BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028543
MRVAGAATLISIPLKPSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILL
FDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPF
DLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTF
CSCVIGMFSKQCLKERGNLILIFIRKS

High Scoring Gene Products

Symbol, full name Information P value
FHY1
AT1G79790 		protein from Arabidopsis thaliana 7.5e-57

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028543
        (207 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019873 - symbol:FHY1 "flavin mononucleotide h...   585  7.5e-57   1


>TAIR|locus:2019873 [details] [associations]
            symbol:FHY1 "flavin mononucleotide hydrolase 1"
            species:3702 "Arabidopsis thaliana" [GO:0016787 "hydrolase
            activity" evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR006402 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0009507 Gene3D:3.40.50.1000 InterPro:IPR023214
            SUPFAM:SSF56784 GO:GO:0016787 eggNOG:COG1011 Pfam:PF13419
            TIGRFAMs:TIGR01509 EMBL:BT004602 EMBL:AK227909 IPI:IPI00518225
            RefSeq:NP_565221.1 UniGene:At.34045 ProteinModelPortal:Q84VZ1
            SMR:Q84VZ1 STRING:Q84VZ1 PaxDb:Q84VZ1 PRIDE:Q84VZ1
            EnsemblPlants:AT1G79790.1 GeneID:844318 KEGG:ath:AT1G79790
            TAIR:At1g79790 HOGENOM:HOG000006101 InParanoid:Q84VZ1 OMA:PDFYLEV
            PhylomeDB:Q84VZ1 ProtClustDB:CLSN2689334 Genevestigator:Q84VZ1
            Uniprot:Q84VZ1
        Length = 245

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 105/145 (72%), Positives = 120/145 (82%)

Query:    43 MASLSGKE-NEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEM 101
             + S SG E + KRKLPILLFD+MDTIVRDPFY DVPAFFGM MK+L+ECKHP  WIEFE 
Sbjct:    33 LGSSSGDEISRKRKLPILLFDVMDTIVRDPFYQDVPAFFGMPMKQLLECKHPMVWIEFEK 92

Query:   102 GMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPI 161
             G+I E ELAR FF DGR FDLEGLK CM+ GY+YLDG++ELL  L   ++E+HAFTNYPI
Sbjct:    93 GLIDEEELARNFFIDGRDFDLEGLKECMRSGYSYLDGMQELLQTLAADDFEIHAFTNYPI 152

Query:   162 WYEIIEDKLKISTYLSWTFCSCVIG 186
             WY IIEDKLK+S YLSWTFCSC+ G
Sbjct:   153 WYNIIEDKLKLSAYLSWTFCSCIAG 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      207       195   0.00078  111 3  11 22  0.40    32
                                                     31  0.44    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  180 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.16u 0.12s 17.28t   Elapsed:  00:00:01
  Total cpu time:  17.16u 0.12s 17.28t   Elapsed:  00:00:01
  Start:  Sat May 11 01:01:14 2013   End:  Sat May 11 01:01:15 2013

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