Query 028541
Match_columns 207
No_of_seqs 107 out of 1047
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 21:57:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028541.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028541hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hl7_A Naprtase, nicotinate ph 100.0 2.1E-51 7.1E-56 376.2 14.6 186 18-207 6-214 (446)
2 3os4_A Naprtase, nicotinate ph 100.0 5.5E-49 1.9E-53 357.4 18.6 178 20-207 4-203 (407)
3 1vlp_A Naprtase, nicotinate ph 100.0 3.4E-48 1.2E-52 355.6 21.1 184 16-207 9-226 (441)
4 2im5_A Nicotinate phosphoribos 100.0 5E-47 1.7E-51 343.9 20.1 171 23-207 2-195 (394)
5 1ybe_A Naprtase, nicotinate ph 100.0 1E-46 3.5E-51 346.5 18.8 181 15-207 18-231 (449)
6 1yir_A Naprtase 2, nicotinate 100.0 6.9E-46 2.3E-50 337.7 19.2 174 21-207 9-208 (408)
7 2f7f_A Nicotinate phosphoribos 100.0 4.5E-45 1.6E-49 339.1 18.2 179 25-207 9-187 (494)
8 3dhf_A Nicotinamide phosphorib 100.0 5.1E-43 1.8E-47 324.0 13.1 177 24-207 9-219 (484)
9 2i14_A Nicotinate-nucleotide p 100.0 6.8E-33 2.3E-37 251.3 13.5 149 24-207 18-166 (395)
10 2i1o_A Nicotinate phosphoribos 100.0 2.3E-31 7.8E-36 241.5 12.6 147 24-207 18-170 (398)
11 2b7n_A Probable nicotinate-nuc 99.8 7.5E-19 2.5E-23 152.1 12.8 122 46-207 26-148 (273)
12 2jbm_A Nicotinate-nucleotide p 99.8 2.6E-18 8.8E-23 150.6 10.4 120 48-207 41-163 (299)
13 3c2e_A Nicotinate-nucleotide p 99.7 6.3E-18 2.1E-22 147.8 9.7 120 48-207 37-165 (294)
14 1qap_A Quinolinic acid phospho 99.6 3E-15 1E-19 130.9 10.1 124 47-207 51-175 (296)
15 3paj_A Nicotinate-nucleotide p 99.6 2.8E-14 9.7E-19 125.7 12.5 123 46-206 74-197 (320)
16 3gnn_A Nicotinate-nucleotide p 99.5 2.4E-13 8.2E-18 118.8 11.6 123 46-206 52-175 (298)
17 3tqv_A Nicotinate-nucleotide p 99.2 4.3E-11 1.5E-15 104.0 11.8 123 46-206 41-164 (287)
18 1x1o_A Nicotinate-nucleotide p 99.2 1.2E-10 4.2E-15 101.2 11.6 137 28-206 22-161 (286)
19 1qpo_A Quinolinate acid phosph 99.1 5.6E-10 1.9E-14 97.0 12.6 122 47-205 36-159 (284)
20 1o4u_A Type II quinolic acid p 99.1 3.9E-10 1.3E-14 98.0 10.9 118 48-206 40-158 (285)
21 3l0g_A Nicotinate-nucleotide p 99.0 1.7E-09 6E-14 94.3 12.0 136 27-205 33-172 (300)
22 1g6u_A Domain swapped dimer; d 36.7 51 0.0018 19.9 3.8 26 70-95 3-28 (48)
23 2prv_A Uncharacterized protein 34.0 52 0.0018 24.5 4.5 44 70-113 5-53 (153)
24 2pag_A Hypothetical protein; n 32.3 30 0.001 25.7 2.9 28 84-111 22-49 (135)
25 2icg_A LIN2918 protein; hypoth 23.7 61 0.0021 24.2 3.3 31 83-113 26-56 (160)
26 3ne5_B Cation efflux system pr 20.3 1.6E+02 0.0053 25.6 5.7 30 121-150 223-255 (413)
No 1
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=100.00 E-value=2.1e-51 Score=376.16 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=165.5
Q ss_pred CCCCCCCcch-hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhC
Q 028541 18 SGPTNPMVTP-LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSL 96 (207)
Q Consensus 18 ~~~~~~i~~~-LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~ 96 (207)
++..+|||.+ |+||+|||||+|+||+++| +.+|+|+||+|+.|+.++|+ +||+++|++|++|+||+||++||++..
T Consensus 6 ~~~~~~iI~s~L~TDlYkltM~qa~~~~~~-~~~v~fe~f~R~~p~~~~~~--agL~~~l~~L~~l~ft~eei~yL~~~~ 82 (446)
T 4hl7_A 6 RLFSPHIIRSLLDLDAYKINMMQAIHHFYP-DVSVRYELIVRSEEDASGLL--DAIRQEIAHLGTLRFSDADIHYLTQHA 82 (446)
T ss_dssp TTCCSCSSCSTTSSBHHHHHHHHHHHHHCT-TCEEEEEEEEESCTTTHHHH--HHHHHHHHHGGGCCCCHHHHHHHHHHC
T ss_pred cccCcchhchhHHHHHHHHHHHHHHHHhCC-CCeEEEEEEECCCCCchhHH--HHHHHHHHHHHhCCCCHHHHHHHHhCC
Confidence 4445678876 6699999999999999998 89999999999999888876 999999999999999999999999874
Q ss_pred CCCCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHH------HHHH---------
Q 028541 97 PGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA------SLVT--------- 161 (207)
Q Consensus 97 ~~~f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~------~~~A--------- 161 (207)
+ +|+++|++||++|||++-++++++||++++|+||+|+|+|||.++++|||+||+|||+. +.+|
T Consensus 83 ~-~~~~~fl~yL~~frf~~~~~~av~eg~~~~~~ep~l~VeGp~~e~~L~Et~lL~iin~~~~~~~~s~ia~~~~~~~~~ 161 (446)
T 4hl7_A 83 P-HLKATFLQSLRYFHFVPQEQVEMGIVKQGGKQQLRISIRGSWRDTILYETLVMAIVSEVRSRQRWAEVPADLPLKVLK 161 (446)
T ss_dssp T-TSCHHHHHHHTTCCCCHHHHEEEEEECC----EEEEEEEEEHHHHTTHHHHHHHHHHHHHHHHHCTTSCTTHHHHHHH
T ss_pred C-CCCHHHHHHHHhCCCCCeEEEEEeccccCcCCEEEEEEEEEHHHHhHHHHHHHHHHHHHHHhccCccccHHHHHHHHH
Confidence 4 89999999999999986339999999999999999999999999999999999999998 5665
Q ss_pred hHHHHHHHHhC----CCCcEeeccCCCCCCcc---hHHHHHHHHhhcCccccC
Q 028541 162 TNAARHRFVAG----KSKMLLEFGLRRAQGPD---GGIGASKYCYIGGFDATR 207 (207)
Q Consensus 162 T~a~r~~~~a~----~~~~~~dFGtRr~~~~~---~~~~~~raa~igG~~gtS 207 (207)
||+.|++.+|+ .+++|+|||+|||||++ +++.++|++++|||+|||
T Consensus 162 tKa~rl~~aA~~~~~~~~~l~eFGtRR~~s~~~Q~~~v~~~raa~iggf~GTS 214 (446)
T 4hl7_A 162 TKLDQLKAEIERRGINNFSLTEMGTRRRFSSQVQRDVLACLKQEIPQWVLGTS 214 (446)
T ss_dssp HHHHHHHHHHHHHTCCCCCEEECCSTTCSCHHHHHHHHHHHHHHCGGGEEEES
T ss_pred HHHHHHHHhhcccccCCCeEEecccccccChHHHHHHHHHHHHHhhCCCEeEh
Confidence 89999999875 37999999999999986 578899999999999998
No 2
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=100.00 E-value=5.5e-49 Score=357.42 Aligned_cols=178 Identities=19% Similarity=0.305 Sum_probs=161.8
Q ss_pred CCCCCcchhh-hhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCC
Q 028541 20 PTNPMVTPLL-NDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPG 98 (207)
Q Consensus 20 ~~~~i~~~Ll-TD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~ 98 (207)
..+||+.+++ ||+|||||+|++|+++| +.+|+|+||+|++|+.+++ ++||+++|++|++++||+||++||++ |+
T Consensus 4 ~~~~ii~s~L~TDlY~ltM~~a~~~~~~-~~~v~fe~f~R~~~~~~~~--~agl~~~l~~l~~l~ft~~ei~yL~~-~~- 78 (407)
T 3os4_A 4 DASPILTSLLDTDAYKLHMQQAVFHHYR-HITVAAEFRCRSDELLGVY--ADEIRHQVTLMGQLALTSDEFIYLSS-LP- 78 (407)
T ss_dssp TTSCSCCCTTSSBHHHHHHHHHHHHHCT-TCEEEEEEEECSSCCCGGG--HHHHHHHHHHHTTCCCCHHHHHHHHT-SS-
T ss_pred cccchhccchhhhhHHHHHHHHHHHhCC-CCeEEEEEEEcCCCchhhH--HHHHHHHHHHHHhCCCCHHHHHHHHh-CC-
Confidence 3467888755 99999999999999999 8999999999998755554 49999999999999999999999995 57
Q ss_pred CCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHH---------------HHHHhH
Q 028541 99 SCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVTTN 163 (207)
Q Consensus 99 ~f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~---------------~~~AT~ 163 (207)
+|+++|++||++|||++ ++++++| +|+||+|+|+|||.++++|||+||+|||+. +.+|||
T Consensus 79 ~~~~~fl~yL~~frf~~-~~~~~~e----~~~ep~l~I~Gp~~e~~l~Et~lL~iin~~~~~~~~~~~~~~~~~s~iatK 153 (407)
T 3os4_A 79 FFQDDYLHWLRDFRFKP-EQVSVAV----HDGKLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQAVQQLRTK 153 (407)
T ss_dssp SCCHHHHHHHHHCCCCG-GGEEEEE----ETTEEEEEEEEEHHHHTTSHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCc-eEEEEec----CCCcEEEEEEEEHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Confidence 99999999999999985 7888888 899999999999999999999999999985 678999
Q ss_pred HHHHHHHhC----CCCcEeeccCCCCCCcch--HHHHHHHHhhcCccccC
Q 028541 164 AARHRFVAG----KSKMLLEFGLRRAQGPDG--GIGASKYCYIGGFDATR 207 (207)
Q Consensus 164 a~r~~~~a~----~~~~~~dFGtRr~~~~~~--~~~~~raa~igG~~gtS 207 (207)
+.|++.+|+ ++++++|||+||+||+++ ++..++++++|||+|||
T Consensus 154 a~r~~~aa~~~~~~~~~~~eFGtRR~~s~~~q~~v~~~~~a~iggf~GTS 203 (407)
T 3os4_A 154 LEQFNALSADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTS 203 (407)
T ss_dssp HHHHHHHTTTSCCTTCCEEECCSTTCSCHHHHHHHHHHHHHHCTTEEEES
T ss_pred HHHHHHhhhccccCCCeEEecccccccCHHHHHHHHHHHHHHhCCceeEh
Confidence 999999872 479999999999999984 68889999999999998
No 3
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=100.00 E-value=3.4e-48 Score=355.64 Aligned_cols=184 Identities=19% Similarity=0.255 Sum_probs=164.5
Q ss_pred CCCCCCCCCcch-hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcc--hHHHHHHHHHHHHhcCCCCHHHHHHH
Q 028541 16 SVSGPTNPMVTP-LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEY--TIFAGLEECIRFIANFKLTEEEITFV 92 (207)
Q Consensus 16 ~~~~~~~~i~~~-LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~--~v~~gl~~~i~~L~~l~ft~eei~~L 92 (207)
.|.-|.+|||++ |+||+||+||+|+||+++| +.+|+|+||+|+ |+. +| .|++||+++|++|++++||+||++||
T Consensus 9 ~~~~~~~~ii~s~L~TD~YkltM~~a~~~~~~-~~~~~f~~~~R~-p~~-~~~~~v~~GL~~~l~~l~~l~ft~eei~yL 85 (441)
T 1vlp_A 9 HHHHMSEPVIKSLLDTDMYKITMHAAVFTNFP-DVTVTYKYTNRS-SQL-TFNKEAINWLKEQFSYLGNLRFTEEEIEYL 85 (441)
T ss_dssp -CCCCCCCSCCCTTSSBHHHHHHHHHHHHHCT-TCEEEEEEEESC-TTC-CBCHHHHHHHHHHHHHGGGCCCCHHHHHHH
T ss_pred cccccccchhhhhhhhHHHHHHHHHHHHHhCC-CCEEEEEEEEeC-CCc-cchHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 355677888887 5599999999999999999 588999999998 544 78 78999999999999999999999999
Q ss_pred HhhCCCCCChhHHHHH--hcCCCCc---eEEEEeeC-CeeecCCccEEEEEeccchhHHHHHHHHHHHHHH---------
Q 028541 93 RDSLPGSCEDGFFDYL--RGINCSD---VEVHAITE-GSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA--------- 157 (207)
Q Consensus 93 ~~~~~~~f~~~fl~~L--~~~~~~~---v~I~a~~E-G~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~--------- 157 (207)
++.++ +|+++||+|| ++|++.+ |+|+++|| |++++ ++|+|+|+|||.++++|||+||++|||+
T Consensus 86 ~~~~~-~f~~~fl~~L~~~~f~~~~~~~v~I~a~~EgGt~v~-~ep~l~IeGp~~~~~llET~lL~ii~e~~~~~v~t~~ 163 (441)
T 1vlp_A 86 KQEIP-YLPSAYIKYISSSNYKLHPEEQISFTSEEIEGKPTH-YKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDW 163 (441)
T ss_dssp HHHCT-TSCHHHHHHHHSTTCCCCHHHHEEEEEEEETTEEEE-EEEEEEEEEEHHHHTTSHHHHHHHHHHHHHHHTCCCC
T ss_pred HhhcC-CCCHHHHHHHHhcccCcCCCceEEEEEecCCCceEC-CEEEEEEEEcHHHHHHHHHHHHHHHHHHhhccccchh
Confidence 88777 9999999999 8888865 99999999 99999 9999999999999999999999999966
Q ss_pred ------HHHHhHHHHHHHHhCCCCcEeeccCCCCCCcch---HHHHHHHH-------hhcCccccC
Q 028541 158 ------SLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDG---GIGASKYC-------YIGGFDATR 207 (207)
Q Consensus 158 ------~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~---~~~~~raa-------~igG~~gtS 207 (207)
+.+||++.+++ +. +++|+|||+||+||+++ ++.+++++ ++|||+|||
T Consensus 164 ~~~~~~~~iatka~r~~--a~-~~~l~dFG~RR~~~~~~q~~a~~~~~a~~~~~~~~~iggf~GTS 226 (441)
T 1vlp_A 164 DYENQLEQAEKKAETLF--DN-GIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNPDRNKSLLLGTS 226 (441)
T ss_dssp CCTTHHHHHHHHHHHHH--HT-TCCEEECCSTTCSCHHHHHHHHHHHHHHHHHSHHHHTTTEEEES
T ss_pred hHHHHHHHHHHHHHHhc--cC-CCeEEecCCCCcCChHHHHHHHHHHHhhhcccccceeeeEEeec
Confidence 67889999876 44 78999999999999988 56655554 899999998
No 4
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=100.00 E-value=5e-47 Score=343.85 Aligned_cols=171 Identities=24% Similarity=0.300 Sum_probs=155.1
Q ss_pred CCcch-hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcc-h-HHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCC
Q 028541 23 PMVTP-LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEY-T-IFAGLEECIRFIANFKLTEEEITFVRDSLPGS 99 (207)
Q Consensus 23 ~i~~~-LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~-~-v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~ 99 (207)
+||++ |+||+||+||+|+||+++| +++|+|+||+|+ |+ +| . +++||+++|++|++++||++|++||++.++ +
T Consensus 2 ~ii~~~L~TD~Ykltm~~~~~~~~~-~~~v~f~~~~R~-~~--~~~~~v~~gL~~~l~~l~~~~ft~~ei~yL~~~~~-~ 76 (394)
T 2im5_A 2 GIIRSILDTDLYKFTTGYAYAKLFP-RAYGEFRFIDRN-RQ--GFTEEFAELVRGEIRAMAALSLTRDEKEFLQRELP-Y 76 (394)
T ss_dssp -CCCCTTCSBHHHHHHHHHHHHHCT-TCEEEEEEEETT-CC--CCCHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHCT-T
T ss_pred chhhhhHHHHhhHHHHHHHHHHhCC-CCEEEEEEEeCC-CC--chhhHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCC-C
Confidence 46766 5599999999999999999 899999999999 43 46 5 889999999999999999999999977777 9
Q ss_pred CChhHHHHHhcCCCC--ceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHH---------------HHHHh
Q 028541 100 CEDGFFDYLRGINCS--DVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVTT 162 (207)
Q Consensus 100 f~~~fl~~L~~~~~~--~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~---------------~~~AT 162 (207)
|+++||+||++|+++ +|+|+++|||+ |+|+|+|||.++++|||+||++|||+ +.++|
T Consensus 77 f~~~fl~~L~~~r~~~~~v~I~a~~EGe------p~l~I~Gp~~~~~l~Et~lL~ii~e~~~~~Vat~~~~~~~~~~iat 150 (394)
T 2im5_A 77 LPPIYIDFLDGFRFDPEEVTVSIDAQGH------LDIRAQGLLYRVTLWETPILAVISELYYRFIGAEPDWKQVEEVTRS 150 (394)
T ss_dssp SCHHHHHHHHHCCCCGGGEEEEECTTSC------EEEEEEEEHHHHGGGHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceEEEEEcCCCc------EEEEEEecHHHHHHHHHHHHHHHHHHhhhhhhccchHHHHHHHHHH
Confidence 999999999998864 69999999995 69999999999999999999999976 67789
Q ss_pred HHHHHHHHhCCCCcEeeccCCCCCCcchH---HHHHHHHhhcCccccC
Q 028541 163 NAARHRFVAGKSKMLLEFGLRRAQGPDGG---IGASKYCYIGGFDATR 207 (207)
Q Consensus 163 ~a~r~~~~a~~~~~~~dFGtRr~~~~~~~---~~~~raa~igG~~gtS 207 (207)
++.++ ++. +++++|||+||+||++++ +.++|++++|||+|||
T Consensus 151 ka~r~--a~~-~~~l~dFG~RR~~~~~~~~~~~~~~ra~~~~gf~GTS 195 (394)
T 2im5_A 151 KGELM--REH-RATFSIFGMRRRFSLEVEDRVTDILKQYAGESLFGTS 195 (394)
T ss_dssp HHHHH--HHT-TCCEEECCSTTCSCHHHHHHHHHHHHHHSGGGEEEES
T ss_pred HHHHH--hCC-CCEEEEcCCcccccHHHHHHHHHHHHHHhhCCeeeee
Confidence 98886 554 799999999999999888 9999999999999998
No 5
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=100.00 E-value=1e-46 Score=346.49 Aligned_cols=181 Identities=19% Similarity=0.184 Sum_probs=163.3
Q ss_pred CCCCCCCCCCcch-hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCC-CCcchHHHHHHHHHHHHhcCCCCHHHHHHH
Q 028541 15 RSVSGPTNPMVTP-LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPF-GGEYTIFAGLEECIRFIANFKLTEEEITFV 92 (207)
Q Consensus 15 ~~~~~~~~~i~~~-LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~-~~~~~v~~gl~~~i~~L~~l~ft~eei~~L 92 (207)
-||++..++|+++ |+||+||+||+|+||+++| +.+|+|+||+|+.|+ .++|++++||+++|++|++++||+||++||
T Consensus 18 ~~~~~~~~~ii~s~L~TD~YkltM~~~~~~~~p-~~~v~f~~~~R~~p~~~~~~~v~aGL~~~l~~l~~~~ft~eei~yL 96 (449)
T 1ybe_A 18 HNHTWKLDPIVRSLIDTDFYKLLMLQMIWKLYP-EVDATFSLINRTKTVRLAEEIDEMELREQLDHARTLRLSKKENIWL 96 (449)
T ss_dssp ----CCCCCSCCCTTCSBHHHHHHHHHHHHHCT-TCBEEEEEEESCCSSCSTTTSCHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred ccCCccCChhhhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEEECCCCccCcchhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4577777888876 5699999999999999999 577999999999887 788999999999999999999999999999
Q ss_pred HhhCCCC------CChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHH---------
Q 028541 93 RDSLPGS------CEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA--------- 157 (207)
Q Consensus 93 ~~~~~~~------f~~~fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~--------- 157 (207)
+. ++ + |+++||+||++|++.+ +|+++||| ||+|+|+|||.++++|||+||++||++
T Consensus 97 ~~-~~-~~~~~~~f~~~fl~~L~~~~~~~-~i~a~~EG------ep~l~I~Gp~~~~~llET~lL~ii~~~~~t~a~~t~ 167 (449)
T 1ybe_A 97 AG-NT-FYGRSQIFEPEFLSWLSSYQLPE-YELFKRDG------QYELNFHGRWMDTTLWEIPALSIINELRSRSAMRSL 167 (449)
T ss_dssp HH-SC-SSSCSCCSCHHHHHHHHTCCCCC-CEEEECSS------CEEEEECSBHHHHGGGHHHHHHHHHHHHHHHHHTSC
T ss_pred Hh-cc-cccCCCCCCHHHHHHHHhCCCCc-eEEEecCC------eEEEEEEecHHHHHHHHHHHHHHHhhhhhccccccc
Confidence 77 45 6 9999999999999986 99999999 579999999999999999999999999
Q ss_pred -------------HHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHH--HHhh-cCccccC
Q 028541 158 -------------SLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASK--YCYI-GGFDATR 207 (207)
Q Consensus 158 -------------~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~r--aa~i-gG~~gtS 207 (207)
+.++|+++|+ .++. +++++|||+||+||++++.+++| ++++ |||+|||
T Consensus 168 ~~~~~s~~~~~~~~~iatka~r~-~~a~-~~~l~dFG~RR~~s~~~~~~~~r~~aa~l~~gf~GTS 231 (449)
T 1ybe_A 168 GYFTLDVLYARAKAKMWEKVERL-RELP-GLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFTGTS 231 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTCT-TCCEEECCTTTCSCHHHHHHHHHHHHHHHGGGEEEES
T ss_pred ccccchhhHHHHHHHHHHHHHHH-hccC-CCeEEecCCcccCcHHHHHHHHHHHHHHhcCCceeee
Confidence 8889999998 4554 79999999999999999999999 9999 9999998
No 6
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=100.00 E-value=6.9e-46 Score=337.69 Aligned_cols=174 Identities=20% Similarity=0.313 Sum_probs=156.2
Q ss_pred CCCCcch-hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCC-CcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCC
Q 028541 21 TNPMVTP-LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFG-GEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPG 98 (207)
Q Consensus 21 ~~~i~~~-LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~-~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~ 98 (207)
++|||++ |+||+||+||+|+||+++| +.+|+|+||+|+ |+. ++| ++||+++|++|++++||+|||+||++ ++
T Consensus 9 ~~~iI~~~L~TD~YkltM~~~~~~~~~-~~~~~f~~~~R~-~~~~~~~--~~GL~~~l~~l~~~~ft~~ei~yL~~-~~- 82 (408)
T 1yir_A 9 SERIVQNLLDTDFYKLTMMQAVLHNYP-NAEVEWEFRCRN-QEDLRLY--LPAIREQLEYLAGLAISDEQLAFLER-IP- 82 (408)
T ss_dssp CSCSSCSTTSSBHHHHHHHHHHHHHCT-TCEEEEEEEETT-CCCCGGG--HHHHHHHHHHHHHCCCCHHHHHHHHT-ST-
T ss_pred cchHHHhHHHHHHHHHHHHHHHHHhCC-CCEEEEEEEecC-CCCcccH--HHHHHHHHHHHHhCCCCHHHHHHHHh-CC-
Confidence 3567776 5599999999999999999 899999999999 764 565 69999999999999999999999977 46
Q ss_pred CCChhHHHHHhcCCCC--ceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHH---------------HHHH
Q 028541 99 SCEDGFFDYLRGINCS--DVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVT 161 (207)
Q Consensus 99 ~f~~~fl~~L~~~~~~--~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~---------------~~~A 161 (207)
+|+++||+||++|+++ +|+|++ |||++ +|+|+|||.++++|||+||++||++ +.+|
T Consensus 83 ~f~~~fl~~L~~~rf~~~~v~I~a-~EG~~------~l~i~Gp~~~~~llEt~lL~ii~~~~~~~~~~~~~~~~~~~~ia 155 (408)
T 1yir_A 83 FLAPDFIRFLGLFRFNPRYVQTGI-ENDEF------FLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQ 155 (408)
T ss_dssp TSCHHHHHHHHHCCCCGGGEEEEE-ETTEE------EEEEEEEHHHHGGGHHHHHHHHHHHHHHHHCTTCBHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCCceEEEEc-CCCcE------EEEEEecHHHHHHHHHHHHHHHHhhHhhccCCccchHHHHHHHH
Confidence 9999999999998875 599999 99985 7999999999999999999999996 7779
Q ss_pred hHHHHHHHHhC----CCCcEeeccCCCCCCcchHHHHHH--HHhh-cCccccC
Q 028541 162 TNAARHRFVAG----KSKMLLEFGLRRAQGPDGGIGASK--YCYI-GGFDATR 207 (207)
Q Consensus 162 T~a~r~~~~a~----~~~~~~dFGtRr~~~~~~~~~~~r--aa~i-gG~~gtS 207 (207)
|++.+++.+++ .+++++|||+||+||++++..+++ ++++ |||+|||
T Consensus 156 tK~~rl~~aa~~~~~~~~~l~dFG~RR~~~~~~~~~~~~~~~a~l~~gf~GTS 208 (408)
T 1yir_A 156 EKFDWLRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTS 208 (408)
T ss_dssp HHHHHHHTTSCHHHHTTCEEEECCSTTCSCHHHHHHHHHHHHHHCSSEEEEES
T ss_pred HHHHHHHHhhcccccCCCeEEEecCcccccHHHHHHHHHHHHHHhcCCceeEe
Confidence 99999887764 268999999999999998877777 7788 8999998
No 7
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=4.5e-45 Score=339.05 Aligned_cols=179 Identities=41% Similarity=0.762 Sum_probs=170.7
Q ss_pred cchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhH
Q 028541 25 VTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGF 104 (207)
Q Consensus 25 ~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~f 104 (207)
+..|+||+||+||+|+||++||++.+++|+||+|+.|++++|.|++||++++++|++++||++|++||++. + +|+++|
T Consensus 9 ~~~L~TD~Ykltm~~~~~~~g~~~~~~~f~~~~R~~p~~~~~~v~aGl~~~l~~l~~l~ft~~ei~yl~~~-~-~f~~~f 86 (494)
T 2f7f_A 9 SLTLHTDMYQINMMQTYWELGRADLHAVFECYFREMPFNHGYAIFAGLERLVNYLENLTFTESDIAYLREV-E-EYPEDF 86 (494)
T ss_dssp CSTTCSCHHHHHHHHHHHHTTCTTCEEEEEEECSSCGGGCSCEECCCHHHHHHHHHTCCCCHHHHHHHHHT-S-CCCHHH
T ss_pred CcchhcchhHHHHHHHHHHhCCCCCEEEEEEEECCCCCCCceEehHhHHHHHHHHHhCCCCHHHHHHHHhc-C-CCCHHH
Confidence 34578999999999999999998899999999999888889999999999999999999999999999875 5 999999
Q ss_pred HHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCC
Q 028541 105 FDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRR 184 (207)
Q Consensus 105 l~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr 184 (207)
|+||++|++. ++|++++||++++|++|+++|+|||.+++++||++|++||+.|.+||++++++.+++ +++++||||||
T Consensus 87 l~~L~~~~f~-~~i~av~EG~~v~~g~pll~v~Gp~~~~~~~Et~lLnil~~~S~IAT~a~r~v~aa~-~~~v~~fgtRr 164 (494)
T 2f7f_A 87 LTYLANFEFK-CTVRSALEGDLVFNNEPLIQIEGPLAQCQLVETALLNMVNFQTLIATKAARIKSVIG-DDPLLEFGTRR 164 (494)
T ss_dssp HHHHHTCCCC-CEEEECCTTCEECTTSCSEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSCEEECCGGG
T ss_pred HHHHHhCCCC-ceEEEecCCCcccCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCceEEeccCC
Confidence 9999999996 599999999999999999999999999999999999999999999999999999997 78999999999
Q ss_pred CCCcchHHHHHHHHhhcCccccC
Q 028541 185 AQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 185 ~~~~~~~~~~~raa~igG~~gtS 207 (207)
+++++++..++|+|++|||.|||
T Consensus 165 ~~~~~~a~~~~raa~~gG~~gts 187 (494)
T 2f7f_A 165 AQELDAAIWGTRAAYIGGADATS 187 (494)
T ss_dssp SSSHHHHHHHHHHHHHHTCCEES
T ss_pred CCcHHHHHHHhHHHHhCCcccch
Confidence 99999999999999999999997
No 8
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=100.00 E-value=5.1e-43 Score=323.96 Aligned_cols=177 Identities=21% Similarity=0.290 Sum_probs=155.9
Q ss_pred CcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCC---------CCCcchHHHHHHHHH-HHHhcCCCCHHHHHHHH
Q 028541 24 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNP---------FGGEYTIFAGLEECI-RFIANFKLTEEEITFVR 93 (207)
Q Consensus 24 i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~---------~~~~~~v~~gl~~~i-~~L~~l~ft~eei~~L~ 93 (207)
.+..|+||+||+||.++| |++.+++|++|.|+.+ +..+|+|++||+++| ++|++++||++||+||+
T Consensus 9 ~n~~L~tD~YK~th~~~Y----p~~~~~v~s~f~~R~~~~~~~~~~~~~~~~~v~~GL~~~l~~~l~~~~ft~~di~~l~ 84 (484)
T 3dhf_A 9 FNILLATDSYKVTHYKQY----PPNTSKVYSYFECREKKTENSKLRKVKYEETVFYGLQYILNKYLKGKVVTKEKIQEAK 84 (484)
T ss_dssp CCGGGSSBGGGGGGGGTS----CTTEEEEEEEEEECC------------CCEEECCCHHHHHHHHTSSCCCCHHHHHHHH
T ss_pred cchhhhhHhHHHHHHHhc----cCCCeEEEEEEEEcCCCccccccccccCCeeeeHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 345578999999997775 6578899998877664 156889999999999 79999999999999999
Q ss_pred hhCC-----CCCChhHHHHHhc---CCCCceEEEEeeCCeeecCCccEEEEEeccc----hhHHHHHHHHHHHHHHHHHH
Q 028541 94 DSLP-----GSCEDGFFDYLRG---INCSDVEVHAITEGSVVFPKVPLLRVEGPVA----VVQLLETPFVNLINYASLVT 161 (207)
Q Consensus 94 ~~~~-----~~f~~~fl~~L~~---~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~----~~~l~Et~lL~ii~~~~~~A 161 (207)
+.|+ .+|+++||+||++ +++ +++|+|+|||++|||+||+|+|+||.. ++++|||+||+ ||+++++|
T Consensus 85 ~~~~~~~g~~~f~~~f~~~L~~~~~~~~-~~~I~A~pEGt~v~~~~Pll~Ve~~~~~f~w~~~llET~Ll~-l~~~s~vA 162 (484)
T 3dhf_A 85 DVYKEHFQDDVFNEKGWNYILEKYDGHL-PIEIKAVPEGFVIPRGNVLFTVENTDPECYWLTNWIETILVQ-SWYPITVA 162 (484)
T ss_dssp HHHHHHHTSCCCCHHHHHHHHHHHTTCC-CEEEEECCTTCEEETTSCCEEEEESSGGGTTHHHHTHHHHHT-THHHHHHH
T ss_pred HhhhhhcccCcCCHHHHHHHHhccCCCC-ceEEEEECCCccccCCCcEEEEEEcCcchhhhhhhHHHHHHH-HHHHHHHH
Confidence 9862 3899999999998 676 699999999999999999999999976 88999999999 99999999
Q ss_pred hHHHHHHHHh------------CCCCcEeeccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 162 TNAARHRFVA------------GKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 162 T~a~r~~~~a------------~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
|+|+|+|.++ +.+++++|||+||+||+++++.++ +|++|||+|||
T Consensus 163 T~A~r~~~~~~~~~~~t~~~~~~~~~~l~dFG~Rr~~~~~~a~~~~-aa~i~gf~GTS 219 (484)
T 3dhf_A 163 TNSREQKKILAKYLLETSGNLDGLEYKLHDFGYRGVSSQETAGIGA-SAHLVNFKGTD 219 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCTTGGGSEEECCTTTSSCHHHHHHHH-HHHTTTCCBBS
T ss_pred HHHHHHHHHHHHHHHhhccccccCCCeEEecCCCcccchHHHHHHH-HHHhcCCceEh
Confidence 9999999863 236899999999999999887766 99999999998
No 9
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=100.00 E-value=6.8e-33 Score=251.31 Aligned_cols=149 Identities=23% Similarity=0.375 Sum_probs=139.1
Q ss_pred CcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChh
Q 028541 24 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDG 103 (207)
Q Consensus 24 i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~ 103 (207)
|...|+||+|+++|++++|++++ +.+++|+||+|+.|+++++.|++|++++++.++++
T Consensus 18 I~~~L~tD~Y~~tm~~~~~~~g~-~~~~~~~~~~R~~p~~~~~~v~aGl~~~~~~l~~~--------------------- 75 (395)
T 2i14_A 18 IKAGKTTDVYFLRTKKILEVKNI-RKKVLADVTTTSLPNNWRWGVLVGVEEVAKLLEGI--------------------- 75 (395)
T ss_dssp HHHTTTSBHHHHHHHHHHHHTTC-CCEEEEEEECSCCGGGCSCEECCCHHHHHHHHTTS---------------------
T ss_pred HHHHHHhhchHHHHHHHHHHhCC-CCeEEEEEEEcCCCCCCCceEeccHHHHHHHHhCC---------------------
Confidence 34457799999999999999999 89999999999988888898999999999888741
Q ss_pred HHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCC
Q 028541 104 FFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLR 183 (207)
Q Consensus 104 fl~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtR 183 (207)
+++|++++||++++|++|+++|+|||.+++++|+++|++||+.|.+||++++++.+++ +.++++||||
T Consensus 76 -----------~~~i~~~~eG~~v~~ge~ll~v~G~~~~~~~~E~~~Lnil~~~SgIAT~a~r~v~aa~-~~~~~~fgtR 143 (395)
T 2i14_A 76 -----------PVNVYAMPEGTIFHPYEPVLQIEGDYADFGIYETALLGMLSQASGIATAALRIKIAAK-FKPVYSFGIR 143 (395)
T ss_dssp -----------SEEEEECCTTCEECTTSCSEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTT-TCCEEECGGG
T ss_pred -----------CcEEEEEcCCCEecCCCEEEEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEcCC
Confidence 4789999999999999999999999999999999999999999999999999999997 7899999999
Q ss_pred CCCCcchHHHHHHHHhhcCccccC
Q 028541 184 RAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 184 r~~~~~~~~~~~raa~igG~~gtS 207 (207)
|++ |.++....||+++|||+|||
T Consensus 144 rt~-p~~~~~~~~A~~iGG~~~ts 166 (395)
T 2i14_A 144 HMH-PAIAPMIDRAAFIGGCDGVS 166 (395)
T ss_dssp GSC-GGGHHHHHHHHHHTTCSEES
T ss_pred CCC-HHHHHHHHHHHhcCCceecc
Confidence 999 99999999999999999997
No 10
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=99.97 E-value=2.3e-31 Score=241.52 Aligned_cols=147 Identities=29% Similarity=0.481 Sum_probs=136.0
Q ss_pred CcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChh
Q 028541 24 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDG 103 (207)
Q Consensus 24 i~~~LlTD~Ykltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~ 103 (207)
|...|+||+|+++|+++++++++ +.+++|+||+|+.|+ ++.|++|++++++.++++
T Consensus 18 I~~~L~tD~Y~~tm~~~~~~~~~-~~~~~~~~~~R~~p~--~~~v~aGl~~~~~~l~~~--------------------- 73 (398)
T 2i1o_A 18 IKKGLASDVYFERTISAIGDKCN-DLRVAMEATVSGPLD--TWINFTGLDEVLKLLEGL--------------------- 73 (398)
T ss_dssp HHHTCSSCTHHHHHHHHHGGGGG-GCEEEEEEEECSCCS--SCEECCCHHHHHHHHTTS---------------------
T ss_pred HHHHHHhhhhHHHHHHHHHHhCC-CCeEEEEEEECCCCC--cceEEcCHHHHHHHHhhC---------------------
Confidence 34457799999999999999999 899999999999876 677899999999888741
Q ss_pred HHHHHhcCCCCceEEEEeeCCeeecCCc------cEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcE
Q 028541 104 FFDYLRGINCSDVEVHAITEGSVVFPKV------PLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKML 177 (207)
Q Consensus 104 fl~~L~~~~~~~v~I~a~~EG~lv~~~e------P~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~ 177 (207)
+++|++++||+.++|++ |+++|+|||.+++++|+++|++||+.|.+||++++++.+++ +.++
T Consensus 74 -----------~~~i~~~~eG~~v~~g~~~g~~~~ll~v~G~~~~~~~~E~~~Lnil~~~SgIAT~a~r~v~aa~-~~~~ 141 (398)
T 2i1o_A 74 -----------DVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQASGISTKASKVRLAAG-DSPF 141 (398)
T ss_dssp -----------SCEEEECCTTCEECSBCTTSCBCEEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHT-TSCE
T ss_pred -----------CeEEEEeCCCCEECCCCcccccceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCE
Confidence 36888999999999999 99999999999999999999999999999999999999997 7899
Q ss_pred eeccCCCCCCcchHHHHHHHHhhcCccccC
Q 028541 178 LEFGLRRAQGPDGGIGASKYCYIGGFDATR 207 (207)
Q Consensus 178 ~dFGtRr~~~~~~~~~~~raa~igG~~gtS 207 (207)
++|||||++ |.++....||+++|||++||
T Consensus 142 ~~fgtRrt~-p~~~~~~~~A~~iGG~~~ts 170 (398)
T 2i1o_A 142 FSFGIRRMH-PAISPMIDRSAYIGGADGVS 170 (398)
T ss_dssp EECCGGGSC-GGGHHHHHHHHHHTTCSEEC
T ss_pred EEecCCCCC-HHHHHHHHHHHhcCCceeec
Confidence 999999999 99999999999999999987
No 11
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=99.79 E-value=7.5e-19 Score=152.11 Aligned_cols=122 Identities=19% Similarity=0.236 Sum_probs=110.9
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
|.+..++++++.|+ +.|++|+.++.+.++.+ .++| ++++||
T Consensus 26 ~~~~~~~~~~~~r~------~~v~aG~~~~~~~~~~~--------------------------------~~~v~~~~~eG 67 (273)
T 2b7n_A 26 EKDFKATAFVRAKQ------EGVFSGEKYALELLEMT--------------------------------GIECVQTIKDK 67 (273)
T ss_dssp SCCCEEEEEEEESS------CEECCCHHHHHHHHHHT--------------------------------TCEEEEECCTT
T ss_pred CCCCeEEEEEEEcC------CEEEEcHHHHHHHHHHC--------------------------------CcEEEEEcCCC
Confidence 34789999999996 34889999999988863 1678 689999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.++|++|+++|+||..++...|+.+|++|++.|.+||++++++.+++ +.++..||||+.+ |.......||+++||++
T Consensus 68 ~~v~~g~~~~~v~G~~~~~l~~Er~~Ln~l~~~SgIAT~t~~~v~a~~-~~~~~~~~tRkt~-p~~r~~~~~A~~~gG~~ 145 (273)
T 2b7n_A 68 ERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEALN-SHKVRLLDTRKTR-PLLRIFEKYSVLNGGAS 145 (273)
T ss_dssp CEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CSSSEEECCSCCC-TTCHHHHHHHHHTTTCC
T ss_pred CCcCCCCEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCCC-hhhHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999999999999997 6789999999998 88999999999999998
Q ss_pred ccC
Q 028541 205 ATR 207 (207)
Q Consensus 205 gtS 207 (207)
++|
T Consensus 146 ~hr 148 (273)
T 2b7n_A 146 NHR 148 (273)
T ss_dssp CCC
T ss_pred ceE
Confidence 765
No 12
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=99.75 E-value=2.6e-18 Score=150.57 Aligned_cols=120 Identities=20% Similarity=0.194 Sum_probs=109.0
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG~l 126 (207)
+..++++++.|+ +.|++|++++.+.++.+ .++| ++++||+.
T Consensus 41 ~~~~~~~~~~r~------~~v~aG~~~~~~~~~~~--------------------------------~~~v~~~~~dG~~ 82 (299)
T 2jbm_A 41 AGPSQAALWAKS------PGVLAGQPFFDAIFTQL--------------------------------NCQVSWFLPEGSK 82 (299)
T ss_dssp SCEEEEEEEECS------CEECCCHHHHHHHHHHT--------------------------------TCEEEESSCTTCE
T ss_pred CCeEEEEEEEcC------CEEEEcHHHHHHHHHHc--------------------------------CCEEEEEcCCCCC
Confidence 678999999996 34889999999988863 1677 68999999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCc--EeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKM--LLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 127 v~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~--~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
++|++|+++|+||..++...|+.+|++|++.|.+||++++++.+++ +.+ +..||||+.+ |.......||+++||++
T Consensus 83 v~~g~~l~~v~G~~~~~l~~Er~~Ln~l~~~SgIAT~t~~~v~a~~-~~~~~~~~~~tRkt~-p~~r~~e~~A~~~GG~~ 160 (299)
T 2jbm_A 83 LVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAAR-GAGWTGHVAGTRKTT-PGFRLVEKYGLLVGGAA 160 (299)
T ss_dssp ECSSEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSEEECCSCCC-TTCHHHHHHHHHHTTCB
T ss_pred CCCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCceEEeecCCCC-hhhHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999999999986 556 8999999999 89999999999999998
Q ss_pred ccC
Q 028541 205 ATR 207 (207)
Q Consensus 205 gtS 207 (207)
++|
T Consensus 161 ~hr 163 (299)
T 2jbm_A 161 SHR 163 (299)
T ss_dssp CCC
T ss_pred cee
Confidence 765
No 13
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=99.73 E-value=6.3e-18 Score=147.79 Aligned_cols=120 Identities=20% Similarity=0.283 Sum_probs=109.0
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG~l 126 (207)
+..+++++|.|+ +.|++|+.++.+.++.+ .++| ++++||+.
T Consensus 37 ~~~~~~~~~~r~------~~v~aG~~~~~~~~~~~--------------------------------~~~v~~~~~eG~~ 78 (294)
T 3c2e_A 37 SDLKEANLYCKQ------DGMLCGVPFAQEVFNQC--------------------------------ELQVEWLFKEGSF 78 (294)
T ss_dssp SCEEEEEEEECS------SEECCCHHHHHHHHHHT--------------------------------TCEEEESSCTTCE
T ss_pred CCeEEEEEEECC------CEEEEcHHHHHHHHHHc--------------------------------CCEEEEEeCCCCE
Confidence 689999999996 34889999999988863 1677 68999999
Q ss_pred ecCC------ccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCc--EeeccCCCCCCcchHHHHHHHH
Q 028541 127 VFPK------VPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKM--LLEFGLRRAQGPDGGIGASKYC 198 (207)
Q Consensus 127 v~~~------eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~--~~dFGtRr~~~~~~~~~~~raa 198 (207)
++|+ +|+++|+||..++...|+.+|++|++.|.+||++++++.+++ +.+ +..||||+.+ +.......||+
T Consensus 79 v~~g~~~~~~~~l~~v~G~~~~~l~~Er~~Ln~l~~~SgIAT~t~~~v~aa~-~~~~~~~~~~tRkt~-p~~r~~e~~A~ 156 (294)
T 3c2e_A 79 LEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLAR-STGYKGTIAGTRKTT-PGLRRLEKYSM 156 (294)
T ss_dssp ECGGGSSSSCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSEEECCSCCC-TTCHHHHHHHH
T ss_pred eCCCCCCCCCcEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCceEEEecCCCC-hhHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999986 555 8999999999 88999999999
Q ss_pred hhcCccccC
Q 028541 199 YIGGFDATR 207 (207)
Q Consensus 199 ~igG~~gtS 207 (207)
++||+++++
T Consensus 157 ~~GG~~~hr 165 (294)
T 3c2e_A 157 LVGGCDTHR 165 (294)
T ss_dssp HHTTCBCCC
T ss_pred HhCCCCcee
Confidence 999998765
No 14
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=99.59 E-value=3e-15 Score=130.91 Aligned_cols=124 Identities=17% Similarity=0.226 Sum_probs=108.3
Q ss_pred CCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCe
Q 028541 47 HDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGS 125 (207)
Q Consensus 47 ~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG~ 125 (207)
.+..++.+|+.|.. .|++|+..+.+.++.+. + .+++| ++++||+
T Consensus 51 ~~~~~~a~~~ar~~------gv~aG~~~~~~~f~~~~----------------------------~-~~~~v~~~~~dG~ 95 (296)
T 1qap_A 51 ADTQAHATVITRED------GVFCGKRWVEEVFIQLA----------------------------G-DDVRLTWHVDDGD 95 (296)
T ss_dssp TTCEECCEEEESSC------EECCCHHHHHHHHHHHH----------------------------T-TSSEEEESCCTTC
T ss_pred CCCeEEEEEEECCC------EEEECHHHHHHHHHhcC----------------------------C-CCeEEEEEcCCCC
Confidence 36789999999963 27899998887776420 0 14677 7899999
Q ss_pred eecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCccc
Q 028541 126 VVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDA 205 (207)
Q Consensus 126 lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~g 205 (207)
.++|++|+++|+||...+...|+.+|++|++.|.+||++++++.+++ +.++..|++|+.+ |.......|++++||+..
T Consensus 96 ~v~~g~~~~~v~G~~~~~l~~Er~aLn~l~~~SgIAT~t~~~v~~~~-gt~v~i~~tRkt~-P~~r~~e~~Av~~GG~~~ 173 (296)
T 1qap_A 96 AIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLA-GTQTQLLDTRKTL-PGLRTALKYAVLCGGGAN 173 (296)
T ss_dssp EECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TSSCEEECCSCCC-TTCHHHHHHHHHHHTCBC
T ss_pred EecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCCCC-cccHHHHHHHHHHCCchh
Confidence 99999999999999999999999999999999999999999999987 7889999999988 889999999999999987
Q ss_pred cC
Q 028541 206 TR 207 (207)
Q Consensus 206 tS 207 (207)
++
T Consensus 174 hr 175 (296)
T 1qap_A 174 HR 175 (296)
T ss_dssp CC
T ss_pred hc
Confidence 64
No 15
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=99.55 E-value=2.8e-14 Score=125.73 Aligned_cols=123 Identities=17% Similarity=0.160 Sum_probs=108.4
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
|.+..++.+++.|.. .|++|+..+.+.++.+ + .+++| ++++||
T Consensus 74 ~~~~~~~a~i~are~------gVlaG~~~a~~vf~~l-----------------------------d-~~~~v~~~~~dG 117 (320)
T 3paj_A 74 PADRISTATIITREA------GVFCGQLWADEVFKQL-----------------------------G-GQVSIEWHVQDG 117 (320)
T ss_dssp CTTCEEEEEEEESSC------EECCCHHHHHHHHHHT-----------------------------T-SCCEEEESSCTT
T ss_pred CCCCeEEEEEEECCC------ceEecHHHHHHHHHHc-----------------------------C-CCeEEEEEeCCC
Confidence 447889999999974 2889999988877752 0 13677 788999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.++|++|+++|+||.......|+.+|++|.+.|.+||++++++.+++ +.++..|+||+.+ |......-||.++||+.
T Consensus 118 ~~v~~g~~l~~v~G~a~~ll~~Er~aLN~L~~~SGIAT~t~~~v~aa~-g~~~~i~~TRKT~-PglR~l~kyAV~~GGg~ 195 (320)
T 3paj_A 118 DTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELK-GTQCRLLDTRKTI-PGLRSALKYAVACGGGY 195 (320)
T ss_dssp CEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSSCEEECCSCCC-TTCHHHHHHHHHHTTCB
T ss_pred CEecCCCEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeecCCC-ccchHHHhhhHHhcCcc
Confidence 999999999999999999999999999999999999999999999997 6889999999987 88888899999999987
Q ss_pred cc
Q 028541 205 AT 206 (207)
Q Consensus 205 gt 206 (207)
..
T Consensus 196 nH 197 (320)
T 3paj_A 196 NH 197 (320)
T ss_dssp CC
T ss_pred ce
Confidence 65
No 16
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=99.47 E-value=2.4e-13 Score=118.80 Aligned_cols=123 Identities=13% Similarity=0.133 Sum_probs=107.1
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
|.+..++.+++.|.. .|++|+.++.+.++.+ + . .++| ++++||
T Consensus 52 ~~~~~~~a~i~are~------gVlaG~~~a~~vf~~l--------------~---------------~-~~~v~~~~~dG 95 (298)
T 3gnn_A 52 PDGAPRRARVIVRED------AVLCGVPWFDAVVRAV--------------D---------------P-SIEVDWRHREG 95 (298)
T ss_dssp CCCSEEEEEEEECSC------EECCCHHHHHHHHHHH--------------C---------------T-TCEEEESSCTT
T ss_pred CCCceEEEEEEECCC------EEEEcHHHHHHHHHHc--------------C---------------C-CeEEEEEcCCC
Confidence 347789999999974 2889999988877742 1 1 3676 788999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.++|++|+++|+||.......|..+|++|.+.|.+||++++++.+++ +.++.-|+||+.+ |......-||.++||+.
T Consensus 96 ~~v~~g~~l~~v~G~a~~ll~~Er~aLN~L~~~SGIAT~t~~~v~a~~-g~~~~i~~TRKt~-Pglr~l~kyAv~~GGg~ 173 (298)
T 3gnn_A 96 DRMSADSTVCELRGPARALLTAERNALNFLQLLSGVASATRQYVDRIA-DTRARILDTRKTL-PGLRLAQKYAVRVGGGA 173 (298)
T ss_dssp CEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TSSCCEECCSCCC-TTCHHHHHHHHHHTTCC
T ss_pred CEecCCCEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEecCCC-cchHHHHHhhHHhcCcc
Confidence 999999999999999999999999999999999999999999999987 6788899999987 88888899999999987
Q ss_pred cc
Q 028541 205 AT 206 (207)
Q Consensus 205 gt 206 (207)
.+
T Consensus 174 nH 175 (298)
T 3gnn_A 174 NQ 175 (298)
T ss_dssp CC
T ss_pred ce
Confidence 54
No 17
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=99.25 E-value=4.3e-11 Score=104.05 Aligned_cols=123 Identities=14% Similarity=0.115 Sum_probs=105.8
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 46 ~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
|.+..++.+++.|.. + |++|+..+.+.++.+ + + .++| +.++||
T Consensus 41 ~~~~~~~a~i~are~----g--VlaG~~~a~~vf~~l--------------~---------------~-~~~v~~~~~dG 84 (287)
T 3tqv_A 41 AEDIDTTAFCITREE----M--ILCGQDFANEVINQL--------------D---------------K-NIQITWLYSDA 84 (287)
T ss_dssp SCSCEEEEEEEESSC----E--ECCCHHHHHHHHHHH--------------C---------------T-TCEEEESSCTT
T ss_pred CCCCeEEEEEEECCC----e--EEEcHHHHHHHHHHc--------------C---------------C-CeEEEEEeCCC
Confidence 447889999999974 2 789999988877742 1 1 2455 368999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.|++|+++|+||.......|..+|+++.+.|.+||.+++++.+++ +.++.-++||..+ |-.....-||..+||+.
T Consensus 85 ~~v~~g~~v~~i~G~a~~ll~~ER~aLN~L~~~SGIAT~t~~~v~~~~-g~~~~i~dTRKT~-PglR~l~kyAV~~GGg~ 162 (287)
T 3tqv_A 85 QKVPANARIFELKGNVRSILTAERTILNFIQMLSGTATVTNKLVKLIS-QYKTKLLDTRKTI-PGFRLAQKYAVRCGGGF 162 (287)
T ss_dssp CEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSSCEEECCSCCC-TTCHHHHHHHHHHTTCB
T ss_pred CEeeCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeecccC-cchHHHHHHHHHhcCch
Confidence 999999999999999999999999999999999999999999999987 6789999999988 77888889999999986
Q ss_pred cc
Q 028541 205 AT 206 (207)
Q Consensus 205 gt 206 (207)
.+
T Consensus 163 nH 164 (287)
T 3tqv_A 163 NH 164 (287)
T ss_dssp CC
T ss_pred he
Confidence 54
No 18
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=99.19 E-value=1.2e-10 Score=101.22 Aligned_cols=137 Identities=19% Similarity=0.121 Sum_probs=111.4
Q ss_pred hhhhHH--HHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHH
Q 028541 28 LLNDLY--QFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFF 105 (207)
Q Consensus 28 LlTD~Y--kltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl 105 (207)
|.=|+- -+|.... .|.+..++.+++.|.. .|++|+.++.+.++.+
T Consensus 22 l~ED~~~gD~Tt~~~----~~~~~~~~a~~~ar~~------gv~aG~~~~~~~f~~~----------------------- 68 (286)
T 1x1o_A 22 LREDLGQGDLTSLLV----VPEDLEGEAVILAKEG------GVLAGLWVAERVFALA----------------------- 68 (286)
T ss_dssp HHHHHTTCCHHHHHH----SCTTCEEEEEEEESSC------EECCCHHHHHHHHHHH-----------------------
T ss_pred HHhcCCCCCccchhh----cCCCCeEEEEEEECCC------EEEECHHHHHHHHHHc-----------------------
Confidence 446643 3554332 2447889999999963 2889999988877742
Q ss_pred HHHhcCCCCceEE-EEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCC
Q 028541 106 DYLRGINCSDVEV-HAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRR 184 (207)
Q Consensus 106 ~~L~~~~~~~v~I-~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr 184 (207)
++ .++| +.++||+.+.+++|+++|+||.......|..+|+++.+.|.+||++++++.++. +.++.-++||.
T Consensus 69 ------~~-~~~v~~~~~dG~~v~~g~~v~~i~G~~~~ll~~Er~aLn~l~~~SGIAT~t~~~v~~~~-~~~~~i~~TRK 140 (286)
T 1x1o_A 69 ------DP-RTAFTPLVAEGARVAEGTEVARVRGPLRGILAGERLALNLLQRLSGIATLTRAYVEALA-GTKAQILDTRK 140 (286)
T ss_dssp ------CT-TCEEEESSCTTCEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TSSCEEECCSC
T ss_pred ------CC-CEEEEEEcCCCCCccCCCEEEEEEEcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc-CCCcEEEEcCC
Confidence 12 2677 478999999999999999999999999999999999999999999999999986 56788999998
Q ss_pred CCCcchHHHHHHHHhhcCcccc
Q 028541 185 AQGPDGGIGASKYCYIGGFDAT 206 (207)
Q Consensus 185 ~~~~~~~~~~~raa~igG~~gt 206 (207)
.+ |-.....-||..+||....
T Consensus 141 t~-Pglr~~~kyAv~~GGg~nH 161 (286)
T 1x1o_A 141 TT-PGLRALEKYAVRVGGGRNH 161 (286)
T ss_dssp CC-TTCHHHHHHHHHHHTCBCC
T ss_pred CC-hhhHHHHHHHHHhCCCccc
Confidence 76 7778888899999997654
No 19
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=99.12 E-value=5.6e-10 Score=96.97 Aligned_cols=122 Identities=17% Similarity=0.139 Sum_probs=104.5
Q ss_pred CCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhc-CCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028541 47 HDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIAN-FKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (207)
Q Consensus 47 ~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~-l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG 124 (207)
.+..++.+|+.|.. .|++|+.++.+.++. +. ++ +++| +.++||
T Consensus 36 ~~~~~~a~~~ar~~------gv~aG~~~~~~~f~~~~~----------------------------~~-~~~v~~~~~dG 80 (284)
T 1qpo_A 36 ASATTTASLVTREA------GVVAGLDVALLTLNEVLG----------------------------TN-GYRVLDRVEDG 80 (284)
T ss_dssp TTCEEEEEEEESSC------EECCCHHHHHHHHHHHHC----------------------------TT-SEEEEEECCTT
T ss_pred CCCeEEEEEEECCC------EEEECHHHHHHHHHHhCC----------------------------CC-CEEEEEEcCCC
Confidence 36789999999963 278999998887763 20 01 3677 478999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcc
Q 028541 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFD 204 (207)
Q Consensus 125 ~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~ 204 (207)
+.+.|++|+++|+||.......|..+|+++.+.|.+||+++++..+++ +.++.=++||..+ |......-+|..+||..
T Consensus 81 ~~v~~g~~v~~i~G~~~~ll~~Er~~Ln~l~~~SGIAT~t~~~v~~~~-g~~~~i~~tRKt~-Pglr~l~k~Av~~GG~~ 158 (284)
T 1qpo_A 81 ARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVR-GTKAKIRDTRKTL-PGLRALQKYAVRTGGGV 158 (284)
T ss_dssp CEECTTCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TSSCEEECCSCCC-TTCHHHHHHHHHHTTCB
T ss_pred CEecCCcEEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEecccC-CCchHHHhhhhhhcCcc
Confidence 999999999999999999999999999999999999999999999987 7788999999987 77788888999999975
Q ss_pred c
Q 028541 205 A 205 (207)
Q Consensus 205 g 205 (207)
.
T Consensus 159 n 159 (284)
T 1qpo_A 159 N 159 (284)
T ss_dssp C
T ss_pred c
Confidence 4
No 20
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=99.11 E-value=3.9e-10 Score=98.01 Aligned_cols=118 Identities=16% Similarity=0.166 Sum_probs=100.7
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCee
Q 028541 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSV 126 (207)
Q Consensus 48 ~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~~~v~I-~a~~EG~l 126 (207)
+..++.+|+.|..| + |++|+.++.+.++.+ +++| +.++||+.
T Consensus 40 ~~~~~a~~~ar~~p---g--v~aG~~~~~~~f~~~--------------------------------~~~v~~~~~dG~~ 82 (285)
T 1o4u_A 40 NTTAGAHLLLKTEN---V--VASGIEVSRMFLEKM--------------------------------GLLSKFNVEDGEY 82 (285)
T ss_dssp TCEEEEEEEECCSE---E--ECCSHHHHHHHHHHT--------------------------------TCEEEESCCTTCE
T ss_pred CCeEEEEEEEcCCC---e--EEEcHHHHHHHHHHc--------------------------------CCEEEEEcCCCCC
Confidence 67899999999754 3 789999998888752 2566 47899999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccCCCCCCcchHHHHHHHHhhcCcccc
Q 028541 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDAT 206 (207)
Q Consensus 127 v~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGtRr~~~~~~~~~~~raa~igG~~gt 206 (207)
+.+++|+++|+||.......|..+|+++.+.|.+||.+++++.+++ + +.=++||..+ |-.....-||..+||+...
T Consensus 83 v~~g~~v~~i~G~~~~ll~~Er~aLn~l~~~SGIAT~t~~~v~~~~-~--~~i~~TRKt~-Pglr~~~kyAv~~GGg~nH 158 (285)
T 1o4u_A 83 LEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLK-H--AKIAATRKIL-PGLGVLQKIAVVHGGGDPH 158 (285)
T ss_dssp EESCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-S--SEEECCSCCC-TTTHHHHHHHHHHHTCC--
T ss_pred cCCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C--CEEeecCCCC-hhhHHHHHHHHHhCCCCCc
Confidence 9999999999999999999999999999999999999999999987 4 4566999987 7777778899999998654
No 21
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=99.04 E-value=1.7e-09 Score=94.33 Aligned_cols=136 Identities=17% Similarity=0.123 Sum_probs=110.7
Q ss_pred hhhhhHH---HHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChh
Q 028541 27 PLLNDLY---QFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDG 103 (207)
Q Consensus 27 ~LlTD~Y---kltm~~~~~~~~~~~~~v~f~~~~R~~~~~~~~~v~~gl~~~i~~L~~l~ft~eei~~L~~~~~~~f~~~ 103 (207)
.|.=|+- -+|.... .|.+. ++..++.|..- |++|+..+.+.++.+-
T Consensus 33 ~L~ED~g~~gD~tt~~l----~~~~~-~~a~i~are~g------VlaG~~~a~~vf~~l~-------------------- 81 (300)
T 3l0g_A 33 ALKEDLGDKGDITTNSI----LINEK-VNFAINTRENL------VVCGIPILEEVFNMNK-------------------- 81 (300)
T ss_dssp HHHHHHTTTCCHHHHHH----CSSCE-EEEEEEESSCE------ECCCHHHHHHHHHHTT--------------------
T ss_pred HHHhhCCCCCCcchhhc----ccCCc-EEEEEEECCCe------EEEcHHHHHHHHHHcC--------------------
Confidence 3557774 3565433 35456 99999999742 7899999888777421
Q ss_pred HHHHHhcCCCCceEE-EEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhCCCCcEeeccC
Q 028541 104 FFDYLRGINCSDVEV-HAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGL 182 (207)
Q Consensus 104 fl~~L~~~~~~~v~I-~a~~EG~lv~~~eP~i~IeG~~~~~~l~Et~lL~ii~~~~~~AT~a~r~~~~a~~~~~~~dFGt 182 (207)
+ .++| +.++||+.+.+++++++|+||.......|..+|+++.+.|.+||.+++++.+++ +.++.-++|
T Consensus 82 ---------~-~~~v~~~~~dG~~v~~g~~v~~i~G~a~~ll~~ER~aLN~L~~~SGIAT~T~~~v~~~~-~~~~~i~dT 150 (300)
T 3l0g_A 82 ---------E-HVKYEIHKKDGDITGKNSTLVSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVS-GTKVKIRST 150 (300)
T ss_dssp ---------T-TEEEEECCCTTCEECSSCEEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTT-TSSCEEECC
T ss_pred ---------C-CeEEEEEeCCCCEeeCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEeec
Confidence 1 2555 367999999999999999999999999999999999999999999999999987 678899999
Q ss_pred CCCCCcchHHHHHHHHhhcCccc
Q 028541 183 RRAQGPDGGIGASKYCYIGGFDA 205 (207)
Q Consensus 183 Rr~~~~~~~~~~~raa~igG~~g 205 (207)
|..+ |-.-...-||..+||+..
T Consensus 151 RKT~-PGlR~lekyAV~~GGg~n 172 (300)
T 3l0g_A 151 RKTT-PGLRMLDKYSVCIGGGES 172 (300)
T ss_dssp SCCC-TTCHHHHHHHHHHTTCBC
T ss_pred CccC-hhhhHHHHHHHHhcCCcc
Confidence 9987 767777888999999764
No 22
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=36.72 E-value=51 Score=19.86 Aligned_cols=26 Identities=15% Similarity=0.254 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHhh
Q 028541 70 AGLEECIRFIANFKLTEEEITFVRDS 95 (207)
Q Consensus 70 ~gl~~~i~~L~~l~ft~eei~~L~~~ 95 (207)
+.++..++.|..-.|++||+..|++.
T Consensus 3 aalkselqalkkegfspeelaalese 28 (48)
T 1g6u_A 3 AALKSELQALKKEGFSPEELAALESE 28 (48)
T ss_dssp HHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 67888889898889999999888765
No 23
>2prv_A Uncharacterized protein YOBK; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacillus subtilis} SCOP: d.369.1.1
Probab=33.98 E-value=52 Score=24.53 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcC-----CCCHHHHHHHHhhCCCCCChhHHHHHhcCCC
Q 028541 70 AGLEECIRFIANF-----KLTEEEITFVRDSLPGSCEDGFFDYLRGINC 113 (207)
Q Consensus 70 ~gl~~~i~~L~~l-----~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~ 113 (207)
..++.+|+.+... ..|+++|..+++.++--|+++|.+||+.+.+
T Consensus 5 ~~i~~li~~~~~~~~~~~~~see~I~~~E~~Lgi~lP~dYk~fLk~~ng 53 (153)
T 2prv_A 5 SKVENFINENKQNAIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGA 53 (153)
T ss_dssp HHHHHHHHHHGGGCEECCCCCHHHHHHHHHHHTSCCCHHHHHHHHHHCS
T ss_pred HHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHhCC
Confidence 5566777765532 3789999999987664699999999998765
No 24
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=32.26 E-value=30 Score=25.75 Aligned_cols=28 Identities=14% Similarity=0.163 Sum_probs=23.8
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhcC
Q 028541 84 LTEEEITFVRDSLPGSCEDGFFDYLRGI 111 (207)
Q Consensus 84 ft~eei~~L~~~~~~~f~~~fl~~L~~~ 111 (207)
.|+++|..+++.++--|+++|.++|+.+
T Consensus 22 ~t~e~I~~~E~~Lgi~fP~dYk~fl~~~ 49 (135)
T 2pag_A 22 PDEDQLVEIEEQLFINIPFVFKEFLLTV 49 (135)
T ss_dssp CCHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHC
Confidence 5899999999876646999999999974
No 25
>2icg_A LIN2918 protein; hypothetical protein, structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 1.65A {Listeria innocua} SCOP: d.369.1.1
Probab=23.68 E-value=61 Score=24.19 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=25.8
Q ss_pred CCCHHHHHHHHhhCCCCCChhHHHHHhcCCC
Q 028541 83 KLTEEEITFVRDSLPGSCEDGFFDYLRGINC 113 (207)
Q Consensus 83 ~ft~eei~~L~~~~~~~f~~~fl~~L~~~~~ 113 (207)
..|+++|..+++.++--|+++|.+||+.+..
T Consensus 26 ~~s~~~I~~~E~~Lgi~lP~~Yk~fL~~~~g 56 (160)
T 2icg_A 26 TGTPELIKIYQDALGNEFPETYKLFLEKYGT 56 (160)
T ss_dssp CCCHHHHHHHHHHHTCCCCHHHHHHHHHTSS
T ss_pred CCCHHHHHHHHHHhCCCCCHHHHHHHHHhCC
Confidence 4678999999987664699999999998764
No 26
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=20.30 E-value=1.6e+02 Score=25.59 Aligned_cols=30 Identities=10% Similarity=0.143 Sum_probs=23.0
Q ss_pred eeCCeeecCCccEEEEEec---cchhHHHHHHH
Q 028541 121 ITEGSVVFPKVPLLRVEGP---VAVVQLLETPF 150 (207)
Q Consensus 121 ~~EG~lv~~~eP~i~IeG~---~~~~~l~Et~l 150 (207)
+.+|+.+.+++|+++|..+ |..+.+.|.-+
T Consensus 223 v~~G~~V~~G~~l~~I~~~~~l~v~~~v~e~~~ 255 (413)
T 3ne5_B 223 LRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIA 255 (413)
T ss_dssp CCTTCEECTTSCSEEEEEEEEEEEEEEEEGGGH
T ss_pred cCCCCEECCCCcEEEEeCCCeEEEEEEECHHHH
Confidence 5689999999999999865 55666666553
Done!