~~ 173 (217)
T 2pl2_A 114 NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE------D-------TPEIRSALAELYLSM-------GRLDEALAQ 173 (217)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------C-------CHHHHHHHHHHHHHH-------TCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc------c-------chHHHHHHHHHHHHc-------CCHHHHHHH
Confidence 44558999999999999999999999999988742 1 233445677777752 234466666
Q ss_pred hHHHHHh
Q 028535 170 LKNVLKQ 176 (207)
Q Consensus 170 Lk~~lKq 176 (207)
++..++.
T Consensus 174 ~~~al~~ 180 (217)
T 2pl2_A 174 YAKALEQ 180 (217)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7666654
No 53
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=58.49 E-value=32 Score=26.05 Aligned_cols=39 Identities=15% Similarity=-0.020 Sum_probs=27.6
Q ss_pred HHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 83 ILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 83 il~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
.+++.+.. +.++.|-.++..+...|+++.|.+...|.+.
T Consensus 8 ~~~~aa~~-g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 46 (212)
T 3rjv_A 8 QYQQQAEA-GDRRAQYYLADTWVSSGDYQKAEYWAQKAAA 46 (212)
T ss_dssp HHHHHHHT-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 34455543 3477777778888888888888888887765
No 54
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=58.38 E-value=8.2 Score=33.33 Aligned_cols=55 Identities=18% Similarity=0.297 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCcccc
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWK 131 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~k 131 (207)
+.....+-++++. .+..+++|-.|+++....|+++.|.+...|.|...-....|.
T Consensus 29 ~~a~~~~e~al~~---~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~~~lw~ 83 (530)
T 2ooe_A 29 DKARKTYERLVAQ---FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWK 83 (530)
T ss_dssp HHHHHHHHHHHTT---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCCCHHHHH
T ss_pred HHHHHHHHHHHHH---CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCChHHHH
Confidence 3344444444432 344489999999999999999999999999998765434443
No 55
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=57.90 E-value=37 Score=28.02 Aligned_cols=29 Identities=21% Similarity=0.248 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+-||=+||.+.-+.||+++|..-+-+++-
T Consensus 94 AKiwi~~AqFEiRqgnl~kARkILg~AiG 122 (161)
T 4h7y_A 94 AFVHISFAQFELSQGNVKKSKQLLQKAVE 122 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHhc
Confidence 78999999999999999998887766553
No 56
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=57.70 E-value=36 Score=22.05 Aligned_cols=33 Identities=15% Similarity=0.025 Sum_probs=28.8
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+..+.+|-.++..+...|+++.|.+...+.++-
T Consensus 81 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 81 PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 344899999999999999999999998887763
No 57
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=57.69 E-value=68 Score=25.26 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|..++..+...|+++.|.+...+.++--.. .+.+-..|..+|... .+...|.-+++..
T Consensus 247 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~------------~~~~~~~l~~~~~~~-------g~~~~A~~~~~~a 307 (365)
T 4eqf_A 247 YSLWNRLGATLANGDRSEEAVEAYTRALEIQPG------------FIRSRYNLGISCINL-------GAYREAVSNFLTA 307 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHH-------TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------------chHHHHHHHHHHHHC-------CCHHHHHHHHHHH
Confidence 555555555555555555555555555442111 123344455555542 2344677788887
Q ss_pred HHhhc
Q 028535 174 LKQAE 178 (207)
Q Consensus 174 lKqae 178 (207)
++...
T Consensus 308 l~~~~ 312 (365)
T 4eqf_A 308 LSLQR 312 (365)
T ss_dssp HHHHH
T ss_pred HHhCc
Confidence 77765
No 58
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=57.47 E-value=56 Score=24.24 Aligned_cols=31 Identities=6% Similarity=0.039 Sum_probs=23.7
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
..+++|-..+..+...|+++.|.+...+.+.
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 65 (272)
T 3u4t_A 35 NSPYIYNRRAVCYYELAKYDLAQKDIETYFS 65 (272)
T ss_dssp CCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3467788888888888888888887777776
No 59
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=57.44 E-value=34 Score=21.74 Aligned_cols=68 Identities=10% Similarity=0.002 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHH
Q 028535 76 LMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYME 152 (207)
Q Consensus 76 l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~e 152 (207)
-++.+.+.++ ..+..+.+|..++.-+...|+++.|.+...+.++-.... ....-++.+-..+..+|..
T Consensus 23 A~~~~~~al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~ 90 (111)
T 2l6j_A 23 AVHCYDQLIT---AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA------EHVAIRSKLQYRLELAQGA 90 (111)
T ss_dssp HHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST------TSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc------cHHHHHHHHHHHHHHHHHH
Confidence 3344444443 344458999999999999999999999999888743322 1112245555566666664
No 60
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=57.30 E-value=46 Score=23.16 Aligned_cols=88 Identities=16% Similarity=0.155 Sum_probs=57.2
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
-.+..+.+|.-.|.-+..+|+++.|++...|.+.--.. +...+..++.+-..|..+|... .++..|.-
T Consensus 37 ~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~-----~~~~~~~~a~~~~~lg~~~~~~-------~~~~~A~~ 104 (127)
T 4gcn_A 37 LDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE-----TRADYKLIAKAMSRAGNAFQKQ-------NDLSLAVQ 104 (127)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCCHHHHHHHHHHHHHHHHHT-------TCHHHHHH
T ss_pred hCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc-----cchhhHHHHHHHHHHHHHHHHc-------CCHHHHHH
Confidence 35555899999999999999999999999998873221 2223455666666666777642 34455665
Q ss_pred HhHHHHHhhcCCCCcHhHHHHHH
Q 028535 169 HLKNVLKQAEGFSDMEEFRDLHA 191 (207)
Q Consensus 169 HLk~~lKqae~F~ete~~k~L~a 191 (207)
..+..|+ -+++.+..+.|..
T Consensus 105 ~~~kal~---~~~~~~~~~~l~~ 124 (127)
T 4gcn_A 105 WFHRSLS---EFRDPELVKKVKE 124 (127)
T ss_dssp HHHHHHH---HSCCHHHHHHHHH
T ss_pred HHHHHHh---hCcCHHHHHHHHH
Confidence 5555443 3455555555543
No 61
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=57.05 E-value=37 Score=22.64 Aligned_cols=34 Identities=9% Similarity=-0.133 Sum_probs=29.7
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+..|-.++.-+..+|+++.|.+...+.++-
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 4445899999999999999999999999888873
No 62
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=56.90 E-value=37 Score=23.02 Aligned_cols=29 Identities=10% Similarity=-0.082 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|-.++..+...|+++.|.+...+.+.
T Consensus 81 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 81 IKGYYRRAASNMALGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45555555555555555555555544443
No 63
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=56.67 E-value=36 Score=21.71 Aligned_cols=29 Identities=10% Similarity=-0.009 Sum_probs=16.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|-.++..+...|+++.|.+...+.++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAIC 74 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHh
Confidence 45555555555555555555555555554
No 64
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=56.49 E-value=34 Score=24.16 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=30.3
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSY 124 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRsl 124 (207)
.+..+..|-.++.-+..+|+++.|.+...+.++-.
T Consensus 75 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 75 DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 44458999999999999999999999999888743
No 65
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=55.71 E-value=37 Score=21.62 Aligned_cols=30 Identities=7% Similarity=-0.104 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+..|-..+..+...|+++.|.+...+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 41 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIEL 41 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 567777778888888888888887777764
No 66
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=55.27 E-value=80 Score=25.37 Aligned_cols=90 Identities=9% Similarity=0.052 Sum_probs=54.5
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..+++|-..|..+...|+++.|.+.+.+.+..- + .++.+-..|..+|.. .|...+ .+.-.
T Consensus 196 ~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~--------p----~~~~~l~~l~~~~~~----~g~~~e--aa~~~ 257 (291)
T 3mkr_A 196 CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKD--------S----GHPETLINLVVLSQH----LGKPPE--VTNRY 257 (291)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------T----TCHHHHHHHHHHHHH----TTCCHH--HHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------C----CCHHHHHHHHHHHHH----cCCCHH--HHHHH
Confidence 45568999999999999999999999999988732 1 123344455555554 233333 34444
Q ss_pred hHHHHHhhcCCCCcHhHHHHHHHHHHHHHhh
Q 028535 170 LKNVLKQAEGFSDMEEFRDLHACLDELKTKL 200 (207)
Q Consensus 170 Lk~~lKqae~F~ete~~k~L~acL~Ev~~~~ 200 (207)
++.+++. -++.+...++..-..+.....
T Consensus 258 ~~~~~~~---~P~~~~~~d~~~~~~~fd~~~ 285 (291)
T 3mkr_A 258 LSQLKDA---HRSHPFIKEYRAKENDFDRLV 285 (291)
T ss_dssp HHHHHHH---CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh---CCCChHHHHHHHHHHHHHHHH
Confidence 4444433 355555555544444444333
No 67
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=54.92 E-value=63 Score=24.03 Aligned_cols=76 Identities=13% Similarity=-0.006 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|...+..+...|+++.|.+...+.+.-....+- -...+.+-..++.+|+.. .+...|.-+++..
T Consensus 223 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~------~~~~~~~~~~la~~~~~~-------g~~~~A~~~~~~a 289 (338)
T 3ro2_A 223 RRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD------RAVEAQSCYSLGNTYTLL-------QDYEKAIDYHLKH 289 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcc------hhHHHHHHHHHHHHHHHh-------cCHHHHHHHHHHH
Confidence 458888999999999999999988888765544321 112244555666777652 3444677777777
Q ss_pred HHhhcCCCC
Q 028535 174 LKQAEGFSD 182 (207)
Q Consensus 174 lKqae~F~e 182 (207)
++......+
T Consensus 290 ~~~~~~~~~ 298 (338)
T 3ro2_A 290 LAIAQELKD 298 (338)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHhcCC
Confidence 776654444
No 68
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=54.44 E-value=34 Score=22.49 Aligned_cols=51 Identities=10% Similarity=0.023 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhc
Q 028535 75 HLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQ 125 (207)
Q Consensus 75 ~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslq 125 (207)
.-++.+.++++.--++...++.|-..+..+...|+++.|.+...+.+....
T Consensus 57 ~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 57 LAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 344444454442222222278899999999999999999999888887543
No 69
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=54.30 E-value=1.1e+02 Score=26.59 Aligned_cols=33 Identities=6% Similarity=-0.058 Sum_probs=27.0
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+..++.|..++..+...|+++.|.+...+.+.-
T Consensus 54 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 86 (568)
T 2vsy_A 54 PGHPEAVARLGRVRWTQQRHAEAAVLLQQASDA 86 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 344788888999999999999998888887764
No 70
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.81 E-value=45 Score=22.08 Aligned_cols=34 Identities=15% Similarity=0.044 Sum_probs=29.0
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+++|-.++..+...|+++.|.+...+.++-
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 3344899999999999999999999998887763
No 71
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=53.80 E-value=76 Score=24.65 Aligned_cols=68 Identities=12% Similarity=0.063 Sum_probs=45.8
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..+++|...+..+...|+++.|.+...+.+..-.. .+.+-..|+.+|... .+...|.-+
T Consensus 94 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~------------~~~~~~~l~~~~~~~-------g~~~~A~~~ 154 (368)
T 1fch_A 94 DPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPD------------NQTALMALAVSFTNE-------SLQRQACEI 154 (368)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC------------CHHHHHHHHHHHHHc-------CCHHHHHHH
Confidence 3345899999999999999999999999888764211 234455566666641 233355555
Q ss_pred hHHHHHh
Q 028535 170 LKNVLKQ 176 (207)
Q Consensus 170 Lk~~lKq 176 (207)
++..++.
T Consensus 155 ~~~~~~~ 161 (368)
T 1fch_A 155 LRDWLRY 161 (368)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 5555554
No 72
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=53.48 E-value=40 Score=21.38 Aligned_cols=67 Identities=7% Similarity=-0.048 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
++.|-..+.-+...|+++.|.+...+.++-.... +.+-..++.+|+.. .+...|.-+++..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------------~~~~~~lg~~~~~~-------g~~~~A~~~~~~a 64 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN------------PVGYSNKAMALIKL-------GEYTQAIQMCQQG 64 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC------------HHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------------HHHHHHHHHHHHHh-------cCHHHHHHHHHHH
Confidence 6788899999999999999999999998753221 34455677777752 2344677677766
Q ss_pred HHhhcC
Q 028535 174 LKQAEG 179 (207)
Q Consensus 174 lKqae~ 179 (207)
++....
T Consensus 65 l~~~p~ 70 (111)
T 2l6j_A 65 LRYTST 70 (111)
T ss_dssp HTSCSS
T ss_pred HHhCCC
Confidence 655433
No 73
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=53.42 E-value=72 Score=24.24 Aligned_cols=47 Identities=9% Similarity=-0.025 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+.-++.+.++++ ..+..+++|...+..+...|+++.|.+...+.+..
T Consensus 20 ~~A~~~~~~~l~---~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 66 (359)
T 3ieg_A 20 ADALSQFHAAVD---GDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIAL 66 (359)
T ss_dssp HHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh---hCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 334444445444 24445899999999999999999999999888764
No 74
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=53.38 E-value=45 Score=21.88 Aligned_cols=96 Identities=11% Similarity=-0.056 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHhccch---hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHH
Q 028535 75 HLMEFLGKILQQVVRSESS---ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYM 151 (207)
Q Consensus 75 ~l~e~~Gkil~qiv~S~~~---~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ 151 (207)
.-++.+-+.+....+.+.. +.+|...+..+...|+++.|.+...+.++-....+.. ...+.+...|+.+|+
T Consensus 27 ~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~------~~~~~~~~~l~~~~~ 100 (164)
T 3ro3_A 27 DAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR------AVEAQSCYSLGNTYT 100 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHHHHHHH
Confidence 3344444444443333221 4688899999999999999999999988866554321 223455566777776
Q ss_pred HHhcCCCcchhhHHHHHHhHHHHHhhcCCCCc
Q 028535 152 EISSSSGSRRELFAAEMHLKNVLKQAEGFSDM 183 (207)
Q Consensus 152 ei~s~~G~~reL~sA~MHLk~~lKqae~F~et 183 (207)
.. .+.-.|.-+++..++.++...+.
T Consensus 101 ~~-------~~~~~A~~~~~~a~~~~~~~~~~ 125 (164)
T 3ro3_A 101 LL-------QDYEKAIDYHLKHLAIAQELKDR 125 (164)
T ss_dssp HT-------TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HH-------hhHHHHHHHHHHHHHHHHHccch
Confidence 52 33446777777777766544443
No 75
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=53.17 E-value=55 Score=28.77 Aligned_cols=47 Identities=11% Similarity=0.091 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 74 EHLMEFLGKILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+.-++.+-+.++ ..+..++.|..+|.-+..+|+++.|.+...+.++-
T Consensus 23 ~~A~~~~~~Al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 69 (477)
T 1wao_1 23 ENAIKFYSQAIE---LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL 69 (477)
T ss_dssp HHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH---hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 334444444444 34555899999999999999999999999998874
No 76
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=52.83 E-value=64 Score=23.53 Aligned_cols=75 Identities=15% Similarity=0.051 Sum_probs=48.8
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.+.+|...+..+...|+++.|.+...+.++-.+...-..+ ...+.+-..|+.+|... .+...|.-.++.
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~~~l~~~~~~~-------g~~~~A~~~~~~ 110 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDH----PAVAATLNNLAVLYGKR-------GKYKEAEPLCKR 110 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC----HHHHHHHHHHHHHHHTT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcc----hHHHHHHHHHHHHHHHh-------ccHHHHHHHHHH
Confidence 3799999999999999999999999998876533211111 23445556666777641 233355555555
Q ss_pred HHHhhc
Q 028535 173 VLKQAE 178 (207)
Q Consensus 173 ~lKqae 178 (207)
.++.++
T Consensus 111 al~~~~ 116 (283)
T 3edt_B 111 ALEIRE 116 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 77
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=52.69 E-value=83 Score=27.22 Aligned_cols=49 Identities=22% Similarity=0.114 Sum_probs=36.8
Q ss_pred chhhHHHHHHHHHHHhCCh-hhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHH
Q 028535 92 SSADMWGLYARWLKNKGDL-TMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYME 152 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~-~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~e 152 (207)
..+++|-..++.+...|++ +.|.+...+.++--.. ++.+-..|..+|+.
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~------------~~~a~~~lg~~~~~ 149 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE------------LVEAWNQLGEVYWK 149 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC------------CHHHHHHHHHHHHH
Confidence 3489999999999999999 9999999988874221 23445556666664
No 78
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=52.63 E-value=58 Score=22.98 Aligned_cols=88 Identities=11% Similarity=-0.023 Sum_probs=62.9
Q ss_pred cchhhHHHHHHHH-HHHhCCh--hhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHH
Q 028535 91 ESSADMWGLYARW-LKNKGDL--TMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAE 167 (207)
Q Consensus 91 ~~~~diWgLyAry-h~~~G~~--~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~ 167 (207)
+..+++|-.++.. +...|++ +.|.+...+.++--.. ...+-..|+.+|+.. .+...|.
T Consensus 75 p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~------------~~~~~~~la~~~~~~-------g~~~~A~ 135 (177)
T 2e2e_A 75 GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSN------------EITALMLLASDAFMQ-------ANYAQAI 135 (177)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCC------------cHHHHHHHHHHHHHc-------ccHHHHH
Confidence 3458999999999 8899999 9999998888874221 235677788888872 4556788
Q ss_pred HHhHHHHHhhcCCCCcHhHHHHHHHHHHHHHhh
Q 028535 168 MHLKNVLKQAEGFSDMEEFRDLHACLDELKTKL 200 (207)
Q Consensus 168 MHLk~~lKqae~F~ete~~k~L~acL~Ev~~~~ 200 (207)
-+++.+++.. ++.+....+...+.+.+.+.
T Consensus 136 ~~~~~al~~~---p~~~~~~~~~~~i~~~~~~~ 165 (177)
T 2e2e_A 136 ELWQKVMDLN---SPRINRTQLVESINMAKLLQ 165 (177)
T ss_dssp HHHHHHHHTC---CTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhC---CCCccHHHHHHHHHHHHHhc
Confidence 8888877654 33344556677777666554
No 79
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=52.56 E-value=67 Score=23.63 Aligned_cols=58 Identities=7% Similarity=0.002 Sum_probs=42.5
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYME 152 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~e 152 (207)
.+..+++|-.++.-+...|+++.|.+...+.+.-.. ++..-+..++.+-..+..+|+.
T Consensus 72 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~~g~~~~~ 129 (228)
T 4i17_A 72 NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVP-----GNATIEKLYAIYYLKEGQKFQQ 129 (228)
T ss_dssp TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-----TCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-----CcHHHHHHHHHHHHHHhHHHHH
Confidence 344589999999999999999999999998887443 2334455555666666666653
No 80
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=52.07 E-value=52 Score=22.26 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|-.++..+...|+++.|.+...+.++
T Consensus 110 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 138 (186)
T 3as5_A 110 FNVRFRLGVALDNLGRFDEAIDSFKIALG 138 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 55566666666666666666665555554
No 81
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=51.78 E-value=93 Score=25.06 Aligned_cols=75 Identities=9% Similarity=0.044 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
..+..+.+.++...|+++.|.+...+.+.-....+= .| -.+.....|+++|.+. .+...|.-.++.+
T Consensus 95 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-----~~-~~~~~~~~la~~~~~~-------g~~~~A~~~l~~~ 161 (434)
T 4b4t_Q 95 KVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR-----VF-LKHSLSIKLATLHYQK-------KQYKDSLALINDL 161 (434)
T ss_dssp HHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC-----CS-SHHHHHHHHHHHHHHH-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc-----cH-HHHHHHHHHHHHHHHc-------cChHHHHHHHHHH
Confidence 467777888888889988888877776654433211 11 1355667788888862 2344566666666
Q ss_pred HHhhcCCC
Q 028535 174 LKQAEGFS 181 (207)
Q Consensus 174 lKqae~F~ 181 (207)
++......
T Consensus 162 ~~~~~~~~ 169 (434)
T 4b4t_Q 162 LREFKKLD 169 (434)
T ss_dssp HHHHTTSS
T ss_pred HHHHHhcc
Confidence 66554333
No 82
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=51.20 E-value=48 Score=23.16 Aligned_cols=33 Identities=9% Similarity=-0.035 Sum_probs=29.3
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
.+..++.|-..+.-+..+|+++.|.+...|.++
T Consensus 77 ~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 77 DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQ 109 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 444589999999999999999999999988876
No 83
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=50.76 E-value=30 Score=24.95 Aligned_cols=40 Identities=15% Similarity=0.073 Sum_probs=32.4
Q ss_pred HHHHH-hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 84 LQQVV-RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 84 l~qiv-~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+++++ ..+..+++|-.++......|+++.|.+...+.++.
T Consensus 97 ~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 97 LEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 34444 34455899999999999999999999999988873
No 84
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=50.42 E-value=41 Score=20.58 Aligned_cols=65 Identities=18% Similarity=0.122 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.++.|...+..+...|+++.|.+...+.++.... ...+-..|..+|+.. .+...|.-+++.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~------------~~~~~~~l~~~~~~~-------~~~~~A~~~~~~ 68 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN------------NAEAWYNLGNAYYKQ-------GDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC------------CHHHHHHHHHHHHHH-------hhHHHHHHHHHH
Confidence 3788999999999999999999999998874221 123445666777652 345567777777
Q ss_pred HHHh
Q 028535 173 VLKQ 176 (207)
Q Consensus 173 ~lKq 176 (207)
.++.
T Consensus 69 a~~~ 72 (91)
T 1na3_A 69 ALEL 72 (91)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7665
No 85
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=49.83 E-value=78 Score=23.63 Aligned_cols=74 Identities=19% Similarity=0.157 Sum_probs=50.9
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.+.+|..++..+...|+++.|.+...+.+..++......+. ..+.+-..|+.+|+.. .+.-.|.-+++.
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~----~~~~~~~~la~~~~~~-------g~~~~A~~~~~~ 220 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDP----NVAKTKNNLASCYLKQ-------GKFKQAETLYKE 220 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCH----HHHHHHHHHHHHHHHH-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHHHHc-------CCHHHHHHHHHH
Confidence 37889999999999999999999999988865543222222 2345556677777752 234466667776
Q ss_pred HHHhh
Q 028535 173 VLKQA 177 (207)
Q Consensus 173 ~lKqa 177 (207)
.++.+
T Consensus 221 al~~~ 225 (311)
T 3nf1_A 221 ILTRA 225 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 86
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=49.69 E-value=77 Score=25.17 Aligned_cols=35 Identities=9% Similarity=-0.097 Sum_probs=30.2
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
..+..+.+|..+|.-+..+|+++.|.+...+.++-
T Consensus 33 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 33 RNPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 34455899999999999999999999999888763
No 87
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=49.00 E-value=55 Score=22.71 Aligned_cols=36 Identities=11% Similarity=-0.098 Sum_probs=30.5
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhh
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSY 124 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRsl 124 (207)
..+..+++|-.++..+..+|+++.|.+...+.++-.
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 344558999999999999999999999998887644
No 88
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=48.97 E-value=67 Score=22.63 Aligned_cols=35 Identities=11% Similarity=0.044 Sum_probs=30.0
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
..+..+.+|...+......|+++.|.+...+.+.-
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~ 102 (184)
T 3vtx_A 68 LDTTSAEAYYILGSANFMIDEKQAAIDALQRAIAL 102 (184)
T ss_dssp HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34455899999999999999999999999888764
No 89
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=48.58 E-value=48 Score=20.85 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+..|-..+.-+...|+++.|.+...+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 38 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 38 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 678888888889999999999988888764
No 90
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=48.57 E-value=50 Score=21.06 Aligned_cols=48 Identities=8% Similarity=-0.008 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhccch----hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 75 HLMEFLGKILQQVVRSESS----ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 75 ~l~e~~Gkil~qiv~S~~~----~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
.-+..+-++++.--.++.. +.+|-.++..+...|+++.|.+...+.++
T Consensus 56 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 56 KCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3444455555443332222 78899999999999999999999888776
No 91
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=48.46 E-value=41 Score=26.71 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=29.1
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+..+++|-.|+++....|+++.|.....+.+..
T Consensus 200 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 200 GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 344899999999999999999999999988873
No 92
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=47.76 E-value=70 Score=22.50 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHHHHhcc---chhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHH
Q 028535 74 EHLMEFLGKILQQVVRSE---SSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVY 150 (207)
Q Consensus 74 e~l~e~~Gkil~qiv~S~---~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY 150 (207)
+.-.+.+-+.+.-....+ ..+.+|...+..+...|+++.|.+...+.++-++..+- .....+.+-..|+.+|
T Consensus 43 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----~~~~~~~~~~~lg~~~ 117 (203)
T 3gw4_A 43 DEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPE-----DPLAASANAYEVATVA 117 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCc-----cHHHHHHHHHHHHHHH
Confidence 334445555555433332 22678888999999999999999999998887664331 1123345555666666
Q ss_pred HHHhcCCCcchhhHHHHHHhHHHHHhhcCCCC
Q 028535 151 MEISSSSGSRRELFAAEMHLKNVLKQAEGFSD 182 (207)
Q Consensus 151 ~ei~s~~G~~reL~sA~MHLk~~lKqae~F~e 182 (207)
+.. .+...|.-+++..++.++...+
T Consensus 118 ~~~-------g~~~~A~~~~~~al~~~~~~~~ 142 (203)
T 3gw4_A 118 LHF-------GDLAGARQEYEKSLVYAQQADD 142 (203)
T ss_dssp HHH-------TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHh-------CCHHHHHHHHHHHHHHHHhccc
Confidence 642 2334566666666655543333
No 93
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=47.73 E-value=99 Score=29.40 Aligned_cols=34 Identities=12% Similarity=0.134 Sum_probs=30.2
Q ss_pred hhhHHHHHHHHHHHhCChhhhH-HHHHHHHhhhcc
Q 028535 93 SADMWGLYARWLKNKGDLTMCS-EALLKQVRSYQG 126 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~-EA~LKqVRslqg 126 (207)
.+++|-.||+|....|+.+.|. +.+-++++.+-.
T Consensus 342 ~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~ 376 (679)
T 4e6h_A 342 APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPN 376 (679)
T ss_dssp CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCC
Confidence 4999999999999999999997 888888887654
No 94
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=46.90 E-value=64 Score=21.79 Aligned_cols=34 Identities=9% Similarity=-0.048 Sum_probs=30.0
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+++|-.++..+...|+++.|.+...+.++.
T Consensus 43 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 43 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL 76 (166)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4445899999999999999999999999998875
No 95
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=46.25 E-value=85 Score=27.27 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=29.1
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..++.|..+|..+...|+++.|.+...+.++-
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 52 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLAL 52 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3445899999999999999999999999998874
No 96
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=46.21 E-value=1.4e+02 Score=25.34 Aligned_cols=84 Identities=14% Similarity=0.041 Sum_probs=57.5
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.+.+|..+|.-+..+|+++.|.+...+.+.- +. ..+.+-..++.+|+.. .+...|.-+++.
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~--------~p----~~~~a~~~lg~~~~~~-------g~~~eA~~~l~~ 332 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEI--------DP----SNTKALYRRAQGWQGL-------KEYDQALADLKK 332 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CT----TCHHHHHHHHHHHHHT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHh--------Cc----hhHHHHHHHHHHHHHc-------cCHHHHHHHHHH
Confidence 3789999999999999999999999988873 12 2345566777778762 345578777777
Q ss_pred HHHhhcCCCCcHhHHHHHHHHHHHH
Q 028535 173 VLKQAEGFSDMEEFRDLHACLDELK 197 (207)
Q Consensus 173 ~lKqae~F~ete~~k~L~acL~Ev~ 197 (207)
.++..- .+.+.+..|..++....
T Consensus 333 Al~l~P--~~~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 333 AQEIAP--EDKAIQAELLKVKQKIK 355 (370)
T ss_dssp HHHHCT--TCHHHHHHHHHHHHHHH
T ss_pred HHHhCC--CCHHHHHHHHHHHHHHH
Confidence 776642 23444555555554443
No 97
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=45.81 E-value=1.4e+02 Score=25.86 Aligned_cols=71 Identities=6% Similarity=-0.132 Sum_probs=46.6
Q ss_pred ccchhhHHHHHHHHHHHh--------CChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcch
Q 028535 90 SESSADMWGLYARWLKNK--------GDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRR 161 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~--------G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~r 161 (207)
.+..++.|..++..+... |+++.|.++..+.++--.. -...+.+-..|+.+|... .
T Consensus 209 ~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~~~~lg~~~~~~-------g 272 (474)
T 4abn_A 209 DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK---------ASSNPDLHLNRATLHKYE-------E 272 (474)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG---------GGGCHHHHHHHHHHHHHT-------T
T ss_pred CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC---------cccCHHHHHHHHHHHHHc-------C
Confidence 444589999999999999 9999999999999884210 001234445566666641 2
Q ss_pred hhHHHHHHhHHHHHh
Q 028535 162 ELFAAEMHLKNVLKQ 176 (207)
Q Consensus 162 eL~sA~MHLk~~lKq 176 (207)
+...|.-+++..++.
T Consensus 273 ~~~~A~~~~~~al~l 287 (474)
T 4abn_A 273 SYGEALEGFSQAAAL 287 (474)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 333566566555544
No 98
>1mr1_C SKI oncogene, SKI, C-SKI; SMAD, cancer, TGF-B signaling, protein interaction, signaling protein; 2.85A {Homo sapiens} SCOP: d.217.1.2
Probab=45.67 E-value=11 Score=29.00 Aligned_cols=32 Identities=25% Similarity=0.496 Sum_probs=26.1
Q ss_pred hHHHHHhhcCCCCcHhHHHHHHHHHHHHHhhc
Q 028535 170 LKNVLKQAEGFSDMEEFRDLHACLDELKTKLQ 201 (207)
Q Consensus 170 Lk~~lKqae~F~ete~~k~L~acL~Ev~~~~~ 201 (207)
=+.-|+.+.+.+++++..+|+.+|+||+.+..
T Consensus 67 Wr~yl~l~~~~~~~~~~~~l~~~l~~~k~~f~ 98 (99)
T 1mr1_C 67 WRAYILLSQDYTGKEEQARLGRCLDDVKEKFD 98 (99)
T ss_dssp HHHHCEECTTCCCTTHHHHHHHHHHHHHHHCC
T ss_pred cceeEEcccCCCCcchhHHHHHHHHHHHHHhC
Confidence 34455567799999999999999999998753
No 99
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=44.97 E-value=51 Score=24.49 Aligned_cols=34 Identities=26% Similarity=0.542 Sum_probs=26.4
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+++|...+..+...|+++.|.+...+.+.-
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 104 DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 3444788888888888888888888888776653
No 100
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=44.74 E-value=90 Score=22.89 Aligned_cols=66 Identities=8% Similarity=-0.004 Sum_probs=44.9
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhH
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLK 171 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk 171 (207)
..+.+|-..+..+...|+++.|.+...+.++-- +. ++.+-..|+.+|... .+...|.-+++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--------p~----~~~~~~~l~~~~~~~-------~~~~~A~~~~~ 100 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN--------YN----LANAYIGKSAAYRDM-------KNNQEYIATLT 100 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT--------CS----HHHHHHHHHHHHHHT-------TCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC--------cc----hHHHHHHHHHHHHHc-------ccHHHHHHHHH
Confidence 447888889999999999999999999988521 11 345556677777652 23335555555
Q ss_pred HHHHh
Q 028535 172 NVLKQ 176 (207)
Q Consensus 172 ~~lKq 176 (207)
..++.
T Consensus 101 ~al~~ 105 (228)
T 4i17_A 101 EGIKA 105 (228)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 101
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=44.22 E-value=97 Score=23.09 Aligned_cols=34 Identities=9% Similarity=0.013 Sum_probs=29.1
Q ss_pred ccchhhHHHH----------------HHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGL----------------YARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgL----------------yAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..++.|-. .+.-+...|+++.|.+...+.++-
T Consensus 34 ~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 34 NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4444788888 999999999999999999998873
No 102
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=43.85 E-value=1.2e+02 Score=24.42 Aligned_cols=68 Identities=21% Similarity=0.142 Sum_probs=48.0
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHH
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMH 169 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MH 169 (207)
.+..+..|-..+..+...|+++.|.+...+.++.-. ..+.+-..|..+|... .+...|.-.
T Consensus 56 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p------------~~~~~~~~l~~~~~~~-------g~~~~A~~~ 116 (450)
T 2y4t_A 56 DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKM------------DFTAARLQRGHLLLKQ-------GKLDEAEDD 116 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT------------TCHHHHHHHHHHHHHT-------TCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC------------CcHHHHHHHHHHHHHc-------CCHHHHHHH
Confidence 334488999999999999999999998888876421 1245566677777762 345577777
Q ss_pred hHHHHHh
Q 028535 170 LKNVLKQ 176 (207)
Q Consensus 170 Lk~~lKq 176 (207)
++.+++.
T Consensus 117 ~~~~~~~ 123 (450)
T 2y4t_A 117 FKKVLKS 123 (450)
T ss_dssp HHHHHTS
T ss_pred HHHHHhc
Confidence 7776654
No 103
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=43.69 E-value=85 Score=23.75 Aligned_cols=87 Identities=10% Similarity=0.007 Sum_probs=59.2
Q ss_pred HHHHhccchhhHHHHHHHHHHH----hCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 028535 85 QQVVRSESSADMWGLYARWLKN----KGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSR 160 (207)
Q Consensus 85 ~qiv~S~~~~diWgLyAryh~~----~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~ 160 (207)
++++. ...++.|-..+..+.. .|+++.|.+...|.+.. ..+.+-..|..+|.. +.|..
T Consensus 30 ~~a~~-~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--------------~~~~a~~~lg~~~~~---g~~~~ 91 (273)
T 1ouv_A 30 EKACD-LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--------------NYSNGCHLLGNLYYS---GQGVS 91 (273)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------------TCHHHHHHHHHHHHH---TSSSC
T ss_pred HHHHH-CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHhC---CCCcc
Confidence 34443 3447788888888888 89999998888887763 145667777888876 34667
Q ss_pred hhhHHHHHHhHHHHHhhcCCCCcHhHHHHHHHH
Q 028535 161 RELFAAEMHLKNVLKQAEGFSDMEEFRDLHACL 193 (207)
Q Consensus 161 reL~sA~MHLk~~lKqae~F~ete~~k~L~acL 193 (207)
.+...|.-+++..++.. +.+.+-.|-.++
T Consensus 92 ~~~~~A~~~~~~a~~~~----~~~a~~~lg~~~ 120 (273)
T 1ouv_A 92 QNTNKALQYYSKACDLK----YAEGCASLGGIY 120 (273)
T ss_dssp CCHHHHHHHHHHHHHTT----CHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcC----CccHHHHHHHHH
Confidence 77778888888776652 444444444443
No 104
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=43.63 E-value=1.2e+02 Score=23.87 Aligned_cols=34 Identities=12% Similarity=0.146 Sum_probs=29.8
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+++|-.++..+...|+++.|.+...+.+.-
T Consensus 95 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 128 (365)
T 4eqf_A 95 DPGDAEAWQFLGITQAENENEQAAIVALQRCLEL 128 (365)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 4445899999999999999999999999888764
No 105
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=43.56 E-value=40 Score=23.35 Aligned_cols=34 Identities=9% Similarity=-0.047 Sum_probs=29.2
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
..+..++.|-.++..+...|+++.|.+...+.++
T Consensus 80 l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 80 LDPKDIAVHAALAVSHTNEHNANAALASLRAWLL 113 (121)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3445589999999999999999999999888775
No 106
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=43.55 E-value=83 Score=22.11 Aligned_cols=77 Identities=8% Similarity=-0.121 Sum_probs=56.9
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.+.+|...+..+...|+++.|.+...+.+.-.+..+-. ...+.+-..|+.+|... .+...|.-+++.
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~~~~~~~l~~~~~~~-------g~~~~A~~~~~~ 91 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDH------TAEHRALHQVGMVERMA-------GNWDAARRCFLE 91 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCH------HHHHHHHHHHHHHHHHT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCc------HHHHHHHHHHHHHHHHc-------CCHHHHHHHHHH
Confidence 48999999999999999999999999998877665432 23455666677777752 344567777777
Q ss_pred HHHhhcCCCC
Q 028535 173 VLKQAEGFSD 182 (207)
Q Consensus 173 ~lKqae~F~e 182 (207)
.++.++.+++
T Consensus 92 al~~~~~~~~ 101 (203)
T 3gw4_A 92 ERELLASLPE 101 (203)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHHcCc
Confidence 7777765553
No 107
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=43.30 E-value=1.2e+02 Score=25.08 Aligned_cols=38 Identities=8% Similarity=-0.155 Sum_probs=30.8
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccC
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGS 127 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS 127 (207)
.+..+++|-.++..+...|+++.|.+...+.+.--...
T Consensus 458 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 495 (537)
T 3fp2_A 458 DPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILARTM 495 (537)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--C
T ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc
Confidence 44458999999999999999999999998888754443
No 108
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=43.20 E-value=64 Score=23.93 Aligned_cols=37 Identities=3% Similarity=-0.202 Sum_probs=32.1
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhc
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQ 125 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslq 125 (207)
-.+..++.|-..+.-+..+|+++.|.++..+.++--.
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~ 135 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSN 135 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4555689999999999999999999999999988543
No 109
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=43.18 E-value=82 Score=27.00 Aligned_cols=45 Identities=20% Similarity=0.337 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHH-------hCChh-------hhHHHHHHHHhh
Q 028535 76 LMEFLGKILQQVVRSESSADMWGLYARWLKN-------KGDLT-------MCSEALLKQVRS 123 (207)
Q Consensus 76 l~e~~Gkil~qiv~S~~~~diWgLyAryh~~-------~G~~~-------~a~EA~LKqVRs 123 (207)
+...+-+.+.. .+..+++|-.|+.|... .|+++ .|.+...+.++.
T Consensus 257 a~~~y~~al~~---~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~ 315 (530)
T 2ooe_A 257 VMFAYEQCLLV---LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST 315 (530)
T ss_dssp HHHHHHHHHHH---HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHh---CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence 34444444443 23349999999999986 79987 889998888874
No 110
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=43.04 E-value=94 Score=22.62 Aligned_cols=76 Identities=8% Similarity=-0.073 Sum_probs=52.7
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhH
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLK 171 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk 171 (207)
..+.+|..++..+...|+++.|.+...+.+.-++...-..+. ..+.+-..|+.+|... .+.-.|.-+++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~----~~~~~~~~la~~~~~~-------g~~~~A~~~~~ 151 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHP----DVAKQLNNLALLCQNQ-------GKAEEVEYYYR 151 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHHHTT-------TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCCh----HHHHHHHHHHHHHHHc-------CCHHHHHHHHH
Confidence 337899999999999999999999999988765433222222 3345556667777642 34446777777
Q ss_pred HHHHhhc
Q 028535 172 NVLKQAE 178 (207)
Q Consensus 172 ~~lKqae 178 (207)
..++..+
T Consensus 152 ~al~~~~ 158 (283)
T 3edt_B 152 RALEIYA 158 (283)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 111
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=42.55 E-value=91 Score=22.32 Aligned_cols=33 Identities=18% Similarity=0.061 Sum_probs=27.7
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
.+..++.|-.++..+...|+++.|.+...+.++
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~ 68 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPL 68 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCG
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhh
Confidence 344589999999999999999999988776544
No 112
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=42.50 E-value=95 Score=25.53 Aligned_cols=59 Identities=7% Similarity=0.079 Sum_probs=40.8
Q ss_pred HHHHhccchhhHHHHHHHHHHHhCCh------hhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHH
Q 028535 85 QQVVRSESSADMWGLYARWLKNKGDL------TMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELC 147 (207)
Q Consensus 85 ~qiv~S~~~~diWgLyAryh~~~G~~------~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc 147 (207)
.||+=++-++|.|=.|.+--...|+. +.-.|..-+++..+.-+ + ....++|+.-=..++
T Consensus 4 ~~~~~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~---k-~~~wrrYI~LWIrYA 68 (161)
T 4h7y_A 4 GSIMMMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPD---K-YGQNESFARIQVRFA 68 (161)
T ss_dssp ------CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGG---G-GTTCHHHHHHHHHHH
T ss_pred cceeeCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCcc---c-cccHHHHHHHHHHHH
Confidence 45454666699999999999999999 88888888888887776 2 345667766444444
No 113
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=42.46 E-value=74 Score=22.73 Aligned_cols=37 Identities=14% Similarity=0.010 Sum_probs=31.0
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhc
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQ 125 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslq 125 (207)
..+..++.|-..+.-+..+|+++.|.+...+.++-..
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 3455589999999999999999999999988877443
No 114
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=42.04 E-value=95 Score=22.35 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+++|-.++..+...|+++.|.+...+.+..
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 154 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVEL 154 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3667777777777777777777766666553
No 115
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=41.86 E-value=1.1e+02 Score=22.88 Aligned_cols=74 Identities=14% Similarity=0.033 Sum_probs=48.1
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.+.+|...+..+...|+++.|.+...+.++-.+...-..+ ...+.+-..|+.+|... .+...|.-+++.
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~----~~~~~~~~~l~~~~~~~-------g~~~~A~~~~~~ 136 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDH----PAVAATLNNLAVLYGKR-------GKYKEAEPLCKR 136 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHHHHHTT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC----hHHHHHHHHHHHHHHHc-------CcHHHHHHHHHH
Confidence 3789999999999999999999999988876533211111 23445555666666641 233455556665
Q ss_pred HHHhh
Q 028535 173 VLKQA 177 (207)
Q Consensus 173 ~lKqa 177 (207)
.++..
T Consensus 137 a~~~~ 141 (311)
T 3nf1_A 137 ALEIR 141 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 116
>4i0x_A ESAT-6-like protein MAB_3112; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=41.85 E-value=87 Score=21.86 Aligned_cols=44 Identities=11% Similarity=-0.019 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHH
Q 028535 95 DMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSY 141 (207)
Q Consensus 95 diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~ 141 (207)
+|-..-+++....+++..-.+.+-..|..|+ ++|... .+..|..
T Consensus 4 el~~~a~~~~~~~~~i~~~l~~l~~~v~~l~-~~W~G~--Aa~af~~ 47 (94)
T 4i0x_A 4 EVGALSKFAASLADQMRAGSNSLDRDVQSLF-GVWKGS--AADAYRS 47 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG-GTCCSH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccchH--HHHHHHH
Confidence 5566677888888999999999999999999 568875 3444444
No 117
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=41.78 E-value=1.2e+02 Score=23.49 Aligned_cols=17 Identities=18% Similarity=0.087 Sum_probs=10.8
Q ss_pred hhHHHHHHhHHHHHhhc
Q 028535 162 ELFAAEMHLKNVLKQAE 178 (207)
Q Consensus 162 eL~sA~MHLk~~lKqae 178 (207)
+...|.-+++..++...
T Consensus 300 ~~~~A~~~~~~al~~~~ 316 (368)
T 1fch_A 300 AHREAVEHFLEALNMQR 316 (368)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC
Confidence 34467777777776654
No 118
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=41.67 E-value=18 Score=29.73 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHH-hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 76 LMEFLGKILQQVV-RSESSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 76 l~e~~Gkil~qiv-~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
....+-+++.+.. ..+..++.|...+..+..+|+++.|.+...|+++
T Consensus 411 ~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe 458 (472)
T 4g1t_A 411 MKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLE 458 (472)
T ss_dssp HHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4444455555554 3444589999999999999999999999999886
No 119
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=41.39 E-value=68 Score=25.81 Aligned_cols=29 Identities=7% Similarity=-0.048 Sum_probs=22.4
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHH
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLK 119 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LK 119 (207)
+..+++|-+.|......|+++.|.+...+
T Consensus 98 P~~~~~~~~la~~~~~~g~~~~Al~~l~~ 126 (291)
T 3mkr_A 98 VTNTTFLLMAASIYFYDQNPDAALRTLHQ 126 (291)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHhC
Confidence 34578888888888888888888876655
No 120
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=41.13 E-value=90 Score=21.85 Aligned_cols=66 Identities=20% Similarity=0.203 Sum_probs=47.3
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.+.+|...|.-+..+|+++.|.+...+.++- + +. ++.+-..+..+|+.. .+...|.-.++.
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~-~-------p~----~~~a~~~~g~~~~~~-------g~~~~A~~~~~~ 122 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKR-E-------ET----NEKALFRRAKARIAA-------WKLDEAEEDLKL 122 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-S-------TT----CHHHHHHHHHHHHHT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc-C-------Cc----chHHHHHHHHHHHHH-------hcHHHHHHHHHH
Confidence 3689999999999999999999999988874 2 21 234555667777752 344467777777
Q ss_pred HHHhh
Q 028535 173 VLKQA 177 (207)
Q Consensus 173 ~lKqa 177 (207)
.++..
T Consensus 123 al~l~ 127 (162)
T 3rkv_A 123 LLRNH 127 (162)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 66653
No 121
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=40.03 E-value=1e+02 Score=22.29 Aligned_cols=84 Identities=14% Similarity=0.064 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHHH
Q 028535 95 DMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVL 174 (207)
Q Consensus 95 diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~l 174 (207)
.+|..+|.-+..+|+++.|.+...+.++... ..+.+-..++.+|+.. .+...|..+++..+
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p------------~~~~~~~~lg~~~~~~-------~~~~~A~~~~~~al 149 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDK------------NNVKALYKLGVANMYF-------GFLEEAKENLYKAA 149 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST------------TCHHHHHHHHHHHHHH-------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc------------ccHHHHHHHHHHHHHc-------ccHHHHHHHHHHHH
Confidence 8999999999999999999999998887421 1234556677777752 34556777777766
Q ss_pred HhhcCCCCcHhHHHHHHHHHHHHHh
Q 028535 175 KQAEGFSDMEEFRDLHACLDELKTK 199 (207)
Q Consensus 175 Kqae~F~ete~~k~L~acL~Ev~~~ 199 (207)
+..- .+.+.+..|..|+......
T Consensus 150 ~~~p--~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 150 SLNP--NNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHST--TCHHHHHHHHHHHHHHHHH
T ss_pred HHCC--CcHHHHHHHHHHHHHHHHH
Confidence 5531 2344555666666555443
No 122
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=39.67 E-value=1e+02 Score=22.13 Aligned_cols=34 Identities=15% Similarity=-0.008 Sum_probs=28.5
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRSY 124 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRsl 124 (207)
+..+.+|..++..+...|+++.|.+...+.++-.
T Consensus 88 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 88 SSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 3448999999999999999999999888877643
No 123
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=39.42 E-value=1e+02 Score=22.04 Aligned_cols=65 Identities=14% Similarity=0.089 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKN 172 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~ 172 (207)
.+.+|-..+..+...|+++.|.+...+.++-... ++.+-..++.+|+.. .+...|.-+++.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~------------~~~~~~~lg~~~~~~-------~~~~~A~~~~~~ 96 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH------------LAVAYFQRGMLYYQT-------EKYDLAIKDLKE 96 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc------------chHHHHHHHHHHHHc-------ccHHHHHHHHHH
Confidence 4789999999999999999999999888874211 234555666777651 233355555555
Q ss_pred HHHh
Q 028535 173 VLKQ 176 (207)
Q Consensus 173 ~lKq 176 (207)
.++.
T Consensus 97 al~~ 100 (213)
T 1hh8_A 97 ALIQ 100 (213)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 5553
No 124
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=38.31 E-value=86 Score=23.38 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=30.4
Q ss_pred hccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 89 RSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 89 ~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
..+..++.|-.++.-+...|+++.|.+...|.++-
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQL 117 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34455899999999999999999999999988873
No 125
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=38.28 E-value=1.2e+02 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=19.0
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
..++.|..++.-+..+|+++.|.+...|.++
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~ 71 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIR 71 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3356666666666666666666666666554
No 126
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=37.90 E-value=1.1e+02 Score=21.71 Aligned_cols=47 Identities=15% Similarity=-0.036 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCc-cccchhHHHHHHHHH
Q 028535 95 DMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSD-LWKDRDRFKRFSYAS 143 (207)
Q Consensus 95 diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~-w~kD~~~F~kya~As 143 (207)
.|=..-+++....+.+....+.+-..|..|+++| |..+ .++.|.++-
T Consensus 15 ~l~~~a~~~~~~~~~i~~~l~~L~~~v~~L~~~g~W~G~--A~~ay~~~~ 62 (103)
T 4i0x_B 15 HIEQVTSRARGFKEFVTENLDQLESRAQKLVQSGQWAGA--AAAAYSQAH 62 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeech--HHHHHHHHH
Confidence 4444556677778888888999999999999999 6554 555555533
No 127
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=36.85 E-value=1.3e+02 Score=22.56 Aligned_cols=33 Identities=6% Similarity=0.006 Sum_probs=24.1
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhc
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQ 125 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslq 125 (207)
.+.+|-.++..+...|+++.|.+...+.++...
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 224 (330)
T 3hym_B 192 DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIK 224 (330)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhh
Confidence 367777777777777777777777777776543
No 128
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=35.97 E-value=85 Score=24.93 Aligned_cols=36 Identities=19% Similarity=0.155 Sum_probs=31.8
Q ss_pred HhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 88 VRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 88 v~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
...+..+++|-.+|..+...|+++.|.+.+.+.++.
T Consensus 213 ~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 213 AENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 345566899999999999999999999999999984
No 129
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=35.28 E-value=1.1e+02 Score=21.31 Aligned_cols=34 Identities=18% Similarity=0.009 Sum_probs=29.0
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+..|-..+.-+..+|+++.|.+...+.++-
T Consensus 93 ~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 93 EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 4445889999999999999999999998887763
No 130
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=35.12 E-value=2e+02 Score=24.16 Aligned_cols=30 Identities=10% Similarity=-0.008 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+.+|...++.+...|+++.|.+...+.+.-
T Consensus 475 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 475 PLLLNELGVVAFNKSDMQTAINHFQNALLL 504 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 556666666666666666666666555543
No 131
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=34.89 E-value=1.5e+02 Score=22.43 Aligned_cols=81 Identities=11% Similarity=0.049 Sum_probs=58.1
Q ss_pred hhhHHHHHHHHHHH----hCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 93 SADMWGLYARWLKN----KGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 93 ~~diWgLyAryh~~----~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
.++.|-..+..+.. .|+++.|.+...|.+.. ..+.+-..|..+|... .|...+...|.-
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--------------~~~~a~~~lg~~~~~~---~~~~~~~~~A~~ 135 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--------------KYAEGCASLGGIYHDG---KVVTRDFKKAVE 135 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------------TCHHHHHHHHHHHHHC---SSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--------------CCccHHHHHHHHHHcC---CCcccCHHHHHH
Confidence 57889999999999 99999999999888763 1356777888888763 455667777877
Q ss_pred HhHHHHHhhcCCCCcHhHHHHHHHHH
Q 028535 169 HLKNVLKQAEGFSDMEEFRDLHACLD 194 (207)
Q Consensus 169 HLk~~lKqae~F~ete~~k~L~acL~ 194 (207)
.++..++.. +.+.+-.|-.++.
T Consensus 136 ~~~~a~~~~----~~~a~~~lg~~~~ 157 (273)
T 1ouv_A 136 YFTKACDLN----DGDGCTILGSLYD 157 (273)
T ss_dssp HHHHHHHTT----CHHHHHHHHHHHH
T ss_pred HHHHHHhcC----cHHHHHHHHHHHH
Confidence 777666542 4455555544443
No 132
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=34.61 E-value=2.2e+02 Score=24.44 Aligned_cols=52 Identities=15% Similarity=0.184 Sum_probs=38.0
Q ss_pred chhhhHHHHHHHHHHHHHHh---ccch---hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 70 SRENEHLMEFLGKILQQVVR---SESS---ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 70 ~r~~e~l~e~~Gkil~qiv~---S~~~---~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
.+.+++....+|-+.++|++ . +. -++=.+-..||+++--...|..+.+-.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~ii~~mk~-~~P~~e~lv~~g~ky~~al~~~~~a~~af~Da~q 62 (253)
T 2d1l_A 5 EAVIEKECSALGGLFQTIISDMKG-SYPVWEDFINKAGKLQSQLRTTVVAAAAFLDAFQ 62 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHhHHHHHHHHHHc-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888999999999997 4 22 24555667799888777777777665544
No 133
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.81 E-value=1.8e+02 Score=23.29 Aligned_cols=76 Identities=17% Similarity=0.116 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.++...|..+...|++..|.+...+..+.+.+.+ |. ...+.+-+.++++|+. ..+.-.|+-.++..
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~-------~~~~~~A~~~~~~a 201 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD---DK---PSLVDVHLLESKVYHK-------LRNLAKSKASLTAA 201 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS---CS---THHHHHHHHHHHHHHH-------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc---cc---hhHHHHHHHHHHHHHH-------hCcHHHHHHHHHHH
Confidence 68899999999999999999999998888877764 21 1245667778888886 24555677666666
Q ss_pred HHhhcCCCC
Q 028535 174 LKQAEGFSD 182 (207)
Q Consensus 174 lKqae~F~e 182 (207)
++.+..+.+
T Consensus 202 l~~~~~~~~ 210 (434)
T 4b4t_Q 202 RTAANSIYC 210 (434)
T ss_dssp HHHHHHSCC
T ss_pred HHHhhcCCC
Confidence 666554433
No 134
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=33.34 E-value=1.9e+02 Score=23.22 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=29.2
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+.+|...++.+...|+++.|.+...+.++.
T Consensus 173 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 206 (450)
T 2y4t_A 173 CVWDAELRELRAECFIKEGEPRKAISDLKAASKL 206 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3344899999999999999999999999888764
No 135
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=33.32 E-value=90 Score=21.53 Aligned_cols=47 Identities=13% Similarity=-0.032 Sum_probs=34.1
Q ss_pred HHHHHHhcc-chhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 83 ILQQVVRSE-SSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 83 il~qiv~S~-~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
+++++..-. ..+.-+-+++..+...|++..|++...+-....-.+-|
T Consensus 31 ~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 31 LLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred HHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 333433333 44889999999999999999999999887775444333
No 136
>1p68_A De novo designed protein S-824; four helix bundle, de novo protein; NMR {Escherichia coli} SCOP: k.8.1.1 PDB: 2jua_A
Probab=33.23 E-value=51 Score=24.90 Aligned_cols=47 Identities=32% Similarity=0.615 Sum_probs=37.6
Q ss_pred CCcchhhHHHHHHhHHHHHhhcCCCC--------cHhHHHHHHHHHHHHHhhccC
Q 028535 157 SGSRRELFAAEMHLKNVLKQAEGFSD--------MEEFRDLHACLDELKTKLQSG 203 (207)
Q Consensus 157 ~G~~reL~sA~MHLk~~lKqae~F~e--------te~~k~L~acL~Ev~~~~~s~ 203 (207)
-|++.+|--..-||.++|.-.-.|-. .|-.|+.|+.|||+.+-+|-.
T Consensus 24 hggkdnlhdvdnhlqnviedihdfmqgggsggklqemmkefqqvldelnnhlqgg 78 (102)
T 1p68_A 24 HGGKDNLHDVDNHLQNVIEDIHDFMQGGGSGGKLQEMMKEFQQVLDELNNHLQGG 78 (102)
T ss_dssp SSCSTTTHHHHHHHHHHHHHHHTTTTTSSTTTHHHHTHHHHHHHHHHHHTTCCSC
T ss_pred cCCccchhhHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHhccC
Confidence 67888898999999999887655533 466789999999999887754
No 137
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=33.22 E-value=1.2e+02 Score=21.91 Aligned_cols=34 Identities=15% Similarity=-0.045 Sum_probs=29.1
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+..|-.+|..+..+|+++.|.+...+.++-
T Consensus 118 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 118 DKNNVKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 3444899999999999999999999998887764
No 138
>3fav_A ESAT-6-like protein ESXB; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_A
Probab=32.66 E-value=49 Score=23.09 Aligned_cols=43 Identities=14% Similarity=0.030 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHH
Q 028535 96 MWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSY 141 (207)
Q Consensus 96 iWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~ 141 (207)
|=..-+++....+++....+.+-..|..|+++ |..+. +..|.+
T Consensus 12 l~~~A~~~~~~~~~l~~~l~~l~~~~~~L~~~-W~G~A--~~af~~ 54 (101)
T 3fav_A 12 LAQEAGNFERISGDLKTQIDQVESTAGSLQGQ-WRGAA--GTAAQA 54 (101)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CchHH--HHHHHH
Confidence 33444566777777777777777888888775 87653 344444
No 139
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=32.29 E-value=1.6e+02 Score=22.22 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=29.3
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+++|...+..+...|+++.|.+...+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 183 (359)
T 3ieg_A 150 CVWDAELRELRAECFIKEGEPRKAISDLKAASKL 183 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3444899999999999999999999998888764
No 140
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=32.04 E-value=1.4e+02 Score=21.34 Aligned_cols=38 Identities=8% Similarity=0.038 Sum_probs=31.8
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccC
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGS 127 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS 127 (207)
.+..+..|-.++..+...|+++.|.+...+.++-..+.
T Consensus 67 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCc
Confidence 34448999999999999999999999999988855443
No 141
>1ufz_A Hypothetical protein BAB28515; HBS1-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, translatio; NMR {Mus musculus} SCOP: a.5.9.1
Probab=31.72 E-value=30 Score=25.75 Aligned_cols=16 Identities=31% Similarity=0.621 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHhhcc
Q 028535 187 RDLHACLDELKTKLQS 202 (207)
Q Consensus 187 k~L~acL~Ev~~~~~s 202 (207)
+.|.+||++++.+++-
T Consensus 32 arL~SCLd~iR~VlGd 47 (83)
T 1ufz_A 32 ARLYSCLDHMREVLGD 47 (83)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHcc
Confidence 4899999999999986
No 142
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=31.35 E-value=2.2e+02 Score=23.32 Aligned_cols=34 Identities=9% Similarity=-0.092 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccC
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGS 127 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS 127 (207)
+..|...+..+...|+++.|.+...+.++-....
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 180 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYE 180 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcc
Confidence 7889999999999999999999999999876554
No 143
>1m3w_A H10H24; four-helix bundle, heme binding, maquette, heme binding protein, electron transport, de novo protein; 2.80A {Synthetic} SCOP: k.8.1.1
Probab=30.92 E-value=38 Score=21.04 Aligned_cols=30 Identities=27% Similarity=0.482 Sum_probs=23.7
Q ss_pred chhhHHHHHHHHHHHhCChhhhHHHHHHHH
Q 028535 92 SSADMWGLYARWLKNKGDLTMCSEALLKQV 121 (207)
Q Consensus 92 ~~~diWgLyAryh~~~G~~~~a~EA~LKqV 121 (207)
++++||.|-..|-+.--++.+--|.+||.+
T Consensus 2 gggeiwklheeflkkfeellklheerlkkm 31 (32)
T 1m3w_A 2 GGGEIWKLHEEFLKKFEELLKLHEERLKKM 31 (32)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 458999999998888777777777777743
No 144
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=30.83 E-value=1.9e+02 Score=27.55 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=28.2
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
.+..++.|-.++.-+..+|+++.|.++..|.++
T Consensus 73 ~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 73 SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444588999999999999999999999988886
No 145
>2gsc_A Putative uncharacterized protein XCC0516; four-helix bundle, homopentamer, pentameric toroid, unknown function; 2.45A {Xanthomonas campestris PV} SCOP: a.29.16.1
Probab=30.49 E-value=98 Score=23.24 Aligned_cols=53 Identities=23% Similarity=0.261 Sum_probs=37.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHHHHhhcCCCCcHhHHHHHHHHHHHHHhhcc
Q 028535 129 LWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQAEGFSDMEEFRDLHACLDELKTKLQS 202 (207)
Q Consensus 129 w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~lKqae~F~ete~~k~L~acL~Ev~~~~~s 202 (207)
-.+|.-+|=..|..|+.-++.++++.-. .+|-+.+.|..|..-++|+-+++.+
T Consensus 65 s~~df~~~L~iA~~s~~E~~~~L~la~~---------------------~~yi~~~~~~~l~~~~~ei~kml~~ 117 (128)
T 2gsc_A 65 STPDYSRFLSIARGSLSELDTQVQIAAR---------------------LGYSRSEDDQSVRRQVDLVFAKLTA 117 (128)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHH---------------------TTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHH---------------------cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3578888888888888888888875541 1567778888888888888777653
No 146
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=30.30 E-value=2.8e+02 Score=24.35 Aligned_cols=97 Identities=11% Similarity=-0.012 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+....|.-+...|+++.|.+...|.+.-++-.-=.... ..|..-..|..+|... -+...|+..++-.
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp----~~a~~l~nLa~~~~~~-------g~~~eA~~~~~~A 397 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP----VRGVQVMKVGKLQLHQ-------GMFPQAMKNLRLA 397 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH----HHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh----HHHHHHHHHHHHHHhc-------CCHHHHHHHHHHH
Confidence 4667777777888999999999988887655432111111 3567777888898871 2344788888888
Q ss_pred HHhhc-CCC-CcHhHHHHHHHHHHHHHhhc
Q 028535 174 LKQAE-GFS-DMEEFRDLHACLDELKTKLQ 201 (207)
Q Consensus 174 lKqae-~F~-ete~~k~L~acL~Ev~~~~~ 201 (207)
++.-+ .+. ++|.++++..-|.+++.-++
T Consensus 398 l~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 398 FDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 88766 665 47888877777776665443
No 147
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=30.18 E-value=2e+02 Score=22.58 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+++|..++..+..+|+++.|.+...+.++........+ | ..+.+-..++.+|+.. .+.-.|.-+++..
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~----~-~~~~~~~~lg~~~~~~-------g~~~~A~~~~~~a 225 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ----W-SLKDYFLKKGLCQLAA-------TDAVAAARTLQEG 225 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG----G-GHHHHHHHHHHHHHHT-------TCHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc----H-HHHHHHHHHHHHHHHc-------CCHHHHHHHHHHH
Confidence 57888999999999999999999999888654433211 0 0122334455555531 2333455555554
Q ss_pred HHhhcCCCCcHhH
Q 028535 174 LKQAEGFSDMEEF 186 (207)
Q Consensus 174 lKqae~F~ete~~ 186 (207)
++.-.+|.+..+.
T Consensus 226 l~l~p~~~~~~~~ 238 (292)
T 1qqe_A 226 QSEDPNFADSRES 238 (292)
T ss_dssp GCC---------H
T ss_pred HhhCCCCCCcHHH
Confidence 4433344444333
No 148
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=29.76 E-value=2e+02 Score=22.39 Aligned_cols=73 Identities=7% Similarity=-0.044 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
..+|...+..+..+|+++.|.+...|.+.-++... ......+.+-..|+.+|.+. .+...|.-+++..
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~nlg~~y~~~-------~~y~~A~~~~~~a 222 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-----DNEEFDVKVRYNHAKALYLD-------SRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS-----CCHHHHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc-----cchhHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHH
Confidence 34788889999999999999999999987665431 12234556667788888762 3444666666666
Q ss_pred HHhhc
Q 028535 174 LKQAE 178 (207)
Q Consensus 174 lKqae 178 (207)
++.+.
T Consensus 223 l~~~~ 227 (293)
T 3u3w_A 223 IEISC 227 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 149
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=29.64 E-value=82 Score=25.98 Aligned_cols=34 Identities=12% Similarity=0.009 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccC
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGS 127 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS 127 (207)
++.|...+..+...|+++.|.....+.++-....
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 212 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDD 212 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccc
Confidence 5668888888999999999999999988765443
No 150
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=28.50 E-value=2.8e+02 Score=23.82 Aligned_cols=64 Identities=13% Similarity=-0.012 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
..+|..+|.-+..+|+++.|.+...+.++--.. ++.+-..++.+|+.. .+...|.-+++.+
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~------------~~~a~~~~g~a~~~~-------g~~~~A~~~~~~a 377 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA------------NEKGLYRRGEAQLLM-------NEFESAKGDFEKV 377 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------------CHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc------------cHHHHHHHHHHHHHc-------cCHHHHHHHHHHH
Confidence 588999999999999999999999998874221 245556667777752 2344566666665
Q ss_pred HHh
Q 028535 174 LKQ 176 (207)
Q Consensus 174 lKq 176 (207)
++.
T Consensus 378 l~l 380 (457)
T 1kt0_A 378 LEV 380 (457)
T ss_dssp HTT
T ss_pred HHh
Confidence 554
No 151
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=28.37 E-value=1.9e+02 Score=21.68 Aligned_cols=99 Identities=13% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHhccch-hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 028535 82 KILQQVVRSESS-ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSR 160 (207)
Q Consensus 82 kil~qiv~S~~~-~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~ 160 (207)
.+++++...... +..|-..+..+...|+++.|.+...+.+...... ..+-..++.+|.. .
T Consensus 42 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------------~~~~~~la~~~~~-------~ 102 (327)
T 3cv0_A 42 LAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD------------IAVHAALAVSHTN-------E 102 (327)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC------------HHHHHHHHHHHHH-------T
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC------------HHHHHHHHHHHHH-------c
Q ss_pred hhhHHHHHHhHHHHHh-------------------------hc-CCCCcHhHHHHHHHHHHHHHh
Q 028535 161 RELFAAEMHLKNVLKQ-------------------------AE-GFSDMEEFRDLHACLDELKTK 199 (207)
Q Consensus 161 reL~sA~MHLk~~lKq-------------------------ae-~F~ete~~k~L~acL~Ev~~~ 199 (207)
.+...|.-+++.+++. +. -+.....|.+-..+++++...
T Consensus 103 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 167 (327)
T 3cv0_A 103 HNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEM 167 (327)
T ss_dssp TCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhh
No 152
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=28.17 E-value=3.4e+02 Score=24.54 Aligned_cols=95 Identities=8% Similarity=-0.019 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+......|.-+...|+++.|.+...|.+.-++-.-=... -..|..-..|+.+|..- -+...|+-+++-.
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H----p~~a~~l~nLa~~~~~~-------G~~~eA~~~~~~A 419 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN----AQLGMAVMRAGLTNWHA-------GHIEVGHGMICKA 419 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC----HHHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC----HHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHH
Confidence 567777888889999999999988877654332211111 13566677888888861 2344688888877
Q ss_pred HHhhc-CCC-CcHhHHHHHHHHHHHHHh
Q 028535 174 LKQAE-GFS-DMEEFRDLHACLDELKTK 199 (207)
Q Consensus 174 lKqae-~F~-ete~~k~L~acL~Ev~~~ 199 (207)
++.-+ .++ +++..+++...|.+....
T Consensus 420 l~i~~~~lG~~Hp~~~~~~~~l~~~~~e 447 (490)
T 3n71_A 420 YAILLVTHGPSHPITKDLEAMRMQTEME 447 (490)
T ss_dssp HHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHH
Confidence 77766 554 478888888777776643
No 153
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=27.86 E-value=1.6e+02 Score=20.66 Aligned_cols=31 Identities=10% Similarity=0.034 Sum_probs=21.5
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+++|..++..+...|+++.|.+...+.+..
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 71 (225)
T 2vq2_A 41 NELAWLVRAEIYQYLKVNDKAQESFRQALSI 71 (225)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Confidence 3667777777777777777777776666553
No 154
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=26.15 E-value=1.2e+02 Score=18.90 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=28.5
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+..|..++..+...|+++.|.+...+.+..
T Consensus 31 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 64 (136)
T 2fo7_A 31 DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 64 (136)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3344889999999999999999999998887764
No 155
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=25.95 E-value=3e+02 Score=23.20 Aligned_cols=68 Identities=18% Similarity=0.129 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHHHH----hCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHH
Q 028535 93 SADMWGLYARWLKN----KGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEM 168 (207)
Q Consensus 93 ~~diWgLyAryh~~----~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~M 168 (207)
.++.|-.++.++.. .+|++.|.+...|.+.. + .+.+-..|..+|.. +.|...+...|..
T Consensus 362 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~------------~~~a~~~Lg~~y~~---g~g~~~d~~~A~~ 424 (490)
T 2xm6_A 362 EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--G------------LSAAQVQLGEIYYY---GLGVERDYVQAWA 424 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T------------CHHHHHHHHHHHHH---TSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--C------------CHHHHHHHHHHHHc---CCCCCCCHHHHHH
Confidence 36777777777777 77888888877777652 1 13455566667765 4466777778888
Q ss_pred HhHHHHHhh
Q 028535 169 HLKNVLKQA 177 (207)
Q Consensus 169 HLk~~lKqa 177 (207)
+++-.+++.
T Consensus 425 ~~~~A~~~~ 433 (490)
T 2xm6_A 425 WFDTASTND 433 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHCC
Confidence 887777665
No 156
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=25.89 E-value=2.1e+02 Score=21.48 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHH--------hCChhhhHHHHHHHHhhhccCccccchh-----HHHHHHHHH
Q 028535 77 MEFLGKILQQVVRSESSADMWGLYARWLKN--------KGDLTMCSEALLKQVRSYQGSDLWKDRD-----RFKRFSYAS 143 (207)
Q Consensus 77 ~e~~Gkil~qiv~S~~~~diWgLyAryh~~--------~G~~~~a~EA~LKqVRslqgS~w~kD~~-----~F~kya~As 143 (207)
++.+-++++.--+++..++.|-..+.-+.. .|+++.|.+...+.++....+..-.+.- .-..++.+.
T Consensus 72 ~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~ 151 (261)
T 3qky_A 72 ASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQ 151 (261)
T ss_dssp HHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHH
Confidence 334444443222233336788888998888 9999999999999998766553322111 112233444
Q ss_pred HHHHHHHHHHhcCCCcchhhHHHHHHhHHHHHhh
Q 028535 144 LELCKVYMEISSSSGSRRELFAAEMHLKNVLKQA 177 (207)
Q Consensus 144 l~Lc~vY~ei~s~~G~~reL~sA~MHLk~~lKqa 177 (207)
..++.+|+. ..+...|.-+++.+++.-
T Consensus 152 ~~la~~~~~-------~g~~~~A~~~~~~~l~~~ 178 (261)
T 3qky_A 152 YEAARLYER-------RELYEAAAVTYEAVFDAY 178 (261)
T ss_dssp HHHHHHHHH-------TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH-------ccCHHHHHHHHHHHHHHC
Confidence 666777765 234557888888877653
No 157
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=25.87 E-value=2.6e+02 Score=22.42 Aligned_cols=76 Identities=8% Similarity=-0.064 Sum_probs=53.1
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+..+...+.-+..+|+++.|.+...+.+.-.+..+ | -...+.+-..|+.+|... .+...|.-+++..
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---~---~~~~~~~~~~lg~~y~~~-------g~~~~A~~~~~~a 250 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK---Q---PQLMGRTLYNIGLCKNSQ-------SQYEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---C---HHHHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC---C---hHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHH
Confidence 56888889999999999999999999988665442 1 123455566677777752 3445677777777
Q ss_pred HHhhcCCCC
Q 028535 174 LKQAEGFSD 182 (207)
Q Consensus 174 lKqae~F~e 182 (207)
++.++...+
T Consensus 251 l~~~~~~~~ 259 (383)
T 3ulq_A 251 IAVFEESNI 259 (383)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhhcc
Confidence 776653333
No 158
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=25.24 E-value=1.6e+02 Score=32.04 Aligned_cols=41 Identities=17% Similarity=0.310 Sum_probs=33.6
Q ss_pred hhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHH
Q 028535 93 SADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYAS 143 (207)
Q Consensus 93 ~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~As 143 (207)
.+.+|.-||+.....|.+..|+++..|+ +|.+.|.+.+.+.
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA----------dD~say~eVa~~~ 1144 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA----------DDPSSYMEVVQAA 1144 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc----------CChHHHHHHHHHH
Confidence 3899999999999999999999999885 6666665555443
No 159
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=25.12 E-value=2.3e+02 Score=25.89 Aligned_cols=33 Identities=9% Similarity=-0.089 Sum_probs=25.8
Q ss_pred cchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 91 ESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 91 ~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
+..++.|-.++.-+...|+++.|.++..|.++-
T Consensus 464 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 464 GWRWRLVWYRAVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344788888888888888888888888887753
No 160
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=24.65 E-value=2.7e+02 Score=22.28 Aligned_cols=78 Identities=9% Similarity=0.058 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+++|...+..+...|+++.|.+...|.+.-++..+- .-...+.+-..|+.+|... .+.-.|.-+++..
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~-----~~~~~~~~~~~lg~~~~~~-------g~~~~A~~~~~~a 210 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA-----YNIRLLQCHSLFATNFLDL-------KQYEDAISHFQKA 210 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST-----THHHHHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc-----chHHHHHHHHHHHHHHHHh-------cCHHHHHHHHHHH
Confidence 689999999999999999999999999887766532 1233456666777777752 3455677788777
Q ss_pred HHhhcCCCCc
Q 028535 174 LKQAEGFSDM 183 (207)
Q Consensus 174 lKqae~F~et 183 (207)
++.+....+.
T Consensus 211 l~~~~~~~~~ 220 (383)
T 3ulq_A 211 YSMAEAEKQP 220 (383)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHcCCh
Confidence 7776644443
No 161
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=24.61 E-value=2.8e+02 Score=22.43 Aligned_cols=75 Identities=13% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHHHhccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcch
Q 028535 82 KILQQVVRSESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRR 161 (207)
Q Consensus 82 kil~qiv~S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~r 161 (207)
+.++++......+.+|-..+.-+...|+++.|.+...+.++--. .++.+-..++.+|+. ..
T Consensus 27 ~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p------------~~~~~~~~l~~~~~~-------~g 87 (514)
T 2gw1_A 27 KYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKP------------DYSKVLLRRASANEG-------LG 87 (514)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCS------------CCHHHHHHHHHHHHH-------TT
T ss_pred HHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccCh------------HHHHHHHHHHHHHHH-------Hh
Q ss_pred hhHHHHHHhHHHHH
Q 028535 162 ELFAAEMHLKNVLK 175 (207)
Q Consensus 162 eL~sA~MHLk~~lK 175 (207)
+...|.-.++.+++
T Consensus 88 ~~~~A~~~~~~~~~ 101 (514)
T 2gw1_A 88 KFADAMFDLSVLSL 101 (514)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHh
No 162
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=24.21 E-value=2.8e+02 Score=22.29 Aligned_cols=107 Identities=12% Similarity=-0.020 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHHHhccch---hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHH
Q 028535 72 ENEHLMEFLGKILQQVVRSESS---ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCK 148 (207)
Q Consensus 72 ~~e~l~e~~Gkil~qiv~S~~~---~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~ 148 (207)
..++-.+.+-+.+.-.-+.+.. +.++.-.+.-+...|+++.|.+...+.+.-.+.. ....++.+-..|+.
T Consensus 197 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-------~~~~~~~~~~~la~ 269 (378)
T 3q15_A 197 HYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK-------VPDLLPKVLFGLSW 269 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-------CGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh-------CChhHHHHHHHHHH
Q ss_pred HHHHHhcCCCcchhhHHHHHHhHHHHHhhcCCCCcHhHHHHHHH
Q 028535 149 VYMEISSSSGSRRELFAAEMHLKNVLKQAEGFSDMEEFRDLHAC 192 (207)
Q Consensus 149 vY~ei~s~~G~~reL~sA~MHLk~~lKqae~F~ete~~k~L~ac 192 (207)
+|.. ..+...|.-+++..++.+....+.+-...+..+
T Consensus 270 ~~~~-------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l 306 (378)
T 3q15_A 270 TLCK-------AGQTQKAFQFIEEGLDHITARSHKFYKELFLFL 306 (378)
T ss_dssp HHHH-------TTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHH
T ss_pred HHHH-------CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
No 163
>1uer_A SOD, superoxide dismutase; metal-specific, cambialistic, oxidoreductase; 1.60A {Porphyromonas gingivalis} SCOP: a.2.11.1 d.44.1.1 PDB: 1qnn_A 1ues_A
Probab=23.88 E-value=65 Score=26.52 Aligned_cols=27 Identities=19% Similarity=0.099 Sum_probs=20.7
Q ss_pred HHHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 103 WLKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 103 yh~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
-.+.-|.++.-.+.+...--+.+||||
T Consensus 97 I~~~FGS~d~fk~~f~~aa~~~fGSGW 123 (191)
T 1uer_A 97 IDKQFGSFEKFKEEFNTAGTTLFGSGW 123 (191)
T ss_dssp HHHHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCeE
Confidence 344457788888888888888899988
No 164
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=23.83 E-value=3.5e+02 Score=23.26 Aligned_cols=59 Identities=14% Similarity=-0.011 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchh---HHHHHHHHHHHHHHHHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRD---RFKRFSYASLELCKVYME 152 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~---~F~kya~Asl~Lc~vY~e 152 (207)
++.|...+..+...|++..|.....+.++-........+.. .-...+.+-..|+.+|+.
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~ 329 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLK 329 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888899999999999999999999998766553221111 111224455566666664
No 165
>2nyb_A Superoxide dismutase [FE]; iron superoxide dismutase Q69E, fesod, oxidoreductase; 1.10A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 2bkb_A 1isa_A 1isb_A 1isc_A 1za5_A 2w7w_A
Probab=23.60 E-value=66 Score=26.50 Aligned_cols=26 Identities=12% Similarity=0.064 Sum_probs=21.0
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+.+.--+.+||||
T Consensus 97 ~~~FGS~d~fk~~f~~aa~~~fGSGW 122 (192)
T 2nyb_A 97 AASFGSFADFKAQFTDAAIKNFGSGW 122 (192)
T ss_dssp HHHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 44458888888888888888899998
No 166
>1my6_A Iron (III) superoxide dismutase; iron speroxide dismutase, thermophIle, reactive oxygen species, cyanobacteria, SOD, fesod; 1.60A {Thermosynechococcus elongatus} SCOP: a.2.11.1 d.44.1.1
Probab=23.55 E-value=66 Score=26.65 Aligned_cols=26 Identities=12% Similarity=0.042 Sum_probs=21.3
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+...--+.+||||
T Consensus 103 ~~~FGS~d~fk~~f~~aa~~~fGSGW 128 (199)
T 1my6_A 103 NSAFGSYDEFKAQFKNAAATQFGSGW 128 (199)
T ss_dssp HHHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHHcCCHHHHHHHHHHHHhhCCCCeE
Confidence 34458888888888888888999998
No 167
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=23.46 E-value=1.6e+02 Score=19.28 Aligned_cols=37 Identities=5% Similarity=-0.079 Sum_probs=31.2
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhcc
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQG 126 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslqg 126 (207)
.+..+..|-.++..+...|+++.|.+...+.++-..+
T Consensus 73 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 73 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 4445899999999999999999999999888875443
No 168
>2gpc_A Iron superoxide dismutase; alpha+beta structure, oxidoreductase; 1.90A {Trypanosoma cruzi} PDB: 3esf_A
Probab=23.13 E-value=68 Score=26.45 Aligned_cols=26 Identities=15% Similarity=0.096 Sum_probs=20.5
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+...--+.+||||
T Consensus 99 ~~~FGS~d~fk~~f~~aa~~~fGSGW 124 (194)
T 2gpc_A 99 NASFGSFAKFKEEFTNVAVGHFGSGW 124 (194)
T ss_dssp HHHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 34457888888888888888899988
No 169
>2rcv_A Superoxide dismutase [MN]; bacillus subtilis,superoxide dismutase, manganese, metal- binding, oxidoreductase, phosphorylation; 1.60A {Bacillus subtilis} PDB: 1xuq_A 1jr9_A
Probab=23.08 E-value=68 Score=26.57 Aligned_cols=25 Identities=16% Similarity=0.121 Sum_probs=20.8
Q ss_pred HHhCChhhhHHHHHHHHhhhccCcc
Q 028535 105 KNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 105 ~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
+.-|.++.-.+.+.+.--+.+||||
T Consensus 107 ~~FGS~d~fk~~F~~aa~~~fGSGW 131 (202)
T 2rcv_A 107 SVFGSFDKFKEQFAAAAAGRFGSGW 131 (202)
T ss_dssp HHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 3358888888888888888999998
No 170
>1mng_A Manganese superoxide dismutase; oxidoreductase(superoxide acceptor); 1.80A {Thermus thermophilus} SCOP: a.2.11.1 d.44.1.1 PDB: 3mds_A
Probab=23.02 E-value=67 Score=26.70 Aligned_cols=26 Identities=19% Similarity=0.143 Sum_probs=21.4
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+.+.--+.+||||
T Consensus 107 ~~~FGS~d~fk~~f~~aa~~~fGSGW 132 (203)
T 1mng_A 107 DEQFGGFQALKEKLTQAAMGRFGSGW 132 (203)
T ss_dssp HHHHSSHHHHHHHHHHHHHTCCSSEE
T ss_pred HHHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 34458888888888888888999998
No 171
>1dt0_A Superoxide dismutase; pseudomonas ovalis, oxidoreductase; 2.10A {Pseudomonas putida} SCOP: a.2.11.1 d.44.1.1
Probab=22.71 E-value=68 Score=26.56 Aligned_cols=26 Identities=19% Similarity=0.112 Sum_probs=20.6
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+...--+.+||||
T Consensus 97 ~~~FGS~d~fk~~f~~aa~~~fGSGW 122 (197)
T 1dt0_A 97 NAAFGSFDKFKEEFTKTSVGTFGSGW 122 (197)
T ss_dssp HHHHSSHHHHHHHHHHHHHTCCSSEE
T ss_pred HHHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 44457888888888888888899988
No 172
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=22.62 E-value=1.6e+02 Score=19.65 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=22.8
Q ss_pred HHHHHHHhCChhhhHHHHHHHHhhhccCccccc
Q 028535 100 YARWLKNKGDLTMCSEALLKQVRSYQGSDLWKD 132 (207)
Q Consensus 100 yAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD 132 (207)
-+++....+++......+-.+|..|++ .|.+.
T Consensus 18 A~~~~~~~~~i~~~l~~L~~~~~~L~~-~W~G~ 49 (93)
T 4ioe_A 18 AGNFKNAAGEAQSQINRLEGDINSLEG-QWAGA 49 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTT-SSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCch
Confidence 345566667777777888888888874 68763
No 173
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=22.20 E-value=2.9e+02 Score=21.78 Aligned_cols=71 Identities=14% Similarity=-0.009 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+..|.-.+..+...|+++.|.+...+.+.-+...+ .+...+.+-..|..+|.. | +.-.|.-|++..
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g------~~~~~a~~~~~lg~~~~~-----g---~~~~A~~~~~~A 141 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG------TPDTAAMALDRAGKLMEP-----L---DLSKAVHLYQQA 141 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT------CHHHHHHHHHHHHHHHTT-----T---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC------CHHHHHHHHHHHHHHHHc-----C---CHHHHHHHHHHH
Confidence 56777778889999999999999999988665432 344555666666666632 1 233455555555
Q ss_pred HHhhc
Q 028535 174 LKQAE 178 (207)
Q Consensus 174 lKqae 178 (207)
++...
T Consensus 142 l~~~~ 146 (307)
T 2ifu_A 142 AAVFE 146 (307)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 174
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=22.08 E-value=1.5e+02 Score=23.63 Aligned_cols=29 Identities=14% Similarity=0.184 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
+.+|...+.-+...|+++.|.+...+.++
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 265 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIE 265 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 55566666666666666666665555544
No 175
>2rld_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.29.16.1
Probab=21.93 E-value=2.3e+02 Score=21.01 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=37.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHHHHhhcCCCCcHhHHHHHHHHHHHHHhhcc
Q 028535 130 WKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQAEGFSDMEEFRDLHACLDELKTKLQS 202 (207)
Q Consensus 130 ~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~lKqae~F~ete~~k~L~acL~Ev~~~~~s 202 (207)
.+|.-+|=..|..|+.=++.++++.. -.+|-+.+.|..|..-++|+.+++.+
T Consensus 62 ~~df~~~L~iA~~s~~E~~~~L~l~~---------------------~~~yi~~~~~~~l~~~~~ei~kmL~~ 113 (121)
T 2rld_A 62 RADFINKLNIALKEANETEYWLELLI---------------------RTEYITREQYESINNDSTEINKLLIS 113 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777777777777777777776543 11677778888888888888887754
No 176
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=21.77 E-value=3e+02 Score=21.76 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=16.0
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHh
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVR 122 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVR 122 (207)
++.|...+..+...|+++.|.+...+.++
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45555555555555555555555555444
No 177
>3vrc_A Cytochrome C'; C-type cytpchrome, electron transport; HET: HEC PG4; 1.00A {Thermochromatium tepidum} PDB: 1bbh_A*
Probab=21.58 E-value=1.8e+02 Score=22.10 Aligned_cols=48 Identities=8% Similarity=0.132 Sum_probs=31.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHHHHhh
Q 028535 129 LWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNVLKQA 177 (207)
Q Consensus 129 w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~lKqa 177 (207)
-|.|++.|++.+..-.+-...... ...+|....|-.+=.-|-.++|-|
T Consensus 77 IW~~~~~F~~~~~~~~~aa~~L~~-aa~~gd~~~~~~a~~~vg~tCkaC 124 (131)
T 3vrc_A 77 LFQNLEDVGKLARDLGTAANALAA-AAATGEANAVKSAFADVGAACKAC 124 (131)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHh-ccccCcHHHHHHHHHHHHHHHHHH
Confidence 577888888877766555544333 334566667777777777777777
No 178
>3cei_A Superoxide dismutase; oxidoreductase; 2.40A {Helicobacter pylori}
Probab=21.48 E-value=76 Score=26.73 Aligned_cols=26 Identities=27% Similarity=0.344 Sum_probs=20.8
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+.+.--+.+||||
T Consensus 96 ~~~FGS~d~fk~~F~~aa~~~fGSGW 121 (213)
T 3cei_A 96 EKDFGSLEKFKEDFIKSATTLFGSGW 121 (213)
T ss_dssp HHHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHHhCCHHHHHHHHHHHHhhCcCceE
Confidence 44457888888888888888899988
No 179
>1xre_A SODA-2, superoxide dismutase; spine, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=21.36 E-value=74 Score=26.81 Aligned_cols=25 Identities=20% Similarity=0.053 Sum_probs=21.1
Q ss_pred HHhCChhhhHHHHHHHHhhhccCcc
Q 028535 105 KNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 105 ~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
+.-|.++.-.+.+...--+.+||||
T Consensus 117 ~~FGS~d~fk~~F~~aa~~~fGSGW 141 (217)
T 1xre_A 117 YYFNTFDNLKDQLSKAAISRFGSGY 141 (217)
T ss_dssp HHHSSHHHHHHHHHHHHHTCCSSEE
T ss_pred HHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 3458888888888888888999998
No 180
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=21.30 E-value=2.8e+02 Score=23.67 Aligned_cols=15 Identities=20% Similarity=0.100 Sum_probs=7.5
Q ss_pred hCChhhhHHHHHHHH
Q 028535 107 KGDLTMCSEALLKQV 121 (207)
Q Consensus 107 ~G~~~~a~EA~LKqV 121 (207)
.||++.|.+...|.+
T Consensus 264 ~~d~~~A~~~~~~Aa 278 (452)
T 3e4b_A 264 LGDVEQMMKYLDNGR 278 (452)
T ss_dssp GCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 455555555544443
No 181
>1ix9_A Mnsod, superoxide dismutase; manganese superoxide dismutase, Y174F mutant, hydrogen bond, reactivity, ultra-high resolution, oxidoreductase; 0.90A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 1i0h_A 1ixb_A 1zlz_A 1d5n_A 1mmm_A 1vew_A 3k9s_A 3ot7_A 1en5_A 1en4_A 1i08_A 1en6_A
Probab=21.24 E-value=78 Score=26.27 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=20.6
Q ss_pred HHhCChhhhHHHHHHHHhhhccCcc
Q 028535 105 KNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 105 ~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
+.-|.++.-.+.+.+.--+.+||||
T Consensus 104 ~~FGS~d~fk~~F~~aa~~~fGSGW 128 (205)
T 1ix9_A 104 RDFGSVDNFKAEFEKAAASRFGSGW 128 (205)
T ss_dssp HHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 3458888888888888888999998
No 182
>1pl4_A Superoxide dismutase [MN], mitochondrial; oxidoreductase; 1.47A {Homo sapiens} SCOP: a.2.11.1 d.44.1.1 PDB: 1n0j_A 1luv_A 1msd_A 2adq_B 1pm9_A 3c3t_A 1ap6_A 1ap5_A 1var_A 3c3s_A 1em1_A 1qnm_A 1zte_A 1luw_A 2gds_A 1zuq_A 2adp_A* 1zsp_A 1n0n_A 2p4k_A ...
Probab=21.19 E-value=77 Score=26.18 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=20.2
Q ss_pred HHhCChhhhHHHHHHHHhhhccCcc
Q 028535 105 KNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 105 ~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
+.-|.++.-.+.+.+.--+.+||||
T Consensus 99 ~~FGS~d~fk~~F~~aa~~~fGSGW 123 (198)
T 1pl4_A 99 RDFGSFDKFKEKLTAASVGVQGSGW 123 (198)
T ss_dssp HHHSSHHHHHHHHHHHHHTCCSSEE
T ss_pred HHhCCHHHHHHHHHHHHhhCCCCcE
Confidence 3358888888888888888999988
No 183
>3de8_A Soluble cytochrome B562; Cu-stabilized dimeric superstructure, electron transport, heme, iron, metal-binding, periplasm, transport; HET: HEM; 1.72A {Escherichia coli} SCOP: a.24.3.1 PDB: 2qla_A* 3de9_A* 3c62_A* 3c63_A* 2bc5_A* 3l1m_A* 1qq3_A* 1apc_A 1qpu_A* 256b_A* 3foo_A* 3fop_A* 3nmi_A* 3nmj_A* 3nmk_A* 1lm3_B* 1m6t_A 1yyj_A 1yyx_A 3hnk_A* ...
Probab=21.10 E-value=2.3e+02 Score=20.24 Aligned_cols=12 Identities=8% Similarity=0.072 Sum_probs=6.8
Q ss_pred hhHHHHHHHHHH
Q 028535 94 ADMWGLYARWLK 105 (207)
Q Consensus 94 ~diWgLyAryh~ 105 (207)
|+||.--+++.+
T Consensus 56 p~iw~~~~~F~~ 67 (106)
T 3de8_A 56 PEMHDFRHGFDI 67 (106)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHhHHHHHH
Confidence 556655555555
No 184
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=21.06 E-value=1.6e+02 Score=23.22 Aligned_cols=36 Identities=6% Similarity=-0.074 Sum_probs=30.5
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhhhc
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRSYQ 125 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRslq 125 (207)
.+..+..|-.+|.-+..+|+++.|.+...+.++--.
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 344489999999999999999999999998887543
No 185
>2awp_A Iron super-oxide dismutase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.00A {Plasmodium knowlesi} PDB: 2bpi_A 2a03_A 2goj_A
Probab=21.05 E-value=65 Score=26.65 Aligned_cols=26 Identities=12% Similarity=0.114 Sum_probs=20.5
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+...--+.+||||
T Consensus 98 ~~~FGS~d~fk~~F~~aa~~~fGSGW 123 (198)
T 2awp_A 98 QEDFGSFNNFKNEFSNVLCGHFGSGW 123 (198)
T ss_dssp HHHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHHcCCHHHHHHHHHHHHhhCCCCeE
Confidence 44457788888888888888899988
No 186
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=21.00 E-value=3.4e+02 Score=24.82 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=29.6
Q ss_pred ccchhhHHHHHHHHHHHhCChhhhHHHHHHHHhh
Q 028535 90 SESSADMWGLYARWLKNKGDLTMCSEALLKQVRS 123 (207)
Q Consensus 90 S~~~~diWgLyAryh~~~G~~~~a~EA~LKqVRs 123 (207)
.+..+++|-..|.-+...|+++.|.+...+.++.
T Consensus 429 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~ 462 (681)
T 2pzi_A 429 FSESVELPLMEVRALLDLGDVAKATRKLDDLAER 462 (681)
T ss_dssp CTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Confidence 3455899999999999999999999998888763
No 187
>1gv3_A Manganese superoxide dismutase; anabaena PCC 7120,; 2.0A {Anabaena SP} SCOP: a.2.11.1 d.44.1.1
Probab=20.96 E-value=77 Score=27.36 Aligned_cols=26 Identities=12% Similarity=0.045 Sum_probs=20.9
Q ss_pred HHHhCChhhhHHHHHHHHhhhccCcc
Q 028535 104 LKNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 104 h~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
.+.-|.++.-.+.+.+.--+.+||||
T Consensus 141 ~~~FGS~d~Fk~~F~~aa~~~fGSGW 166 (248)
T 1gv3_A 141 NQTFGSFEEFKKQFNQAGGDRFGSGW 166 (248)
T ss_dssp HHHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHhhCCHHHHHHHHHHHHhhCCCCeE
Confidence 34458888888888888888899998
No 188
>1ma1_A Superoxide dismutase; metal specificity, azide inhibition, peroxide inactivation, oxidoreductase; 2.60A {Methanothermobacterthermautotrophicus} SCOP: a.2.11.1 d.44.1.1
Probab=20.84 E-value=78 Score=26.32 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=20.8
Q ss_pred HHhCChhhhHHHHHHHHhhhccCcc
Q 028535 105 KNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 105 ~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
+.-|.++.-.+.+.+.--+.+||||
T Consensus 108 ~~FGS~d~fk~~F~~aa~~~fGSGW 132 (205)
T 1ma1_A 108 KDFGSFERFRKEFSQAAISAEGSGW 132 (205)
T ss_dssp HHHSSHHHHHHHHHHHHHTCSSSEE
T ss_pred HhhCCHHHHHHHHHHHHhhCCCCeE
Confidence 3358888888888888888999998
No 189
>1b06_A Protein (superoxide dismutase); oxidoreductase; 2.20A {Sulfolobus acidocaldarius} SCOP: a.2.11.1 d.44.1.1 PDB: 1wb8_A* 1wb7_A
Probab=20.83 E-value=80 Score=26.35 Aligned_cols=25 Identities=20% Similarity=0.298 Sum_probs=20.8
Q ss_pred HHhCChhhhHHHHHHHHhhhccCcc
Q 028535 105 KNKGDLTMCSEALLKQVRSYQGSDL 129 (207)
Q Consensus 105 ~~~G~~~~a~EA~LKqVRslqgS~w 129 (207)
+.-|.++.-.+.+.+.--+.+||||
T Consensus 111 ~~FGS~d~fk~~F~~aa~~~fGSGW 135 (210)
T 1b06_A 111 KQYGSFDRFKQVFSESANSLPGSGW 135 (210)
T ss_dssp HHHSSHHHHHHHHHHHHHHCCSSEE
T ss_pred HHhCCHHHHHHHHHHHHhhCCCCeE
Confidence 3358888888888888888999998
No 190
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=20.73 E-value=3.5e+02 Score=22.06 Aligned_cols=64 Identities=9% Similarity=-0.044 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHHHhCChhhhHHHHHHHHhhhccCccccchhHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHhHHH
Q 028535 94 ADMWGLYARWLKNKGDLTMCSEALLKQVRSYQGSDLWKDRDRFKRFSYASLELCKVYMEISSSSGSRRELFAAEMHLKNV 173 (207)
Q Consensus 94 ~diWgLyAryh~~~G~~~~a~EA~LKqVRslqgS~w~kD~~~F~kya~Asl~Lc~vY~ei~s~~G~~reL~sA~MHLk~~ 173 (207)
+.+|..+|..+..+|+++.|.+...+.++--.. ++.+-..++.+|+.. .+...|.-+++..
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~------------~~~a~~~lg~~~~~~-------g~~~~A~~~~~~a 256 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN------------NEKGLSRRGEAHLAV-------NDFELARADFQKV 256 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------------CHHHHHHHHHHHHHT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------------cHHHHHHHHHHHHHC-------CCHHHHHHHHHHH
Confidence 489999999999999999999999998874211 234555666777652 2334555555555
Q ss_pred HHh
Q 028535 174 LKQ 176 (207)
Q Consensus 174 lKq 176 (207)
++.
T Consensus 257 l~l 259 (336)
T 1p5q_A 257 LQL 259 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
Done!