Query 028541
Match_columns 207
No_of_seqs 107 out of 1047
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 13:07:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028541.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028541hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02885 nicotinate phosphorib 100.0 4E-55 8.8E-60 409.6 21.9 188 20-207 5-192 (545)
2 PRK12484 nicotinate phosphorib 100.0 3.2E-51 6.9E-56 376.8 21.6 177 26-207 4-180 (443)
3 TIGR01513 NAPRTase_put putativ 100.0 4E-51 8.6E-56 376.0 20.9 177 27-207 1-177 (443)
4 cd01570 NAPRTase_A Nicotinate 100.0 6.3E-50 1.4E-54 356.5 21.1 177 27-207 1-177 (327)
5 PRK09243 nicotinate phosphorib 100.0 1.3E-49 2.9E-54 368.2 21.8 183 21-207 4-186 (464)
6 PRK05321 nicotinate phosphorib 100.0 5E-49 1.1E-53 357.5 19.8 178 19-207 3-202 (400)
7 cd01401 PncB_like Nicotinate p 100.0 1.4E-48 3E-53 352.4 19.5 169 28-207 4-199 (377)
8 TIGR01514 NAPRTase nicotinate 100.0 6.4E-48 1.4E-52 349.3 20.0 174 24-207 1-203 (394)
9 COG1488 PncB Nicotinic acid ph 100.0 5.5E-48 1.2E-52 351.9 19.7 185 18-207 4-189 (405)
10 KOG2511 Nicotinic acid phospho 100.0 6E-48 1.3E-52 338.0 10.4 185 21-207 3-187 (420)
11 PHA02594 nadV nicotinamide pho 100.0 1.1E-42 2.3E-47 320.4 17.4 179 23-207 7-208 (470)
12 PRK09198 putative nicotinate p 100.0 1.6E-41 3.5E-46 312.7 18.4 177 25-207 6-204 (463)
13 cd01567 NAPRTase_PncB Nicotina 100.0 1.4E-40 3E-45 297.8 19.5 176 28-207 2-188 (343)
14 cd01569 PBEF_like pre-B-cell c 100.0 2.8E-39 6E-44 293.2 17.3 175 28-207 2-202 (407)
15 PRK07188 nicotinate phosphorib 99.9 1.9E-25 4.2E-30 200.6 14.0 150 23-207 12-161 (352)
16 PRK08662 nicotinate phosphorib 99.9 1.4E-24 3E-29 194.9 14.9 151 21-207 9-159 (343)
17 cd00516 PRTase_typeII Phosphor 99.9 1.2E-23 2.5E-28 183.2 14.8 141 31-207 1-142 (281)
18 cd01571 NAPRTase_B Nicotinate 99.9 1.1E-20 2.4E-25 167.0 17.5 141 28-207 2-142 (302)
19 cd01568 QPRTase_NadC Quinolina 99.4 1.4E-12 3.1E-17 113.7 13.3 122 46-206 24-146 (269)
20 cd01573 modD_like ModD; Quinol 99.3 2.1E-11 4.7E-16 106.6 12.3 121 46-205 24-146 (272)
21 TIGR00078 nadC nicotinate-nucl 99.3 8.8E-11 1.9E-15 102.4 13.3 121 46-206 22-143 (265)
22 cd01572 QPRTase Quinolinate ph 99.3 1.1E-10 2.4E-15 101.9 13.6 122 46-205 24-146 (268)
23 PRK05848 nicotinate-nucleotide 99.0 8.3E-09 1.8E-13 90.4 12.6 118 48-204 28-145 (273)
24 PRK08385 nicotinate-nucleotide 98.9 2.1E-08 4.6E-13 88.0 12.8 118 48-204 28-147 (278)
25 PRK07896 nicotinate-nucleotide 98.9 2.6E-08 5.6E-13 87.9 13.0 123 46-204 40-163 (289)
26 PRK05742 nicotinate-nucleotide 98.9 2.6E-08 5.7E-13 87.4 12.7 121 48-206 34-155 (277)
27 PRK09016 quinolinate phosphori 98.6 1.6E-06 3.4E-11 76.9 13.1 119 48-204 53-172 (296)
28 PRK07428 nicotinate-nucleotide 98.5 2.4E-06 5.3E-11 75.4 12.7 118 49-204 41-159 (288)
29 PRK08072 nicotinate-nucleotide 98.4 6.4E-06 1.4E-10 72.4 13.3 119 48-204 32-151 (277)
30 PRK06106 nicotinate-nucleotide 98.4 6.5E-06 1.4E-10 72.5 13.1 121 46-204 36-157 (281)
31 PLN02716 nicotinate-nucleotide 98.3 1.4E-05 3.1E-10 71.1 13.2 120 46-204 44-163 (308)
32 PRK06559 nicotinate-nucleotide 98.1 4.6E-05 9.9E-10 67.4 12.6 121 47-204 38-160 (290)
33 TIGR01334 modD putative molybd 97.9 0.00027 5.7E-09 62.3 12.9 118 46-203 28-148 (277)
34 PRK06543 nicotinate-nucleotide 97.9 0.00036 7.8E-09 61.6 12.9 120 46-204 31-152 (281)
35 PRK06096 molybdenum transport 97.7 0.00053 1.1E-08 60.6 11.8 121 46-204 29-150 (284)
36 PRK06978 nicotinate-nucleotide 97.7 0.0011 2.4E-08 58.8 13.1 119 48-204 50-169 (294)
37 PF02749 QRPTase_N: Quinolinat 97.7 0.00028 6.1E-09 51.5 7.7 75 46-158 13-88 (88)
38 COG0157 NadC Nicotinate-nucleo 97.3 0.0063 1.4E-07 53.5 12.8 121 46-204 30-151 (280)
39 KOG3008 Quinolinate phosphorib 95.1 0.059 1.3E-06 46.4 6.1 86 119-205 75-161 (300)
40 KOG1159 NADP-dependent flavopr 42.3 66 0.0014 31.0 5.9 64 106-186 405-472 (574)
41 KOG0030 Myosin essential light 40.3 15 0.00033 29.5 1.2 58 33-94 70-131 (152)
42 PF06888 Put_Phosphatase: Puta 37.0 93 0.002 26.7 5.6 58 64-125 40-99 (234)
43 PF08225 Antimicrobial19: Pseu 33.1 49 0.0011 17.9 2.1 14 68-81 8-21 (23)
44 PF03927 NapD: NapD protein; 29.8 1E+02 0.0022 21.8 3.9 22 114-141 28-50 (79)
45 PF14568 SUKH_6: SMI1-KNR4 cel 26.7 51 0.0011 23.8 2.0 28 86-113 1-28 (120)
46 PF13533 Biotin_lipoyl_2: Biot 25.0 92 0.002 19.8 2.8 23 120-142 17-39 (50)
47 smart00860 SMI1_KNR4 SMI1 / KN 24.2 1E+02 0.0023 21.3 3.3 30 84-113 2-31 (129)
48 KOG3303 Predicted alpha-helica 22.6 1E+02 0.0022 25.9 3.2 42 84-138 109-151 (192)
49 PRK10553 assembly protein for 21.4 2.1E+02 0.0046 20.7 4.4 23 114-142 30-54 (87)
50 COG5230 Uncharacterized conser 20.8 1.3E+02 0.0029 24.8 3.5 52 84-147 110-161 (194)
51 PF02186 TFIIE_beta: TFIIE bet 20.6 2.2E+02 0.0048 19.4 4.2 49 70-126 5-57 (65)
52 PF14567 SUKH_5: SMI1-KNR4 cel 20.1 99 0.0021 24.3 2.6 28 84-111 22-49 (132)
No 1
>PLN02885 nicotinate phosphoribosyltransferase
Probab=100.00 E-value=4e-55 Score=409.57 Aligned_cols=188 Identities=81% Similarity=1.402 Sum_probs=180.9
Q ss_pred CCCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCC
Q 028541 20 PTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGS 99 (207)
Q Consensus 20 ~~~~i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~ 99 (207)
++++|+.+|+||+||+||+|+||++++++.+++|+||+|+.|++++|+|++||+++|++|++++||+|||+||++.++.+
T Consensus 5 ~~~~~i~~LlTDlYklTM~~ay~~~~~~~~~avf~~f~R~~p~~~~~~v~aGL~~~l~~L~~l~Ft~edi~yL~~~~~~~ 84 (545)
T PLN02885 5 PTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLFFRKNPFGGEYTVFAGLEECLRFIANFKFTDDDIDFLRSVMPSG 84 (545)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEecCCCCCCcccHHHHHHHHHHHHhhCCCCHHHHHHHHhhcccc
Confidence 56778999999999999999999999988999999999999999999999999999999999999999999999987547
Q ss_pred CChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEee
Q 028541 100 CEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLE 179 (207)
Q Consensus 100 f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~d 179 (207)
|+++|++||+++++++|+|+|+|||+++||+||+|+|+|||+++++|||+||++||+++++||++++++.+++.+++|+|
T Consensus 85 f~~~Fl~yL~~~~~~~V~I~A~~EG~lvf~~eP~i~IeGp~~~~~LlEt~LL~iI~~~s~iAT~aar~~~aa~~~~~v~e 164 (545)
T PLN02885 85 CEDAFFDYLRGLDCSDVEVYAIPEGSVVFPRVPLMRIEGPLAVVQLLETTFLTLVNYASLVATNAARHRLVAGKSKVLLE 164 (545)
T ss_pred CCHHHHHHHHhCCCCCceEEecCCCcEecCCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999865799999
Q ss_pred ccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 180 FGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 180 FGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
||+||+||+++++.++|+||||||+|||
T Consensus 165 FG~RRaqg~d~~~~~~raa~igGf~gTS 192 (545)
T PLN02885 165 FGLRRAQGPDGGISASKYCYLGGFDATS 192 (545)
T ss_pred CCCccCcCccHHHHHHHHHHhCCceeeh
Confidence 9999999999999999999999999998
No 2
>PRK12484 nicotinate phosphoribosyltransferase; Provisional
Probab=100.00 E-value=3.2e-51 Score=376.81 Aligned_cols=177 Identities=37% Similarity=0.668 Sum_probs=170.5
Q ss_pred chhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHH
Q 028541 26 TPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFF 105 (207)
Q Consensus 26 ~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl 105 (207)
.+|+||+||+||+|+||++++ +.+|+|+||+|+.|+.++|+|++||+++|++|++++||+||++||++.+ +|+++||
T Consensus 4 ~~l~TD~Y~ltM~~~~~~~~~-~~~~~fe~~~R~~p~~~~~~v~aGl~~~l~~L~~~~ft~eei~yl~~~~--~f~~~f~ 80 (443)
T PRK12484 4 LALLTDLYEVTMANAYLREGM-SAPATFSLFYRKLPDGRGFLIAAGLADVVEFLEAFRFDEQDLRYLRGLN--QFSEEFL 80 (443)
T ss_pred cchHHHHHHHHHHHHHHHhCC-CCeEEEEEEECCCCCCCceehHHHHHHHHHHHhcCCCCHHHHHHHHHcC--CCCHHHH
Confidence 458999999999999999999 5679999999999988999999999999999999999999999999973 8999999
Q ss_pred HHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCC
Q 028541 106 DYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRA 185 (207)
Q Consensus 106 ~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~ 185 (207)
+||+++++.+ +|+|+|||+++||+||+|+|||||.++++|||+||++||+++++||+++|++.+++ +++++|||+||+
T Consensus 81 ~~L~~~~~~~-~I~A~~EG~~v~~~ep~l~Iegp~~e~~llET~lL~il~~~s~iATka~ri~~aa~-~~~l~dFG~Rr~ 158 (443)
T PRK12484 81 AWLAGLRFTG-DVRAVPEGTVVFPNEPLLEVTAPLIEAQLVETFLLNQINHQSLIASKAARCVLAAA-GRPVVDFGARRA 158 (443)
T ss_pred HHHHhCCCCc-eEEEEeCCeeecCCcEEEEEEEchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEECCCCCC
Confidence 9999999975 99999999999999999999999999999999999999999999999999999987 799999999999
Q ss_pred CCcchHHHHHHHHhhcCccccC
Q 028541 186 QGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 186 ~~~~~~~~~~raa~igG~~gtS 207 (207)
||++++..++|+|++|||+|||
T Consensus 159 ~~~~~a~~~~raa~i~gf~GTS 180 (443)
T PRK12484 159 HGTDAACYVARASYLAGAAGTS 180 (443)
T ss_pred CChHHHHHHHHHHHhcCcceee
Confidence 9999999999999999999998
No 3
>TIGR01513 NAPRTase_put putative nicotinate phosphoribosyltransferase. Most members of this family are Gram-positive bacteria. An additional set of mutually closely related archaeal sequences score between the trusted and noise cutoffs.
Probab=100.00 E-value=4e-51 Score=375.98 Aligned_cols=177 Identities=50% Similarity=0.884 Sum_probs=170.2
Q ss_pred hhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHH
Q 028541 27 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFD 106 (207)
Q Consensus 27 ~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~ 106 (207)
+|+||+|||||+|++|++++++.+|+|+||+|+.|++++|+|++||+++|++|++++||+||++||++.+ +|+++||+
T Consensus 1 ~l~TD~Y~ltM~~~~~~~~~~~~~~~fe~~~R~~p~~~~~~v~~GL~~~l~~L~~~~ft~eei~yl~~~~--~f~~~f~~ 78 (443)
T TIGR01513 1 ALLTDLYELTMAQGYFREGKANQPAVFEVFFRKLPFGRGYAVFAGLEDLLEFLENFRFDAEDIEYLASLG--IFDDAFLD 78 (443)
T ss_pred CcchhHHHHHHHHHHHHhCCCCceEEEEEEECCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHhCC--CCCHHHHH
Confidence 3789999999999999999965579999999999999999999999999999999999999999999984 79999999
Q ss_pred HHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCC
Q 028541 107 YLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQ 186 (207)
Q Consensus 107 ~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~ 186 (207)
||++|++. ++|+|+|||+++||+||+|+|+|||.++++|||+||++||+++++||+++|++.+++ +++++|||+||+|
T Consensus 79 ~L~~~~~~-~~I~A~~EG~~v~~~ep~l~Iegp~~~~~llEt~lL~~i~~~s~iATka~r~~~aa~-~~~l~dFG~Rr~~ 156 (443)
T TIGR01513 79 YLREFRFS-GTVRALPEGSLVFPNEPLLQVEGPLIEAQLLETLVLNIINFQTLIATKAARIVLAAG-GKPLLEFGLRRAQ 156 (443)
T ss_pred HHHhCCCC-cEEEEecCCccccCCcEEEEEEEchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCeEEecCCCCCC
Confidence 99999996 899999999999999999999999999999999999999999999999999999986 7899999999999
Q ss_pred CcchHHHHHHHHhhcCccccC
Q 028541 187 GPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 187 ~~~~~~~~~raa~igG~~gtS 207 (207)
|+++++.++|+|+||||+|||
T Consensus 157 ~~~~~~~~~raa~igG~~GTS 177 (443)
T TIGR01513 157 GPDAALKAARAAYIGGADGTS 177 (443)
T ss_pred ccHHHHHHHHHHHcCCceeec
Confidence 999999999999999999998
No 4
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi).
Probab=100.00 E-value=6.3e-50 Score=356.48 Aligned_cols=177 Identities=56% Similarity=0.997 Sum_probs=169.4
Q ss_pred hhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHH
Q 028541 27 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFD 106 (207)
Q Consensus 27 ~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~ 106 (207)
+|+||+||+||+|+++++++++++|+|+||+|+.|++++|+|++||+++|++|++++||+||++||++.+ +|+++||+
T Consensus 1 ~l~tD~Y~ltm~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~v~~gl~~~l~~L~~l~~t~~ei~~l~~~~--~~~~~~~~ 78 (327)
T cd01570 1 ALLTDLYQLTMAQAYWKEGKHNKPAVFELFFRKLPFGGGYAVFAGLEELLEYLENFRFTEEDIDYLRSLG--IFDEEFLD 78 (327)
T ss_pred CcchhHHHHHHHHHHHHcCCCCCeEEEEEEECCCCCCCcccHHHHHHHHHHHHhcCCCCHHHHHHHHhCC--CCCHHHHH
Confidence 3789999999999999999448999999999999988999999999999999999999999999999974 79999999
Q ss_pred HHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCC
Q 028541 107 YLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQ 186 (207)
Q Consensus 107 ~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~ 186 (207)
||+++++. ++|+++|||+++++++|+|+|+|||+++++|||++|++||+++.+||++.+++.+++ +++++|||+||+|
T Consensus 79 ~L~~~~~~-v~i~a~~EG~~v~~~~pvl~IeGp~~~~~l~Et~lL~il~~~s~iATka~~~~~~~~-~~~~~dFG~Rr~~ 156 (327)
T cd01570 79 YLRGFRFT-GTIYAIPEGEVVFPNEPLLTVEGPLIEAQLLETLLLNLINFQTLIATKAARVRLAAG-GRPLLEFGLRRAQ 156 (327)
T ss_pred HHHhCCCC-ceEEEecCCceecCCcEEEEEEEcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CCEEEECCCCCCC
Confidence 99999975 899999999999999999999999999999999999999999999999999999886 7999999999999
Q ss_pred CcchHHHHHHHHhhcCccccC
Q 028541 187 GPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 187 ~~~~~~~~~raa~igG~~gtS 207 (207)
|.++++.++|+|++|||.|||
T Consensus 157 s~~~~~~~~~aa~iggf~gTS 177 (327)
T cd01570 157 GPDAALSAARAAYIGGFDGTS 177 (327)
T ss_pred ccHHHHHHHHHHhcCCceeee
Confidence 999999999999999999998
No 5
>PRK09243 nicotinate phosphoribosyltransferase; Validated
Probab=100.00 E-value=1.3e-49 Score=368.17 Aligned_cols=183 Identities=51% Similarity=0.875 Sum_probs=174.1
Q ss_pred CCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCC
Q 028541 21 TNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSC 100 (207)
Q Consensus 21 ~~~i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f 100 (207)
.++++..|+||+||+||+++||+++|++.+|+|+||+|+.|+.++|.|++||+++|++|++++||+||++||++. . +|
T Consensus 4 ~~~~~~~L~TD~Ykltm~~~~~~~~~~~~~~~f~~~~R~~p~~~~~~v~aGl~~~l~~L~~~~ft~~ei~~l~~~-~-~f 81 (464)
T PRK09243 4 YNDDSLALLTDLYELTMAQAYLRDGIHNRRAVFELFFRKLPFGRGYAVFAGLERLLEYLENLRFTEEDIEYLRSL-G-IF 81 (464)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcCCCCCcchHHHHHHHHHHHHHHhCCCCHHHHHHHHhc-C-CC
Confidence 344566788999999999999999998889999999999998889999999999999999999999999999987 3 89
Q ss_pred ChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeec
Q 028541 101 EDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEF 180 (207)
Q Consensus 101 ~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dF 180 (207)
+++||+||+++++. ++|+++|||+++++++|+|+|+|||.++++|||+||++||+.+.+||++++++++++ +++++||
T Consensus 82 ~~~f~~~L~~~~f~-~~I~a~pEG~~v~~~epvl~IeGp~~~~~l~Et~lL~il~~~s~iATka~r~~~~a~-~~~v~dF 159 (464)
T PRK09243 82 DEDFLDYLRNFRFT-GDVRAVPEGELVFPNEPLLRVEGPLAEAQLLETLLLNIINFQTLIATKAARIVSAAG-GRPLLEF 159 (464)
T ss_pred CHHHHHHHHhCCCC-CeEEEEeCCccccCCcEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCeEEec
Confidence 99999999999997 499999999999999999999999999999999999999999999999999999986 7999999
Q ss_pred cCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 181 GLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 181 GtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
|+||+||+++++.++|||++|||+|||
T Consensus 160 G~Rr~~~~~~a~~~~raa~iggf~gTS 186 (464)
T PRK09243 160 GSRRAQGPDAAVWAARAAYIGGFDATS 186 (464)
T ss_pred ccccCCchHHHHHHHHHHhcCCccccc
Confidence 999999999999999999999999998
No 6
>PRK05321 nicotinate phosphoribosyltransferase; Provisional
Probab=100.00 E-value=5e-49 Score=357.54 Aligned_cols=178 Identities=24% Similarity=0.364 Sum_probs=160.8
Q ss_pred CCCCCCcchhh-hhHHHHHHHHHHHHhCCCCceEEEEEEeecCC-CCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhC
Q 028541 19 GPTNPMVTPLL-NDLYQFTMAYAYWKAGKHDERAVFDLYFRKNP-FGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSL 96 (207)
Q Consensus 19 ~~~~~i~~~Ll-TD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~-~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~ 96 (207)
+..+|||++++ ||+|||||+|+||+++| +.+|+|+||+|+.| +.++|+ .||+++|++|++++||+||++||++ |
T Consensus 3 ~~~~~ii~slLdTDlYklTM~~a~~~~~~-~~~~~f~~f~R~~~~~~~~~~--~gl~~~i~~l~~l~ft~eei~yL~~-~ 78 (400)
T PRK05321 3 WKADPIIRSLLDTDFYKLTMQQAVLHHYP-DAQVEYEFICRNDEVDLAEYI--DEIREQLDHLCTLRLTDDELDYLRG-L 78 (400)
T ss_pred cccchHHHHhHhhHHHHHHHHHHHHHhCC-CCeEEEEEEECCCCCcCchHH--HHHHHHHHHHHhCCCCHHHHHHHHh-C
Confidence 44567888855 99999999999999997 79999999999998 888877 5999999999999999999999976 6
Q ss_pred CCCCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHH---------------HHHH
Q 028541 97 PGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVT 161 (207)
Q Consensus 97 ~~~f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~---------------~~~A 161 (207)
+ +|+++|++||++|++++-+|++.+|| ++|+|+|+|||.++++||||||++||+. +.++
T Consensus 79 ~-~~~~~fl~~L~~frf~~~~v~~~~eg-----~~~~i~I~Gp~~~~~L~Et~lL~iise~~~~~~~~~~~~~~a~~~ia 152 (400)
T PRK05321 79 P-FFKPDFLDWLRLFRLNPYEVTVSIDD-----GQLDIRIEGPWLETILWEVPLLAIISELYFRARSPEVLYAQAKRRLW 152 (400)
T ss_pred C-CCCHHHHHHHHhCCCCccEEEEEcCC-----CeEEEEEEEeHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHH
Confidence 7 99999999999999987788999888 8899999999999999999999999983 3467
Q ss_pred hHHHHHHHHhC--CCCcEeeccCCCCCCcchH---HHHHHHHhhcCccccC
Q 028541 162 TNAARHRFVAG--KSKMLLEFGLRRAQGPDGG---IGASKYCYIGGFDATR 207 (207)
Q Consensus 162 T~a~r~~~~a~--~~~~~~dFGtRr~~~~~~~---~~~~raa~igG~~gtS 207 (207)
||+.|++.+ + .+++++|||+|||||++++ +.++|++++|||+|||
T Consensus 153 tKa~r~~~a-~~~~~~~~~eFGtRR~~~~~~~~~~v~a~~~~~~ggf~GTS 202 (400)
T PRK05321 153 EKIELLKAL-PDLSGFKIADFGTRRRFSFEWQEEVVEALKEGLPGAFVGTS 202 (400)
T ss_pred HHHHHHHhc-cccCCCeEEEeccccccChhhHHHHHHHHHHHhhcCCceeh
Confidence 888888766 3 2689999999999999986 8899999999999998
No 7
>cd01401 PncB_like Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria, archea and funghi.
Probab=100.00 E-value=1.4e-48 Score=352.36 Aligned_cols=169 Identities=25% Similarity=0.297 Sum_probs=156.9
Q ss_pred hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCC-CCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHH
Q 028541 28 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPF-GGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFD 106 (207)
Q Consensus 28 LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~-~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~ 106 (207)
|+||+|||||+|+||+++| +++|+|+|++|+.|+ +++| ++||+++|++|++++||+||++||++.|+ +|+++|++
T Consensus 4 LdTDlYklTM~qa~~~~~~-~~~a~f~f~~R~~p~~~~~~--~~gl~~~i~~l~~l~ft~~el~yL~~~~~-~~~~~fl~ 79 (377)
T cd01401 4 LDTDLYKLTMQQAVLHHYP-DVQVTYEFTNRSPEDFLEEA--AEALREQIDHLANLRFSEEELAYLRRSLP-FLKPDYLD 79 (377)
T ss_pred hhhHHHHHHHHHHHHHhCC-CCeEEEEEEECCCCCcchhH--HHHHHHHHHHHHhCCCCHHHHHHHHhccC-CCCHHHHH
Confidence 6699999999999999999 579999999999987 8887 59999999999999999999999998877 99999999
Q ss_pred HHhcCCCCceEEEEeeCCeeecC----CccEEEEEeccchhHHHHHHHHHHHHH---------------HHHHHhHHHHH
Q 028541 107 YLRGINCSDVEVHAITEGSVVFP----KVPLLRVEGPVAVVQLLETPFVNLINY---------------ASLVTTNAARH 167 (207)
Q Consensus 107 ~L~~~~~~~v~I~a~~EG~lv~~----~eP~i~IeG~~~~~~l~Et~lL~ii~~---------------~~~~AT~a~r~ 167 (207)
||++||++ +||..++| ++|+|+|+|||.++++||||||++||| .+.++||+.|+
T Consensus 80 ~L~~frf~-------~e~~~v~~~~~~~~~~i~i~Gp~~~~~L~Et~lL~iise~~~~~~~~~~~~~~~~~~~atKa~r~ 152 (377)
T cd01401 80 YLELFRLN-------PEEVVVRLDTGKGQLDIRISGPWKDTILYEVPLLAIVSEVYFRFRDADWDYEEQLEKLEEKLERL 152 (377)
T ss_pred HHhcCCCC-------cCeeEEecCCCCCeEEEEEEEeHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHH
Confidence 99999996 47888887 899999999999999999999999998 45688999999
Q ss_pred HHHhC----CCCcEeeccCCCCCCcch---HHHHHHHHhhcCccccC
Q 028541 168 RFVAG----KSKMLLEFGLRRAQGPDG---GIGASKYCYIGGFDATR 207 (207)
Q Consensus 168 ~~~a~----~~~~~~dFGtRr~~~~~~---~~~~~raa~igG~~gtS 207 (207)
+.++. .+++++|||+|||||+++ ++.++|++++|||+|||
T Consensus 153 ~~~a~~~~~~~~~~~eFGtRRr~~~~~q~~~~~~~raa~~ggf~GTS 199 (377)
T cd01401 153 LEEAKRRDLNGFRFSDFGTRRRFSYEVQETVLKGLKQAAPGYLTGTS 199 (377)
T ss_pred HHHhhcccCCCCeEEEecccccCChHHHHHHHHHHHHHhhccCceeh
Confidence 99882 279999999999999988 78899999999999998
No 8
>TIGR01514 NAPRTase nicotinate phosphoribosyltransferase. This model represents nicotinate phosphoribosyltransferase, the first enzyme in the salvage pathway of NAD biosynthesis from nicontinate (niacin). Members are primary proteobacterial but also include yeasts and Methanosarcina acetivorans. A related family, apparently non-overlapping in species distribution, is TIGR01513. Members of that family differ in substantially in sequence and have a long C-terminal extension missing from this family, but are proposed also to act as nicotinate phosphoribosyltransferase (see model TIGR01513).
Probab=100.00 E-value=6.4e-48 Score=349.31 Aligned_cols=174 Identities=24% Similarity=0.348 Sum_probs=155.5
Q ss_pred Ccch-hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCC-CCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCC
Q 028541 24 MVTP-LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNP-FGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCE 101 (207)
Q Consensus 24 i~~~-LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~-~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~ 101 (207)
||+| |+||+|||||+|+||+++| +.+|+|+||+|+.| +.++|+ +||+++|++|++++||+||++||++.|+ +|+
T Consensus 1 ii~slLdTDlYklTM~qa~~~~~~-~~~~~f~f~~R~~p~~~~~~~--~gl~~~i~~l~~l~ft~eel~yL~~~~~-~~~ 76 (394)
T TIGR01514 1 IIRSLLDTDLYKITMHQAVFHNFP-DVHVTYEFICRSSQLFLKEAA--EALREEISALGNLRFTDDEIEYLKQELP-YLK 76 (394)
T ss_pred CcccchhhHHHHHHHHHHHHHhCC-CceEEEEEEECCCCCcchhHH--HHHHHHHHHHHHCCCCHHHHHHHHhccC-CCC
Confidence 4555 6699999999999999998 79999999999988 777755 9999999999999999999999999877 999
Q ss_pred hhHHHHHhcCCCCc---eEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHH---------------HHHHhH
Q 028541 102 DGFFDYLRGINCSD---VEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVTTN 163 (207)
Q Consensus 102 ~~fl~~L~~~~~~~---v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~---------------~~~AT~ 163 (207)
++|++||++|+|++ |+|++++||++ +|+|+|||.+++|||||||++|||. +.++||
T Consensus 77 ~~fl~~L~~frf~~e~~v~i~~~~eg~~------~i~i~Gp~~~~~L~EtplLaiine~~~~~~~~~~~~~~~~~~iatK 150 (394)
T TIGR01514 77 SDYIDYLRNFRFHPEEQVEVGIDDKGKL------DIRISGSWRDTILYEIPLLAIISELYFRFRDAEADYEQQLEVLESK 150 (394)
T ss_pred HHHHHHHHhCCCCCCceeEEeeCCCCcE------EEEEEeehHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Confidence 99999999999864 57887787754 8999999999999999999999993 448999
Q ss_pred HHHHHHHhC------CCCcEeeccCCCCCCcchHH---HHHHHHhhcCccccC
Q 028541 164 AARHRFVAG------KSKMLLEFGLRRAQGPDGGI---GASKYCYIGGFDATR 207 (207)
Q Consensus 164 a~r~~~~a~------~~~~~~dFGtRr~~~~~~~~---~~~raa~igG~~gtS 207 (207)
+.|++.+++ .+++++|||||||||++++. .++|++++|||+|||
T Consensus 151 a~rl~~~a~~~~~~~~~~~~~eFGtRRr~s~~~q~~~~~~~r~a~~~gf~GTS 203 (394)
T TIGR01514 151 LDQLKAEIAAETMFENGFRFSEFGTRRRFSLEVQDLVTQGLKQAAPSWLLGTS 203 (394)
T ss_pred HHHHHHHhhcccccCCCCeeEeecccccccHHHHHHHHHHHHHHhhccCceec
Confidence 999998873 26899999999999998854 458999999999998
No 9
>COG1488 PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism]
Probab=100.00 E-value=5.5e-48 Score=351.92 Aligned_cols=185 Identities=43% Similarity=0.754 Sum_probs=172.4
Q ss_pred CCCCCCCcch-hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhC
Q 028541 18 SGPTNPMVTP-LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSL 96 (207)
Q Consensus 18 ~~~~~~i~~~-LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~ 96 (207)
..+.++++++ |+||+||+||+|+|++++|++..|+|++++|+.|+..+|++++|++++|++|++|+||+||++||+++
T Consensus 4 ~~~~~~~i~~~L~TD~Ykltm~q~~~~~~~~~~~v~~e~~~R~~p~~~~~~~~~gl~~~l~~l~~l~fs~ee~~~L~~~- 82 (405)
T COG1488 4 TFKSEPDIKSLLDTDLYKLTMLQAYLHDGPNNVTVVFEFFFRKLPFLGGYAVFAGLEEVLELLENLRFSEEEIAYLRSL- 82 (405)
T ss_pred ccchhHHHhhhhHhHHHHHHHHHHHHhhCCCccEEEEEEEecCCcccchHHHHHHHHHHHHHHhhcCCCHHHHHHHhhc-
Confidence 3344455554 77999999999999999996589999999999998999999999999999999999999999999998
Q ss_pred CCCCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCc
Q 028541 97 PGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKM 176 (207)
Q Consensus 97 ~~~f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~ 176 (207)
+ +++++|++||+ ++ +++|+++|||++++|+||+|+|+|||.+|++|||++|+|||+.+.++|++.|++.+++++++
T Consensus 83 ~-~~~~~fl~~L~--~f-~~~i~a~~eg~~~~~~ep~l~i~G~~~e~~l~Et~lL~ii~~~~~iatka~r~~~~a~~~~~ 158 (405)
T COG1488 83 P-FFKPDFLNYLR--RF-PLDIYAVPEGTVVFPNEPVLRIEGPYLETILLETPLLGIINEASLIATKAARVKDAAGKGFP 158 (405)
T ss_pred c-cccHHHHHHHh--hC-CCceEEEeccccccCCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCe
Confidence 5 99999999999 55 47999999999999999999999999999999999999999999999999999999944799
Q ss_pred EeeccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 177 LLEFGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 177 ~~dFGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
|+|||+||+|+.+++.+++|||++|||+|||
T Consensus 159 v~dFGtRr~~~~~~~~~~~raa~igg~~GtS 189 (405)
T COG1488 159 VLDFGTRRRHSADAQPWIGRAAYIGGFDGTS 189 (405)
T ss_pred EEeccCcccccchhHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999998
No 10
>KOG2511 consensus Nicotinic acid phosphoribosyltransferase [Coenzyme transport and metabolism]
Probab=100.00 E-value=6e-48 Score=338.02 Aligned_cols=185 Identities=54% Similarity=0.931 Sum_probs=177.3
Q ss_pred CCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCC
Q 028541 21 TNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSC 100 (207)
Q Consensus 21 ~~~i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f 100 (207)
.+++.+.|+||+||+||.++||+++| |.+|+|++++|++|++++|-+++||+|+|..|.+|+||+|||+|+++.|| +.
T Consensus 3 e~~~vspL~tDlYkiTM~yA~wk~~~-de~~vy~~~~R~npf~g~~~~f~~Lee~irfl~N~~lt~eei~~lkk~lP-~~ 80 (420)
T KOG2511|consen 3 EPPMVSPLDTDLYKITMAYAVWKAKP-DERVVYKYTNRSNPFGGNYEAFNWLEEQIRFLANLKLTDEEIDYLKKELP-YL 80 (420)
T ss_pred CCcccchhhhhHHHHHHHHHHHhhCC-CCceEEEeeecCCCCCchHHHHHHHHHHHHHHhhcCCCHHHHHHHHHhCC-CC
Confidence 34577889999999999999999987 89999999999999999999999999999999999999999999999999 99
Q ss_pred ChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeec
Q 028541 101 EDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEF 180 (207)
Q Consensus 101 ~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dF 180 (207)
++.|.+||++..+..+.+++++||+++||+.|.|+|+|||..++|+|||+|++|||+++++|++.+.+.++++...++||
T Consensus 81 eeaf~eyl~~l~~s~~~~~aIsegSvvf~k~pli~i~Gp~~~~~l~E~plLnLvs~a~~~~~da~~~r~~~g~k~~~leF 160 (420)
T KOG2511|consen 81 EEAFYEYLRGLNCSDHPEEAISEGSVVFEKKPLIRIEGPWKVTILYEIPLLNLVSEAYFKFVDADWHREVQGEKAEFLEF 160 (420)
T ss_pred hHHHHHHHhhcCCCcCchhhcccCceeccCCceEEEecchhheeeeechHHHHhhhHHheeeccccchhccchhhHHhhh
Confidence 99999999998887788999999999999999999999999999999999999999999999999999998766789999
Q ss_pred cCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 181 GLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 181 GtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
|+|||+|+++++.+.+..|+|||+|||
T Consensus 161 G~RR~rgp~G~m~Askycy~ggf~~TS 187 (420)
T KOG2511|consen 161 GTRRRRGPQGAMKASKYCYLGGFLGTS 187 (420)
T ss_pred hhhhccCCccchhhhcccccccccchh
Confidence 999999999999999999999999998
No 11
>PHA02594 nadV nicotinamide phosphoribosyl transferase; Provisional
Probab=100.00 E-value=1.1e-42 Score=320.42 Aligned_cols=179 Identities=21% Similarity=0.269 Sum_probs=162.8
Q ss_pred CCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHH-HhcCCCCHHHHHHHHhhCCC---
Q 028541 23 PMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRF-IANFKLTEEEITFVRDSLPG--- 98 (207)
Q Consensus 23 ~i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~-L~~l~ft~eei~~L~~~~~~--- 98 (207)
+++..|+||+||+||+++|++. ...++|++++|+.|+. +++|++|||+.|+. +.+ +||+++|+|+++.++.
T Consensus 7 ~~n~~L~tD~Yk~th~~qYp~~---~~~~~~~~~~R~~~~~-~~~vf~GLq~~i~~~l~~-~~t~~~i~~~~~~~~~~~g 81 (470)
T PHA02594 7 NVNIILMTDSYKLSHWSQYPKG---TDYVMFYLEPRGGKFF-DKVVVFGIQYFVKKYFFE-PITMEVVEEAHELVKAHLG 81 (470)
T ss_pred ccchhHhhhhhHHHHHHhCCCC---CcEEEEEEEecCCCCC-CEEEEeeHHHHHHHHHhc-CCCHHHHHHHHHhhhhccC
Confidence 3455688999999999998864 4689999999999875 78999999999997 888 9999999999997531
Q ss_pred --CCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEecc----chhHHHHHHHHHHHHHHHHHHhHHHHHHHHhC
Q 028541 99 --SCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPV----AVVQLLETPFVNLINYASLVTTNAARHRFVAG 172 (207)
Q Consensus 99 --~f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~----~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~ 172 (207)
.|+++||+||+++++.|++|+|+|||++|||+||+|+||||. |+++++||.||++||+++++||+|+|+|++++
T Consensus 82 ~~~f~~~~~~~L~~~~~~p~~I~AvpEGtvvf~~~Pll~Ve~~~~~f~w~~~~lET~lL~~i~~~s~vAT~A~r~~~~~~ 161 (470)
T PHA02594 82 KDVFNREHWEALHDLGYLPIEVRAVPEGTVVPVKVPVLTIENTHPDFFWLAGYLETVILRGVWYPSTVATLSRECKKILK 161 (470)
T ss_pred CCccCHHHHHHHHhCCCCcceEEEecCCceecCCCCEEEEEeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999999999999999999999999999998 59999999999999999999999999999964
Q ss_pred -------CC------CcEeeccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 173 -------KS------KMLLEFGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 173 -------~~------~~~~dFGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
++ ++++|||+||+||.+++..+ ++|+++||.|||
T Consensus 162 ~~~~~t~~~~~~~~~~~l~DFG~Rra~g~eaa~~~-~aAhl~gF~gTd 208 (470)
T PHA02594 162 KYLKETSDNEDEVLDFQLHDFGARGMSSGESAALG-GLAHLYNFKGTD 208 (470)
T ss_pred HHhhhccCccccccCceeeeccCCCCCChHHHHHH-HHHHhcCCcccc
Confidence 23 58999999999999999998 999999999997
No 12
>PRK09198 putative nicotinate phosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.6e-41 Score=312.67 Aligned_cols=177 Identities=18% Similarity=0.174 Sum_probs=159.0
Q ss_pred cchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHH-HHhcCCCCHHHHHHHHhhC---CCCC
Q 028541 25 VTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIR-FIANFKLTEEEITFVRDSL---PGSC 100 (207)
Q Consensus 25 ~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~-~L~~l~ft~eei~~L~~~~---~~~f 100 (207)
+..|+||+||+||+++| |++.+++|++|.|+.|+..+|+|++||+++|+ +|+++ ||+++++|+++.. ...|
T Consensus 6 ~~~L~TD~Yklth~~~Y----~~~~~~vf~~f~rr~p~~~~~~v~~GL~~~l~~yl~~~-ft~~~i~~~~~~~~~~~~~f 80 (463)
T PRK09198 6 NPILNTDSYKASHRLQY----PPGTTYLYSYLESRSGGRYDKVVFFGLQYFLKEYLIQP-ITEAFIDEAKALLVAHGLPF 80 (463)
T ss_pred chhHhHhhHHHHHHHhc----cCCCcEEEEEEEEeCCCCCCeEEEEEHHHHHHHHHHhc-CCHHHHHHHHhhhhhccCcc
Confidence 44588999999999998 34678999999999888889999999999999 89999 9999999999874 1249
Q ss_pred ChhHHHHHhc-CC-CCceEEEEeeCCeeecCCccEEEEEeccchhH----HHHHHHHHHHHHHHHHHhHHHHHHHHhCC-
Q 028541 101 EDGFFDYLRG-IN-CSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQ----LLETPFVNLINYASLVTTNAARHRFVAGK- 173 (207)
Q Consensus 101 ~~~fl~~L~~-~~-~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~----l~Et~lL~ii~~~~~~AT~a~r~~~~a~~- 173 (207)
++++|+++.. +. ..+++|+|+|||++|||+||+|+|+||..+++ ++||.||++||+++++||+|+|+|+++++
T Consensus 81 ~~~~~~~~~~~~~g~~p~~I~AvpEGtvv~~~~Pll~V~~~~~e~~wL~~~lET~lL~~i~~~s~vAT~A~r~~~~~~~~ 160 (463)
T PRK09198 81 NRAGWRRIVDKYGGYLPLRIKAVPEGSVVPVHNVLMTIENTDPEFFWLPNYLETLLLRNVWYPSTVATISWEYKQLIRQY 160 (463)
T ss_pred CHHHHHHHHHhcCCCCceEEEEecCCceecCCCCEEEEEeCcHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998888776 43 24799999999999999999999999999988 69999999999999999999999998752
Q ss_pred -----------CCcEeeccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 174 -----------SKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 174 -----------~~~~~dFGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
+++++|||+||+||.+++..++ +|++|||.|||
T Consensus 161 ~~~t~~~~~~~~~~l~dFG~Rr~~~~eaa~~~~-aA~l~gF~GTd 204 (463)
T PRK09198 161 LEKTADDLDFLPFQLHDFGARGMSSLESAALGG-AAHLVSFLGTD 204 (463)
T ss_pred hhhcccccccCCCeEEecCCCCCCchHHHHHHH-HHHHhCCCccc
Confidence 6899999999999999998888 99999999997
No 13
>cd01567 NAPRTase_PncB Nicotinate phosphoribosyltransferase (NAPRTase) family. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products.
Probab=100.00 E-value=1.4e-40 Score=297.82 Aligned_cols=176 Identities=41% Similarity=0.699 Sum_probs=161.5
Q ss_pred hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHH
Q 028541 28 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDY 107 (207)
Q Consensus 28 LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~ 107 (207)
|+||+||+||++++++.++ +..|+|+|++|+.|+..++.+++||+++|++|++++||++|++||++. . .+...|..+
T Consensus 2 L~TD~Yk~tm~~~~~~~~~-~~~v~~~~~~R~~~~~~~~~v~~gl~~~l~~l~~~~~~~~~~~~l~~~-~-~~~~~~~~~ 78 (343)
T cd01567 2 LDTDLYKLTMMQAYLYPYP-NTRVVFEFTFRSNPFGGDYIVFAGLEEVLKLLENLRFTEEEIEYLKKL-L-IFGEFFLYL 78 (343)
T ss_pred ccchHHHHHHHHHHHhCCC-CeEEEEEEEEcCCCCCCCeeHHHHHHHHHHHHHhCCCCHHHHHHHHhc-C-CCcHHHHHH
Confidence 6799999999999977776 799999999999887677889999999999999999999999999987 3 677777777
Q ss_pred HhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-----------CCc
Q 028541 108 LRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK-----------SKM 176 (207)
Q Consensus 108 L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~-----------~~~ 176 (207)
+...++ +++|++++||+++++++|+|+|+|||.++++|||+||+++++.+.+||++.+.+.++.. +++
T Consensus 79 ~~~~~~-~~~i~a~~eG~~~~~~~~~i~IeG~~~~~~~~Et~lL~i~~~~t~~at~~~~~~~~a~~~~~~~~~~~~~~~~ 157 (343)
T cd01567 79 LFLGKL-PLEIYALPEGTVVFPKEPLLTIEGPWPEAGLLETPLLAIWNEATSIATKAARKKLAAGGLLETKDNLEELGFK 157 (343)
T ss_pred hhcCCC-ceEEEEeCCcccccCCCeEEEEEechHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccccccCCCe
Confidence 765444 69999999999999999999999999999999999999999999999999998887752 389
Q ss_pred EeeccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 177 LLEFGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 177 ~~dFGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
++|||+||++|++.++.+++|+++|||.|||
T Consensus 158 ~~dFGtRr~~s~~~~~~~~~a~~~~~~~gtS 188 (343)
T cd01567 158 LHDFGTRRRHSPEAALSGGRAALIGGFGGTS 188 (343)
T ss_pred EEecCCCCcCChHHHHHHHHHHhcCCCCccH
Confidence 9999999999999999999999999999998
No 14
>cd01569 PBEF_like pre-B-cell colony-enhancing factor (PBEF)-like. The mammalian members of this group of nicotinate phosphoribosyltransferases (NAPRTases) were originally identified as genes whose expression is upregulated upon activation in lymphoid cells. In general, nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis.
Probab=100.00 E-value=2.8e-39 Score=293.18 Aligned_cols=175 Identities=20% Similarity=0.212 Sum_probs=155.8
Q ss_pred hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHH-H----HHHHhhCC---CC
Q 028541 28 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEE-I----TFVRDSLP---GS 99 (207)
Q Consensus 28 LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~ee-i----~~L~~~~~---~~ 99 (207)
|+||+||+||.++|++ +.+.+|++|.|+.|...+|+|++|||..|+.+...+||+++ + ++++.+.. ..
T Consensus 2 L~TD~Yk~th~~qYp~----gt~~vfs~f~~R~~~~~~~~v~~GLq~~l~~~l~~~f~~~~~i~~a~~~~~~~~~~~~~~ 77 (407)
T cd01569 2 LATDSYKVSHRLQYPP----GTTAVYSYLEPRGGKYYDQTVFFGLQYFLKKYLIDPVNRDFFIDEAEAVFEAHFGMNDLP 77 (407)
T ss_pred cccchHHHHHHHhccC----CCceEEEEEEecCCCCCCeEEEeeHHHHHHHHHhcCCCHHHhHHHHHHHHHhcCcccccC
Confidence 6799999999999854 46799999999887667899999999999999999999999 4 46666521 15
Q ss_pred CChhHHHHHhc-CC-CCceEEEEeeCCeeecCCccEEEEEeccchh----HHHHHHHHHHHHHHHHHHhHHHHHHHHhCC
Q 028541 100 CEDGFFDYLRG-IN-CSDVEVHAITEGSVVFPKVPLLRVEGPVAVV----QLLETPFVNLINYASLVTTNAARHRFVAGK 173 (207)
Q Consensus 100 f~~~fl~~L~~-~~-~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~----~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~ 173 (207)
|++++|+||.+ ++ ..+++|+|+|||++|||++|+++||||..++ +++||.||++||+++++||+|+|+|.++++
T Consensus 78 f~~~~~~~i~~l~~~~lp~~I~AvpEGtvv~~~~Pll~Ve~t~~e~~Wl~~~lET~lL~~iw~~s~vAT~A~r~k~~~~~ 157 (407)
T cd01569 78 FNEDGWRHILELHDGYLPIEIRAVPEGTVVPTKNVLMTVENTDPDFFWLTNYLETILLRNVWYPSTVATISREYKKILRK 157 (407)
T ss_pred cCHHHHHHHHHHcCCCCceEEEEecCCceecCCCCEEEEEecchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999998 33 3579999999999999999999999999777 999999999999999999999999999852
Q ss_pred ------------CCcEeeccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 174 ------------SKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 174 ------------~~~~~dFGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
+++++|||+||+||.+++..++ +|+++||.|||
T Consensus 158 ~~~~t~~~~~~~~~~l~DFG~Rra~~~eaa~~~~-aAhL~~F~gTd 202 (407)
T cd01569 158 YAKETSDNLEFLPFQLHDFGMRGMSSLESAALGG-AAHLVNFKGTD 202 (407)
T ss_pred HhhhcccccccCCCeEEecCCCCCCchHHHHHHH-HHHHcCCccch
Confidence 6899999999999999999999 89999999997
No 15
>PRK07188 nicotinate phosphoribosyltransferase; Provisional
Probab=99.93 E-value=1.9e-25 Score=200.64 Aligned_cols=150 Identities=20% Similarity=0.294 Sum_probs=135.2
Q ss_pred CCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCCh
Q 028541 23 PMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCED 102 (207)
Q Consensus 23 ~i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~ 102 (207)
.|..+..||.|++....++-+.++ +..++++|+.|+. +.|++|+++++++|+.+.++
T Consensus 12 ~i~~g~~td~YF~~t~~il~~~~~-~~~~~~~~~~R~~-----~~VlaGleea~~ll~~l~~~----------------- 68 (352)
T PRK07188 12 RIGEGWYSAVYFLKTREIIEKFNP-NNIVTMQFFQRRE-----NAVLCGTDEVIALLKTFAKD----------------- 68 (352)
T ss_pred HHhcCchhHHHHHHHHHHHHHhCC-CCeEEEEEEEeCC-----CeEEecHHHHHHHHHHcCCC-----------------
Confidence 477889999999999999988888 7899999999952 24889999999999875432
Q ss_pred hHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccC
Q 028541 103 GFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGL 182 (207)
Q Consensus 103 ~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGt 182 (207)
..+++++++|||++++|+||+++|+||+.++.++|+.+|++|++.|.+||++++++.+++ +.++.+|||
T Consensus 69 ----------~~~~~i~a~~eG~~v~~gepvl~i~G~~~~l~~~Et~iLnlL~~~SgIAT~a~r~v~aA~-~~~~~~~gT 137 (352)
T PRK07188 69 ----------PSKLKIRYLKDGDIINPFETVLEIEGPYENFGFLEGIIDGILARRTSVATNAYNVVQAAN-EKPVIFMGD 137 (352)
T ss_pred ----------ccceEEEEcCCCCEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEec
Confidence 234789999999999999999999999999999999999999999999999999999997 789999999
Q ss_pred CCCCCcchHHHHHHHHhhcCccccC
Q 028541 183 RRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 183 Rr~~~~~~~~~~~raa~igG~~gtS 207 (207)
|+.| |..+....||+++||++++|
T Consensus 138 RKt~-p~~~~~~~~Aa~igG~~~~s 161 (352)
T PRK07188 138 RADH-YLQQAGDGYAAYIGGISAFS 161 (352)
T ss_pred CCCC-ccchhHhhHHhhcCCcHHHH
Confidence 9998 56788889999999999876
No 16
>PRK08662 nicotinate phosphoribosyltransferase; Reviewed
Probab=99.92 E-value=1.4e-24 Score=194.85 Aligned_cols=151 Identities=32% Similarity=0.495 Sum_probs=137.5
Q ss_pred CCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCC
Q 028541 21 TNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSC 100 (207)
Q Consensus 21 ~~~i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f 100 (207)
+++|...++||.|+.+|.+++|++++ +..++++++.|+.| ++++.|++|++++.+.++.+
T Consensus 9 ~~~~~~~l~~D~Y~~~t~~~l~~~g~-~~~~~~~i~~R~~p-~~~~~i~aG~~~a~~~~~~~------------------ 68 (343)
T PRK08662 9 EEEIKSGKTTDIYFERTVEILEHAGK-NPKVVAEVTASSLP-KGEWGVFAGLEEVLELLEGK------------------ 68 (343)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHcCC-CCeEEEEEEEecCC-CCCCEEEccHHHHHHHHhhC------------------
Confidence 34466678899999999999999999 89999999999998 78888999999999988752
Q ss_pred ChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeec
Q 028541 101 EDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEF 180 (207)
Q Consensus 101 ~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dF 180 (207)
.++|++++||+.++|++|+++|+||+..+.++|+++|++|++.|.+||++++++.+++ +.++..|
T Consensus 69 --------------~~~v~~~~dG~~v~~g~~il~i~G~~~~ll~~Er~~Ln~L~~~SgIAT~t~~~v~aa~-~~~v~~~ 133 (343)
T PRK08662 69 --------------PVDVYALPEGTLFDPKEPVMRIEGPYLEFGIYETALLGILAHASGIATAAARCKEAAG-DKPVLSF 133 (343)
T ss_pred --------------CcEEEEeCCCCEecCCceEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEe
Confidence 2567899999999999999999999999999999999999999999999999999986 7999999
Q ss_pred cCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 181 GLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 181 GtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
|||+++ |.......||+++||+++||
T Consensus 134 ~TRKt~-Pg~r~l~k~Av~~GGg~~hs 159 (343)
T PRK08662 134 GARHVH-PAIAPMMDRAAYIGGCDGVS 159 (343)
T ss_pred ccCCCC-HhHHHHHHhhhccccccccc
Confidence 999998 66777899999999998875
No 17
>cd00516 PRTase_typeII Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate phosphoribosyltransferase (NAPRTase), to be used in the synthesis of NAD. QAPRTase catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide, an important step in the de novo synthesis of NAD. NAPRTase catalyses a similar reaction leading to NAMN and pyrophosphate, using nicotinic acid an PPRP as substrates, used in the NAD salvage pathway.
Probab=99.91 E-value=1.2e-23 Score=183.20 Aligned_cols=141 Identities=33% Similarity=0.487 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhc
Q 028541 31 DLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRG 110 (207)
Q Consensus 31 D~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~ 110 (207)
|+||++|.++ +..+ +..++|+|++|+.| +.|++|+++++++++.+.|
T Consensus 1 D~y~~~~~~~--~~~~-~~~~~~~~~~R~~~----~~v~~Gl~~~~~~l~~l~~-------------------------- 47 (281)
T cd00516 1 DLYKLTMIQA--YPPP-DTRATAEFTAREDP----YGVLAGLEEALELLELLRF-------------------------- 47 (281)
T ss_pred ChhHHHHHhh--hCCC-CCEEEEEEEEecCC----CEEEcCHHHHHHHHHhcCC--------------------------
Confidence 8999999998 4555 78999999999875 5588999999999997643
Q ss_pred CCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CCcEeeccCCCCCCcc
Q 028541 111 INCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK-SKMLLEFGLRRAQGPD 189 (207)
Q Consensus 111 ~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~-~~~~~dFGtRr~~~~~ 189 (207)
+....+++++||+.+++++|+++|+|||.++.++|+++|+++++.|.+||++.+++.++++ ++++.+||||++++ .
T Consensus 48 --~~~~~~~~~~eG~~v~~g~~vl~i~G~~~~~~~~E~~~Lnil~~~sgiAt~t~~~v~~~~~~~~~~~~~gtRk~~p-~ 124 (281)
T cd00516 48 --PGPLVILAVPEGTVVEPGEPLLTIEGPARELLLLERVLLNLLQRLSGIATATARYVEAAKGANTKVHDFGTRKTTP-G 124 (281)
T ss_pred --CCceEEEECCCCCEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEeecCCCCc-c
Confidence 1246888899999999999999999999999999999999999999999999999988862 28999999999996 8
Q ss_pred hHHHHHHHHhhcCccccC
Q 028541 190 GGIGASKYCYIGGFDATR 207 (207)
Q Consensus 190 ~~~~~~raa~igG~~gtS 207 (207)
......+|.++||+.++|
T Consensus 125 ~~~~~~~A~~~gG~~~hr 142 (281)
T cd00516 125 LRLLEKYAVLIGGGDGHR 142 (281)
T ss_pred hhHHhhHHHhhccccccc
Confidence 889999999999999886
No 18
>cd01571 NAPRTase_B Nicotinate phosphoribosyltransferase (NAPRTase), subgroup B. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products.
Probab=99.86 E-value=1.1e-20 Score=167.04 Aligned_cols=141 Identities=33% Similarity=0.543 Sum_probs=128.1
Q ss_pred hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHH
Q 028541 28 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDY 107 (207)
Q Consensus 28 LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~ 107 (207)
.+||.|+......+.++++ +..++++++.|.+| |.|++|++++++.++.+
T Consensus 2 ~~~~~yf~~t~~~~~~~~~-~~~~~~~i~~r~~~----~~v~aG~~~~~~~~~~~------------------------- 51 (302)
T cd01571 2 RFTDVYFLRTRKILEKKGP-NPTVTMEFTQRSLP----WAVLCGLEEVLALLEGL------------------------- 51 (302)
T ss_pred cchHHHHHHHHHHHHHhCC-CCeEEEEEEEEcCc----hHHHhhHHHHHHHHhCC-------------------------
Confidence 4699999999998877776 78999999999887 67999999999888742
Q ss_pred HhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCC
Q 028541 108 LRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQG 187 (207)
Q Consensus 108 L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~ 187 (207)
+++|++++||+.++|++|+++|+||...+...|+.+|++||+.|.+||++++++.+++ +.++..||||+.+
T Consensus 52 -------~~~i~~~~dG~~v~~g~~i~~i~G~~~~ll~~Er~~Ln~L~~~SgIAT~t~~~v~~~~-~~~~~i~~TRKt~- 122 (302)
T cd01571 52 -------PVKVYALPEGTIFNPKEPVLRIEGPYQDFGELETAILGILARASSIATNAARVKLAAG-DKPVISFGDRRDH- 122 (302)
T ss_pred -------CeEEEEeCCCCEECCCCcEEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcEEEeecccCC-
Confidence 4788889999999999999999999999999999999999999999999999999997 5889999999998
Q ss_pred cchHHHHHHHHhhcCccccC
Q 028541 188 PDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 188 ~~~~~~~~raa~igG~~gtS 207 (207)
|.......||+++||++++|
T Consensus 123 Pg~r~~~k~Av~~GGg~~hr 142 (302)
T cd01571 123 PAIQPMDGRAAYIGGCDGVS 142 (302)
T ss_pred cchhHHHHHHHHhcCcccee
Confidence 56777889999999999875
No 19
>cd01568 QPRTase_NadC Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.
Probab=99.45 E-value=1.4e-12 Score=113.74 Aligned_cols=122 Identities=24% Similarity=0.226 Sum_probs=106.2
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
+.+..++.+++.|.. .|++|++++.+.++.+ + .++| +.++||
T Consensus 24 ~~~~~~~~~i~~r~~------~v~~G~~~~~~i~~~~-----------------------------~--~~~v~~~~~dG 66 (269)
T cd01568 24 PGDAPATATLIAKEE------GVLAGLEVAEEVFELL-----------------------------D--GIEVEWLVKDG 66 (269)
T ss_pred CCCceEEEEEEecCC------EEEECHHHHHHHHHHh-----------------------------C--CeEEEEEeCCC
Confidence 446789999999964 2889999988887742 1 3566 678999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.|++|+++|+|+.......|..+|++|.+.|.+||++++++.+++ +.++.-|+||+.+ |-.....-||..+||..
T Consensus 67 ~~v~~g~~i~~i~G~~~~l~~~Er~~ln~L~~~sgIAT~t~~~v~~a~-~~~~~i~~TRKt~-Pg~r~~~k~Av~~GGg~ 144 (269)
T cd01568 67 DRVEAGQVLLEVEGPARSLLTAERVALNLLQRLSGIATATRRYVEAAR-GTKARIADTRKTT-PGLRLLEKYAVRAGGGD 144 (269)
T ss_pred CEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEeecCCCC-hhhHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999999999999997 5889999999988 67888899999999986
Q ss_pred cc
Q 028541 205 AT 206 (207)
Q Consensus 205 gt 206 (207)
..
T Consensus 145 ~h 146 (269)
T cd01568 145 NH 146 (269)
T ss_pred cc
Confidence 53
No 20
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport. In general, QPRTases are part of the de novo synthesis pathway of NAD in both prokaryotes and eukaryotes. They catalyse the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide.
Probab=99.32 E-value=2.1e-11 Score=106.55 Aligned_cols=121 Identities=26% Similarity=0.250 Sum_probs=102.2
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEE-EeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVH-AITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~-a~~EG 124 (207)
+.+..++..++.|.. .|++|++++.+.++.+ +++|. +++||
T Consensus 24 ~~~~~~~~~~~ak~~------gv~aG~~~~~~~~~~~--------------------------------~~~v~~~~~dG 65 (272)
T cd01573 24 IGEQPGKITFRARDP------GVLCGTEEAARILELL--------------------------------GLEVDLAAASG 65 (272)
T ss_pred CCCCeEEEEEEECCC------EEEECHHHHHHHHHHc--------------------------------CcEEEEEcCCC
Confidence 445678888888864 2889999988877742 25553 68999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhC-CCCcEeeccCCCCCCcchHHHHHHHHhhcCc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG-KSKMLLEFGLRRAQGPDGGIGASKYCYIGGF 203 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~-~~~~~~dFGtRr~~~~~~~~~~~raa~igG~ 203 (207)
+.++|++|+++|+||.......|..+|+++.+.|.+||++++++.+++ .+..+.-++||+.+ |......-||.++||.
T Consensus 66 ~~v~~g~~i~~i~G~~~~ll~~Er~~ln~l~~~SGIAT~t~~~v~~~~~~~~~~~i~~TRKt~-Pg~r~~~k~Av~~GGg 144 (272)
T cd01573 66 SRVAAGAVLLEAEGPAAALHLGWKVAQTLLEWASGIATATAEMVAAARAVNPDIVVATTRKAF-PGTRKLALKAILAGGA 144 (272)
T ss_pred CEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCC-ccchHHHHHHHHhcCc
Confidence 999999999999999999999999999999999999999999998884 23456666799988 8888999999999998
Q ss_pred cc
Q 028541 204 DA 205 (207)
Q Consensus 204 ~g 205 (207)
+.
T Consensus 145 ~~ 146 (272)
T cd01573 145 VP 146 (272)
T ss_pred cc
Confidence 75
No 21
>TIGR00078 nadC nicotinate-nucleotide pyrophosphorylase. Synonym: quinolinate phosphoribosyltransferase (decarboxylating)
Probab=99.27 E-value=8.8e-11 Score=102.38 Aligned_cols=121 Identities=21% Similarity=0.245 Sum_probs=104.7
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
+.+..++.+|+.|.+ .|++|++++.+.++.+ +++| +.++||
T Consensus 22 ~~~~~~~~~~~ar~~------~v~~G~~~~~~i~~~~--------------------------------~~~v~~~~~dG 63 (265)
T TIGR00078 22 PGSTRATASLVAKED------GVLAGLPVARRVFEQL--------------------------------GVQVEWLVKDG 63 (265)
T ss_pred CCCceEEEEEEecCC------EEEECHHHHHHHHHHc--------------------------------CeEEEEEeCCC
Confidence 446778999999964 3889999999888752 1554 578999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.+++|+++|+|+.......|..+|++|.+.|.+||.+++++.+++ +..+.=++||..+ |-.....-||.++||..
T Consensus 64 ~~v~~g~~i~~i~G~~~~il~~Er~~ln~l~~~SGIAT~t~~~v~~~~-~~~~~i~~TRKt~-Pg~r~l~k~Av~~GGg~ 141 (265)
T TIGR00078 64 DRVEPGEVVAEVEGPARSLLTAERTALNFLGRLSGIATATRKYVEAAR-GTNVRIADTRKTT-PGLRLLEKYAVRVGGGD 141 (265)
T ss_pred CEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCC-hhhhHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999986 5668888999987 77888889999999987
Q ss_pred cc
Q 028541 205 AT 206 (207)
Q Consensus 205 gt 206 (207)
..
T Consensus 142 ~H 143 (265)
T TIGR00078 142 NH 143 (265)
T ss_pred cc
Confidence 53
No 22
>cd01572 QPRTase Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.
Probab=99.26 E-value=1.1e-10 Score=101.93 Aligned_cols=122 Identities=22% Similarity=0.222 Sum_probs=105.7
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
+.+..++.+|+.|.+- |++|++++.+.++.+. .+++| +..+||
T Consensus 24 ~~~~~~~~~~~ar~~~------v~~G~~~~~~i~~~~~------------------------------~~l~v~~~~~dG 67 (268)
T cd01572 24 PPDARAEARLIAKEEG------VLAGLPVAEEVFELLD------------------------------PGIEVEWLVKDG 67 (268)
T ss_pred CCCCeEEEEEEEcCCE------EEECHHHHHHHHHHcC------------------------------CCeEEEEEeCCC
Confidence 4467899999999642 7899999998887520 13566 567999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.+++|+++|+|+.......|..+|++|.+.|.+||++++++.+++ +.++.=++||..+ |-.....-||..+||..
T Consensus 68 ~~v~~g~~i~~i~G~~~~ll~~Er~~ln~L~~~SGIAT~t~~~v~~a~-~~~~~i~~TRKt~-Pg~r~~~k~Av~~GGg~ 145 (268)
T cd01572 68 DRVEPGQVLATVEGPARSLLTAERTALNFLQRLSGIATLTRRYVEALA-GTKARILDTRKTT-PGLRLLEKYAVRCGGGD 145 (268)
T ss_pred CEecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCCC-hhhHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999999999999997 5789999999987 66778889999999986
Q ss_pred c
Q 028541 205 A 205 (207)
Q Consensus 205 g 205 (207)
.
T Consensus 146 ~ 146 (268)
T cd01572 146 N 146 (268)
T ss_pred c
Confidence 4
No 23
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.98 E-value=8.3e-09 Score=90.40 Aligned_cols=118 Identities=18% Similarity=0.198 Sum_probs=100.5
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCeee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVV 127 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a~~EG~lv 127 (207)
+..++..++.|.. .|++|+.++.+.++.+ . ..++. .++||+.+
T Consensus 28 ~~~~~a~i~ar~~------~v~~G~~~a~~i~~~l--------------~----------------~~~~~-~~~dG~~v 70 (273)
T PRK05848 28 DFKATAKIIAKSE------GVFSGEKYALELLEMT--------------G----------------IECVF-TIKDGERF 70 (273)
T ss_pred CCeEEEEEEEcCC------EEEECHHHHHHHHHHc--------------C----------------CEEEE-EcCCCCEe
Confidence 5678888888864 2889999999887742 1 12333 57999999
Q ss_pred cCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 128 FPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 128 ~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
.+++|+++|+|+.......|..+|+++.+.|.+||.+++++.+++ +.++.=++||..+ |-.-...-||.++||..
T Consensus 71 ~~g~~i~~i~G~a~~ll~~Er~~ln~l~~~SGIAT~t~~~v~~~~-~~~~~i~~TRKt~-Pg~r~~~k~Av~~GGg~ 145 (273)
T PRK05848 71 KKGDILMEIEGDFSMLLKVERTLLNLLQHSSGIATLTSRYVEALE-SHKVKLLDTRKTR-PLLRIFEKYSVRNGGAS 145 (273)
T ss_pred cCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCC-cchhHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999999999986 5788899999977 77788888999999975
No 24
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.92 E-value=2.1e-08 Score=88.04 Aligned_cols=118 Identities=23% Similarity=0.281 Sum_probs=99.1
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEE-eeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHA-ITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a-~~EG~l 126 (207)
+..+...++.|..- |++|+.++.+.++.+ +++|.. ++||+.
T Consensus 28 ~~~~~~~~~ar~~g------i~aG~~~a~~i~~~l--------------------------------~~~v~~~~~dG~~ 69 (278)
T PRK08385 28 DVTARAVIIAKQDG------VIAGLEEAKALFEHF--------------------------------GVKVEVRKRDGEE 69 (278)
T ss_pred CCeEEEEEEecCCe------EEeCHHHHHHHHHHc--------------------------------CCEEEEEcCCCCE
Confidence 56788888888652 789999998887752 134433 699999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhC-CCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG-KSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 127 v~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~-~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.|++++++|+|+.......|-.+|+++.+.|.+||.+++++.++. .+.++.=++||..+ |-.-...-+|..+||..
T Consensus 70 v~~g~~i~~i~G~~~~ll~~Er~~ln~l~~~SGIAT~T~~~v~~~~~~~~~~~i~~TRKt~-Pg~R~l~k~Av~~GGg~ 147 (278)
T PRK08385 70 VKAGEVILELKGNARAILLVERTALNIIGRMSGIATETRKLVELVKAVNPKVRVAGTRKTL-PGLRLLDKKAIIIGGGE 147 (278)
T ss_pred ecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeCCCC-hhhhHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999988873 24667778999987 76777788888999875
No 25
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.90 E-value=2.6e-08 Score=87.89 Aligned_cols=123 Identities=21% Similarity=0.179 Sum_probs=99.0
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
+.+..+...++.|.. .|++|++++.+.++.+ +. ...++| +..+||
T Consensus 40 ~~~~~~~a~i~are~------gilaG~~~a~~if~~~-------------~~---------------~~~~~v~~~~~dG 85 (289)
T PRK07896 40 PADAVATASVVSREA------GVVAGLDVALLVLDEV-------------LG---------------TDGYEVLDRVEDG 85 (289)
T ss_pred CCCCeEEEEEEecCC------EEEECHHHHHHHHHHh-------------cC---------------CCceEEEEEcCCC
Confidence 335567778888853 2789999988877421 01 102455 457999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.|++|+++|+|+.......|..+|+++.+.|.+||.+++++.++. +.++.=++||..+ |-.-...-||..+||..
T Consensus 86 ~~v~~g~~i~~i~G~a~~ll~~ER~aLN~L~~~SGIAT~t~~~v~~~~-~~~~~i~~TRKT~-Pg~R~l~k~AV~~GGG~ 163 (289)
T PRK07896 86 ARVPPGQALLTVTAPTRGLLTAERTMLNLLCHLSGIATATAAWVDAVA-GTKAKIRDTRKTL-PGLRALQKYAVRCGGGV 163 (289)
T ss_pred CEecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCC-CcchHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999999999998885 5677778999987 66777788899999843
No 26
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.90 E-value=2.6e-08 Score=87.43 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=99.6
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCC-ceEEEEeeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCS-DVEVHAITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~-~v~I~a~~EG~l 126 (207)
+..+...++.|.. .|++|+.++.+.++.+ . .. .+++ ..+||+.
T Consensus 34 ~~~~~~~i~ar~~------gi~~G~~~~~~i~~~~--------------~---------------~~~~~~~-~~~dG~~ 77 (277)
T PRK05742 34 ERLAKATVITREA------AVIAGTAWVDAVFRQL--------------D---------------PRVAVHW-QVADGER 77 (277)
T ss_pred CcEEEEEEEECCC------EEEECHHHHHHHHHHc--------------C---------------CceEEEE-EeCCCCE
Confidence 5667788888864 2789999988877752 1 11 1333 4699999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcccc
Q 028541 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDAT 206 (207)
Q Consensus 127 v~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~gt 206 (207)
+.+++++++|+|+.......|..+|+++.+.|.+||.+++++.++. +..+.=++||..+ |-.-...-||..+||...+
T Consensus 78 v~~g~~i~~i~G~~~~ll~~ER~~ln~l~~~SGIAT~T~~~v~~~~-~~~~~i~~TRKt~-Pg~R~~~k~Av~~GGg~~H 155 (277)
T PRK05742 78 VSANQVLFHLEGPARSLLTGERSALNFLQLLSGVATRARHYADLVA-GTQVKLLDTRKTL-PGLRLAQKYAVTCGGCHNH 155 (277)
T ss_pred EcCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCC-CchhHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999998885 5667778999877 7777788899999998654
No 27
>PRK09016 quinolinate phosphoribosyltransferase; Validated
Probab=98.55 E-value=1.6e-06 Score=76.86 Aligned_cols=119 Identities=19% Similarity=0.227 Sum_probs=93.8
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG~l 126 (207)
+..+...++.|.. .|++|+..+-+.++.+ + + +++| +..+||+.
T Consensus 53 ~~~~~~~i~ake~------gi~aG~~~a~~vf~~l--------------~---------------~-~~~v~~~~~dG~~ 96 (296)
T PRK09016 53 DSRSHATIITRED------GVFCGKRWVEEVFIQL--------------G---------------D-DVTIEWHVDDGDV 96 (296)
T ss_pred CCEEEEEEEEcCC------EEEECHHHHHHHHHHc--------------C---------------C-CeEEEEEcCCCCE
Confidence 4567777777753 2789998877766642 1 1 2444 45799999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 127 v~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+++++++++|+.......|-.+|+++.+.|.+||..++++.++. +.++.=.+||..+ |-.-...-+|..+||..
T Consensus 97 v~~G~~i~~i~G~a~~ll~~ER~~LN~L~~~SGIAT~T~~~v~~~~-~~~~~i~~TRKT~-Pg~R~l~k~AV~~GGG~ 172 (296)
T PRK09016 97 ITANQTLFELTGPARVLLTGERTALNFVQTLSGVATEVRRYVELLA-GTNTQLLDTRKTL-PGLRSALKYAVLCGGGA 172 (296)
T ss_pred ecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCC-CchhHHHHHHHHhcCcc
Confidence 9999999999999999999999999999999999999999988885 5555567799876 66666677888888843
No 28
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.49 E-value=2.4e-06 Score=75.43 Aligned_cols=118 Identities=16% Similarity=0.118 Sum_probs=95.7
Q ss_pred ceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCeee
Q 028541 49 ERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSVV 127 (207)
Q Consensus 49 ~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG~lv 127 (207)
..+...++.|.. .|++|+..+-+.++.+. . .+++ +..+||+.+
T Consensus 41 ~~~~~~i~ar~~------gv~~G~~~a~~i~~~~~-----------------------------~-~~~~~~~~~dG~~v 84 (288)
T PRK07428 41 TTGQAKWIAKES------GVIAGLPIAARVFQLLD-----------------------------P-QVSFTPLVAEGAAC 84 (288)
T ss_pred cEEEEEEEecCC------eEEECHHHHHHHHHHcC-----------------------------C-cEEEEEEcCCCCEe
Confidence 567888888864 27899998887776421 1 2442 236999999
Q ss_pred cCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 128 FPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 128 ~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
.+++++++++|+.......|-.+|+++.+.|.+||..++++.++. +.++.=.+||... |-.-...-||..+||..
T Consensus 85 ~~g~~i~~~~G~a~~ll~~eR~~lN~l~~~SGIAT~T~~~v~~~~-~~~~~i~~TRKt~-Pg~R~l~k~AV~~GGg~ 159 (288)
T PRK07428 85 ESGQVVAEIEGPLDALLMGERVALNLAMRLSGIATLTRQYVEKIA-DLPTQLVDTRKTT-PGLRLLEKYATQVGGAI 159 (288)
T ss_pred cCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCC-CcchHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999998885 5567777999876 66667777888888864
No 29
>PRK08072 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.41 E-value=6.4e-06 Score=72.43 Aligned_cols=119 Identities=18% Similarity=0.104 Sum_probs=92.7
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEE-eeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHA-ITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a-~~EG~l 126 (207)
+..+...++.|.+- |++|+..+-+.++.+ . . +++|.. .+||+.
T Consensus 32 ~~~~~~~~~ar~~g------v~~G~~~a~~i~~~~--------------~---------------~-~~~v~~~~~dG~~ 75 (277)
T PRK08072 32 NLLGEGVFLAKDTG------VFAGRLVIEEGYKLL--------------D---------------E-RIEVELHKKDGDL 75 (277)
T ss_pred CCeEEEEEEecCCE------EEECHHHHHHHHHHc--------------C---------------C-ceEEEEEeCCCCE
Confidence 33677788888642 789998877766532 1 1 234333 499999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 127 v~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+++++++|+|+.......|-.+|+++.+.|.+||.+++++.++. +..+-=.+||... |-.-...-+|...||-.
T Consensus 76 v~~g~~i~~~~G~~~~ll~~er~~ln~l~~~sGIAT~t~~~v~~~~-~~~~~i~~TRKt~-Pg~R~~~k~Av~~GGg~ 151 (277)
T PRK08072 76 VKKGEIIATVQGPVASLLTGERVILNLIQRMSGIATMTRKAVLALD-DSHIRICDTRKTT-PGLRMFDKYAVVCGGGF 151 (277)
T ss_pred EcCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCC-cchhHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999998885 5667788999876 55555566666677743
No 30
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.40 E-value=6.5e-06 Score=72.50 Aligned_cols=121 Identities=19% Similarity=0.147 Sum_probs=96.0
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCC-CceEEEEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINC-SDVEVHAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~-~~v~I~a~~EG 124 (207)
|.+..+...++.|.+- |++|++.+-..++.+ . . ..++.. .+||
T Consensus 36 ~~~~~~~~~i~ake~g------v~aG~~~a~~vf~~~--------------~---------------~~~~~~~~-~~dG 79 (281)
T PRK06106 36 PADHRATVVLVARQPG------VIAGLDLARLAFRLV--------------D---------------PEIEMRRH-LPDG 79 (281)
T ss_pred CCCCeEEEEEEecCCe------EEECHHHHHHHHHHh--------------C---------------CceEEEEE-eCCC
Confidence 3456677888888642 779999877666532 1 1 124443 5999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.+++++++++|+.......|-.+|+++.+.|.+||..+++..+++ +.++-=.+||... |-.-...-+|..+||..
T Consensus 80 ~~v~~g~~i~~i~G~a~~ll~~ER~~LN~L~~~SGIAT~T~~~V~~~~-~~~~~i~~TRKT~-PG~R~l~k~AV~~GGG~ 157 (281)
T PRK06106 80 AAVAPGDVIATISGPARGLLTAERTALNFLCHLSGIATATASIVAAIA-GTKAKVVCTRKTT-PGLRALEKYAVRAGGGM 157 (281)
T ss_pred CEEcCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEeCCCC-CchhHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999998886 5678888999876 65666677788888843
No 31
>PLN02716 nicotinate-nucleotide diphosphorylase (carboxylating)
Probab=98.31 E-value=1.4e-05 Score=71.11 Aligned_cols=120 Identities=20% Similarity=0.231 Sum_probs=93.0
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCe
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGS 125 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a~~EG~ 125 (207)
+.+..+...++.|.. + |++|+..+-+.++.+- + ...++. ..+||+
T Consensus 44 ~~~~~~~a~i~ake~----g--vlaG~~~a~~vf~~l~-------------~---------------~~~v~~-~~~dG~ 88 (308)
T PLN02716 44 PGDMEAEATFLAKAD----G--VLAGIALADMVFEEVD-------------P---------------SLKVEW-AAIDGD 88 (308)
T ss_pred CCCCeEEEEEEeCCC----E--EEECHHHHHHHHHHcC-------------C---------------CeEEEE-EeCCCC
Confidence 335567888888864 2 7899998887776421 0 013443 479999
Q ss_pred eecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 126 VVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 126 lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
.+.+++++++|+||.......|-.+|+++.+.|.+||..++++.+++ +..+. +||... |-.-...-+|..+||..
T Consensus 89 ~v~~G~~i~~v~G~a~~il~~ER~aLN~L~~~SGIAT~T~~~V~~~~-~~~I~--~TRKT~-PGlR~l~k~AV~~GGg~ 163 (308)
T PLN02716 89 FVHKGLKFGKVTGPAHSILVAERVVLNFMQRMSGIATLTKAMADAAK-PACIL--ETRKTA-PGLRLVDKWAVLIGGGK 163 (308)
T ss_pred EecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cCEEe--eecCCC-CcchHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999998886 44444 499976 55555666777788754
No 32
>PRK06559 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.14 E-value=4.6e-05 Score=67.43 Aligned_cols=121 Identities=18% Similarity=0.216 Sum_probs=91.2
Q ss_pred CCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCC-ceEEEE-eeCC
Q 028541 47 HDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCS-DVEVHA-ITEG 124 (207)
Q Consensus 47 ~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~-~v~I~a-~~EG 124 (207)
.+..+...++.|.+- |++|++.+-+.++.+ . .. .+.+.. .+||
T Consensus 38 ~~~~~~~~~~are~g------vlaG~~~a~~if~~l--------------~---------------~~~~~~~~~~~~dG 82 (290)
T PRK06559 38 HHGQAKVSLFAKEAG------VLAGLTVFQRVFTLF--------------D---------------AEVTFQNPHQFKDG 82 (290)
T ss_pred CCCeEEEEEEecCCe------EEECHHHHHHHHHHh--------------C---------------CcEEEEEeecCCCC
Confidence 355677777777642 789999887776642 1 11 123332 4999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.+++++++++|+.......|-..|+++.+.|.+||..+++..++. +..+-=.+||-.. |-.-...-+|...||..
T Consensus 83 ~~v~~G~~i~~v~G~a~~ll~~ER~alN~l~~~SGIAT~T~~~V~~~~-~~~~~i~~TRKT~-PG~R~l~k~AV~~GGG~ 160 (290)
T PRK06559 83 DRLTSGDLVLEIIGSVRSLLTCERVALNFLQHLSGIASMTAAYVEALG-DDRIKVFDTRKTT-PNLRLFEKYAVRVGGGY 160 (290)
T ss_pred CEecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeecCCC-CcchHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999988875 4444444898876 55555666777788754
No 33
>TIGR01334 modD putative molybdenum utilization protein ModD. The gene modD for a member of this family is found with molybdenum transport genes modABC in Rhodobacter capsulatus. However, disruption of modD causes only a 4-fold (rather than 500-fold for modA, modB, modC) change in the external molybdenum concentration required to suppress an alternative nitrogenase. ModD proteins are highly similar to nicotinate-nucleotide pyrophosphorylase (also called quinolinate phosphoribosyltransferase). The function unknown.
Probab=97.91 E-value=0.00027 Score=62.27 Aligned_cols=118 Identities=17% Similarity=0.190 Sum_probs=89.7
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCe
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGS 125 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a~~EG~ 125 (207)
|.+..++..++.|.+- |++|+..+-+.++.+. ..+++. .+||+
T Consensus 28 ~~~~~~~~~~~are~g------v~~G~~~~~~i~~~l~------------------------------~~~~~~-~~dG~ 70 (277)
T TIGR01334 28 IQDHPAHITFTARDEG------IVSGVSEAAKLLKQLG------------------------------ASIDYA-VPSGS 70 (277)
T ss_pred CCCceEEEEEEEcCCE------EEECHHHHHHHHHHcC------------------------------CEEEEE-eCCCC
Confidence 4466788888888642 7799999887776421 135554 69999
Q ss_pred eecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhC---CCCcEeeccCCCCCCcchHHHHHHHHhhcC
Q 028541 126 VVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG---KSKMLLEFGLRRAQGPDGGIGASKYCYIGG 202 (207)
Q Consensus 126 lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~---~~~~~~dFGtRr~~~~~~~~~~~raa~igG 202 (207)
.+.+++++++++|+......-|=..|+++.+.|.+||..+++..++. .+.++.+ ||-.. |-.-.-.-+|...||
T Consensus 71 ~v~~g~~i~~~~G~a~~ll~~eR~alN~l~~~SGIAT~T~~~V~~~~~~~~~~~I~~--TRKT~-Pg~R~l~k~Av~~GG 147 (277)
T TIGR01334 71 RALAGTLLLEAKGSAGQLHQGWKSAQSVLEWSCGVATYTHKMVTLAKKISPMAVVAC--TRKAI-PLTRPLAVKAVLAAG 147 (277)
T ss_pred EeCCCCEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEe--cCCCC-CChhHHHHHHHHhCC
Confidence 99999999999999999988899999999999999999999887764 2456666 88865 434444445555566
Q ss_pred c
Q 028541 203 F 203 (207)
Q Consensus 203 ~ 203 (207)
-
T Consensus 148 g 148 (277)
T TIGR01334 148 G 148 (277)
T ss_pred C
Confidence 4
No 34
>PRK06543 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.86 E-value=0.00036 Score=61.56 Aligned_cols=120 Identities=18% Similarity=0.135 Sum_probs=90.1
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCC-ceEEEEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCS-DVEVHAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~-~v~I~a~~EG 124 (207)
+.+..+...++.|.+- |++|+..+.+.++.+ . +. .++.. .+||
T Consensus 31 ~~~~~~~a~i~are~g------vlaG~~~a~~if~~~--------------~---------------~~~~v~~~-~~dG 74 (281)
T PRK06543 31 PASATASAHLTAREPG------VFSGIDVFAAAFRLV--------------D---------------PAITVTLA-VADG 74 (281)
T ss_pred CCCCeEEEEEEecCCe------EEECHHHHHHHHHHh--------------C---------------CCeEEEEE-eCCC
Confidence 4456788888888642 789999988877642 1 11 24443 5999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CCcEeeccCCCCCCcchHHHHHHHHhhcCc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK-SKMLLEFGLRRAQGPDGGIGASKYCYIGGF 203 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~-~~~~~dFGtRr~~~~~~~~~~~raa~igG~ 203 (207)
+.+.+++++++++|+......-|=..|+++.+.|.+||..+++..++.+ +.++. +||-.. |-.-.-.-+|..+||.
T Consensus 75 ~~v~~G~~i~~~~G~a~~ll~~eR~alN~l~~~SGIAT~T~~~V~~~~~~~~~i~--~TRKT~-PG~R~l~k~AV~~GGg 151 (281)
T PRK06543 75 ERFEAGDILATVTGPARSVLTAERIALNFTQRMSGIATLTAAFVDAVNGTRARIV--DTRKTT-PGLRIFERYAVRCGGG 151 (281)
T ss_pred CEecCCCEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEE--eCCCCC-CcchHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999998877752 34444 677765 4444445566667775
Q ss_pred c
Q 028541 204 D 204 (207)
Q Consensus 204 ~ 204 (207)
.
T Consensus 152 ~ 152 (281)
T PRK06543 152 H 152 (281)
T ss_pred c
Confidence 4
No 35
>PRK06096 molybdenum transport protein ModD; Provisional
Probab=97.73 E-value=0.00053 Score=60.61 Aligned_cols=121 Identities=12% Similarity=0.135 Sum_probs=89.1
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCe
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGS 125 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a~~EG~ 125 (207)
+.+..++..++.|.+- |++|+..+-+.++.+. ..+++. .+||+
T Consensus 29 ~~~~~~~~~~~ake~g------v~aG~~~a~~if~~l~------------------------------~~v~~~-~~dG~ 71 (284)
T PRK06096 29 IGHQPGYIEFFHRQGG------CVSGISVACKMLTTLG------------------------------LTIDDA-VSDGS 71 (284)
T ss_pred CCCceEEEEEEEcCCE------EEECHHHHHHHHHHcC------------------------------CEEEEE-eCCCC
Confidence 4466788888888642 7799998877776421 135554 69999
Q ss_pred eecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 126 VVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK-SKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 126 lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~-~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
.+.+++++++++|+......-|=..|+++.+.|.+||..+++..+++. +.++-=-.||-.. |-.-.-.-+|..+||..
T Consensus 72 ~v~~G~~i~~~~G~a~~ll~~eR~alN~l~~~SGIAT~T~~~V~~~~~~~~~~~I~~TRKT~-Pg~R~l~k~AV~~GGg~ 150 (284)
T PRK06096 72 QANAGQRLISAQGNAAALHQGWKAVQNVLEWSCGVSDYLAQMLALLRERYPDGNIACTRKAI-PGTRLLATQAVLAAGGL 150 (284)
T ss_pred EeCCCCEEEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEecCcCC-CchhHHHHHHHHcCCCc
Confidence 999999999999999999999999999999999999999998776631 2233334567765 44444455566667643
No 36
>PRK06978 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.67 E-value=0.0011 Score=58.79 Aligned_cols=119 Identities=15% Similarity=0.155 Sum_probs=89.7
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCC-CceEEEEeeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINC-SDVEVHAITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~-~~v~I~a~~EG~l 126 (207)
+..+...++.|.+- |++|+..+-+.++.+ . . ..+++. .+||+.
T Consensus 50 ~~~~~a~i~are~g------vlaG~~~a~~if~~l--------------~---------------~~~~v~~~-~~dG~~ 93 (294)
T PRK06978 50 GEPRRARVIVREEA------VLCGVPWFDAVMRAV--------------D---------------PSIEVTWR-YREGDR 93 (294)
T ss_pred CceEEEEEEEcCCE------EEECHHHHHHHHHHh--------------C---------------CCeEEEEE-cCCCCE
Confidence 56778888888642 789999887777642 1 1 134443 599999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 127 v~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+++++++++|+......-|=..|+++.+.|.+||..+++...+. +..+-=-+||-.. |-.-.-.-+|..+||..
T Consensus 94 v~~G~~i~~~~G~a~~lL~~ER~aLN~l~~~SGIAT~T~~~V~~~~-~~~~~I~dTRKT~-PGlR~lekyAV~~GGG~ 169 (294)
T PRK06978 94 MTADSTVCELEGPARALLTAERNALNFLQLLSGVASATRRYVDRIA-GTRARILDTRKTL-PGLRLAQKYAVRVGGGE 169 (294)
T ss_pred eCCCCEEEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEecCCCC-CchhHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999887774 4444445688876 54444455666677753
No 37
>PF02749 QRPTase_N: Quinolinate phosphoribosyl transferase, N-terminal domain; InterPro: IPR022412 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0016763 transferase activity, transferring pentosyl groups; PDB: 3L0G_B 1QAP_A 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 2I14_C 1X1O_B 2B7Q_B ....
Probab=97.66 E-value=0.00028 Score=51.52 Aligned_cols=75 Identities=25% Similarity=0.419 Sum_probs=59.7
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEE-EeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVH-AITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~-a~~EG 124 (207)
+.+..++..++.|.+- |++|++.+-+.++.+ +++|. ..+||
T Consensus 13 ~~~~~~~a~i~are~g------V~aG~~~~~~i~~~l--------------------------------~~~v~~~~~dG 54 (88)
T PF02749_consen 13 PPDKTGTATIIAREDG------VLAGLEEAEEIFEKL--------------------------------GLEVEWLVKDG 54 (88)
T ss_dssp CTTSEEEEEEEESSSE------EE-SHHHHHHHHHHC--------------------------------TEEEEESS-TT
T ss_pred CCCCEEEEEEEeCCCE------EEECHHHHHHHHhhc--------------------------------cEEEEEEeCCC
Confidence 4478899999999752 779999988877752 23443 35999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHH
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYAS 158 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~ 158 (207)
+.+.+++++++|+||.......|-.+|+++.+.|
T Consensus 55 ~~v~~g~~i~~i~G~a~~ll~~ER~~LN~l~~~S 88 (88)
T PF02749_consen 55 DRVEPGDVILEIEGPARALLTAERTALNFLQRLS 88 (88)
T ss_dssp -EEETTCEEEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCcEEEEEEeCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999998865
No 38
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=97.30 E-value=0.0063 Score=53.53 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=88.9
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
|.+..++-.++.|.. + |++|+..+...++.+- + .+++ +.++||
T Consensus 30 ~~~~~a~a~i~ake~----G--vvaG~~~a~~~f~~l~-----------------------------~-~i~~~~~~~DG 73 (280)
T COG0157 30 PEDRKAEAVIIAKEA----G--VVAGLDVAEEVFELLG-----------------------------P-SIEIQWLVKDG 73 (280)
T ss_pred CCCCeEEEEEEEcCC----c--EEEcHHHHHHHHHHhC-----------------------------C-ceEEEEEcCCC
Confidence 445667888788864 3 7899998887777421 1 1333 346999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.|++.+++++||-.....-|=..|+++...|.+||..+++..+++ +..+-=-.||-.. |---.---+|-.+||.+
T Consensus 74 ~~v~~g~~i~~~~G~a~~lL~~ER~aLN~L~~lSGIAT~T~~~V~~~~-~~~~~i~~TRKT~-PglR~leKyAV~~GGG~ 151 (280)
T COG0157 74 DRVKPGDVLAEIEGPARALLTAERTALNFLQHLSGIATATARMVEALR-GTNVRIADTRKTT-PGLRLLEKYAVRAGGGD 151 (280)
T ss_pred CEeCCCCEEEEEeccHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh-ccCcEEEeccCCC-ccHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999887775 4445556788765 32222333445566654
No 39
>KOG3008 consensus Quinolinate phosphoribosyl transferase [Nucleotide transport and metabolism]
Probab=95.11 E-value=0.059 Score=46.40 Aligned_cols=86 Identities=23% Similarity=0.222 Sum_probs=67.1
Q ss_pred EEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhC-CCCcEeeccCCCCCCcchHHHHHHH
Q 028541 119 HAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG-KSKMLLEFGLRRAQGPDGGIGASKY 197 (207)
Q Consensus 119 ~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~-~~~~~~dFGtRr~~~~~~~~~~~ra 197 (207)
|..+||+.+.|.--+-.|+||-....+-|-.+|+++++.|.+||.+..+..+|. .|-+-.=-|||... |---...-++
T Consensus 75 W~~KeGs~l~p~~~vaKv~GpAh~IllAERvaLN~l~R~SGIATa~~~~~~aAr~~g~~g~IagTRKTt-PGLRlveKy~ 153 (300)
T KOG3008|consen 75 WFLKEGSKLVPVARVAKVRGPAHCILLAERVALNTLARCSGIATAAAAAVEAARGAGWTGHIAGTRKTT-PGLRLVEKYG 153 (300)
T ss_pred EEecCCCeecccceeEeecCcceeeeehHHHHHHHHHHhccHHHHHHHHHHHHhcCCCcceecccccCC-cchhhhhhhc
Confidence 356999999898889999999999999999999999999999999888877774 23344456777754 3233334466
Q ss_pred HhhcCccc
Q 028541 198 CYIGGFDA 205 (207)
Q Consensus 198 a~igG~~g 205 (207)
-+|||++.
T Consensus 154 ~LvGG~~~ 161 (300)
T KOG3008|consen 154 LLVGGAAS 161 (300)
T ss_pred eeeccccc
Confidence 77898875
No 40
>KOG1159 consensus NADP-dependent flavoprotein reductase [Energy production and conversion]
Probab=42.26 E-value=66 Score=31.03 Aligned_cols=64 Identities=30% Similarity=0.588 Sum_probs=41.5
Q ss_pred HHHhcCCC-CceEEEEeeCCeeecCCc---cEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeecc
Q 028541 106 DYLRGINC-SDVEVHAITEGSVVFPKV---PLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFG 181 (207)
Q Consensus 106 ~~L~~~~~-~~v~I~a~~EG~lv~~~e---P~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFG 181 (207)
+||..+++ ..|.++ +.-|++.+|.. |+|-| ||=.-+ +|+.++|.+... .++...++.||
T Consensus 405 ~wl~sL~~g~~i~~~-v~~g~l~~p~~~~~PlImV-GPGTGv----APfRa~i~er~~-----------q~~~~~~lFfG 467 (574)
T KOG1159|consen 405 NWLASLKPGDEIPIK-VRPGTLYFPSDLNKPLIMV-GPGTGV----APFRALIQERIY-----------QGDKENVLFFG 467 (574)
T ss_pred HHHhhcCCCCeEEEE-EecCccccCCCCCCCeEEE-cCCCCc----ccHHHHHHHHHh-----------hccCCceEEEe
Confidence 56666665 457776 57899999988 88766 443222 566666655432 22224599999
Q ss_pred CCCCC
Q 028541 182 LRRAQ 186 (207)
Q Consensus 182 tRr~~ 186 (207)
.|-.+
T Consensus 468 CR~K~ 472 (574)
T KOG1159|consen 468 CRNKD 472 (574)
T ss_pred cccCC
Confidence 99765
No 41
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=40.34 E-value=15 Score=29.52 Aligned_cols=58 Identities=21% Similarity=0.202 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhCCCCceEEEEEEeecC----CCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHh
Q 028541 33 YQFTMAYAYWKAGKHDERAVFDLYFRKN----PFGGEYTIFAGLEECIRFIANFKLTEEEITFVRD 94 (207)
Q Consensus 33 Ykltm~~~~~~~~~~~~~v~f~~~~R~~----~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~ 94 (207)
-++.|.|++-++ . .+.+|+=|.+.. +.+.|+++.+.|+.++-.|.. ++|++|++.|-.
T Consensus 70 ~fLpm~q~vakn-k--~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGe-kl~eeEVe~Lla 131 (152)
T KOG0030|consen 70 EFLPMYQQVAKN-K--DQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGE-KLTEEEVEELLA 131 (152)
T ss_pred HHHHHHHHHHhc-c--ccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHh-hccHHHHHHHHc
Confidence 357787776655 3 467888777654 357889999999999999988 899999987764
No 42
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=36.96 E-value=93 Score=26.73 Aligned_cols=58 Identities=21% Similarity=0.385 Sum_probs=36.2
Q ss_pred CcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcC--CCCceEEEEeeCCe
Q 028541 64 GEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGI--NCSDVEVHAITEGS 125 (207)
Q Consensus 64 ~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~--~~~~v~I~a~~EG~ 125 (207)
++|. .-++.+++.|..-..|.+|+...-+.+| +.+.+.++|+.. ....+++..+.||.
T Consensus 40 ~~wt--~~m~~vl~~L~~~gvt~~~I~~~l~~ip--~~pgm~~~l~~l~~~~~~~~~~IiSDaN 99 (234)
T PF06888_consen 40 GGWT--EYMDRVLQLLHEQGVTPEDIRDALRSIP--IDPGMKELLRFLAKNQRGFDLIIISDAN 99 (234)
T ss_pred cchH--HHHHHHHHHHHHcCCCHHHHHHHHHcCC--CCccHHHHHHHHHhcCCCceEEEEeCCc
Confidence 4555 6678888888877789999865555544 676666665543 22234555555543
No 43
>PF08225 Antimicrobial19: Pseudin antimicrobial peptide; InterPro: IPR013156 Pseudins are a subfamily of the FSAP family (Frog Secreted Active Peptides) extracted from the skin of the paradoxical frog Pseudis paradoxa (Paradoxical frog). The pseudins belong to the class of cationic, amphipathic-helical antimicrobial peptides [].; GO: 0006952 defense response
Probab=33.06 E-value=49 Score=17.95 Aligned_cols=14 Identities=50% Similarity=0.968 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHhc
Q 028541 68 IFAGLEECIRFIAN 81 (207)
Q Consensus 68 v~~gl~~~i~~L~~ 81 (207)
|+.|++|+|+++.+
T Consensus 8 v~qglhe~ikli~n 21 (23)
T PF08225_consen 8 VFQGLHEVIKLINN 21 (23)
T ss_pred HHHHHHHHHHHHhc
Confidence 78999999998765
No 44
>PF03927 NapD: NapD protein; InterPro: IPR005623 This entry represents NapD, the twin-arginine signal-peptide-binding chaperone for NapA, functioning as an assembly protein for the periplasmic nitrate reductase NapABC. The periplasmic NapABC enzyme likely functions during growth in nitrate-limited environments [].; PDB: 2JSX_A 2PQ4_A.
Probab=29.83 E-value=1e+02 Score=21.82 Aligned_cols=22 Identities=36% Similarity=0.697 Sum_probs=18.2
Q ss_pred CceEEEEeeC-CeeecCCccEEEEEeccc
Q 028541 114 SDVEVHAITE-GSVVFPKVPLLRVEGPVA 141 (207)
Q Consensus 114 ~~v~I~a~~E-G~lv~~~eP~i~IeG~~~ 141 (207)
.+++|++..+ |++ +++||++-.
T Consensus 28 ~gvEVh~~~~~GKi------VVtiE~~~~ 50 (79)
T PF03927_consen 28 PGVEVHAVDEDGKI------VVTIEAESS 50 (79)
T ss_dssp TTEEEEEEETTTEE------EEEEEESSH
T ss_pred CCcEEEeeCCCCeE------EEEEEeCCh
Confidence 4689998866 999 699999865
No 45
>PF14568 SUKH_6: SMI1-KNR4 cell-wall; PDB: 2PRV_A.
Probab=26.70 E-value=51 Score=23.83 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=18.2
Q ss_pred HHHHHHHHhhCCCCCChhHHHHHhcCCC
Q 028541 86 EEEITFVRDSLPGSCEDGFFDYLRGINC 113 (207)
Q Consensus 86 ~eei~~L~~~~~~~f~~~fl~~L~~~~~ 113 (207)
+++|..+++.++--|+++|.+||+.++.
T Consensus 1 ee~I~~~E~~Lg~~lP~~Yk~fL~~~~g 28 (120)
T PF14568_consen 1 EEEIEEAEKKLGVKLPEDYKEFLKEYNG 28 (120)
T ss_dssp -HHHHHHHHHHTS---HHHHHHHHHC-S
T ss_pred ChHHHHHHHHhCCCCCHHHHHHHHHcCC
Confidence 3567777776654699999999998765
No 46
>PF13533 Biotin_lipoyl_2: Biotin-lipoyl like
Probab=24.97 E-value=92 Score=19.78 Aligned_cols=23 Identities=26% Similarity=0.241 Sum_probs=19.8
Q ss_pred EeeCCeeecCCccEEEEEeccch
Q 028541 120 AITEGSVVFPKVPLLRVEGPVAV 142 (207)
Q Consensus 120 a~~EG~lv~~~eP~i~IeG~~~~ 142 (207)
.+.||+.|..|+|++++..+-.+
T Consensus 17 ~V~~G~~VkkGd~L~~ld~~~~~ 39 (50)
T PF13533_consen 17 YVKEGQQVKKGDVLLVLDSPDLQ 39 (50)
T ss_pred EecCCCEEcCCCEEEEECcHHHH
Confidence 46899999999999999987654
No 47
>smart00860 SMI1_KNR4 SMI1 / KNR4 family. Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.
Probab=24.15 E-value=1e+02 Score=21.30 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=23.3
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhcCCC
Q 028541 84 LTEEEITFVRDSLPGSCEDGFFDYLRGINC 113 (207)
Q Consensus 84 ft~eei~~L~~~~~~~f~~~fl~~L~~~~~ 113 (207)
.|++||+.+++.++--|+++|.++|+.++.
T Consensus 2 ~s~~~i~~~e~~lg~~LP~~y~~f~~~~~g 31 (129)
T smart00860 2 ASEEEIAELEKKLGIKLPEDYKEFLLLHNG 31 (129)
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHcCC
Confidence 467788888876654699999999987655
No 48
>KOG3303 consensus Predicted alpha-helical protein, potentially involved in replication/repair [Replication, recombination and repair]
Probab=22.62 E-value=1e+02 Score=25.87 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=25.8
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhcCCC-CceEEEEeeCCeeecCCccEEEEEe
Q 028541 84 LTEEEITFVRDSLPGSCEDGFFDYLRGINC-SDVEVHAITEGSVVFPKVPLLRVEG 138 (207)
Q Consensus 84 ft~eei~~L~~~~~~~f~~~fl~~L~~~~~-~~v~I~a~~EG~lv~~~eP~i~IeG 138 (207)
++.+|.+|+++.+ +-|+.|.. ..+++ -|..++|+.+.|.|+-
T Consensus 109 ls~~E~eyf~~Ys---------~~La~y~~~~gidl----~~~~vPPk~lfI~VR~ 151 (192)
T KOG3303|consen 109 LSHEEEEYFKNYS---------NLLAEYMGPLGIDL----TGDMVPPKDLFIQVRV 151 (192)
T ss_pred hhHHHHHHHHHHH---------HHHHHHhcCccchh----ccCcCCCccceEEEEE
Confidence 5688899988753 33444322 12222 3777888888887774
No 49
>PRK10553 assembly protein for periplasmic nitrate reductase; Provisional
Probab=21.39 E-value=2.1e+02 Score=20.72 Aligned_cols=23 Identities=22% Similarity=0.289 Sum_probs=18.2
Q ss_pred CceEEEEe--eCCeeecCCccEEEEEeccch
Q 028541 114 SDVEVHAI--TEGSVVFPKVPLLRVEGPVAV 142 (207)
Q Consensus 114 ~~v~I~a~--~EG~lv~~~eP~i~IeG~~~~ 142 (207)
..++|++. ++|++ +++|||+-..
T Consensus 30 pg~Evh~~d~~~GKi------VVtiE~~~~~ 54 (87)
T PRK10553 30 PGCEVAVSDAPSGQL------IVVVEAEDSE 54 (87)
T ss_pred CCcEEEeecCCCCeE------EEEEEeCChH
Confidence 35899987 46999 6999998764
No 50
>COG5230 Uncharacterized conserved protein [Function unknown]
Probab=20.76 E-value=1.3e+02 Score=24.77 Aligned_cols=52 Identities=19% Similarity=0.221 Sum_probs=33.3
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHH
Q 028541 84 LTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLE 147 (207)
Q Consensus 84 ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~E 147 (207)
++.+|-+||++. -+.|+.++....+|. =-|.+++|.+..|.|.- +.++.-++
T Consensus 110 LSh~E~eyl~~Y---------s~ll~~ykg~~~~iD--ltgslvPP~~~FidVrv-LkD~G~i~ 161 (194)
T COG5230 110 LSHEEEEYLEKY---------SNLLREYKGPFKHID--LTGSLVPPVQFFIDVRV-LKDCGVIM 161 (194)
T ss_pred cchHHHHHHHHH---------HHHHHHHhCCceeec--cccccCCchheeEEeEe-ecccchhc
Confidence 677888888865 456666665434553 34899999988888763 33443333
No 51
>PF02186 TFIIE_beta: TFIIE beta subunit core domain; InterPro: IPR003166 Initiation of eukaryotic mRNA transcription requires melting of promoter DNA with the help of the general transcription factors TFIIE and TFIIH. In higher eukaryotes, the general transcription factor TFIIE consists of two subunits: the large alpha subunit (IPR002853 from INTERPRO) and the small beta (IPR003166 from INTERPRO). TFIIE beta has been found to bind to the region where the promoter starts to open to be single-stranded upon transcription initiation by RNA polymerase II. The approximately 120-residue central core domain of TFIIE beta plays a role in double-stranded DNA binding of TFIIE []. The TFIIE beta central core DNA-binding domain consists of three helices with a beta hairpin at the C terminus, resembling the winged helix proteins. It shows a novel double-stranded DNA-binding activity where the DNA-binding surface locates on the opposite side to the previously reported winged helix motif by forming a positively charged furrow []. This entry represents the beta subunit of the transcription factor TFIIE.; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005673 transcription factor TFIIE complex; PDB: 1D8K_A 1D8J_A.
Probab=20.63 E-value=2.2e+02 Score=19.43 Aligned_cols=49 Identities=16% Similarity=0.363 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhc--CCCCHHHH-HHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCC-ee
Q 028541 70 AGLEECIRFIAN--FKLTEEEI-TFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEG-SV 126 (207)
Q Consensus 70 ~gl~~~i~~L~~--l~ft~eei-~~L~~~~~~~f~~~fl~~L~~~~~~~v~I~a~~EG-~l 126 (207)
.-|..++++|+. -.+|-+|| +|+. . . .++.-+++|++ ++ +|...|+| +.
T Consensus 5 tql~~~VeymK~r~~Plt~~eI~d~l~-~-d--~~~~~~~~Lk~---np-KI~~d~~~~~f 57 (65)
T PF02186_consen 5 TQLAKAVEYMKKRDHPLTLEEILDYLS-L-D--IGKKLKQWLKN---NP-KIEYDPDGNTF 57 (65)
T ss_dssp HHHHHHHHHHHHH-S-B-HHHHHHHHT-S-S--S-HHHHHHHHH----T-TEEEE-TT-CE
T ss_pred hHHHHHHHHHHhcCCCcCHHHHHHHHc-C-C--CCHHHHHHHHc---CC-CEEEecCCCEE
Confidence 345556666653 34676674 4555 2 2 56677777773 23 56566787 44
No 52
>PF14567 SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A.
Probab=20.14 E-value=99 Score=24.32 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=18.5
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhcC
Q 028541 84 LTEEEITFVRDSLPGSCEDGFFDYLRGI 111 (207)
Q Consensus 84 ft~eei~~L~~~~~~~f~~~fl~~L~~~ 111 (207)
-|+|+|..+++.+.=-|+++|.+||..+
T Consensus 22 pd~e~I~~~Ee~L~i~lP~eyk~fL~~~ 49 (132)
T PF14567_consen 22 PDDEQIVEAEEQLGISLPEEYKEFLLEA 49 (132)
T ss_dssp --HHHHHHHHHHHT----HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHC
Confidence 5688899999876524899999999863
Done!