BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028541
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans
GN=Y54G2A.17 PE=2 SV=3
Length = 562
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 144/185 (77%)
Query: 22 NPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIAN 81
+ +V PLL D YQ TM YAYWK G H+E AVFD++FRKNPF GE+T+FAGLE+C+RF+ N
Sbjct: 25 DSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLRFVEN 84
Query: 82 FKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVA 141
FK ++ +I +V+ LP + E F++YL +N S + + A+ EGSVVFPKVPLL + GP+A
Sbjct: 85 FKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTINGPLA 144
Query: 142 VVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIG 201
+ QL+ET +NL+NYASLV TNAAR R +G LLEFGLRRAQGP+GG+ ASKYCYIG
Sbjct: 145 MCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKYCYIG 204
Query: 202 GFDAT 206
GFDAT
Sbjct: 205 GFDAT 209
>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum
GN=naprt PE=2 SV=1
Length = 589
Score = 251 bits (640), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 148/196 (75%), Gaps = 1/196 (0%)
Query: 11 NQAGRSVSGPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFA 70
+Q + P N VTPLL DLYQ TMAY+ WK +H+ AVFDLYFRK+PFGGE+T+FA
Sbjct: 46 DQESKDKIKPLNGFVTPLLTDLYQITMAYSLWKNNRHEIPAVFDLYFRKSPFGGEFTVFA 105
Query: 71 GLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPK 130
GLEE IRF+++F T+EE+ F+++ +P CE F DYL ++ S V ++A+ EGSVVFP+
Sbjct: 106 GLEEVIRFVSDFHYTKEEVGFIKEMIP-DCEQEFLDYLSKLDSSSVTLYAMKEGSVVFPR 164
Query: 131 VPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDG 190
VPLLRVEGP+ + QL ET + L+N+ASLV TNAARHR GK K++LEFGLRRAQGPDG
Sbjct: 165 VPLLRVEGPMILCQLFETTLLCLVNFASLVATNAARHRLAVGKEKVMLEFGLRRAQGPDG 224
Query: 191 GIGASKYCYIGGFDAT 206
+ AS+Y Y+GG D T
Sbjct: 225 AMSASRYSYLGGADGT 240
>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2
SV=2
Length = 546
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 140/182 (76%), Gaps = 2/182 (1%)
Query: 25 VTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKL 84
V PLL DLYQ MAYAYW+AG+H+E AVF+L+FR NPFGG +++FAGL +C+ F+ NF
Sbjct: 14 VPPLLTDLYQ--MAYAYWRAGRHNEPAVFELFFRDNPFGGGFSLFAGLSDCLLFLQNFSF 71
Query: 85 TEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQ 144
+++++ ++R LP + GFF YL+ ++CS V V A+ EGSVVF +VPLL V GP+AVVQ
Sbjct: 72 SDDDVQYLRSVLPADTDAGFFSYLKELDCSCVSVSAVPEGSVVFARVPLLEVSGPLAVVQ 131
Query: 145 LLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204
LLET + L+NYASLV +NAAR R AG + L+E GLRRAQGPDGG+ AS+Y YIGGFD
Sbjct: 132 LLETSLLCLVNYASLVCSNAARFRLAAGPRRRLMEMGLRRAQGPDGGLTASRYTYIGGFD 191
Query: 205 AT 206
T
Sbjct: 192 LT 193
>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster
GN=CG3714 PE=2 SV=2
Length = 555
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 144/185 (77%)
Query: 22 NPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIAN 81
N +V PLL DLYQ TMAYAYWK+ K D+ AVFDL+FR NPF GE+TIFAGLEEC++F+ +
Sbjct: 22 NGVVQPLLTDLYQITMAYAYWKSDKTDDTAVFDLFFRNNPFHGEFTIFAGLEECLKFLDS 81
Query: 82 FKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVA 141
F ++ +I +++ +LP E FF+YL + DV ++AI EG+V FP+VP++++EGP+
Sbjct: 82 FHYSQSDIEYLKQTLPEGIEHEFFEYLGNLTARDVTLYAIDEGTVAFPRVPIIKIEGPLI 141
Query: 142 VVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIG 201
+VQLLET + L+NYASL+ TNAAR+R VAGK LLEFGLRRAQGPDGG+ ASKY Y G
Sbjct: 142 IVQLLETTLLTLVNYASLMATNAARYRMVAGKHVKLLEFGLRRAQGPDGGLSASKYSYTG 201
Query: 202 GFDAT 206
GFD T
Sbjct: 202 GFDGT 206
>sp|A5PK51|PNCB_BOVIN Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2
SV=2
Length = 538
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 135/180 (75%)
Query: 27 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTE 86
PLL DLYQ TMA YW+AG+ ++A F+L+FR+ PFGG + + AGL +C+RF+ F+L +
Sbjct: 15 PLLTDLYQATMALGYWRAGRAQDQAEFELFFRQCPFGGAFALAAGLRDCVRFLRAFRLRD 74
Query: 87 EEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLL 146
++ F+ +LP + FF++LR ++CS V V A+ EGS+ FP VPLL+V GP+ VVQLL
Sbjct: 75 ADVQFLASALPPDTDPAFFEHLRALDCSGVTVRALPEGSLAFPGVPLLQVSGPLLVVQLL 134
Query: 147 ETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDAT 206
ETP + L++YASL+ TNAAR R +AG K LLE GLRRAQGPDGG+ AS Y Y+GGFDA+
Sbjct: 135 ETPLLCLVSYASLIATNAARLRLIAGPDKRLLEMGLRRAQGPDGGLTASTYSYLGGFDAS 194
>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1
SV=2
Length = 538
Score = 224 bits (570), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 134/180 (74%)
Query: 27 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTE 86
PLL DLYQ TMA YW+AG+ + A F+L+FR+ PFGG + + AGL +C+RF+ F+L +
Sbjct: 15 PLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLRDCVRFLRAFRLRD 74
Query: 87 EEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLL 146
++ F+ LP + FF++LR ++CS+V V A+ EGS+ FP VPLL+V GP+ VVQLL
Sbjct: 75 ADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPLLQVSGPLLVVQLL 134
Query: 147 ETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDAT 206
ETP + L++YASLV TNAAR R +AG K LLE GLRRAQGPDGG+ AS Y Y+GGFD++
Sbjct: 135 ETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSS 194
>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2
SV=1
Length = 538
Score = 220 bits (561), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 134/183 (73%)
Query: 24 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFK 83
+V PLL DLYQ TMA YW+AG+ E A F+L+FR PFGG + + AGL++C+RF+ F+
Sbjct: 12 VVRPLLTDLYQATMALGYWRAGRACEAAEFELFFRHCPFGGSFALSAGLQDCMRFLRAFR 71
Query: 84 LTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVV 143
L + ++ F+ LP + FF++LR ++CS V V A+ EGS+ FP VPLL+V GP+ +V
Sbjct: 72 LRDADVQFLASVLPPDTDPAFFEHLRALDCSGVTVRALPEGSLAFPGVPLLQVSGPLLLV 131
Query: 144 QLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGF 203
QLLETP + L++YASLV TNAAR R +AG K LLE GLRRAQGPDGG AS Y Y+GGF
Sbjct: 132 QLLETPLLCLVSYASLVATNAARLRLIAGPDKKLLEMGLRRAQGPDGGFTASIYSYLGGF 191
Query: 204 DAT 206
D++
Sbjct: 192 DSS 194
>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1
PE=2 SV=1
Length = 538
Score = 220 bits (561), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 133/183 (72%)
Query: 24 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFK 83
+V PLL DLYQ TM YW+AG+ E A F+L+FR PFGG + + AGL++CIRF+ F+
Sbjct: 12 VVRPLLTDLYQATMGLGYWRAGRACEEAEFELFFRHCPFGGSFALTAGLQDCIRFLRAFR 71
Query: 84 LTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVV 143
L + ++ F+ LP + FF++LR ++CS V V A+ EGS+ FP VPLL+V GP+ +V
Sbjct: 72 LRDADVQFLASVLPPDTDPAFFEHLRALDCSRVSVRALPEGSLAFPGVPLLQVSGPLLLV 131
Query: 144 QLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGF 203
QLLETP + L++YASLV TNAAR R +AG K LLE GLRRAQGPDGG AS Y Y+GGF
Sbjct: 132 QLLETPLLCLVSYASLVATNAARLRLIAGPDKRLLEMGLRRAQGPDGGFTASIYSYLGGF 191
Query: 204 DAT 206
D++
Sbjct: 192 DSS 194
>sp|O32090|PNCB_BACSU Nicotinate phosphoribosyltransferase OS=Bacillus subtilis (strain
168) GN=pncB PE=3 SV=1
Length = 490
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 119/179 (66%), Gaps = 4/179 (2%)
Query: 28 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEE 87
L DLYQ MA YW+ G H+++A+F+L+FR+ PF Y +FAGLE+ I ++ NFK T+
Sbjct: 13 LHTDLYQINMAETYWRDGIHEKKAIFELFFRRLPFENGYAVFAGLEKAIEYLENFKFTDS 72
Query: 88 EITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLE 147
++++++D L G ED F +YLRG++ + ++++ EG +VF P++RVE P+ QL+E
Sbjct: 73 DLSYLQDEL-GYHED-FIEYLRGLSFTG-SLYSMKEGELVFNNEPIMRVEAPLVEAQLIE 129
Query: 148 TPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDAT 206
T +N++NY +L+ T AAR + V G ++ LEFG RRA D + ++ IGGF AT
Sbjct: 130 TALLNIVNYQTLIATKAARIKGVIG-DEVALEFGTRRAHEMDAAMWGARAALIGGFSAT 187
>sp|O53770|PNCB2_MYCTU Nicotinate phosphoribosyltransferase pncB2 OS=Mycobacterium
tuberculosis GN=pncB2 PE=2 SV=1
Length = 463
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 25 VTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKL 84
V L DLY+ TMA AYW A + AVF+++FRK P G Y + AGL + + F+ F+
Sbjct: 7 VGALFTDLYEVTMAQAYW-AERMSGTAVFEIFFRKLPPGRSYIMAAGLADVVEFLEAFRF 65
Query: 85 TEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQ 144
E+++ ++R G D F +L G+ + +V A EG+V+FP P +++ P+ Q
Sbjct: 66 DEQDLRYLRGL--GQFSDEFLRWLAGVRFTG-DVWAAPEGTVIFPNEPAVQLIAPIIEAQ 122
Query: 145 LLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204
L+ET +N I+ S++ + AAR A + + +++FG RRA G D ++ Y+ G
Sbjct: 123 LVETFVLNQIHLQSVLASKAARVVAAA-RGRPVVDFGARRAHGTDAACKVARTSYLAGAA 181
Query: 205 AT 206
T
Sbjct: 182 GT 183
>sp|Q10641|PNCB1_MYCTU Nicotinate phosphoribosyltransferase pncB1 OS=Mycobacterium
tuberculosis GN=pncB1 PE=3 SV=2
Length = 448
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 20 PTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFI 79
P N LL D Y+ TM A + G + F+++ R+ P G Y + AG + +
Sbjct: 14 PDNQDPAGLLTDKYELTMLAAALRDGSANRPTTFEVFARRLPTGRRYGVVAGTGRLLEAL 73
Query: 80 ANFKLTEEEITFVRDSLPGSCEDGFFDYLRGIN-CSDVEVHAITEGSVVFPKVPLLRVEG 138
F+ + + L + YLR D++ +A EG + FP P+L V G
Sbjct: 74 PQFRFDADACELLAQFL----DPATVRYLREFRFRGDIDGYA--EGELYFPGSPVLSVRG 127
Query: 139 PVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQ 186
A LLET +++ N+ + + + AAR AG + L+E G RR
Sbjct: 128 SFAECVLLETLVLSIFNHDTAIASAAARMVSAAG-GRPLIEMGSRRTH 174
>sp|Q9HJ28|PNCB_THEAC Putative nicotinate phosphoribosyltransferase OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=Ta1145 PE=1 SV=1
Length = 392
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 103 GFFDYLRGINCSDVEVHAITEGSVVFPK------VPLLRVEGPVAVVQLLETPFVNLINY 156
G + L+ + DV+++AI EG+++FP+ VP +RVEG + ET + I
Sbjct: 56 GLDEVLKLLEGLDVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQ 115
Query: 157 ASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204
AS ++T A++ R AG S FG+RR P + YIGG D
Sbjct: 116 ASGISTKASKVRLAAGDSP-FFSFGIRRMH-PAISPMIDRSAYIGGAD 161
>sp|Q2JH03|G6PI_FRASC Glucose-6-phosphate isomerase OS=Frankia sp. (strain CcI3) GN=pgi
PE=3 SV=1
Length = 556
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 1 MEGKANGPSENQAGRSVSGPTNPMV--TPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFR 58
++ ++NG S + GR VS PT P+V TP N + + Y G A F + R
Sbjct: 360 LDMESNGKSVDLTGRPVSTPTGPIVWGTPGTNGQHAY---YQLLHQGTTIVPADFIGFVR 416
Query: 59 KNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCE 101
N G AG+++ +ANF E + F R + + E
Sbjct: 417 PNHPGVGTADGAGVDQHALLLANFLAQTEALAFGRTAAEVAAE 459
>sp|O58613|Y883_PYRHO UPF0051 protein PH0883 OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0883
PE=3 SV=1
Length = 326
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 103 GFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTT 162
GF DY +G VE H I +G+ VPLLRV+ A +L + IN A L+
Sbjct: 251 GFGDYAKG----HVECHEIVKGNADVQTVPLLRVKNDKA--ELTHEASIGRINEAQLMQL 304
Query: 163 NA 164
A
Sbjct: 305 MA 306
>sp|C3NE02|GATE_SULIY Glutamyl-tRNA(Gln) amidotransferase subunit E OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1) GN=gatE
PE=3 SV=1
Length = 633
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 IANFKLTEEEITFVRDSLPGSCEDGF 104
+ N+ +TEEEI VR++L + EDGF
Sbjct: 354 LPNYGITEEEINKVREALNATTEDGF 379
>sp|C3NHQ1|GATE_SULIN Glutamyl-tRNA(Gln) amidotransferase subunit E OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2) GN=gatE
PE=3 SV=1
Length = 633
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 IANFKLTEEEITFVRDSLPGSCEDGF 104
+ N+ +TEEEI VR++L + EDGF
Sbjct: 354 LPNYGITEEEINKVREALNATTEDGF 379
>sp|C3MYR6|GATE_SULIM Glutamyl-tRNA(Gln) amidotransferase subunit E OS=Sulfolobus
islandicus (strain M.14.25 / Kamchatka #1) GN=gatE PE=3
SV=1
Length = 633
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 IANFKLTEEEITFVRDSLPGSCEDGF 104
+ N+ +TEEEI VR++L + EDGF
Sbjct: 354 LPNYGITEEEINKVREALNATTEDGF 379
>sp|C3MPS2|GATE_SULIL Glutamyl-tRNA(Gln) amidotransferase subunit E OS=Sulfolobus
islandicus (strain L.S.2.15 / Lassen #1) GN=gatE PE=3
SV=1
Length = 633
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 IANFKLTEEEITFVRDSLPGSCEDGF 104
+ N+ +TEEEI VR++L + EDGF
Sbjct: 354 LPNYGITEEEINKVREALNATTEDGF 379
>sp|C4KH14|GATE_SULIK Glutamyl-tRNA(Gln) amidotransferase subunit E OS=Sulfolobus
islandicus (strain M.16.4 / Kamchatka #3) GN=gatE PE=3
SV=1
Length = 633
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 IANFKLTEEEITFVRDSLPGSCEDGF 104
+ N+ +TEEEI VR++L + EDGF
Sbjct: 354 LPNYGITEEEINKVREALNATTEDGF 379
>sp|C3N5E8|GATE_SULIA Glutamyl-tRNA(Gln) amidotransferase subunit E OS=Sulfolobus
islandicus (strain M.16.27) GN=gatE PE=3 SV=1
Length = 633
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 IANFKLTEEEITFVRDSLPGSCEDGF 104
+ N+ +TEEEI VR++L + EDGF
Sbjct: 354 LPNYGITEEEINKVREALNATTEDGF 379
>sp|Q97J90|PUR2_CLOAB Phosphoribosylamine--glycine ligase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=purD PE=3 SV=1
Length = 416
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 33/151 (21%)
Query: 9 SENQAGRSVSGPTNPMVTPLLNDLYQFTMA-YAYWKAGKHDERAVF---DLYFRKNPFGG 64
S+N +V GP P+V ++N+ + + + K G E + D + N
Sbjct: 59 SKNNIDLTVVGPEAPLVDGIVNEFKEKGLKIFGPGKVGAQLEGSKSFSKDFMKKYNVKTA 118
Query: 65 EYTIFAGLEECIRFIA-----------------------NFKLTEEEIT--FVRDSLPGS 99
EY +F EE + ++ ++KL EE I V+D GS
Sbjct: 119 EYAVFENSEESLEYLKKCTYPIVIKADGLAAGKGVVICEDYKLAEETIKAFMVKDVFKGS 178
Query: 100 CEDGFF-DYLRGINCSDVEVHAITEGSVVFP 129
+ +YL G+ S + +IT+G + P
Sbjct: 179 GKKVVIEEYLEGVEAS---ILSITDGKAIIP 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,632,824
Number of Sequences: 539616
Number of extensions: 3263954
Number of successful extensions: 6114
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6087
Number of HSP's gapped (non-prelim): 22
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)