Your job contains 1 sequence.
>028536
MGDSHSYDRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYNFLSFVSN
VLLLLVAILFFWGKSASLLNRPLPPLPDLEISDQSVVKAADEIQVWVNHALSIARDIAMG
RNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRV
IQMQYRKIDESLLKKIPLPQNKQKKTQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028536
(207 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 491 6.9e-47 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 330 7.9e-30 1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 319 1.2e-28 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 317 1.9e-28 1
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 304 4.5e-27 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 282 9.7e-25 1
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 252 2.4e-24 2
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 265 6.1e-23 1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 265 6.1e-23 1
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 135 5.8e-12 2
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 133 9.3e-12 2
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 133 9.3e-12 2
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 158 1.3e-11 1
UNIPROTKB|H7C106 - symbol:RTN4 "Reticulon-4" species:9606... 132 2.4e-11 2
ZFIN|ZDB-GENE-030131-2426 - symbol:rtn1a "reticulon 1a" s... 166 3.4e-11 1
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ... 153 4.5e-11 1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:... 153 4.5e-11 1
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 162 8.2e-11 1
UNIPROTKB|Q1LZ76 - symbol:RTN1 "Uncharacterized protein" ... 150 9.4e-11 1
UNIPROTKB|F1PNX5 - symbol:RTN1 "Uncharacterized protein" ... 150 9.4e-11 1
UNIPROTKB|F1P5B2 - symbol:Gga.4205 "Uncharacterized prote... 135 9.9e-11 2
UNIPROTKB|A8MT72 - symbol:RTN1 "Reticulon-1" species:9606... 148 1.5e-10 1
UNIPROTKB|I3LBH0 - symbol:RTN1 "Uncharacterized protein" ... 148 1.5e-10 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 144 4.9e-10 1
UNIPROTKB|F1NH23 - symbol:RTN1 "Uncharacterized protein" ... 153 7.5e-10 1
RGD|620988 - symbol:Rtn3 "reticulon 3" species:10116 "Rat... 142 7.6e-10 2
ZFIN|ZDB-GENE-030710-1 - symbol:rtn4a "reticulon 4a" spec... 146 9.3e-10 1
UNIPROTKB|A7MC64 - symbol:rtn1 "Reticulon-1" species:8364... 151 1.2e-09 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 142 1.2e-09 1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 142 1.2e-09 1
UNIPROTKB|E1BP30 - symbol:E1BP30 "Uncharacterized protein... 150 1.4e-09 1
UNIPROTKB|F1Q231 - symbol:RTN1 "Uncharacterized protein" ... 150 1.4e-09 1
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein... 143 1.6e-09 1
UNIPROTKB|F1Q2B3 - symbol:RTN1 "Uncharacterized protein" ... 149 1.8e-09 1
RGD|620986 - symbol:Rtn1 "reticulon 1" species:10116 "Rat... 149 2.1e-09 1
MGI|MGI:1933947 - symbol:Rtn1 "reticulon 1" species:10090... 149 2.1e-09 1
UNIPROTKB|I3L6J1 - symbol:RTN1 "Uncharacterized protein" ... 148 2.6e-09 1
UNIPROTKB|Q16799 - symbol:RTN1 "Reticulon-1" species:9606... 148 2.6e-09 1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 141 3.4e-09 1
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 140 5.1e-09 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 101 5.7e-09 2
UNIPROTKB|F1N405 - symbol:RTN4 "Uncharacterized protein" ... 133 7.4e-09 2
UNIPROTKB|Q5MY90 - symbol:rtn1-b "Reticulon-1-B" species:... 142 1.1e-08 1
UNIPROTKB|F1PVP5 - symbol:F1PVP5 "Uncharacterized protein... 143 1.3e-08 1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606... 136 1.4e-08 1
UNIPROTKB|F5H774 - symbol:RTN3 "Reticulon-3" species:9606... 142 1.4e-08 1
MGI|MGI:1339970 - symbol:Rtn3 "reticulon 3" species:10090... 142 1.5e-08 1
UNIPROTKB|Q1RMR8 - symbol:RTN4 "RTN4 protein" species:991... 136 1.7e-08 1
UNIPROTKB|O95197 - symbol:RTN3 "Reticulon-3" species:9606... 142 1.7e-08 1
UNIPROTKB|F1NNJ7 - symbol:Gga.4205 "Uncharacterized prote... 139 1.9e-08 1
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p... 127 2.6e-08 1
MGI|MGI:1915835 - symbol:Rtn4 "reticulon 4" species:10090... 139 4.0e-08 1
UNIPROTKB|F1NCP4 - symbol:Gga.4205 "Uncharacterized prote... 139 4.1e-08 1
UNIPROTKB|F8WAM4 - symbol:RTN4 "Reticulon-4" species:9606... 137 5.2e-08 1
UNIPROTKB|D4AEM9 - symbol:Rtn4 "Reticulon-4" species:1011... 137 5.8e-08 1
RGD|620989 - symbol:Rtn4 "reticulon 4" species:10116 "Rat... 137 6.6e-08 1
UNIPROTKB|F1LQN3 - symbol:Rtn4 "Reticulon-4" species:1011... 137 6.6e-08 1
UNIPROTKB|Q9NQC3 - symbol:RTN4 "Reticulon-4" species:9606... 137 6.8e-08 1
UNIPROTKB|E2R925 - symbol:RTN4 "Uncharacterized protein" ... 136 8.6e-08 1
UNIPROTKB|J9P0R7 - symbol:RTN4 "Uncharacterized protein" ... 136 8.7e-08 1
UNIPROTKB|K7EMR7 - symbol:RTN2 "Reticulon-2" species:9606... 110 1.6e-06 2
ZFIN|ZDB-GENE-060331-95 - symbol:rtn2b "reticulon 2b" spe... 121 2.3e-06 1
ZFIN|ZDB-GENE-060420-1 - symbol:rtn2a "reticulon 2a" spec... 120 3.1e-06 1
ZFIN|ZDB-GENE-030710-5 - symbol:rtn3 "reticulon 3" specie... 121 3.8e-06 1
UNIPROTKB|O75298 - symbol:RTN2 "Reticulon-2" species:9606... 110 1.5e-05 2
RGD|1303245 - symbol:Rtn2 "reticulon 2" species:10116 "Ra... 119 3.2e-05 1
UNIPROTKB|F1LM00 - symbol:Rtn2 "Protein Rtn2" species:101... 119 3.2e-05 1
ZFIN|ZDB-GENE-030710-2 - symbol:rtn4b "reticulon 4b" spec... 120 3.4e-05 2
MGI|MGI:107612 - symbol:Rtn2 "reticulon 2 (Z-band associa... 118 4.5e-05 1
UNIPROTKB|F6S165 - symbol:RTN2 "Uncharacterized protein" ... 112 0.00017 2
UNIPROTKB|Q0P586 - symbol:RTN2 "Uncharacterized protein" ... 112 0.00028 1
WB|WBGene00004336 - symbol:ret-1 species:6239 "Caenorhabd... 118 0.00046 1
UNIPROTKB|E2RDR4 - symbol:RTN2 "Uncharacterized protein" ... 109 0.00069 1
TAIR|locus:2057786 - symbol:3BETAHSD/D2 "3beta-hydroxyste... 109 0.00085 1
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 98/198 (49%), Positives = 131/198 (66%)
Query: 11 SVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF 70
SVHQ++ GSVAD+++W+ R GG +LLGS+T+LWFLFE+ GY ILF
Sbjct: 4 SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63
Query: 71 FWGKSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVA 130
W KSA EI+++ V AD I+VW+N L++AR+I +GRN + +V+
Sbjct: 64 LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123
Query: 131 FLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDE 190
+LW VS+VG+ NFLT++Y+GV+LSL +P LYE++QD IDEKL RVIQ QYRKIDE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183
Query: 191 SLLKKI-PLPQNKQKKTQ 207
LL+KI P NK KK Q
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 73/194 (37%), Positives = 103/194 (53%)
Query: 12 VHQALGGGSVADVLLWR-KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF 70
VH+ LGGG ADV LWR K+ G VL G +T +W LFE Y LF
Sbjct: 59 VHKVLGGGKPADVFLWRDKKLSGAVL-GVATAIWVLFELVEYHLLSLLCHISILALGGLF 117
Query: 71 FWGKSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVA 130
W + + + +++ + A ++ +N A I R IA+GR+L +FL V
Sbjct: 118 LWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVV 177
Query: 131 FLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDE 190
LW++S VG+ FNFLTLVYI ++ +VP+LYEK +D +D K + +Q QY DE
Sbjct: 178 VGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE 237
Query: 191 SLLKKIPLPQNKQK 204
+L KIP+ K K
Sbjct: 238 KVLSKIPIASLKAK 251
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 69/196 (35%), Positives = 103/196 (52%)
Query: 12 VHQALGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAIL 69
VH+ LGGG AD+ +W+ K GGV LG +T W +FE Y A+L
Sbjct: 80 VHKVLGGGKPADIFMWKNKKMSGGV--LGGATAAWVVFELMEYHLLTLLCHVMIVVLAVL 137
Query: 70 FFWGKSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W + I ++ +++ A +++ +N S R+IA GR+L +FL
Sbjct: 138 FLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIA 197
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LWV+S +G FNFLTL YI ++L +VP+ Y+K++D +D K ++ QY +D
Sbjct: 198 IAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLD 257
Query: 190 ESLLKKIPLPQNKQKK 205
E +L KIPL K KK
Sbjct: 258 EKVLSKIPLGPLKNKK 273
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 69/200 (34%), Positives = 108/200 (54%)
Query: 12 VHQALGGGSVADVLLWRKR--CGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAIL 69
VH+ LGGG AD+ LWR + GGV LG+ T W LFE Y A L
Sbjct: 59 VHKVLGGGKPADIFLWRNKKVSGGV--LGAVTASWVLFELFEYHLLAFLCHFAIFALAAL 116
Query: 70 FFWGKSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W + + I + +++ +++ +N L++ R+IA G+++ +F+ V
Sbjct: 117 FLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILV 176
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LWV+S +GS +NFLTL Y +L ++PVLYEK++D +D K R I+ QY +D
Sbjct: 177 IAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLD 236
Query: 190 ESLLKKI--PLPQ---NKQK 204
E +L+K+ +P+ NK+K
Sbjct: 237 EKVLRKVISKIPRGALNKKK 256
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 63/196 (32%), Positives = 101/196 (51%)
Query: 12 VHQALGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAIL 69
VH+ LGGG AD+ +W+ K GGV G +T+ W LFE Y A+L
Sbjct: 76 VHKVLGGGKPADIFMWKDKKMSGGV--FGGATVAWVLFELMEYHLLTLLCHVMIVALAVL 133
Query: 70 FFWGKSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W + I ++ +++ A +++ +N +S R+IA GR++ +FL
Sbjct: 134 FLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSA 193
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
LWV+S +G ++FLTL YI ++L +VP+ Y+K++D +D K ++ QY +D
Sbjct: 194 IAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLD 253
Query: 190 ESLLKKIPLPQNKQKK 205
+ KIP K KK
Sbjct: 254 AKVFSKIPRGPLKDKK 269
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 61/196 (31%), Positives = 97/196 (49%)
Query: 11 SVHQALGGGSVADVLLWRK-RCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAIL 69
S+H GGG VAD+LLWR+ + +++G S ILWFL E Y
Sbjct: 29 SIHSIFGGGKVADILLWREPKIAATLVIGVS-ILWFLMEVVEYNFITLICHASMTSMLFF 87
Query: 70 FFWGKSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
F W ++ + + S + A V N L+ D+A GR+ F
Sbjct: 88 FIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLT 147
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
L++VS +G+ FNF+ L++IG + ++PV+YE ++D +D K+ R ++ Y+K+D
Sbjct: 148 TISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVD 207
Query: 190 ESLLKKIPLPQNKQKK 205
++L KIP K KK
Sbjct: 208 TNVLSKIPRGTVKNKK 223
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 252 (93.8 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 57/187 (30%), Positives = 98/187 (52%)
Query: 22 ADVLLWRKR--CGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILFFWGKSASXX 79
AD+LLWR+R GV+++ ST+ W +FE +G I F + ++
Sbjct: 64 ADLLLWRRRHLSLGVIII--STVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFR 121
Query: 80 XXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL-QVAFLLWVVSY 138
+S++ V AA ++ +NH L +A D+ +G + F QV LW++S
Sbjct: 122 NRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSA 181
Query: 139 VGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLC-KIQRVIQMQYRKIDESLLKKIP 197
+GS + TL+YIG +LS+++P LY K+Q +D K C I R + Y+ +DE+++ ++
Sbjct: 182 IGSYISLCTLLYIGTILSVTIPALYSKYQSKVD-KCCGTIHRRLSHHYKIVDENVISRLS 240
Query: 198 LPQNKQK 204
+K K
Sbjct: 241 WSLSKDK 247
Score = 41 (19.5 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 9 RISVHQALGGG 19
+I+VHQ +GGG
Sbjct: 29 QITVHQFMGGG 39
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 61/138 (44%), Positives = 79/138 (57%)
Query: 20 SVADVLLWRKRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILFFWGKSASXX 79
+VAD+LLWR R G V+LL SST WFLFERAGY AI F W KSA+
Sbjct: 5 AVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVL 64
Query: 80 XXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFL-LWVVSY 138
EI ++ KAAD+++VW+N+ LSIA DI + RN R LQV F LW
Sbjct: 65 NRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQT-- 122
Query: 139 VGSVFNFLTLVYIGVLLS 156
+ +F FL ++Y+ V +S
Sbjct: 123 ICCIFLFLHVMYLTVHIS 140
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 42/80 (52%), Positives = 58/80 (72%)
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
QV+ +LW +SYVG++ N LTLVYIGVLLSLS P++YEK+QDHIDEK+ + ++
Sbjct: 147 QVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFVR----- 201
Query: 188 IDESLLKKIPLPQNKQKKTQ 207
++ +K PLP NK+KK Q
Sbjct: 202 ---NISRKFPLPINKEKKHQ 218
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 56/163 (34%), Positives = 92/163 (56%)
Query: 8 DRISVHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXA 67
DR ++H+ LGGG VADV+LWRK+ V ++ + W +FE Y +
Sbjct: 12 DR-TIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLS 70
Query: 68 ILFFWGKSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
ILF W KSAS +IS+ +A+ +++ VN L ++ DIAM R+ +
Sbjct: 71 ILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYT 130
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHI 170
+VA L+++S +GS+ +F TL + VL+ ++VP YE+++D+I
Sbjct: 131 KVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 135 (52.6 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 30/102 (29%), Positives = 57/102 (55%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S++ + K + + +N + R + + +L L+ A L+WV +YVG++FN LTL+
Sbjct: 90 VSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLI 149
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ ++ SVPV+YE+ Q ID L + + ++ KI +
Sbjct: 150 LALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 191
Score = 39 (18.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTIL 43
V D+L WR K+ G V+ G+S L
Sbjct: 12 VVDLLYWRDIKKTG--VVFGASLFL 34
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 133 (51.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
IS++ V K ++ VN + R + + +L L+ A L+WV +YVG++FN LTL+
Sbjct: 90 ISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLI 149
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ ++ SVPV+YE+ Q ID L + ++ KI +
Sbjct: 150 LALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 191
Score = 39 (18.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTIL 43
V D+L WR K+ G V+ G+S L
Sbjct: 12 VVDLLYWRDIKKTG--VVFGASLFL 34
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 133 (51.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
IS++ V K ++ VN + R + + +L L+ A L+WV +YVG++FN LTL+
Sbjct: 90 ISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLI 149
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ ++ SVPV+YE+ Q ID L + ++ KI +
Sbjct: 150 LALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 191
Score = 39 (18.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTIL 43
V D+L WR K+ G V+ G+S L
Sbjct: 12 VVDLLYWRDIKKTG--VVFGASLFL 34
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/188 (21%), Positives = 81/188 (43%)
Query: 21 VADVLLWRKRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILFFWGKSASXXX 80
V D+ LWR++ L ST W L G+ +++F WG
Sbjct: 16 VEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLS 75
Query: 81 XXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVG 140
E+S++ VV+ ++ + + + F + W++S +G
Sbjct: 76 KVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIG 135
Query: 141 SVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLK-KIPLP 199
++ +F T ++IG+++ L+VP L+E++ D I + L ++ + Y E +L+ K L
Sbjct: 136 NLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILEMKNKLH 195
Query: 200 QNKQKKTQ 207
++K +
Sbjct: 196 HGTEEKVK 203
>UNIPROTKB|H7C106 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 ProteinModelPortal:H7C106 PRIDE:H7C106
Ensembl:ENST00000438462 OMA:NWKCQAI Uniprot:H7C106
Length = 203
Score = 132 (51.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
IS++ V K ++ VN + R + + +L L+ A L+WV +YVG++FN LTL+
Sbjct: 107 ISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLI 166
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKL 174
+ ++ SVPV+YE+ Q ID L
Sbjct: 167 LALISLFSVPVIYERHQAQIDHYL 190
Score = 39 (18.8 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTIL 43
V D+L WR K+ G V+ G+S L
Sbjct: 29 VVDLLYWRDIKKTG--VVFGASLFL 51
>ZFIN|ZDB-GENE-030131-2426 [details] [associations]
symbol:rtn1a "reticulon 1a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-030131-2426 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG008971 GeneTree:ENSGT00390000009934
EMBL:BX072537 EMBL:AY555044 IPI:IPI00613432 RefSeq:NP_001025138.2
UniGene:Dr.77106 SMR:Q4G5V7 Ensembl:ENSDART00000076574
GeneID:323706 KEGG:dre:323706 CTD:323706 InParanoid:Q4G5V7
OMA:ISHGEER NextBio:20808397 Uniprot:Q4G5V7
Length = 818
Score = 166 (63.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 36/113 (31%), Positives = 67/113 (59%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + K D+ Q+++N + R + + ++L ++ A L+W+++YVG++FN LTL+
Sbjct: 710 LSADQISKYVDKTQLYINTTMKELRRLFLVQDLVDSIKFAVLMWLLTYVGALFNGLTLLI 769
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPLPQNKQ 203
+ V+ SVPV+YEK+Q ID+ L ++ + KI E K+P + K+
Sbjct: 770 LAVISMFSVPVVYEKYQTQIDQYLGLVRTQVNSVMGKIRE----KVPGAKKKE 818
>UNIPROTKB|F1NH22 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
ArrayExpress:F1NH22 Uniprot:F1NH22
Length = 208
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 32/102 (31%), Positives = 61/102 (59%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + K D +Q++VN + R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 99 LSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLI 158
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y+K+Q ID+ L ++ I KI +
Sbjct: 159 MAVVSMFTLPVVYDKYQAQIDQYLGLVRTHINTVVAKIQAKI 200
>UNIPROTKB|Q6IFY7 [details] [associations]
symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
Uniprot:Q6IFY7
Length = 207
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 35/113 (30%), Positives = 65/113 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +QV+ N R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 99 LSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLI 158
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPLPQNKQ 203
+ V+ S+PV+Y+K+Q ID+ L +++ I + KIP + K+
Sbjct: 159 MAVVSMFSLPVVYDKYQAQIDQYL----GLVRTNMNTIMTKIQAKIPGTKQKE 207
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 162 (62.1 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 34/102 (33%), Positives = 62/102 (60%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + K A+ +Q ++N L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 658 LSHDQMQKYAENVQYYINSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLI 717
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ S+PV+YEK+Q ID+ + I+ + KI E +
Sbjct: 718 MVVVCMFSMPVVYEKYQAQIDQYVDLIRTQVNSVVAKIQEKV 759
>UNIPROTKB|Q1LZ76 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:DAAA02029288
EMBL:DAAA02029289 EMBL:BC116162 IPI:IPI00904153 UniGene:Bt.22982
SMR:Q1LZ76 STRING:Q1LZ76 Ensembl:ENSBTAT00000015218
NextBio:20875732 Uniprot:Q1LZ76
Length = 208
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 33/102 (32%), Positives = 60/102 (58%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN+ L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 99 LSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 158
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 159 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKI 200
>UNIPROTKB|F1PNX5 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:DPKKSGI
EMBL:AAEX03005762 Ensembl:ENSCAFT00000024693 Uniprot:F1PNX5
Length = 208
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 33/102 (32%), Positives = 60/102 (58%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN+ L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 99 LSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 158
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 159 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKIQAKI 200
>UNIPROTKB|F1P5B2 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00594028 Ensembl:ENSGALT00000040233 ArrayExpress:F1P5B2
Uniprot:F1P5B2
Length = 344
Score = 135 (52.6 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 30/102 (29%), Positives = 57/102 (55%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S++ + K + + +N + R + + +L L+ A L+WV +YVG++FN LTL+
Sbjct: 235 VSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLI 294
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ ++ SVPV+YE+ Q ID L + + ++ KI +
Sbjct: 295 LALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKI 336
Score = 40 (19.1 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTIL 43
+V D+L WR K+ G V+ G+S L
Sbjct: 156 AVVDLLYWRDIKKTG--VVFGASLFL 179
>UNIPROTKB|A8MT72 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 HGNC:HGNC:10467 ChiTaRS:RTN1
HOGENOM:HOG000015254 EMBL:AL121694 EMBL:AL133299 EMBL:AL139194
IPI:IPI00794113 ProteinModelPortal:A8MT72 SMR:A8MT72 STRING:A8MT72
PRIDE:A8MT72 Ensembl:ENST00000395090 UCSC:uc010apl.2
ArrayExpress:A8MT72 Bgee:A8MT72 Uniprot:A8MT72
Length = 193
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/102 (32%), Positives = 59/102 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 84 LSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 143
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 144 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKI 185
>UNIPROTKB|I3LBH0 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 CTD:6252 GeneTree:ENSGT00390000009934
EMBL:CU469078 EMBL:FP340567 UniGene:Ssc.13916 GeneID:100152394
KEGG:ssc:100152394 RefSeq:NP_001231570.1 RefSeq:XP_003480527.1
ProteinModelPortal:I3LBH0 SMR:I3LBH0 Ensembl:ENSSSCT00000032115
Uniprot:I3LBH0
Length = 208
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/102 (32%), Positives = 59/102 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 99 LSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 158
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 159 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKI 200
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 144 (55.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 33/107 (30%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V +N AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 126 LSSEAFHNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 185
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVPV+YEK++ ID + + + Q + I E + K+P
Sbjct: 186 LAELLIFSVPVVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKVP 228
>UNIPROTKB|F1NH23 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 OMA:PFLNKQK GeneTree:ENSGT00390000009934
EMBL:AADN02003912 EMBL:AADN02003911 IPI:IPI00586633
Ensembl:ENSGALT00000019593 ArrayExpress:F1NH23 Uniprot:F1NH23
Length = 760
Score = 153 (58.9 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 32/102 (31%), Positives = 61/102 (59%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + K D +Q++VN + R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 651 LSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLI 710
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y+K+Q ID+ L ++ I KI +
Sbjct: 711 MAVVSMFTLPVVYDKYQAQIDQYLGLVRTHINTVVAKIQAKI 752
>RGD|620988 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization"
evidence=IEA;ISO] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
CTD:10313 eggNOG:NOG303514 HOVERGEN:HBG093922 EMBL:AY164698
EMBL:AY496443 EMBL:AF442357 EMBL:AF442358 EMBL:BC062068
EMBL:BC107448 IPI:IPI00421904 IPI:IPI00564622 RefSeq:NP_001009953.2
RefSeq:NP_543185.2 UniGene:Rn.11652 ProteinModelPortal:Q6RJR6
SMR:Q6RJR6 IntAct:Q6RJR6 STRING:Q6RJR6 PRIDE:Q6RJR6
Ensembl:ENSRNOT00000028785 Ensembl:ENSRNOT00000049812 GeneID:140945
KEGG:rno:140945 UCSC:RGD:620988 HOGENOM:HOG000154220 NextBio:620854
ArrayExpress:Q6RJR6 Genevestigator:Q6RJR6 Uniprot:Q6RJR6
Length = 940
Score = 142 (55.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 33/107 (30%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V VN AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 830 LSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 889
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVP++YEK++ ID + + + Q + I E + K+P
Sbjct: 890 LAELLVFSVPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 932
Score = 37 (18.1 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 17 GGGSV-ADVLLWRKRCGGVVLLGSSTI 42
GGGS A L K CG +G S++
Sbjct: 28 GGGSPGACPALGAKSCGSSCAVGLSSL 54
>ZFIN|ZDB-GENE-030710-1 [details] [associations]
symbol:rtn4a "reticulon 4a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0002040 "sprouting angiogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IGI;IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-1 GO:GO:0005783 GO:GO:0007411 GO:GO:0002040
GO:GO:0048936 PANTHER:PTHR10994 HOVERGEN:HBG000838
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BX324134
EMBL:AY555039 IPI:IPI00650155 RefSeq:NP_001073381.1
UniGene:Dr.121711 UniGene:Dr.47577 SMR:Q4G5W2 STRING:Q4G5W2
Ensembl:ENSDART00000081966 GeneID:447816 KEGG:dre:447816 CTD:447816
InParanoid:Q4G5W2 NextBio:20832340 Uniprot:Q4G5W2
Length = 322
Score = 146 (56.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 94 QSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGV 153
+ V K +D V +N + R + + +L L+ A L+W+++YVG++FN LTL+ +G
Sbjct: 216 EMVHKYSDSTLVHINTVIKELRRLFLVEDLVDSLKFAVLMWILTYVGALFNGLTLIILGF 275
Query: 154 LLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ + S PV+YEK Q ID ++ Q++ + + KIP
Sbjct: 276 IGAFSCPVIYEKHQAQIDH----YYGLVNKQFKDVVGKIQAKIP 315
>UNIPROTKB|A7MC64 [details] [associations]
symbol:rtn1 "Reticulon-1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994
HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BC118846
EMBL:BC152060 EMBL:AL635298 EMBL:BK004008 RefSeq:NP_001078819.2
UniGene:Str.40113 ProteinModelPortal:A7MC64 SMR:A7MC64
STRING:A7MC64 Ensembl:ENSXETT00000037003 GeneID:677736
KEGG:xtr:677736 Xenbase:XB-GENE-1011333 Bgee:A7MC64 Uniprot:A7MC64
Length = 764
Score = 151 (58.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 34/113 (30%), Positives = 65/113 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q + N + R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 656 LSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLI 715
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPLPQNKQ 203
+ V+ S+PV+Y+K+Q ID+ L +++ I + KIP + K+
Sbjct: 716 MAVVSMFSLPVVYDKYQAQIDQYL----GLVRTNMNTIVTKIQAKIPGTKQKE 764
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 142 (55.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 31/107 (28%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V +N AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 146 LSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 205
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL S+P++YEK++ ID + + + Q + I E + K+P
Sbjct: 206 LAELLVFSIPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 248
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 142 (55.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 33/107 (30%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V VN AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 146 LSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 205
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVP++YEK++ ID + + + Q + I E + K+P
Sbjct: 206 LAELLVFSVPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 248
>UNIPROTKB|E1BP30 [details] [associations]
symbol:E1BP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:DAAA02029288 EMBL:DAAA02029289
IPI:IPI00924046 Ensembl:ENSBTAT00000061568 ArrayExpress:E1BP30
Uniprot:E1BP30
Length = 697
Score = 150 (57.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/102 (32%), Positives = 60/102 (58%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN+ L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 588 LSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 647
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 648 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKI 689
>UNIPROTKB|F1Q231 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000024697 Uniprot:F1Q231
Length = 704
Score = 150 (57.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/102 (32%), Positives = 60/102 (58%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN+ L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 595 LSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 654
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 655 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKIQAKI 696
>UNIPROTKB|J9P9U4 [details] [associations]
symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
Uniprot:J9P9U4
Length = 296
Score = 143 (55.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V +N AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 186 LSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 245
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVP++YEK++ ID + + + Q + I E + K+P
Sbjct: 246 LAELLIFSVPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 288
>UNIPROTKB|F1Q2B3 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000039479 Uniprot:F1Q2B3
Length = 715
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 33/99 (33%), Positives = 59/99 (59%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN+ L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 600 LSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 659
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
+ V+ ++PV+Y K Q ID+ L ++ I K D
Sbjct: 660 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKSD 698
>RGD|620986 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=ISO] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 RGD:620986 GO:GO:0016021 GO:GO:0030182
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252
eggNOG:NOG306139 OrthoDB:EOG437RDX GeneTree:ENSGT00390000009934
EMBL:U17604 EMBL:U17603 IPI:IPI00213559 IPI:IPI00231126
RefSeq:NP_446317.1 UniGene:Rn.55126 ProteinModelPortal:Q64548
SMR:Q64548 STRING:Q64548 PRIDE:Q64548 Ensembl:ENSRNOT00000006373
GeneID:116644 KEGG:rno:116644 UCSC:RGD:620986 HOGENOM:HOG000015254
NextBio:619379 Genevestigator:Q64548 Uniprot:Q64548
Length = 777
Score = 149 (57.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 32/102 (31%), Positives = 60/102 (58%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q++VN L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 668 LSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 727
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q +D+ L ++ I KI +
Sbjct: 728 MAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQAKI 769
>MGI|MGI:1933947 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1933947
GO:GO:0005783 GO:GO:0016021 GO:GO:0030182 GO:GO:0005789
PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
HOGENOM:HOG000134444 OrthoDB:EOG437RDX ChiTaRS:RTN1 EMBL:AB074899
EMBL:BC030455 EMBL:BC053926 EMBL:BC058579 EMBL:BK001694
IPI:IPI00395193 RefSeq:NP_001007597.1 RefSeq:NP_703187.2
UniGene:Mm.221275 ProteinModelPortal:Q8K0T0 SMR:Q8K0T0
IntAct:Q8K0T0 STRING:Q8K0T0 PhosphoSite:Q8K0T0 PaxDb:Q8K0T0
PRIDE:Q8K0T0 Ensembl:ENSMUST00000078505 GeneID:104001
KEGG:mmu:104001 GeneTree:ENSGT00390000009934 InParanoid:Q8K0T0
NextBio:356325 Bgee:Q8K0T0 CleanEx:MM_RTN1 Genevestigator:Q8K0T0
GermOnline:ENSMUSG00000021087 Uniprot:Q8K0T0
Length = 780
Score = 149 (57.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 32/102 (31%), Positives = 60/102 (58%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q++VN L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 671 LSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 730
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q +D+ L ++ I KI +
Sbjct: 731 MAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQAKI 772
>UNIPROTKB|I3L6J1 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 CTD:6252 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:CU469078 EMBL:FP340567
RefSeq:NP_001231569.1 RefSeq:XP_003480528.1 UniGene:Ssc.13916
Ensembl:ENSSSCT00000022854 GeneID:100152394 KEGG:ssc:100152394
Uniprot:I3L6J1
Length = 770
Score = 148 (57.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 33/102 (32%), Positives = 59/102 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 661 LSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 720
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 721 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKI 762
>UNIPROTKB|Q16799 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 EMBL:CH471061 GO:GO:0030182 GO:GO:0004871
GO:GO:0030176 PANTHER:PTHR10994 HOVERGEN:HBG008971 EMBL:L10333
EMBL:L10334 EMBL:L10335 EMBL:BC090862 EMBL:BC000314 EMBL:BC003003
IPI:IPI00003971 IPI:IPI00219812 IPI:IPI00219813 PIR:A46583
PIR:I60904 RefSeq:NP_066959.1 RefSeq:NP_996734.1 UniGene:Hs.368626
ProteinModelPortal:Q16799 SMR:Q16799 IntAct:Q16799 MINT:MINT-154554
STRING:Q16799 PhosphoSite:Q16799 DMDM:12643733 PaxDb:Q16799
PRIDE:Q16799 Ensembl:ENST00000267484 Ensembl:ENST00000342503
GeneID:6252 KEGG:hsa:6252 UCSC:uc001xek.2 UCSC:uc001xem.1
UCSC:uc001xen.1 CTD:6252 GeneCards:GC14M060062 HGNC:HGNC:10467
HPA:CAB002745 MIM:600865 neXtProt:NX_Q16799 PharmGKB:PA34880
eggNOG:NOG306139 HOGENOM:HOG000134444 InParanoid:Q16799 OMA:PFLNKQK
OrthoDB:EOG437RDX PhylomeDB:Q16799 ChiTaRS:RTN1 GenomeRNAi:6252
NextBio:24277 ArrayExpress:Q16799 Bgee:Q16799 CleanEx:HS_RTN1
Genevestigator:Q16799 GermOnline:ENSG00000139970 Uniprot:Q16799
Length = 776
Score = 148 (57.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 33/102 (32%), Positives = 59/102 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K D +Q +VN L R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 667 LSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLL 726
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ V+ ++PV+Y K Q ID+ L ++ I KI +
Sbjct: 727 MAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKI 768
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 141 (54.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 47/185 (25%), Positives = 80/185 (43%)
Query: 18 GGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG 73
G +V D+L WR K+ G V+ G+S L I F + G
Sbjct: 136 GSAVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKG 193
Query: 74 ------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
KS +S++ + K + + +N + R + + +L L
Sbjct: 194 VIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSL 253
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + + ++ K
Sbjct: 254 KFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAK 313
Query: 188 IDESL 192
I +
Sbjct: 314 IQAKI 318
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 140 (54.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 19 GSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG- 73
G++ D+L WR K+ G V+ G+S L I F + G
Sbjct: 158 GNIVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGV 215
Query: 74 -----KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQ 128
KS +S++ + K + + +N + R + + +L L+
Sbjct: 216 IQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLK 275
Query: 129 VAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKI 188
A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + + ++ KI
Sbjct: 276 FAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKI 335
Query: 189 DESL 192
+
Sbjct: 336 QAKI 339
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 101 (40.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 12 VHQALGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGY 52
VH+ LGGG ADV LWR + +LG +T +W LFE Y
Sbjct: 59 VHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEY 99
Score = 86 (35.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 124 SRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQM 183
S ++ ++ W V +G L V+L +VP+LYEK +D +D K + ++
Sbjct: 183 SIYIGISGGFWAVDNLGCGKLVQLLDSCFVVLH-TVPMLYEKHEDKVDPVAEKTLKELKK 241
Query: 184 QYRKIDESLLKKIPLPQNKQK 204
Y DE +L K+P+ K K
Sbjct: 242 HYMVFDEKVLSKLPVASLKAK 262
>UNIPROTKB|F1N405 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000172 "regulation of branching morphogenesis of a
nerve" evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IEA] [GO:0060317 "cardiac epithelial
to mesenchymal transition" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 OMA:HTSENKT
EMBL:DAAA02030906 EMBL:DAAA02030907 IPI:IPI00705603
Ensembl:ENSBTAT00000014745 ArrayExpress:F1N405 Uniprot:F1N405
Length = 1202
Score = 133 (51.9 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
IS++ V K ++ VN + R + + +L L+ A L+WV +YVG++FN LTL+
Sbjct: 1093 ISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLI 1152
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL 192
+ ++ SVPV+YE+ Q ID L + ++ KI +
Sbjct: 1153 LALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKI 1194
Score = 39 (18.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 21 VADVLLWR--KRCGGVVLLGSSTIL 43
V D+L WR K+ G V+ G+S L
Sbjct: 1015 VVDLLYWRDIKKTG--VVFGASLFL 1037
>UNIPROTKB|Q5MY90 [details] [associations]
symbol:rtn1-b "Reticulon-1-B" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY484582
EMBL:AF498369 EMBL:BC084108 EMBL:CD326067 EMBL:BK004058
RefSeq:NP_001089011.1 UniGene:Xl.8555 ProteinModelPortal:Q5MY90
SMR:Q5MY90 GeneID:496397 KEGG:xla:496397 CTD:496397
Xenbase:XB-GENE-1011340 HOVERGEN:HBG008971 Uniprot:Q5MY90
Length = 752
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/113 (30%), Positives = 64/113 (56%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S + + K Q++ N R + + ++L L+ A L+W+++YVG++FN LTL+
Sbjct: 644 LSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLI 703
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIPLPQNKQ 203
+ V+ S+PV+Y+K+Q ID+ L ++ + + KI KIP + K+
Sbjct: 704 MAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNIIVTKIQA----KIPGTKQKE 752
>UNIPROTKB|F1PVP5 [details] [associations]
symbol:F1PVP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03011658
EMBL:AAEX03011657 Ensembl:ENSCAFT00000023909 Uniprot:F1PVP5
Length = 1042
Score = 143 (55.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V +N AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 932 LSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 991
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVP++YEK++ ID + + + Q + I E + K+P
Sbjct: 992 LAELLIFSVPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 1034
>UNIPROTKB|F8W914 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
Length = 345
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 50/185 (27%), Positives = 78/185 (42%)
Query: 18 GGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG 73
G V D+L WR K+ G V+ G+S L I F + G
Sbjct: 155 GSVVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKG 212
Query: 74 ------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
KS IS++ V K ++ VN + R + + +L L
Sbjct: 213 VIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSL 272
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + ++ K
Sbjct: 273 KFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 332
Query: 188 IDESL 192
I +
Sbjct: 333 IQAKI 337
>UNIPROTKB|F5H774 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AP006289 PANTHER:PTHR10994 CTD:10313 EMBL:AP000753
RefSeq:NP_001252519.1 UniGene:Hs.473761 GeneID:10313 KEGG:hsa:10313
HGNC:HGNC:10469 ChiTaRS:RTN3 IPI:IPI01009279
ProteinModelPortal:F5H774 SMR:F5H774 Ensembl:ENST00000540798
UCSC:uc009yov.3 ArrayExpress:F5H774 Bgee:F5H774 Uniprot:F5H774
Length = 920
Score = 142 (55.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V +N AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 810 LSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 869
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVP++YEK++ ID + + + Q + I E + K+P
Sbjct: 870 LAELLIFSVPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 912
>MGI|MGI:1339970 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1339970
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 CTD:10313 eggNOG:NOG303514
OrthoDB:EOG4229M0 HOVERGEN:HBG093922 ChiTaRS:RTN3 EMBL:AB046114
EMBL:BK001796 EMBL:AY164700 EMBL:AY507126 EMBL:AY507127
EMBL:AY427822 EMBL:AY750849 EMBL:AF195940 EMBL:AK032109
EMBL:AK036892 EMBL:AK049845 EMBL:AK075883 EMBL:AK088670
EMBL:AK146505 EMBL:AK148792 EMBL:AK148947 EMBL:AK165683
EMBL:BC014697 EMBL:BC036717 EMBL:BC079882 IPI:IPI00112948
IPI:IPI00470981 IPI:IPI00474993 IPI:IPI00480414 IPI:IPI00750847
RefSeq:NP_001003933.1 RefSeq:NP_001003934.1 RefSeq:NP_001258415.1
RefSeq:NP_001258416.1 RefSeq:NP_444306.1 UniGene:Mm.246990
ProteinModelPortal:Q9ES97 SMR:Q9ES97 IntAct:Q9ES97 STRING:Q9ES97
PhosphoSite:Q9ES97 PaxDb:Q9ES97 PRIDE:Q9ES97
Ensembl:ENSMUST00000025667 Ensembl:ENSMUST00000065304
Ensembl:ENSMUST00000088169 Ensembl:ENSMUST00000088171 GeneID:20168
KEGG:mmu:20168 UCSC:uc008glb.1 UCSC:uc008gld.1 UCSC:uc008gle.1
UCSC:uc012bhv.1 InParanoid:Q9ES97 OMA:LTRQFSH NextBio:297685
Bgee:Q9ES97 CleanEx:MM_RTN3 Genevestigator:Q9ES97
GermOnline:ENSMUSG00000024758 Uniprot:Q9ES97
Length = 964
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 33/107 (30%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V VN AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 854 LSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 913
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVP++YEK++ ID + + + Q + I E + K+P
Sbjct: 914 LAELLVFSVPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 956
>UNIPROTKB|Q1RMR8 [details] [associations]
symbol:RTN4 "RTN4 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
EMBL:BC114748 IPI:IPI00730691 RefSeq:NP_001106692.1
UniGene:Bt.105155 SMR:Q1RMR8 STRING:Q1RMR8
Ensembl:ENSBTAT00000036144 GeneID:359718 KEGG:bta:359718
NextBio:20812748 Uniprot:Q1RMR8
Length = 379
Score = 136 (52.9 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 50/185 (27%), Positives = 78/185 (42%)
Query: 18 GGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG 73
G V D+L WR K+ G V+ G+S L I F + G
Sbjct: 189 GSVVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKG 246
Query: 74 ------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFL 127
KS IS++ V K ++ VN + R + + +L L
Sbjct: 247 VIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSL 306
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + ++ K
Sbjct: 307 KFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 366
Query: 188 IDESL 192
I +
Sbjct: 367 IQAKI 371
>UNIPROTKB|O95197 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0005615
"extracellular space" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 GO:GO:0016021 GO:GO:0006915
GO:GO:0019048 GO:GO:0005615 GO:GO:0000139 GO:GO:0006950
GO:GO:0016192 GO:GO:0005789 EMBL:CH471076 EMBL:AP006289
PANTHER:PTHR10994 GO:GO:0071786 CTD:10313 eggNOG:NOG303514
EMBL:AF059524 EMBL:AF059529 EMBL:AF059525 EMBL:AF059526
EMBL:AF059527 EMBL:AF059528 EMBL:AF119297 EMBL:AY427821
EMBL:AY750848 EMBL:AP000753 EMBL:AK297529 EMBL:AB209771
EMBL:AK075412 EMBL:AK222898 EMBL:AK295361 EMBL:BC000634
EMBL:BC010556 EMBL:BC011394 EMBL:BC022993 EMBL:BC100822
EMBL:BC100823 EMBL:BC105981 EMBL:BC105982 EMBL:BC118628
EMBL:BC118550 EMBL:BK001685 EMBL:BK001681 EMBL:BK001684
IPI:IPI00028946 IPI:IPI00394896 IPI:IPI00398795 IPI:IPI00412154
IPI:IPI00743293 RefSeq:NP_001252518.1 RefSeq:NP_001252519.1
RefSeq:NP_001252520.1 RefSeq:NP_006045.1 RefSeq:NP_958831.1
RefSeq:NP_958832.1 RefSeq:NP_958833.1 UniGene:Hs.473761
ProteinModelPortal:O95197 SMR:O95197 IntAct:O95197 STRING:O95197
PhosphoSite:O95197 PaxDb:O95197 PRIDE:O95197 DNASU:10313
Ensembl:ENST00000339997 Ensembl:ENST00000341307
Ensembl:ENST00000354497 Ensembl:ENST00000356000
Ensembl:ENST00000377819 Ensembl:ENST00000537981 GeneID:10313
KEGG:hsa:10313 UCSC:uc001nxm.3 UCSC:uc001nxn.3 UCSC:uc001nxo.3
UCSC:uc001nxp.3 UCSC:uc001nxq.3 GeneCards:GC11P063448
H-InvDB:HIX0021346 HGNC:HGNC:10469 HPA:HPA015649 HPA:HPA015650
MIM:604249 neXtProt:NX_O95197 PharmGKB:PA34882 HOVERGEN:HBG093922
InParanoid:O95197 OMA:KGRISTW ChiTaRS:RTN3 GenomeRNAi:10313
NextBio:39085 ArrayExpress:O95197 Bgee:O95197 Genevestigator:O95197
GermOnline:ENSG00000133318 Uniprot:O95197
Length = 1032
Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
+S ++ + V +N AL + + + +L L++A +W+++YVG+VFN +TL+
Sbjct: 922 LSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLI 981
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ LL SVP++YEK++ ID + + + Q + I E + K+P
Sbjct: 982 LAELLIFSVPIVYEKYKTQIDHYV----GIARDQTKSIVEKIQAKLP 1024
>UNIPROTKB|F1NNJ7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00680876
Ensembl:ENSGALT00000031997 ArrayExpress:F1NNJ7 Uniprot:F1NNJ7
Length = 659
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 48/187 (25%), Positives = 80/187 (42%)
Query: 16 LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--F 71
L SV D+L WR K+ G V+ G+S L I F +
Sbjct: 467 LNVSSVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIY 524
Query: 72 WG------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSR 125
G KS +S++ + K + + +N + R + + +L
Sbjct: 525 KGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVD 584
Query: 126 FLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQY 185
L+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + + ++
Sbjct: 585 SLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAM 644
Query: 186 RKIDESL 192
KI +
Sbjct: 645 AKIQAKI 651
>UNIPROTKB|G3X7U3 [details] [associations]
symbol:LOC100847649 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
Length = 74
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 128 QVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRK 187
Q+A +W+++YVG+VFN +TL+ + LL S+P++YEK++ ID + + + Q +
Sbjct: 1 QLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYV----GIARDQTKS 56
Query: 188 IDESLLKKIP 197
I E + K+P
Sbjct: 57 IVEKIQAKLP 66
>MGI|MGI:1915835 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=ISO;IMP]
[GO:0010977 "negative regulation of neuron projection development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=IMP] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISO;ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030517 "negative
regulation of axon extension" evidence=ISO;ISS;IMP] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISO] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0043209 "myelin sheath" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=ISO] [GO:0048679 "regulation
of axon regeneration" evidence=ISO] [GO:0050771 "negative
regulation of axonogenesis" evidence=ISO] [GO:0051930 "regulation
of sensory perception of pain" evidence=ISO] [GO:0051960
"regulation of nervous system development" evidence=IMP]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0070571 "negative regulation of neuron projection
regeneration" evidence=ISO] [GO:0071786 "endoplasmic reticulum
tubular network organization" evidence=ISO] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=ISO;IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1915835
GO:GO:0005886 GO:GO:0005635 GO:GO:0043234 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0042995 GO:GO:0060317 GO:GO:0007413
GO:GO:0048709 GO:GO:0043209 GO:GO:0030517 GO:GO:0021553
EMBL:AL929371 UniGene:Mm.445271 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
ChiTaRS:RTN4 GO:GO:0070571 GO:GO:0048679 GO:GO:2000172
EMBL:AY102280 EMBL:AY102284 EMBL:AY102286 EMBL:AF326337
EMBL:AY114152 EMBL:AK220511 EMBL:BC032192 EMBL:BC056373
EMBL:AB073672 EMBL:AK003859 IPI:IPI00120415 IPI:IPI00270767
IPI:IPI00469392 RefSeq:NP_077188.1 RefSeq:NP_918940.1
RefSeq:NP_918943.1 UniGene:Mm.192580 UniGene:Mm.440639
UniGene:Mm.488364 PDB:2KO2 PDBsum:2KO2 ProteinModelPortal:Q99P72
SMR:Q99P72 IntAct:Q99P72 MINT:MINT-188330 STRING:Q99P72
PhosphoSite:Q99P72 PaxDb:Q99P72 PRIDE:Q99P72
Ensembl:ENSMUST00000060992 Ensembl:ENSMUST00000102841
Ensembl:ENSMUST00000102843 GeneID:68585 KEGG:mmu:68585
UCSC:uc007ihk.2 UCSC:uc007ihn.2 InParanoid:Q99P72 OMA:HTSENKT
OrthoDB:EOG4XH010 EvolutionaryTrace:Q99P72 NextBio:327502
Bgee:Q99P72 CleanEx:MM_RTN4 Genevestigator:Q99P72
GermOnline:ENSMUSG00000020458 Uniprot:Q99P72
Length = 1162
Score = 139 (54.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 55/203 (27%), Positives = 86/203 (42%)
Query: 3 DSHSYDR--ISVHQA-LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXX 57
D+ DR +V A L SV D+L WR K+ G V+ G+S L
Sbjct: 954 DTEKEDRSLTAVLSAELNKTSVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTA 1011
Query: 58 XXXXXXXXXAILF--FWG------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNH 109
I F + G KS IS++ V K ++ VN
Sbjct: 1012 YIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNS 1071
Query: 110 ALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDH 169
+ R + + +L L+ A L+WV +YVG++FN LTL+ + ++ S+PV+YE+ Q
Sbjct: 1072 TIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQ 1131
Query: 170 IDEKLCKIQRVIQMQYRKIDESL 192
ID L + ++ KI +
Sbjct: 1132 IDHYLGLANKSVKDAMAKIQAKI 1154
>UNIPROTKB|F1NCP4 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00581683
Ensembl:ENSGALT00000013194 ArrayExpress:F1NCP4 Uniprot:F1NCP4
Length = 1190
Score = 139 (54.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 48/187 (25%), Positives = 80/187 (42%)
Query: 16 LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--F 71
L SV D+L WR K+ G V+ G+S L I F +
Sbjct: 998 LNVSSVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIY 1055
Query: 72 WG------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSR 125
G KS +S++ + K + + +N + R + + +L
Sbjct: 1056 KGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVD 1115
Query: 126 FLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQY 185
L+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + + ++
Sbjct: 1116 SLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAM 1175
Query: 186 RKIDESL 192
KI +
Sbjct: 1176 AKIQAKI 1182
>UNIPROTKB|F8WAM4 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01025160
ProteinModelPortal:F8WAM4 SMR:F8WAM4 PRIDE:F8WAM4
Ensembl:ENST00000354474 ArrayExpress:F8WAM4 Bgee:F8WAM4
Uniprot:F8WAM4
Length = 960
Score = 137 (53.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 55/203 (27%), Positives = 86/203 (42%)
Query: 3 DSHSYDRI--SVHQA-LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXX 57
D+ DR ++ A L SV D+L WR K+ G V+ G+S L
Sbjct: 752 DTEKEDRSPSAIFSAELSKTSVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTA 809
Query: 58 XXXXXXXXXAILF--FWG------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNH 109
I F + G KS IS++ V K ++ VN
Sbjct: 810 YIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNC 869
Query: 110 ALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDH 169
+ R + + +L L+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q
Sbjct: 870 TIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQ 929
Query: 170 IDEKLCKIQRVIQMQYRKIDESL 192
ID L + ++ KI +
Sbjct: 930 IDHYLGLANKNVKDAMAKIQAKI 952
>UNIPROTKB|D4AEM9 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:620989
GO:GO:0005783 PANTHER:PTHR10994 IPI:IPI00568363
Ensembl:ENSRNOT00000051817 ArrayExpress:D4AEM9 Uniprot:D4AEM9
Length = 1045
Score = 137 (53.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG-- 73
SV D+L WR K+ G V+ G+S L I F + G
Sbjct: 857 SVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 914
Query: 74 ----KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
KS IS++ V K ++ VN + R + + +L L+
Sbjct: 915 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKF 974
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
A L+WV +YVG++FN LTL+ + ++ S+PV+YE+ Q ID L + ++ KI
Sbjct: 975 AVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQ 1034
Query: 190 ESL 192
+
Sbjct: 1035 AKI 1037
>RGD|620989 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007413 "axonal fasciculation" evidence=ISO;IDA]
[GO:0007568 "aging" evidence=IEP] [GO:0010977 "negative regulation
of neuron projection development" evidence=IDA] [GO:0014823
"response to activity" evidence=IEP] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0021553 "olfactory nerve development"
evidence=IEP] [GO:0021801 "cerebral cortex radial glia guided
migration" evidence=ISO;ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO;IDA] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0030334 "regulation of
cell migration" evidence=ISO] [GO:0030517 "negative regulation of
axon extension" evidence=ISO;ISS;IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0033603 "positive regulation of dopamine
secretion" evidence=IMP] [GO:0042995 "cell projection"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043209
"myelin sheath" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IDA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IDA] [GO:0048679 "regulation
of axon regeneration" evidence=IDA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] [GO:0050771 "negative regulation of
axonogenesis" evidence=IDA;IMP] [GO:0051930 "regulation of sensory
perception of pain" evidence=IDA] [GO:0051960 "regulation of
nervous system development" evidence=ISO] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISO] [GO:0070571
"negative regulation of neuron projection regeneration"
evidence=IMP] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISO;IDA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 RGD:620989 GO:GO:0005886 GO:GO:0005635
GO:GO:0043234 GO:GO:0032403 GO:GO:0014823 GO:GO:0007568
GO:GO:0051930 GO:GO:0043025 GO:GO:0033603 GO:GO:0045665
GO:GO:0043005 GO:GO:0001525 GO:GO:0030334 GO:GO:0030176
GO:GO:0060317 GO:GO:0007413 GO:GO:0048709 GO:GO:0043209
GO:GO:0030517 GO:GO:0021553 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
GO:GO:0070571 GO:GO:0048679 GO:GO:2000172 OrthoDB:EOG4XH010
EMBL:AF051335 EMBL:AJ242961 EMBL:AJ242962 EMBL:AJ242963
EMBL:AF132045 EMBL:AF132046 IPI:IPI00230986 IPI:IPI00230987
IPI:IPI00231765 IPI:IPI00778998 RefSeq:NP_114019.1 UniGene:Rn.1348
UniGene:Rn.163269 ProteinModelPortal:Q9JK11 SMR:Q9JK11
IntAct:Q9JK11 STRING:Q9JK11 PhosphoSite:Q9JK11 PRIDE:Q9JK11
Ensembl:ENSRNOT00000006957 Ensembl:ENSRNOT00000042965
Ensembl:ENSRNOT00000056823 GeneID:83765 KEGG:rno:83765
UCSC:RGD:620989 HOGENOM:HOG000148576 InParanoid:Q9JK11
NextBio:616333 ArrayExpress:Q9JK11 Genevestigator:Q9JK11
GermOnline:ENSRNOG00000004621 Uniprot:Q9JK11
Length = 1163
Score = 137 (53.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG-- 73
SV D+L WR K+ G V+ G+S L I F + G
Sbjct: 975 SVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 1032
Query: 74 ----KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
KS IS++ V K ++ VN + R + + +L L+
Sbjct: 1033 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKF 1092
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
A L+WV +YVG++FN LTL+ + ++ S+PV+YE+ Q ID L + ++ KI
Sbjct: 1093 AVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQ 1152
Query: 190 ESL 192
+
Sbjct: 1153 AKI 1155
>UNIPROTKB|F1LQN3 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IEA]
[GO:2000172 "regulation of branching morphogenesis of a nerve"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620989 GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 IPI:IPI00231765
PRIDE:F1LQN3 Ensembl:ENSRNOT00000006443 ArrayExpress:F1LQN3
Uniprot:F1LQN3
Length = 1163
Score = 137 (53.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 49/183 (26%), Positives = 78/183 (42%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG-- 73
SV D+L WR K+ G V+ G+S L I F + G
Sbjct: 975 SVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 1032
Query: 74 ----KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
KS IS++ V K ++ VN + R + + +L L+
Sbjct: 1033 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKF 1092
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
A L+WV +YVG++FN LTL+ + ++ S+PV+YE+ Q ID L + ++ KI
Sbjct: 1093 AVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQ 1152
Query: 190 ESL 192
+
Sbjct: 1153 AKI 1155
>UNIPROTKB|Q9NQC3 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IDA] [GO:0030517 "negative regulation of axon extension"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=NAS] [GO:0006915
"apoptotic process" evidence=NAS] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=ISS] [GO:0007413 "axonal
fasciculation" evidence=ISS] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISS] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0030334
"regulation of cell migration" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005886 GO:GO:0005635 Reactome:REACT_111102
GO:GO:0006915 GO:GO:0048011 Pathway_Interaction_DB:p75ntrpathway
EMBL:CH471053 GO:GO:0043234 GO:GO:0042981 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0060317 GO:GO:0007413 GO:GO:0048709
GO:GO:0043209 GO:GO:0030517 GO:GO:0021553 EMBL:AC013414
GO:GO:0045687 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG306139 EMBL:AF087901 EMBL:AF148537 EMBL:AF148538
EMBL:AJ251383 EMBL:AJ251384 EMBL:AJ251385 EMBL:AB040462
EMBL:AB040463 EMBL:AF333336 EMBL:AY102285 EMBL:AY102276
EMBL:AY102277 EMBL:AY102278 EMBL:AY102279 EMBL:AY123245
EMBL:AY123246 EMBL:AY123247 EMBL:AY123248 EMBL:AY123249
EMBL:AY123250 EMBL:AB015639 EMBL:AF077050 EMBL:AF132047
EMBL:AF132048 EMBL:AF320999 EMBL:AB020693 EMBL:AF125103
EMBL:AF177332 EMBL:AC092461 EMBL:AC093165 EMBL:BC001035
EMBL:BC007109 EMBL:BC010737 EMBL:BC012619 EMBL:BC014366
EMBL:BC016165 EMBL:BC026788 EMBL:BC068991 EMBL:BC150182
EMBL:BC152425 EMBL:BC152555 EMBL:AF063601 IPI:IPI00021766
IPI:IPI00219207 IPI:IPI00298289 IPI:IPI00477663 IPI:IPI00478442
IPI:IPI00894213 RefSeq:NP_008939.1 RefSeq:NP_065393.1
RefSeq:NP_722550.1 RefSeq:NP_997403.1 RefSeq:NP_997404.1
UniGene:Hs.741208 PDB:2G31 PDB:2JV5 PDBsum:2G31 PDBsum:2JV5
ProteinModelPortal:Q9NQC3 SMR:Q9NQC3 IntAct:Q9NQC3 MINT:MINT-154434
STRING:Q9NQC3 PhosphoSite:Q9NQC3 DMDM:17369290 PaxDb:Q9NQC3
PRIDE:Q9NQC3 DNASU:57142 Ensembl:ENST00000317610
Ensembl:ENST00000337526 Ensembl:ENST00000357376
Ensembl:ENST00000357732 Ensembl:ENST00000394609
Ensembl:ENST00000394611 Ensembl:ENST00000404909
Ensembl:ENST00000405240 GeneID:57142 KEGG:hsa:57142 UCSC:uc002ryd.3
UCSC:uc002ryf.3 CTD:57142 GeneCards:GC02M055199 H-InvDB:HIX0002059
HGNC:HGNC:14085 HPA:CAB005388 MIM:604475 neXtProt:NX_Q9NQC3
PharmGKB:PA34883 HOVERGEN:HBG023134 InParanoid:Q9NQC3 ChiTaRS:RTN4
EvolutionaryTrace:Q9NQC3 GenomeRNAi:57142 NextBio:63075
PMAP-CutDB:Q9NQC3 ArrayExpress:Q9NQC3 Bgee:Q9NQC3
Genevestigator:Q9NQC3 GermOnline:ENSG00000115310 GO:GO:0070571
GO:GO:0048679 GO:GO:2000172 Uniprot:Q9NQC3
Length = 1192
Score = 137 (53.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 55/203 (27%), Positives = 86/203 (42%)
Query: 3 DSHSYDRI--SVHQA-LGGGSVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXX 57
D+ DR ++ A L SV D+L WR K+ G V+ G+S L
Sbjct: 984 DTEKEDRSPSAIFSAELSKTSVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTA 1041
Query: 58 XXXXXXXXXAILF--FWG------KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNH 109
I F + G KS IS++ V K ++ VN
Sbjct: 1042 YIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNC 1101
Query: 110 ALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDH 169
+ R + + +L L+ A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q
Sbjct: 1102 TIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQ 1161
Query: 170 IDEKLCKIQRVIQMQYRKIDESL 192
ID L + ++ KI +
Sbjct: 1162 IDHYLGLANKNVKDAMAKIQAKI 1184
>UNIPROTKB|E2R925 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03007528
EMBL:AAEX03007529 Ensembl:ENSCAFT00000004428 Uniprot:E2R925
Length = 1186
Score = 136 (52.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 50/183 (27%), Positives = 78/183 (42%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG-- 73
SV D+L WR K+ G V+ G+S L I F + G
Sbjct: 998 SVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVI 1055
Query: 74 ----KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
KS IS++ V K ++ VN + R + + +L L+
Sbjct: 1056 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 1115
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + ++ KI
Sbjct: 1116 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQ 1175
Query: 190 ESL 192
+
Sbjct: 1176 AKI 1178
>UNIPROTKB|J9P0R7 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:HTSENKT
EMBL:AAEX03007528 EMBL:AAEX03007529 Ensembl:ENSCAFT00000045541
Uniprot:J9P0R7
Length = 1198
Score = 136 (52.9 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 50/183 (27%), Positives = 78/183 (42%)
Query: 20 SVADVLLWR--KRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILF--FWG-- 73
SV D+L WR K+ G V+ G+S L I F + G
Sbjct: 1010 SVVDLLYWRDIKKTG--VVFGASLFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVI 1067
Query: 74 ----KSASXXXXXXXXXXXXEISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQV 129
KS IS++ V K ++ VN + R + + +L L+
Sbjct: 1068 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 1127
Query: 130 AFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID 189
A L+WV +YVG++FN LTL+ + ++ SVPV+YE+ Q ID L + ++ KI
Sbjct: 1128 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQ 1187
Query: 190 ESL 192
+
Sbjct: 1188 AKI 1190
>UNIPROTKB|K7EMR7 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:CH471126
EMBL:AC138534 PANTHER:PTHR10994 HGNC:HGNC:10468
Ensembl:ENST00000590526 Uniprot:K7EMR7
Length = 271
Score = 110 (43.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 28/107 (26%), Positives = 58/107 (54%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
++ + + + +I V A + R + +L L++A L +++++VG++FN LTL+
Sbjct: 149 LTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLLI 208
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+GV+ ++P+LY + Q ID+ + ++ Q I + KIP
Sbjct: 209 LGVIGLFTIPLLYRQHQAQIDQYV----GLVTNQLSHIKAKIRAKIP 251
Score = 50 (22.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 18 GGSVADVLLWRK-RCGGVVLLG 38
G VAD+L W+ R GVV G
Sbjct: 68 GSKVADLLYWKDTRTSGVVFTG 89
>ZFIN|ZDB-GENE-060331-95 [details] [associations]
symbol:rtn2b "reticulon 2b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-060331-95 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
EMBL:BX248087 EMBL:BC114230 EMBL:AY555064 IPI:IPI00485938
RefSeq:NP_001025130.1 UniGene:Dr.88737 Ensembl:ENSDART00000079431
GeneID:562639 KEGG:dre:562639 CTD:562639 InParanoid:Q4G5T7
OMA:QQVRIRR NextBio:20884503 Uniprot:Q4G5T7
Length = 208
Score = 121 (47.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/111 (27%), Positives = 63/111 (56%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
++D+ V+ A+++ + + A+S + + ++ ++ L++++YVG N LTLV
Sbjct: 83 LTDEDTVRMAEQMVLLIATAVSELKRLFFIDSIMDSVKFIVFLYLLTYVGVQANGLTLVM 142
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKID--ESLLKKIPLP 199
GV+ + S+P+LY+ Q+ ID+ + +Q +++ +D SL K P P
Sbjct: 143 SGVICAFSLPLLYKLQQERIDKIIKAVQLLVEKITEMVDLVVSLAKPPPAP 193
>ZFIN|ZDB-GENE-060420-1 [details] [associations]
symbol:rtn2a "reticulon 2a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-060420-1 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 EMBL:CR925772 EMBL:BC115054 EMBL:AY576807
IPI:IPI00775060 RefSeq:NP_001025136.1 UniGene:Dr.45249
Ensembl:ENSDART00000124998 GeneID:569502 KEGG:dre:569502 CTD:569502
eggNOG:NOG260892 InParanoid:Q4G5K8 OMA:LFQLSII OrthoDB:EOG4NCMDZ
NextBio:20889711 Uniprot:Q4G5K8
Length = 203
Score = 120 (47.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 110 ALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDH 169
AL R++ NL L+ L++VV+++G++ N LTL+ IGV+ SVP+ Y + QD
Sbjct: 102 ALETLRNLIFVGNLFSSLKFWLLMYVVTFLGNLCNGLTLIIIGVIAVFSVPLFYTRHQDK 161
Query: 170 IDEKLCKIQRVI 181
+D + +Q I
Sbjct: 162 VDSCIVAVQAQI 173
>ZFIN|ZDB-GENE-030710-5 [details] [associations]
symbol:rtn3 "reticulon 3" species:7955 "Danio rerio"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-5 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 eggNOG:NOG303514 OrthoDB:EOG4229M0
EMBL:CT030012 EMBL:CU457795 EMBL:AY555038 IPI:IPI00774300
RefSeq:XP_003198973.1 UniGene:Dr.130204 SMR:Q4G5W3
Ensembl:ENSDART00000041088 Ensembl:ENSDART00000124244
GeneID:100538268 KEGG:dre:100538268 InParanoid:Q4G5W3
Uniprot:Q4G5W3
Length = 236
Score = 121 (47.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 107 VNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKF 166
VN AL + + +L L++A ++W+++YVG+VFN +T++ + +L SVP +YEK
Sbjct: 141 VNRALKQMSRLFLVEDLVDSLKLAVVMWLLTYVGAVFNGITILILADILLFSVPPIYEKN 200
Query: 167 QDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ ID + I R Q+ L +K+P
Sbjct: 201 KTQIDHYI-DIART---QFNTTVAKLQEKLP 227
>UNIPROTKB|O75298 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=NAS] [GO:0004871 "signal
transducer activity" evidence=NAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0008219
GO:GO:0004871 GO:GO:0030176 PANTHER:PTHR10994 EMBL:AF004222
EMBL:AF004223 EMBL:AF004224 EMBL:AF038540 EMBL:BK001686
EMBL:BK001687 EMBL:BK001688 IPI:IPI00024983 IPI:IPI00216112
IPI:IPI00410134 RefSeq:NP_005610.1 RefSeq:NP_996783.1
RefSeq:NP_996784.1 UniGene:Hs.47517 ProteinModelPortal:O75298
SMR:O75298 IntAct:O75298 STRING:O75298 PhosphoSite:O75298
PaxDb:O75298 PRIDE:O75298 Ensembl:ENST00000245923
Ensembl:ENST00000344680 Ensembl:ENST00000430715 GeneID:6253
KEGG:hsa:6253 UCSC:uc002pcb.3 UCSC:uc002pcc.3 CTD:6253
GeneCards:GC19M045988 HGNC:HGNC:10468 HPA:HPA034941 MIM:603183
MIM:604805 neXtProt:NX_O75298 Orphanet:100993 PharmGKB:PA34881
eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
InParanoid:O75298 OMA:REPITGQ OrthoDB:EOG4FJ88W PhylomeDB:O75298
ChiTaRS:RTN2 GenomeRNAi:6253 NextBio:24285 Bgee:O75298
CleanEx:HS_RTN2 Genevestigator:O75298 GermOnline:ENSG00000125744
Uniprot:O75298
Length = 545
Score = 110 (43.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/107 (26%), Positives = 58/107 (54%)
Query: 91 ISDQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVY 150
++ + + + +I V A + R + +L L++A L +++++VG++FN LTL+
Sbjct: 423 LTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLLI 482
Query: 151 IGVLLSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+GV+ ++P+LY + Q ID+ + ++ Q I + KIP
Sbjct: 483 LGVIGLFTIPLLYRQHQAQIDQYV----GLVTNQLSHIKAKIRAKIP 525
Score = 50 (22.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 18 GGSVADVLLWRK-RCGGVVLLG 38
G VAD+L W+ R GVV G
Sbjct: 342 GSKVADLLYWKDTRTSGVVFTG 363
>RGD|1303245 [details] [associations]
symbol:Rtn2 "reticulon 2" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 CTD:6253 eggNOG:NOG250449
HOGENOM:HOG000119393 HOVERGEN:HBG099866 OMA:REPITGQ
OrthoDB:EOG4FJ88W IPI:IPI00409538 EMBL:BC129079 EMBL:AY279211
EMBL:BK001788 RefSeq:NP_963856.1 UniGene:Rn.3210 STRING:Q6WN19
GeneID:308410 KEGG:rno:308410 UCSC:RGD:1303245 InParanoid:Q6WN19
NextBio:658806 Genevestigator:Q6WN19 Uniprot:Q6WN19
Length = 469
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 108 NHALSIA---RDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYE 164
+H +S A R + +L L++A L +++++VG++FN LTLV +GV+ +VP+LY
Sbjct: 362 SHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLLYR 421
Query: 165 KFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ Q ID+ + ++ Q I + KIP
Sbjct: 422 QHQAQIDQYV----GLVTSQLSHIKAKIRAKIP 450
>UNIPROTKB|F1LM00 [details] [associations]
symbol:Rtn2 "Protein Rtn2" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
IPI:IPI00409538 Ensembl:ENSRNOT00000022528 ArrayExpress:F1LM00
Uniprot:F1LM00
Length = 470
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 108 NHALSIA---RDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYE 164
+H +S A R + +L L++A L +++++VG++FN LTLV +GV+ +VP+LY
Sbjct: 363 SHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLLYR 422
Query: 165 KFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ Q ID+ + ++ Q I + KIP
Sbjct: 423 QHQAQIDQYV----GLVTSQLSHIKAKIRAKIP 451
>ZFIN|ZDB-GENE-030710-2 [details] [associations]
symbol:rtn4b "reticulon 4b" species:7955 "Danio
rerio" [GO:0005199 "structural constituent of cell wall"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 InterPro:IPR003882 Pfam:PF02453 PRINTS:PR01218
PROSITE:PS50845 ZFIN:ZDB-GENE-030710-2 GO:GO:0005783 GO:GO:0005199
PANTHER:PTHR10994 EMBL:AY555051 IPI:IPI00650525
RefSeq:NP_001035425.1 UniGene:Dr.79909 ProteinModelPortal:Q4G5V0
PRIDE:Q4G5V0 GeneID:678586 KEGG:dre:678586 CTD:678586
HOVERGEN:HBG096757 InParanoid:Q4G5V0 NextBio:20902411 Bgee:Q4G5V0
Uniprot:Q4G5V0
Length = 875
Score = 120 (47.3 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 107 VNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKF 166
+N AL R + + +L L++A LW+++YVGS FN LTL+ I ++ + S P+ YE+
Sbjct: 782 INTALVELRRLFLVEDLVDSLKLAVGLWLLTYVGSWFNGLTLLIIALIGAFSGPIAYERH 841
Query: 167 QDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
Q ID+ + +I Q R+ +L +P
Sbjct: 842 QSEIDQFIS----MINTQMREALGKVLAMVP 868
Score = 37 (18.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 20 SVADVLLWRKRCGGVVLLGSSTILWFLF 47
+V +L WR ++LGS +L LF
Sbjct: 687 AVLQLLYWRDVRASALVLGSLLLL-LLF 713
>MGI|MGI:107612 [details] [associations]
symbol:Rtn2 "reticulon 2 (Z-band associated protein)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 MGI:MGI:107612 GO:GO:0016021 GO:GO:0005789
EMBL:AF093624 PANTHER:PTHR10994 HOGENOM:HOG000015254 CTD:6253
eggNOG:NOG250449 HOVERGEN:HBG099866 OMA:REPITGQ OrthoDB:EOG4FJ88W
EMBL:AF038537 EMBL:AF038538 EMBL:AF038539 EMBL:BC031370
IPI:IPI00120427 IPI:IPI00229453 RefSeq:NP_001020535.1
RefSeq:NP_038676.1 UniGene:Mm.24142 ProteinModelPortal:O70622
SMR:O70622 STRING:O70622 PhosphoSite:O70622 PaxDb:O70622
PRIDE:O70622 Ensembl:ENSMUST00000032559 Ensembl:ENSMUST00000108468
GeneID:20167 KEGG:mmu:20167 InParanoid:O70622 NextBio:297679
Bgee:O70622 CleanEx:MM_RTN2 Genevestigator:O70622
GermOnline:ENSMUSG00000030401 Uniprot:O70622
Length = 471
Score = 118 (46.6 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 108 NHALSIA---RDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYE 164
+H +S A R + +L L++A L +++++VG++FN LTLV +GV+ +VP+LY
Sbjct: 364 SHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLLYR 423
Query: 165 KFQDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
+ Q ID+ + ++ Q I + KIP
Sbjct: 424 QHQAQIDQYV----GLVTNQLSHIKAKIRAKIP 452
>UNIPROTKB|F6S165 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:REPITGQ
EMBL:DAAA02047375 IPI:IPI00842729 Ensembl:ENSBTAT00000043635
Uniprot:F6S165
Length = 541
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 107 VNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKF 166
V+ A+ + R + +L L++A L +++++VG+VFN LTL+ +GV+ +VP+LY +
Sbjct: 436 VSAAIQL-RHFFLVEDLVDSLKLALLFYILTFVGAVFNGLTLLILGVIGVFTVPLLYRQH 494
Query: 167 QDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
Q ID+ + ++ Q I + KIP
Sbjct: 495 QAQIDQYV----GLVTNQLSHIKAKIRAKIP 521
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 10 ISVHQALGGGSVADVLLWRK-RCGGVV 35
+S+ A G V D+L W+ + GVV
Sbjct: 330 LSLGGAEMGSKVVDLLHWKDAKTSGVV 356
>UNIPROTKB|Q0P586 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 CTD:6253
eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
EMBL:DAAA02047375 EMBL:BC120363 IPI:IPI00696516
RefSeq:NP_001106731.1 UniGene:Bt.20228 Ensembl:ENSBTAT00000010770
GeneID:359720 KEGG:bta:359720 InParanoid:Q0P586 NextBio:20812749
Uniprot:Q0P586
Length = 470
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 29/91 (31%), Positives = 53/91 (58%)
Query: 107 VNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKF 166
V+ A+ + R + +L L++A L +++++VG+VFN LTL+ +GV+ +VP+LY +
Sbjct: 365 VSAAIQL-RHFFLVEDLVDSLKLALLFYILTFVGAVFNGLTLLILGVIGVFTVPLLYRQH 423
Query: 167 QDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
Q ID+ + ++ Q I + KIP
Sbjct: 424 QAQIDQYV----GLVTNQLSHIKAKIRAKIP 450
>WB|WBGene00004336 [details] [associations]
symbol:ret-1 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GeneTree:ENSGT00550000074593 PANTHER:PTHR10994 EMBL:Z78066
GeneID:179981 KEGG:cel:CELE_W06A7.3 CTD:179981 NextBio:907638
EMBL:Z78067 RefSeq:NP_001123026.1 ProteinModelPortal:G5EDI2
SMR:G5EDI2 IntAct:G5EDI2 EnsemblMetazoa:W06A7.3f WormBase:W06A7.3f
OMA:EITQNDD Uniprot:G5EDI2
Length = 3303
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 98 KAADEIQVWVNHALSIA---RDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVL 154
K + V+V HA IA + + + ++ +LW ++Y+ S F+ TL +G+L
Sbjct: 3190 KVHAQADVFVEHATCIANKLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLL 3249
Query: 155 LSLSVPVLYEKFQDHIDEKLCKIQRVIQMQYRKIDESL--LKKIPLPQNKQKKTQ 207
SVP +YE Q+ ID L I ++ IDE L L+ P+ ++KK Q
Sbjct: 3250 GVFSVPKVYESNQEAIDPHLATISGHLKNVQNIIDEKLPFLRSAPVAA-EEKKDQ 3303
>UNIPROTKB|E2RDR4 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:REPITGQ
EMBL:AAEX03000875 EMBL:AAEX03000876 Ensembl:ENSCAFT00000007156
Uniprot:E2RDR4
Length = 484
Score = 109 (43.4 bits), Expect = 0.00069, P = 0.00069
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 107 VNHALSIARDIAMGRNLSRFLQVAFLLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKF 166
V+ A+ + R + +L L++A L +++++VG+VFN LTL+ +GV+ +VP+LY +
Sbjct: 379 VSMAIQL-RHFFLVEDLVDSLKLALLFYILTFVGAVFNGLTLLILGVIGLFTVPLLYRQH 437
Query: 167 QDHIDEKLCKIQRVIQMQYRKIDESLLKKIP 197
Q +D+ + ++ Q I + KIP
Sbjct: 438 QAQMDQYV----GLVTNQLSHIKAKIRAKIP 464
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 109 (43.4 bits), Expect = 0.00086, P = 0.00085
Identities = 37/160 (23%), Positives = 64/160 (40%)
Query: 16 LGGGSVADVLLWRKRCGGVVLLGSSTILWFLFERAGYXXXXXXXXXXXXXXAILFFWG-- 73
LGGG VAD LLW+ ++ + +++ F G LF G
Sbjct: 379 LGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTALSKALLVASVFLFLHGIL 438
Query: 74 -KSASXXXXXXXXXXXXEIS-DQSVVKAADEIQVWVNHALSIARDIAMGRNLSRFLQVAF 131
+ +S D S + I W N + R + G + S F +V F
Sbjct: 439 PEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSW-NTTVKALRSLCQGNDWSFFFKVVF 497
Query: 132 LLWVVSYVGSVFNFLTLVYIGVLLSLSVPVLYEKFQDHID 171
+L +S G++ + ++ IG+ ++ ++YEK + ID
Sbjct: 498 VLLALSLAGAI-SLHSIFVIGLPIAFLAFLVYEKKEQEID 536
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 207 181 0.00095 109 3 11 22 0.36 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 74
No. of states in DFA: 585 (62 KB)
Total size of DFA: 157 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.15u 0.15s 14.30t Elapsed: 00:00:01
Total cpu time: 14.15u 0.15s 14.30t Elapsed: 00:00:01
Start: Sat May 11 00:42:39 2013 End: Sat May 11 00:42:40 2013