BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028546
(207 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224083679|ref|XP_002307084.1| predicted protein [Populus trichocarpa]
gi|222856533|gb|EEE94080.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/207 (97%), Positives = 206/207 (99%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTS+WIEEVRTERGGDVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGGDVIVVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGDGKA+EFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDGKAREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKPTVNSSQ EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPTVNSSQAEQQGGGCAC 207
>gi|255580884|ref|XP_002531261.1| protein with unknown function [Ricinus communis]
gi|223529146|gb|EEF31125.1| protein with unknown function [Ricinus communis]
Length = 207
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/207 (96%), Positives = 204/207 (98%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTS+WIEEVRTERG DVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEEVRTERGSDVIVVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD KAKEFGVMFIETSAKAGFNIKPLFRKIA+ALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKAKEFGVMFIETSAKAGFNIKPLFRKIASALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKP+VNSSQ EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPSVNSSQNEQQGGGCAC 207
>gi|356512701|ref|XP_003525055.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/207 (95%), Positives = 205/207 (99%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNT++W+EEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD K++EFG+MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKPTVNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207
>gi|356525473|ref|XP_003531349.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/207 (94%), Positives = 205/207 (99%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNT++W+EEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGD K++EFG+MFIETSAKAGFNIKPLFRKIAAALPGME+LSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGMESLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKPTVNSSQTEQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQTEQQGGGCSC 207
>gi|449451431|ref|XP_004143465.1| PREDICTED: ras-related protein RABH1e-like [Cucumis sativus]
gi|449496434|ref|XP_004160133.1| PREDICTED: ras-related protein RABH1e-like [Cucumis sativus]
Length = 207
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/207 (93%), Positives = 204/207 (98%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT++WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTTKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGD K++EFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST+
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSREFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTR 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKP VNSSQ+EQQGGGCAC
Sbjct: 181 QEDMVDVNLKPAVNSSQSEQQGGGCAC 207
>gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis]
Length = 207
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/207 (94%), Positives = 201/207 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVANRQSFLNT+RWIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD KA+EFGVMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKAREFGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKPTVNSSQ EQ+ GGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQAEQKAGGCSC 207
>gi|359497196|ref|XP_002271220.2| PREDICTED: ras-related protein RABH1e-like [Vitis vinifera]
Length = 207
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/207 (94%), Positives = 202/207 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAVVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDV NRQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVGNRQSFLNTSKWIEEVRTERGTDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD K+++FGVMFIETSAKAGFNIKPLFRKIA+ALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDTKSRDFGVMFIETSAKAGFNIKPLFRKIASALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKP+VNSSQTEQQGGGCAC
Sbjct: 181 QEDMVDVNLKPSVNSSQTEQQGGGCAC 207
>gi|356567704|ref|XP_003552057.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 207
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/207 (92%), Positives = 201/207 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD YQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDINYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVANRQSFLNT++WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTNKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGD K++E G+MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSRESGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLKPTVNSSQ EQQGGGC+C
Sbjct: 181 QEDMVDVNLKPTVNSSQAEQQGGGCSC 207
>gi|297807057|ref|XP_002871412.1| hypothetical protein ARALYDRAFT_487852 [Arabidopsis lyrata subsp.
lyrata]
gi|297317249|gb|EFH47671.1| hypothetical protein ARALYDRAFT_487852 [Arabidopsis lyrata subsp.
lyrata]
Length = 207
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/207 (93%), Positives = 201/207 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTS+WIE+VRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD KA+++GV+FIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLK + NSSQ EQQ GGC+C
Sbjct: 181 QEDMVDVNLKTSTNSSQGEQQRGGCSC 207
>gi|145357850|ref|NP_196588.3| RAB GTPase H1E [Arabidopsis thaliana]
gi|75334962|sp|Q9LFT9.1|RAH1E_ARATH RecName: Full=Ras-related protein RABH1e; Short=AtRABH1e
gi|8953407|emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana]
gi|332004131|gb|AED91514.1| RAB GTPase H1E [Arabidopsis thaliana]
Length = 207
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/207 (93%), Positives = 201/207 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTS+WIE+VRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD KA+++GV+FIETSAKAGFNIKPLFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLK + NS+Q EQQ GGCAC
Sbjct: 181 QEDMVDVNLKTSSNSAQGEQQRGGCAC 207
>gi|356538150|ref|XP_003537567.1| PREDICTED: ras-related protein RABH1e-like [Glycine max]
Length = 233
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/202 (94%), Positives = 198/202 (98%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
PLAKYKLVFLGDQSVGKTSIITRFMYDKFDT YQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 32 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTNYQATIGIDFLSKTMYLEDRTVRLQLWDT 91
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNT++WIEEVRTERG DVIIVLVGNKTD
Sbjct: 92 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWIEEVRTERGSDVIIVLVGNKTD 151
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
LV+KRQVSIEEGD K++E G+MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV
Sbjct: 152 LVEKRQVSIEEGDAKSRESGIMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 211
Query: 186 DVNLKPTVNSSQTEQQGGGCAC 207
DVNLKPTVNSSQTEQQGGGC+C
Sbjct: 212 DVNLKPTVNSSQTEQQGGGCSC 233
>gi|388512653|gb|AFK44388.1| unknown [Medicago truncatula]
Length = 207
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/207 (91%), Positives = 201/207 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGD+SVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDRSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNT++W+EEVR ERG DVIIVLV
Sbjct: 61 QPWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRQERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGD K+KEFG+MFIETSAKAGFNIKPLFRKIA+ALPGMETLSST
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSKEFGIMFIETSAKAGFNIKPLFRKIASALPGMETLSSTN 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+EDMVDVNLKPTV+SS TEQQGGGC+C
Sbjct: 181 KEDMVDVNLKPTVHSSNTEQQGGGCSC 207
>gi|297821449|ref|XP_002878607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324446|gb|EFH54866.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 207
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/207 (91%), Positives = 199/207 (96%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVANR SFLNTS+WIEEVRTER GDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRTERAGDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGD K +E+GVMFIETSAKAGFNIKPLFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
EDMVDVNLKPT NSSQ +QQGGGC+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGGCSC 207
>gi|15227173|ref|NP_179816.1| RAB GTPase-like protein H1D [Arabidopsis thaliana]
gi|75337262|sp|Q9SID8.1|RAH1D_ARATH RecName: Full=Ras-related protein RABH1d; Short=AtRABH1d
gi|4567198|gb|AAD23614.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|330252194|gb|AEC07288.1| RAB GTPase-like protein H1D [Arabidopsis thaliana]
Length = 207
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/207 (90%), Positives = 197/207 (95%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVANR SFLNTS+WIEEVR ER GDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEGD K +E+GVMFIETSAKAGFNIKPLFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
EDMVDVNLKPT NSSQ +QQGG C+C
Sbjct: 181 NEDMVDVNLKPTSNSSQGDQQGGACSC 207
>gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekinensis]
Length = 206
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/207 (88%), Positives = 200/207 (96%), Gaps = 1/207 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+V+PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMY+EDRT+RL
Sbjct: 1 MAAVTPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYMEDRTLRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTS+WIE+VRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD KA++FGV+FIETSAKAGFNIKPLFRKI+AALPGM+TL ST+
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDFGVIFIETSAKAGFNIKPLFRKISAALPGMDTL-STR 179
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
Q DMVDVNL+ + N+SQ EQQGGGC+C
Sbjct: 180 QGDMVDVNLRSSTNASQGEQQGGGCSC 206
>gi|357116841|ref|XP_003560185.1| PREDICTED: ras-related protein RABH1b-like [Brachypodium
distachyon]
Length = 293
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/208 (89%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 86 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 145
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 146 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 205
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+GKAK+ GVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 206 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 265
Query: 181 QEDMVDVNLKP-TVNSSQTEQQGGGCAC 207
QEDMVDVNLK NSSQ++ Q GGC+C
Sbjct: 266 QEDMVDVNLKSGNANSSQSQAQAGGCSC 293
>gi|226501020|ref|NP_001150271.1| ras-related protein Rab-6A [Zea mays]
gi|242045718|ref|XP_002460730.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|194701460|gb|ACF84814.1| unknown [Zea mays]
gi|195637990|gb|ACG38463.1| ras-related protein Rab-6A [Zea mays]
gi|241924107|gb|EER97251.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|414590332|tpg|DAA40903.1| TPA: Ras protein Rab-6A [Zea mays]
Length = 208
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/208 (89%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+GKAK+ GVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKP-TVNSSQTEQQGGGCAC 207
QEDMVDVNL+ NSSQ++ Q GGC+C
Sbjct: 181 QEDMVDVNLRSGNANSSQSQAQAGGCSC 208
>gi|255571107|ref|XP_002526504.1| protein with unknown function [Ricinus communis]
gi|223534179|gb|EEF35895.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/208 (89%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+ KA++ VMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPT-VNSSQTEQQGGGCAC 207
QEDMVDVNLK + N+SQ++ Q GGCAC
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQSGGCAC 208
>gi|224067425|ref|XP_002302484.1| predicted protein [Populus trichocarpa]
gi|222844210|gb|EEE81757.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/208 (88%), Positives = 196/208 (94%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WIEEVR+ERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+ KA++ VMFIETSAKAGFNIK LFRKIAAALPGMETLSS+K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSK 180
Query: 181 QEDMVDVNLKPT-VNSSQTEQQGGGCAC 207
QEDMVDVNLK + N+SQ++QQ GGCAC
Sbjct: 181 QEDMVDVNLKSSNANASQSQQQSGGCAC 208
>gi|226498830|ref|NP_001142363.1| hypothetical protein [Zea mays]
gi|194708444|gb|ACF88306.1| unknown [Zea mays]
gi|414886777|tpg|DAA62791.1| TPA: hypothetical protein ZEAMMB73_332722 [Zea mays]
Length = 208
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/208 (88%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WI+EVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+GKAK+ GVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKP-TVNSSQTEQQGGGCAC 207
QEDMVDVNL+ NSSQ++ Q GGC+C
Sbjct: 181 QEDMVDVNLRSGNANSSQSQAQAGGCSC 208
>gi|623586|gb|AAA74117.1| putative [Nicotiana tabacum]
Length = 208
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/208 (88%), Positives = 193/208 (92%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTV L
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVAL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEE + KA+E VMFIETSAKAGFNIKPLFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEAEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKPT-VNSSQTEQQGGGCAC 207
QEDMVDVNLK + N+SQ++ Q GGCAC
Sbjct: 181 QEDMVDVNLKSSNANASQSQAQSGGCAC 208
>gi|414886776|tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, partial [Zea mays]
Length = 249
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/208 (88%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WI+EVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+GKAK+ GVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKP-TVNSSQTEQQGGGCAC 207
QEDMVDVNL+ NSSQ++ Q GGC+C
Sbjct: 181 QEDMVDVNLRSGNANSSQSQAQAGGCSC 208
>gi|224126375|ref|XP_002329538.1| predicted protein [Populus trichocarpa]
gi|222870247|gb|EEF07378.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/208 (88%), Positives = 193/208 (92%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KA+E VMFIETSAKAGFNIKPLFRKIAAALPGME LSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMEALSSTK 180
Query: 181 QEDMVDVNLKPTVNS-SQTEQQGGGCAC 207
QEDMVDVNLK T S SQ + Q GGCAC
Sbjct: 181 QEDMVDVNLKSTGGSASQNQAQSGGCAC 208
>gi|168014471|ref|XP_001759775.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162688905|gb|EDQ75279.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 211
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/206 (88%), Positives = 197/206 (95%), Gaps = 2/206 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 8 ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 67
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSF+NT+RW+EEVRTERG DVII+LVG
Sbjct: 68 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFMNTARWVEEVRTERGSDVIIMLVG 127
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLVDKRQVSIEEGD KAKEFGVMFIETS+KAGFNIK LFRKIAAALPGMET+SS K
Sbjct: 128 NKTDLVDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAALPGMETMSSHK- 186
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+D+VDVNLKPT+N +QTE + GGCAC
Sbjct: 187 DDLVDVNLKPTLN-TQTEGKPGGCAC 211
>gi|225453266|ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
Length = 208
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/208 (87%), Positives = 194/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQSFLNT++WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+ KA++ VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKPT-VNSSQTEQQGGGCAC 207
QEDMVDVNLK + N+SQ++ Q GGC+C
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQAGGCSC 208
>gi|356497062|ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 207
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/207 (87%), Positives = 192/207 (92%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNT++WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KA+E VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNLK T S+Q++ Q GCAC
Sbjct: 181 QEDMVDVNLKSTTGSAQSQPQPSGCAC 207
>gi|15224916|ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|297828175|ref|XP_002881970.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|75318653|sp|O80501.1|RAH1B_ARATH RecName: Full=Ras-related protein RABH1b; Short=AtRABH1b; AltName:
Full=Ras-related protein Rab6A; Short=AtRab6A
gi|3341681|gb|AAC27463.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|21593488|gb|AAM65455.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis thaliana]
gi|110742258|dbj|BAE99055.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|297327809|gb|EFH58229.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|330255353|gb|AEC10447.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|741994|prf||2008312A GTP-binding protein
Length = 208
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/208 (87%), Positives = 193/208 (92%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQSFLNT++WI+EVRTERG DVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEE + KA+E VMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPT-VNSSQTEQQGGGCAC 207
QEDMVDVNLK + N+S +QQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208
>gi|302769738|ref|XP_002968288.1| rab family GTPase [Selaginella moellendorffii]
gi|302788640|ref|XP_002976089.1| rab family GTPase [Selaginella moellendorffii]
gi|300156365|gb|EFJ22994.1| rab family GTPase [Selaginella moellendorffii]
gi|300163932|gb|EFJ30542.1| rab family GTPase [Selaginella moellendorffii]
Length = 209
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/206 (88%), Positives = 192/206 (93%), Gaps = 2/206 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 6 ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 65
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDVANRQSFLNT+RW+EEVRTERG DVIIVLVG
Sbjct: 66 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTARWVEEVRTERGSDVIIVLVG 125
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLVDKRQVSIEEGD KA+EFGVM+IETSAKAGFNIK LFRKIAAALPGME LSS KQ
Sbjct: 126 NKTDLVDKRQVSIEEGDAKAREFGVMYIETSAKAGFNIKALFRKIAAALPGMEALSSAKQ 185
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
ED+VDV+LK N +E + GGCAC
Sbjct: 186 EDLVDVSLK--TNPPPSETKAGGCAC 209
>gi|255575776|ref|XP_002528787.1| protein with unknown function [Ricinus communis]
gi|223531790|gb|EEF33609.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/208 (87%), Positives = 194/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQ+FLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KA++ VMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTV-NSSQTEQQGGGCAC 207
QEDMVDVNLK T +SQ++ Q GGCAC
Sbjct: 181 QEDMVDVNLKSTSKTASQSQAQSGGCAC 208
>gi|72255617|gb|AAZ66935.1| 117M18_16 [Brassica rapa]
Length = 216
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 199/216 (92%), Gaps = 9/216 (4%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+V+PLAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAAVTPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTLRL 60
Query: 61 QL--W-------DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTER 111
QL W DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTS+W+E+VRTER
Sbjct: 61 QLCLWCLICAFQDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWVEDVRTER 120
Query: 112 GGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
G DVIIVLVGNKTDLVDKRQVSIEEGD KA++FGV+FIETSAKAGFNIKPLFRKI+AALP
Sbjct: 121 GNDVIIVLVGNKTDLVDKRQVSIEEGDNKARDFGVIFIETSAKAGFNIKPLFRKISAALP 180
Query: 172 GMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
GM+TLSS KQ DMVDVNLK + +SSQ EQQ GGC+C
Sbjct: 181 GMDTLSSAKQGDMVDVNLKSSNHSSQAEQQSGGCSC 216
>gi|168066679|ref|XP_001785261.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162663131|gb|EDQ49913.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/205 (88%), Positives = 192/205 (93%), Gaps = 2/205 (0%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 11 TVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 70
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT+RW+EEVRTERG DVII+LVGN
Sbjct: 71 WDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWVEEVRTERGSDVIIMLVGN 130
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLVDKRQVSIEEGD KAKEFGVMFIETS+KAGFNIK LFRKIAAALPGME LSS K +
Sbjct: 131 KTDLVDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAALPGMEALSSHK-D 189
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
D+VDVNLKPT N Q E + GGCAC
Sbjct: 190 DLVDVNLKPTTN-PQAEGKAGGCAC 213
>gi|449461547|ref|XP_004148503.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
gi|449528471|ref|XP_004171228.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
Length = 208
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/208 (87%), Positives = 192/208 (92%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KA+E VMFIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPT-VNSSQTEQQGGGCAC 207
QEDMVDVNLK T ++Q++ Q GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
>gi|168061935|ref|XP_001782940.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162665558|gb|EDQ52238.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/206 (88%), Positives = 191/206 (92%), Gaps = 2/206 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 10 ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 69
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNTSRWIEEV TERG DVII+LVG
Sbjct: 70 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSRWIEEVLTERGSDVIIMLVG 129
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLVDKRQVSIEEGD KAKE GVMFIETS+KAGFNIK LFRKIAAALPGME LSS K
Sbjct: 130 NKTDLVDKRQVSIEEGDAKAKEVGVMFIETSSKAGFNIKALFRKIAAALPGMEALSSHK- 188
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+D+VDVNLKPT N Q E + GGCAC
Sbjct: 189 DDLVDVNLKPTTN-PQGEGKAGGCAC 213
>gi|356497064|ref|XP_003517384.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 206
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/207 (86%), Positives = 190/207 (91%), Gaps = 1/207 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVI YDVA+RQ+FLNTS+WIEEVR+ERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIAYDVASRQTFLNTSKWIEEVRSERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVS EEG+ K++E VMFIE SAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNL+ + Q++ Q GGCAC
Sbjct: 181 QEDMVDVNLRSS-GGYQSQPQSGGCAC 206
>gi|356541335|ref|XP_003539133.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 236
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/202 (88%), Positives = 189/202 (93%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNT++WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KA+E VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQG 202
QEDMVDVNLK T S+Q++ Q
Sbjct: 181 QEDMVDVNLKSTNGSAQSQPQS 202
>gi|168062328|ref|XP_001783133.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665383|gb|EDQ52070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 209
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 176/205 (85%), Positives = 192/205 (93%), Gaps = 2/205 (0%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
+VSPLAKYKLVFLGDQSVGKTS+ITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 7 TVSPLAKYKLVFLGDQSVGKTSVITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 66
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT+RW+EEVRTERG DVII+LVGN
Sbjct: 67 WDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWVEEVRTERGSDVIIMLVGN 126
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL+DKRQVSIEEGD KAKEFGVMFIETS+KAGFNIK LFRKIAAALPGME LSS+K +
Sbjct: 127 KTDLLDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAALPGMEALSSSK-D 185
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
D+VDVNLK T N +Q + + G C+C
Sbjct: 186 DLVDVNLKSTSN-AQADSKAGACSC 209
>gi|255640576|gb|ACU20573.1| unknown [Glycine max]
Length = 213
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/202 (88%), Positives = 189/202 (93%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNT++WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KA+E VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQG 202
QEDMVDVNLK T S+Q++ Q
Sbjct: 181 QEDMVDVNLKSTNGSAQSQPQS 202
>gi|242046344|ref|XP_002461043.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
gi|241924420|gb|EER97564.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
Length = 209
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/207 (89%), Positives = 194/207 (93%), Gaps = 2/207 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 4 AVVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNTS+WI+EVRTERGGDVIIVLVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSKWIDEVRTERGGDVIIVLVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLVDKRQVS EEG+ KAKE VMFIETSAKAGFNIKPLFRKIAAALPGMETLS+ K
Sbjct: 124 NKTDLVDKRQVSTEEGESKAKELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSA-KS 182
Query: 182 EDMVDVNLKPTVNSSQTEQQGG-GCAC 207
EDMVDVNLKPT + S ++QQ G GCAC
Sbjct: 183 EDMVDVNLKPTSSQSNSQQQAGSGCAC 209
>gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6 [Oryza sativa Japonica Group]
gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa Japonica Group]
Length = 208
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/208 (89%), Positives = 195/208 (93%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEG+GKAK+ GVMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLK-PTVNSSQTEQQGGGCAC 207
QEDMVDVNLK NSSQ++ Q GGC+C
Sbjct: 181 QEDMVDVNLKSSNANSSQSQAQAGGCSC 208
>gi|388498202|gb|AFK37167.1| unknown [Medicago truncatula]
Length = 206
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/207 (85%), Positives = 191/207 (92%), Gaps = 1/207 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTS+WIEEVR+ERG DVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVS EEG+ K++E VMFIETSAKAGFNIK LFRKIAAALPGMETLS+TK
Sbjct: 121 GNKTDLVEKRQVSTEEGEAKSRELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSTTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
QEDMVDVNL+ + S ++ Q GGC+C
Sbjct: 181 QEDMVDVNLRSS-TSHDSQPQSGGCSC 206
>gi|384247403|gb|EIE20890.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 212
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/195 (89%), Positives = 185/195 (94%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 6 TVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQL 65
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNT+RWIEEVRTERG DVI+VLVGN
Sbjct: 66 WDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWIEEVRTERGSDVIVVLVGN 125
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLVDKRQVSIEEGD KA+EF VMFIETSAKAGFNIK LFRKIAAALPGME+LS+ KQE
Sbjct: 126 KTDLVDKRQVSIEEGDAKAREFNVMFIETSAKAGFNIKALFRKIAAALPGMESLSAAKQE 185
Query: 183 DMVDVNLKPTVNSSQ 197
D+VDVNL T NS +
Sbjct: 186 DLVDVNLSATANSGR 200
>gi|168002794|ref|XP_001754098.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162694652|gb|EDQ80999.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 211
Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/205 (86%), Positives = 189/205 (92%), Gaps = 2/205 (0%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD +YQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 9 TVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQL 68
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAVIVYDV+NRQSFLNT+RW+EEVRTERG DVI++LVGN
Sbjct: 69 WDTAGQERFRSLIPSYIRDSSVAVIVYDVSNRQSFLNTARWVEEVRTERGNDVIVMLVGN 128
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLVDKRQVSIEEGD KAKE VMFIETS+KAGFNIK LFRKIA ALPGME LSS K +
Sbjct: 129 KTDLVDKRQVSIEEGDAKAKELQVMFIETSSKAGFNIKALFRKIAVALPGMEALSSHK-D 187
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
D+VDVNLKPT N + E + GGCAC
Sbjct: 188 DLVDVNLKPTSN-ALAEAKEGGCAC 211
>gi|225427294|ref|XP_002281823.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
gi|147782540|emb|CAN75036.1| hypothetical protein VITISV_014840 [Vitis vinifera]
Length = 208
Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 181/208 (87%), Positives = 189/208 (90%), Gaps = 1/208 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIEEG+ KA+E VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGG-GCAC 207
QEDMVDVNLK + S+ Q GC+C
Sbjct: 181 QEDMVDVNLKSSSGSASQSQTQARGCSC 208
>gi|357482281|ref|XP_003611426.1| Ras-related protein Rab-6 [Medicago truncatula]
gi|355512761|gb|AES94384.1| Ras-related protein Rab-6 [Medicago truncatula]
Length = 226
Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 178/226 (78%), Positives = 193/226 (85%), Gaps = 19/226 (8%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNT++WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTTKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVSIE+G+ KA+E VMFIETSAKAGFNIK LFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVEKRQVSIEDGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQ-------------------QGGGCAC 207
QED+VDVNLK + ++Q++ Q GGC+C
Sbjct: 181 QEDLVDVNLKSSSGNAQSQTQSNMVDVNLKSSSCHESQPQSGGCSC 226
>gi|414590929|tpg|DAA41500.1| TPA: hypothetical protein ZEAMMB73_483526 [Zea mays]
Length = 209
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/207 (88%), Positives = 193/207 (93%), Gaps = 2/207 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A VS LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 4 AVVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV+NRQSFLNTS+WI+EVRTERGGDVIIVLVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSKWIDEVRTERGGDVIIVLVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDLVDKRQVS EEG+ KAKE VMFIETSAKAGFNIKPLFRKIAAALPGMETLS+ KQ
Sbjct: 124 NKTDLVDKRQVSTEEGESKAKELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSA-KQ 182
Query: 182 EDMVDVNLK-PTVNSSQTEQQGGGCAC 207
EDMVDVNLK + S+ +Q+G GCAC
Sbjct: 183 EDMVDVNLKSTSSQSNSQQQEGSGCAC 209
>gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa
Japonica Group]
Length = 215
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 188/211 (89%), Gaps = 7/211 (3%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 5 VSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVRLQLW 64
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVIVYDV +RQSFL+ S+WIEEV T+RGGDVIIVLVGNK
Sbjct: 65 DTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLSISKWIEEVNTQRGGDVIIVLVGNK 124
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDLVDKRQ+S +EG+ KA+E G MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS KQED
Sbjct: 125 TDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQED 184
Query: 184 MVDVNLKPTVN-------SSQTEQQGGGCAC 207
MVD+NL+P + +Q EQ+ GGC+C
Sbjct: 185 MVDINLRPAASGQIPSGAEAQEEQKAGGCSC 215
>gi|356563429|ref|XP_003549965.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 213
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/203 (85%), Positives = 185/203 (91%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTS+WIEEVR+ERG DVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVS EEG+ K++E VMFIE SAKAGFNIK LFRKIAAALPGMETLS+TK
Sbjct: 121 GNKTDLVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSTTK 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGG 203
QEDMVDVNL+ + + Q GG
Sbjct: 181 QEDMVDVNLRSSGSHDSQPQSGG 203
>gi|388519757|gb|AFK47940.1| unknown [Lotus japonicus]
Length = 191
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/192 (90%), Positives = 183/192 (95%), Gaps = 1/192 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNT++W+EEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNKWVEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVSIEEGD K++EFG+MFIETSAKAGFNIKPLFRKIAAALPG + +
Sbjct: 121 GNKTDLVDKRQVSIEEGDAKSREFGIMFIETSAKAGFNIKPLFRKIAAALPGWKHF-LLQ 179
Query: 181 QEDMVDVNLKPT 192
EDMVDVNLKPT
Sbjct: 180 TEDMVDVNLKPT 191
>gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa
Japonica Group]
Length = 215
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 187/211 (88%), Gaps = 7/211 (3%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 5 VSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVRLQLW 64
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVIVYDV +QSFL+ S+WIEEV T+RGGDVIIVLVGNK
Sbjct: 65 DTAGQERFRSLIPSYIRDSSVAVIVYDVTGKQSFLSISKWIEEVNTQRGGDVIIVLVGNK 124
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDLVDKRQ+S +EG+ KA+E G MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS KQED
Sbjct: 125 TDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQED 184
Query: 184 MVDVNLKPTVN-------SSQTEQQGGGCAC 207
MVD+NL+P + +Q EQ+ GGC+C
Sbjct: 185 MVDINLRPAASGQIPSGAEAQEEQKAGGCSC 215
>gi|167998402|ref|XP_001751907.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697005|gb|EDQ83342.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/207 (85%), Positives = 187/207 (90%), Gaps = 7/207 (3%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
+A+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 5 IATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 64
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYD SFLNT RW+EEVRTERG DVII+LV
Sbjct: 65 QLWDTAGQERFRSLIPSYIRDSSVAVVVYD-----SFLNTVRWVEEVRTERGSDVIIMLV 119
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVS+EEGD KA EFGVMFIETS+ AGFNIK LFRKIAAALPGME LSS K
Sbjct: 120 GNKTDLVDKRQVSVEEGDAKANEFGVMFIETSSNAGFNIKALFRKIAAALPGMEALSSHK 179
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+D+VDV+LKPT N QTE + GGCAC
Sbjct: 180 -DDLVDVSLKPTSN-PQTEGKAGGCAC 204
>gi|168057732|ref|XP_001780867.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162667723|gb|EDQ54346.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 210
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/206 (81%), Positives = 188/206 (91%), Gaps = 1/206 (0%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S+SPL+KYKLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRLQL
Sbjct: 5 SISPLSKYKLVFLGDQSVGKTSIITRFMYDKFDQTYQPTIGIDFLSKTMYLEDRTVRLQL 64
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAVIVYDV+NRQSF+NT+RW+EEVR ERG DV++VLVGN
Sbjct: 65 WDTAGQERFRSLIPSYIRDSSVAVIVYDVSNRQSFVNTARWVEEVRAERGKDVVLVLVGN 124
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLVDKRQVS+EEG+ KA+E + IETSAKAGFNIK LFRKIA ALPGME+++ +KQ+
Sbjct: 125 KTDLVDKRQVSVEEGETKARELSALMIETSAKAGFNIKSLFRKIAGALPGMESVNPSKQD 184
Query: 183 DMVDVNLKPTVNSSQTE-QQGGGCAC 207
D VD+NLK T N++Q+E Q GGCAC
Sbjct: 185 DYVDINLKTTSNNTQSEGQTAGGCAC 210
>gi|307104270|gb|EFN52525.1| GTP binding protein [Chlorella variabilis]
Length = 211
Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 172/206 (83%), Positives = 181/206 (87%), Gaps = 2/206 (0%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 6 VQPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 65
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAV+VYDV +RQSFLN RW+EEVR ERG DVIIVLVGNK
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAVVVYDVTSRQSFLNIQRWVEEVRAERGSDVIIVLVGNK 125
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDLVDKRQVSIEEGD KA+E VMFIETSAKAGFNIK LFRKIAAALPGME L+S KQED
Sbjct: 126 TDLVDKRQVSIEEGDAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMEALNSAKQED 185
Query: 184 MVDVNLKPTVNSSQTEQQGGG--CAC 207
+VD+NL P+ + G CAC
Sbjct: 186 LVDINLAPSSAAKAGAGGSAGSTCAC 211
>gi|351723117|ref|NP_001235476.1| uncharacterized protein LOC100527651 [Glycine max]
gi|255632858|gb|ACU16782.1| unknown [Glycine max]
Length = 213
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 172/203 (84%), Positives = 186/203 (91%), Gaps = 1/203 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTS+WIEEVR+ERG DVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKRQVS EEG+ K++E VMFIE SAKAGFNIK LFRKI AALPGMETLS+TK
Sbjct: 121 GNKTDLVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIDAALPGMETLSTTK 180
Query: 181 QEDMVDVNLKPT-VNSSQTEQQG 202
QEDMVDVNL+ + + SQ + +G
Sbjct: 181 QEDMVDVNLRSSGSHDSQPQSRG 203
>gi|296084653|emb|CBI25776.3| unnamed protein product [Vitis vinifera]
Length = 178
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYDKFD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDSSVAVIVY
Sbjct: 1 MYDKFDATYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
DV NRQSFLNTS+WIEEVRTERG DVIIVLVGNKTDLVDKRQVSIEEGD K+++FGVMFI
Sbjct: 61 DVGNRQSFLNTSKWIEEVRTERGTDVIIVLVGNKTDLVDKRQVSIEEGDTKSRDFGVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAGFNIKPLFRKIA+ALPGMETLSSTKQEDMVDVNLKP+VNSSQTEQQGGGCAC
Sbjct: 121 ETSAKAGFNIKPLFRKIASALPGMETLSSTKQEDMVDVNLKPSVNSSQTEQQGGGCAC 178
>gi|357113652|ref|XP_003558615.1| PREDICTED: ras-related protein RABH1b-like [Brachypodium
distachyon]
Length = 215
Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/211 (79%), Positives = 187/211 (88%), Gaps = 7/211 (3%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRT+RLQLW
Sbjct: 5 VSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTIRLQLW 64
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG-DVIIVLVGN 122
DTAGQERFRSLIPSYIRDSSVAVIVYDV +RQSFL+TS WI+EV+TER G DV+IVLVGN
Sbjct: 65 DTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLHTSTWIDEVKTERAGTDVLIVLVGN 124
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLVDKRQV +EG+ KA+E GVMFIETSAKAGFN+KPLFRKIA +LPGM+ LSS KQE
Sbjct: 125 KTDLVDKRQVPTDEGEAKAQEHGVMFIETSAKAGFNVKPLFRKIATSLPGMDALSSAKQE 184
Query: 183 DMVDVNLKPTVNS------SQTEQQGGGCAC 207
DMVD+NL+P S +Q EQ+ GGC+C
Sbjct: 185 DMVDINLRPASGSKAPGAAAQQEQKAGGCSC 215
>gi|226507380|ref|NP_001147620.1| LOC100281229 [Zea mays]
gi|195612600|gb|ACG28130.1| ras-related protein Rab-6A [Zea mays]
gi|414865275|tpg|DAA43832.1| TPA: hypothetical protein ZEAMMB73_661349 [Zea mays]
Length = 213
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/213 (78%), Positives = 190/213 (89%), Gaps = 6/213 (2%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLG+Q+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAVVSALAKYKLVFLGNQAVGKTAIITRFMYDKFDDTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDV +RQSFLNTS+WIEEV T+RGGDV+I LV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLNTSKWIEEVNTQRGGDVLIFLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLVDKR+VS +EG+ KA+E G MF+ETSAKAGFN+KPLFRKIA +LPG++ LSS K
Sbjct: 121 GNKTDLVDKRKVSTDEGEAKAQEHGAMFMETSAKAGFNVKPLFRKIAGSLPGLDALSSGK 180
Query: 181 QEDMVDVNLKP------TVNSSQTEQQGGGCAC 207
QEDMVD+NL+P + ++Q EQ+ GGC+C
Sbjct: 181 QEDMVDINLRPASGSSASGAAAQLEQKSGGCSC 213
>gi|388514011|gb|AFK45067.1| unknown [Lotus japonicus]
Length = 210
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 169/193 (87%), Positives = 178/193 (92%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIVYD+A+RQ+FLNTS+WIEEV +ERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDIASRQTFLNTSKWIEEVHSERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDLV+KRQVS EE + KA+E VMFIE SAKAGFNIK LFRKIAAALPGMETLS+TK
Sbjct: 121 GNKTDLVEKRQVSTEEAEAKARELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSTTK 180
Query: 181 QEDMVDVNLKPTV 193
QEDMVDVNL V
Sbjct: 181 QEDMVDVNLSLLV 193
>gi|218199658|gb|EEC82085.1| hypothetical protein OsI_26083 [Oryza sativa Indica Group]
Length = 244
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/244 (76%), Positives = 194/244 (79%), Gaps = 37/244 (15%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKR------------------------------------QVSIEEGDGKAKEF 144
GNKTDLVDK QVSIEEG+GKAK+
Sbjct: 121 GNKTDLVDKSYYAMIEQYNNLAQNSLPYNFSWIKLKVCDSKQCHVMQVSIEEGEGKAKDL 180
Query: 145 GVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK-PTVNSSQTEQQGG 203
GVMFIETSAKAGFNIK LFRKIAAALPGMETLSS KQEDMVDVNLK NSSQ++ Q G
Sbjct: 181 GVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNANSSQSQAQAG 240
Query: 204 GCAC 207
GC+C
Sbjct: 241 GCSC 244
>gi|222637080|gb|EEE67212.1| hypothetical protein OsJ_24329 [Oryza sativa Japonica Group]
Length = 244
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/244 (76%), Positives = 194/244 (79%), Gaps = 37/244 (15%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA VS LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFLNTS+WIEEVRTERG DVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 121 GNKTDLVDKR------------------------------------QVSIEEGDGKAKEF 144
GNKTDLVDK QVSIEEG+GKAK+
Sbjct: 121 GNKTDLVDKSYYAMIEQYDNLAQNSLPYNFSWIKLKVCDSKQCHVMQVSIEEGEGKAKDL 180
Query: 145 GVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK-PTVNSSQTEQQGG 203
GVMFIETSAKAGFNIK LFRKIAAALPGMETLSS KQEDMVDVNLK NSSQ++ Q G
Sbjct: 181 GVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNANSSQSQAQAG 240
Query: 204 GCAC 207
GC+C
Sbjct: 241 GCSC 244
>gi|58331779|gb|AAW70387.1| At5g10260 [Arabidopsis thaliana]
gi|89111880|gb|ABD60712.1| At5g10260 [Arabidopsis thaliana]
Length = 178
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/178 (92%), Positives = 172/178 (96%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY
Sbjct: 1 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
DVANRQSFLNTS+WIE+VRTERG DVIIVLVGNKTDLVDKRQVSIEEGD KA+++GV+FI
Sbjct: 61 DVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNKARDYGVIFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK + NS+Q EQQ GGCAC
Sbjct: 121 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKTSSNSAQGEQQRGGCAC 178
>gi|326503002|dbj|BAJ99126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 298
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/210 (76%), Positives = 182/210 (86%), Gaps = 6/210 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 89 VSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVRLQLW 148
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVIVYDV + QSFL+TS+WI+EV T RG DV+IVLVGNK
Sbjct: 149 DTAGQERFRSLIPSYIRDSSVAVIVYDVTDTQSFLHTSKWIDEVNTARGKDVLIVLVGNK 208
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDLVD+RQV +EG+ KAKE G +F+ETSAKAGFNIK LFR IAA+LPGM+ +SS KQED
Sbjct: 209 TDLVDQRQVPTDEGEAKAKEHGALFMETSAKAGFNIKALFRTIAASLPGMDAVSSAKQED 268
Query: 184 MVDVNLKPTVNSS------QTEQQGGGCAC 207
MVD+NL+P + Q E++ GGC+C
Sbjct: 269 MVDINLRPASGPAGSGTAGQQEEKAGGCSC 298
>gi|326518973|dbj|BAJ92647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 161/210 (76%), Positives = 182/210 (86%), Gaps = 6/210 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 65 VSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTVRLQLW 124
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVIVYDV + QSFL+TS+WI+EV T RG DV+IVLVGNK
Sbjct: 125 DTAGQERFRSLIPSYIRDSSVAVIVYDVTDTQSFLHTSKWIDEVNTARGKDVLIVLVGNK 184
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDLVD+RQV +EG+ KAKE G +F+ETSAKAGFNIK LFR IAA+LPGM+ +SS KQED
Sbjct: 185 TDLVDQRQVPTDEGEAKAKEHGALFMETSAKAGFNIKALFRTIAASLPGMDAVSSAKQED 244
Query: 184 MVDVNLKPTVNSS------QTEQQGGGCAC 207
MVD+NL+P + Q E++ GGC+C
Sbjct: 245 MVDINLRPASGPAGSGTAGQQEEKAGGCSC 274
>gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158284201|gb|EDP09951.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 211
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/208 (78%), Positives = 179/208 (86%), Gaps = 2/208 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ SPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 4 ATTSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYD+ NRQSFLNT+RWI+EVRTERG DVII LVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTARWIQEVRTERGNDVIIFLVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL+DKRQVSIEEGD KA+E V FIETSAKAG NIK LFRKIAAALPGME+++ KQ
Sbjct: 124 NKTDLIDKRQVSIEEGDAKARELNVNFIETSAKAGLNIKALFRKIAAALPGMESVTQNKQ 183
Query: 182 EDMVDVNLKPTVNS--SQTEQQGGGCAC 207
E M +V L + + S+ C+C
Sbjct: 184 EQMEEVKLTTSTVTLDSKPPPPPATCSC 211
>gi|297798016|ref|XP_002866892.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312728|gb|EFH43151.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/198 (84%), Positives = 182/198 (91%), Gaps = 2/198 (1%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAAVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVL 119
QLWDTAGQERFRSLIPSYIRDSSVA++VYDV+NRQ+FLNTS+WI++V ERG DVIIVL
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIDDVHRERGQSDVIIVL 120
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-S 178
VGNKTDLV+KRQVSI EG+ K KE+GVMFIETSAK FNIK LFRKIAAALPG++T S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDTYSLA 180
Query: 179 TKQEDMVDVNLKPTVNSS 196
TK EDMVDVNLK T NSS
Sbjct: 181 TKSEDMVDVNLKTTSNSS 198
>gi|312283531|dbj|BAJ34631.1| unnamed protein product [Thellungiella halophila]
Length = 213
Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/213 (81%), Positives = 187/213 (87%), Gaps = 6/213 (2%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VS LAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAAVSALAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVL 119
QLWDTAGQERFRSLIPSYIRDSSVA++VYDVANRQ+FLN S+WI++V ERG GDVIIVL
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVANRQTFLNISKWIDDVHRERGSGDVIIVL 120
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS- 178
VGNKTDLV+KRQVSI EG+ K KE GVMFIETSAK FNIK LFRKIAAALPGM++ SS
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEHGVMFIETSAKENFNIKALFRKIAAALPGMDSYSSA 180
Query: 179 TKQEDMVDVNLKPTVNSS----QTEQQGGGCAC 207
TK EDMVDVNLK T NSS Q GGGC+C
Sbjct: 181 TKSEDMVDVNLKTTSNSSQGEQQGGGGGGGCSC 213
>gi|302833886|ref|XP_002948506.1| RabH/Rab6 [Volvox carteri f. nagariensis]
gi|300266193|gb|EFJ50381.1| RabH/Rab6 [Volvox carteri f. nagariensis]
Length = 211
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 177/205 (86%), Gaps = 2/205 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SPLAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ NRQSFLNT+RWI+EVRTERG DVII LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTARWIQEVRTERGNDVIIFLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL+DKRQVSIEEGD KA+E V FIETSAKAG NIK LFRKIAAALPGME+++ KQE M
Sbjct: 127 DLIDKRQVSIEEGDAKARELNVNFIETSAKAGLNIKALFRKIAAALPGMESVTQNKQEQM 186
Query: 185 VDVNLKPTVNS--SQTEQQGGGCAC 207
+V L + + ++ C+C
Sbjct: 187 EEVKLTTSTVTLDAKPPPPASTCSC 211
>gi|15236081|ref|NP_195699.1| Ras-related protein RABH1C [Arabidopsis thaliana]
gi|75337423|sp|Q9SMR4.1|RAH1C_ARATH RecName: Full=Ras-related protein RABH1c; Short=AtRABH1c
gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|332661734|gb|AEE87134.1| Ras-related protein RABH1C [Arabidopsis thaliana]
Length = 214
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/198 (83%), Positives = 182/198 (91%), Gaps = 2/198 (1%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MASVSPLAK+KLVFLGDQSVGKTSIITRFMYDKFDTTYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVL 119
QLWDTAGQERFRSLIPSYIRDSSVA++VYDV+NRQ+FLNTS+WIE+V ERG +VIIVL
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-S 178
VGNKTDLV+KRQVSI EG+ K KE+GVMFIETSAK FNIK LFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180
Query: 179 TKQEDMVDVNLKPTVNSS 196
TK +DMVDVNLK T NSS
Sbjct: 181 TKSDDMVDVNLKTTSNSS 198
>gi|388496116|gb|AFK36124.1| unknown [Medicago truncatula]
Length = 180
Score = 332 bits (850), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 159/173 (91%), Positives = 169/173 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGD+SVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDRSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q WDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQSFLNT++W+EEVR ERG DVIIVLV
Sbjct: 61 QPWDTAGQERFRSLIPSYIRDSSVAVIVYDVAHRQSFLNTNKWVEEVRQERGSDVIIVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
GNKTDLV+KRQVSIEEGD K+KEFG+MFIETSAKAGFNIKPLFRKIA+ALPGM
Sbjct: 121 GNKTDLVEKRQVSIEEGDAKSKEFGIMFIETSAKAGFNIKPLFRKIASALPGM 173
>gi|255072909|ref|XP_002500129.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
gi|226515391|gb|ACO61387.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
Length = 204
Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/210 (76%), Positives = 180/210 (85%), Gaps = 9/210 (4%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M++V+P+AKYKLVFLGDQSVGKTSII+RFMYDKFD +YQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MSTVTPMAKYKLVFLGDQSVGKTSIISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVAV+VYDV++R SF NTSRWI+EVRTERG DVI+VLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVSSRSSFANTSRWIDEVRTERGSDVIVVLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS--S 178
GNKTDL DKR+VS+EEGD +A+E GVMFIETSAKAGFN+K LFRKIAAALPGME + +
Sbjct: 121 GNKTDLTDKREVSVEEGDARAREAGVMFIETSAKAGFNVKALFRKIAAALPGMEAPAAPA 180
Query: 179 TKQED-MVDVNLKPTVNSSQTEQQGGGCAC 207
K ED +VDV L + CAC
Sbjct: 181 AKVEDRLVDVKL------TAPAPPASSCAC 204
>gi|297734673|emb|CBI16724.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/179 (87%), Positives = 167/179 (93%), Gaps = 1/179 (0%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY
Sbjct: 1 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
DVA+RQSFLNT++WIEEVRTERG DVIIVLVGNKTDLVDKRQVSIEEG+ KA++ VMFI
Sbjct: 61 DVASRQSFLNTAKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGEAKARDLNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPT-VNSSQTEQQGGGCAC 207
ETSAKAGFNIK LFRKIAAALPGMETLSS KQEDMVDVNLK + N+SQ++ Q GGC+C
Sbjct: 121 ETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNTNASQSQPQAGGCSC 179
>gi|297797521|ref|XP_002866645.1| hypothetical protein ARALYDRAFT_496719 [Arabidopsis lyrata subsp.
lyrata]
gi|297312480|gb|EFH42904.1| hypothetical protein ARALYDRAFT_496719 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 158/199 (79%), Positives = 174/199 (87%), Gaps = 1/199 (0%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YKLVFLGDQ VGKTSIIT FMY KFDT+YQATIGIDFLSKTM EDRT RLQLWDTAGQE
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTMRYEDRTFRLQLWDTAGQE 67
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF+SL+PSYIRDSSVAVIVYDVA++QSFLNTS+WIEEVR ERG VIIVLVGNKTDLV+K
Sbjct: 68 RFKSLVPSYIRDSSVAVIVYDVASKQSFLNTSKWIEEVRAERGSHVIIVLVGNKTDLVNK 127
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVSIEEGD KA+EFG +F+ETSAKAGFNIKPLF KI +AL G E +S TK ED+VDVNL
Sbjct: 128 RQVSIEEGDNKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKPEDLVDVNL 187
Query: 190 KPTVNSSQTE-QQGGGCAC 207
KP + SSQ + QQ C+C
Sbjct: 188 KPLIISSQADHQQESNCSC 206
>gi|15238317|ref|NP_201304.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
gi|75335533|sp|Q9LV79.1|RAH1A_ARATH RecName: Full=Ras-related protein RABH1a; Short=AtRABH1a
gi|8843763|dbj|BAA97311.1| GTP binding protein-like [Arabidopsis thaliana]
gi|332010596|gb|AED97979.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
Length = 206
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 156/199 (78%), Positives = 173/199 (86%), Gaps = 1/199 (0%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YKLVFLGDQ VGKTSIIT FMY KFDT+YQATIGIDFLSKT EDRT RLQLWDTAGQE
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQE 67
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF+SL+PSYIRDSSVAVIVYDVA++QSF+NTS+WIEEVR ERG VIIVLVGNKTDLV+K
Sbjct: 68 RFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNK 127
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVSIEEG+ KA+EFG +F+ETSAKAGFNIKPLF KI +AL G E +S TKQED+VDVNL
Sbjct: 128 RQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNL 187
Query: 190 KPTVNSSQ-TEQQGGGCAC 207
KP + SSQ QQ C+C
Sbjct: 188 KPLMFSSQANHQQESNCSC 206
>gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579169|gb|ABO97232.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/206 (75%), Positives = 174/206 (84%), Gaps = 6/206 (2%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A V+PL KYKLVFLGDQSVGKTSII+RFMYDKFD +YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 6 AGVTPLPKYKLVFLGDQSVGKTSIISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQ 65
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVIVYDV++R SF+N+++WI EV+ ERGGDVII LVG
Sbjct: 66 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVSSRASFVNSAKWISEVKAERGGDVIIALVG 125
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL D R+VS EG+ KAKE GVMFIETSAKAGFN+K LFRKIAAALPGMET S+
Sbjct: 126 NKTDL-DGREVSAAEGEAKAKEEGVMFIETSAKAGFNVKVLFRKIAAALPGMETPSTKAD 184
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
ED+V+V L + Q +Q C
Sbjct: 185 EDLVEVKL-----TGQAQQSAKSSCC 205
>gi|387016274|gb|AFJ50256.1| GTP-binding protein [Crotalus adamanteus]
Length = 208
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 174/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + +E GGC+C
Sbjct: 189 IDIKLEKPQEQAVSE---GGCSC 208
>gi|291235598|ref|XP_002737729.1| PREDICTED: Rab-protein 6-like [Saccoglossus kowalevskii]
Length = 210
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 173/204 (84%), Gaps = 3/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ-ED 183
DL DKRQVSI+EG+ KAKE VM IETSAK G+N+K LFR++AAALPGME+ K +D
Sbjct: 129 DLADKRQVSIDEGERKAKELNVMHIETSAKTGYNVKQLFRRVAAALPGMESQEQKKNDQD 188
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
M++V LK T Q QQ GGCAC
Sbjct: 189 MIEVKLKDTPQEPQ--QQEGGCAC 210
>gi|189233646|ref|XP_972453.2| PREDICTED: similar to rab6 [Tribolium castaneum]
Length = 324
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 173/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 124 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 183
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 184 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 243
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 244 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 303
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T N + + GGCAC
Sbjct: 304 QEVVLKDTPN--EVKDPDGGCAC 324
>gi|303277025|ref|XP_003057806.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460463|gb|EEH57757.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 155/217 (71%), Positives = 179/217 (82%), Gaps = 16/217 (7%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A V+P+AKYKLVFLGDQSVGKTS+I+RFMYDKFD +YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 4 AGVTPMAKYKLVFLGDQSVGKTSVISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV++R SFLN +RWI+EVRTERG DVIIVLVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVSSRASFLNCARWIDEVRTERGSDVIIVLVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP---------G 172
NKTDLV++R+VS+EEGD +A+E GVMFIE SAKAGFN+K LFRKIAAALP G
Sbjct: 124 NKTDLVERREVSVEEGDARAREHGVMFIECSAKAGFNVKALFRKIAAALPGAEAGVGAGG 183
Query: 173 METLSSTKQEDMVDVNL--KPTVNSSQTEQQGGGCAC 207
+ ++ +VDV L +P +S+ G CAC
Sbjct: 184 GAAARAKAEDQLVDVKLTSQPVASSA-----GSSCAC 215
>gi|195443010|ref|XP_002069232.1| GK21078 [Drosophila willistoni]
gi|194165317|gb|EDW80218.1| GK21078 [Drosophila willistoni]
Length = 208
Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 128 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK + N S+ + GGCAC
Sbjct: 188 QEVVLKDSPNESKDPE--GGCAC 208
>gi|345571504|gb|EGX54318.1| hypothetical protein AOL_s00004g351 [Arthrobotrys oligospora ATCC
24927]
Length = 211
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/204 (74%), Positives = 172/204 (84%), Gaps = 5/204 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ NRQSFLNTS+W+++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTSKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME-TLSSTKQED 183
DL DKRQV+ EEG+ KAKEF VMFIETSAKAG N+K LF++IA ALPGME L +
Sbjct: 132 DLNDKRQVTTEEGEKKAKEFKVMFIETSAKAGHNVKTLFKRIAQALPGMEGPLGDDAGKQ 191
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
M+DVN+KP S+ + CAC
Sbjct: 192 MIDVNIKPETGSTANDN----CAC 211
>gi|395814868|ref|XP_003780961.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Otolemur
garnettii]
Length = 208
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 174/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + +E GGC+C
Sbjct: 189 IDIKLEKPQEPTVSE---GGCSC 208
>gi|158297778|ref|XP_001238010.2| AGAP011363-PA [Anopheles gambiae str. PEST]
gi|157014741|gb|EAU76291.2| AGAP011363-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK + N +T+ GGCAC
Sbjct: 189 HEVVLKDSPN--ETKDPEGGCAC 209
>gi|163915527|gb|AAI57380.1| Rab6a protein [Danio rerio]
Length = 208
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPPEQPVSE---GGCSC 208
>gi|83751822|gb|ABC42924.1| GTP-binding protein [Anas platyrhynchos]
Length = 208
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|17137220|ref|NP_477172.1| Rab6 [Drosophila melanogaster]
gi|125985285|ref|XP_001356406.1| GA19714 [Drosophila pseudoobscura pseudoobscura]
gi|194765981|ref|XP_001965103.1| GF23429 [Drosophila ananassae]
gi|194861334|ref|XP_001969761.1| GG10272 [Drosophila erecta]
gi|195035425|ref|XP_001989178.1| GH10191 [Drosophila grimshawi]
gi|195147148|ref|XP_002014542.1| GL18897 [Drosophila persimilis]
gi|195351007|ref|XP_002042028.1| GM26307 [Drosophila sechellia]
gi|195387894|ref|XP_002052627.1| GJ20647 [Drosophila virilis]
gi|195472321|ref|XP_002088449.1| GE12402 [Drosophila yakuba]
gi|2313037|dbj|BAA21707.1| rab6 [Drosophila melanogaster]
gi|7297923|gb|AAF53168.1| Rab6 [Drosophila melanogaster]
gi|16648070|gb|AAL25300.1| GH09086p [Drosophila melanogaster]
gi|54644730|gb|EAL33470.1| GA19714 [Drosophila pseudoobscura pseudoobscura]
gi|190617713|gb|EDV33237.1| GF23429 [Drosophila ananassae]
gi|190661628|gb|EDV58820.1| GG10272 [Drosophila erecta]
gi|193905178|gb|EDW04045.1| GH10191 [Drosophila grimshawi]
gi|194106495|gb|EDW28538.1| GL18897 [Drosophila persimilis]
gi|194123852|gb|EDW45895.1| GM26307 [Drosophila sechellia]
gi|194149084|gb|EDW64782.1| GJ20647 [Drosophila virilis]
gi|194174550|gb|EDW88161.1| GE12402 [Drosophila yakuba]
gi|220945102|gb|ACL85094.1| Rab6-PA [synthetic construct]
gi|220954838|gb|ACL89962.1| Rab6-PA [synthetic construct]
Length = 208
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 128 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK + N +T+ GGCAC
Sbjct: 188 QEVVLKDSPN--ETKDPEGGCAC 208
>gi|157112172|ref|XP_001657423.1| rab6 [Aedes aegypti]
gi|157112174|ref|XP_001657424.1| rab6 [Aedes aegypti]
gi|108878119|gb|EAT42344.1| AAEL006091-PA [Aedes aegypti]
gi|403182767|gb|EJY57618.1| AAEL006091-PC [Aedes aegypti]
Length = 209
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK + N +T+ GGCAC
Sbjct: 189 QEVVLKDSPN--ETKDPEGGCAC 209
>gi|157112176|ref|XP_001657425.1| rab6 [Aedes aegypti]
gi|108878120|gb|EAT42345.1| AAEL006091-PB [Aedes aegypti]
Length = 210
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 172/203 (84%), Gaps = 1/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + ED
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDT 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VD+ +P+ NS + GGC C
Sbjct: 189 VDLQTQPS-NSGDQQDSEGGCMC 210
>gi|298707324|emb|CBJ25951.1| Rab6, RAB family GTPase [Ectocarpus siliculosus]
Length = 217
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 172/205 (83%), Gaps = 4/205 (1%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++PLAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 16 IAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLW 75
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVIVYD+ NR SFLNTS+WIE+VR ERG DV+++LVGNK
Sbjct: 76 DTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNK 135
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE- 182
TDL ++RQVS+EEG+ +AK G+MFIETSAK G+NIK LFRK+A ALPGMET +T
Sbjct: 136 TDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPATSNNA 195
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
+++D+ L + TE CAC
Sbjct: 196 NLIDIKLSA---APPTEDAARTCAC 217
>gi|38679888|ref|NP_942599.1| ras-related protein Rab-6A isoform b [Homo sapiens]
gi|197102660|ref|NP_001125644.1| ras-related protein Rab-6A [Pongo abelii]
gi|397487240|ref|XP_003814713.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Pan paniscus]
gi|131796|sp|P20340.3|RAB6A_HUMAN RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|75055038|sp|Q5RAV6.3|RAB6A_PONAB RecName: Full=Ras-related protein Rab-6A
gi|4585565|gb|AAD25535.1|AF130986_1 RAS-related protein RAB6 [Homo sapiens]
gi|20379054|gb|AAM21087.1|AF498939_1 small GTP binding protein RAB6A [Homo sapiens]
gi|550072|gb|AAA60246.1| GTP-binding protein [Homo sapiens]
gi|54696264|gb|AAV38504.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|55728729|emb|CAH91104.1| hypothetical protein [Pongo abelii]
gi|61356023|gb|AAX41200.1| RAB6A member RAS oncogene family [synthetic construct]
gi|66911837|gb|AAH96818.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|119595313|gb|EAW74907.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595314|gb|EAW74908.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595316|gb|EAW74910.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595318|gb|EAW74912.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260519|dbj|BAF82437.1| unnamed protein product [Homo sapiens]
gi|158261287|dbj|BAF82821.1| unnamed protein product [Homo sapiens]
gi|190692045|gb|ACE87797.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|254071271|gb|ACT64395.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|261860502|dbj|BAI46773.1| RAB6A, member RAS oncogene family [synthetic construct]
Length = 208
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|306014631|gb|ADM76369.1| Rab-like protein, partial [Picea sitchensis]
gi|306014633|gb|ADM76370.1| Rab-like protein, partial [Picea sitchensis]
gi|306014635|gb|ADM76371.1| Rab-like protein, partial [Picea sitchensis]
gi|306014637|gb|ADM76372.1| Rab-like protein, partial [Picea sitchensis]
gi|306014639|gb|ADM76373.1| Rab-like protein, partial [Picea sitchensis]
gi|306014641|gb|ADM76374.1| Rab-like protein, partial [Picea sitchensis]
gi|306014643|gb|ADM76375.1| Rab-like protein, partial [Picea sitchensis]
gi|306014645|gb|ADM76376.1| Rab-like protein, partial [Picea sitchensis]
gi|306014647|gb|ADM76377.1| Rab-like protein, partial [Picea sitchensis]
gi|306014649|gb|ADM76378.1| Rab-like protein, partial [Picea sitchensis]
gi|306014651|gb|ADM76379.1| Rab-like protein, partial [Picea sitchensis]
gi|306014653|gb|ADM76380.1| Rab-like protein, partial [Picea sitchensis]
gi|306014655|gb|ADM76381.1| Rab-like protein, partial [Picea sitchensis]
gi|306014657|gb|ADM76382.1| Rab-like protein, partial [Picea sitchensis]
gi|306014659|gb|ADM76383.1| Rab-like protein, partial [Picea sitchensis]
gi|306014661|gb|ADM76384.1| Rab-like protein, partial [Picea sitchensis]
gi|306014663|gb|ADM76385.1| Rab-like protein, partial [Picea sitchensis]
gi|306014665|gb|ADM76386.1| Rab-like protein, partial [Picea sitchensis]
gi|306014667|gb|ADM76387.1| Rab-like protein, partial [Picea sitchensis]
gi|306014669|gb|ADM76388.1| Rab-like protein, partial [Picea sitchensis]
gi|306014671|gb|ADM76389.1| Rab-like protein, partial [Picea sitchensis]
gi|306014673|gb|ADM76390.1| Rab-like protein, partial [Picea sitchensis]
gi|306014675|gb|ADM76391.1| Rab-like protein, partial [Picea sitchensis]
gi|306014677|gb|ADM76392.1| Rab-like protein, partial [Picea sitchensis]
gi|306014679|gb|ADM76393.1| Rab-like protein, partial [Picea sitchensis]
gi|306014681|gb|ADM76394.1| Rab-like protein, partial [Picea sitchensis]
gi|306014683|gb|ADM76395.1| Rab-like protein, partial [Picea sitchensis]
gi|306014685|gb|ADM76396.1| Rab-like protein, partial [Picea sitchensis]
gi|306014687|gb|ADM76397.1| Rab-like protein, partial [Picea sitchensis]
gi|306014689|gb|ADM76398.1| Rab-like protein, partial [Picea sitchensis]
gi|306014691|gb|ADM76399.1| Rab-like protein, partial [Picea sitchensis]
gi|306014693|gb|ADM76400.1| Rab-like protein, partial [Picea sitchensis]
gi|306014695|gb|ADM76401.1| Rab-like protein, partial [Picea sitchensis]
gi|306014697|gb|ADM76402.1| Rab-like protein, partial [Picea sitchensis]
gi|306014699|gb|ADM76403.1| Rab-like protein, partial [Picea sitchensis]
gi|306014701|gb|ADM76404.1| Rab-like protein, partial [Picea sitchensis]
gi|306014703|gb|ADM76405.1| Rab-like protein, partial [Picea sitchensis]
gi|306014705|gb|ADM76406.1| Rab-like protein, partial [Picea sitchensis]
gi|306014707|gb|ADM76407.1| Rab-like protein, partial [Picea sitchensis]
gi|306014709|gb|ADM76408.1| Rab-like protein, partial [Picea sitchensis]
gi|306014711|gb|ADM76409.1| Rab-like protein, partial [Picea sitchensis]
gi|306014713|gb|ADM76410.1| Rab-like protein, partial [Picea sitchensis]
gi|306014715|gb|ADM76411.1| Rab-like protein, partial [Picea sitchensis]
gi|306014717|gb|ADM76412.1| Rab-like protein, partial [Picea sitchensis]
Length = 160
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/160 (93%), Positives = 155/160 (96%)
Query: 48 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEV 107
SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIV+DVANRQSFLNT+RWIEEV
Sbjct: 1 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEV 60
Query: 108 RTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RTERG DVIIVLVGNKTDLVDKRQVSIEEGD KA+EFGVMFIETSAKAGFNIK LFRKIA
Sbjct: 61 RTERGSDVIIVLVGNKTDLVDKRQVSIEEGDAKAREFGVMFIETSAKAGFNIKALFRKIA 120
Query: 168 AALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
AALPGMETLSSTKQEDMVDVNLKPTVNSSQ EQ+ GGC+C
Sbjct: 121 AALPGMETLSSTKQEDMVDVNLKPTVNSSQAEQKAGGCSC 160
>gi|241723781|ref|XP_002404303.1| RAS-related protein, putative [Ixodes scapularis]
gi|215505389|gb|EEC14883.1| RAS-related protein, putative [Ixodes scapularis]
gi|346471859|gb|AEO35774.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 175/203 (86%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ EEG+ KAKE VMFIETSAK+G+N+K LFR++AAALPGME TK ED+
Sbjct: 129 DLSDKRQVTTEEGERKAKELNVMFIETSAKSGYNVKQLFRRVAAALPGMENTERTK-EDI 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VDV+LK ++T + GGCAC
Sbjct: 188 VDVDLKD--GPTETPRPEGGCAC 208
>gi|328767797|gb|EGF77845.1| hypothetical protein BATDEDRAFT_20546 [Batrachochytrium
dendrobatidis JAM81]
Length = 203
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 173/203 (85%), Gaps = 7/203 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT RLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTTRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ NR SF+NTS+W+++VR ERG DVI+VLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNRNSFVNTSKWVDDVRAERGNDVIVVLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D+RQVS +EG+ KAKEF VMFIETSAKAG+N+K LF+KIA ALPGMET + + ++
Sbjct: 128 DLSDERQVSTDEGEKKAKEFNVMFIETSAKAGYNVKALFKKIAMALPGMETQGT--ENNV 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DV + PT S +G CAC
Sbjct: 186 IDVKVNPTAKS-----EGSSCAC 203
>gi|291384296|ref|XP_002708751.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 2
[Oryctolagus cuniculus]
gi|301759055|ref|XP_002915364.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Ailuropoda
melanoleuca]
gi|332211361|ref|XP_003254788.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Nomascus
leucogenys]
gi|426245107|ref|XP_004016355.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479823|tpg|DAA21938.1| TPA: RAB6A, member RAS oncogene family-like isoform 2 [Bos taurus]
gi|355566853|gb|EHH23232.1| hypothetical protein EGK_06662 [Macaca mulatta]
gi|355752448|gb|EHH56568.1| hypothetical protein EGM_06013 [Macaca fascicularis]
gi|380788413|gb|AFE66082.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
gi|380788417|gb|AFE66084.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
Length = 208
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|126327867|ref|XP_001363218.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Monodelphis
domestica]
Length = 208
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/207 (72%), Positives = 174/207 (84%), Gaps = 11/207 (5%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNL----KPTVNSSQTEQQGGGCAC 207
+D+ L +P VN GGC+C
Sbjct: 189 IDIKLEKPQEPPVNE-------GGCSC 208
>gi|270014377|gb|EFA10825.1| hypothetical protein TcasGA2_TC001600 [Tribolium castaneum]
Length = 209
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 173/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T N + + GGCAC
Sbjct: 189 QEVVLKDTPN--EVKDPDGGCAC 209
>gi|390362735|ref|XP_791590.3| PREDICTED: ras-related protein Rab-6A-like [Strongylocentrotus
purpuratus]
Length = 211
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/204 (74%), Positives = 174/204 (85%), Gaps = 2/204 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE-D 183
DL DKRQVSI+EG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ TK D
Sbjct: 129 DLADKRQVSIDEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESADQTKPAGD 188
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
M++V+L+ +T GGCAC
Sbjct: 189 MIEVSLEKN-QQQETTGNEGGCAC 211
>gi|13195674|ref|NP_077249.1| ras-related protein Rab-6A isoform 2 [Mus musculus]
gi|13638404|sp|P35279.4|RAB6A_MOUSE RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|313104164|sp|Q9WVB1.2|RAB6A_RAT RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|7670415|dbj|BAA95059.1| unnamed protein product [Mus musculus]
gi|26341820|dbj|BAC34572.1| unnamed protein product [Mus musculus]
gi|26350389|dbj|BAC38834.1| unnamed protein product [Mus musculus]
gi|26350969|dbj|BAC39121.1| unnamed protein product [Mus musculus]
gi|74144412|dbj|BAE36058.1| unnamed protein product [Mus musculus]
gi|74146903|dbj|BAE41406.1| unnamed protein product [Mus musculus]
gi|74227574|dbj|BAE35649.1| unnamed protein product [Mus musculus]
gi|112292961|dbj|BAF02858.1| Rab6A [Mus musculus]
gi|148684515|gb|EDL16462.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148684520|gb|EDL16467.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068773|gb|EDM18325.1| rCG39700, isoform CRA_b [Rattus norvegicus]
gi|149068775|gb|EDM18327.1| rCG39700, isoform CRA_b [Rattus norvegicus]
Length = 208
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ E GGC+C
Sbjct: 189 IDIKLEKPQEQPVNE---GGCSC 208
>gi|359322436|ref|XP_003639844.1| PREDICTED: ras-related protein Rab-6A [Canis lupus familiaris]
Length = 208
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|213511394|ref|NP_001133408.1| RAB6A, member RAS oncogene family [Salmo salar]
gi|209153892|gb|ACI33178.1| Ras-related protein Rab-6A [Salmo salar]
Length = 208
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+IEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVAIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPPEQPISE---GGCSC 208
>gi|195114920|ref|XP_002002015.1| GI14260 [Drosophila mojavensis]
gi|193912590|gb|EDW11457.1| GI14260 [Drosophila mojavensis]
Length = 208
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 174/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAK+ VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 128 DLSDKRQVSTEEGERKAKDLNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPSEDM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK + N +T+ GGCAC
Sbjct: 188 QEVVLKDSPN--ETKDPEGGCAC 208
>gi|348538713|ref|XP_003456835.1| PREDICTED: ras-related protein Rab-6A-like [Oreochromis niloticus]
Length = 208
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM+T +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPPEQPTSE---GGCSC 208
>gi|281211020|gb|EFA85186.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 487
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 172/201 (85%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L+KYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 287 LSKYKLVFLGDQSVGKTSIITRFMYDSFDITYQATIGIDFLSKTMYLEDRTVRLQLWDTA 346
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVA++VYD+ N+ SFLNT +WI++VR+ERG +V+I+LVGNKTDL
Sbjct: 347 GQERFRSLIPSYIRDSSVAIVVYDITNKNSFLNTIKWIDDVRSERGNNVVIMLVGNKTDL 406
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQVS+EEG+ KAKE+ +MF ETSAKAGFNIK LFRK+A+ALPG++T S + +M +
Sbjct: 407 ADKRQVSMEEGEAKAKEYEIMFTETSAKAGFNIKALFRKVASALPGIDTNSLGQAPEMAE 466
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
V L T N+ +Q C C
Sbjct: 467 VILSSTDNNKTPAEQASMCRC 487
>gi|395814866|ref|XP_003780960.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Otolemur
garnettii]
Length = 208
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + +E GGC+C
Sbjct: 189 IDIKLEKPQEPTVSE---GGCSC 208
>gi|343098455|ref|NP_001230202.1| ras-related protein Rab-6A [Sus scrofa]
Length = 208
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VD+ L+ +E GGC+C
Sbjct: 189 VDIKLEKPQEQPVSE---GGCSC 208
>gi|289741525|gb|ADD19510.1| Rab protein 6 [Glossina morsitans morsitans]
Length = 208
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/204 (74%), Positives = 175/204 (85%), Gaps = 4/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QED 183
DL DKRQVS EEG+ KAKE VMF+ETSAKAG+N+K LFR++AAALPGM++ + TK ED
Sbjct: 128 DLSDKRQVSTEEGERKAKELNVMFVETSAKAGYNVKQLFRRVAAALPGMDSTTETKPSED 187
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
M DV+L ++T+ GGCAC
Sbjct: 188 MQDVHLGV---QNETKDPEGGCAC 208
>gi|427787277|gb|JAA59090.1| Putative rab-protein 6 [Rhipicephalus pulchellus]
Length = 208
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 175/203 (86%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ E+G+ KAKE VMFIETSAK+G+N+K LFR++AAALPGME TK ED+
Sbjct: 129 DLSDKRQVTTEDGERKAKELNVMFIETSAKSGYNVKQLFRRVAAALPGMENTERTK-EDI 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VDV+LK ++T + GGCAC
Sbjct: 188 VDVDLKD--GPTETPRPEGGCAC 208
>gi|113206062|ref|NP_001038105.1| ras-related protein Rab-6A [Gallus gallus]
gi|118573265|sp|Q1KME6.3|RAB6A_CHICK RecName: Full=Ras-related protein Rab-6A
gi|93209536|gb|ABF00126.1| GTP-binding protein [Gallus gallus]
Length = 208
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|229367302|gb|ACQ58631.1| Ras-related protein Rab-6B [Anoplopoma fimbria]
Length = 208
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMY EDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYSEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WIE+VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVSSFQQTSKWIEDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L TE GGC+C
Sbjct: 189 IDIKLDKPQEPQTTE---GGCSC 208
>gi|126327865|ref|XP_001363135.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Monodelphis
domestica]
Length = 208
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 173/207 (83%), Gaps = 11/207 (5%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 188
Query: 185 VDVNL----KPTVNSSQTEQQGGGCAC 207
+D+ L +P VN GGC+C
Sbjct: 189 IDIKLEKPQEPPVNE-------GGCSC 208
>gi|300797426|ref|NP_001180044.1| ras-related protein Rab-6A [Bos taurus]
gi|386782131|ref|NP_001248232.1| ras-related protein Rab-6A [Macaca mulatta]
gi|291384294|ref|XP_002708750.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 1
[Oryctolagus cuniculus]
gi|301759053|ref|XP_002915363.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Ailuropoda
melanoleuca]
gi|332211363|ref|XP_003254789.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Nomascus
leucogenys]
gi|426245109|ref|XP_004016356.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479822|tpg|DAA21937.1| TPA: RAB6A, member RAS oncogene family-like isoform 1 [Bos taurus]
gi|380788415|gb|AFE66083.1| ras-related protein Rab-6A isoform a [Macaca mulatta]
Length = 208
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|45361477|ref|NP_989315.1| RAB6A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|39794406|gb|AAH64230.1| RAB6A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 208
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+V+D+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVFDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESSQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPPEQPVSE---GGCSC 208
>gi|19923231|ref|NP_002860.2| ras-related protein Rab-6A isoform a [Homo sapiens]
gi|397487242|ref|XP_003814714.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Pan paniscus]
gi|4680635|gb|AAD27707.1|AF130122_1 small GTP binding protein RAB6 isoform [Homo sapiens]
gi|6684463|gb|AAF23593.1|AF119836_1 GTP-binding protein RAB6C [Homo sapiens]
gi|8163754|gb|AAF73841.1|AF198616_1 Rab GTPase RAB6A' [Homo sapiens]
gi|20379058|gb|AAM21089.1|AF498941_1 small GTP binding protein RAB6C [Homo sapiens]
gi|13177664|gb|AAH03617.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|16552748|dbj|BAB71371.1| unnamed protein product [Homo sapiens]
gi|46249771|gb|AAH68486.1| RAB6A protein [Homo sapiens]
gi|119595315|gb|EAW74909.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119595317|gb|EAW74911.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 208
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|383848739|ref|XP_003700005.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Megachile
rotundata]
Length = 211
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 174/204 (85%), Gaps = 2/204 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNPNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + ED
Sbjct: 129 DLSDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDT 188
Query: 185 VDV-NLKPTVNSSQTEQQGGGCAC 207
VD+ N P N S++E + GC C
Sbjct: 189 VDLQNQSPMQNGSESEGE-SGCIC 211
>gi|147903483|ref|NP_001080506.1| RAB6A, member RAS oncogene family [Xenopus laevis]
gi|28302338|gb|AAH46683.1| Rab6-prov protein [Xenopus laevis]
Length = 208
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESSQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPPEQPVSE---GGCSC 208
>gi|213972608|ref|NP_445818.1| ras-related protein Rab-6A [Rattus norvegicus]
gi|254750706|ref|NP_001157135.1| ras-related protein Rab-6A isoform 1 [Mus musculus]
gi|17512290|gb|AAH19118.1| Rab6 protein [Mus musculus]
gi|74150583|dbj|BAE32315.1| unnamed protein product [Mus musculus]
gi|148684517|gb|EDL16464.1| RAB6, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149068776|gb|EDM18328.1| rCG39700, isoform CRA_d [Rattus norvegicus]
Length = 208
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ E GGC+C
Sbjct: 189 IDIKLEKPQEQPVNE---GGCSC 208
>gi|229367060|gb|ACQ58510.1| Ras-related protein Rab-6B [Anoplopoma fimbria]
Length = 208
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRF+YD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFVYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WIE+VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIEDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIET AK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETGAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L TE GGC+C
Sbjct: 189 IDIKLDKQQEPQTTE---GGCSC 208
>gi|340718724|ref|XP_003397813.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Bombus
terrestris]
gi|350409814|ref|XP_003488852.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Bombus
impatiens]
Length = 211
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 150/204 (73%), Positives = 174/204 (85%), Gaps = 2/204 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + ED
Sbjct: 129 DLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDT 188
Query: 185 VDV-NLKPTVNSSQTEQQGGGCAC 207
VD+ N P N S++E + GC C
Sbjct: 189 VDLQNQSPMQNGSESEGE-SGCIC 211
>gi|348513460|ref|XP_003444260.1| PREDICTED: ras-related protein Rab-6B-like [Oreochromis niloticus]
Length = 208
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L E GGC+C
Sbjct: 189 IDIKLDKPQEPPTNE---GGCSC 208
>gi|62898834|dbj|BAD97271.1| RAB6A, member RAS oncogene family isoform a variant [Homo sapiens]
Length = 208
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG D+II+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDIIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|410915364|ref|XP_003971157.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Takifugu
rubripes]
Length = 208
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM+T +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ E GGC+C
Sbjct: 189 IDIKLEKPPELPANE---GGCSC 208
>gi|47222578|emb|CAG02943.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM+T +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ E GGC+C
Sbjct: 189 IDIKLEKPPELPPNE---GGCSC 208
>gi|297742149|emb|CBI33936.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/179 (86%), Positives = 162/179 (90%), Gaps = 1/179 (0%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYDKFD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY
Sbjct: 1 MYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
DVA+RQSFLNTS+WIEEVRTERG DVIIVLVGNKTDLV+KRQVSIEEG+ KA+E VMFI
Sbjct: 61 DVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGG-GCAC 207
ETSAKAGFNIK LFRKIAAALPGMETLSS KQEDMVDVNLK + S+ Q GC+C
Sbjct: 121 ETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSSGSASQSQTQARGCSC 179
>gi|356540581|ref|XP_003538766.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 208
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/190 (81%), Positives = 168/190 (88%), Gaps = 3/190 (1%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDF-LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
GKTSIITRFMYDKFD TYQATIGIDF LSKT+Y+EDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 20 CGKTSIITRFMYDKFDNTYQATIGIDFFLSKTLYVEDRTVRLQLWDTAGQERFRSLIPSY 79
Query: 79 IRDSSVA-VIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEG 137
IRDSSVA VI YDVA+RQ+FLNTSRWIEEVR ERG D IIV VGNKTDLV+KRQVS EEG
Sbjct: 80 IRDSSVAYVIAYDVASRQTFLNTSRWIEEVRIERGSDAIIVHVGNKTDLVNKRQVSTEEG 139
Query: 138 DGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQ 197
+ K++E VMFIE SAKAGFNIK LFRKIAAALPGMETLSSTKQEDMVDV+L+ + Q
Sbjct: 140 EAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVDLR-SFGGYQ 198
Query: 198 TEQQGGGCAC 207
++ Q GGCAC
Sbjct: 199 SQPQSGGCAC 208
>gi|334188628|ref|NP_001190616.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
gi|332010597|gb|AED97980.1| RAB GTPase homolog H1A [Arabidopsis thaliana]
Length = 213
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/206 (75%), Positives = 173/206 (83%), Gaps = 8/206 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW------ 63
YKLVFLGDQ VGKTSIIT FMY KFDT+YQATIGIDFLSKT EDRT RLQLW
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSL 67
Query: 64 -DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
DTAGQERF+SL+PSYIRDSSVAVIVYDVA++QSF+NTS+WIEEVR ERG VIIVLVGN
Sbjct: 68 GDTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGN 127
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLV+KRQVSIEEG+ KA+EFG +F+ETSAKAGFNIKPLF KI +AL G E +S TKQE
Sbjct: 128 KTDLVNKRQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQE 187
Query: 183 DMVDVNLKPTVNSSQ-TEQQGGGCAC 207
D+VDVNLKP + SSQ QQ C+C
Sbjct: 188 DLVDVNLKPLMFSSQANHQQESNCSC 213
>gi|54696262|gb|AAV38503.1| RAB6A, member RAS oncogene family [synthetic construct]
Length = 209
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFL +QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLVEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTRDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|51480434|gb|AAH80215.1| Rab6b protein [Danio rerio]
Length = 207
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME++ T +E M
Sbjct: 128 DLADKRQITIEEGEQRAKELSVMFIETSAKTGCNVKQLFRRVAAALPGMESMQETSKEGM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L TE GGC+C
Sbjct: 188 IDIKLDKPQEPPTTE---GGCSC 207
>gi|237829989|ref|XP_002364292.1| RAB6 protein [Toxoplasma gondii ME49]
gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gondii]
gi|211961956|gb|EEA97151.1| RAB6 protein [Toxoplasma gondii ME49]
gi|221507160|gb|EEE32764.1| RAB6 protein, putative [Toxoplasma gondii VEG]
Length = 209
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/206 (70%), Positives = 167/206 (81%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+V+ L KYKLVFLG+Q+VGKTSIITRFMYD FD YQATIGIDFLSKT+YLEDRTVRLQ
Sbjct: 4 ATVAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSS AV+VYD+ NR SFLNT++WIE+VR ERG DVII LVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL D+RQVS EEG KA+E +MF+ETSAKAG+NIK LFRK+A+ALPG+ET +
Sbjct: 124 NKTDLADRRQVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLASALPGLETQQTASD 183
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
MVDV L T + C+C
Sbjct: 184 AQMVDVQLNATPQQQDLTSKTSSCSC 209
>gi|226531121|ref|NP_001141348.1| uncharacterized protein LOC100273439 [Zea mays]
gi|194704110|gb|ACF86139.1| unknown [Zea mays]
Length = 190
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/170 (88%), Positives = 160/170 (94%), Gaps = 1/170 (0%)
Query: 39 QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFL 98
QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIV+DVA+RQSFL
Sbjct: 21 QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFL 80
Query: 99 NTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFN 158
NTS+WIEEVRTERG DVIIVLVGNKTDLVDKRQVSIEEG+GKAK+ GVMFIETSAKAGFN
Sbjct: 81 NTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFN 140
Query: 159 IKPLFRKIAAALPGMETLSSTKQEDMVDVNLKP-TVNSSQTEQQGGGCAC 207
IK LFRKIAAALPGMETLSS KQEDMVDVNL+ NSSQ++ Q GGC+C
Sbjct: 141 IKALFRKIAAALPGMETLSSAKQEDMVDVNLRSGNANSSQSQAQAGGCSC 190
>gi|410972687|ref|XP_003992789.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Felis catus]
Length = 208
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG Q VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGVQDVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|403175392|ref|XP_003334220.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171582|gb|EFP89801.2| rab family protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 310
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 170/203 (83%), Gaps = 7/203 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 113 LKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 172
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYDV NR SF+NTSRW+++VR ERG DVIIVLVGNKTDL
Sbjct: 173 GQERFRSLIPSYIRDSSVAVVVYDVTNRTSFINTSRWVDDVRAERGNDVIIVLVGNKTDL 232
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM--ETLSSTKQEDM 184
D+RQVS EE + K+KE VMFIETSAKAG N+K LF+KIA ALPGM E+ ++T
Sbjct: 233 GDRRQVSTEEAERKSKELDVMFIETSAKAGHNVKTLFKKIAQALPGMDSESQTTTPANQT 292
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DV++ PT N Q+ GCAC
Sbjct: 293 IDVSVSPTTNDQQS-----GCAC 310
>gi|49456921|emb|CAG46781.1| RAB6A [Homo sapiens]
Length = 208
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 172/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+++K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYDVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|409107174|pdb|4DKX|A Chain A, Crystal Structure Of The Rab 6a'(Q72l)
gi|409107175|pdb|4DKX|B Chain B, Crystal Structure Of The Rab 6a'(Q72l)
Length = 216
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAG ERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGLERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 189 IDIKLEKPQEQPVSE---GGCSC 208
>gi|417397129|gb|JAA45598.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFSSLIPSYIRDSTAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ E GGC+C
Sbjct: 189 IDIKLEKPQEQPVNE---GGCSC 208
>gi|348669592|gb|EGZ09414.1| hypothetical protein PHYSODRAFT_254677 [Phytophthora sojae]
Length = 202
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 167/204 (81%), Gaps = 2/204 (0%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++PLAKYKLVFLGDQ VGKTS+ITRFMYD FD YQATIGIDFLSKTMY+EDRTVRLQLW
Sbjct: 1 IAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAV+VYD+ NR SFLNTS+WIE+VRTERG DV+I+LVGNK
Sbjct: 61 DTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNK 120
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TD+ D+RQVSIEEG KAKE VMFIETSAKAG+NIK LFRK+A LPGME + +
Sbjct: 121 TDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSN 180
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
++D+ L T E C C
Sbjct: 181 LIDIKL--TAAPPPKENTAEQCNC 202
>gi|395335642|gb|AFN54651.1| Rab GTPase [Litopenaeus vannamei]
Length = 211
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 174/204 (85%), Gaps = 2/204 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDF SKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFXSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME + K+ DM
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEP-TDNKKVDM 187
Query: 185 VDVNLKPTVNSSQTEQQG-GGCAC 207
+V L+ + N+++ + GGCAC
Sbjct: 188 TEVVLRDSENAAEIGRTADGGCAC 211
>gi|313232635|emb|CBY19305.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 172/208 (82%), Gaps = 5/208 (2%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
SV PL KYK+VFLG QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 7 SVKPLRKYKVVFLGKQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQL 66
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAG ERFRSLIPSYIRDS+VAV+VYDVAN SF TS+WI++VR ERG DVII+LVGN
Sbjct: 67 WDTAGHERFRSLIPSYIRDSTVAVVVYDVANVNSFQQTSKWIDDVRAERGTDVIIMLVGN 126
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL DKRQVS++EG+ KA E VMFIETSAK G+N+K LFR++AAALPGME +E
Sbjct: 127 KTDLSDKRQVSVDEGERKAAELKVMFIETSAKTGYNVKQLFRRVAAALPGMEV--KEDKE 184
Query: 183 DMVDVNLKPTV---NSSQTEQQGGGCAC 207
++V+VNL+ NSS ++ GGC C
Sbjct: 185 NLVEVNLQKHQSQDNSSSAIKEAGGCQC 212
>gi|405963194|gb|EKC28791.1| Ras-related protein Rab-6B [Crassostrea gigas]
Length = 209
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 173/203 (85%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME + K+ +M
Sbjct: 129 DLSDKRQITTEEGERKAKELSVMFIETSAKAGYNVKQLFRRVAAALPGMEQ-TEPKKGEM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T + E + GGC+C
Sbjct: 188 TEVKLKDT-GPIEPEHKEGGCSC 209
>gi|345494735|ref|XP_001604718.2| PREDICTED: ras-related protein Rab-6A-like [Nasonia vitripennis]
Length = 209
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 150/206 (72%), Positives = 174/206 (84%), Gaps = 8/206 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPT---VNSSQTEQQGGGCAC 207
+V LK T +N+S++ CAC
Sbjct: 189 QEVVLKDTPIELNASES-----SCAC 209
>gi|114052691|ref|NP_001040270.1| ras small monomeric GTPase Rab6 [Bombyx mori]
gi|87248577|gb|ABD36341.1| ras small monomeric GTPase Rab6 [Bombyx mori]
Length = 209
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 170/203 (83%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEGD KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLSDKRQVSTEEGDKKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V L+ + ++Q C C
Sbjct: 189 HEVILRQS--PGDNKEQDSSCVC 209
>gi|291399811|ref|XP_002716636.1| PREDICTED: RAB6B, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 208
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME++ +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMESVQEKSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L +E GGC+C
Sbjct: 189 IDIKLDKPQEPPASE---GGCSC 208
>gi|327267235|ref|XP_003218408.1| PREDICTED: ras-related protein Rab-6B-like [Anolis carolinensis]
Length = 208
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME++ +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVASALPGMESVQEKSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L +E GGC+C
Sbjct: 189 IDIKLDKPQEPPASE---GGCSC 208
>gi|209735274|gb|ACI68506.1| Ras-related protein Rab-6B [Salmo salar]
Length = 208
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 171/203 (84%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRT RG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTGRGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGME++ T +E M
Sbjct: 129 DLGDKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQETSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ + TE GGC+C
Sbjct: 189 IDIKMDKPQEPQTTE---GGCSC 208
>gi|357017139|gb|AET50598.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/207 (70%), Positives = 167/207 (80%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M + L KYKLVFLG+Q+VGKTSIITRFMYD FD YQATIGIDFLSKT+YLEDRTVRL
Sbjct: 1 MTDTAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSS AV+VYD+ NR SF+NT++WIE+V ERG DV+I LV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFINTTKWIEDVWAERGKDVVIALV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL D+RQVS EEG+ KA+E G++FIETSAKAG N+K LFRK+AAALPG+ET S
Sbjct: 121 GNKTDLSDRRQVSPEEGEQKAREQGILFIETSAKAGHNVKTLFRKLAAALPGLETQQSAS 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
MVDV L T ++ GC+C
Sbjct: 181 DAQMVDVQLNATPQQQDLSRKASGCSC 207
>gi|196002958|ref|XP_002111346.1| rab6 [Trichoplax adhaerens]
gi|190585245|gb|EDV25313.1| rab6 [Trichoplax adhaerens]
Length = 208
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 171/204 (83%), Gaps = 5/204 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+V+D+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVFDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQED 183
DL DKRQVS EEG+ KAKE VMFIETSAKAG N+K LFR++AAALPGME+ S K+ D
Sbjct: 129 DLADKRQVSTEEGENKAKELNVMFIETSAKAGHNVKQLFRRVAAALPGMESAQDSGKRGD 188
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
VD+ PT ++ GGC+C
Sbjct: 189 QVDLQPHPTDDTPSE----GGCSC 208
>gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus]
Length = 212
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 172/203 (84%), Gaps = 1/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIVLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ + K+ DM
Sbjct: 127 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMES-TENKKVDM 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V L+ + N++ + G C
Sbjct: 186 TEVVLRDSENAADIGRTADGGMC 208
>gi|432853316|ref|XP_004067647.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGME++ +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESVQEPSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L TE G C+C
Sbjct: 189 IDIKLDKPQEPQTTE---GSCSC 208
>gi|221487362|gb|EEE25594.1| RAB6 protein, putative [Toxoplasma gondii GT1]
Length = 234
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 166/205 (80%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
+V+ L KYKLVFLG+Q+VGKTSIITRFMYD FD YQATIGIDFLSKT+YLEDRTVRLQL
Sbjct: 30 AVAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQL 89
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSS AV+VYD+ NR SFLNT++WIE+VR ERG DVII LVGN
Sbjct: 90 WDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVGN 149
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL D+RQVS EEG KA+E +MF+ETSAKAG+NIK LFRK+A+ALPG+ET +
Sbjct: 150 KTDLADRRQVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLASALPGLETQQTASDA 209
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
MVDV L T + C+C
Sbjct: 210 QMVDVQLNATPQQQDLTSKTSSCSC 234
>gi|242005911|ref|XP_002423803.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507019|gb|EEB11065.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 209
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 170/203 (83%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG KAKE V FIETSAKAG+N+K LFR++AAALPGM++ + ED
Sbjct: 129 DLSDKRQVSSEEGVKKAKELNVKFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDR 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T N Q + GGCAC
Sbjct: 189 QEVILKDTPNQVQNPE--GGCAC 209
>gi|240848863|ref|NP_001155439.1| rab6-like [Acyrthosiphon pisum]
gi|239788473|dbj|BAH70916.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 209
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 170/203 (83%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV E+G+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM+ + EDM
Sbjct: 129 DLTDKRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDVAENRPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T N + ++ CAC
Sbjct: 189 QEVVLKDTPNDAANPEK--SCAC 209
>gi|440793018|gb|ELR14219.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 195
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/176 (80%), Positives = 162/176 (92%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA +PLAKYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MAGSNPLAKYKLVFLGDQSVGKTSIITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDSSVA++VYD+ NR +FL+T+RW+E++R ERG DVI++LV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNRTTFLDTARWVEDIRAERGNDVILMLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
GNKTDL DKR VS EEG+ KAKEFG MFIETSAKAG+N+KPLFR++AAALPG++ +
Sbjct: 121 GNKTDLADKRCVSAEEGESKAKEFGAMFIETSAKAGYNVKPLFRQVAAALPGIDPI 176
>gi|30424655|ref|NP_776142.1| ras-related protein Rab-6B [Mus musculus]
gi|96975097|ref|NP_057661.3| ras-related protein Rab-6B [Homo sapiens]
gi|155371985|ref|NP_001094599.1| ras-related protein Rab-6B [Bos taurus]
gi|386781658|ref|NP_001248165.1| ras-related protein Rab-6B [Macaca mulatta]
gi|126325809|ref|XP_001364646.1| PREDICTED: ras-related protein Rab-6B-like [Monodelphis domestica]
gi|296228059|ref|XP_002759647.1| PREDICTED: ras-related protein Rab-6B [Callithrix jacchus]
gi|297672009|ref|XP_002814108.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pongo abelii]
gi|301777392|ref|XP_002924114.1| PREDICTED: ras-related protein Rab-6B-like [Ailuropoda melanoleuca]
gi|311269411|ref|XP_003132476.1| PREDICTED: ras-related protein Rab-6B-like [Sus scrofa]
gi|348582027|ref|XP_003476778.1| PREDICTED: ras-related protein Rab-6B-like [Cavia porcellus]
gi|395519193|ref|XP_003763735.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Sarcophilus
harrisii]
gi|395832821|ref|XP_003789452.1| PREDICTED: ras-related protein Rab-6B [Otolemur garnettii]
gi|397503903|ref|XP_003822554.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Pan paniscus]
gi|402861531|ref|XP_003895143.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Papio anubis]
gi|403265826|ref|XP_003925113.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Saimiri
boliviensis boliviensis]
gi|426218278|ref|XP_004003376.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Ovis aries]
gi|426342170|ref|XP_004036386.1| PREDICTED: ras-related protein Rab-6B isoform 1 [Gorilla gorilla
gorilla]
gi|13633595|sp|Q9NRW1.1|RAB6B_HUMAN RecName: Full=Ras-related protein Rab-6B
gi|47117095|sp|P61294.1|RAB6B_MOUSE RecName: Full=Ras-related protein Rab-6B
gi|229891504|sp|A6QR46.1|RAB6B_BOVIN RecName: Full=Ras-related protein Rab-6B
gi|7385001|gb|AAF61637.1|AF166492_1 small GTPase RAB6B [Homo sapiens]
gi|20379056|gb|AAM21088.1|AF498940_1 small GTP binding protein RAB6B [Homo sapiens]
gi|12803379|gb|AAH02510.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|26331000|dbj|BAC29230.1| unnamed protein product [Mus musculus]
gi|30583365|gb|AAP35927.1| RAB6B, member RAS oncogene family [Homo sapiens]
gi|38148674|gb|AAH60618.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|60655043|gb|AAX32085.1| RAB6B [synthetic construct]
gi|112292963|dbj|BAF02859.1| Rab6B [Mus musculus]
gi|119599564|gb|EAW79158.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119599565|gb|EAW79159.1| RAB6B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148689117|gb|EDL21064.1| RAB6B, member RAS oncogene family [Mus musculus]
gi|151557109|gb|AAI50112.1| RAB6B protein [Bos taurus]
gi|168279011|dbj|BAG11385.1| Ras-related protein Rab-6B [synthetic construct]
gi|189065457|dbj|BAG35296.1| unnamed protein product [Homo sapiens]
gi|190690565|gb|ACE87057.1| RAB6B, member RAS oncogene family protein [synthetic construct]
gi|296490967|tpg|DAA33065.1| TPA: ras-related protein Rab-6B [Bos taurus]
gi|380783157|gb|AFE63454.1| ras-related protein Rab-6B [Macaca mulatta]
gi|383408451|gb|AFH27439.1| ras-related protein Rab-6B [Macaca mulatta]
gi|384943778|gb|AFI35494.1| ras-related protein Rab-6B [Macaca mulatta]
gi|410206664|gb|JAA00551.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410261278|gb|JAA18605.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410287730|gb|JAA22465.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|410328335|gb|JAA33114.1| RAB6B, member RAS oncogene family [Pan troglodytes]
gi|417397131|gb|JAA45599.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME + +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L +E GGC+C
Sbjct: 189 IDIKLDKPQEPPASE---GGCSC 208
>gi|383848737|ref|XP_003700004.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 171/203 (84%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNPNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLSDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T + + CAC
Sbjct: 189 QEVVLKDT--PIELKASESSCAC 209
>gi|156717362|ref|NP_001096221.1| uncharacterized protein LOC100124772 [Xenopus (Silurana)
tropicalis]
gi|111309029|gb|AAI21384.1| LOC100124772 protein [Xenopus (Silurana) tropicalis]
Length = 210
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGM++ +EDM
Sbjct: 131 DLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDM 190
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ TE GC+C
Sbjct: 191 IDIKLEKPPEQPVTE---SGCSC 210
>gi|48096836|ref|XP_392533.1| PREDICTED: ras-related protein Rab-6A [Apis mellifera]
gi|380012436|ref|XP_003690289.1| PREDICTED: ras-related protein Rab-6A-like [Apis florea]
Length = 209
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 172/203 (84%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T ++ + CAC
Sbjct: 189 QEVVLKDTPIELKSSE--SSCAC 209
>gi|307189589|gb|EFN73950.1| Ras-related protein Rab-6A [Camponotus floridanus]
gi|307196069|gb|EFN77792.1| Ras-related protein Rab-6A [Harpegnathos saltator]
gi|332025967|gb|EGI66120.1| Ras-related protein Rab-6A [Acromyrmex echinatior]
Length = 209
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 170/203 (83%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T + + CAC
Sbjct: 189 QEVVLKDT--PIELKASESSCAC 209
>gi|340718722|ref|XP_003397812.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Bombus
terrestris]
gi|350409818|ref|XP_003488853.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Bombus
impatiens]
Length = 209
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 171/203 (84%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ + EDM
Sbjct: 129 DLGDKRQVSMEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPEDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V LK T + + CAC
Sbjct: 189 QEVVLKDT--PIELKASESSCAC 209
>gi|50927456|gb|AAH78662.1| RAB6B protein [Homo sapiens]
Length = 208
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 169/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+L GNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLAGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME + +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L +E GGC+C
Sbjct: 189 IDIKLDKPQEPPASE---GGCSC 208
>gi|391348759|ref|XP_003748610.1| PREDICTED: ras-related protein Rab-6A-like [Metaseiulus
occidentalis]
Length = 207
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 173/203 (85%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGTDVIIMLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQVS E+G+ KAKE VMFIETSAK+G+N+K LFR++A ALPGME +KQ D+
Sbjct: 128 DLSEKRQVSTEDGEKKAKELQVMFIETSAKSGYNVKQLFRRVANALPGMENTERSKQ-DI 186
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VDV+LK + ++ GGCAC
Sbjct: 187 VDVDLKD--GPIEQPKEDGGCAC 207
>gi|167013419|pdb|3BBP|A Chain A, Rab6-Gtp:gcc185 Rab Binding Domain Complex
gi|167013420|pdb|3BBP|B Chain B, Rab6-Gtp:gcc185 Rab Binding Domain Complex
gi|167013421|pdb|3BBP|C Chain C, Rab6-Gtp:gcc185 Rab Binding Domain Complex
Length = 211
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 170/201 (84%), Gaps = 3/201 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAG ERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 132 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGC 205
+D+ L+ +E GGC
Sbjct: 192 IDIKLEKPQEQPVSE---GGC 209
>gi|325188888|emb|CCA23418.1| Rab6 family GTPase putative [Albugo laibachii Nc14]
Length = 248
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 169/204 (82%), Gaps = 2/204 (0%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++PL+KYK+VFLGDQ VGKTS+ITRFMYD FD YQATIGIDFLSKTMY+EDRTVRLQLW
Sbjct: 47 ITPLSKYKIVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLW 106
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAV+VYD+ NR SFLNT +WIE+VRTERG DV+I+LVGNK
Sbjct: 107 DTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTIKWIEDVRTERGQDVVIMLVGNK 166
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TD+ D+RQV++EEG KA + V+FIE+SAKAG+NIKPLFRK+A LPGME ++ +
Sbjct: 167 TDISDRRQVTVEEGTEKATQENVLFIESSAKAGYNIKPLFRKLAVMLPGMENATNNGDAN 226
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
++D+ L T + E CAC
Sbjct: 227 LIDIKL--TAAPAPKEATTNSCAC 248
>gi|410915366|ref|XP_003971158.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Takifugu
rubripes]
Length = 208
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ +AKE V+FIETSAKAG+N+K LFR++AAALPGM+T +EDM
Sbjct: 129 DLADKRQITTEEGEQRAKEMSVLFIETSAKAGYNVKQLFRRVAAALPGMDTTQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ E GGC+C
Sbjct: 189 IDIKLEKPPELPANE---GGCSC 208
>gi|330792608|ref|XP_003284380.1| Rab GTPase [Dictyostelium purpureum]
gi|325085726|gb|EGC39128.1| Rab GTPase [Dictyostelium purpureum]
Length = 206
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 147/206 (71%), Positives = 171/206 (83%), Gaps = 2/206 (0%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+ L+KYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 1 MESLSKYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVA++VYD+ N+ SFLNT +WIE+VR ERG +V+I+LVGNK
Sbjct: 61 DTAGQERFRSLIPSYIRDSSVAIVVYDITNKNSFLNTIKWIEDVRNERGNNVVIMLVGNK 120
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK--Q 181
TDL DKRQVSIEEG+ KA+E+ +MF ETSAKAGFNIK LFRK+A+ALPG+++ S TK
Sbjct: 121 TDLADKRQVSIEEGEAKAQEYDIMFTETSAKAGFNIKALFRKVASALPGIDSNSMTKGQH 180
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
E + +V++ T S G C
Sbjct: 181 EIISEVDISDTSKQSAAANNGYCERC 206
>gi|47228262|emb|CAG07657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 169/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANSEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L + E GGC+C
Sbjct: 189 IDIKLDKPAEPTVPE---GGCSC 208
>gi|313239407|emb|CBY14345.1| unnamed protein product [Oikopleura dioica]
Length = 210
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 169/204 (82%), Gaps = 2/204 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYDV N SF T++WI++VRTERG DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDVTNINSFNQTNKWIDDVRTERGTDVIIVLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED- 183
DL DKRQVSI+EG+ KAKE VMFIETSAK G+N+K LFR++AAALPGME T +
Sbjct: 128 DLADKRQVSIDEGERKAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMEPKEQTSADSG 187
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
M D+ LKP N + G C+C
Sbjct: 188 MQDIRLKPLPNPENPPGE-GNCSC 210
>gi|77681452|ref|NP_001029351.1| ras-related protein Rab-6B [Danio rerio]
gi|71682167|gb|AAI00012.1| RAB6B, member RAS oncogene family [Danio rerio]
Length = 215
Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 172/210 (81%), Gaps = 10/210 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV------ 58
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLGVSDLQ 68
Query: 59 -RLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
RLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII
Sbjct: 69 ARLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGME++
Sbjct: 129 MLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESMQ 188
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
T +E M+D+ L TE GGC+C
Sbjct: 189 ETSKEGMIDIKLDKPQEPPTTE---GGCSC 215
>gi|213424141|pdb|3CWZ|A Chain A, Strucure Of Rab6(Gtp)-R6ip1 Complex
Length = 188
Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 143/186 (76%), Positives = 165/186 (88%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 2 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAG ERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 62 TAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 121
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 122 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 181
Query: 185 VDVNLK 190
+D+ L+
Sbjct: 182 IDIKLE 187
>gi|410924265|ref|XP_003975602.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Takifugu
rubripes]
gi|225706442|gb|ACO09067.1| Ras-related protein Rab-6B [Osmerus mordax]
Length = 208
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 169/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L + E GGC+C
Sbjct: 189 IDIKLDKPAEPTVPE---GGCSC 208
>gi|432877569|ref|XP_004073164.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 211
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGM++ +EDM
Sbjct: 132 DLADKRQITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSAPEKSKEDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + TE C+C
Sbjct: 192 IDIKLERQPEMTVTE---SSCSC 211
>gi|348515485|ref|XP_003445270.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Oreochromis
niloticus]
gi|410913475|ref|XP_003970214.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Takifugu
rubripes]
Length = 211
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+AN SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+E + KA+E VM+IETSAKAG+N+K LFR++AAALPGM++ +EDM
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + TE C+C
Sbjct: 192 IDIKLEKQPEMTVTE---SSCSC 211
>gi|387018010|gb|AFJ51123.1| ras-related protein Rab-6A-like [Crotalus adamanteus]
Length = 212
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 169/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 13 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 72
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 73 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 132
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGM+ ++DM
Sbjct: 133 DLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDNAPEKSKDDM 192
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ TE GC+C
Sbjct: 193 IDIKLEKPPEQPVTEN---GCSC 212
>gi|296415924|ref|XP_002837633.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633511|emb|CAZ81824.1| unnamed protein product [Tuber melanosporum]
Length = 208
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 170/203 (83%), Gaps = 4/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ NR SF NT++W+++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITNRTSFQNTTKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ EEG+ KAKEF VMFIETSAKAG N+K LF++IA ALPGME + +M
Sbjct: 130 DLNDKRQVTTEEGEKKAKEFKVMFIETSAKAGHNVKTLFKRIAQALPGMEGTLNEPNSEM 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
++V+ ++ + + Q G C+C
Sbjct: 190 INVD----IDRNDSTQADGSCSC 208
>gi|348515487|ref|XP_003445271.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Oreochromis
niloticus]
gi|410913473|ref|XP_003970213.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Takifugu
rubripes]
Length = 211
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+E + KA+E VM+IETSAKAG+N+K LFR++AAALPGM++ +EDM
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + TE C+C
Sbjct: 192 IDIKLEKQPEMTVTE---SSCSC 211
>gi|432877573|ref|XP_004073166.1| PREDICTED: ras-related protein Rab-6B-like isoform 3 [Oryzias
latipes]
Length = 211
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+AN SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+E + KA+E VM+IETSAKAG+N+K LFR++AAALPGM++ +EDM
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSAPEKSKEDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + TE C+C
Sbjct: 192 IDIKLERQPEMTVTE---SSCSC 211
>gi|61806504|ref|NP_001013485.1| ras-related protein Rab-6B [Danio rerio]
gi|60552244|gb|AAH91529.1| Zgc:112018 [Danio rerio]
Length = 208
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNINSFQLTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME+L +E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAALPGMESLDDNNKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L + TE GC+C
Sbjct: 189 IDIKLDKQPDPPATE---SGCSC 208
>gi|351696990|gb|EHA99908.1| Ras-related protein Rab-6A [Heterocephalus glaber]
Length = 207
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 170/203 (83%), Gaps = 4/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LF + AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFCR-AAALPGMESTQDRSREDM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ TE GGC+C
Sbjct: 188 IDIKLEKPQEQPVTE---GGCSC 207
>gi|321471489|gb|EFX82462.1| hypothetical protein DAPPUDRAFT_128059 [Daphnia pulex]
Length = 208
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/205 (72%), Positives = 172/205 (83%), Gaps = 7/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KA+E VMFIETSAKAG+N+K LFR++AAALPGME ED+
Sbjct: 129 DLSDKRQVSTEEGERKARELNVMFIETSAKAGYNVKQLFRRVAAALPGMEA-DKKPPEDI 187
Query: 185 VDVNLKPTVNSSQTEQQG--GGCAC 207
+++L N++ E + GGCAC
Sbjct: 188 TEIDL----NNAPVELKPAEGGCAC 208
>gi|66911325|gb|AAH97051.1| Zgc:63637 protein [Danio rerio]
Length = 211
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+AN SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSAAAVVVYDIANLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+E + KA+E GVM+IETSAKAG+N+K LFR++AAALPGM++ +EDM
Sbjct: 132 DLGDKRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ TE C+C
Sbjct: 192 IDIKLEKPPELPVTE---SSCSC 211
>gi|432877571|ref|XP_004073165.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 211
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+E + KA+E VM+IETSAKAG+N+K LFR++AAALPGM++ +EDM
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVKQLFRRVAAALPGMDSAPEKSKEDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ + TE C+C
Sbjct: 192 IDIKLERQPEMTVTE---SSCSC 211
>gi|158254057|gb|AAI54222.1| Zgc:63637 [Danio rerio]
Length = 211
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 170/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+E + KA+E GVM+IETSAKAG+N+K LFR++AAALPGM++ +EDM
Sbjct: 132 DLGDKRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ TE C+C
Sbjct: 192 IDIKLEKPPELPVTE---SSCSC 211
>gi|348501270|ref|XP_003438193.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oreochromis
niloticus]
Length = 208
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T +WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L + E GGC+C
Sbjct: 189 IDIKLDKPAEPAVPE---GGCSC 208
>gi|47087033|ref|NP_998530.1| ras-related protein Rab-6A [Danio rerio]
gi|34784020|gb|AAH58059.1| Zgc:63637 [Danio rerio]
Length = 211
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 169/202 (83%), Gaps = 3/202 (1%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 13 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 72
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTD
Sbjct: 73 AGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD 132
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
L DKRQVS+E + KA+E GVM+IETSAKAG+N+K LFR++AAALPGM++ +EDM+
Sbjct: 133 LGDKRQVSVEAAEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDMI 192
Query: 186 DVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ TE C+C
Sbjct: 193 DIKLEKPPELPVTE---SSCSC 211
>gi|432916105|ref|XP_004079294.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T +WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 129 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAALPGMESLDDANPEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L + E GGC+C
Sbjct: 189 IDIKLDKPAEPTVPE---GGCSC 208
>gi|198430343|ref|XP_002121682.1| PREDICTED: similar to GTP-binding protein [Ciona intestinalis]
Length = 209
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 173/204 (84%), Gaps = 4/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAK G+N+K LFR++AAALPGME S K++++
Sbjct: 127 DLSDKRQVSIEEGERKAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMEN-SPDKEKNV 185
Query: 185 VD---VNLKPTVNSSQTEQQGGGC 205
+D ++ KP +Q+ + GC
Sbjct: 186 MDEVILDRKPQPEPTQSSESMCGC 209
>gi|432898518|ref|XP_004076541.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 169/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ +AKE V+FIETSAK G+N+K LFR++AAALPGM+T +EDM
Sbjct: 129 DLADKRQITTEEGEQRAKEMNVLFIETSAKTGYNVKQLFRRVAAALPGMDTSQDKSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E G C+C
Sbjct: 189 IDIKLEKPPEQPASE---GSCSC 208
>gi|294951515|ref|XP_002787019.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239901609|gb|EER18815.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 203
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 168/203 (82%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD+ YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 3 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDSNYQATIGIDFLSKTMYLEDRTVRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N+ SF+N +WI++VRTERG DVII+LVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVAVVVYDITNKASFMNCEKWIDDVRTERGNDVIIMLVGNKT 122
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE GVMF E SAKAG+NIK LFRK+AAALP + +Q +
Sbjct: 123 DLADKRQVSTEEGEQKAKEQGVMFTECSAKAGYNIKALFRKLAAALPQSNDQGAGQQGQI 182
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VD+ L + +S+ ++ CAC
Sbjct: 183 VDIQLNAS--NSEPQEHAKKCAC 203
>gi|326437703|gb|EGD83273.1| small GTP binding protein RAB6A [Salpingoeca sp. ATCC 50818]
Length = 207
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 SSLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ NR SF TSRWI++VR ERG DVII+LVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNRSSFQQTSRWIDDVRAERGQDVIIMLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSI+EG+ +AKE VMFIETSAKAG N+K LFR++A ALPGME S+ K D
Sbjct: 128 DLADKRQVSIDEGERRAKELNVMFIETSAKAGHNVKELFRRVAGALPGMEA-SAEKNLDQ 186
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
++K T Q Q+ GC+C
Sbjct: 187 ELTDVKLTETPEQPPQE--GCSC 207
>gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces pombe 972h-]
gi|134131|sp|P17608.1|RYH1_SCHPO RecName: Full=GTP-binding protein ryh1
gi|5077|emb|CAA36715.1| ryh1 [Schizosaccharomyces pombe]
gi|2330800|emb|CAB11173.1| GTPase Ryh1 [Schizosaccharomyces pombe]
Length = 201
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 145/201 (72%), Positives = 165/201 (82%), Gaps = 8/201 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD+FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVA+IVYD+ N SF+NT +WIE+VR ERG DVIIVLVGNKTDL
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDL 128
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQV+ EEG+ KAKE +M +ETSAKAG N+K LFRKIA LPGME + T+ M+D
Sbjct: 129 ADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENV-ETQSTQMID 187
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
V+++P N S C C
Sbjct: 188 VSIQPNENES-------SCNC 201
>gi|428180040|gb|EKX48909.1| hypothetical protein GUITHDRAFT_151724 [Guillardia theta CCMP2712]
Length = 207
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 167/205 (81%), Gaps = 3/205 (1%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
+ PLAKYKLVFLGDQSVGKTSIITRFMYDKFD+TYQATIGIDFLSKTMYL+DR VRLQL
Sbjct: 6 AAPPLAKYKLVFLGDQSVGKTSIITRFMYDKFDSTYQATIGIDFLSKTMYLDDRVVRLQL 65
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAVIVYDV NR+SF N +WI+EVR ERG DVI+ LVGN
Sbjct: 66 WDTAGQERFRSLIPSYIRDSSVAVIVYDVTNRESFDNAGKWIDEVRQERGEDVILALVGN 125
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL +KR+V+ EEG+ KAK F ++F+ETSAKAG N+K LFR++A LPG E + K
Sbjct: 126 KTDLAEKRRVTREEGEEKAKSFKILFVETSAKAGLNVKSLFRQLAQQLPGAENAAVKKDS 185
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
++V+V L SQ + G C+C
Sbjct: 186 ELVEVKLD---TPSQQKNPSGACSC 207
>gi|327277372|ref|XP_003223439.1| PREDICTED: ras-related protein Rab-6A-like [Anolis carolinensis]
Length = 215
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 169/203 (83%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 16 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 75
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AVIV+D+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 76 TAGQERFRSLIPSYIRDSAAAVIVFDLTNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 135
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGM++ ++DM
Sbjct: 136 DLADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKDDM 195
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GC+C
Sbjct: 196 IDIKLEKPPEQPVSE---SGCSC 215
>gi|239788471|dbj|BAH70915.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 210
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 166/203 (81%), Gaps = 1/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV E+G+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM+ + ED
Sbjct: 129 DLTDKRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDVAENRPPEDT 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VD+ N +++ C C
Sbjct: 189 VDLQ-NHAANQGDSQEFESSCMC 210
>gi|393910638|gb|EJD75978.1| Ras-like protein [Loa loa]
Length = 207
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/203 (72%), Positives = 166/203 (81%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR+IA ALPG+E K DM
Sbjct: 127 DLADKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIEADQRDKH-DM 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+V L Q + Q GC C
Sbjct: 186 QEVKLSD-APIRQVQMQESGCWC 207
>gi|432853320|ref|XP_004067649.1| PREDICTED: ras-related protein Rab-6B-like isoform 3 [Oryzias
latipes]
Length = 215
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 170/210 (80%), Gaps = 10/210 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVR----- 59
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVR
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRIRSTA 68
Query: 60 --LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
LQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII
Sbjct: 69 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGME++
Sbjct: 129 MLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESVQ 188
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+E M+D+ L TE G C+C
Sbjct: 189 EPSKEGMIDIKLDKPQEPQTTE---GSCSC 215
>gi|432853318|ref|XP_004067648.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 215
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 170/210 (80%), Gaps = 10/210 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT------- 57
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLSLSEPQ 68
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
VRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII
Sbjct: 69 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTAKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGME++
Sbjct: 129 MLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMESVQ 188
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+E M+D+ L TE G C+C
Sbjct: 189 EPSKEGMIDIKLDKPQEPQTTE---GSCSC 215
>gi|148227273|ref|NP_001090835.1| RAB6B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|110645498|gb|AAI18790.1| rab6b protein [Xenopus (Silurana) tropicalis]
Length = 208
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 169/204 (82%), Gaps = 5/204 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IE G+ KAKE VMFIETSAK G+N+K LFR++A+ALPGME ++ M
Sbjct: 129 DLADKRQITIEAGEQKAKELNVMFIETSAKTGYNVKQLFRRVASALPGMECSEEKSKDGM 188
Query: 185 VDVNL-KPTVNSSQTEQQGGGCAC 207
+D+ L KP + + GC+C
Sbjct: 189 IDIKLDKP----QEPQVADAGCSC 208
>gi|320166564|gb|EFW43463.1| RAB6A [Capsaspora owczarzaki ATCC 30864]
Length = 223
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/186 (76%), Positives = 166/186 (89%), Gaps = 1/186 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P+ K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 21 NPMRKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 80
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ NR SF T++WI++VR ERG DVII+LVGNKT
Sbjct: 81 TAGQERFRSLIPSYIRDSSVAVVVYDITNRNSFQQTTKWIDDVRAERGNDVIIMLVGNKT 140
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME-TLSSTKQED 183
DL DKRQVSIEEG+ K+KE VMFIETSAKAG+N+K LFR++AAALPGME + ++D
Sbjct: 141 DLGDKRQVSIEEGEAKSKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEASPDKPNKDD 200
Query: 184 MVDVNL 189
+VDV L
Sbjct: 201 LVDVKL 206
>gi|440895300|gb|ELR47529.1| Ras-related protein Rab-6B [Bos grunniens mutus]
Length = 207
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 169/203 (83%), Gaps = 4/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K FR++A+ALPGME + +E M
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQ-FRRVASALPGMENVQEKSKEGM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L +E GGC+C
Sbjct: 188 IDIKLDKPQEPPASE---GGCSC 207
>gi|339236385|ref|XP_003379747.1| GTP-binding protein Ryh1 [Trichinella spiralis]
gi|316977574|gb|EFV60659.1| GTP-binding protein Ryh1 [Trichinella spiralis]
Length = 207
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/203 (71%), Positives = 169/203 (83%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG ++K LFR++AAALPGM+ + +D+
Sbjct: 127 DLSDKRQVSSEEGERKAKELNVMFIETSAKAGLHVKQLFRRVAAALPGMDETPTRPTQDV 186
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V ++ + V S Q GGC C
Sbjct: 187 VRISTQNDVKSQGL--QDGGCWC 207
>gi|449498485|ref|XP_004177271.1| PREDICTED: ras-related protein Rab-6A-like [Taeniopygia guttata]
Length = 211
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/202 (69%), Positives = 167/202 (82%), Gaps = 3/202 (1%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P ++KLV LG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 13 PAQEFKLVSLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 72
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTD
Sbjct: 73 AGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD 132
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
L DKRQ++ EEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGM++ +EDM+
Sbjct: 133 LADKRQITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDMI 192
Query: 186 DVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ TE GC+C
Sbjct: 193 DIKLEKPPEQPVTE---SGCSC 211
>gi|148233560|ref|NP_001086132.1| RAB6B, member RAS oncogene family [Xenopus laevis]
gi|49257610|gb|AAH74238.1| MGC83971 protein [Xenopus laevis]
Length = 208
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 170/204 (83%), Gaps = 5/204 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ KAK+ VM+IETSAK G+N+K LFR++A+ALPGME ++ M
Sbjct: 129 DLADKRQITIEEGEQKAKDLNVMYIETSAKTGYNVKQLFRRVASALPGMECSEEKSKDGM 188
Query: 185 VDVNL-KPTVNSSQTEQQGGGCAC 207
+D+ L KP + + GC+C
Sbjct: 189 IDIKLDKP----QEPQVADAGCSC 208
>gi|318054582|ref|NP_001187853.1| ras-related protein Rab-6B [Ictalurus punctatus]
gi|308324148|gb|ADO29209.1| ras-related protein rab-6b [Ictalurus punctatus]
Length = 208
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 166/203 (81%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYDV N SF TS+WIE+VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDVTNVNSFQLTSKWIEDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQ+ +EEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME L +E M
Sbjct: 129 DLEEKRQILVEEGEQRAKELNVMFIETSAKTGTNVKQLFRRVAAALPGMENLDEMNKEGM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L +E C+C
Sbjct: 189 IDIKLDKVQEPPASE---SSCSC 208
>gi|449018630|dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [Cyanidioschyzon
merolae strain 10D]
Length = 211
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/206 (72%), Positives = 172/206 (83%), Gaps = 1/206 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + L+KYKLVFLGDQ+VGKTSIITRFMYDKFD YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 7 ATAAALSKYKLVFLGDQAVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQ 66
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV +R+SFLNT++WIEEVR ERG +VIIVLVG
Sbjct: 67 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVTSRRSFLNTAKWIEEVRNERGNEVIIVLVG 126
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK+D DKRQVS+EEG+ KAKE V+FIETSAK G N+K LFRKIAAALPG + +S
Sbjct: 127 NKSDQNDKRQVSVEEGEAKAKELDVLFIETSAKTGANVKALFRKIAAALPGSSSTTSRGS 186
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ ++DV L P ++ QQ C C
Sbjct: 187 Q-LIDVKLTPQEPAASPSQQSSSCLC 211
>gi|66828353|ref|XP_647531.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897470|sp|Q55FK2.1|RAB6_DICDI RecName: Full=Ras-related protein Rab-6
gi|60475552|gb|EAL73487.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/201 (71%), Positives = 168/201 (83%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
+ L+KYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 1 MESLSKYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVA++VYD+ N+ SF NT +WIE+VR ERG +V+I+LVGNK
Sbjct: 61 DTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVIMLVGNK 120
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDL DKRQVSIEEG+ KAKE+ +MF ETSAKAGFNIK LFRK+A+ALPG+++ S TK +
Sbjct: 121 TDLADKRQVSIEEGEAKAKEYDIMFTETSAKAGFNIKALFRKVASALPGIDSNSMTKNQH 180
Query: 184 MVDVNLKPTVNSSQTEQQGGG 204
+ + T ++G G
Sbjct: 181 EIISEVDITDGGKPALKEGDG 201
>gi|213410657|ref|XP_002176098.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
gi|212004145|gb|EEB09805.1| GTPase Ryh1 [Schizosaccharomyces japonicus yFS275]
Length = 201
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 167/201 (83%), Gaps = 8/201 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD+FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVA+IVYD+ N SF+NT +WI++VR ER DVIIVLVGNKTDL
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIDDVRAERSDDVIIVLVGNKTDL 128
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQVS+EEG+ KAKE G+M +ETSAKAG+N+K LFR+IA LPGME + T+ M+D
Sbjct: 129 AEKRQVSLEEGEQKAKELGIMHMETSAKAGYNVKQLFRRIAQMLPGMENV-DTQNTQMID 187
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
V+++P + S C C
Sbjct: 188 VSIQPNTDES-------SCNC 201
>gi|324525564|gb|ADY48564.1| Ras-related protein Rab-6.2 [Ascaris suum]
Length = 207
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 168/203 (82%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR+IA ALPG+E K ++
Sbjct: 127 DLADKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIEPDQKDKHDNP 186
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V + + P + + E + G C C
Sbjct: 187 V-IEIGP-IKPRKIETEEGSCWC 207
>gi|357619652|gb|EHJ72138.1| ras small monomeric GTPase Rab6 [Danaus plexippus]
Length = 208
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/181 (77%), Positives = 160/181 (88%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS E+GD KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ S ED
Sbjct: 129 DLSDKRQVSTEDGDRKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAESKPPEDS 188
Query: 185 V 185
+
Sbjct: 189 I 189
>gi|255953207|ref|XP_002567356.1| Pc21g02920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589067|emb|CAP95189.1| Pc21g02920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 208
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 171/213 (80%), Gaps = 11/213 (5%)
Query: 1 MASVS------PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLE 54
MAS S PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLE
Sbjct: 1 MASTSVGSYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLE 60
Query: 55 DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD 114
DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG D
Sbjct: 61 DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGND 120
Query: 115 VIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
VIIVLVGNKTDL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGME
Sbjct: 121 VIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGME 180
Query: 175 TLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + M+DVN+ P +S GCAC
Sbjct: 181 GEAKQGESTMIDVNISPKETTSND-----GCAC 208
>gi|392864275|gb|EAS34901.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 209
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 168/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G+N+K LFR+IA ALPGME + M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIAQALPGMEGEAGRGDNQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ PT S GCAC
Sbjct: 192 IDVNINPTQPVSNE-----GCAC 209
>gi|340370332|ref|XP_003383700.1| PREDICTED: ras-related protein Rab-6A-like [Amphimedon
queenslandica]
Length = 210
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 170/204 (83%), Gaps = 3/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF ++WIE+VR ERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFQQVNKWIEDVRAERGTDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QED 183
DL DKRQVS++EG+ KA+E GVMFIETSAKAG+N+K LFR++AAALPGME + ++D
Sbjct: 129 DLQDKRQVSMDEGERKAQELGVMFIETSAKAGYNVKQLFRRVAAALPGMENNQEKQNKDD 188
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
+V+V L N S +Q C C
Sbjct: 189 IVEVRLPE--NGSGEQQDENKCWC 210
>gi|443689406|gb|ELT91802.1| hypothetical protein CAPTEDRAFT_169557 [Capitella teleta]
Length = 213
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 166/187 (88%), Gaps = 2/187 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLED+T+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDKTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFQQTSKWIDDVRTERGTDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE GVMFIETSAKAG+N+K LFR++AAALPGME +TK ++
Sbjct: 129 DLSDKRQVSTEEGERKAKELGVMFIETSAKAGYNVKQLFRRVAAALPGMEQKEATKDDN- 187
Query: 185 VDVNLKP 191
++ L+P
Sbjct: 188 -NIVLEP 193
>gi|294881140|ref|XP_002769264.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|294956149|ref|XP_002788825.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239872542|gb|EER01982.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239904437|gb|EER20621.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 205
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 167/203 (82%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD+ YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 3 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDSNYQATIGIDFLSKTMYLEDRTVRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N+ SF+N +WI++VRTERG DVII+LVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVAVVVYDITNKASFMNCEKWIDDVRTERGNDVIIMLVGNKT 122
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE GVMF E SAKAG+NIK LFRK+AAALP + +Q
Sbjct: 123 DLADKRQVSTEEGEQKAKEQGVMFTECSAKAGYNIKALFRKLAAALPQSNDQGAGQQGQN 182
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V+++ ++S+ E+ CAC
Sbjct: 183 QIVDIQLNASNSEPEEHARKCAC 205
>gi|242818595|ref|XP_002487149.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713614|gb|EED13038.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 169/203 (83%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGME + + M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEAQRGENQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P+ ++ GCAC
Sbjct: 192 IDVNINPSQPTNND-----GCAC 209
>gi|425767204|gb|EKV05779.1| hypothetical protein PDIP_81350 [Penicillium digitatum Pd1]
gi|425769088|gb|EKV07595.1| hypothetical protein PDIG_72080 [Penicillium digitatum PHI26]
Length = 209
Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 168/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGME + + M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEAKQGESTM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P ++ GCAC
Sbjct: 192 IDVNISPKETTTND-----GCAC 209
>gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6 [Aspergillus fumigatus Af293]
gi|119481981|ref|XP_001261019.1| rab6 [Neosartorya fischeri NRRL 181]
gi|66853530|gb|EAL93854.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus
Af293]
gi|119409173|gb|EAW19122.1| rab6 [Neosartorya fischeri NRRL 181]
gi|159129947|gb|EDP55061.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus
A1163]
Length = 207
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/203 (70%), Positives = 169/203 (83%), Gaps = 6/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGME + ++ M
Sbjct: 131 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEG-EANRESQM 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P +S GCAC
Sbjct: 190 IDVNINPRETTSND-----GCAC 207
>gi|169762832|ref|XP_001727316.1| Ras-related protein Rab-6A [Aspergillus oryzae RIB40]
gi|238488653|ref|XP_002375564.1| RAS small monomeric GTPase Rab6, putative [Aspergillus flavus
NRRL3357]
gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697952|gb|EED54292.1| RAS small monomeric GTPase Rab6, putative [Aspergillus flavus
NRRL3357]
gi|391866828|gb|EIT76096.1| GTPase Rab6/YPT6/Ryh1, small G protein superfamily [Aspergillus
oryzae 3.042]
Length = 209
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 168/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGME S + +
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEGSRGESQV 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P ++ GCAC
Sbjct: 192 IDVNINPKETTTND-----GCAC 209
>gi|145251179|ref|XP_001397103.1| Ras-related protein Rab-6A [Aspergillus niger CBS 513.88]
gi|134082633|emb|CAK42527.1| unnamed protein product [Aspergillus niger]
gi|350636440|gb|EHA24800.1| hypothetical protein ASPNIDRAFT_40721 [Aspergillus niger ATCC 1015]
gi|358373872|dbj|GAA90468.1| secretion related GTPase C [Aspergillus kawachii IFO 4308]
Length = 209
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 168/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGME ++ M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEANRGDNQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P ++ GCAC
Sbjct: 192 IDVNITPKETTTND-----GCAC 209
>gi|258573301|ref|XP_002540832.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
gi|237901098|gb|EEP75499.1| GTP-binding protein ryh1 [Uncinocarpus reesii 1704]
Length = 210
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 168/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYL+DRTVRLQLWD
Sbjct: 13 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLDDRTVRLQLWD 72
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 73 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 132
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G+N+K LFR+IA ALPGME + M
Sbjct: 133 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIANALPGMEGEAGRGDNQM 192
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ PT S GCAC
Sbjct: 193 IDVNINPTQPVSND-----GCAC 210
>gi|410915368|ref|XP_003971159.1| PREDICTED: ras-related protein Rab-6A-like isoform 3 [Takifugu
rubripes]
Length = 220
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 170/215 (79%), Gaps = 15/215 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV------ 58
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTV
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVGAFVSA 68
Query: 59 ------RLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG 112
RLQLWDTAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG
Sbjct: 69 ATSLGIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG 128
Query: 113 GDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG 172
DVII+LVGNKTDL DKRQ++ EEG+ +AKE V+FIETSAKAG+N+K LFR++AAALPG
Sbjct: 129 SDVIIMLVGNKTDLADKRQITTEEGEQRAKEMSVLFIETSAKAGYNVKQLFRRVAAALPG 188
Query: 173 METLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
M+T +EDM+D+ L+ E GGC+C
Sbjct: 189 MDTTQDKSREDMIDIKLEKPPELPANE---GGCSC 220
>gi|388857378|emb|CCF49052.1| probable YPT6-GTP-binding protein of the rab family [Ustilago
hordei]
Length = 218
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 165/211 (78%), Gaps = 16/211 (7%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 15 PLRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDSSVAV+VYD+ NR SF NTS+W+++VR ERG DVIIVLVGNKTD
Sbjct: 75 AGQERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTD 134
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
L DKRQV+ +E + KA+EF VMFIETSAKAG N+K LF+KIA ALPGM+ K D+
Sbjct: 135 LSDKRQVTTDEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALPGMD-----KDSDV- 188
Query: 186 DVNLKPTVN---------SSQTEQQGGGCAC 207
N PT N + T G C C
Sbjct: 189 -ANAGPTANKNIDVTAPPAQTTMHDGSSCKC 218
>gi|343427853|emb|CBQ71379.1| probable YPT6-GTP-binding protein of the rab family [Sporisorium
reilianum SRZ2]
Length = 218
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/207 (70%), Positives = 164/207 (79%), Gaps = 8/207 (3%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDT
Sbjct: 15 PLRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDSSVAV+VYD+ NR SF NTS+W+++VR ERG DVIIVLVGNKTD
Sbjct: 75 AGQERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTD 134
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM- 184
L DKRQV+ EE + KA+EF VMFIETSAKAG N+K LF+KIA ALPGM+ +
Sbjct: 135 LSDKRQVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALPGMDKDADAANGGAA 194
Query: 185 ----VDVNLKPTVNSSQTEQQGGGCAC 207
+DV P + T + G C C
Sbjct: 195 ANKNIDVTAAP---AQTTMEDGSSCKC 218
>gi|212530474|ref|XP_002145394.1| RAS small monomeric GTPase Rab6, putative [Talaromyces marneffei
ATCC 18224]
gi|210074792|gb|EEA28879.1| RAS small monomeric GTPase Rab6, putative [Talaromyces marneffei
ATCC 18224]
Length = 209
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 169/203 (83%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGM+ + + M
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMDGEAQRGENQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P+ ++ GCAC
Sbjct: 192 IDVNINPSQPTNND-----GCAC 209
>gi|392572292|gb|EIW65444.1| hypothetical protein TREMEDRAFT_70574 [Tremella mesenterica DSM
1558]
Length = 216
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/206 (70%), Positives = 165/206 (80%), Gaps = 4/206 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+S +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 15 SSSNPLRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQ 74
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVIVYD+ NR SFLNTS+W+++VR ERG DVIIVLVG
Sbjct: 75 LWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRTSFLNTSKWVDDVRNERGQDVIIVLVG 134
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL DKRQV+ EE D +AKE GVM IETSAKAG N+K LF+KIA ALPG
Sbjct: 135 NKTDLNDKRQVTPEELDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGGAENKDAGG 194
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+DV + + + Q GC+C
Sbjct: 195 NQKIDV----SATTGEEPPQASGCSC 216
>gi|261193297|ref|XP_002623054.1| rab6 [Ajellomyces dermatitidis SLH14081]
gi|239588659|gb|EEQ71302.1| rab6 [Ajellomyces dermatitidis SLH14081]
gi|239614016|gb|EEQ91003.1| rab6 [Ajellomyces dermatitidis ER-3]
gi|327353362|gb|EGE82219.1| GTP-binding protein ryh1 [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 167/206 (81%), Gaps = 5/206 (2%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A +PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 9 AYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQ 68
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVG
Sbjct: 69 LWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVG 128
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGM+ +
Sbjct: 129 NKTDLNDKREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGA 188
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DVN+ PT S GCAC
Sbjct: 189 NQMIDVNINPTQPVSND-----GCAC 209
>gi|410924267|ref|XP_003975603.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Takifugu
rubripes]
Length = 219
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 169/214 (78%), Gaps = 14/214 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV------ 58
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTV
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVGNLDFR 68
Query: 59 -----RLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG 113
RLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG
Sbjct: 69 LSLQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGS 128
Query: 114 DVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DVII+LVGNKTDL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGM
Sbjct: 129 DVIIMLVGNKTDLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGM 188
Query: 174 ETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
E+L E M+D+ L + E GGC+C
Sbjct: 189 ESLDDANPEGMIDIKLDKPAEPTVPE---GGCSC 219
>gi|225558550|gb|EEH06834.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|240274987|gb|EER38502.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 209
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 166/203 (81%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGM+ + M
Sbjct: 132 DLNDKREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGANQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ PT S GCAC
Sbjct: 192 IDVNINPTQPVSND-----GCAC 209
>gi|301093026|ref|XP_002997362.1| Rab6 family GTPase, putative [Phytophthora infestans T30-4]
gi|262110760|gb|EEY68812.1| Rab6 family GTPase, putative [Phytophthora infestans T30-4]
Length = 238
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 164/204 (80%), Gaps = 6/204 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++PLAKYKLVFLGDQ VGKTS+ITRFMYD FD YQATIGIDFLSKTMY+EDRTVRLQLW
Sbjct: 41 IAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLW 100
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQ+ LIPSYIRDSSVAV+VYD+ NR SFLNTS+WIE+VRTERG DV+I+LVGNK
Sbjct: 101 DTAGQD----LIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNK 156
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TD+ D+RQVSIEEG KAKE VMFIETSAKAG+NIK LFRK+A LPGME + +
Sbjct: 157 TDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSN 216
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
++D+ L T + E C C
Sbjct: 217 LIDIKL--TAAPAPKENTAEQCNC 238
>gi|290993933|ref|XP_002679587.1| rab small GTPase [Naegleria gruberi]
gi|284093204|gb|EFC46843.1| rab small GTPase [Naegleria gruberi]
Length = 230
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/223 (66%), Positives = 171/223 (76%), Gaps = 18/223 (8%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
++ P KYK+VFLGDQ+VGKTSIITRFMYD FDTTY TIGIDFLSKTMYLEDRTVRLQL
Sbjct: 8 AIIPANKYKIVFLGDQAVGKTSIITRFMYDSFDTTYHNTIGIDFLSKTMYLEDRTVRLQL 67
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA+IVYD+ ++QSF+NT++WIE+VRTERG DVI+VLVGN
Sbjct: 68 WDTAGQERFRSLIPSYIRDSSVAIIVYDITSKQSFMNTNKWIEDVRTERGDDVIVVLVGN 127
Query: 123 KTDLV---DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KTDL DKRQVSIEEG+ KAKE+G+MF+ETSAKAG+NIK LF K+A ALP S+T
Sbjct: 128 KTDLASDSDKRQVSIEEGESKAKEYGIMFLETSAKAGYNIKTLFTKVANALPTAVDASAT 187
Query: 180 KQ----------EDMVDVNLKPT-----VNSSQTEQQGGGCAC 207
D+ V L+ T S +EQ C C
Sbjct: 188 SNPTPSTPTTSGNDVFLVPLRQTKLPESTQESTSEQPASYCQC 230
>gi|325094335|gb|EGC47645.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 209
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 166/203 (81%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGM+ + M
Sbjct: 132 DLNDKREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRIAQALPGMDDDAGRGANQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ PT S GCAC
Sbjct: 192 IDVNINPTQPVSND-----GCAC 209
>gi|358060564|dbj|GAA93714.1| hypothetical protein E5Q_00360 [Mixia osmundae IAM 14324]
Length = 252
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 165/205 (80%), Gaps = 10/205 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLGDQ+ GKTS+IT+FMY FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 54 LKKFKLVFLGDQNAGKTSLITQFMYGSFDATYQATIGIDFLSKTMYLEDRTVRLQLWDTA 113
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYD+ NR SF +T++WI++VR ERG DVIIVLVGNKTDL
Sbjct: 114 GQERFRSLIPSYIRDSSVAVVVYDITNRSSFASTNKWIDDVRAERGSDVIIVLVGNKTDL 173
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM----ETLSSTKQE 182
DKRQV+ EE + +AK+ GVMFIETSAKAG N+K LFRKIA ALPGM E + T Q
Sbjct: 174 NDKRQVTTEEAEKRAKDLGVMFIETSAKAGHNVKTLFRKIAQALPGMDRDSEQAAGTNQ- 232
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV KP S + GC+C
Sbjct: 233 -MIDVTSKP----SDAAPESSGCSC 252
>gi|169621732|ref|XP_001804276.1| hypothetical protein SNOG_14076 [Phaeosphaeria nodorum SN15]
gi|160704321|gb|EAT78701.2| hypothetical protein SNOG_14076 [Phaeosphaeria nodorum SN15]
Length = 205
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 166/203 (81%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N+++F NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRGERGNDVIIVLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ +MFIETSAK G N+K LF++IA ALPGME Q M
Sbjct: 128 DLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQSQM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P+ QQ C+C
Sbjct: 188 IDVNINPS-----QPQQESSCSC 205
>gi|347838050|emb|CCD52622.1| similar to ras-related protein Rab-6A [Botryotinia fuckeliana]
Length = 207
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 168/204 (82%), Gaps = 7/204 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++NR+SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNRKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQED 183
DL DKR+V+ EG+ +AK+ +MFIETSAK G N+K LFR+IA ALPGME ++
Sbjct: 130 DLNDKREVTTSEGEEEAKKNNLMFIETSAKLGHNVKTLFRRIAQALPGMEGADNAATPNQ 189
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
M+DVN+ PT + + GCAC
Sbjct: 190 MIDVNVNPTPANQE------GCAC 207
>gi|432898520|ref|XP_004076542.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Oryzias
latipes]
Length = 215
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 169/210 (80%), Gaps = 10/210 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT------- 57
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLTLSDGQ 68
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
+RLQLWDTAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII
Sbjct: 69 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 128
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL DKRQ++ EEG+ +AKE V+FIETSAK G+N+K LFR++AAALPGM+T
Sbjct: 129 MLVGNKTDLADKRQITTEEGEQRAKEMNVLFIETSAKTGYNVKQLFRRVAAALPGMDTSQ 188
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+EDM+D+ L+ +E G C+C
Sbjct: 189 DKSREDMIDIKLEKPPEQPASE---GSCSC 215
>gi|328849933|gb|EGF99105.1| hypothetical protein MELLADRAFT_40435 [Melampsora larici-populina
98AG31]
Length = 185
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/182 (78%), Positives = 160/182 (87%), Gaps = 3/182 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 1 LKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 60
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYDVANR SF+NTS+W+++VR ERG DVIIVLVGNKTDL
Sbjct: 61 GQERFRSLIPSYIRDSSVAVVVYDVANRTSFMNTSKWVDDVRAERGNDVIIVLVGNKTDL 120
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS---STKQED 183
DKRQVS +E + K+KE VMFIETSAKAG N+K LF+KIA ALPGM+T S ST Q +
Sbjct: 121 GDKRQVSSDEAEKKSKELNVMFIETSAKAGHNVKTLFKKIAQALPGMDTASDGRSTNQSN 180
Query: 184 MV 185
+
Sbjct: 181 SI 182
>gi|47225306|emb|CAG09806.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 137/195 (70%), Positives = 164/195 (84%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++ EEG+ +AKE VMFIETSAK G+N+K LFR++AAALPGM++ +ED
Sbjct: 126 DLADKRQITTEEGEQRAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDK 185
Query: 185 VDVNLKPTVNSSQTE 199
+ T+ + +E
Sbjct: 186 RSCRQRVTMTTENSE 200
>gi|432916107|ref|XP_004079295.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oryzias
latipes]
Length = 217
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 168/212 (79%), Gaps = 12/212 (5%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV------ 58
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTV
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVGHECFC 68
Query: 59 ---RLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDV 115
RLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T +WI++VRTERG DV
Sbjct: 69 LQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDV 128
Query: 116 IIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
II+LVGNKTDL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME+
Sbjct: 129 IIMLVGNKTDLEEKRQITIEEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAALPGMES 188
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
L E M+D+ L + E GGC+C
Sbjct: 189 LDDANPEGMIDIKLDKPAEPTVPE---GGCSC 217
>gi|294873005|ref|XP_002766487.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239867367|gb|EEQ99204.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 205
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 166/203 (81%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD+ YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 3 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDSNYQATIGIDFLSKTMYLEDRTVRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+ YD+ N+ SF+N +WI++VRTERG DVII+LVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVAVVGYDITNKASFMNCEKWIDDVRTERGNDVIIMLVGNKT 122
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS EEG+ KAKE GVMF E SAKAG+NIK LFRK+AAALP + +Q
Sbjct: 123 DLADKRQVSTEEGEQKAKEQGVMFTECSAKAGYNIKALFRKLAAALPQSNDQGAGQQGQS 182
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V+++ ++S+ ++ CAC
Sbjct: 183 QIVDIQLNASNSEPQEHAKKCAC 205
>gi|295667515|ref|XP_002794307.1| GTP-binding protein YPT52 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286413|gb|EEH41979.1| GTP-binding protein YPT52 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226291866|gb|EEH47294.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 209
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 166/203 (81%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D+R+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGM+ + M
Sbjct: 132 DLNDRREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGANQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ PT S GCAC
Sbjct: 192 IDVNINPTQPVSND-----GCAC 209
>gi|308471931|ref|XP_003098195.1| CRE-RAB-6.1 protein [Caenorhabditis remanei]
gi|308269346|gb|EFP13299.1| CRE-RAB-6.1 protein [Caenorhabditis remanei]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/201 (71%), Positives = 167/201 (83%), Gaps = 4/201 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTA
Sbjct: 9 LKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYD+ N SF T++W+++VR ERG DVIIVLVGNKTDL
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDL 128
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQVS E+G+ KA++ VMFIETSAKAG+N+K LFRKIA ALPG+ + +Q ++V
Sbjct: 129 ADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNIVI 188
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+N P +S +TE G C C
Sbjct: 189 MN--PPKDSEETE--GRQCPC 205
>gi|451856251|gb|EMD69542.1| hypothetical protein COCSADRAFT_78453 [Cochliobolus sativus ND90Pr]
gi|452003327|gb|EMD95784.1| hypothetical protein COCHEDRAFT_1087944 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 167/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N+++F NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRGERGNDVIIVLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +AK+ +MFIETSAK G N+K LF++IA ALPGME Q M
Sbjct: 128 DLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQSQM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ P SQ Q+ C+C
Sbjct: 188 IDVNINP----SQPAQE-NSCSC 205
>gi|209737742|gb|ACI69740.1| Ras-related protein Rab-6B [Salmo salar]
Length = 212
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 166/207 (80%), Gaps = 7/207 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVR----L 60
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVR L
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRNSVRL 68
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T +WI++VRTERG DVII+LV
Sbjct: 69 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNMNSFQQTCKWIDDVRTERGSDVIIMLV 128
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL +KRQ++IE G+ +AKE VMFIETSAK G N+K LFR++AA LPGME+L
Sbjct: 129 GNKTDLEEKRQITIEAGEQRAKELNVMFIETSAKTGTNVKQLFRRVAATLPGMESLDDVN 188
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
E M+D+ L + E GGC+C
Sbjct: 189 PEGMIDIKLDKPAEPTVPE---GGCSC 212
>gi|440639268|gb|ELR09187.1| Ras-like protein Rab-6B [Geomyces destructans 20631-21]
Length = 209
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 170/205 (82%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL D+R+V+ ++G+ +AK+ +MFIETSAK G NIK LFR+IA ALPGME S
Sbjct: 131 DLNDRREVTTQQGEEEAKKNNLMFIETSAKVGHNIKNLFRRIAQALPGMEGADSAASAGN 190
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DVN+ NS+Q+++ GCAC
Sbjct: 191 QMIDVNIN---NSTQSQE---GCAC 209
>gi|339717366|pdb|2Y8E|A Chain A, Crystal Structure Of D. Melanogaster Rab6 Gtpase Bound To
Gmppnp
gi|339717367|pdb|2Y8E|B Chain B, Crystal Structure Of D. Melanogaster Rab6 Gtpase Bound To
Gmppnp
Length = 179
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/170 (81%), Positives = 155/170 (91%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM+
Sbjct: 130 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMD 179
>gi|260796185|ref|XP_002593085.1| hypothetical protein BRAFLDRAFT_210049 [Branchiostoma floridae]
gi|229278309|gb|EEN49096.1| hypothetical protein BRAFLDRAFT_210049 [Branchiostoma floridae]
Length = 196
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/196 (72%), Positives = 163/196 (83%), Gaps = 3/196 (1%)
Query: 13 VFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 72
VF VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR
Sbjct: 3 VFSVSSIVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 62
Query: 73 SLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQV 132
SLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQV
Sbjct: 63 SLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV 122
Query: 133 SIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEDMVDVNLKP 191
S+E+G+ KAKE VMFIETSAK G+N+K LFR++AAALPGME+ K +EDM++V LK
Sbjct: 123 SLEDGERKAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMESSQDQKNKEDMIEVKLKD 182
Query: 192 TVNSSQTEQQGGGCAC 207
T Q+ Q GGCAC
Sbjct: 183 TPQEPQS--QEGGCAC 196
>gi|444513620|gb|ELV10424.1| Ras-related protein Rab-6B [Tupaia chinensis]
Length = 357
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 135/181 (74%), Positives = 158/181 (87%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K FR++A+ALPGME + +E
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQXFRRVASALPGMENVQEKSKEGS 188
Query: 185 V 185
+
Sbjct: 189 I 189
>gi|189205773|ref|XP_001939221.1| GTP-binding protein ryh1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330935415|ref|XP_003304956.1| hypothetical protein PTT_17690 [Pyrenophora teres f. teres 0-1]
gi|187975314|gb|EDU41940.1| GTP-binding protein ryh1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311318146|gb|EFQ86893.1| hypothetical protein PTT_17690 [Pyrenophora teres f. teres 0-1]
Length = 204
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 166/206 (80%), Gaps = 5/206 (2%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 4 AYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYD+ N+++F NT +W+++VR ERG DVIIVLVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRGERGNDVIIVLVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL DKR+V+ +G+ +AK+ +MFIETSAK G N+K LF++IA ALPGME Q
Sbjct: 124 NKTDLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGMEGEGQQGQ 183
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DVN+ P+ Q C+C
Sbjct: 184 SQMIDVNINPS-----QPPQDSSCSC 204
>gi|402082888|gb|EJT77906.1| Ras-like protein Rab-6A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 209
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 167/203 (82%), Gaps = 4/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WIE+VR ERG DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIEDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ ++G+ +AK+F +MF+ETSAK G N+K LF++IA ALPGME + +Q
Sbjct: 131 DLNDKRQVTTQQGEDEAKKFNLMFVETSAKVGHNVKNLFKRIALALPGMEGTEAAQQATS 190
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+++K S+ T+ CAC
Sbjct: 191 QIIDIK----SNNTQAANEPCAC 209
>gi|344296650|ref|XP_003420019.1| PREDICTED: ras-related protein Rab-6B-like [Loxodonta africana]
Length = 192
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 158/178 (88%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME + +E
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKE 186
>gi|73535740|pdb|1YZQ|A Chain A, Gppnhp-Bound Rab6 Gtpase
Length = 170
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/169 (81%), Positives = 154/169 (91%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SPL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 2 SPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 62 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 121
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM
Sbjct: 122 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGM 170
>gi|389644110|ref|XP_003719687.1| Ras-like protein Rab-6A [Magnaporthe oryzae 70-15]
gi|351639456|gb|EHA47320.1| Ras-like protein Rab-6A [Magnaporthe oryzae 70-15]
Length = 209
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 171/205 (83%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDGMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK+ +MFIETSAK G N++PLF++IA +LPGME + +Q
Sbjct: 131 DLNDKREVTTQQGEEEAKKNNLMFIETSAKVGHNVQPLFKRIARSLPGMEGTEAAQQAAS 190
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV N++Q +Q+ GCAC
Sbjct: 191 QMIDVK----TNNTQAQQE--GCAC 209
>gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254827|gb|EAL17571.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 213
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 166/206 (80%), Gaps = 6/206 (2%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
++ +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 14 SASTPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQ 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAVIVYD+ NR SF NTS+W+++VR ERG DVIIVLVG
Sbjct: 74 LWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLVG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL DKRQV+ E+ D +AKE GVM IETSAKAG N+K LF+KIA ALPG S K
Sbjct: 134 NKTDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGG---SEAKD 190
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+++ +S Q Q GC+C
Sbjct: 191 NGTTKIDVS---SSPQEVPQASGCSC 213
>gi|399163145|gb|AFP33148.1| rab-6.1, partial [Caenorhabditis elegans]
Length = 204
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 166/201 (82%), Gaps = 4/201 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTA
Sbjct: 8 LKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYD+ N SF T++W+++VR ERG DVIIVLVGNKTDL
Sbjct: 68 GQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDL 127
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQVS E+G+ KA++ VMFIETSAKAG+N+K LFRKIA ALPG+ + +Q ++V
Sbjct: 128 ADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNIVI 187
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+N P ++ E QG C C
Sbjct: 188 MN--PPKDAE--ESQGRQCPC 204
>gi|395517929|ref|XP_003763122.1| PREDICTED: ras-related protein Rab-6A-like [Sarcophilus harrisii]
Length = 214
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 161/196 (82%), Gaps = 11/196 (5%)
Query: 16 GDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
G VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI
Sbjct: 26 GKIKVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 85
Query: 76 PSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIE 135
PSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIE
Sbjct: 86 PSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIE 145
Query: 136 EGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL----KP 191
EG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L +P
Sbjct: 146 EGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLEKPQEP 205
Query: 192 TVNSSQTEQQGGGCAC 207
VN GGC+C
Sbjct: 206 PVNE-------GGCSC 214
>gi|302692114|ref|XP_003035736.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
gi|300109432|gb|EFJ00834.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
Length = 210
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 168/207 (81%), Gaps = 8/207 (3%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S SP + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 10 SSSPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 69
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NRQSFL+TS+WI++VR+ERG DVIIVLVGN
Sbjct: 70 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGN 129
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE KA++ +MF+ETSAKAG N+K LF+KIA +LPGM+ +E
Sbjct: 130 KADLSDKRQVTLEEATAKAQQLNIMFMETSAKAGHNVKSLFKKIAMSLPGMD------KE 183
Query: 183 DMVDVNLKPTVNSSQTEQ--QGGGCAC 207
D N K V+++QT + + C C
Sbjct: 184 GQSDANTKIDVSTAQTGEVPEASQCQC 210
>gi|17553774|ref|NP_498993.1| Protein RAB-6.1 [Caenorhabditis elegans]
gi|464527|sp|P34213.1|RAB6A_CAEEL RecName: Full=Ras-related protein Rab-6.1
gi|3877850|emb|CAA77590.1| Protein RAB-6.1 [Caenorhabditis elegans]
Length = 205
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 166/201 (82%), Gaps = 4/201 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTA
Sbjct: 9 LKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYD+ N SF T++W+++VR ERG DVIIVLVGNKTDL
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDL 128
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQVS E+G+ KA++ VMFIETSAKAG+N+K LFRKIA ALPG+ + +Q ++V
Sbjct: 129 ADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNIVI 188
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+N P ++ E QG C C
Sbjct: 189 MN--PPKDAE--ESQGRQCPC 205
>gi|268574940|ref|XP_002642449.1| C. briggsae CBR-RAB-6.1 protein [Caenorhabditis briggsae]
Length = 205
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 166/201 (82%), Gaps = 4/201 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTA
Sbjct: 9 LKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYD+ N SF T++W+++VR ERG DVIIVLVGNKTDL
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDL 128
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQVS E+G+ KA++ VMFIETSAKAG+N+K LFRKIA ALPG+ + +Q ++V
Sbjct: 129 ADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNIVI 188
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+N P +S + QG C C
Sbjct: 189 MN--PPKDSE--DNQGRQCPC 205
>gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergillus niger]
Length = 210
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 169/204 (82%), Gaps = 6/204 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST-KQED 183
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGME ++ +
Sbjct: 132 DLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEANRGDNQT 191
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
++DVN+ P ++ GCAC
Sbjct: 192 VIDVNITPKETTTND-----GCAC 210
>gi|410971408|ref|XP_003992161.1| PREDICTED: uncharacterized protein LOC101087341 [Felis catus]
Length = 832
Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats.
Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 3/206 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+V P +L Q VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 630 AAVLPSFMGRLREQDGQGVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 689
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVG
Sbjct: 690 LWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVG 749
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME + +
Sbjct: 750 NKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSK 809
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
E M+D+ L +E GGC+C
Sbjct: 810 EGMIDIKLDKPQEPPASE---GGCSC 832
>gi|341900805|gb|EGT56740.1| CBN-RAB-6.1 protein [Caenorhabditis brenneri]
Length = 205
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 141/201 (70%), Positives = 167/201 (83%), Gaps = 4/201 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K+KLVFLG+QSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTA
Sbjct: 9 LKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYD+ N SF T++W+++VR ERG DVIIVLVGNKTDL
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDL 128
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQVS E+G+ KA++ VMFIETSAKAG+N+K LFRKIA ALPG+ + +Q ++V
Sbjct: 129 ADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEEAPEQPNIVI 188
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+N P ++ ++E G C C
Sbjct: 189 MN--PPKDAEESE--GRQCPC 205
>gi|327304701|ref|XP_003237042.1| GTP-binding protein ryh1 [Trichophyton rubrum CBS 118892]
gi|326460040|gb|EGD85493.1| GTP-binding protein ryh1 [Trichophyton rubrum CBS 118892]
gi|326472998|gb|EGD97007.1| Ras small monomeric GTPase [Trichophyton tonsurans CBS 112818]
Length = 209
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 166/203 (81%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAV+VYD++N +SF NT +W+++VR ERG DVII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ E+G+ +AK+ G+MFIETSAK G N+K LF+KIA ALPGME + M
Sbjct: 132 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGETPNSDNQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DV++ PT S CAC
Sbjct: 192 IDVSINPTKPVS-----NDACAC 209
>gi|296217099|ref|XP_002754841.1| PREDICTED: ras-related protein Rab-6A [Callithrix jacchus]
Length = 198
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/201 (69%), Positives = 165/201 (82%), Gaps = 6/201 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L+K +F+ SVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTA
Sbjct: 4 LSKSVFLFI---SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 60
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL
Sbjct: 61 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 120
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D
Sbjct: 121 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMID 180
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+ L+ +E GGC+C
Sbjct: 181 IKLEKPQEQPVSE---GGCSC 198
>gi|342873488|gb|EGU75655.1| hypothetical protein FOXB_13843 [Fusarium oxysporum Fo5176]
Length = 208
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 169/205 (82%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 130 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGSDAAAQASN 189
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV T NS Q+++ GCAC
Sbjct: 190 QMIDV---KTNNSQQSQE---GCAC 208
>gi|315045802|ref|XP_003172276.1| GTP-binding protein ryh1 [Arthroderma gypseum CBS 118893]
gi|311342662|gb|EFR01865.1| GTP-binding protein ryh1 [Arthroderma gypseum CBS 118893]
Length = 209
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 166/203 (81%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAV+VYD++N +SF NT +W+++VR ERG DVII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ E+G+ +AK+ G+MFIETSAK G N+K LF+KIA ALPGME + M
Sbjct: 132 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGETPNTDNQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DV++ PT S CAC
Sbjct: 192 IDVSINPTKPVS-----NDACAC 209
>gi|410045696|ref|XP_003313253.2| PREDICTED: ras-related protein Rab-6A [Pan troglodytes]
Length = 315
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/190 (72%), Positives = 160/190 (84%), Gaps = 3/190 (1%)
Query: 18 QSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 77
+SVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPS
Sbjct: 129 RSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPS 188
Query: 78 YIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEG 137
YIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG
Sbjct: 189 YIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEG 248
Query: 138 DGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQ 197
+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+
Sbjct: 249 ERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPV 308
Query: 198 TEQQGGGCAC 207
+E GGC+C
Sbjct: 309 SE---GGCSC 315
>gi|296806631|ref|XP_002844115.1| GTP-binding protein ryh1 [Arthroderma otae CBS 113480]
gi|238845417|gb|EEQ35079.1| GTP-binding protein ryh1 [Arthroderma otae CBS 113480]
Length = 209
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 167/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAV+VYD++N +SF NT +W+++VR ERG DVII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ E+G+ +AK+ G+MFIETSAK G N+K LF+KIA ALPGME ++ M
Sbjct: 132 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGEATNSDNQM 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DV++ PT S C+C
Sbjct: 192 IDVSINPTKPVS-----NDACSC 209
>gi|395757271|ref|XP_003780268.1| PREDICTED: ras-related protein Rab-6C-like [Pongo abelii]
Length = 254
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+ITRFMYD FD TYQATIGIDFLSKTMYLED T+RL LWD
Sbjct: 9 NPLTKFKLVFLGEQSVAKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDGTIRLPLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIPSYIRDS+ AV+VY + N SF T++WI++VRTERG DVII LVGNKT
Sbjct: 69 TAGQERLRSLIPSYIRDSAAAVVVYGITNVNSFQQTTKWIDDVRTERGSDVIITLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAK+ VMFIETSAKAG+N+K LFR++AA LPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKQLNVMFIETSAKAGYNVKQLFRRVAAVLPGMESTQDGSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ +E+ GC+C
Sbjct: 189 SDIKLEKPQEQPVSER---GCSC 208
>gi|310795170|gb|EFQ30631.1| Ras family protein [Glomerella graminicola M1.001]
Length = 209
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 168/205 (81%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 131 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTDAAAQASS 190
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV P +Q+ Q+ GCAC
Sbjct: 191 QMIDVKTTP----AQSSQE--GCAC 209
>gi|380485929|emb|CCF39041.1| Ras-like protein Rab-6A [Colletotrichum higginsianum]
Length = 209
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 168/205 (81%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 131 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGSDAATQASS 190
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV P +Q+ Q+ GCAC
Sbjct: 191 QMIDVKTAP----AQSSQE--GCAC 209
>gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521]
Length = 219
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/168 (80%), Positives = 152/168 (90%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 1 MRKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 60
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVAV+VYD+ NR SF NTS+W+++VR ERG DVIIVLVGNKTDL
Sbjct: 61 GQERFRSLIPSYIRDSSVAVVVYDITNRASFQNTSKWVDDVRAERGNDVIIVLVGNKTDL 120
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DKRQV+ EE + KA+EF VMFIETSAKAG N+K LF+KIA ALPGM+
Sbjct: 121 SDKRQVTTEEAEKKAQEFNVMFIETSAKAGHNVKVLFKKIAQALPGMD 168
>gi|268576735|ref|XP_002643347.1| C. briggsae CBR-RAB-6.2 protein [Caenorhabditis briggsae]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 165/203 (81%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ +EG+ KAKE VMFIETSAKAG+N+K LFR+IA ALPG+ +Q ++
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVEQPNV 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V ++ + Q G C C
Sbjct: 186 VTMD---PIRQRQIVTDEGSCWC 205
>gi|223997454|ref|XP_002288400.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220975508|gb|EED93836.1| rab-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 202
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/185 (76%), Positives = 160/185 (86%), Gaps = 5/185 (2%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+++PLAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 22 GTLAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQ 81
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV NR SFLNTS+W+E+VR ERG DV+I LVG
Sbjct: 82 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRASFLNTSKWVEDVRAERGNDVVICLVG 141
Query: 122 NKTDL-VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
NKTDL DKRQVS EEG+ KA + G++F+E SAKAG+N+K LFRK+A +LPG + +K
Sbjct: 142 NKTDLGNDKRQVSTEEGEEKASKDGLLFMECSAKAGYNVKSLFRKLATSLPGKQ----SK 197
Query: 181 QEDMV 185
QE V
Sbjct: 198 QEHTV 202
>gi|219122405|ref|XP_002181536.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406812|gb|EEC46750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 236
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/171 (80%), Positives = 155/171 (90%), Gaps = 1/171 (0%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S++PLAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 27 SLAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQL 86
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAV+VYDV+NR SFLNT++W+E+VR ERG DV+I LVGN
Sbjct: 87 WDTAGQERFRSLIPSYIRDSSVAVVVYDVSNRSSFLNTAKWVEDVRAERGNDVVICLVGN 146
Query: 123 KTDL-VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG 172
KTDL DKRQVS EEG+ +A + G++F+E SAKAG+N+K LFRK+A ALPG
Sbjct: 147 KTDLGNDKRQVSTEEGEERATKDGLLFMECSAKAGYNVKSLFRKLATALPG 197
>gi|354499457|ref|XP_003511825.1| PREDICTED: ras-related protein Rab-6A-like [Cricetulus griseus]
Length = 188
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/189 (71%), Positives = 159/189 (84%), Gaps = 3/189 (1%)
Query: 19 SVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
+VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSY
Sbjct: 3 TVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 62
Query: 79 IRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGD 138
IRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+
Sbjct: 63 IRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGE 122
Query: 139 GKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQT 198
KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+ +
Sbjct: 123 RKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVS 182
Query: 199 EQQGGGCAC 207
E GGC+C
Sbjct: 183 E---GGCSC 188
>gi|348555281|ref|XP_003463452.1| PREDICTED: ras-related protein Rab-6A-like [Cavia porcellus]
Length = 214
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/190 (72%), Positives = 159/190 (83%), Gaps = 3/190 (1%)
Query: 18 QSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 77
+ VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPS
Sbjct: 28 RPVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPS 87
Query: 78 YIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEG 137
YIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG
Sbjct: 88 YIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEG 147
Query: 138 DGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQ 197
+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+
Sbjct: 148 ERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPV 207
Query: 198 TEQQGGGCAC 207
TE GGC+C
Sbjct: 208 TE---GGCSC 214
>gi|326671399|ref|XP_003199429.1| PREDICTED: ras-related protein Rab-6A-like [Danio rerio]
Length = 192
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/191 (71%), Positives = 160/191 (83%), Gaps = 3/191 (1%)
Query: 17 DQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 76
D +VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIP
Sbjct: 5 DFAVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIP 64
Query: 77 SYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEE 136
SYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEE
Sbjct: 65 SYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEE 124
Query: 137 GDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSS 196
G+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+
Sbjct: 125 GERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLEKPPEQP 184
Query: 197 QTEQQGGGCAC 207
+E GGC+C
Sbjct: 185 VSE---GGCSC 192
>gi|156349251|ref|XP_001621980.1| hypothetical protein NEMVEDRAFT_v1g176370 [Nematostella vectensis]
gi|156208357|gb|EDO29880.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 164/206 (79%), Gaps = 6/206 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNYNSFQQTSKWIDDVRTERGNDVIIMLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG---METLSSTKQ 181
DL DKRQV+ EEG+ KAKE VMFIETSAKAG+N+K ++R +A LP M T +
Sbjct: 127 DLSDKRQVTAEEGERKAKELNVMFIETSAKAGYNVKQMYRNLALELPAGKDMMTEWGEYE 186
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+D++ V L+ T Q G C C
Sbjct: 187 DDLIKVTLQHT---PQQLDNAGSCGC 209
>gi|397611796|gb|EJK61478.1| hypothetical protein THAOC_18027, partial [Thalassiosira oceanica]
Length = 307
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/213 (68%), Positives = 169/213 (79%), Gaps = 10/213 (4%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
ASV+PLAKYKLVFLGDQSVGKTSIITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 96 ASVAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDRHYQATIGIDFLSKTMYLEDRTVRLQ 155
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYDV NR SFLNTS+W+E+VR ERG DV+I LVG
Sbjct: 156 LWDTAGQERFRSLIPSYIRDSSVAVVVYDVTNRASFLNTSKWVEDVRAERGNDVVICLVG 215
Query: 122 NKTDL-VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET----- 175
NKTDL DKRQVS EEG+ KA + ++F+E SAKAG+N+K LFRK+A +LPG +
Sbjct: 216 NKTDLGNDKRQVSTEEGEEKATKDNLLFMECSAKAGYNVKSLFRKLATSLPGTDAQNGAA 275
Query: 176 ---LSSTKQEDMVDVNLKPTVNSSQTEQQGGGC 205
+ +++D+ L ++ E +G GC
Sbjct: 276 GANTAGAGGSNLIDIKLS-QAPANLDEAKGCGC 307
>gi|398391937|ref|XP_003849428.1| hypothetical protein MYCGRDRAFT_101238 [Zymoseptoria tritici
IPO323]
gi|339469305|gb|EGP84404.1| hypothetical protein MYCGRDRAFT_101238 [Zymoseptoria tritici
IPO323]
Length = 207
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 167/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYDV +++SF T +W+++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDVTSQKSFAQTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KR+V+ ++G+ +AK G MF+ETSAK G N+K LF+KIA ALPGME +
Sbjct: 130 DLNEKREVTAQQGEEEAKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQAAANT 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN VN ++ E + GGC C
Sbjct: 190 IDVN----VNQTKPESE-GGCNC 207
>gi|409082156|gb|EKM82514.1| hypothetical protein AGABI1DRAFT_111121 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199982|gb|EKV49906.1| GTP binding protein [Agaricus bisporus var. bisporus H97]
Length = 214
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/207 (66%), Positives = 165/207 (79%), Gaps = 8/207 (3%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S +P + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 14 SSAPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 73
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NRQSF++T++WIE+VR+ERG DVIIVLVGN
Sbjct: 74 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFMSTTKWIEDVRSERGNDVIIVLVGN 133
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE KA + +MF+ETSAKAG N+K LF+KIA +LPGME +E
Sbjct: 134 KADLSDKRQVTLEEATAKATQLNIMFMETSAKAGHNVKGLFKKIAMSLPGME------KE 187
Query: 183 DMVDVNLKPTVNSSQTEQ--QGGGCAC 207
+ D N K V +S + + C C
Sbjct: 188 NQSDTNTKIDVTTSSAGEVPEASSCNC 214
>gi|393216771|gb|EJD02261.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 164/207 (79%), Gaps = 6/207 (2%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S SPL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 13 SSSPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 72
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NRQSFL+T +WI+EVR+ERG DVIIVLVGN
Sbjct: 73 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTRKWIDEVRSERGNDVIIVLVGN 132
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST--K 180
K DL DKR+V++E+ A E +MF+ETSAKAG N+K LFRKIA ALPGME S+
Sbjct: 133 KADLSDKREVTLEQAQELADELKIMFMETSAKAGHNVKSLFRKIALALPGMEKESAATDA 192
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + VDV KP N + C C
Sbjct: 193 ENNKVDVT-KPNENEI---PEASNCQC 215
>gi|308489025|ref|XP_003106706.1| CRE-RAB-6.2 protein [Caenorhabditis remanei]
gi|308253360|gb|EFO97312.1| CRE-RAB-6.2 protein [Caenorhabditis remanei]
Length = 205
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 165/203 (81%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ +EG+ KAKE VMFIETSAKAG+N+K LFR+IA ALPG+ + ++
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVEPPNV 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V ++ + Q + G C C
Sbjct: 186 VTMD---PIRQRQIVTEDGSCWC 205
>gi|338727025|ref|XP_001496149.3| PREDICTED: ras-related protein Rab-6A-like [Equus caballus]
Length = 187
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/188 (72%), Positives = 158/188 (84%), Gaps = 3/188 (1%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 3 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 62
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+
Sbjct: 63 RDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 122
Query: 140 KAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTE 199
KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+ +E
Sbjct: 123 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSE 182
Query: 200 QQGGGCAC 207
GGC+C
Sbjct: 183 ---GGCSC 187
>gi|225714626|gb|ACO13159.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
gi|290561885|gb|ADD38340.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
Length = 213
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 169/209 (80%), Gaps = 10/209 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED- 183
DL +KRQV E+G+ KAKE VMFIETSAKAG+N+K LFR++AAALPGM++ S+ + +
Sbjct: 129 DLSEKRQVPTEDGERKAKELNVMFIETSAKAGYNVKLLFRRVAAALPGMDSSSADQGANT 188
Query: 184 -----MVDVNLKPTVNSSQTEQQGGGCAC 207
V++ KP QT + GC C
Sbjct: 189 TGGLKTVELIEKPI--PEQTME--SGCTC 213
>gi|20071543|gb|AAH26915.1| Rab6 protein, partial [Mus musculus]
Length = 184
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/187 (73%), Positives = 157/187 (83%), Gaps = 3/187 (1%)
Query: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR
Sbjct: 1 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 60
Query: 81 DSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGK 140
DS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+ K
Sbjct: 61 DSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERK 120
Query: 141 AKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQ 200
AKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+ E
Sbjct: 121 AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVNE- 179
Query: 201 QGGGCAC 207
GGC+C
Sbjct: 180 --GGCSC 184
>gi|408398703|gb|EKJ77831.1| hypothetical protein FPSE_01924 [Fusarium pseudograminearum CS3096]
Length = 208
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 167/205 (81%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 130 DLNEKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGSDAAAQASN 189
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+D V ++ T+Q GCAC
Sbjct: 190 QMID------VKTNNTQQSQEGCAC 208
>gi|299753222|ref|XP_001833137.2| ryh1 [Coprinopsis cinerea okayama7#130]
gi|298410200|gb|EAU88826.2| ryh1 [Coprinopsis cinerea okayama7#130]
Length = 214
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 163/205 (79%), Gaps = 4/205 (1%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S +P + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 14 SSAPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 73
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NRQSFL+T++WI++VR+ERG DVIIVLVGN
Sbjct: 74 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGN 133
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE KA + +MF+ETSAKAG N+K LF+KIA +LPGME ++ +
Sbjct: 134 KADLSDKRQVTVEEATTKATQLNIMFMETSAKAGHNVKSLFKKIAMSLPGMEKDATAEAN 193
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
+DV+ + Q C C
Sbjct: 194 TKIDVSTPTAAEVPEASQ----CNC 214
>gi|406868593|gb|EKD21630.1| Ras family protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 208
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 168/205 (81%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL--SSTKQE 182
DL DKR+V+ ++G+ +AK+ +MFIETSAK G N+K LF++IA ALPGM+ S+
Sbjct: 130 DLNDKREVTTQQGEEEAKKNNLMFIETSAKVGHNVKNLFKRIAQALPGMDGAEGSAATGN 189
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV++ PT + + GCAC
Sbjct: 190 QMIDVSINPTPANQE------GCAC 208
>gi|170087436|ref|XP_001874941.1| GTP binding protein [Laccaria bicolor S238N-H82]
gi|164650141|gb|EDR14382.1| GTP binding protein [Laccaria bicolor S238N-H82]
Length = 213
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 165/207 (79%), Gaps = 8/207 (3%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S SP + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 13 SSSPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 72
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NRQSFL+T++WI++VR+ERG DVIIVLVGN
Sbjct: 73 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGN 132
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE K+ + +MF+ETSAKAG N+K LF+KIA +LPGME +E
Sbjct: 133 KADLSDKRQVTLEEATAKSTQLNIMFMETSAKAGHNVKSLFKKIAMSLPGME------KE 186
Query: 183 DMVDVNLKPTVNSSQTEQ--QGGGCAC 207
+ D N K V + + + C+C
Sbjct: 187 NQADPNTKIDVTTPTAGEIPEASQCSC 213
>gi|17570073|ref|NP_510790.1| Protein RAB-6.2 [Caenorhabditis elegans]
gi|74966331|sp|Q22782.1|RAB6B_CAEEL RecName: Full=Ras-related protein Rab-6.2
gi|351059242|emb|CCD74453.1| Protein RAB-6.2 [Caenorhabditis elegans]
Length = 205
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ +EG+ KAKE VMFIETSAKAG+N+K LFR+IA ALPG+ + ++
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVEPPNV 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V ++ + Q G C C
Sbjct: 186 VTMD---PIRQRQIVTDEGSCWC 205
>gi|341903589|gb|EGT59524.1| CBN-RAB-6.2 protein [Caenorhabditis brenneri]
Length = 205
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 6 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ +EG+ KAKE VMFIETSAKAG+N+K LFR+IA ALPG+ + ++
Sbjct: 126 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVETPNV 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V ++ + Q G C C
Sbjct: 186 VTMD---PIRQRQIVTDEGSCWC 205
>gi|399163147|gb|AFP33149.1| rab-6.2, partial [Caenorhabditis elegans]
Length = 204
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 5 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKT 124
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQV+ +EG+ KAKE VMFIETSAKAG+N+K LFR+IA ALPG+ + ++
Sbjct: 125 DLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVEPPNV 184
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
V ++ + Q G C C
Sbjct: 185 VTMD---PIRQRQIVTDEGSCWC 204
>gi|390597749|gb|EIN07148.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 214
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 162/205 (79%), Gaps = 3/205 (1%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S +P + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 13 SSAPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 72
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NR SFL+TS+WI++VR+ERG DVIIVLVGN
Sbjct: 73 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRASFLSTSKWIDDVRSERGNDVIIVLVGN 132
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE K++E VMF+ETSAKAG N+K LF+KIA +LPGME S +
Sbjct: 133 KADLSDKRQVTLEEATTKSQEMNVMFMETSAKAGHNVKSLFKKIAMSLPGME---SQADK 189
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
D + + T + + C C
Sbjct: 190 DAANTKIDVTTTKAADVPEASQCQC 214
>gi|453081493|gb|EMF09542.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 207
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 168/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ +++SF T +W+++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITSKKSFEQTRKWVDDVRGERGSDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KR+V+ ++G+ ++K G MF+ETSAK G N+K LF+KIA ALPGME +
Sbjct: 130 DLGEKREVTAQQGEEESKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQGPANT 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN VN+++ E + GGC C
Sbjct: 190 IDVN----VNAAKPESE-GGCNC 207
>gi|452978536|gb|EME78299.1| hypothetical protein MYCFIDRAFT_190637 [Pseudocercospora fijiensis
CIRAD86]
Length = 207
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 167/203 (82%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ +++SF T +W+++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITSQKSFQQTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KR+V+ ++G+ ++K G MF+ETSAK G N+K LF+KIA ALPGME +
Sbjct: 130 DLSEKREVTAQQGEEESKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQGPANT 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN VN+ + E + GGC C
Sbjct: 190 IDVN----VNAQKPESE-GGCNC 207
>gi|358396900|gb|EHK46275.1| secretion-related small GTPase RAB6/RYH1/SRG3 [Trichoderma
atroviride IMI 206040]
Length = 207
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 167/205 (81%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK G+ F+ETSAK G N++ LF++IA ALPGME S Q
Sbjct: 129 DLNDKREVTTQQGEEEAKRQGLRFVETSAKLGHNVQNLFKRIAQALPGMEGSDSATQATN 188
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV N+ Q +Q+ GC+C
Sbjct: 189 QMIDVR----TNTQQPQQE--GCSC 207
>gi|393245652|gb|EJD53162.1| GTP binding protein [Auricularia delicata TFB-10046 SS5]
Length = 214
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 163/206 (79%), Gaps = 5/206 (2%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S SPL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 13 SSSPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 72
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NR SFL+T++WI++VR+ERG DVIIVLVGN
Sbjct: 73 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGSDVIIVLVGN 132
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTKQ 181
K DL DKRQV+ EE KA E +MF+ETSAKAG N+K LF+KIA +LPG+E S+ Q
Sbjct: 133 KADLSDKRQVTHEEATNKATEMNIMFMETSAKAGHNVKSLFKKIAMSLPGVEKEASADAQ 192
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+DV P VN + C C
Sbjct: 193 NAKIDVKNTP-VNEV---PEASTCNC 214
>gi|392595561|gb|EIW84884.1| GTP binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 214
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 164/208 (78%), Gaps = 9/208 (4%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S +P + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 13 SSTPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 72
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NRQSFL+T++WIE+VR+ERG DVIIVLVGN
Sbjct: 73 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIEDVRSERGNDVIIVLVGN 132
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE K+ E +MF+ETSAKAG N+K LF+KIA +LPGME +E
Sbjct: 133 KADLSDKRQVTLEEATTKSTEMNIMFMETSAKAGHNVKSLFKKIALSLPGME------KE 186
Query: 183 DMVDV-NLKPTVNSSQTE--QQGGGCAC 207
D N K V S+Q + C C
Sbjct: 187 GQADAQNTKIDVTSTQPAPVPEASQCNC 214
>gi|336367247|gb|EGN95592.1| hypothetical protein SERLA73DRAFT_186692 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379967|gb|EGO21121.1| hypothetical protein SERLADRAFT_475872 [Serpula lacrymans var.
lacrymans S7.9]
Length = 214
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/208 (66%), Positives = 166/208 (79%), Gaps = 9/208 (4%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S +P + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 13 SSTPPKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQL 72
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NRQSFL+TS+WI++VR+ERG DVIIVLVGN
Sbjct: 73 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGN 132
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE K+ + +MF+ETSAKAG N+K LF+KIA +LPGME +E
Sbjct: 133 KADLSDKRQVTLEEATAKSTQLNIMFMETSAKAGHNVKGLFKKIAMSLPGME------KE 186
Query: 183 DMVDV-NLKPTVNSSQTEQ--QGGGCAC 207
DV N K V +++ Q C+C
Sbjct: 187 GQSDVQNAKIDVTTAEASQVPDASQCSC 214
>gi|326924238|ref|XP_003208337.1| PREDICTED: ras-related protein Rab-6A-like [Meleagris gallopavo]
Length = 200
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 158/188 (84%), Gaps = 3/188 (1%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 16 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 75
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+VAVIV+D+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+
Sbjct: 76 RDSAVAVIVFDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 135
Query: 140 KAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTE 199
KA+E +M+IETSAKAG+N+K LFR++AAALPGM++ +EDM+D+ L+ TE
Sbjct: 136 KARELNMMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEKSKEDMIDIKLEKPPEQPVTE 195
Query: 200 QQGGGCAC 207
GC+C
Sbjct: 196 ---SGCSC 200
>gi|410057389|ref|XP_003954210.1| PREDICTED: ras-related protein Rab-6C-like [Pan troglodytes]
Length = 254
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 162/203 (79%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+ITRFMYD FD TYQATIGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAK V FIET AKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVRFIETRAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ +E GGC+C
Sbjct: 189 SDIKLEKPQEQPVSE---GGCSC 208
>gi|367032973|ref|XP_003665769.1| hypothetical protein MYCTH_2309779 [Myceliophthora thermophila ATCC
42464]
gi|347013041|gb|AEO60524.1| hypothetical protein MYCTH_2309779 [Myceliophthora thermophila ATCC
42464]
Length = 210
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 164/205 (80%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 132 DLNDKREVTTQQGEEEAKRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTDAAAQASS 191
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV P + Q GCAC
Sbjct: 192 QMIDVK-TPAAPAPQE-----GCAC 210
>gi|452838904|gb|EME40844.1| hypothetical protein DOTSEDRAFT_178065 [Dothistroma septosporum
NZE10]
Length = 207
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 166/203 (81%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ +++SF T +W+++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDITSKKSFEQTRKWVDDVRGERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KR+V+ + G+ ++K G MF+ETSAK G N+K LF+KIA ALPGME +
Sbjct: 130 DLSEKREVTAQMGEEESKRLGCMFVETSAKVGHNVKGLFKKIAQALPGMEGEGQQGVANT 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN VN+ + E + GGC C
Sbjct: 190 IDVN----VNAPKPESE-GGCNC 207
>gi|367053789|ref|XP_003657273.1| hypothetical protein THITE_2152148 [Thielavia terrestris NRRL 8126]
gi|347004538|gb|AEO70937.1| hypothetical protein THITE_2152148 [Thielavia terrestris NRRL 8126]
Length = 210
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 163/205 (79%), Gaps = 8/205 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 132 DLNDKREVTTQQGEEEAKRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTDAAAQASS 191
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+D V + Q GCAC
Sbjct: 192 QMID------VKTPAAPQPQEGCAC 210
>gi|58261886|ref|XP_568353.1| hypothetical protein CNM00590 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57230526|gb|AAW46836.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 213
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 164/206 (79%), Gaps = 6/206 (2%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
++ +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 14 SASTPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQ 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTA ERFRSLIPSYIRDSSVAVIVYD+ NR SF NTS+W+++VR ERG DVIIVLVG
Sbjct: 74 LWDTALFERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLVG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL DKRQV+ E+ D +AKE GVM IETSAKAG N+K LF+KIA ALPG S K
Sbjct: 134 NKTDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGG---SEAKD 190
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+++ +S Q Q GC+C
Sbjct: 191 NGTTKIDVS---SSPQEVPQASGCSC 213
>gi|355560026|gb|EHH16754.1| hypothetical protein EGK_12093, partial [Macaca mulatta]
gi|355747048|gb|EHH51662.1| hypothetical protein EGM_11085, partial [Macaca fascicularis]
Length = 186
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/189 (70%), Positives = 157/189 (83%), Gaps = 3/189 (1%)
Query: 19 SVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
+VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 1 TVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 60
Query: 79 IRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGD 138
IRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IEEG+
Sbjct: 61 IRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGE 120
Query: 139 GKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQT 198
+AKE VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L +
Sbjct: 121 QRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPAS 180
Query: 199 EQQGGGCAC 207
E GGC+C
Sbjct: 181 E---GGCSC 186
>gi|392567066|gb|EIW60241.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 214
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 162/207 (78%), Gaps = 6/207 (2%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S PL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSK MYLEDRTVRLQL
Sbjct: 12 SSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDRTVRLQL 71
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQER+RSLIPSYIRD SVA++V+D+ NRQSFL+TS+WI++VR+ERG DVIIVLVGN
Sbjct: 72 WDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGN 131
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM--ETLSSTK 180
K DL DKRQV++EE + KA+E +MF+ETSAKAG N+K LF+KIA +L GM E ++
Sbjct: 132 KADLSDKRQVTLEEANAKAQELNIMFMETSAKAGHNVKSLFKKIAMSLVGMEKENEAADA 191
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
Q +DV PT Q C C
Sbjct: 192 QNTKIDVTSPPTNEVPDASQ----CQC 214
>gi|353236471|emb|CCA68465.1| probable YPT6-GTP-binding protein of the rab family [Piriformospora
indica DSM 11827]
Length = 219
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/170 (77%), Positives = 150/170 (88%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SPL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 15 SPLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA++VYD+ NR SFL+TS+WI++VR+ERG DVIIVLVGNK
Sbjct: 75 TAGQERFRSLIPSYIRDSSVAIVVYDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKA 134
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL DKRQV+ EE KA + +MF+ETSAKAG N+K LF+KIA ALPGM+
Sbjct: 135 DLSDKRQVTHEEASTKATQLNLMFMETSAKAGHNVKSLFKKIAMALPGMD 184
>gi|400599769|gb|EJP67460.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 208
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 167/203 (82%), Gaps = 4/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKT++ITRFMYD FD YQAT+GIDF SKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTALITRFMYDCFDNMYQATVGIDFFSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYDV+N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDVSNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 130 DLNDKREVTTQQGEDEAKKNNLMFVETSAKLGHNVKHLFKRIAQALPGMEGTDAAAQASS 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+++K N++Q Q+ GC+C
Sbjct: 190 QIIDVK--TNTAQQAQE--GCSC 208
>gi|403265828|ref|XP_003925114.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 195
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 156/188 (82%), Gaps = 3/188 (1%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 11 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 70
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IEEG+
Sbjct: 71 RDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQ 130
Query: 140 KAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTE 199
+AKE VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L +E
Sbjct: 131 RAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASE 190
Query: 200 QQGGGCAC 207
GGC+C
Sbjct: 191 ---GGCSC 195
>gi|297672011|ref|XP_002814109.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Pongo abelii]
gi|332818086|ref|XP_001147918.2| PREDICTED: ras-related protein Rab-6B [Pan troglodytes]
gi|397503905|ref|XP_003822555.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Pan paniscus]
gi|402861533|ref|XP_003895144.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Papio anubis]
gi|426342172|ref|XP_004036387.1| PREDICTED: ras-related protein Rab-6B isoform 2 [Gorilla gorilla
gorilla]
gi|221040792|dbj|BAH12073.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 156/188 (82%), Gaps = 3/188 (1%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 11 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 70
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IEEG+
Sbjct: 71 RDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQ 130
Query: 140 KAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTE 199
+AKE VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L +E
Sbjct: 131 RAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASE 190
Query: 200 QQGGGCAC 207
GGC+C
Sbjct: 191 ---GGCSC 195
>gi|171683621|ref|XP_001906753.1| hypothetical protein [Podospora anserina S mat+]
gi|170941770|emb|CAP67424.1| unnamed protein product [Podospora anserina S mat+]
Length = 213
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 163/203 (80%), Gaps = 1/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ +G+ +A++ +MF+ETSAKAG N+K LF+KIA ALPGME +
Sbjct: 132 DLNDKREVTTAQGEEEARKNNLMFVETSAKAGHNVKNLFKKIAQALPGMEGADGSAAASA 191
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+ V S+ T QQ GC C
Sbjct: 192 QASSQMIDVKSTTTPQQ-DGCGC 213
>gi|325303662|tpg|DAA34344.1| TPA_inf: Rab6 subfamily protein [Amblyomma variegatum]
Length = 174
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/166 (80%), Positives = 151/166 (90%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
DL DKRQV+ EEG+ KAKE VMFIETSAK+G+N+K LFR++AAAL
Sbjct: 129 DLSDKRQVTTEEGERKAKELNVMFIETSAKSGYNVKQLFRRVAAAL 174
>gi|432108419|gb|ELK33169.1| Ras-related protein Rab-6B [Myotis davidii]
Length = 207
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 165/212 (77%), Gaps = 10/212 (4%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M P+A K VF G+ +GKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MPPPQPVANDKAVFPGE--LGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRL 58
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LV
Sbjct: 59 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLV 118
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME +
Sbjct: 119 GNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKS 178
Query: 181 QED-----MVDVNLKPTVNSSQTEQQGGGCAC 207
+E ++D+ L +E GGC+C
Sbjct: 179 KEGTLPPAVIDIKLDKPQEPPASE---GGCSC 207
>gi|449295568|gb|EMC91589.1| hypothetical protein BAUCODRAFT_79545 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 165/206 (80%), Gaps = 5/206 (2%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A +PL K+KLVFLG+QSVGKTS+ITRFMYD FD+TYQATIGIDFLSKTMYL+DRTVRLQ
Sbjct: 6 AYTNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLDDRTVRLQ 65
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYD+ + +SF +W+++VR ERG DVIIVLVG
Sbjct: 66 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITSLKSFQQCRKWVDDVRGERGQDVIIVLVG 125
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL +KR+VS++ G+ ++K+ G +F+ETSAK G N+K LF+KIA ALPGME
Sbjct: 126 NKTDLGEKREVSVQMGEEESKKLGCLFVETSAKVGHNVKGLFKKIAQALPGMEGEGVQGA 185
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ +DVN+ P Q + GGC C
Sbjct: 186 ANTIDVNVNP-----QKPESEGGCNC 206
>gi|346326194|gb|EGX95790.1| RAS small monomeric GTPase Rab6 [Cordyceps militaris CM01]
Length = 208
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 167/203 (82%), Gaps = 4/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKT++ITRFMYD FD YQAT+GIDF SKTMYLEDRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTALITRFMYDCFDNMYQATVGIDFFSKTMYLEDRTVRLQLWD 69
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYDV+N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 70 TAGQERFRSLIPSYIRDSSVAVVVYDVSNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 129
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA +LPGME + Q
Sbjct: 130 DLNDKREVTTQQGEDEAKKNNLMFVETSAKLGHNVKNLFKRIAQSLPGMEGTDAAAQASS 189
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+++K N++Q Q+ GC+C
Sbjct: 190 QIIDVK--TNTTQQAQE--GCSC 208
>gi|110590290|pdb|2GIL|A Chain A, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590291|pdb|2GIL|B Chain B, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590292|pdb|2GIL|C Chain C, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
gi|110590293|pdb|2GIL|D Chain D, Structure Of The Extremely Slow Gtpase Rab6a In The Gtp
Bound Form At 1.8 Resolution
Length = 162
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/162 (82%), Positives = 149/162 (91%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL D
Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 120
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
KRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAAL
Sbjct: 121 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 162
>gi|332814413|ref|XP_003309297.1| PREDICTED: ras-related protein Rab-6C-like [Pan troglodytes]
Length = 254
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 161/203 (79%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+ITRFMYD FD TYQATIGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAK V FIET AKAG+N+K LFR++AAA PGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVRFIETRAKAGYNVKQLFRRVAAASPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ ++ GGC+C
Sbjct: 189 SDIKLEKPQEQPVSQ---GGCSC 208
>gi|148684518|gb|EDL16465.1| RAB6, member RAS oncogene family, isoform CRA_d [Mus musculus]
Length = 179
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 132/173 (76%), Positives = 152/173 (87%), Gaps = 1/173 (0%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
+GKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 1 LGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 60
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+
Sbjct: 61 RDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 120
Query: 140 KAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL-KP 191
KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L KP
Sbjct: 121 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKP 173
>gi|321264959|ref|XP_003197196.1| GTPase, Ras-like GTP binding protein; Ypt6p [Cryptococcus gattii
WM276]
gi|317463675|gb|ADV25409.1| GTPase, Ras-like GTP binding protein, putative; Ypt6p [Cryptococcus
gattii WM276]
Length = 211
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 162/206 (78%), Gaps = 8/206 (3%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
++ +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQ
Sbjct: 14 SASTPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQ 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDT ERFRSLIPSYIRDSSVAVIVYD+ NR SF NTS+W+++VR ERG DVIIVLVG
Sbjct: 74 LWDTG--ERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLVG 131
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NKTDL DKRQV+ E+ D +AKE GVM IETSAKAG N+K LF+KIA ALPG +
Sbjct: 132 NKTDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGGNEAKDSGA 191
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+DV+ P Q Q GC+C
Sbjct: 192 T-KIDVSASP-----QEVPQASGCSC 211
>gi|395333800|gb|EJF66177.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 214
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/207 (65%), Positives = 160/207 (77%), Gaps = 6/207 (2%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S PL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSK MYLEDRTVRLQL
Sbjct: 12 SSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDRTVRLQL 71
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQER+RSLIPSYIRD SVA++V+D+ NRQSFL+TS+WI++VR+ERG DVIIVLVGN
Sbjct: 72 WDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGN 131
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS--STK 180
K DL DKRQV++EE + KA + +MF+ETSAKAG N+K LF+KIA +L GME + S
Sbjct: 132 KADLSDKRQVTLEEANAKATQLNIMFMETSAKAGHNVKSLFKKIAMSLVGMEKENEQSEA 191
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
Q +DV P Q C C
Sbjct: 192 QNTKIDVTSPPQNEVPDASQ----CQC 214
>gi|389749162|gb|EIM90339.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 165/207 (79%), Gaps = 7/207 (3%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S + L + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKT+YL+DRTVRLQL
Sbjct: 13 SSTSLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTLYLDDRTVRLQL 72
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDS+VA++V+D+ NR SF++T++WI++VR+ERG DV++VLVGN
Sbjct: 73 WDTAGQERFRSLIPSYIRDSTVAIVVFDITNRASFMSTTKWIDDVRSERGNDVMVVLVGN 132
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL DKRQV++EE K+++ +MF+ETSAKAG N+K LF+KIA +LPGME K+
Sbjct: 133 KADLSDKRQVTLEEATAKSQQLNIMFMETSAKAGHNVKSLFKKIAMSLPGME-----KEN 187
Query: 183 DMVDVNLKPTVNSSQTEQ--QGGGCAC 207
+ N K V S QT + + C C
Sbjct: 188 QNAEPNAKIDVTSPQTAEIPEASQCQC 214
>gi|116875763|ref|NP_115520.2| ras-related protein Rab-6C [Homo sapiens]
gi|166214970|sp|Q9H0N0.2|RAB6C_HUMAN RecName: Full=Ras-related protein Rab-6C; AltName: Full=Rab6-like
protein WTH3
gi|62822497|gb|AAY15045.1| unknown [Homo sapiens]
gi|119615768|gb|EAW95362.1| RAB6C, member RAS oncogene family [Homo sapiens]
gi|119632105|gb|EAX11700.1| hCG2014445 [Homo sapiens]
Length = 254
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 161/203 (79%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+ITRF YD FD TYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+EEG+ KAK V FIET AKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ + +E GGC+C
Sbjct: 189 SDIKLEKPQEQTVSE---GGCSC 208
>gi|300120200|emb|CBK19754.2| unnamed protein product [Blastocystis hominis]
Length = 219
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 159/205 (77%), Gaps = 3/205 (1%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++PL KYKLVFLGD VGKTSIITRFMYD FD++YQATIGIDFLSKTMYL+DRTVRLQLW
Sbjct: 17 MTPLEKYKLVFLGDPGVGKTSIITRFMYDTFDSSYQATIGIDFLSKTMYLDDRTVRLQLW 76
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAVIVYD+ NR SF NT +W+ +VR ERG DV+IVLVGNK
Sbjct: 77 DTAGQERFRSLIPSYIRDSSVAVIVYDLTNRTSFENTRKWLSDVRVERGDDVVIVLVGNK 136
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDL D RQVS EG+ AKE V+FIETSAK FN+ LFRK+A LPG K+ +
Sbjct: 137 TDLSDSRQVSTNEGEALAKELNVLFIETSAKCNFNVTALFRKVATTLPGEG--KPKKEGE 194
Query: 184 MVDVNLKPTVNSSQT-EQQGGGCAC 207
+ +K V S T E + GC+C
Sbjct: 195 SENKFIKINVESKGTDEAKNAGCSC 219
>gi|401411219|ref|XP_003885057.1| RAB5C, member RAS oncogene family, related, partial [Neospora
caninum Liverpool]
gi|325119476|emb|CBZ55029.1| RAB5C, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 185
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 149/167 (89%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+V+ L KYKLVFLG+Q+VGKTSIITRFMYD FD YQATIGIDFLSKT+YLEDRTVRLQ
Sbjct: 4 ATVAGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTVRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSS AV+VYD+ NR SFLNT++WIE+VR ERG DVII LVG
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSAAVVVYDITNRASFLNTTKWIEDVRAERGNDVIISLVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAA 168
NKTDL D+RQVS EEG KA+E +MF+ETSAKAG+NIK LFRK+++
Sbjct: 124 NKTDLADRRQVSYEEGRQKAQEHDIMFVETSAKAGYNIKNLFRKLSS 170
>gi|396465538|ref|XP_003837377.1| similar to ras-related protein Rab-6A [Leptosphaeria maculans JN3]
gi|312213935|emb|CBX93937.1| similar to ras-related protein Rab-6A [Leptosphaeria maculans JN3]
Length = 210
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/170 (75%), Positives = 152/170 (89%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N+++F NT +W+++VR+ER DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNKKTFENTRKWVDDVRSERSNDVIIVLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL DKR+V+ +G+ +AK+ +MFIETSAK G N+K LF++IA ALPGME
Sbjct: 128 DLNDKREVTTAQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGME 177
>gi|430811133|emb|CCJ31387.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 203
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/194 (68%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+KLVFLGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ
Sbjct: 10 KFKLVFLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLI SYIRDSSVA++VYD+ NR SF+NT+RWI++++ ERG DVIIV+VGNKTDL +
Sbjct: 70 ERFRSLIASYIRDSSVAIVVYDITNRTSFINTNRWIDDIKAERGNDVIIVIVGNKTDLNN 129
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
KRQV+ EEG+ AKE MF+ETSAK G N+K LF++I LPG+ MVDVN
Sbjct: 130 KRQVTTEEGEKMAKELKTMFMETSAKTGHNVKALFKEITLILPGIGNAHDLNNSLMVDVN 189
Query: 189 L-KPTVNSSQTEQQ 201
+ + +N Q+ Q
Sbjct: 190 IGQREINPQQSNCQ 203
>gi|117938299|ref|NP_001071105.1| RAB6C-like [Homo sapiens]
gi|62702327|gb|AAX93251.1| unknown [Homo sapiens]
gi|63145796|gb|AAY33873.1| WTH3DI [Homo sapiens]
gi|112292965|dbj|BAF02860.1| Rab6C [Homo sapiens]
gi|151555103|gb|AAI48668.1| RAB6C-like [synthetic construct]
gi|157169764|gb|AAI53206.1| RAB6C-like [synthetic construct]
Length = 254
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 160/203 (78%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+ITRF YD FD TYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AV+VYD+ N SF T++WI++VRTE G DVII LVGNKT
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAK V FIET AKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ + +E GGC+C
Sbjct: 189 SDIKLEKPQEQTVSE---GGCSC 208
>gi|23820936|gb|AAN39685.1|AF309646_1 Rab6-like protein WTH3 [Homo sapiens]
gi|12052973|emb|CAB66661.1| hypothetical protein [Homo sapiens]
gi|49065364|emb|CAG38500.1| RAB6C [Homo sapiens]
gi|111306488|gb|AAI21000.1| RAB6C, member RAS oncogene family [Homo sapiens]
gi|117644696|emb|CAL37813.1| hypothetical protein [synthetic construct]
gi|117645978|emb|CAL38456.1| hypothetical protein [synthetic construct]
gi|117646278|emb|CAL38606.1| hypothetical protein [synthetic construct]
gi|117646424|emb|CAL38679.1| hypothetical protein [synthetic construct]
gi|208965414|dbj|BAG72721.1| RAB6C, member RAS oncogene family [synthetic construct]
Length = 254
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 160/203 (78%), Gaps = 3/203 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+ITRF YD FD TYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVS+EEG+ KAK V FIET AK G+N+K LFR++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSVEEGERKAKGLNVTFIETRAKTGYNVKQLFRRVAAALPGMESTQDGSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
D+ L+ + +E GGC+C
Sbjct: 189 SDIKLEKPQEQTVSE---GGCSC 208
>gi|225680073|gb|EEH18357.1| GTP-binding protein ryh1 [Paracoccidioides brasiliensis Pb03]
Length = 205
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 161/203 (79%), Gaps = 9/203 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK DRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKV----DRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D+R+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALPGM+ + M
Sbjct: 128 DLNDRREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMDDEAGRGANQM 187
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DVN+ PT S GCAC
Sbjct: 188 IDVNINPTQPVSND-----GCAC 205
>gi|110591381|pdb|2FE4|A Chain A, The Crystal Structure Of Human Neuronal Rab6b In Its
Inactive Gdp-Bound Form
gi|110591397|pdb|2FFQ|A Chain A, The Crystal Structure Of Human Neuronal Rab6b In Its
Active Gtpgs-Bound Form
gi|166235341|pdb|2E9S|A Chain A, Human Neuronal Rab6b In Three Intermediate Forms
gi|166235342|pdb|2E9S|B Chain B, Human Neuronal Rab6b In Three Intermediate Forms
gi|166235343|pdb|2E9S|C Chain C, Human Neuronal Rab6b In Three Intermediate Forms
Length = 171
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/163 (79%), Positives = 148/163 (90%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAG
Sbjct: 1 GKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 60
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL
Sbjct: 61 QERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLA 120
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
DKRQ++IEEG+ +AKE VMFIETSAK G+N+K LFR++A+AL
Sbjct: 121 DKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 163
>gi|259483929|tpe|CBF79720.1| TPA: hypothetical protein similar to small GTP-binding protein
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 184
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/169 (76%), Positives = 151/169 (89%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALP +
Sbjct: 132 DLSDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPDL 180
>gi|164655602|ref|XP_001728930.1| hypothetical protein MGL_3924 [Malassezia globosa CBS 7966]
gi|159102818|gb|EDP41716.1| hypothetical protein MGL_3924 [Malassezia globosa CBS 7966]
Length = 223
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 151/169 (89%), Gaps = 1/169 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+DRTVRLQLWD
Sbjct: 12 SAMRKFKLVFLGEQSVGKTSLITRFMYDTFDGNYQATIGIDFLSKTMYLDDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA++VYDV NR+SF +TS+W+E+VR ERG +VII LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSSVAIVVYDVTNRESFKSTSKWVEDVRAERGNEVIIALVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEF-GVMFIETSAKAGFNIKPLFRKIAAALPG 172
DL DKR+VS EEG+ +AKE+ VMF+ETSAKAG N+ PLF+KIA ALPG
Sbjct: 132 DLNDKREVSTEEGEQRAKEYNNVMFLETSAKAGHNVMPLFKKIAQALPG 180
>gi|327289792|ref|XP_003229608.1| PREDICTED: ras-related protein Rab-6A-like, partial [Anolis
carolinensis]
Length = 167
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/165 (77%), Positives = 146/165 (88%)
Query: 19 SVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
+VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSY
Sbjct: 3 TVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 62
Query: 79 IRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGD 138
IRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+
Sbjct: 63 IRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGE 122
Query: 139 GKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +ED
Sbjct: 123 RKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSRED 167
>gi|48766845|gb|AAT46563.1| Rab [Marsupenaeus japonicus]
Length = 214
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 144/159 (90%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIVLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLF 163
DL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LF
Sbjct: 127 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLF 165
>gi|403413298|emb|CCL99998.1| predicted protein [Fibroporia radiculosa]
Length = 231
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 148/172 (86%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S PL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSK MYLEDRTVRLQL
Sbjct: 11 SSPPLKRSKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDRTVRLQL 70
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQER+RSLIPSYIRD SVA++V+D+ NRQSFL+TS+WI++VR+ERG DVIIVLVGN
Sbjct: 71 WDTAGQERYRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGSDVIIVLVGN 130
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
K DL DKRQV +EE + KA + +MF+ETSAKAG N+K LF+KIA L GME
Sbjct: 131 KADLSDKRQVMLEEANTKATQLEIMFMETSAKAGHNVKSLFKKIAMELVGME 182
>gi|402225252|gb|EJU05313.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 160/206 (77%), Gaps = 4/206 (1%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S PL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQL
Sbjct: 12 SALPLKRTKIVLLGDQSVGKTSLITRFMYDTFDQTYQATIGIDFLSKTMYLEDRTVRLQL 71
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVA++V+D+ NR SFL+T++WI++VR+ERGGDVIIVLVGN
Sbjct: 72 WDTAGQERFRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGGDVIIVLVGN 131
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL + RQV+ EE K+ E ++++ETSAKAG N+K LF+KIA LPG E +E
Sbjct: 132 KADLSNDRQVTQEEAQQKSTELDIIYMETSAKAGHNVKTLFKKIAMLLPGNEKEGEQAKE 191
Query: 183 DMVDVNL-KPTVNSSQTEQQGGGCAC 207
+++ P N + Q CAC
Sbjct: 192 GNQKIDVTSPAKNET---PQASNCAC 214
>gi|126644156|ref|XP_001388214.1| RAB6 protein [Cryptosporidium parvum Iowa II]
gi|126117287|gb|EAZ51387.1| RAB6 protein, putative [Cryptosporidium parvum Iowa II]
Length = 219
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/181 (69%), Positives = 152/181 (83%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+S + ++K+K VFLG+QSVGKTSIITRFMYD FD YQATIGIDFLSKT+YLEDRT+RLQ
Sbjct: 5 SSRNQISKFKFVFLGEQSVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTIRLQ 64
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDSSVAV+VYD+ NR +FLNT++WIE+VR ERG DVII L+G
Sbjct: 65 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRSTFLNTTKWIEDVRNERGKDVIISLIG 124
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL D+RQV EE + A+E +MFIETSAK G+NIK LF+K+A+ LP ++ + K
Sbjct: 125 NKADLEDRRQVKYEEAEKLAQENNIMFIETSAKNGYNIKSLFKKLASTLPNLDYIQEGKN 184
Query: 182 E 182
E
Sbjct: 185 E 185
>gi|302892455|ref|XP_003045109.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726034|gb|EEU39396.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 164/205 (80%), Gaps = 13/205 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 125 DLNDKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGTDAAAQASS 184
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV T N+ Q+++ GCAC
Sbjct: 185 QMIDV---KTNNAQQSQE---GCAC 203
>gi|148684516|gb|EDL16463.1| RAB6, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149068774|gb|EDM18326.1| rCG39700, isoform CRA_c [Rattus norvegicus]
Length = 175
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 148/178 (83%), Gaps = 3/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+ KAKE VMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+ E GGC+C
Sbjct: 121 ETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVNE---GGCSC 175
>gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein [Plasmodium berghei]
gi|6759653|gb|AAF27979.1|AF093827_1 GTP binding protein [Plasmodium berghei]
Length = 207
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 162/203 (79%), Gaps = 2/203 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG DVIIVLVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D R+V+ EEG KA+E+ MF ETSAKAG NIK LF+KIAA LP +E ++ + ++
Sbjct: 127 DLADLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLEN-NNNHEANV 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
VD+ L +N+++ + C C
Sbjct: 186 VDIQLTNDMNNNE-KNMLSKCLC 207
>gi|82596931|ref|XP_726467.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii]
Length = 282
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 163/205 (79%), Gaps = 2/205 (0%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S S L KYKLVFLG+Q+VGKTSIITRFMYD FD YQ+TIGIDFLSKT+YL++ VRLQL
Sbjct: 80 SDSGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQL 139
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG DVIIVLVGN
Sbjct: 140 WDTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGN 199
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL D R+V+ EEG KA+E+ MF ETSAKAG NIK LF+KIAA LP +E ++ +
Sbjct: 200 KTDLADLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLEN-NNNHEA 258
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
++VD+ L +N+++ + C C
Sbjct: 259 NVVDIQLTNDMNNNE-KNILSKCLC 282
>gi|351708549|gb|EHB11468.1| Ras-related protein Rab-6B, partial [Heterocephalus glaber]
Length = 174
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 128/166 (77%), Positives = 148/166 (89%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
DL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K + ++A AL
Sbjct: 129 DLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQVRARLALAL 174
>gi|388583972|gb|EIM24273.1| GTP-binding protein ryh1 [Wallemia sebi CBS 633.66]
Length = 208
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 164/209 (78%), Gaps = 16/209 (7%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYL+DRT+RLQL
Sbjct: 12 SSQPLKKFKLVFLGEQSVGKTSLITRFMYDTFDKTYQATIGIDFLSKTMYLDDRTIRLQL 71
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAV+VYDV+N+ S+ NTS+WIEEV+ ERG DVIIVLVGN
Sbjct: 72 WDTAGQERFRSLIPSYIRDSSVAVVVYDVSNKNSYDNTSKWIEEVKQERGDDVIIVLVGN 131
Query: 123 KTDLVDKRQVSIEEGDGKAKEF----GVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
K DL +K E + + KE+ G++FIETSAK+GFN+K LF++IA ALP E
Sbjct: 132 KVDLSEK-----EVNNDQVKEYCDNNGILFIETSAKSGFNVKQLFKRIALALPASE---- 182
Query: 179 TKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
Q++ + N+K V++ Q +QQ C C
Sbjct: 183 --QDNSQNDNVKIQVDNQQADQQ-SSCNC 208
>gi|46111195|ref|XP_382655.1| hypothetical protein FG02479.1 [Gibberella zeae PH-1]
Length = 203
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 162/205 (79%), Gaps = 13/205 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL +KR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME + Q
Sbjct: 125 DLNEKREVTTQQGEEEAKKNNLMFVETSAKLGHNVKNLFKRIAQALPGMEGSDAAAQASN 184
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+D V ++ T+Q GCAC
Sbjct: 185 QMID------VKTNNTQQSQEGCAC 203
>gi|156049367|ref|XP_001590650.1| hypothetical protein SS1G_08390 [Sclerotinia sclerotiorum 1980]
gi|154692789|gb|EDN92527.1| hypothetical protein SS1G_08390 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 186
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 132/190 (69%), Positives = 155/190 (81%), Gaps = 7/190 (3%)
Query: 19 SVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
SVGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 3 SVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 62
Query: 79 IRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGD 138
IRDSSVAV+VYD++NR+SF NT +W+++VR ERG DVIIVLVGNKTDL DKR+V+ EG+
Sbjct: 63 IRDSSVAVVVYDISNRKSFQNTRKWVDDVRGERGNDVIIVLVGNKTDLNDKREVTTSEGE 122
Query: 139 GKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED-MVDVNLKPTVNSSQ 197
+AK+ +MFIETSAK G N+K LFR+IA ALPGME + + M+DVN+ PT + +
Sbjct: 123 EEAKKNNLMFIETSAKLGHNVKTLFRRIAQALPGMEGADNAATPNQMIDVNVNPTPVNQE 182
Query: 198 TEQQGGGCAC 207
GCAC
Sbjct: 183 ------GCAC 186
>gi|344030204|ref|NP_001230648.1| ras-related protein Rab-6A isoform c [Homo sapiens]
gi|402894607|ref|XP_003910445.1| PREDICTED: ras-related protein Rab-6A [Papio anubis]
gi|410972689|ref|XP_003992790.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Felis catus]
gi|441645568|ref|XP_004090672.1| PREDICTED: ras-related protein Rab-6A [Nomascus leucogenys]
Length = 175
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 148/178 (83%), Gaps = 3/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS+ AV+VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+ KAKE VMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAG+N+K LFR++AAALPGME+ +EDM+D+ L+ +E GGC+C
Sbjct: 121 ETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSE---GGCSC 175
>gi|226478096|emb|CAX72741.1| RAB family [Schistosoma japonicum]
gi|226478548|emb|CAX72769.1| RAB family [Schistosoma japonicum]
gi|257206356|emb|CAX82829.1| RAB family [Schistosoma japonicum]
gi|257206638|emb|CAX82947.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 158/201 (78%), Gaps = 1/201 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD F+ YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N +SF TS+WI++VR ERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR V+ EEG+ A + VMFIETSAKAG+N+K LFR+IA L E + + +D
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLKPTVNSSQTEQQGGGC 205
++V L + Q+ C
Sbjct: 185 IEVKLHDASKDTDFNQRVCWC 205
>gi|56757031|gb|AAW26687.1| SJCHGC02776 protein [Schistosoma japonicum]
gi|257206208|emb|CAX82755.1| RAB family [Schistosoma japonicum]
Length = 203
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 159/203 (78%), Gaps = 5/203 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD F+ YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N +SF TS+WI++VR ERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR V+ EEG+ A + VMFIETSAKAG+N+K LFR+IA L E + + +D
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDY 184
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
++ LKP E Q C C
Sbjct: 185 IE--LKPI--EPPQENQWKTCGC 203
>gi|56757515|gb|AAW26922.1| SJCHGC02777 protein [Schistosoma japonicum]
Length = 205
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 158/201 (78%), Gaps = 1/201 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD F+ YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N +SF TS+WI++VR ERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR V+ EEG+ A + VMFIETSAKAG+N+K LFR+IA L E + + +D
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLKPTVNSSQTEQQGGGC 205
++V L + Q+ C
Sbjct: 185 MEVKLHDASKDTDFNQRVCWC 205
>gi|221043662|dbj|BAH13508.1| unnamed protein product [Homo sapiens]
Length = 175
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 147/178 (82%), Gaps = 3/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS+ AV+VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+ KAKE VMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAG+N+K LFR++AAALPGME+ +EDM D+ L+ +E GGC+C
Sbjct: 121 ETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMTDIKLEKPQEQPVSE---GGCSC 175
>gi|355714968|gb|AES05180.1| RAB6A, member RAS oncoprotein family [Mustela putorius furo]
Length = 164
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/156 (82%), Positives = 143/156 (91%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIK 160
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVK 164
>gi|256085306|ref|XP_002578863.1| rab6 [Schistosoma mansoni]
gi|350645823|emb|CCD59585.1| rab6, putative [Schistosoma mansoni]
Length = 203
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 161/201 (80%), Gaps = 3/201 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMY+ FD YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLQKFKLVFLGEQSVGKTSLITRFMYETFDNLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSS AV+VYD+ N SF S+W+++VR ERGGDVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSAAVVVYDICNAGSFHQASKWVDDVRNERGGDVIIILVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ EEG+ AK+ VMFIETSAKAG+N+K LFR+IA L ++ S + +D
Sbjct: 126 DLSDKRKVTTEEGELLAKKLEVMFIETSAKAGYNVKVLFRRIATELVDQKSPLS-RHDDY 184
Query: 185 VDVNLKPTVNSSQTEQQGGGC 205
++ LKP + + + GC
Sbjct: 185 IE--LKPIEPPQENQWKTCGC 203
>gi|226478066|emb|CAX72726.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 158/201 (78%), Gaps = 1/201 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD F+ YQATIGI+FLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGEQSVGKTSLITRFMYDTFENLYQATIGINFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N +SF TS+WI++VR ERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR V+ EEG+ A + VMFIETSAKAG+N+K LFR+IA L E + + +D
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLKPTVNSSQTEQQGGGC 205
++V L + Q+ C
Sbjct: 185 IEVKLHDASKDTDFNQRVCWC 205
>gi|226478016|emb|CAX72701.1| RAB family [Schistosoma japonicum]
Length = 205
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 157/201 (78%), Gaps = 1/201 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG QSVGKTS+ITRFMYD F+ YQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 6 NPLRKFKLVFLGGQSVGKTSLITRFMYDTFENLYQATIGIDFLSKTMYLEDRTIRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ N +SF TS+WI++VR ERG DVII+LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIRDSSVAVVVYDICNAESFQLTSKWIDDVRNERGSDVIIMLVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR V+ EEG+ A + VMFIETSAKAG+N+K LFR+IA L E + + +D
Sbjct: 126 DLSDKRTVTTEEGERLAGQLNVMFIETSAKAGYNVKVLFRRIATELLNREN-PAPRHDDF 184
Query: 185 VDVNLKPTVNSSQTEQQGGGC 205
++V L + Q+ C
Sbjct: 185 IEVKLHDASKDTDFNQRVCWC 205
>gi|440472892|gb|ELQ41722.1| GTP-binding protein ryh1 [Magnaporthe oryzae Y34]
gi|440483954|gb|ELQ64166.1| GTP-binding protein ryh1 [Magnaporthe oryzae P131]
Length = 216
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 165/212 (77%), Gaps = 15/212 (7%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKT-------MYLEDRT 57
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK + T
Sbjct: 11 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDGMYQATIGIDFLSKASKPPAHPHRSSEST 70
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
VRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVII
Sbjct: 71 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVII 130
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
VLVGNKTDL DKR+V+ ++G+ +AK+ +MFIETSAK G N++PLF++IA +LPGME
Sbjct: 131 VLVGNKTDLNDKREVTTQQGEEEAKKNNLMFIETSAKVGHNVQPLFKRIARSLPGMEGTE 190
Query: 178 STKQ--EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ +Q M+DV N++Q +Q+ GCAC
Sbjct: 191 AAQQAASQMIDVK----TNNTQAQQE--GCAC 216
>gi|164429212|ref|XP_961894.2| GTP-binding protein ryh1 [Neurospora crassa OR74A]
gi|157072984|gb|EAA32658.2| GTP-binding protein ryh1 [Neurospora crassa OR74A]
Length = 218
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 137/216 (63%), Positives = 161/216 (74%), Gaps = 20/216 (9%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSK-----TMYLEDRTVR 59
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK TMYLEDRTVR
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKACSTPTMYLEDRTVR 69
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVL
Sbjct: 70 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVL 129
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDL DKR+V+ +G+ +A+ +MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 130 VGNKTDLNDKREVTTAQGEEEARRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTGGE 189
Query: 180 KQEDM--------VDVNLKPTVNSSQTEQQGGGCAC 207
+DV+ K TV GCAC
Sbjct: 190 GAGGAGTGAAATRIDVSSKETVAQE-------GCAC 218
>gi|336471794|gb|EGO59955.1| GTP-binding protein ryh1 [Neurospora tetrasperma FGSC 2508]
gi|350292910|gb|EGZ74105.1| GTP-binding protein ryh1 [Neurospora tetrasperma FGSC 2509]
Length = 218
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/216 (63%), Positives = 161/216 (74%), Gaps = 20/216 (9%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSK-----TMYLEDRTVR 59
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK TMYLEDRTVR
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKACSIPTMYLEDRTVR 69
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVL
Sbjct: 70 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAERGNDVIIVL 129
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDL DKR+V+ +G+ +A+ +MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 130 VGNKTDLNDKREVTTAQGEEEARRNNLMFVETSAKLGHNVKTLFKRIAQALPGMEGTGGE 189
Query: 180 KQEDM--------VDVNLKPTVNSSQTEQQGGGCAC 207
+DV+ K TV GCAC
Sbjct: 190 GAGGAGTGAAATRIDVSSKETVAQE-------GCAC 218
>gi|452825788|gb|EME32783.1| Rab family, other [Galdieria sulphuraria]
Length = 178
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/178 (70%), Positives = 144/178 (80%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYDKFD YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY
Sbjct: 1 MYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
DV NR SFL+ +RW+EEV+ ERG DV++VLVGNKTD ++RQVS EEG+ KAKE+G+MF+
Sbjct: 61 DVTNRASFLSVNRWLEEVKNERGEDVVLVLVGNKTDQAERRQVSTEEGEAKAKEYGIMFM 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAGFN+K LFRKIA+ALPGME++ MVD+ L T + C C
Sbjct: 121 ETSAKAGFNVKALFRKIASALPGMESVQEPSHMQMVDIKLNTTNTETTESNHVQRCRC 178
>gi|431838418|gb|ELK00350.1| Ras-related protein Rab-6A [Pteropus alecto]
Length = 171
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/158 (79%), Positives = 143/158 (90%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPL 162
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K +
Sbjct: 129 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQV 166
>gi|154286400|ref|XP_001543995.1| GTP-binding protein ryh1 [Ajellomyces capsulatus NAm1]
gi|150407636|gb|EDN03177.1| GTP-binding protein ryh1 [Ajellomyces capsulatus NAm1]
Length = 232
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/204 (65%), Positives = 157/204 (76%), Gaps = 18/204 (8%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSK--------------- 49
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKVGSQPSSNRPPRLPF 71
Query: 50 ---TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEE 106
TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++
Sbjct: 72 IMGTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDD 131
Query: 107 VRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKI 166
VR ERG DVIIVLVGNKTDL D+R+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+I
Sbjct: 132 VRGERGNDVIIVLVGNKTDLNDRREVTTAQGEEEAKKHGLMFIETSAKVGHNVKQLFRRI 191
Query: 167 AAALPGMETLSSTKQEDMVDVNLK 190
A ALPGM+ S E D + K
Sbjct: 192 AQALPGMDDESGRACEQRWDAHAK 215
>gi|209880834|ref|XP_002141856.1| Ras family protein Rab-6A [Cryptosporidium muris RN66]
gi|209557462|gb|EEA07507.1| Ras family protein Rab-6A, putative [Cryptosporidium muris RN66]
Length = 220
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 147/171 (85%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ L K+K VFLG+QSVGKTSIITRFMYD FD YQATIGIDFLSKT+YLEDRT+RLQLWD
Sbjct: 8 NQLNKFKFVFLGEQSVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTIRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD+ NR ++LNT++WIE+VR ERG DVII LVGNK
Sbjct: 68 TAGQERFRSLIPSYIRDSSVAVVVYDITNRSTYLNTTKWIEDVRNERGKDVIIALVGNKA 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
DL DKRQV +EG+ A + ++FIETSAK G+NIK +FRK+A+ LP +E+
Sbjct: 128 DLDDKRQVRYDEGEKLANDNDIIFIETSAKNGYNIKSIFRKLASTLPTLES 178
>gi|340521862|gb|EGR52096.1| Ras-like GTP-binding protein [Trichoderma reesei QM6a]
Length = 203
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 162/205 (79%), Gaps = 13/205 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK G+ F+ETSAK G N++ LF++IA ALPGME + Q
Sbjct: 125 DLNDKREVTTQQGEEEAKRQGLRFVETSAKLGHNVQNLFKRIAQALPGMEGSDAAAQATN 184
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV N++Q Q+ GC+C
Sbjct: 185 QMIDVR----TNTTQPPQE--GCSC 203
>gi|449683751|ref|XP_002159099.2| PREDICTED: ras-related protein Rab-6A-like [Hydra magnipapillata]
Length = 176
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF TS+WI++VR ERG DVII+LVGNKTDL +KRQV+ E G+ KAKE VMFI
Sbjct: 61 DITNVNSFQQTSKWIDDVRVERGSDVIIMLVGNKTDLAEKRQVATESGEAKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAG N+K LFRK+A+ALPGME + K+ED+++V LK Q Q+G GC C
Sbjct: 121 ETSAKAGHNVKQLFRKVASALPGMEN-TPDKKEDLIEVTLKDNP-QDQNNQEGRGCPC 176
>gi|389583987|dbj|GAB66721.1| small GTPase Rab6 [Plasmodium cynomolgi strain B]
Length = 207
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 161/204 (78%), Gaps = 4/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG DVII LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D R+V+ EEG KA+E+ MF ETSAKAG NIK LF+KIAA LP ++ S++ ++
Sbjct: 127 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLDN-SNSNDANV 185
Query: 185 VDVNLKPTVNSSQTEQQG-GGCAC 207
VD+ L T N++ E+ C C
Sbjct: 186 VDIQL--TNNAAANEKNMLSKCMC 207
>gi|157817539|ref|NP_001102245.1| ras-related protein Rab-6B [Rattus norvegicus]
gi|194221614|ref|XP_001496020.2| PREDICTED: ras-related protein Rab-6B-like [Equus caballus]
gi|345789199|ref|XP_853481.2| PREDICTED: ras-related protein Rab-6B [Canis lupus familiaris]
gi|149018752|gb|EDL77393.1| RAB6B, member RAS oncogene family (predicted) [Rattus norvegicus]
Length = 175
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/178 (69%), Positives = 146/178 (82%), Gaps = 3/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IEEG+ +AKE VMFI
Sbjct: 61 DITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAK G+N+K LFR++A+ALPGME + +E M+D+ L +E GGC+C
Sbjct: 121 ETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASE---GGCSC 175
>gi|258597414|ref|XP_001348128.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
gi|254832720|gb|AAN36041.2| PfRab6, GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 162/204 (79%), Gaps = 4/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG DVII LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D R+V+ EEG KA+E+ MF ETSAKAG NIK LF+KIA+ LP ++ ++ + ++
Sbjct: 127 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNLDN-TNNNEANV 185
Query: 185 VDVNLKPTVNSSQTEQQG-GGCAC 207
VD+ L T NS++ ++ C C
Sbjct: 186 VDIQL--TNNSNKNDKNMLSKCLC 207
>gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum]
Length = 240
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 162/204 (79%), Gaps = 4/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 40 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 99
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG DVII LVGNKT
Sbjct: 100 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 159
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D R+V+ EEG KA+E+ MF ETSAKAG NIK LF+KIA+ LP ++ ++ + ++
Sbjct: 160 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKLPNLDN-TNNNEANV 218
Query: 185 VDVNLKPTVNSSQTEQQG-GGCAC 207
VD+ L T NS++ ++ C C
Sbjct: 219 VDIQL--TNNSNKNDKNMLSKCLC 240
>gi|358378155|gb|EHK15837.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 158/205 (77%), Gaps = 13/205 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK DRTVRLQLWD
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSK-----DRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 124
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--E 182
DL DKR+V+ ++G+ +AK G+ F+ETSAK G N++ LF++IA ALPGME + Q
Sbjct: 125 DLNDKREVTTQQGEEEAKRQGLRFVETSAKLGHNVQNLFKRIAQALPGMEGSDAAAQATN 184
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV T + GC+C
Sbjct: 185 QMIDVRTNTTAPPQE------GCSC 203
>gi|348515489|ref|XP_003445272.1| PREDICTED: ras-related protein Rab-6A-like isoform 3 [Oreochromis
niloticus]
Length = 179
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/156 (78%), Positives = 141/156 (90%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 12 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS++AV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIK 160
DL DKRQVS+E + KA+E VM+IETSAKAG+N+K
Sbjct: 132 DLADKRQVSVEAAERKARELNVMYIETSAKAGYNVK 167
>gi|213515204|ref|NP_001133402.1| Ras-related protein Rab-6C [Salmo salar]
gi|209153591|gb|ACI33170.1| Ras-related protein Rab-6C [Salmo salar]
Length = 175
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 146/178 (82%), Gaps = 3/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS++AV+VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTIAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQ++ EEG+ +AKE VMFI
Sbjct: 61 DITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITTEEGEQRAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAK G+N+K LFR++AAALPGM++ +EDM+D+ L+ + TE C+C
Sbjct: 121 ETSAKTGYNVKQLFRRVAAALPGMDSTPEKSKEDMIDIKLEKPPEMAVTE---SSCSC 175
>gi|47550805|ref|NP_999930.1| RAB6A, member RAS oncogene family [Danio rerio]
gi|27881933|gb|AAH44491.1| RAB6A, member RAS oncogene family [Danio rerio]
Length = 181
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 152/203 (74%), Gaps = 30/203 (14%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+ VII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVV---------------------------VIIMLVGNKT 101
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 102 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDM 161
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ +E GGC+C
Sbjct: 162 IDIKLEKPPEQPVSE---GGCSC 181
>gi|443914817|gb|ELU36556.1| ryh1 [Rhizoctonia solani AG-1 IA]
Length = 189
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/170 (72%), Positives = 146/170 (85%), Gaps = 5/170 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL + K+V LGDQSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYL+DRTVRLQLWD
Sbjct: 13 APLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLDDRTVRLQLWD 72
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVA++VYD+ + +++WI++VR+ERG DVIIVLVGNK
Sbjct: 73 TAGQERFRSLIPSYIRDSSVAIVVYDITSE-----SAKWIDDVRSERGTDVIIVLVGNKA 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL DKRQV++EE +A E +MF+ETSAKAG N+K LF+KIA +LPGME
Sbjct: 128 DLSDKRQVTMEEATQRANELNIMFMETSAKAGHNVKTLFKKIAMSLPGME 177
>gi|1628428|emb|CAA63555.1| GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 161/204 (78%), Gaps = 4/204 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG DVII LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL D R+V+ EEG KA+E+ MF ETSAKAG NIK LF+K A+ LP ++ ++ + ++
Sbjct: 127 DLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKLPNLDN-TNNNEANV 185
Query: 185 VDVNLKPTVNSSQTEQQG-GGCAC 207
VD+ L T NS++ ++ C C
Sbjct: 186 VDIQL--TNNSNKNDKNMLSKCLC 207
>gi|405123513|gb|AFR98277.1| Rab6 GTPase [Cryptococcus neoformans var. grubii H99]
Length = 210
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 162/210 (77%), Gaps = 17/210 (8%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV-RL 60
++ +PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+ +L
Sbjct: 14 SASTPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTLGKL 73
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QL ERFRSLIPSYIRDSSVAVIVYD+ NR SF NTS+W+++VR ERG DVIIVLV
Sbjct: 74 QL----SIERFRSLIPSYIRDSSVAVIVYDITNRTSFQNTSKWVDDVRNERGQDVIIVLV 129
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG---METLS 177
GNKTDL DKRQV+ E+ D +AKE GVM IETSAKAG N+K LF+KIA ALPG +
Sbjct: 130 GNKTDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIALALPGGSEAKDNG 189
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+TK +DV+ P Q Q GC+C
Sbjct: 190 TTK----IDVSASP-----QEVPQASGCSC 210
>gi|384493318|gb|EIE83809.1| GTP-binding protein Ryh1 [Rhizopus delemar RA 99-880]
Length = 203
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 157/204 (76%), Gaps = 9/204 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QS K + Y + ATIGIDFLSKTMYL+DRT+RLQLWD
Sbjct: 8 NPLKKFKLVFLGEQSGNKQNWKNIAHYKIY-----ATIGIDFLSKTMYLDDRTIRLQLWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSV V+VYD+ +R SFLNTS+WI++VR ERG DVIIVLVGNKT
Sbjct: 63 TAGQERFRSLIPSYIRDSSVCVVVYDITSRSSFLNTSKWIDDVRAERGTDVIIVLVGNKT 122
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ-ED 183
DL DKRQV++EEG+ KAK++ +MFIETSAKAG+NIK +FRKI ALPGME + Q E
Sbjct: 123 DLNDKRQVTVEEGEKKAKDYNIMFIETSAKAGYNIKAMFRKIGHALPGMENNAEDGQKEQ 182
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
+ V+L T S ++ GCAC
Sbjct: 183 LTKVDLTDT---STRNEEASGCAC 203
>gi|348501272|ref|XP_003438194.1| PREDICTED: ras-related protein Rab-6B-like isoform 2 [Oreochromis
niloticus]
Length = 185
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 151/203 (74%), Gaps = 26/203 (12%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+ RG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVV-----------------------RGSDVIIMLVGNKT 105
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KRQ++IEEG+ +AKE VMFIETSAK G N+K LFR++AAALPGME+L E M
Sbjct: 106 DLEEKRQITIEEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAALPGMESLDDANPEGM 165
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L + E GGC+C
Sbjct: 166 IDIKLDKPAEPAVPE---GGCSC 185
>gi|167524248|ref|XP_001746460.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775222|gb|EDQ88847.1| predicted protein [Monosiga brevicollis MX1]
Length = 214
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 157/210 (74%), Gaps = 8/210 (3%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYD---KFDTTY---QATIGIDFLSKTMYLEDRT 57
+PL K+KLVFLG+QS + + D + Y QATIGIDFLSKTMYLEDRT
Sbjct: 7 ANPLRKFKLVFLGEQSGTLSPCKAQSEPDLPAPHSSLYAWTQATIGIDFLSKTMYLEDRT 66
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
VRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD+ NR SF TS+WI++VR ERG DV+I
Sbjct: 67 VRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRNSFQQTSKWIDDVRAERGSDVVI 126
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL DKR+VS+EEG+ KAKE VMFIETSAKAG N+K LF+++AAALPGME+ +
Sbjct: 127 MLVGNKTDLNDKREVSLEEGEAKAKELNVMFIETSAKAGHNVKQLFKRVAAALPGMESTA 186
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+E + +K T S Q Q C+C
Sbjct: 187 EANKETEAPLTVKITETSDQ--QPASACSC 214
>gi|91089681|ref|XP_974614.1| PREDICTED: similar to Rab-protein 6 CG6601-PA [Tribolium castaneum]
gi|270012633|gb|EFA09081.1| hypothetical protein TcasGA2_TC006800 [Tribolium castaneum]
Length = 210
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 155/205 (75%), Gaps = 12/205 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYKLVFLG+QSVGKTSIIT+FMYD FDT YQAT+GIDFLSKTMYL D+TVRLQLWDTA
Sbjct: 14 LQKYKLVFLGEQSVGKTSIITKFMYDSFDTAYQATVGIDFLSKTMYLTDKTVRLQLWDTA 73
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIP+YIRDSSVAV+V+DV N ++F T++WI +VR ERG VI+ LVGNK DL
Sbjct: 74 GQERFRSLIPAYIRDSSVAVVVFDVTNIETFHQTTKWINDVRMERGDSVIVFLVGNKVDL 133
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
D RQVSIEEG+ KAKE V F+ETSAK G NIK LF++I +L E S ++ +
Sbjct: 134 KDLRQVSIEEGEQKAKELNVTFVETSAKVGLNIKQLFKRITESLVVCEEPKSDNSSELQE 193
Query: 187 VNLKP----TVNSSQTEQQGGGCAC 207
V+L T+++S CAC
Sbjct: 194 VSLGKNGLVTIDNS--------CAC 210
>gi|336265072|ref|XP_003347310.1| hypothetical protein SMAC_07167 [Sordaria macrospora k-hell]
gi|380088515|emb|CCC13542.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 232
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 161/230 (70%), Gaps = 34/230 (14%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSK--------------- 49
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD YQATIGIDFLSK
Sbjct: 10 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNMYQATIGIDFLSKACSTPLDRAAPEGHN 69
Query: 50 ---TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEE 106
TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++
Sbjct: 70 GRRTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDD 129
Query: 107 VRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKI 166
VR ERG DVIIVLVGNKTDL DKR+V+ +G+ +A+ +MF+ETSAK G N+K LF++I
Sbjct: 130 VRAERGNDVIIVLVGNKTDLNDKREVTTAQGEEEARRNNLMFVETSAKLGHNVKTLFKRI 189
Query: 167 AAALPGMETLSSTKQEDM---------VDVNLKPTVNSSQTEQQGGGCAC 207
A ALPGME +DV+ K TV GCAC
Sbjct: 190 AQALPGMEGTGGEGGAAGGQGGGAATRIDVSSKETVAQE-------GCAC 232
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
Length = 215
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 159/209 (76%), Gaps = 9/209 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG-DVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYD+ ++SF +WIE+V+TERG +VI+ +VGNK+D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKTERGSENVILCIVGNKSD 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
L D+RQV+ EEG+ KAKE G +F+ETS KAG N+K LF+KIA +LP + ST +D
Sbjct: 128 LSDERQVTTEEGEAKAKELGATIFMETSTKAGHNVKNLFKKIAKSLPEFQNSDSTPLDDN 187
Query: 185 VDVNLKPT------VNSSQTEQQGGGCAC 207
+ N ++S++ E Q G C C
Sbjct: 188 NESNTANNKAQVIDISSTENENQ-GNCQC 215
>gi|290462723|gb|ADD24409.1| Ras-related protein Rab-6A [Lepeophtheirus salmonis]
Length = 160
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 135/152 (88%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD N SF TS+WI++VRTERG D II+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDTTNANSFHQTSKWIDDVRTERGSDAIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAG 156
DL +KRQV E+G+ KAKE VMFIETSAKAG
Sbjct: 129 DLSEKRQVPTEDGERKAKELNVMFIETSAKAG 160
>gi|323446136|gb|EGB02421.1| hypothetical protein AURANDRAFT_35265 [Aureococcus anophagefferens]
Length = 213
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 158/205 (77%), Gaps = 4/205 (1%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++PLAKYKLVFLGDQ VGKT II RF+YD FD YQATIGIDFLSKTMYLEDRTVRLQLW
Sbjct: 12 LAPLAKYKLVFLGDQGVGKTCIINRFVYDSFDKNYQATIGIDFLSKTMYLEDRTVRLQLW 71
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDSSVAV+VYD R SFL++S+WI +VR ERG DV++VLVGNK
Sbjct: 72 DTAGQERFRSLIPSYIRDSSVAVVVYDTTARASFLDSSKWIADVRAERGDDVVVVLVGNK 131
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDL D+RQVS+EEG+ KA+ ++F+ETSAKAG N+K LFR +AAA + +
Sbjct: 132 TDLADRRQVSVEEGEAKARAERILFVETSAKAGVNVKRLFRDVAAA---LPGAAGAPPPA 188
Query: 184 MVDVNLKPTVNSSQTEQQGGG-CAC 207
V++K T N + G CAC
Sbjct: 189 AGLVDIKLTANPNGAGDDGAAKCAC 213
>gi|403337670|gb|EJY68057.1| Rab6 [Oxytricha trifallax]
gi|403366411|gb|EJY83007.1| Rab6 [Oxytricha trifallax]
Length = 235
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 144/175 (82%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYK+VFLGDQSVGKTS+I RF D FD YQATIGIDFLSKTMY++D+ VRLQLWDTAGQ
Sbjct: 13 KYKIVFLGDQSVGKTSLILRFTQDTFDGNYQATIGIDFLSKTMYVDDKMVRLQLWDTAGQ 72
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIPSYI+DSSVAV+VYD+ N+ SF N +WI++ + RG D++I+LVGNK D+ +
Sbjct: 73 ERFRSLIPSYIKDSSVAVVVYDITNKFSFTNVQKWIDDAKAIRGNDLLIILVGNKIDMAE 132
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
KRQV EEG AKE GVMFIETSAKAG NI+ LF+ +A +LPGME+ +T++ D
Sbjct: 133 KRQVGTEEGQALAKELGVMFIETSAKAGINIRQLFQNLATSLPGMESAGATRKGD 187
>gi|50547479|ref|XP_501209.1| YALI0B22154p [Yarrowia lipolytica]
gi|49647075|emb|CAG83462.1| YALI0B22154p [Yarrowia lipolytica CLIB122]
Length = 200
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 156/207 (75%), Gaps = 7/207 (3%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M + K+KLV +G+QSVGKTS+ITR MYDKFD Y+ATIGI FLSK MYL DRT+RL
Sbjct: 1 MTETGQIQKFKLVIVGEQSVGKTSLITRIMYDKFDQNYEATIGIQFLSKPMYLPDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSL+P+YIRDS +A++VY + +R+SF++ +WIE+V+ ERG V+++LV
Sbjct: 61 QLWDTAGQERFRSLVPAYIRDSHIAIVVYAIDSRKSFVDVDKWIEDVKAERGNQVVLMLV 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNK+DL + R+V+ EEG KAK++ +F+ETSAKAG N+K + K+A+ LPG+ET T
Sbjct: 121 GNKSDLEESREVTTEEGQEKAKQYDALFLETSAKAGHNVKSILNKVASELPGLETALKTD 180
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
Q +++DVN+ E + C+C
Sbjct: 181 QSELIDVNIT-------NEPEQDSCSC 200
>gi|6808528|gb|AAF28422.1|AF124200_1 Rab6-like protein [Homo sapiens]
Length = 175
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/167 (71%), Positives = 140/167 (83%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+ITRF YD FD TYQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIP YIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII LVGN+T
Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL DKRQVS+EEG+ KAK V FIET AK G+N+K LFR++AAALP
Sbjct: 129 DLADKRQVSVEEGERKAKGLNVTFIETRAKTGYNVKQLFRRVAAALP 175
>gi|121716549|ref|XP_001275840.1| rab6 [Aspergillus clavatus NRRL 1]
gi|119403997|gb|EAW14414.1| rab6 [Aspergillus clavatus NRRL 1]
Length = 229
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 156/231 (67%), Gaps = 46/231 (19%)
Query: 17 DQSVGKTSIITRFMYDKFDTTYQATIGIDFLSK--------------------------- 49
D VGKTS+ITRFMYD FD TYQATIGIDFLSK
Sbjct: 5 DTIVGKTSLITRFMYDSFDNTYQATIGIDFLSKVYSILAPIPMTLSGSTPACFCVALHLQ 64
Query: 50 -------------TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQS 96
TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +S
Sbjct: 65 PVHIELIFGFAHQTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKS 124
Query: 97 FLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAG 156
F NT +WI++VR ERG DVIIVLVGNKTDL DKR+V+ +G+ +AK+ G+MFIETSAK G
Sbjct: 125 FQNTRKWIDDVRGERGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVG 184
Query: 157 FNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
N+K LFR+IA ALPGME + ++ M+DVN+ P +S GCAC
Sbjct: 185 HNVKQLFRRIAQALPGMEG-EANRESQMIDVNISPKETTSN-----DGCAC 229
>gi|344296898|ref|XP_003420139.1| PREDICTED: ras-related protein Rab-6A-like [Loxodonta africana]
Length = 363
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/170 (70%), Positives = 142/170 (83%), Gaps = 3/170 (1%)
Query: 38 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSF 97
++ATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS+ AV+VYD+ N SF
Sbjct: 197 WEATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSF 256
Query: 98 LNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGF 157
T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+ KAKE VMFIETSAKAG+
Sbjct: 257 QQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGY 316
Query: 158 NIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
N+K LFR++AAALPGME+ +EDM+D+ L+ +E GGC+C
Sbjct: 317 NVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSE---GGCSC 363
>gi|441621491|ref|XP_003265428.2| PREDICTED: uncharacterized protein LOC100590410 [Nomascus
leucogenys]
Length = 474
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 143/189 (75%), Gaps = 20/189 (10%)
Query: 19 SVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 78
SVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY
Sbjct: 306 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 365
Query: 79 IRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGD 138
IRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IEEG+
Sbjct: 366 IRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGE 425
Query: 139 GKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQT 198
+AKE VMFIETSAK G+N+K +E M+D+ L +
Sbjct: 426 QRAKELSVMFIETSAKTGYNVK-----------------QKSKEGMIDIKLDKPQEPPAS 468
Query: 199 EQQGGGCAC 207
E GGC+C
Sbjct: 469 E---GGCSC 474
>gi|322709933|gb|EFZ01508.1| RAS small monomeric GTPase Rab6 [Metarhizium anisopliae ARSEF 23]
Length = 234
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/170 (69%), Positives = 144/170 (84%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P+ + + +VGKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 31 NPIPGMSMELIPSYAVGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWD 90
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 91 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKT 150
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR+V+ ++G+ +AK+ +MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 151 DLNEKREVTTQQGEDEAKKNNLMFMETSAKLGHNVKNLFKRIAQALPGME 200
>gi|254579943|ref|XP_002495957.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
gi|238938848|emb|CAR27024.1| ZYRO0C07062p [Zygosaccharomyces rouxii]
Length = 214
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 158/205 (77%), Gaps = 4/205 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 10 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYD+ R+SF +WIE+V+ ERG +VI+ +VGNK+D
Sbjct: 70 GQERFRSLIPSYIRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGEENVILCIVGNKSD 129
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
L D+RQVS EEG+ KAK G +F+ETS KAG+N+K LF++IA +LP + +T +D
Sbjct: 130 LSDERQVSTEEGETKAKVLGAKIFMETSTKAGYNVKNLFKRIAKSLPEFQESPNTGVKDD 189
Query: 185 VDVNLKPTVN--SSQTEQQGGGCAC 207
+ N ++ +++ EQQ C C
Sbjct: 190 SNENNAGVIDITTNEEEQQASSCQC 214
>gi|448090573|ref|XP_004197105.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|448094995|ref|XP_004198136.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|359378527|emb|CCE84786.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|359379558|emb|CCE83755.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 5/199 (2%)
Query: 5 SPLAKYKLVFLGDQS-VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQL 62
S L KYK+VFLGDQS VGKTS+ITRFMYD FD Y ATIGIDFLSKTMYLED +T+RLQL
Sbjct: 8 SVLRKYKIVFLGDQSAVGKTSLITRFMYDTFDDQYAATIGIDFLSKTMYLEDNKTIRLQL 67
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDS VAV+ YD+ NR+SF N +WI++V++ERG DVIIV+VGN
Sbjct: 68 WDTAGQERFRSLIPSYIRDSHVAVVCYDITNRKSFQNLHKWIQDVKSERGEDVIIVIVGN 127
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMF-IETSAKAGFNIKPLFRKIAAALPGMETLS--ST 179
K DL +RQV+ EEG+ AK G F IETS KA N+K LF+KIA++LP E+ + ++
Sbjct: 128 KLDLNARRQVTSEEGEEYAKSVGASFSIETSTKANHNVKLLFKKIASSLPEFESTAQNNS 187
Query: 180 KQEDMVDVNLKPTVNSSQT 198
Q + V++N++P+ S +
Sbjct: 188 SQSETVEINVEPSAPESSS 206
>gi|255712777|ref|XP_002552671.1| KLTH0C10384p [Lachancea thermotolerans]
gi|238934050|emb|CAR22233.1| KLTH0C10384p [Lachancea thermotolerans CBS 6340]
Length = 234
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 31 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 90
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYDV N++SF +W+E+V++ERG +V++ +VGNK D
Sbjct: 91 GQERFRSLIPSYIRDSHVAIVVYDVTNKKSFEYIDKWVEDVKSERGEENVVLCIVGNKND 150
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
L D+RQVS EEG+ KA+ +FIETS K GFN+K LFRKIA LP + S +D
Sbjct: 151 LSDERQVSTEEGERKAQVLNAKIFIETSTKVGFNVKNLFRKIAKTLPEFQKSDSVPLDDN 210
Query: 185 VDVNLKPTV--NSSQTEQQGGGCAC 207
N KP V ++ EQ+ C C
Sbjct: 211 ATKN-KPDVIDITTNEEQEQSSCQC 234
>gi|426337217|ref|XP_004032617.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-6C-like
[Gorilla gorilla gorilla]
Length = 278
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 126/201 (62%), Positives = 150/201 (74%), Gaps = 3/201 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSV KTS+IT YQA IGIDFLSKTMYLED T+ L+LWD
Sbjct: 9 NPLRKFKLVFLGEQSVAKTSLITEXXXXXXXXXYQAIIGIDFLSKTMYLEDGTIGLRLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER RSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTE G DVII LVGN+T
Sbjct: 69 TAGQERLRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVIITLVGNRT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAK V FIET AKAG+N+K LF ++AAALPGME+ +EDM
Sbjct: 129 DLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFGRVAAALPGMESTQDRSREDM 188
Query: 185 VDVNLKPTVNSSQTEQQGGGC 205
D+ L+ +E GGC
Sbjct: 189 SDIKLEKPQEQPVSE---GGC 206
>gi|6323291|ref|NP_013363.1| Ypt6p [Saccharomyces cerevisiae S288c]
gi|2500077|sp|Q99260.1|YPT6_YEAST RecName: Full=GTP-binding protein YPT6
gi|577182|gb|AAB67381.1| Ylr262cp [Saccharomyces cerevisiae]
gi|927545|emb|CAA42166.1| Ypt6p [Saccharomyces cerevisiae]
gi|45269764|gb|AAS56262.1| YLR262C [Saccharomyces cerevisiae]
gi|151941095|gb|EDN59475.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405321|gb|EDV08588.1| GTP-binding protein YPT6 [Saccharomyces cerevisiae RM11-1a]
gi|207342890|gb|EDZ70519.1| YLR262Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148244|emb|CAY81491.1| Ypt6p [Saccharomyces cerevisiae EC1118]
gi|285813678|tpg|DAA09574.1| TPA: Ypt6p [Saccharomyces cerevisiae S288c]
gi|392297767|gb|EIW08866.1| Ypt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 157/208 (75%), Gaps = 7/208 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG-DVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+IVYD+ R+SF +WIE+V+ ERG +VI+ +VGNK+D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSD 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST--KQE 182
L D+RQ+S EEG+ KAK G +F+ETS KAG+N+K LF+KIA +LP + ST E
Sbjct: 128 LSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSLPEFQNSESTPLDSE 187
Query: 183 DMVDVNL-KPTV--NSSQTEQQGGGCAC 207
+ N KP V S+ EQ+ C C
Sbjct: 188 NANSANQNKPGVIDISTAEEQEQSACQC 215
>gi|395732216|ref|XP_003776036.1| PREDICTED: ras-related protein Rab-6C-like [Pongo abelii]
Length = 221
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 120/178 (67%), Positives = 140/178 (78%), Gaps = 3/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLED T+RL+LWDTAGQER RSLIPSY RDS+ AV VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDGTIRLRLWDTAGQERLRSLIPSYSRDSAAAVAVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF T++WI++VRTERG DVII LVGNKTDL DKRQVSIE+G+ KAKE VMFI
Sbjct: 61 DITNVNSFQQTTKWIDDVRTERGSDVIITLVGNKTDLADKRQVSIEDGERKAKELNVMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ET AKAG+N+K LFR++AA LPGME+ +EDM D+ L+ +E GGC+C
Sbjct: 121 ETRAKAGYNVKQLFRRVAAVLPGMESTQDRSREDMSDIKLEKPQEQPVSE---GGCSC 175
>gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/198 (62%), Positives = 153/198 (77%), Gaps = 10/198 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD-VIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYD+ ++SF +WIE+V+ ERG D VI+ +VGNK+D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIVVYDITKKKSFDCIDKWIEDVKNERGEDNVILCVVGNKSD 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
L D+RQVS E+G+ KAKE G +F+ETS KAG+N+K LF+KIA +LP + ST
Sbjct: 128 LTDERQVSTEDGEKKAKELGAKIFMETSTKAGYNVKNLFKKIAKSLPEFQNSESTP---- 183
Query: 185 VDVNLKPTVNSSQTEQQG 202
L T NS T++ G
Sbjct: 184 ----LDETENSDNTKKTG 197
>gi|366992854|ref|XP_003676192.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS 4309]
gi|342302058|emb|CCC69831.1| hypothetical protein NCAS_0D02500 [Naumovozyma castellii CBS 4309]
Length = 222
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 162/221 (73%), Gaps = 18/221 (8%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQL
Sbjct: 4 SGKALTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQL 63
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD-VIIVLVG 121
WDTAGQERFRSLIPSYIRDS VA++VYD+ ++SF +WIE+V+ ERG D VI+ +VG
Sbjct: 64 WDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKNERGDDNVILCIVG 123
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
NK+DL D+RQV+IEEG+ KAK G +F+ETS KAG+N+K LF+KIA +LP + S T
Sbjct: 124 NKSDLSDERQVTIEEGENKAKILGADIFMETSTKAGYNVKNLFKKIAKSLPEFQN-SDTN 182
Query: 181 QEDMVDVNLKPT--------------VNSSQTEQQGGGCAC 207
D D N K +++++ ++Q GGC C
Sbjct: 183 PLD-TDGNGKNNKANESSGDKPGIIDISTNEEQEQAGGCQC 222
>gi|294657272|ref|XP_459580.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
gi|199432566|emb|CAG87807.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
Length = 204
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 157/201 (78%), Gaps = 5/201 (2%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVR 59
M + L KYK+VFLGDQSVGKTS+ITRFMYD FD Y ATIGIDFLSKTMYLED +T+R
Sbjct: 1 MDKSNILRKYKIVFLGDQSVGKTSLITRFMYDTFDDQYAATIGIDFLSKTMYLEDNKTIR 60
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDS VAVI YD+ N++SF N ++WI++V+ ERG DVIIV+
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSHVAVICYDITNKKSFENLNKWIQDVKLERGDDVIIVV 120
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEF-GVMFIETSAKAGFNIKPLFRKIAAALPGME--TL 176
VGNK+DL +KRQV++EE + K G IETS KA N+K LF+KIA++LP +E T
Sbjct: 121 VGNKSDLNNKRQVTMEECEAYLKSINGKFCIETSTKANHNVKQLFKKIASSLPDVEKSTK 180
Query: 177 SSTKQEDMVDVNL-KPTVNSS 196
T Q + VD+N+ +P V ++
Sbjct: 181 DETTQPETVDINIEQPKVENN 201
>gi|259906587|gb|ACW84383.1| GTPase, partial [Fenneropenaeus chinensis]
Length = 155
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/149 (81%), Positives = 132/149 (88%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL LVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLNVISLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKT
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 126
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSA 153
DL DKRQVS EEG+ KAKE VMFIETSA
Sbjct: 127 DLSDKRQVSTEEGERKAKELNVMFIETSA 155
>gi|349579968|dbj|GAA25129.1| K7_Ypt6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 215
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 157/208 (75%), Gaps = 7/208 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG-DVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+IVYD+ R+SF +WIE+V+ ERG +VI+ +VGNK+D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSD 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST--KQE 182
L D+RQ+S EEG+ KA+ G +F+ETS KAG+N+K LF+KIA +LP + ST E
Sbjct: 128 LSDERQISTEEGEKKAELLGAKIFMETSTKAGYNVKALFKKIAKSLPEFQNSESTPLDNE 187
Query: 183 DMVDVNL-KPTV--NSSQTEQQGGGCAC 207
+ N KP V S+ EQ+ C C
Sbjct: 188 NANSANQNKPGVIDISTAEEQEQSACQC 215
>gi|449284060|gb|EMC90642.1| Ras-related protein Rab-6A, partial [Columba livia]
Length = 187
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 147/190 (77%), Gaps = 5/190 (2%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYI
Sbjct: 1 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 60
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+ AV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+
Sbjct: 61 RDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 120
Query: 140 KAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM--VDVNLKPTVNSSQ 197
KAKE VMFIETSAKAG+N+K + + L + + DM +D+ L+
Sbjct: 121 KAKELNVMFIETSAKAGYNVKQVRTRWLKWLLLVHPCGTGDVPDMGLIDIKLEKPQEQPV 180
Query: 198 TEQQGGGCAC 207
+E GGC+C
Sbjct: 181 SE---GGCSC 187
>gi|320586660|gb|EFW99330.1| Ras small monomeric GTPase [Grosmannia clavigera kw1407]
Length = 174
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 141/180 (78%), Gaps = 8/180 (4%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D++N +SF NT +WI++VR ERG DVIIVLVGNKTDL DKR+V+ ++G+ +AK +MF+
Sbjct: 61 DISNAKSFQNTRKWIDDVRAERGNDVIIVLVGNKTDLNDKREVTTQQGEEEAKRNNLMFV 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ--EDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAK G N+KPLF++IA ALPGME + Q M+DV P S + GCAC
Sbjct: 121 ETSAKVGHNVKPLFKRIAQALPGMEGTDAAAQASSQMIDVKTTPAPPSQE------GCAC 174
>gi|322693940|gb|EFY85784.1| RAS small monomeric GTPase Rab6 [Metarhizium acridum CQMa 102]
Length = 490
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/155 (74%), Positives = 138/155 (89%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
+GKTS+ITRFMYD FD YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 35 IGKTSLITRFMYDSFDNMYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 94
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKTDL +KR+V+ ++G+
Sbjct: 95 RDSSVAVVVYDISNAKSFQNTKKWIDDVRAERGNDVIIVLVGNKTDLNEKREVTTQQGED 154
Query: 140 KAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+AK+ +MF+ETSAK G N+K LF++IA ALPGME
Sbjct: 155 EAKKNNLMFMETSAKLGHNVKNLFKRIAQALPGME 189
>gi|256271753|gb|EEU06790.1| Ypt6p [Saccharomyces cerevisiae JAY291]
Length = 215
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 156/208 (75%), Gaps = 7/208 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG-DVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+IVYD+ R+SF +WIE+V+ ERG +VI+ +VGNK+D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSD 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST--KQE 182
L D+RQ+S EEG+ KAK G +F+ETS K G+N+K LF+KIA +LP + ST E
Sbjct: 128 LSDERQISTEEGEKKAKLLGAKIFMETSTKEGYNVKALFKKIAKSLPEFQNSESTPLDSE 187
Query: 183 DMVDVNL-KPTV--NSSQTEQQGGGCAC 207
+ N KP V S+ EQ+ C C
Sbjct: 188 NANSANQNKPGVIDISTAEEQEQSACQC 215
>gi|50311935|ref|XP_455999.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645135|emb|CAG98707.1| KLLA0F20471p [Kluyveromyces lactis]
Length = 212
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 156/209 (74%), Gaps = 4/209 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQ
Sbjct: 4 AAGKTLRKYKIVFLGEQGVGKTSLITRFMYDTFDDNYQATIGIDFLSKTMYLDDKTIRLQ 63
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLV 120
LWDTAGQERFRSLIPSYIRDS VA++VYDV NR+SF +WIE+V+ ERG +VI+V+V
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSHVAIVVYDVTNRKSFEYIDKWIEDVKMERGEENVILVIV 123
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
GNK+DLV++RQVS EEG+ K+ +FIETS KAGFN+K LF+KIA LP + ST
Sbjct: 124 GNKSDLVEERQVSTEEGERKSTVLNAKLFIETSTKAGFNVKTLFKKIAKLLPEFQDAQST 183
Query: 180 KQEDMVDVNLKPTVN--SSQTEQQGGGCA 206
++ + +N + QQ GC
Sbjct: 184 PLDNDTNDKKPGVINLAAPDESQQSNGCC 212
>gi|426369724|ref|XP_004051834.1| PREDICTED: ras-related protein Rab-6A, partial [Gorilla gorilla
gorilla]
Length = 158
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 133/158 (84%)
Query: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR
Sbjct: 1 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 60
Query: 81 DSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGK 140
DS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+ K
Sbjct: 61 DSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERK 120
Query: 141 AKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
AKE VMFIETSAKAG+N+K A +E L S
Sbjct: 121 AKELNVMFIETSAKAGYNVKQRIGSCHVAQASLELLDS 158
>gi|401624481|gb|EJS42537.1| ypt6p [Saccharomyces arboricola H-6]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 157/209 (75%), Gaps = 8/209 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYD+ R+SF +WIE+V+ ERG +VI+ +VGNK+D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIVVYDITKRKSFEYIDKWIEDVKNERGEENVILCIVGNKSD 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
L D+RQ+S EEG+ KAK G +F+ETS KAG+N+K LF+KIA +LP + ST +
Sbjct: 128 LSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKTLFKKIAKSLPEFQNSDSTPLDGE 187
Query: 185 VDVNL----KPTV--NSSQTEQQGGGCAC 207
N KP V S+ EQ+ GC C
Sbjct: 188 NANNSGNQNKPGVIDISTTDEQEQSGCQC 216
>gi|448526176|ref|XP_003869288.1| Ypt6 protein [Candida orthopsilosis Co 90-125]
gi|380353641|emb|CCG23152.1| Ypt6 protein [Candida orthopsilosis]
Length = 215
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 152/207 (73%), Gaps = 6/207 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY TIGIDFLSKTMYLE+ +TVRLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEEGKTVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SFLN +WI++V+ ERG DV+IVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFLNLDKWIKDVKVERGDDVVIVLVGNKSD 128
Query: 126 LVD-KRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
L + KRQVS+EE + + G FIETS KA N+K LF+KIA +LP + ++
Sbjct: 129 LANTKRQVSVEEVEQLHNKIGSNFFIETSTKANHNVKLLFKKIAQSLPDFNNDEDEENQE 188
Query: 184 MVDVNLKPTVN---SSQTEQQGGGCAC 207
+ N T+N + + QG C
Sbjct: 189 QANTNKPETINITIENDDKNQGTSSCC 215
>gi|365990439|ref|XP_003672049.1| hypothetical protein NDAI_0I02380 [Naumovozyma dairenensis CBS 421]
gi|343770823|emb|CCD26806.1| hypothetical protein NDAI_0I02380 [Naumovozyma dairenensis CBS 421]
Length = 222
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 157/215 (73%), Gaps = 14/215 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD-VIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYD+ ++SF +WI +V+ ERG D VI+ +VGNK D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIVVYDITKKESFDFIDKWINDVKNERGEDNVILCIVGNKND 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLS------- 177
L D+RQVSIEEG+ KAK+ G +F+ETS KAG+N+K LF++IA +LP + +
Sbjct: 128 LTDQRQVSIEEGENKAKQLGANIFMETSTKAGYNVKTLFKRIAKSLPEFQNSTSDPLSGD 187
Query: 178 STKQEDMVDVNL---KPTVNSSQTE--QQGGGCAC 207
S D D N+ K + TE QQ GC C
Sbjct: 188 SKTTSDKNDANVGNDKAGIIDISTEEGQQQSGCQC 222
>gi|367017001|ref|XP_003682999.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
gi|359750662|emb|CCE93788.1| hypothetical protein TDEL_0G04210 [Torulaspora delbrueckii]
Length = 222
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 162/222 (72%), Gaps = 15/222 (6%)
Query: 1 MASVSP---LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT 57
M+ P L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T
Sbjct: 1 MSGTRPGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKT 60
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVI 116
+RLQLWDTAGQERFRSLIPSYIRDS VA++VYD+ ++SF +WIE+V+ ERG +VI
Sbjct: 61 IRLQLWDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEFIDKWIEDVKNERGEENVI 120
Query: 117 IVLVGNKTDLVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGM-- 173
+ +VGNK+DL D+RQVS EEG+ KAK G +F+ETS KAG N+K LF+KIA +LP
Sbjct: 121 LCIVGNKSDLADERQVSTEEGEAKAKLLGAKIFMETSTKAGHNVKNLFKKIAKSLPEFQE 180
Query: 174 -ETLSSTKQEDMVDVNLKPT-------VNSSQTEQQGGGCAC 207
+ + + ++ +V K + +++ + QGGGC C
Sbjct: 181 GQHAGALEGDNSNEVGKKEANGSGVIDITTTEDQAQGGGCQC 222
>gi|444320471|ref|XP_004180892.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
gi|387513935|emb|CCH61373.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
Length = 207
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 154/207 (74%), Gaps = 3/207 (1%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQL
Sbjct: 2 SNKTLTKYKIVFLGEQGVGKTSLITRFMYDTFDEHYQATIGIDFLSKTMYLDDKTIRLQL 61
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD-VIIVLVG 121
WDTAGQERFRSLIPSYIRDS VA++VYD+ ++SF +WI++V+ ERG D VI+ +VG
Sbjct: 62 WDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIQDVKNERGDDGVILCIVG 121
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
NK+DL D+RQVS EEG+ KAK G +F+ETS KAG+N+K LF+KIA +LP E
Sbjct: 122 NKSDLSDQRQVSNEEGENKAKLLGADIFMETSTKAGYNVKNLFKKIAKSLPEFENTEGNP 181
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
E+ + + ++ +Q GC C
Sbjct: 182 LENEERAGV-IDIGENEEPKQEAGCQC 207
>gi|354470906|ref|XP_003497685.1| PREDICTED: ras-related protein Rab-6B-like, partial [Cricetulus
griseus]
Length = 165
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/168 (69%), Positives = 138/168 (82%), Gaps = 3/168 (1%)
Query: 40 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLN 99
ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF
Sbjct: 1 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQ 60
Query: 100 TSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNI 159
TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+
Sbjct: 61 TSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNV 120
Query: 160 KPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
K LFR++A+ALPGME + +E M+D+ L +E GGC+C
Sbjct: 121 KQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASE---GGCSC 165
>gi|365759371|gb|EHN01162.1| Ypt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842296|gb|EJT44532.1| YPT6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 216
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 155/210 (73%), Gaps = 10/210 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA+IVYD+ R+SF +WIE+V+ ERG +VI+ +VGNK+D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGEENVILCIVGNKSD 127
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
L D+RQ+S EEG+ KAK G +F+ETS KAG+N+K LF++IA +LP + ST D
Sbjct: 128 LSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKTLFKRIAKSLPEFQNSESTPL-DG 186
Query: 185 VDVNLKPTVN-------SSQTEQQGGGCAC 207
+ N N S+ EQ+ C C
Sbjct: 187 ENANTSGNQNKPGVIDISTTEEQEQTSCQC 216
>gi|326914674|ref|XP_003203649.1| PREDICTED: ras-related protein Rab-6A-like, partial [Meleagris
gallopavo]
Length = 271
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/141 (82%), Positives = 129/141 (91%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI
Sbjct: 50 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 109
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKTDL DKRQVSIEEG+
Sbjct: 110 RDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 169
Query: 140 KAKEFGVMFIETSAKAGFNIK 160
KAKE VMFIETSAKAG+N+K
Sbjct: 170 KAKELNVMFIETSAKAGYNVK 190
>gi|390479890|ref|XP_002763014.2| PREDICTED: ras-related protein Rab-41 [Callithrix jacchus]
Length = 224
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/187 (64%), Positives = 145/187 (77%), Gaps = 2/187 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SP K KLVFLGD S+GKTSIITRFMYD F T+QAT+GIDFLSK MYLEDR V+LQLWD
Sbjct: 28 SP-CKAKLVFLGDPSLGKTSIITRFMYDSFGCTFQATVGIDFLSKNMYLEDRIVQLQLWD 86
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SLIPSYIR S++AV+VYDV N SF T +W+E VR ERG DV+I+LVGNK
Sbjct: 87 TAGQERFHSLIPSYIRGSTIAVVVYDVTNINSFKETDKWVERVRAERGDDVVIMLVGNKI 146
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL ++RQV+ EEG+ K++ VMFIETSAK +N+ LFR +A+ALP T S +E
Sbjct: 147 DLNNERQVTAEEGEEKSRNLNVMFIETSAKTSYNVDKLFRCVASALPSTST-SPPPKEGT 205
Query: 185 VDVNLKP 191
V++ L+P
Sbjct: 206 VEIQLEP 212
>gi|340376610|ref|XP_003386825.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P+ K+K+VFLG+++VGKTSIITRFMYD FD+ YQATIGIDFL+KTMYL+DRTVRLQLWD
Sbjct: 5 NPMRKFKIVFLGEEAVGKTSIITRFMYDTFDSNYQATIGIDFLAKTMYLDDRTVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF++L+P+YIRDS++A++VYD+ N SF +WIE+VR ERG DV+IVL GNK
Sbjct: 65 TAGQERFKALVPAYIRDSAIAIVVYDITNSASFDAVDQWIEDVRAERGDDVVIVLTGNKL 124
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL D R +S E+G+ KAKE V+F+ETSAK+G NIK LF++ ALP M
Sbjct: 125 DLED-RVISTEKGESKAKELNVIFVETSAKSGANIKQLFKRAVLALPSM 172
>gi|410075027|ref|XP_003955096.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS 2517]
gi|372461678|emb|CCF55961.1| hypothetical protein KAFR_0A05260 [Kazachstania africana CBS 2517]
Length = 235
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 151/199 (75%), Gaps = 4/199 (2%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
L+KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 19 SLSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 78
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLVGNKT 124
AGQERFRSLIPSYIRDS VA++VYD+ ++SF +W+++V+ ERG +V++ +VGNK
Sbjct: 79 AGQERFRSLIPSYIRDSKVAIVVYDITKKKSFEFIDKWVDDVKNERGEENVVLCIVGNKN 138
Query: 125 DLVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
DL D+RQVS EEG+ KAK+ G +F+ETS KAG+N+K LF++IA +LP E S E
Sbjct: 139 DLGDERQVSTEEGEAKAKKLGAKIFMETSTKAGYNVKNLFKRIAKSLP--EFQSENTDES 196
Query: 184 MVDVNLKPTVNSSQTEQQG 202
+D L + + G
Sbjct: 197 SLDNKLSSNTGGNNSSSNG 215
>gi|354545927|emb|CCE42656.1| hypothetical protein CPAR2_202990 [Candida parapsilosis]
Length = 215
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 151/207 (72%), Gaps = 6/207 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY TIGIDFLSKTMYLE+ +TVRLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEEGKTVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SFLN +WI++V+ ERG DV+IVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFLNLDKWIKDVKVERGDDVVIVLVGNKSD 128
Query: 126 LVD-KRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
L KRQVS+EE + + G FIETS KA N+K LF+KIA +LP + + +
Sbjct: 129 LASTKRQVSVEEVEQLHNKIGSKFFIETSTKANHNVKLLFKKIAQSLPDFNNDENDENRE 188
Query: 184 MVDVNLKPTVN---SSQTEQQGGGCAC 207
+ + T+N + + QG C
Sbjct: 189 PANADKPETINITIENDDKNQGTSSCC 215
>gi|255721801|ref|XP_002545835.1| GTP-binding protein ryh1 [Candida tropicalis MYA-3404]
gi|240136324|gb|EER35877.1| GTP-binding protein ryh1 [Candida tropicalis MYA-3404]
Length = 215
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 153/209 (73%), Gaps = 10/209 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SF N +WI++V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
L DKRQVS+E+ + + G FIETS KA N+K LF+KIA +LP E ED
Sbjct: 129 LATDKRQVSLEDVEILQNKIGARFFIETSTKANHNVKLLFKKIAQSLP--EFNQDENSED 186
Query: 184 MVDVNLKP-----TVNSSQTEQQGGGCAC 207
+ N P +++++ QG C
Sbjct: 187 ANNKNNHPETVDISIDNNTDTNQGSSTCC 215
>gi|150866330|ref|XP_001385886.2| hypothetical protein PICST_61694 [Scheffersomyces stipitis CBS
6054]
gi|149387586|gb|ABN67857.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 224
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 141/172 (81%), Gaps = 3/172 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYL+D RT+RLQLWDT
Sbjct: 19 LRKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLDDNRTIRLQLWDT 78
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SF N +WI++V+ ERG DVIIVLVGNK+D
Sbjct: 79 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFNNLDKWIKDVKLERGDDVIIVLVGNKSD 138
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMET 175
L DKRQV++E+ + ++ G FIETS KA N+K LF+KIA +LP T
Sbjct: 139 LANDKRQVTLEDVEALHRKVGSKFFIETSTKANHNVKLLFKKIAQSLPEFNT 190
>gi|326477305|gb|EGE01315.1| rab6 [Trichophyton equinum CBS 127.97]
Length = 203
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 152/203 (74%), Gaps = 11/203 (5%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+IT FMYD TT + FLS EDRTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSVGKTSLITGFMYDS-STTRTSNYRNGFLS-----EDRTVRLQLWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYI++S+VAV+VYD++N +SF NT +W+++VR ERG DVII LVGNKT
Sbjct: 66 TAGQERFRSLIPSYIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKT 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKR+V+ E+G+ +AK+ G+MFIETSAK G N+K LF+KIA ALPGME + M
Sbjct: 126 DLNDKREVTTEQGEEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGMEGETPNSDNQM 185
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+DV++ PT S CAC
Sbjct: 186 IDVSINPTKPVSN-----DACAC 203
>gi|320580277|gb|EFW94500.1| GTPase, Ras-like GTP binding protein [Ogataea parapolymorpha DL-1]
Length = 200
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 154/207 (74%), Gaps = 14/207 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLGDQ VGKTS+ITRFMYD FD Y ATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 2 LTKYKIVFLGDQGVGKTSLITRFMYDTFDAHYAATIGIDFLSKTMYLDDKTIRLQLWDTA 61
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS+VA+IVYD+ N++SF N S+W + V+ ERG +V+I+LVGNK+DL
Sbjct: 62 GQERFRSLIPSYIRDSNVAIIVYDITNKESFQNVSKWFDYVKQERGSNVLIILVGNKSDL 121
Query: 127 VDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED-- 183
+ + + EEG+ K+ G FIETS+K G+N+K LF+K+A LP ++ ++ + D
Sbjct: 122 -ENKIIPNEEGESMCKKLGCNFFIETSSKNGYNVKNLFKKVAKLLPELQDENTDQALDND 180
Query: 184 ---MVDVNLKPTVNSSQTEQQGGGCAC 207
M+DV ++ ++ GC C
Sbjct: 181 KVQMIDV-------AANNQEAADGCQC 200
>gi|10120632|pdb|1D5C|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab6 Complexed
With Gdp
Length = 162
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/162 (70%), Positives = 136/162 (83%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYKLVFLG+Q+VGKTSIITRF YD FD YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQ
Sbjct: 1 KYKLVFLGEQAVGKTSIITRFXYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG DVII LVGNKTDL D
Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 120
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
R+V+ EEG KA+E+ F ETSAKAG NIK LF+K A+ L
Sbjct: 121 LRKVTYEEGXQKAQEYNTXFHETSAKAGHNIKVLFKKTASKL 162
>gi|307777798|dbj|BAJ21295.1| Rab-family small GTPase Rab6A [Tetrahymena thermophila]
Length = 229
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 142/195 (72%), Gaps = 4/195 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL+KYKLVFLGDQ VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+ YD+ N+ SF N ++WIE+VR ERG DVII LVG+K
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHDVIICLVGSKN 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DLVDKR V +G KAKE V F E SA G N++ LFR IA LPG E Q
Sbjct: 131 DLVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANMLPGAE----VSQLAQ 186
Query: 185 VDVNLKPTVNSSQTE 199
+ + VN++Q E
Sbjct: 187 LQGGMNKNVNNNQEE 201
>gi|340386562|ref|XP_003391777.1| PREDICTED: ras-related protein Rab-6.2-like [Amphimedon
queenslandica]
Length = 205
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 141/169 (83%), Gaps = 1/169 (0%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P+ K+K+VFLG+++VGKTSIITRFMYD FD+ YQATIGIDFL+KTMYL+DR VRLQLWD
Sbjct: 5 NPMRKFKIVFLGEEAVGKTSIITRFMYDTFDSNYQATIGIDFLAKTMYLDDRMVRLQLWD 64
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF++L+P+YIRDS++A++VYD+ N SF +WIE+VR ERG DV+IVL GNK
Sbjct: 65 TAGQERFKALVPAYIRDSAIAIVVYDITNSASFDAVDQWIEDVRAERGDDVVIVLTGNKL 124
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL D R +S E+G+ KAKE V+F+ETSAK+G NIK LF++ ALP M
Sbjct: 125 DLED-RVISTEKGESKAKELNVIFVETSAKSGANIKQLFKRAVLALPSM 172
>gi|145501222|ref|XP_001436593.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403734|emb|CAK69196.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 137/172 (79%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V+PL+KYKLVFLGDQSVGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLW
Sbjct: 9 VAPLSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLW 68
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDS+VAV+ YDV + SF + +RWI +VR ERG DVII +V NK
Sbjct: 69 DTAGQERFRSLIPSYIRDSAVAVVCYDVEVKTSFASITRWISDVRLERGNDVIIFIVANK 128
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
D++++R +S EEG AKE FIE SAK G N++ LF++IAA LPG ET
Sbjct: 129 IDVLNERVISTEEGANLAKECDAHFIEVSAKTGNNVELLFKQIAATLPGTET 180
>gi|50292103|ref|XP_448484.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527796|emb|CAG61445.1| unnamed protein product [Candida glabrata]
Length = 219
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 156/211 (73%), Gaps = 10/211 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTA
Sbjct: 9 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDNYQATIGIDFLSKTMYLDDKTIRLQLWDTA 68
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG-DVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYD+ R+SF +WIE+V+ ERG +VI+ +VGNK+D
Sbjct: 69 GQERFRSLIPSYIRDSRVAIVVYDITKRKSFEFIDKWIEDVKNERGAENVILCVVGNKSD 128
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
L D+RQV+ EEG+ KA++ G +F++TS K G+N+K LF+KIA +LP + + E+
Sbjct: 129 LADERQVTAEEGEKKAQDLGAKIFMQTSTKVGYNVKNLFKKIAKSLPEFQDSDANPLENT 188
Query: 185 ------VDVNLKPTVNSSQT--EQQGGGCAC 207
+ N ++ S T +Q GC C
Sbjct: 189 GGAAGNRNSNKAGVIDISTTDEDQSQSGCQC 219
>gi|229462781|sp|Q5JT25.2|RAB41_HUMAN RecName: Full=Ras-related protein Rab-41
gi|119625752|gb|EAX05347.1| RAB41, member RAS homolog family [Homo sapiens]
Length = 222
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+QSVGKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 88
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+L+GNK DL
Sbjct: 89 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDL 148
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ E+G+ K++ VMFIETSAK G+N+K LFR++A+AL T S +E V+
Sbjct: 149 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTVE 207
Query: 187 VNLK 190
+ L+
Sbjct: 208 IELE 211
>gi|340504136|gb|EGR30614.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 230
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/170 (67%), Positives = 135/170 (79%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL KYKLVFLGDQ+VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLQKYKLVFLGDQAVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+ YDV NRQSF N ++WIE+VR ER +VII LVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVVCYDVTNRQSFDNVTKWIEDVRNERRQEVIICLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
D+ DKRQ+ +G K+KE V + E SA +G NI LF++IA LPG E
Sbjct: 131 DMQDKRQIQYADGLQKSKELDVKYFEVSALSGENIPQLFKEIACMLPGAE 180
>gi|355704896|gb|EHH30821.1| Ras-related protein Rab-41, partial [Macaca mulatta]
gi|355757440|gb|EHH60965.1| Ras-related protein Rab-41, partial [Macaca fascicularis]
Length = 222
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/184 (63%), Positives = 144/184 (78%), Gaps = 1/184 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+ SVGKTS+ITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEPSVGKTSVITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 88
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+LVGNK DL
Sbjct: 89 GQERFHSLIPSYIRDSTIAVVVYDITNISSFKETDKWVEHVRAERGDDVVIMLVGNKIDL 148
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ EEG+ K++ VMFIETSAK G+N+K LFR++ +AL TL K E V+
Sbjct: 149 DNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVVSALLSTRTLPPPK-EGTVE 207
Query: 187 VNLK 190
+ L+
Sbjct: 208 IELE 211
>gi|403216033|emb|CCK70531.1| hypothetical protein KNAG_0E02720 [Kazachstania naganishii CBS
8797]
Length = 231
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 150/203 (73%), Gaps = 14/203 (6%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S L+KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKTMYL+D T+R QL
Sbjct: 10 SGKALSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDHTIRFQL 69
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD-VIIVLVG 121
WDTAGQERFRSLIPSYIRDS VA++VYD+ ++SF +W+E+V+ ER D VI +VG
Sbjct: 70 WDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWVEDVKNERSADNVIFCIVG 129
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
NK+DL D+RQVS EEG+ K K G +F+ETS KAG+N+K LF+KIA +LP +
Sbjct: 130 NKSDLTDERQVSTEEGEQKTKVLGAQIFMETSTKAGYNVKNLFKKIAKSLPEFQD----- 184
Query: 181 QEDMVDVNLKPTVNSSQTEQQGG 203
D N T++S+ QQGG
Sbjct: 185 ----TDTN---TLDSNSGNQQGG 200
>gi|118383836|ref|XP_001025072.1| Ras family protein [Tetrahymena thermophila]
gi|89306839|gb|EAS04827.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 277
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 133/170 (78%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL+KYKLVFLGDQ VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+ YD+ N+ SF N ++WIE+VR ERG DVII LVG+K
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHDVIICLVGSKN 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DLVDKR V +G KAKE V F E SA G N++ LFR IA LPG E
Sbjct: 131 DLVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANMLPGAE 180
>gi|403305127|ref|XP_003943122.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41 [Saimiri
boliviensis boliviensis]
Length = 225
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KLVFLG+QSVGKTSIITRF YD F T+QAT+G+DFLSKTM LEDR V+LQLWDTA
Sbjct: 30 LCKAKLVFLGEQSVGKTSIITRFTYDSFGCTFQATVGVDFLSKTMCLEDRIVQLQLWDTA 89
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIR S++AV+VYD + SF T +W+E VR ERG DV+I+LVGNK DL
Sbjct: 90 GQERFHSLIPSYIRGSTIAVVVYDPGDISSFKETDKWVEHVRAERGDDVVIMLVGNKIDL 149
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ EEG+ K++ VMFIETSAK +N+ LFR +A+ LP T S +E ++
Sbjct: 150 NNKRQVTAEEGEEKSRNLNVMFIETSAKTSYNVDKLFRHVASVLPSTST-SHPPKEGPIE 208
Query: 187 VNLKP 191
+ L+P
Sbjct: 209 IQLEP 213
>gi|399219055|emb|CCF75942.1| unnamed protein product [Babesia microti strain RI]
Length = 220
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 147/186 (79%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYK+V LG+QS GKTSI+TRFMYD F++TYQATIGIDFLSKT+ ++ +RLQLWDTA
Sbjct: 15 IKKYKIVLLGEQSSGKTSIVTRFMYDTFESTYQATIGIDFLSKTITVKKTQLRLQLWDTA 74
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSL+PSYIRDSS AVI YD+ NR+SF NT++WI++VR ER + I++LVGNKTDL
Sbjct: 75 GQERFRSLMPSYIRDSSAAVITYDITNRKSFENTTKWIDDVRRERANNAILILVGNKTDL 134
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
VDKRQVS EEG+ AK++G++F ETSAK G NI +F +A +L S T E +VD
Sbjct: 135 VDKRQVSYEEGEEHAKKYGMIFQETSAKEGTNISKIFFDVAESLLDFNAGSVTIPEKLVD 194
Query: 187 VNLKPT 192
++L +
Sbjct: 195 IDLHSS 200
>gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|374110173|gb|AEY99078.1| FAGR257Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 142/167 (85%), Gaps = 2/167 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L+KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKT+YL+DRT+RLQLWDTA
Sbjct: 10 LSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTVYLDDRTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYD+ N++SF +W+E+VR ERG ++I+ +VGNK+D
Sbjct: 70 GQERFRSLIPSYIRDSHVAIVVYDITNKKSFEYIDKWVEDVRNERGEENLILCIVGNKSD 129
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALP 171
LVD+R+V++EEG+ KAK +F+ETS KAGFN+ LF++IA LP
Sbjct: 130 LVDERKVTVEEGENKAKLLNAKIFVETSTKAGFNVGALFKRIAKLLP 176
>gi|149239262|ref|XP_001525507.1| GTP-binding protein ryh1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451000|gb|EDK45256.1| GTP-binding protein ryh1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 220
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 149/212 (70%), Gaps = 11/212 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY TIGIDFLSKTMYLED +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYATTIGIDFLSKTMYLEDGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SF N ++WI++V+ ERG DVI+VLVGNK D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFTNLNKWIKDVKLERGDDVIMVLVGNKLD 128
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
L DKRQVS+E+ + + G FIETS KA N+K LF+KIA +LP + +
Sbjct: 129 LANDKRQVSLEDVEQLHNKTGSKFFIETSTKANHNVKLLFKKIAQSLPDFNNEDEDGEGE 188
Query: 184 MVDVNLKPTVNSSQT--------EQQGGGCAC 207
T N S+T QQG C
Sbjct: 189 GAGGEGDGTNNKSETIDISIENNPQQGTSTCC 220
>gi|145534476|ref|XP_001452982.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834215|emb|CAI44484.1| rab_A75 [Paramecium tetraurelia]
gi|124420682|emb|CAK85585.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V+PL+KYKLVFLGDQSVGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLW
Sbjct: 9 VAPLSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLW 68
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDS+VAV+ YDV +QSF + ++WIE+VR ERG DVII LV NK
Sbjct: 69 DTAGQERFRSLIPSYIRDSAVAVVCYDVEVKQSFDSVAKWIEDVRLERGNDVIIFLVANK 128
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
DL + R VS E+G AKE FIE SAK+G N++ LF++IAA LPG ET
Sbjct: 129 IDL-ENRVVSTEQGAALAKEQDAHFIEVSAKSGSNVELLFKQIAATLPGTET 179
>gi|152013703|gb|ABS19967.1| ras small monomeric GTPase Rab6 protein [Artemia franciscana]
Length = 150
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/142 (80%), Positives = 127/142 (89%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVF G+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 9 NPLRKFKLVFPGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TSRWI++VRTERG DVII+LVGNKT
Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSRWIDDVRTERGNDVIIMLVGNKT 128
Query: 125 DLVDKRQVSIEEGDGKAKEFGV 146
DL DKRQVS EEG+ +A+E V
Sbjct: 129 DLSDKRQVSTEEGERRARELNV 150
>gi|344231005|gb|EGV62890.1| hypothetical protein CANTEDRAFT_115849 [Candida tenuis ATCC 10573]
Length = 209
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 139/168 (82%), Gaps = 3/168 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQ VGKTS+ITRFMYD FD Y ATIGIDFLSKTMYLED +T+RLQLWDT
Sbjct: 10 LRKYKIVFLGDQGVGKTSLITRFMYDTFDEQYAATIGIDFLSKTMYLEDNKTIRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS+VA+I YD+ N++SF N +WI EV+ ERG DVIIV+VGNK+D
Sbjct: 70 AGQERFRSLIPSYIRDSNVAIICYDITNKKSFDNLDKWISEVKLERGEDVIIVIVGNKSD 129
Query: 126 LVDKRQVSIEEGD--GKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
L +KRQVS EE + GK+ E +++ETS KA NIK LF+KIA +LP
Sbjct: 130 LNNKRQVSAEELETLGKSIENCSIYLETSTKANHNIKLLFKKIAKSLP 177
>gi|397498900|ref|XP_003820211.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41 [Pan
paniscus]
Length = 222
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 145/184 (78%), Gaps = 1/184 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+QSVGKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 88
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E V ERG DV+I+L+GNK DL
Sbjct: 89 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVXAERGDDVVIMLLGNKIDL 148
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ E+G+ K++ VMFIETSAK G+N+K LFR++A+AL T S +E V+
Sbjct: 149 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTVE 207
Query: 187 VNLK 190
+ L+
Sbjct: 208 IELE 211
>gi|68485957|ref|XP_713097.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46434574|gb|EAK93979.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 224
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/220 (57%), Positives = 155/220 (70%), Gaps = 23/220 (10%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SF N +WI++V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK--- 180
L DKRQVS+++ + + G FIETS KA N+K LF+KIA +LP S+ K
Sbjct: 129 LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPDFNQDSNDKSND 188
Query: 181 -------------QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
Q + +D+ T++++ QG C
Sbjct: 189 NNNNNNNNNNNNNQSETIDI----TIDNTAPNPQGTSTCC 224
>gi|344231004|gb|EGV62889.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 260
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 143/179 (79%), Gaps = 3/179 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQ VGKTS+ITRFMYD FD Y ATIGIDFLSKTMYLED +T+RLQLWDT
Sbjct: 61 LRKYKIVFLGDQGVGKTSLITRFMYDTFDEQYAATIGIDFLSKTMYLEDNKTIRLQLWDT 120
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS+VA+I YD+ N++SF N +WI EV+ ERG DVIIV+VGNK+D
Sbjct: 121 AGQERFRSLIPSYIRDSNVAIICYDITNKKSFDNLDKWISEVKLERGEDVIIVIVGNKSD 180
Query: 126 LVDKRQVSIEEGD--GKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
L +KRQVS EE + GK+ E +++ETS KA NIK LF+KIA +LP + S + +
Sbjct: 181 LNNKRQVSAEELETLGKSIENCSIYLETSTKANHNIKLLFKKIAKSLPEFNSDSGAQNK 239
>gi|449666816|ref|XP_002162274.2| PREDICTED: ras-related protein Rab-6A-like [Hydra magnipapillata]
Length = 174
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 139/178 (78%), Gaps = 4/178 (2%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD+TYQATIGIDFLSKTMYLEDRTVRLQ+WDTAGQERFRSLIPSYIRDSS A++VY
Sbjct: 1 MYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQIWDTAGQERFRSLIPSYIRDSSAAIVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ N SF +WIE+VR ERG DV+I+LVGNKTDL DKR++S+E+G+ KAKE GV+FI
Sbjct: 61 DITNTNSFAQVDKWIEDVRAERGDDVVIMLVGNKTDLTDKRRISMEQGEKKAKELGVIFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
E+SAK N+K LFR+I+A+LPG++ K +++ D + P V + + C C
Sbjct: 121 ESSAKTAHNVKQLFRRISASLPGIDDKEDDKPKEL-DSVIHPLV---EKQNDSSYCTC 174
>gi|303313355|ref|XP_003066689.1| Ras-related protein Rab-6A , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106351|gb|EER24544.1| Ras-related protein Rab-6A , putative [Coccidioides posadasii C735
delta SOWgp]
Length = 180
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 130/145 (89%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D++N +SF NT +W+++VR ERG DVIIVLVGNKTDL DKR+V+ +G+ +AK+ G+MFI
Sbjct: 61 DISNAKSFQNTRKWVDDVRGERGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGME 174
ETSAK G+N+K LFR+IA ALPGME
Sbjct: 121 ETSAKVGYNVKQLFRRIAQALPGME 145
>gi|378732802|gb|EHY59261.1| Ras-like protein Rab-6B [Exophiala dermatitidis NIH/UT8656]
Length = 174
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/180 (66%), Positives = 144/180 (80%), Gaps = 8/180 (4%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VY
Sbjct: 1 MYDSFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD-KRQVSIEEGDGKAKEFGVMF 148
D+++R++F T +WI++VR ERG DVI+VLVGNKTDL D KR+V+ ++G+ +AK G +F
Sbjct: 61 DISSRKTFEQTRKWIDDVRGERGNDVIVVLVGNKTDLGDSKREVTTQQGEEEAKRAGAIF 120
Query: 149 IETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ETSAK G N+K LFR+IA ALPGME+ S M+DV++ N E+ GCAC
Sbjct: 121 METSAKLGHNVKALFRRIAQALPGMESEGESQPNPQMIDVSIN---NQKPAEE---GCAC 174
>gi|241958896|ref|XP_002422167.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223645512|emb|CAX40171.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 219
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 142/177 (80%), Gaps = 3/177 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SF N +WI++V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
L DKRQVS+++ + + G FIETS KA N+K LF+KIA +LP S+ K
Sbjct: 129 LASDKRQVSLDDVEQLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPDFNQESNDK 185
>gi|68486004|ref|XP_713074.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46434549|gb|EAK93955.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 219
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 154/215 (71%), Gaps = 18/215 (8%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SF N +WI++V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGME--------- 174
L DKRQVS+++ + + G FIETS KA N+K LF+KIA +LP
Sbjct: 129 LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPDFNQDSNDKSND 188
Query: 175 --TLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
++ Q + +D+ T++++ QG C
Sbjct: 189 NNNNNNNNQSETIDI----TIDNTAPNPQGTSTCC 219
>gi|313215908|emb|CBY37318.1| unnamed protein product [Oikopleura dioica]
Length = 478
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/137 (83%), Positives = 126/137 (91%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 8 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYDV N SF T++WI++VRTERG DVIIVLVGNKT
Sbjct: 68 TAGQERFRSLIPSYIRDSTVAVVVYDVTNINSFNQTNKWIDDVRTERGTDVIIVLVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKA 141
DL DKRQVSI+EG+ KA
Sbjct: 128 DLADKRQVSIDEGERKA 144
>gi|426396293|ref|XP_004064382.1| PREDICTED: ras-related protein Rab-41 [Gorilla gorilla gorilla]
Length = 221
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 145/184 (78%), Gaps = 2/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+QS GKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEQS-GKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 87
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+L+GNK DL
Sbjct: 88 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDL 147
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ EEG+ K++ VMFIETSAK G+N+K LFR++A+AL T S +E V+
Sbjct: 148 DNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTVE 206
Query: 187 VNLK 190
+ L+
Sbjct: 207 IELE 210
>gi|145529337|ref|XP_001450457.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831341|emb|CAI39286.1| rab_B75 [Paramecium tetraurelia]
gi|124418068|emb|CAK83060.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 149/210 (70%), Gaps = 10/210 (4%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
V+PL+KYKLVFLGDQSVGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLW
Sbjct: 9 VAPLSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLW 68
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQERFRSLIPSYIRDS+VAV+ YDV +QSF + +WIE+VR ERG DVII LV NK
Sbjct: 69 DTAGQERFRSLIPSYIRDSAVAVVCYDVEVKQSFESVVKWIEDVRLERGNDVIIFLVANK 128
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
DL + R +S E+G AKE FIE SAK G N++ LF++IAA LPG ET S
Sbjct: 129 IDL-ENRVISTEQGATLAKEQDAHFIEVSAKLGSNVELLFKQIAATLPGTET--SQMVNS 185
Query: 184 MVDVNLKPT-------VNSSQTEQQGGGCA 206
+V+ +P N +Q ++ G C
Sbjct: 186 VVNHPTQPNNIILDDPQNQNQEKKDGKSCC 215
>gi|238880071|gb|EEQ43709.1| GTP-binding protein ryh1 [Candida albicans WO-1]
Length = 218
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 139/168 (82%), Gaps = 3/168 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 9 LKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SF N +WI++V+ ERG DVIIVLVGNK+D
Sbjct: 69 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLVGNKSD 128
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALP 171
L DKRQVS+++ + + G FIETS KA N+K LF+KIA +LP
Sbjct: 129 LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLP 176
>gi|363750482|ref|XP_003645458.1| hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889092|gb|AET38641.1| Hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
Length = 221
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 152/212 (71%), Gaps = 11/212 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L+KYK+VFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKT+YL+DR +RLQLWDTA
Sbjct: 10 LSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTVYLDDRNIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG-GDVIIVLVGNKTD 125
GQERFRSLIPSYIRDS VA++VYDV N++SF +W+E+V+TERG ++I+ +VGNK D
Sbjct: 70 GQERFRSLIPSYIRDSHVAIVVYDVTNKRSFEYIDKWVEDVKTERGEENLILCIVGNKND 129
Query: 126 LVDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAALPGMETLSST----- 179
LVD+R VS +EG+ KA+ +F+ETS KAGFN+K LF+ IA LP + +
Sbjct: 130 LVDERSVSTKEGEMKAQLLNAKIFMETSTKAGFNVKQLFKSIAKLLPEFQNTKVSSGVLD 189
Query: 180 -KQEDMVDVNLKPTVNSSQTEQQGGG---CAC 207
+ E + KP V T GG C C
Sbjct: 190 GESEKHNNGGDKPGVIDISTPATGGNESSCQC 221
>gi|297716924|ref|XP_002834740.1| PREDICTED: ras-related protein Rab-41 [Pongo abelii]
Length = 221
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 144/184 (78%), Gaps = 2/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L + KL+FLG+QS GKTSIITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCESKLLFLGEQS-GKTSIITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 87
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+LVGNK DL
Sbjct: 88 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLVGNKIDL 147
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ EEG+ K++ VMFIETSAK G+N+K LFR++A+A T S +E V+
Sbjct: 148 DNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASAFLSTRT-SPPPKEGTVE 206
Query: 187 VNLK 190
+ L+
Sbjct: 207 IELE 210
>gi|332247166|ref|XP_003272726.1| PREDICTED: ras-related protein Rab-41 [Nomascus leucogenys]
Length = 221
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 145/184 (78%), Gaps = 2/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+QS GKTS+ITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LWKSKLLFLGEQS-GKTSVITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 87
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+LVGNK DL
Sbjct: 88 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLVGNKIDL 147
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ EEG+ K++ VMFIETSAK G+N+K LF+++A+AL T S +E V+
Sbjct: 148 DNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFQRVASALLSTRT-SPPPKEGTVE 206
Query: 187 VNLK 190
+ L+
Sbjct: 207 IELE 210
>gi|296011025|ref|NP_001027898.2| ras-related protein Rab-41 [Homo sapiens]
gi|109658998|gb|AAI17240.1| RAB41, member RAS oncogene family [Homo sapiens]
gi|313882768|gb|ADR82870.1| Unknown protein [synthetic construct]
Length = 221
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 145/184 (78%), Gaps = 2/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+QS GKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEQS-GKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 87
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+L+GNK DL
Sbjct: 88 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDL 147
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ E+G+ K++ VMFIETSAK G+N+K LFR++A+AL T S +E V+
Sbjct: 148 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTVE 206
Query: 187 VNLK 190
+ L+
Sbjct: 207 IELE 210
>gi|402910441|ref|XP_003917886.1| PREDICTED: ras-related protein Rab-41 [Papio anubis]
Length = 223
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 142/184 (77%), Gaps = 2/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+ S GKTS+ITRFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEPS-GKTSVITRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 87
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+LVGNK DL
Sbjct: 88 GQERFHSLIPSYIRDSTIAVVVYDITNISSFKETDKWVEHVRAERGDDVVIMLVGNKIDL 147
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ EEG+ K++ VMFIETSAK G+N+K LFR + +AL TL K E V+
Sbjct: 148 DNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRHVVSALLSTRTLPPPK-EGTVE 206
Query: 187 VNLK 190
+ L+
Sbjct: 207 IELE 210
>gi|254572922|ref|XP_002493570.1| GTPase, Ras-like GTP binding protein involved in the secretory
pathway [Komagataella pastoris GS115]
gi|238033369|emb|CAY71391.1| GTPase, Ras-like GTP binding protein involved in the secretory
pathway [Komagataella pastoris GS115]
Length = 203
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 146/208 (70%), Gaps = 14/208 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLGDQ VGKTS+ITRFMYD F+ Y AT+GIDFLSKT+YL+D+TVRLQLWDTA
Sbjct: 3 LTKYKIVFLGDQGVGKTSLITRFMYDTFNDHYAATVGIDFLSKTLYLDDKTVRLQLWDTA 62
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSL+PSYIRDS+VA+IVYD ++ SF + +W ++VR ERG +VII LV NK DL
Sbjct: 63 GQERFRSLVPSYIRDSNVAIIVYDTTSKSSFQSVDKWCDDVRNERGENVIICLVANKADL 122
Query: 127 VDKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAAL------PGMETLSST 179
D+R +S E+G+ KA V +FIETS K G+N+K LFRK+A L PG +
Sbjct: 123 ADQRVISTEDGEKKATGLKVDLFIETSTKKGYNVKNLFRKVAKTLLEQDGSPGQDPKIDN 182
Query: 180 KQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+M+D+ N SQ C C
Sbjct: 183 DGVEMIDLAEANVENESQ-------CQC 203
>gi|395546267|ref|XP_003775011.1| PREDICTED: ras-related protein Rab-6.1-like [Sarcophilus harrisii]
Length = 334
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 128/156 (82%), Gaps = 3/156 (1%)
Query: 20 VGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 79
VGKTS+ITRF+YD FD YQATIGIDFLSKTMYLEDR++RLQLWDTAGQERFRSLIPSYI
Sbjct: 35 VGKTSLITRFVYDSFDNNYQATIGIDFLSKTMYLEDRSIRLQLWDTAGQERFRSLIPSYI 94
Query: 80 RDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDG 139
RDS+VA+IVYD+ N +F T+RWI EVRTERGGD+II+LVGNK DL KR+VS EEG
Sbjct: 95 RDSTVAIIVYDITNINTFYQTTRWIREVRTERGGDIIIMLVGNKNDLGHKREVSPEEGKQ 154
Query: 140 KAKEFGVMFIETSAKAGFNIKPL---FRKIAAALPG 172
KAK+ VMFIETSAK G+N+K R AA PG
Sbjct: 155 KAKDLNVMFIETSAKTGYNVKQASDRLRVRAARKPG 190
>gi|313241573|emb|CBY33817.1| unnamed protein product [Oikopleura dioica]
Length = 180
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 1 MASVSP---LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT 57
M S+ P L KYKLVFLG+Q VGKTS+ITRFMYD FD YQATIGIDFLSKT+ ++D T
Sbjct: 1 MESLQPVQSLKKYKLVFLGEQGVGKTSLITRFMYDSFDQHYQATIGIDFLSKTLQIDDNT 60
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
VRLQLWDTAGQERFRSLIPSYIRDS+V +IVY+V +SF WI++V+ +RG DVII
Sbjct: 61 VRLQLWDTAGQERFRSLIPSYIRDSNVGIIVYNVTEEKSFSKIDTWIKDVKDQRGEDVII 120
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
LVGNKTDL KR+V I + KA E V FIETSAK+G+N+ LF++IA A+ G+
Sbjct: 121 FLVGNKTDLEAKRKVDISVAEKKAAEHNVHFIETSAKSGYNVNALFQRIARAITGL 176
>gi|412991207|emb|CCO16052.1| predicted protein [Bathycoccus prasinos]
Length = 295
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 170/288 (59%), Gaps = 87/288 (30%)
Query: 2 ASVSPLAKYKLVFLG--------------------------------------------- 16
ASV PL+KYKLVFLG
Sbjct: 13 ASVVPLSKYKLVFLGVRSCYLVLFCQEEEEREAEEKYSISSSFRFCGGFVEEECIADFSS 72
Query: 17 -----DQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQER 70
DQSVGKTS+I+RFMYDKFD TYQATIGIDFLSKT++LE+ R VRLQLWDTAGQER
Sbjct: 73 LCIQQDQSVGKTSVISRFMYDKFDATYQATIGIDFLSKTVHLENSRGVRLQLWDTAGQER 132
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
FRSLIPSYIRDSSVAVIVYDVANRQSFLN ++WI+EV+ ERG +V+I +VGNKTDLV++R
Sbjct: 133 FRSLIPSYIRDSSVAVIVYDVANRQSFLNVAKWIDEVKQERGENVVIAIVGNKTDLVEER 192
Query: 131 QVSIEEGDGKAKEFGV-------------------MFIETSAKAGFNIKPLFRKIAAALP 171
+V EEG+ A+ V +FIE SAKAG+N+K LFRKIA ALP
Sbjct: 193 EVETEEGEKFARGLNVGNSSSHSESGSTNGGNGGAIFIEASAKAGYNVKALFRKIAMALP 252
Query: 172 GMET------------LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + +E +VDV L T +S + GCAC
Sbjct: 253 SADVNANNTNNNNNSASEANAKEQLVDVKLTSTNANSAS-----GCAC 295
>gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei]
gi|261326389|emb|CBH09349.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 230
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 150/213 (70%), Gaps = 10/213 (4%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A +P+ K+K+V LGDQ+VGKTS+ITRFMYD FD YQATIGIDF SKT+++ +R RL
Sbjct: 20 AETAPVVKHKIVLLGDQAVGKTSLITRFMYDTFDQQYQATIGIDFFSKTLHINNRATRLH 79
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQERFRSLIPSYIR+S+ V+VYD+ +R SFL+T +WI+EVR RG DVII LVG
Sbjct: 80 VWDTAGQERFRSLIPSYIRNSAATVVVYDITSRSSFLSTFKWIDEVRAARGDDVIIALVG 139
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME-----TL 176
NK D+ +KR+VS +E +A E ++F+E SAK G N+K LFRK+A A+P +E T+
Sbjct: 140 NKCDVQEKREVSADEAQKRADENRLIFVEVSAKTGTNVKSLFRKVAEAIPVVEICEKGTV 199
Query: 177 SSTKQEDMVDVNLKPTVNSSQTEQQG---GGCA 206
K+ D L P+ E G GGC
Sbjct: 200 PLGKRRD--PFLLTPSQQQKDGEGAGWREGGCC 230
>gi|68063329|ref|XP_673670.1| rab6 [Plasmodium berghei strain ANKA]
gi|56491691|emb|CAI01585.1| rab6, putative [Plasmodium berghei]
Length = 176
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A++VY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ NRQSF NT++WI+++ ERG DVIIVLVGNKTDL D R+V+ EEG KA+E+ MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTDLADLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETSAKAG NIK LF+KIAA LP +E ++ + ++VD+ L +N+++ + C C
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLPNLEN-NNNHEANVVDIQLTNDMNNNE-KNMLSKCLC 176
>gi|115451265|ref|NP_001049233.1| Os03g0191400 [Oryza sativa Japonica Group]
gi|113547704|dbj|BAF11147.1| Os03g0191400 [Oryza sativa Japonica Group]
gi|125585227|gb|EAZ25891.1| hypothetical protein OsJ_09728 [Oryza sativa Japonica Group]
Length = 189
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 145/211 (68%), Gaps = 33/211 (15%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQ G + + L+ + L
Sbjct: 5 VSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQ---GYSWAGEVPELDPK---LHQG 58
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
G + R RQSFL+ S+WIEEV T+RGGDVIIVLVGNK
Sbjct: 59 FFCGSDCLR--------------------YRQSFLSISKWIEEVNTQRGGDVIIVLVGNK 98
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
TDLVDKRQ+S +EG+ KA+E G MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS KQED
Sbjct: 99 TDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQED 158
Query: 184 MVDVNLKPTVNS-------SQTEQQGGGCAC 207
MVD+NL+P + +Q EQ+ GGC+C
Sbjct: 159 MVDINLRPAASGQIPSGAEAQEEQKAGGCSC 189
>gi|410056591|ref|XP_003954065.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41 [Pan
troglodytes]
Length = 221
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 143/184 (77%), Gaps = 2/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L K KL+FLG+QS GKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEQS-GKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 87
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E V ERG DV+I+L+GNK D
Sbjct: 88 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVXAERGDDVVIMLLGNKIDF 147
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KRQV+ E+G+ K++ VMFIETSAK G+N+K LFR++A+AL T S +E V+
Sbjct: 148 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRT-SPPPKEGTVE 206
Query: 187 VNLK 190
+ L+
Sbjct: 207 IELE 210
>gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Trypanosoma cruzi strain CL Brener]
gi|70879437|gb|EAN92612.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 268
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 136/170 (80%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+S + + K+K+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+ +++RTVRL
Sbjct: 27 SSTAAVVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLH 86
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQERFRSLIPSYIR+SS ++VYD+ +R SFL T +WI+EVR ERG V+I LVG
Sbjct: 87 VWDTAGQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVG 146
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
NK D +KR VS EE KA+E+ ++F+E SAK G N+K LFRK+A ALP
Sbjct: 147 NKLDAQEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEALP 196
>gi|358338307|dbj|GAA56637.1| Ras-related protein Rab-6.2 [Clonorchis sinensis]
Length = 336
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 139/176 (78%), Gaps = 12/176 (6%)
Query: 9 KYKLVFLGDQSV------GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
K L+FL +S GKTS+ITRFMY+ FD+ YQATIGIDFLSKTMYLEDRT+RLQL
Sbjct: 110 KTPLLFLAVRSCADALSFGKTSLITRFMYETFDSVYQATIGIDFLSKTMYLEDRTIRLQL 169
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAV+VYD+ +SF T++WI++VR ERG DVII+LVGN
Sbjct: 170 WDTAGQERFRSLIPSYIRDSSVAVVVYDICVVESFQQTAKWIDDVRNERGSDVIIMLVGN 229
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
KTDL DKR+V+ EEG+ A++ VMFIETSAKAG+N+K A+P ++ L S
Sbjct: 230 KTDLSDKRKVTTEEGERLARDLNVMFIETSAKAGYNVK------VVAIPSVKYLVS 279
>gi|343473101|emb|CCD14917.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 231
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/165 (63%), Positives = 134/165 (81%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+AKYK+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+++++R V L +WDTA
Sbjct: 27 MAKYKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTLHVDNRAVWLHVWDTA 86
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIR+S+ A+IVYD+ +R SFL+T W++EVR RG DV++ LVGNK D
Sbjct: 87 GQERFRSLIPSYIRNSAAAIIVYDITSRVSFLSTFDWVDEVRKVRGSDVVVALVGNKCDA 146
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
++R+VS EE KA E+ ++F+E SAK G N+K LFRK+A A+P
Sbjct: 147 QERREVSTEEAQKKADEYCLIFVEVSAKQGTNVKSLFRKVAEAMP 191
>gi|340500026|gb|EGR26932.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 227
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 146/199 (73%), Gaps = 4/199 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL+KYKLVFLGDQ+VGKTSII RFM+D FD T+GIDF+SKT+Y EDRT+RLQLWD
Sbjct: 11 TPLSKYKLVFLGDQAVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWD 70
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAVI YD+ N+ SF N ++W+E+VR ERG +VII LVGNKT
Sbjct: 71 TAGQERFRSLIPSYIRDSAVAVICYDITNKSSFENITKWVEDVRAERGQEVIICLVGNKT 130
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
D+ DKR + +E KAKE V F E SA +G NI+ LF+ I LPG E +S Q
Sbjct: 131 DMQDKRAIQQQEAQQKAKELDVKFFEVSALSGDNIQQLFKAIGGMLPGAE-ISQIGQNQP 189
Query: 185 VDVNLKPTVNSSQTEQQGG 203
+ N++Q E +GG
Sbjct: 190 AS---QSGQNTNQIENKGG 205
>gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
gi|134066794|emb|CAM65254.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
Length = 274
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRL 60
AS S + K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++LED R VRL
Sbjct: 17 ASSSSMQKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRL 76
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
LWDTAGQERF SLIPSYIR+S+ V+VYD+ +R +F + +WI+EVR+E G DV+I+LV
Sbjct: 77 HLWDTAGQERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLV 136
Query: 121 GNKTDLV-DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK D ++R+VS EE KA E V+F+E SAK G NIK +FR++AAALP
Sbjct: 137 GNKVDQASERREVSAEEAMKKASECNVLFMEVSAKHGTNIKHMFRQVAAALP 188
>gi|407854096|gb|EKG06642.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 272
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 133/165 (80%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+K+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+ +++RTVRL +WDTA
Sbjct: 35 VVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTA 94
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIR+SS ++VYD+ +R SFL T +WI+EVR ERG V+I LVGNK D
Sbjct: 95 GQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKLDA 154
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR VS EE KA+E+ ++F+E SAK G N+K LFRK+A ALP
Sbjct: 155 QEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEALP 199
>gi|221042816|dbj|BAH13085.1| unnamed protein product [Homo sapiens]
Length = 144
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/142 (75%), Positives = 124/142 (87%), Gaps = 1/142 (0%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTE
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVII+LVGNKTDL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAAL
Sbjct: 61 RGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 120
Query: 171 PGMETLSSTKQEDMVDVNL-KP 191
PGME+ +EDM+D+ L KP
Sbjct: 121 PGMESTQDRSREDMIDIKLEKP 142
>gi|344303734|gb|EGW33983.1| hypothetical protein SPAPADRAFT_59389 [Spathaspora passalidarum
NRRL Y-27907]
Length = 209
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 130/156 (83%), Gaps = 3/156 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDT 65
L KYK+VFLGDQSVGKTS+ITRFMYD FD TY ATIGIDFLSKTMYLE+ +T+RLQLWDT
Sbjct: 10 LRKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS VAVI YD+ N++SFLN +WI++V+ ERG DVIIVLVGNK+D
Sbjct: 70 AGQERFRSLIPSYIRDSHVAVICYDITNKKSFLNLDKWIKDVKLERGDDVIIVLVGNKSD 129
Query: 126 LV-DKRQVSIEEGDGKAKEFGV-MFIETSAKAGFNI 159
L DKRQVS+E+ + + G FIETS KA NI
Sbjct: 130 LANDKRQVSVEDVEQLHNKIGSKFFIETSTKANHNI 165
>gi|398009439|ref|XP_003857919.1| small GTP binding protein rab6-like protein [Leishmania donovani]
gi|322496122|emb|CBZ31193.1| small GTP binding protein rab6-like protein [Leishmania donovani]
Length = 274
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRL 60
AS S + K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++LED R VRL
Sbjct: 17 ASSSSMQKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRL 76
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
LWDTAGQERF SLIPSYIR+S+ V+VYD+ +R +F + +WI+EVR+E G DV+I+LV
Sbjct: 77 HLWDTAGQERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLV 136
Query: 121 GNKTDLV-DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK D ++R+VS EE KA E V+F+E SAK G NIK +FR++AAALP
Sbjct: 137 GNKVDQASERREVSAEEAMKKAFECNVLFMEVSAKHGTNIKHMFRQVAAALP 188
>gi|156099119|ref|XP_001615562.1| small GTPase Rab6 [Plasmodium vivax Sal-1]
gi|148804436|gb|EDL45835.1| small GTPase Rab6, putative [Plasmodium vivax]
Length = 176
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 138/179 (77%), Gaps = 4/179 (2%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A++VY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ NRQSF NT++WI+++ ERG DVII LVGNKTDL D R+V+ EEG KA+E+ MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQG-GGCAC 207
ETSAKAG NIK LF+KIAA LP ++ S++ ++VD+ L T N++ E+ C C
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLPNLDN-SNSNDANVVDIQL--TNNAAANEKNMLSKCMC 176
>gi|407409243|gb|EKF32227.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi
marinkellei]
Length = 283
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 133/165 (80%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K+K+V LGDQSVGKTS++TRFMYD FD YQATIGIDF SKT+ +++RTVRL +WDTA
Sbjct: 39 VVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTA 98
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIR+SS ++VYD+ +R SFL T +WI+EVR ERG V+I LVGNK+D
Sbjct: 99 GQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKSDA 158
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR VS EE KA+E+ ++F+E SAK G N+K LFRK+A LP
Sbjct: 159 QEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAELLP 203
>gi|307949535|gb|ADN96603.1| Rab GTPase 6 [Euplotes octocarinatus]
Length = 220
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+S +P+ KYK+VFLGDQSV KTSII RFM+D FD YQATIGIDFLSK M ++D+ VRLQ
Sbjct: 13 SSTAPV-KYKVVFLGDQSVCKTSIILRFMHDTFDPNYQATIGIDFLSKAMVVDDKMVRLQ 71
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERF+SLIPSYI+DSS A++ YD+ ++Q+F + W+++ R RG +V I++VG
Sbjct: 72 LWDTAGQERFKSLIPSYIQDSSFAIVCYDITSKQTFEHVKTWVDDARNIRGDNVSIIIVG 131
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
NK DL ++R+V EEG A E GV FIE SAKAG NIK LF+ +A+ LPG E
Sbjct: 132 NKIDLAEQREVYTEEGKKLADELGVSFIEASAKAGINIKALFKTLASNLPGNEN 185
>gi|389592722|ref|XP_003721632.1| small GTP binding protein rab6-like protein [Leishmania major
strain Friedlin]
gi|321438164|emb|CBZ11916.1| small GTP binding protein rab6-like protein [Leishmania major
strain Friedlin]
Length = 274
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 134/172 (77%), Gaps = 2/172 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRL 60
AS + K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++L+D R VRL
Sbjct: 17 ASSLSMPKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRL 76
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
LWDTAGQERF SLIPSYIR+S+ V+VYD+ +R +F + +WI+EVR+E G DV+I+LV
Sbjct: 77 HLWDTAGQERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGADVVIMLV 136
Query: 121 GNKTDLV-DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK D ++R+VS EE KA E V+F+E SAK G NIK +FR++AAALP
Sbjct: 137 GNKVDQASERREVSAEEAMKKASECSVLFMEVSAKHGTNIKHMFRQVAAALP 188
>gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila]
gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777802|dbj|BAJ21297.1| Rab-family small GTPase Rab6B [Tetrahymena thermophila]
Length = 227
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
+ P+ K+K+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ ++++T+RLQL
Sbjct: 5 TTGPVVKFKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTLQMDNKTLRLQL 64
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERF+SLIPSYIRDS+ A+IVYD+ N+ SF N ++W+EEV+ ERG + I ++GN
Sbjct: 65 WDTAGQERFKSLIPSYIRDSNAAIIVYDITNQNSFSNVTKWVEEVKEERGNNAFIFILGN 124
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K+DL D R+VS+EEG KAK+FG+ F E SAK G NI F+ ++ L G + + Q+
Sbjct: 125 KSDLED-RKVSLEEGQAKAKQFGLNFCEVSAKTGQNISSFFKNLSMTLSGGNSNETPNQQ 183
Query: 183 DMVD 186
D
Sbjct: 184 LQTD 187
>gi|328354607|emb|CCA41004.1| GTP-binding protein YPT6 [Komagataella pastoris CBS 7435]
Length = 250
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 141/202 (69%), Gaps = 14/202 (6%)
Query: 13 VFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 72
VFLGDQ VGKTS+ITRFMYD F+ Y AT+GIDFLSKT+YL+D+TVRLQLWDTAGQERFR
Sbjct: 56 VFLGDQGVGKTSLITRFMYDTFNDHYAATVGIDFLSKTLYLDDKTVRLQLWDTAGQERFR 115
Query: 73 SLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQV 132
SL+PSYIRDS+VA+IVYD ++ SF + +W ++VR ERG +VII LV NK DL D+R +
Sbjct: 116 SLVPSYIRDSNVAIIVYDTTSKSSFQSVDKWCDDVRNERGENVIICLVANKADLADQRVI 175
Query: 133 SIEEGDGKAKEFGV-MFIETSAKAGFNIKPLFRKIAAAL------PGMETLSSTKQEDMV 185
S E+G+ KA V +FIETS K G+N+K LFRK+A L PG + +M+
Sbjct: 176 STEDGEKKATGLKVDLFIETSTKKGYNVKNLFRKVAKTLLEQDGSPGQDPKIDNDGVEMI 235
Query: 186 DVNLKPTVNSSQTEQQGGGCAC 207
D+ N SQ C C
Sbjct: 236 DLAEANVENESQ-------CQC 250
>gi|429328144|gb|AFZ79904.1| Ras-related rab6 small GTP-binding protein, putative [Babesia equi]
Length = 224
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 143/202 (70%), Gaps = 9/202 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P + K+V LG+QS GKTSI+TRF+YD F Y ATIGIDFLSKT+ +T+RLQLWD
Sbjct: 8 TPGQRNKIVLLGEQSAGKTSIVTRFVYDHFIPAYAATIGIDFLSKTVTANGKTMRLQLWD 67
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSL+PSYIRDSS A++VYD+ NR SF T +W++E++ RG +IV+VGNKT
Sbjct: 68 TAGQERFRSLMPSYIRDSSAAIVVYDITNRDSFTRTKQWVQEIKDMRGDKAVIVIVGNKT 127
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE-- 182
DL+DKR+VS EEG+ AKE +F ETSAK G N+ LF +A L L +T+ E
Sbjct: 128 DLLDKRKVSYEEGESHAKEMNCLFRETSAKNGDNVHELFNLVAVKL-----LKTTEPEPV 182
Query: 183 --DMVDVNLKPTVNSSQTEQQG 202
+VD++LKP+V S G
Sbjct: 183 SDKLVDIDLKPSVPSEDVTCTG 204
>gi|221056628|ref|XP_002259452.1| rab6 [Plasmodium knowlesi strain H]
gi|193809523|emb|CAQ40225.1| rab6, putative [Plasmodium knowlesi strain H]
Length = 176
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 130/160 (81%), Gaps = 1/160 (0%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A++VY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ NRQSF NT++WI+++ ERG DVII LVGNKTDL D R+V+ EEG KA+E+ MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
ETSAKAG NIK LF+KIAA LP ++ S++ ++VD+ L
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLPNLDN-SNSNDANVVDIQL 159
>gi|297304080|ref|XP_002808583.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-41-like
[Macaca mulatta]
Length = 228
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 140/189 (74%), Gaps = 7/189 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQ-----ATIGIDFLSKTMYLEDRTVRLQ 61
L K KL+FLG+ S GKTS+ITRFMY+ F Q + IDFLSKTMYLED+ V+LQ
Sbjct: 29 LCKSKLLFLGEPS-GKTSVITRFMYNSFGCACQVSPSPSNCXIDFLSKTMYLEDQIVQLQ 87
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERF SLIPSYIRDS++AV+VYD+ N SF T +W+E VR ERG DV+I+LVG
Sbjct: 88 LWDTAGQERFHSLIPSYIRDSTIAVVVYDITNISSFKETDKWVEHVRAERGDDVVIMLVG 147
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL +KRQV+ EEG+ K++ VMFIETSAK G+N+K LFR++ +AL TL K
Sbjct: 148 NKIDLDNKRQVTAEEGEEKSRNLNVMFIETSAKTGYNVKKLFRRVVSALLSTRTLPPPK- 206
Query: 182 EDMVDVNLK 190
E V++ L+
Sbjct: 207 EGTVEIELE 215
>gi|302665614|ref|XP_003024416.1| hypothetical protein TRV_01379 [Trichophyton verrucosum HKI 0517]
gi|291188469|gb|EFE43805.1| hypothetical protein TRV_01379 [Trichophyton verrucosum HKI 0517]
Length = 176
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 129/157 (82%), Gaps = 12/157 (7%)
Query: 18 QSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 77
++VGKTS+ITRFMYD FD TYQATIGIDFLSK LWDTAGQERFRSLIPS
Sbjct: 14 ETVGKTSLITRFMYDSFDNTYQATIGIDFLSK------------LWDTAGQERFRSLIPS 61
Query: 78 YIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEG 137
YI++S+VAV+VYD++N +SF NT +W+++VR ERG DVII LVGNKTDL DKR+V+ E+G
Sbjct: 62 YIQNSNVAVVVYDISNAKSFQNTRKWVDDVRDERGNDVIIALVGNKTDLNDKREVTTEQG 121
Query: 138 DGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+ +AK+ G+MFIETSAK G N+K LF+KIA ALPGME
Sbjct: 122 EEEAKKNGLMFIETSAKLGHNVKNLFKKIAQALPGME 158
>gi|340505433|gb|EGR31760.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 223
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 136/174 (78%), Gaps = 5/174 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYKLVF+GDQSVGK+SII RFMYD F T Q T+GIDF++KT++LE++T+RLQLWDTAGQ
Sbjct: 12 KYKLVFIGDQSVGKSSIINRFMYDNFTGTQQPTVGIDFVAKTLHLENKTIRLQLWDTAGQ 71
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIPSYIRDS +IVYD N SF N ++W++ VR ERG DV+IVL+ NK DL D
Sbjct: 72 ERFRSLIPSYIRDSDAGIIVYDTTNLSSFQNLNKWLDYVREERGKDVLIVLLANKIDLAD 131
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
+RQVS E+G+ A E G++F E SAK G NI+ +F++I+ +L LSS KQ+
Sbjct: 132 QRQVSTEDGNKFATEQGLLFFEVSAKDGNNIQNVFKQISYSL-----LSSDKQD 180
>gi|401414254|ref|XP_003871625.1| small GTP binding protein rab6-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487843|emb|CBZ23087.1| small GTP binding protein rab6-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 274
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 130/165 (78%), Gaps = 2/165 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
K+KLV LGDQSVGKTSIITRFMYD FD YQ TIGIDF SKT++L+D R VRL LWDTAG
Sbjct: 24 KHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRLHLWDTAG 83
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QERF SLIPSYIR+S+ V+VYD+ +R +F + +WI+EVR+E G DV+I+LVGNK D
Sbjct: 84 QERFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLVGNKVDQA 143
Query: 128 -DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
++R+VS EE KA E V+F E SAK G NIK +FR++AAALP
Sbjct: 144 SERREVSAEEAMKKATECNVLFTEVSAKHGTNIKHMFRQVAAALP 188
>gi|349803423|gb|AEQ17184.1| putative rab6a member ras oncogene family [Pipa carvalhoi]
Length = 126
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 116/126 (92%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 1 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 60
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 61 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 120
Query: 125 DLVDKR 130
DL DKR
Sbjct: 121 DLADKR 126
>gi|300121531|emb|CBK22050.2| unnamed protein product [Blastocystis hominis]
Length = 298
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+YK VFLGD GKTSIITRF+YD FD TYQ+TIGIDFLSKT+ +R +R+QLWDTAGQ
Sbjct: 68 RYKFVFLGDAGTGKTSIITRFIYDSFDPTYQSTIGIDFLSKTILYNNRPIRMQLWDTAGQ 127
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERF+SLIPSYIRDSSVAVIVYD+++R SF N +W+ +VR +R +VI+V+VGNKTDL D
Sbjct: 128 ERFQSLIPSYIRDSSVAVIVYDISSRSSFDNVMKWVRDVRDQR-DEVILVIVGNKTDLSD 186
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG 172
R V+IEEG A++ MF E+SAK +NI +FRK+ LPG
Sbjct: 187 SRAVTIEEGQKLAEDNNAMFFESSAKCNYNIDTVFRKVVEKLPG 230
>gi|70948028|ref|XP_743573.1| rab6 [Plasmodium chabaudi chabaudi]
gi|56523134|emb|CAH77100.1| rab6, putative [Plasmodium chabaudi chabaudi]
Length = 175
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/142 (71%), Positives = 120/142 (84%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQ+TIGIDFLSKT+YL++ VRLQLWDTAGQERFRSLIPSYIRDS+ A++VY
Sbjct: 1 MYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ NRQSF NT++WI+++ ERG DVIIVLVGNKTDL D R+V+ EEG KA+E+ MF
Sbjct: 61 DITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTDLADLRKVTYEEGMQKAQEYNTMFH 120
Query: 150 ETSAKAGFNIKPLFRKIAAALP 171
ETSAKAG NIK LF+KIAA LP
Sbjct: 121 ETSAKAGHNIKVLFKKIAAKLP 142
>gi|384487253|gb|EIE79433.1| GTP-binding protein ryh1 [Rhizopus delemar RA 99-880]
Length = 153
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/159 (66%), Positives = 127/159 (79%), Gaps = 8/159 (5%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLED+TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYD++NRQSF NTS+WI++VR E
Sbjct: 1 MYLEDKTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDISNRQSFTNTSKWIDDVRAE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNK+DL DKR+V+ ++G+ +AKE VMFIETSAKAG N+K LF+KIA +L
Sbjct: 61 RGDDVIIVLVGNKSDLSDKREVTTDDGEKRAKELNVMFIETSAKAGHNVKTLFKKIAQSL 120
Query: 171 PGME--TLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PG++ + S ++ M VNL + TE CAC
Sbjct: 121 PGVDGSAIQSDSKDSMQKVNL------NNTESNTSSCAC 153
>gi|125542724|gb|EAY88863.1| hypothetical protein OsI_10338 [Oryza sativa Indica Group]
Length = 203
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 147/212 (69%), Gaps = 21/212 (9%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
VS LAKYKLVFLGDQ+VGKT+IITRFMYDKFD TYQ G + + L+ + L
Sbjct: 5 VSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQ---GYSWAGEVPELDPK---LHQG 58
Query: 64 DTAGQERFRSLIPSYIRDSSVAVI-VYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
G + R D V I QSFL+ S+WIEEV T+RGGDVIIVLVGN
Sbjct: 59 FFCGSDCLRC-------DWQVNFIYTLFSLLLQSFLSISKWIEEVNTQRGGDVIIVLVGN 111
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDLVDKRQ+S +EG+ KA+E G MF+ETSAKAGFNIKPLFRKIAA+LPGME LSS KQE
Sbjct: 112 KTDLVDKRQISTDEGEAKAQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQE 171
Query: 183 DMVDVNLKPTVNS-------SQTEQQGGGCAC 207
DMVD+NL+P + +Q EQ+ GGC+C
Sbjct: 172 DMVDINLRPAASGQIPSGAEAQEEQKAGGCSC 203
>gi|145549235|ref|XP_001460297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428126|emb|CAK92900.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 145/210 (69%), Gaps = 9/210 (4%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P+ KYK+VFLGDQ+VGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDT
Sbjct: 9 PMQKYKIVFLGDQAVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS A+I +D+ N +SF N RWIE+V+ ERG +V+I ++GNK D
Sbjct: 69 AGQERFRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIYILGNKID 128
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG---------METL 176
L ++RQ+ ++ + KAKE G F E SAK+ N+ F+K++ L G +
Sbjct: 129 LENERQIPTKQAEDKAKELGAQFQEVSAKSAINVAEFFKKLSYDLLGNPAEQSQNQQQPA 188
Query: 177 SSTKQEDMVDVNLKPTVNSSQTEQQGGGCA 206
QE + + +P N ++ ++QGGGC
Sbjct: 189 QQRPQEPNIQIQNQPRDNENEEKKQGGGCC 218
>gi|340960873|gb|EGS22054.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 213
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 143/210 (68%), Gaps = 12/210 (5%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKT---MYLEDRTVR 59
+ +PL K+KLVFLG+QS G I + T D T MYLEDRTVR
Sbjct: 11 NTNPLKKFKLVFLGEQS-GMRHCIRQDDIGASTNTIAPNSWQDLAHHTLHTMYLEDRTVR 69
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVL 119
LQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVL
Sbjct: 70 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFENTRKWIDDVRAERGNDVIIVL 129
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
VGNKTDL DKR+V+ ++G+ +A+ +MFIETSAK G N+K LF++IA ALPGME +
Sbjct: 130 VGNKTDLADKREVTTQQGEEEARRQDLMFIETSAKLGHNVKTLFKRIAQALPGMEGTDAA 189
Query: 180 KQ--EDMVDVNLKPTVNSSQTEQQGGGCAC 207
Q M+DV P + Q GCAC
Sbjct: 190 AQASSQMIDVK-TPATPAPQE-----GCAC 213
>gi|407920188|gb|EKG13405.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 152
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 125/157 (79%), Gaps = 5/157 (3%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++NR+SF NT +W+++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNRKSFENTRKWVDDVRGE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNKTDL DKR+V+ +G+ +AK+ +MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNNLMFIETSAKLGHNVKTLFRRIAQAL 120
Query: 171 PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PGME + M+DVN+ P ++G GCAC
Sbjct: 121 PGMEGENQQNPSQMIDVNVNPN-----PPEEGQGCAC 152
>gi|115388191|ref|XP_001211601.1| GTP-binding protein ryh1 [Aspergillus terreus NIH2624]
gi|114195685|gb|EAU37385.1| GTP-binding protein ryh1 [Aspergillus terreus NIH2624]
Length = 151
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/157 (66%), Positives = 126/157 (80%), Gaps = 6/157 (3%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNKTDL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PGME + +Q M+DVN+ P +S GCAC
Sbjct: 121 PGMEG-EANQQNQMIDVNINPKETTSND-----GCAC 151
>gi|403352976|gb|EJY76019.1| Rab6, RAB family GTPase [Oxytricha trifallax]
Length = 221
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 128/167 (76%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYK+VFLGDQSVGKTSII RF+YD FD YQATIGIDF+S MY+ED+ + L LWDTAGQ
Sbjct: 15 KYKVVFLGDQSVGKTSIIHRFIYDSFDENYQATIGIDFMSHKMYVEDKIIILNLWDTAGQ 74
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERF+SLIPSYI+DS+VA++V+D+ +RQSF + +WIE+ + R DV+++L GNK DL D
Sbjct: 75 ERFKSLIPSYIKDSAVAIVVFDITSRQSFQSVDKWIEDAKNLRDDDVLLILAGNKADLAD 134
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
+RQVS EE A + +M+ E SA+AG NI F ++A L G+ET
Sbjct: 135 QRQVSYEEATDYAAKRNIMYFEVSARAGTNITMCFNQLAKKLTGIET 181
>gi|320036381|gb|EFW18320.1| rab6 [Coccidioides posadasii str. Silveira]
Length = 152
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 125/157 (79%), Gaps = 5/157 (3%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNKTDL DKR+V+ +G+ +AK+ G+MFIETSAK G+N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PGME + M+DVN+ PT S GCAC
Sbjct: 121 PGMEGEAGRGDNQMIDVNINPTQPVSNE-----GCAC 152
>gi|403222371|dbj|BAM40503.1| small GTP binding protein rab6 [Theileria orientalis strain
Shintoku]
Length = 222
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 146/206 (70%), Gaps = 9/206 (4%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M SVS + K+V LG+QS GKTSI+TRF+YD + Y ATIGIDFLSK + + RT+RL
Sbjct: 7 MTSVSN-QRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQRTMRL 65
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSL+PSYIRDSS A++VYD+ NR+SF T WI++++ RG +IV+V
Sbjct: 66 QLWDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFERTRNWIKDIKDMRGDKAVIVVV 125
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL+DKR VS EEG+ AKE F ETSAK G N++ LF +A+ L ++T+
Sbjct: 126 GNKTDLLDKRTVSFEEGESLAKEMNCFFRETSAKNGDNVQELFTLVASEL--LKTIEPEP 183
Query: 181 QED-MVDVNLKPTVNSSQTEQQGGGC 205
D +VD++L+P+ S T GC
Sbjct: 184 VNDRLVDIDLRPSAPSENT-----GC 204
>gi|340502549|gb|EGR29228.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 219
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 146/212 (68%), Gaps = 11/212 (5%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P+ KYK+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ L+++T+RLQLWDT
Sbjct: 9 PVIKYKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTLTLDNKTLRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERF+SLIPSYIRDS+ A+IVYDV N+ SF N ++WIEEV+ ERG D +I ++GNK D
Sbjct: 69 AGQERFKSLIPSYIRDSNAAIIVYDVTNQASFNNLTKWIEEVKEERGNDALIFVLGNKAD 128
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG----------MET 175
L D R+VS EE + K+F + E SAK+G NI F+++A +L G ++
Sbjct: 129 LED-RKVSAEECQQQLKQFNLKLQEVSAKSGQNIGTFFKQLAQSLSGGQSNENQSKPGQS 187
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
S ++D + LK N+ Q +++ C
Sbjct: 188 QQSEGEKDKQPITLKNQKNNGQEKEKNKSGCC 219
>gi|345314089|ref|XP_001515936.2| PREDICTED: ras-related protein Rab-6A-like, partial
[Ornithorhynchus anatinus]
Length = 147
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 122/150 (81%), Gaps = 3/150 (2%)
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
+RLQLWDTAGQERFRSLIPSYIRDS+ AV+VYD+ N SF T++WI++VRTERG DVII
Sbjct: 1 IRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 60
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
+LVGNKTDL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+
Sbjct: 61 MLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESSQ 120
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+EDM+D+ L+ +E GGC+C
Sbjct: 121 DKSREDMIDIKLEKPQEQPVSE---GGCSC 147
>gi|242818601|ref|XP_002487150.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713615|gb|EED13039.1| RAS small monomeric GTPase Rab6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 152
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 126/157 (80%), Gaps = 5/157 (3%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTKKWVDDVRGE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNKTDL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PGME + + M+DVN+ P+ ++ GCAC
Sbjct: 121 PGMEGEAQRGENQMIDVNINPSQPTNND-----GCAC 152
>gi|323308000|gb|EGA61255.1| Ypt6p [Saccharomyces cerevisiae FostersO]
Length = 185
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/185 (59%), Positives = 136/185 (73%), Gaps = 7/185 (3%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTAGQERFRSLIPSYIRDS VA+IVY
Sbjct: 1 MYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGD-VIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGV-M 147
D+ R+SF +WIE+V+ ERG + VI+ +VGNK+DL D+RQ+S EEG+ KAK G +
Sbjct: 61 DITKRKSFEYIDKWIEDVKNERGDENVIVCIVGNKSDLSDERQISTEEGEKKAKLLGAKI 120
Query: 148 FIETSAKAGFNIKPLFRKIAAALPGMETLSST--KQEDMVDVNL-KPTV--NSSQTEQQG 202
F+ETS KAG+N+K LF+KIA +LP + ST E+ N KP V S+ EQ+
Sbjct: 121 FMETSTKAGYNVKALFKKIAKSLPEFQNSESTPLDSENANSANQNKPGVIDISTAEEQEQ 180
Query: 203 GGCAC 207
C C
Sbjct: 181 SACQC 185
>gi|71031448|ref|XP_765366.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352322|gb|EAN33083.1| GTP-binding protein rab6, putative [Theileria parva]
Length = 222
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 144/207 (69%), Gaps = 4/207 (1%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M SVS + K+V LG+QS GKTSI+TRF+YD + Y ATIGIDFLSK + + +T+RL
Sbjct: 7 MTSVSN-QRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQKTMRL 65
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSL+PSYIRDSS A++VYD+ NR+SF T +WI++++ RG +IV+V
Sbjct: 66 QLWDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVVV 125
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL+DKR VS EEG A E F ETSAK G N++ LF +A L ++T+
Sbjct: 126 GNKTDLLDKRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATEL--LKTIEPEP 183
Query: 181 QED-MVDVNLKPTVNSSQTEQQGGGCA 206
D +VD++LKP+ S T G A
Sbjct: 184 VSDKLVDIDLKPSAPSESTSCAGRSAA 210
>gi|84994386|ref|XP_951915.1| small GTP-binding protein, Rab family [Theileria annulata strain
Ankara]
gi|65302076|emb|CAI74183.1| small GTP-binding protein, Rab family, putative [Theileria
annulata]
Length = 222
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 144/207 (69%), Gaps = 4/207 (1%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M SVS + K+V LG+QS GKTSI+TRF+YD + Y ATIGIDFLSK + + +T+RL
Sbjct: 7 MTSVSN-QRNKIVLLGEQSAGKTSIVTRFVYDHYIPAYAATIGIDFLSKVVTVNQKTMRL 65
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSL+PSYIRDSS A++VYD+ NR+SF T +WI++++ RG +IV+V
Sbjct: 66 QLWDTAGQERFRSLMPSYIRDSSSAIVVYDITNRESFDRTRQWIKDIKDMRGDKAVIVVV 125
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNKTDL+DKR VS EEG A E F ETSAK G N++ LF +A L ++T+
Sbjct: 126 GNKTDLLDKRTVSFEEGQSLANEMNCFFRETSAKNGDNVQELFTLVATEL--LKTIEPEP 183
Query: 181 QED-MVDVNLKPTVNSSQTEQQGGGCA 206
D +VD++LKP+ S T G A
Sbjct: 184 VSDKLVDIDLKPSAPSESTSCAGRSAA 210
>gi|154303651|ref|XP_001552232.1| GTP-binding protein [Botryotinia fuckeliana B05.10]
Length = 152
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 104/158 (65%), Positives = 126/158 (79%), Gaps = 7/158 (4%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++NR+SF NT +W+++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNRKSFQNTRKWVDDVRGE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNKTDL DKR+V+ EG+ +AK+ +MFIETSAK G N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTSEGEEEAKKNNLMFIETSAKLGHNVKTLFRRIAQAL 120
Query: 171 PGMETLSSTKQED-MVDVNLKPTVNSSQTEQQGGGCAC 207
PGME + + M+DVN+ PT + + GCAC
Sbjct: 121 PGMEGADNAATPNQMIDVNVNPTPANQE------GCAC 152
>gi|323303807|gb|EGA57590.1| Ypt6p [Saccharomyces cerevisiae FostersB]
gi|323332365|gb|EGA73774.1| Ypt6p [Saccharomyces cerevisiae AWRI796]
gi|323336508|gb|EGA77775.1| Ypt6p [Saccharomyces cerevisiae Vin13]
gi|323347457|gb|EGA81728.1| Ypt6p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764092|gb|EHN05617.1| Ypt6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 185
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 110/185 (59%), Positives = 136/185 (73%), Gaps = 7/185 (3%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQATIGIDFLSKTMYL+D+T+RLQLWDTAGQERFRSLIPSYIRDS VA+IVY
Sbjct: 1 MYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGD-VIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGV-M 147
D+ R+SF +WIE+V+ ERG + VI+ +VGNK+DL D+RQ+S EEG+ KAK G +
Sbjct: 61 DITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKI 120
Query: 148 FIETSAKAGFNIKPLFRKIAAALPGMETLSST--KQEDMVDVNL-KPTV--NSSQTEQQG 202
F+ETS KAG+N+K LF+KIA +LP + ST E+ N KP V S+ EQ+
Sbjct: 121 FMETSTKAGYNVKALFKKIAKSLPEFQNSESTPLDSENANSANQNKPGVIDISTAEEQEQ 180
Query: 203 GGCAC 207
C C
Sbjct: 181 SACQC 185
>gi|328873768|gb|EGG22134.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 175
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 137/203 (67%), Gaps = 33/203 (16%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L+KYKLVFLGDQSVGK I I LS+ D +
Sbjct: 4 LSKYKLVFLGDQSVGKVRWI-----------------IPLLSQ--------------DLS 32
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDSSVA++VYD+ N+ SFLNT +WIE+VR+ERG +V+I+LVGNKTDL
Sbjct: 33 GQERFRSLIPSYIRDSSVAIVVYDITNKNSFLNTIKWIEDVRSERGNNVVIMLVGNKTDL 92
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM-- 184
DKRQVSIEEG+ KAKE+ +MF ETSAKAGFNIK LFRK+A+ALPG++T S K +M
Sbjct: 93 ADKRQVSIEEGEAKAKEYEIMFTETSAKAGFNIKALFRKVASALPGIDTNSIAKSAEMNE 152
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ N T + GGC C
Sbjct: 153 IDIAQSDKNNKGVTTSESGGCRC 175
>gi|170036653|ref|XP_001846177.1| trypsin [Culex quinquefasciatus]
gi|167879490|gb|EDS42873.1| trypsin [Culex quinquefasciatus]
Length = 283
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/133 (75%), Positives = 116/133 (87%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTE
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVII+LVGNKTDL DKRQVS EEG+ KAKE VMFIETSAKAG+N+K LFR++AAAL
Sbjct: 61 RGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 120
Query: 171 PGMETLSSTKQED 183
PGM++ + ED
Sbjct: 121 PGMDSTENKPPED 133
>gi|401884254|gb|EJT48423.1| hypothetical protein A1Q1_02555 [Trichosporon asahii var. asahii
CBS 2479]
gi|406695853|gb|EKC99152.1| hypothetical protein A1Q2_06556 [Trichosporon asahii var. asahii
CBS 8904]
Length = 202
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 139/210 (66%), Gaps = 33/210 (15%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFM----YDKFDTTYQA---TIGIDFLSKTMYLEDRT 57
SPL K+KLVFLG+QSVGKTS+ITRF+ + DT +A T GIDFLSKTMYLEDRT
Sbjct: 19 SPLKKFKLVFLGEQSVGKTSLITRFVSLPGQARADTPARAPTLTAGIDFLSKTMYLEDRT 78
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
VRLQLWDTAGQ +R SFLNT++W+++VR ERG DVII
Sbjct: 79 VRLQLWDTAGQL---------------------TTDRNSFLNTTKWVDDVRNERGDDVII 117
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
VLVGNKTDL DKRQV+ E+ D +AKE GVM IETSAKAG N+K LF+KIA ALPG +
Sbjct: 118 VLVGNKTDLNDKRQVTPEDLDKRAKELGVMSIETSAKAGHNVKALFKKIAMALPGGNVEA 177
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ST +DV+ ++ Q GCAC
Sbjct: 178 STTANQKIDVSA-----PAEEPPQASGCAC 202
>gi|74831371|emb|CAI39291.1| rab_C69 [Paramecium tetraurelia]
Length = 221
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 145/213 (68%), Gaps = 12/213 (5%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P+ KYK+VFLGDQ+VGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDT
Sbjct: 9 PMQKYKIVFLGDQAVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS A+I +D+ N +SF N RWIE+V+ ERG +V+I ++GNK D
Sbjct: 69 AGQERFRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIYILGNKID 128
Query: 126 LVDKRQVSIEEGDGKAK---EFGVMFIETSAKAGFNIKPLFRKIAAALPG---------M 173
L ++RQ+ ++ + KAK E G F E SAK+ N+ F+K++ L G
Sbjct: 129 LENERQIPTKQAEDKAKVFSELGAQFQEVSAKSAINVAEFFKKLSYDLLGNPAEQSQNQQ 188
Query: 174 ETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCA 206
+ QE + + +P N ++ ++QGGGC
Sbjct: 189 QPAQQRPQEPNIQIQNQPRDNENEEKKQGGGCC 221
>gi|307777800|dbj|BAJ21296.1| Rab-family small GTPase Rab6C [Tetrahymena thermophila]
Length = 224
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 141/197 (71%), Gaps = 4/197 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYKLVF+GDQSVGKTSII RF+ D F T Q T+GIDF++KT++L+++T+RLQLWDTA
Sbjct: 10 VKKYKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A+IVYD+ N+ SF + ++W++ VR ERG V+IVL+ NK DL
Sbjct: 70 GQERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDYVREERGDGVLIVLLANKLDL 129
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
D+R V +G AK+ ++F E SAK G NI +F+ +A L G E + Q DM D
Sbjct: 130 PDQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFKNLAQLLQGSE---KSDQTDM-D 185
Query: 187 VNLKPTVNSSQTEQQGG 203
+ +K N+S+ GG
Sbjct: 186 LGIKGAANNSKCTTAGG 202
>gi|406601670|emb|CCH46723.1| Guanine nucleotide-binding protein subunit beta 2 [Wickerhamomyces
ciferrii]
Length = 1045
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 125/159 (78%), Gaps = 1/159 (0%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD Y ATIGIDFLSKTMYL+D+TVRLQLWDTAGQERFRSLIPSYIRDS VAVIVY
Sbjct: 1 MYDTFDDNYAATIGIDFLSKTMYLDDKTVRLQLWDTAGQERFRSLIPSYIRDSHVAVIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGV-MF 148
D+ +++SF +WIE+V+ ER +V++ LVGNK DL DKRQVS+E+G+ KAKE +F
Sbjct: 61 DITSKKSFELVDKWIEDVKAERSENVVLCLVGNKNDLADKRQVSLEDGEAKAKELSCSIF 120
Query: 149 IETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
IETS K G+N+K +F+K+A +LP E +++ E + +
Sbjct: 121 IETSTKLGYNVKNMFKKVAKSLPEFEESKNSQPEGEIPI 159
>gi|74834283|emb|CAI44504.1| rab_A74 [Paramecium tetraurelia]
Length = 219
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 145/212 (68%), Gaps = 12/212 (5%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDT
Sbjct: 9 PMQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS A+I YD+ N +SF + +WIE+V+ ERG +V+I ++GNKTD
Sbjct: 69 AGQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKTD 128
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG-----------ME 174
L +RQ+ + + KAKE G F E SAK+ N+ F+K++ L G +
Sbjct: 129 LESERQIQFDVAEAKAKELGASFSEVSAKSAHNVAEFFKKLSYDLQGNPNEQQSSQQPQQ 188
Query: 175 TLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCA 206
+ +Q+ LK N+++ ++QGGGC
Sbjct: 189 KVQQQEQQQGQTQQLKSN-NATEDKKQGGGCC 219
>gi|119191778|ref|XP_001246495.1| hypothetical protein CIMG_00266 [Coccidioides immitis RS]
Length = 143
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 124/157 (78%), Gaps = 14/157 (8%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +W+++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWVDDVRGE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNKTDL DKR+V+ +G+ +AK+ G+MFIETSAK G+N+K LFR+IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGYNVKQLFRRIAQAL 120
Query: 171 PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PGME ++DVN+ PT S GCAC
Sbjct: 121 PGME---------VIDVNINPTQPVSNE-----GCAC 143
>gi|145540924|ref|XP_001456151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423961|emb|CAK88754.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 143/212 (67%), Gaps = 11/212 (5%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDT
Sbjct: 9 PMQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS A+I YD+ N +SF + +WIE+V+ ERG +V+I ++GNKTD
Sbjct: 69 AGQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKTD 128
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG-----------ME 174
L +RQ+ + + KAKE G F E SAK+ N+ F+K++ L G +
Sbjct: 129 LESERQIQFDVAEAKAKELGASFSEVSAKSAHNVAEFFKKLSYDLQGNPNEQQSSQQPQQ 188
Query: 175 TLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCA 206
+++ + N+++ ++QGGGC
Sbjct: 189 KKVQQQEQQQGQTQQLKSNNATEDKKQGGGCC 220
>gi|340052328|emb|CCC46604.1| putative small GTP-binding protein RAB6 [Trypanosoma vivax Y486]
Length = 223
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 134/185 (72%), Gaps = 3/185 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+YK+V LGDQSVGKTSIITRF+ F+ +Y ATIGIDF SKT+ L+ TVRL +WDTAGQ
Sbjct: 10 RYKVVLLGDQSVGKTSIITRFINGTFEESYHATIGIDFFSKTLLLDGVTVRLHVWDTAGQ 69
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFR+LIP YIRDS+ ++VYDVA+R SFLNT +W+++VR RG + IIVLVGNK+D +
Sbjct: 70 ERFRALIPGYIRDSAATLVVYDVASRLSFLNTFKWVDDVRALRGNETIIVLVGNKSDEHE 129
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
+R+V+ EE KA E+G+MF E SA G + LF+K+A L E S K V+V
Sbjct: 130 RREVTAEEAQEKADEYGIMFTEVSAMLGTGVGALFKKVAETLVLAEGTVSNKT---VEVR 186
Query: 189 LKPTV 193
+ P V
Sbjct: 187 VDPPV 191
>gi|281343000|gb|EFB18584.1| hypothetical protein PANDA_013372 [Ailuropoda melanoleuca]
Length = 123
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/123 (78%), Positives = 111/123 (90%)
Query: 40 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLN 99
ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF
Sbjct: 1 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQ 60
Query: 100 TSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNI 159
TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+
Sbjct: 61 TSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNV 120
Query: 160 KPL 162
K +
Sbjct: 121 KQV 123
>gi|229594060|ref|XP_001025689.3| Ras family protein [Tetrahymena thermophila]
gi|225567120|gb|EAS05444.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 225
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 141/198 (71%), Gaps = 5/198 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYKLVF+GDQSVGKTSII RF+ D F T Q T+GIDF++KT++L+++T+RLQLWDTA
Sbjct: 10 VKKYKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A+IVYD+ N+ SF + ++W++ VR ERG V+IVL+ NK DL
Sbjct: 70 GQERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDYVREERGDGVLIVLLANKLDL 129
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
D+R V +G AK+ ++F E SAK G NI +F+ +A L G E + Q DM D
Sbjct: 130 PDQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFKNLAQLLQGSE---KSDQTDM-D 185
Query: 187 VNLKPTV-NSSQTEQQGG 203
+ +K N+S+ GG
Sbjct: 186 LGIKGAASNNSKCTTAGG 203
>gi|294888433|ref|XP_002772463.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239876689|gb|EER04279.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 146/203 (71%), Gaps = 5/203 (2%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWD 64
P++ +K++FLGDQSVGKTSIITRF+Y FDT YQATIGIDF++K + L+D R ++LQLWD
Sbjct: 15 PISSHKVIFLGDQSVGKTSIITRFLYGAFDTHYQATIGIDFVAKVITLDDGRMIKLQLWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG--GDVIIVLVGN 122
TAGQERFRSLIP+Y+RD++ V+V+D+++++SF + W+++VR E+G G V IVLVGN
Sbjct: 75 TAGQERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSWVDQVRDEKGTNGGVEIVLVGN 134
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K D+ D RQVS EE A+E G+ + ETSAK+G +I +F +IA ++P E
Sbjct: 135 KADMADLRQVSNEEASALAEELGLKYFETSAKSGIDIDEIFTEIAKSIP--EEDPVVGGS 192
Query: 183 DMVDVNLKPTVNSSQTEQQGGGC 205
+ + V ++++ + Q GC
Sbjct: 193 NTIKVTSGDELSNAAAKSQSCGC 215
>gi|443898918|dbj|GAC76251.1| cAMP-dependent protein kinase catalytic subunit [Pseudozyma
antarctica T-34]
Length = 2447
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 130/185 (70%), Gaps = 22/185 (11%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
+LVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER
Sbjct: 8 QLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 67
Query: 71 FRSLIPSYIRDSSVAVIVYDVAN---RQSFLNTSRWIEEVRTERGGDVI---IVLVGNKT 124
FRSLIPSYIRDSSVAV+VYD+ + R R +E R E ++ I + G +
Sbjct: 68 FRSLIPSYIRDSSVAVVVYDITSKWPRPQAQRQRRGVELTRWENRPGLVPEHIEMGGRRA 127
Query: 125 DLVDKRQ----------------VSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAA 168
+R+ V+ EE + KA+EF VMFIETSAKAG N+K LF+KIA
Sbjct: 128 CGARQRRDHRARGQQDGSERQEVVTTEEAEQKAQEFNVMFIETSAKAGHNVKVLFKKIAQ 187
Query: 169 ALPGM 173
ALPGM
Sbjct: 188 ALPGM 192
>gi|312373514|gb|EFR21237.1| hypothetical protein AND_17346 [Anopheles darlingi]
Length = 194
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 107/118 (90%)
Query: 39 QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFL 98
QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF
Sbjct: 34 QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFH 93
Query: 99 NTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAG 156
TS+WI++VRTERG DVII+LVGNKTDL DKRQVS EEG+ KAKE VMFIETSAKAG
Sbjct: 94 QTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAG 151
>gi|116194366|ref|XP_001222995.1| hypothetical protein CHGG_03781 [Chaetomium globosum CBS 148.51]
gi|88179694|gb|EAQ87162.1| hypothetical protein CHGG_03781 [Chaetomium globosum CBS 148.51]
Length = 153
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 122/157 (77%), Gaps = 4/157 (2%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRAE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVIIVLVGNKTDL DKR+V+ ++G+ +AK +MF+ETSAK G N+K LF++IA AL
Sbjct: 61 RGNDVIIVLVGNKTDLNDKREVTTQQGEDEAKRNNLMFVETSAKLGHNVKTLFKRIAQAL 120
Query: 171 PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PGME + Q +++K +Q E GCAC
Sbjct: 121 PGMEGADAVAQAANQMIDVKTPAAPAQQE----GCAC 153
>gi|384491008|gb|EIE82204.1| hypothetical protein RO3G_06909 [Rhizopus delemar RA 99-880]
Length = 154
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 128/160 (80%), Gaps = 9/160 (5%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MY+E++TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYD++++ +FLNT++WI++VR E
Sbjct: 1 MYVEEKTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDISSKSTFLNTTKWIDDVRAE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG + I+VLVGNKTDL +KR+V+ EEG+ +AKE VMFIETSAKAG N+K LFR+IA AL
Sbjct: 61 RGTEAIVVLVGNKTDLNEKREVTTEEGEKRAKELNVMFIETSAKAGHNVKSLFRRIAQAL 120
Query: 171 PGMETLSS---TKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PG S ++++ M VNL N+S +E GCAC
Sbjct: 121 PGNNGYSQSIVSEKDQMQKVNL----NNSGSE--ATGCAC 154
>gi|223941194|dbj|BAH23089.1| small GTP binding protein Rab6 [Babesia bigemina]
Length = 217
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 126/162 (77%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+Q+ GKTSI+TRF+YD F Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 20 RIKIVLLGEQNTGKTSIVTRFVYDHFVPAYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFR+L+PSYIRDSS A++VYD+ +R+SF WI++++ RG +IVLVGNKTDL+D
Sbjct: 80 ERFRTLMPSYIRDSSAAIVVYDITSRESFDKVGDWIKDIKELRGDKAVIVLVGNKTDLLD 139
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
KR+VS +EG+ +AK+FG +F ETSAK G NI LF IA L
Sbjct: 140 KRKVSYDEGEEQAKKFGCLFCETSAKNGDNINDLFNPIATEL 181
>gi|18266415|gb|AAL67567.1|AF461434_1 small GTP binding protein rab6 [Babesia gibsoni]
Length = 227
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 137/189 (72%), Gaps = 3/189 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+QS GKTSI+TRF+YD F Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 20 RIKIVLLGEQSTGKTSIVTRFVYDHFVQQYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFR+L+PSYIRDSS A++VYD+ NR+SF W+++++ RG IIV+VGNKTDL+D
Sbjct: 80 ERFRTLMPSYIRDSSAAIVVYDITNRESFERVKEWVKDIKELRGDKAIIVIVGNKTDLLD 139
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED-MVDV 187
KR+VS +EG+ +A + +F ETSAK G NI LF +A L ++ L D +VD+
Sbjct: 140 KRKVSYDEGEEEAGKLECLFCETSAKNGDNINDLFNTMATEL--LKNLEPVPVNDKLVDI 197
Query: 188 NLKPTVNSS 196
+LK + N +
Sbjct: 198 DLKGSSNDT 206
>gi|145537620|ref|XP_001454521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422287|emb|CAK87124.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 126/167 (75%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDT
Sbjct: 9 PMQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS A+I YD+ N +SF + +WIE+V+ ERG +V+I ++GNK D
Sbjct: 69 AGQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKID 128
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG 172
L +R + + G+ KAKE G F E SAK+ N+ F+K++ L G
Sbjct: 129 LDQERVIQTDVGEAKAKELGASFSEVSAKSAHNVSEFFKKLSYDLQG 175
>gi|340500436|gb|EGR27313.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 201
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+KT++++D+T+RLQLWDTAGQ
Sbjct: 20 KHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTVGVDFLAKTLHVDDKTIRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIPSY+RD++ AVIV+DV N++SF NT RWI++ + RG + +LV NK D
Sbjct: 80 ERFRSLIPSYLRDATCAVIVFDVTNKESFSNTERWIKDYKDNRGAEAPCILVANKIDQKL 139
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL-PGMETLSSTKQ 181
+R++S E+G+ KAK F + + E SAK G N+ +F+ +A L P +S TKQ
Sbjct: 140 QREISQEDGEKKAKSFEMNYYEISAKTGENVVNMFKSMALQLNPSDNIVSPTKQ 193
>gi|340501463|gb|EGR28249.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 217
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
KYK+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ L+++T+RLQLWDTAGQ
Sbjct: 13 KYKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTIQLDNKTLRLQLWDTAGQ 72
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERF+SLIPSYIRDS+ A+IVYDV N+ SF N S+WIEEV+ ERG D +I ++GNK+DL D
Sbjct: 73 ERFKSLIPSYIRDSNAAIIVYDVTNQSSFNNLSKWIEEVKEERGNDALIFVLGNKSDLED 132
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
+ EE + K+F + + SAK+G NI F+++A AL G + + +
Sbjct: 133 TKNQQ-EEFNQSLKQFNLSVQKVSAKSGNNIGNFFKQLAEALSGGQQIDN 181
>gi|345315420|ref|XP_001505766.2| PREDICTED: ras-related protein Rab-6B-like, partial
[Ornithorhynchus anatinus]
Length = 205
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/123 (79%), Positives = 110/123 (89%), Gaps = 1/123 (0%)
Query: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR
Sbjct: 1 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 60
Query: 81 DSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEE-GDG 139
DS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKR++S++ GDG
Sbjct: 61 DSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRKISMKRAGDG 120
Query: 140 KAK 142
K
Sbjct: 121 DRK 123
>gi|74831248|emb|CAI39270.1| rab_B74 [Paramecium tetraurelia]
Length = 219
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 125/165 (75%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P+ K+K+VFLG+QSVGKTSII RF++D F Q T+GIDF+SKT+ +++++VRLQLWDT
Sbjct: 9 PMQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS A+I YD+ N +SF + +WIE+V+ ERG +V+I ++GNK D
Sbjct: 69 AGQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKID 128
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
L +R + + G+ KAKE G F E SAK+ N+ F+K++ L
Sbjct: 129 LDQERVIQTDVGEAKAKELGASFSEVSAKSAHNVSEFFKKLSYDL 173
>gi|156088339|ref|XP_001611576.1| Ras family protein [Babesia bovis]
gi|154798830|gb|EDO08008.1| Ras family protein [Babesia bovis]
Length = 227
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 139/191 (72%), Gaps = 5/191 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ K+V LG+Q+ GKTSI+TRF+YD F Y ATIGIDFLSK + + +T+RLQLWDTAGQ
Sbjct: 20 RIKIVLLGEQNTGKTSIVTRFVYDHFVPAYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFR+L+PSYIRDSS A++VYD+ + +SF WI++++ RG II++VGNKTDL+D
Sbjct: 80 ERFRTLMPSYIRDSSAAIVVYDITSPESFEKVKDWIKDIKELRGDKAIIMIVGNKTDLLD 139
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED-MVDV 187
KR+VS +EG+ +AK+ +F ETSAK G NI LF ++ L M+ L D +VD+
Sbjct: 140 KRKVSYDEGEEEAKKLECLFCETSAKNGDNINDLFNTVSTEL--MKNLEPVPVNDKLVDI 197
Query: 188 NLKPTVNSSQT 198
+LK NS++T
Sbjct: 198 DLKS--NSAET 206
>gi|5020094|gb|AAD38018.1|AF148210_1 GTPase Rab6 [Rattus norvegicus]
Length = 140
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/143 (67%), Positives = 115/143 (80%), Gaps = 3/143 (2%)
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII+LVGNKT
Sbjct: 1 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKT 60
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K LFR++AAALPGME+ +EDM
Sbjct: 61 DLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 120
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+ L+ E GGC+C
Sbjct: 121 IDIKLEKPQEQPVNE---GGCSC 140
>gi|409045798|gb|EKM55278.1| hypothetical protein PHACADRAFT_184090 [Phanerochaete carnosa
HHB-10118-sp]
Length = 218
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 135/213 (63%), Gaps = 45/213 (21%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITR--------FMYDKFDTTYQATIGIDFLSKTMYLE 54
S PL + K+V LGDQSVGKTS+ITR FMYD FD TYQATIGIDFLSK MYLE
Sbjct: 12 SSPPLKRSKIVLLGDQSVGKTSLITRRVVSLRLTFMYDTFDNTYQATIGIDFLSKAMYLE 71
Query: 55 DRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDV--------ANRQSFLNTSRWIEE 106
DRTVRLQLWDTAGQER+RSLIPSYIRD SVA++V+D+ +RQSFL+TS+WI++
Sbjct: 72 DRTVRLQLWDTAGQERYRSLIPSYIRDCSVAIVVFDITTFIDIVFVDRQSFLSTSKWIDD 131
Query: 107 VRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKI 166
VR+ERG DVI+VLVGNK DL DKR PL R +
Sbjct: 132 VRSERGNDVIVVLVGNKADLSDKR----------------------------YDPLTRFL 163
Query: 167 AAALPGMETLSSTKQEDMVDVNLKPTVNSSQTE 199
A L ++T S T+ + V KP V+ + E
Sbjct: 164 NACLGDIQT-SHTRGGECESVGAKPHVHGNVGE 195
>gi|67901230|ref|XP_680871.1| hypothetical protein AN7602.2 [Aspergillus nidulans FGSC A4]
gi|40742992|gb|EAA62182.1| hypothetical protein AN7602.2 [Aspergillus nidulans FGSC A4]
Length = 169
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 125/169 (73%), Gaps = 15/169 (8%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QS T + + G FL M +RTVRLQLWD
Sbjct: 12 NPLKKFKLVFLGEQSGAHT------------LSLHSQTGARFL---MLYYNRTVRLQLWD 56
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGNKT
Sbjct: 57 TAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKT 116
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
DL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA ALP +
Sbjct: 117 DLSDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPDL 165
>gi|357463331|ref|XP_003601947.1| Ras-related protein RABH1B [Medicago truncatula]
gi|355490995|gb|AES72198.1| Ras-related protein RABH1B [Medicago truncatula]
Length = 119
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/115 (82%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
Query: 93 NRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETS 152
NRQSFLNT++W+EEVR ERG DVIIVLVGNKTDLV+KRQVSIEEGD K++E G+MFIETS
Sbjct: 6 NRQSFLNTNKWVEEVRAERGSDVIIVLVGNKTDLVEKRQVSIEEGDAKSRESGIMFIETS 65
Query: 153 AKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
AKAGFNIKPLFRKIA+ALPGME+L STKQ+DMVDVNLK T SS+TEQQGGGC+C
Sbjct: 66 AKAGFNIKPLFRKIASALPGMESL-STKQDDMVDVNLKSTAYSSRTEQQGGGCSC 119
>gi|145477535|ref|XP_001424790.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391856|emb|CAK57392.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 127/166 (76%), Gaps = 1/166 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
AK+K+VF+G+Q+VGKTSII RF+Y++ ++Q TIGIDFLSK + +E++TVRLQLWDTA
Sbjct: 11 FAKFKIVFIGNQAVGKTSIIARFVYEQIPQSHQPTIGIDFLSKCIQVENKTVRLQLWDTA 70
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS AV+ YDV+N QSF + W+E VR ERG DV+ VL+ NK D
Sbjct: 71 GQERFRSLIPSYIRDSHAAVLCYDVSNAQSFADIKSWLEYVREERGSDVVGVLIANKID- 129
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG 172
+++R V+ +EG+ AKE +++ E SAK G N++ F+ +A L G
Sbjct: 130 IEERVVTTQEGEKLAKEQELLYYEVSAKEGTNVQQTFKNLALKLLG 175
>gi|74833811|emb|CAI39365.1| rab_A32 [Paramecium tetraurelia]
Length = 215
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 127/166 (76%), Gaps = 1/166 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
AK+K+VF+G+Q+VGKTSII RF+Y++ ++Q TIGIDFLSK + +E++TVRLQLWDTA
Sbjct: 11 FAKFKIVFIGNQAVGKTSIIARFVYEQIPQSHQPTIGIDFLSKCIQVENKTVRLQLWDTA 70
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS AV+ YDV+N QSF + W+E VR ERG DV+ VL+ NK D
Sbjct: 71 GQERFRSLIPSYIRDSHAAVLCYDVSNAQSFADIKSWLEYVREERGSDVVGVLIANKID- 129
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG 172
+++R V+ +EG+ AKE +++ E SAK G N++ F+ +A L G
Sbjct: 130 IEERVVTTQEGEKLAKEQELLYYEVSAKEGTNVQQTFKNLALKLLG 175
>gi|190348918|gb|EDK41472.2| hypothetical protein PGUG_05570 [Meyerozyma guilliermondii ATCC
6260]
Length = 180
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/184 (57%), Positives = 125/184 (67%), Gaps = 12/184 (6%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIV 88
MYD FD Y ATIGIDFLSKTMYLED RT+RLQLWDTAGQERFRSLIPSYIRDS VAV+
Sbjct: 1 MYDTFDDQYAATIGIDFLSKTMYLEDNRTIRLQLWDTAGQERFRSLIPSYIRDSHVAVVC 60
Query: 89 YDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMF 148
YD+ N++SF N +WI +VR ERG D IIVLVGNK DL +KRQV+ EE + K+ G F
Sbjct: 61 YDITNKKSFQNLEKWINDVRLERGDDAIIVLVGNKLDLKNKRQVTAEECEELHKKVGSKF 120
Query: 149 -IETSAKAGFNIKPLFRKIAAALP------GMETLSSTKQEDMVDVNLKPTVNSSQTEQQ 201
IETS KA N+K LF+KI LP G + + +D+ TVN + Q+
Sbjct: 121 YIETSTKANHNVKLLFKKIGQCLPDSSDGEGNGDSQNAGNTETIDI----TVNQNPEGQK 176
Query: 202 GGGC 205
G C
Sbjct: 177 SGCC 180
>gi|117939075|dbj|BAF36691.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 205
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 130/189 (68%), Gaps = 2/189 (1%)
Query: 16 GDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
GDQ VGKTSI++RFM+D F++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+
Sbjct: 1 GDQGVGKTSILSRFMFDSFESNYLPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLL 60
Query: 76 PSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIE 135
P+YIRD + AVIV+DV NR SF + WI +VR +V++++VGNKTDL DKRQV E
Sbjct: 61 PNYIRDCAAAVIVFDVTNRLSFDHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVRTE 120
Query: 136 EGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNS 195
E KA + E SAKAG+N+K LF++IA L + S +E+ +NL S
Sbjct: 121 ELQEKANLLSCLSTEASAKAGYNVKNLFKRIAVTL--LSVGGSPPEENTNVLNLSGEAYS 178
Query: 196 SQTEQQGGG 204
S T G
Sbjct: 179 SATNTAASG 187
>gi|340501363|gb|EGR28156.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 131/190 (68%), Gaps = 21/190 (11%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S P+ KYK+VFLGDQSVGKTSII RF+YD F + Q T+GIDF+ KT+ LE++T+RLQL
Sbjct: 6 STGPVVKYKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTISLENKTLRLQL 65
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDV--------------------ANRQSFLNTSR 102
WDTAGQERF+SLIPSYIRDS+ A+IVY+V ++ SF N S+
Sbjct: 66 WDTAGQERFKSLIPSYIRDSNAAIIVYEVIRVFIYYFYYFQLFFYLKKQKDQSSFNNLSK 125
Query: 103 WIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPL 162
WIEEV+ ERG D +I ++GNK+DL D R+VS E K+FG+ E SAK+G NI
Sbjct: 126 WIEEVKEERGNDALIFVLGNKSDLED-RKVSTTEATQVLKQFGLNVQEVSAKSGQNIGTF 184
Query: 163 FRKIAAALPG 172
F++++ AL G
Sbjct: 185 FKQLSYALSG 194
>gi|117939079|dbj|BAF36693.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 206
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 131/182 (71%), Gaps = 4/182 (2%)
Query: 16 GDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
GDQ VGKTSI++RFM+D ++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+
Sbjct: 1 GDQGVGKTSILSRFMFDSLESNYPPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLL 60
Query: 76 PSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIE 135
P+YIRD + AVIV+DV NR SF + WI +VR +V++++VGNKTDL DKRQVS E
Sbjct: 61 PNYIRDCAAAVIVFDVTNRLSFEHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVSSE 120
Query: 136 EGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV-NLKPTVN 194
E KA + E SAKAG+N+K LF+KIA L + +++ED +V NL +
Sbjct: 121 ELQDKANVLCCLSTEASAKAGYNVKNLFKKIALTLL---NVGGSQREDNSNVLNLTGEAH 177
Query: 195 SS 196
SS
Sbjct: 178 SS 179
>gi|145488520|ref|XP_001430264.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833736|emb|CAI39339.1| rab_B32 [Paramecium tetraurelia]
gi|124397360|emb|CAK62866.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 141/209 (67%), Gaps = 13/209 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
AK+K+VF+G+Q+VGKTSII RF+Y++ +Q TIGIDFLSK + ++++TVRLQLWDTA
Sbjct: 11 FAKFKIVFIGNQAVGKTSIIARFVYEQIPEQHQPTIGIDFLSKCIQVDNKTVRLQLWDTA 70
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS AV+ YDV+N QSF + W++ VR ERG DV+ VL+ NK D+
Sbjct: 71 GQERFRSLIPSYIRDSHAAVLCYDVSNAQSFADIKAWLDYVREERGSDVVGVLIANKIDI 130
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL---------PGMETLS 177
D R V+ +EG+ A+E +++ E SAK G N++ F+ +A L P E
Sbjct: 131 KD-RVVTTQEGEKLAQEQDLLYYEVSAKEGTNVQQTFKNLALKLLGPIQDVEQPTTEIEQ 189
Query: 178 STKQEDMVDVNLKPT-VNSSQTEQQGGGC 205
ST + ++ +KP + Q++QQ C
Sbjct: 190 STNNNN--NIQIKPQDKQTPQSDQQKCQC 216
>gi|29841343|gb|AAP06375.1| similar to NM_130025 putative small GTP-binding protein in
Arabidopsis thaliana [Schistosoma japonicum]
Length = 211
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 133/204 (65%), Gaps = 5/204 (2%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
+ K K VFLGD VGKT II RFMY+ FD Y+ATIGIDF+SKT+ +++VRLQLWDT
Sbjct: 10 SVTKAKCVFLGDYGVGKTCIILRFMYETFDRAYKATIGIDFVSKTLCFNEKSVRLQLWDT 69
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYI+DS VA++VYDV NR SF+ S WI+E+R ER ++ LVGNK D
Sbjct: 70 AGQERFRSLIPSYIKDSFVAIVVYDVTNRDSFIKASDWIKEIRAERSSKTLVFLVGNKVD 129
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL-PGMETLSSTKQEDM 184
L D+R VS EE KA++ + FIETSAK F I+ LF ++ + M L +Q +
Sbjct: 130 LEDERVVSAEEAAEKAEKENLFFIETSAKTDFQIQKLFDEVVKEIVKNMHNLDEQEQTAL 189
Query: 185 VDVNLKPTVNSSQTEQQG-GGCAC 207
+ P N + G C C
Sbjct: 190 KN---NPNKNIELNNEHGYWNCWC 210
>gi|260950339|ref|XP_002619466.1| hypothetical protein CLUG_00625 [Clavispora lusitaniae ATCC 42720]
gi|238847038|gb|EEQ36502.1| hypothetical protein CLUG_00625 [Clavispora lusitaniae ATCC 42720]
Length = 172
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIV 88
MYD FD Y ATIGIDFLSKTMYLED +TVRLQLWDTAGQERFRSLIPSYIRDS VAVI
Sbjct: 1 MYDTFDDQYAATIGIDFLSKTMYLEDNKTVRLQLWDTAGQERFRSLIPSYIRDSHVAVIC 60
Query: 89 YDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMF 148
YD+ +++SF + ++W+ +VR ERG +VI+V+VGNK+DL KRQVS E+ + K G F
Sbjct: 61 YDITSKKSFDSLAKWVNDVRMERGEEVIVVIVGNKSDLSAKRQVSAEDAEAFCKSVGGKF 120
Query: 149 -IETSAKAGFNIKPLFRKIAAALPGM-ETLSSTKQEDMVDVNLKPTVNS 195
IETS KA N+K LF++IAA LP E+ + +Q + V+++++ +S
Sbjct: 121 VIETSTKANHNVKLLFKRIAACLPEFSESAAEAEQPETVNISIEAPESS 169
>gi|74834309|emb|CAI44512.1| rab_C15 [Paramecium tetraurelia]
Length = 217
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 4 VSPLAKYKLVFLGDQSVGKT--SIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
V+PL+KYKL +G ++ R M +K + T+GIDF+SKT+Y EDRT+RLQ
Sbjct: 9 VAPLSKYKLWERHPLQIGLCLIHLMGRIMQEKVKLQNKPTVGIDFISKTLYYEDRTIRLQ 68
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
LWDTAGQERFRSLIPSYIRDS+VAV+ YDV + SF + +RWI +VR ERG DVII +V
Sbjct: 69 LWDTAGQERFRSLIPSYIRDSAVAVVCYDVEVKTSFASITRWISDVRLERGNDVIIFIVA 128
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
NK D VD R +S EEG AKE FIE SAK G N++ LF++IAA LPG ET
Sbjct: 129 NKID-VDNRVISTEEGANLAKECDAHFIEVSAKTGNNVELLFKQIAATLPGTET 181
>gi|146413158|ref|XP_001482550.1| hypothetical protein PGUG_05570 [Meyerozyma guilliermondii ATCC
6260]
Length = 180
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 124/184 (67%), Gaps = 12/184 (6%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIV 88
MYD FD Y ATIGIDFL KTMYLED RT+RLQLWDTAGQERFRSLIPSYIRDS VAV+
Sbjct: 1 MYDTFDDQYAATIGIDFLLKTMYLEDNRTIRLQLWDTAGQERFRSLIPSYIRDSHVAVVC 60
Query: 89 YDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMF 148
YD+ N++SF N +WI +VR ERG D IIVLVGNK DL +KRQV+ EE + K+ G F
Sbjct: 61 YDITNKKSFQNLEKWINDVRLERGDDAIIVLVGNKLDLKNKRQVTAEECEELHKKVGSKF 120
Query: 149 -IETSAKAGFNIKPLFRKIAAALP------GMETLSSTKQEDMVDVNLKPTVNSSQTEQQ 201
IETS KA N+K LF+KI LP G + + +D+ TVN + Q+
Sbjct: 121 YIETSTKANHNVKLLFKKIGQCLPDSSDGEGNGDSQNAGNTETIDI----TVNQNPEGQK 176
Query: 202 GGGC 205
G C
Sbjct: 177 SGCC 180
>gi|340506147|gb|EGR32356.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 248
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 130/182 (71%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S S K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+K++ L+D+ +RLQL
Sbjct: 15 SNSQRIKHKIIFLGDQYVGKTCIIERFMYDVFDEKSHPTVGVDFLAKSIKLDDKNIRLQL 74
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSY+RD++ A+IV+DV N++SF N RW+++ R RG D VL+GN
Sbjct: 75 WDTAGQERFRSLIPSYLRDATCAIIVFDVTNKESFNNIERWLKDYRDNRGNDASCVLIGN 134
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K D+ R++S ++ + K K +++ + SAK G N++ +F +A +L +E + K+E
Sbjct: 135 KIDMKQIREISQQQAEEKGKMLNMLYFDISAKTGENVQNMFLTMAKSLIPIENNNILKRE 194
Query: 183 DM 184
++
Sbjct: 195 EI 196
>gi|440295244|gb|ELP88157.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 197
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 134/205 (65%), Gaps = 10/205 (4%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLE--DRTVRLQ 61
+S L K+K+VFLGD SVGKT II RFM F T Y+ATIG DF SKT+ E +TV+LQ
Sbjct: 1 MSGLKKHKIVFLGDSSVGKTCIIGRFMTSSFCTNYEATIGTDFSSKTLTDEATQQTVQLQ 60
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SLIPSYIRDSSVAVIVYD+ +RQ+F N W+E+V ++ GDVI+ +VG
Sbjct: 61 IWDTAGQERYHSLIPSYIRDSSVAVIVYDINDRQTFDNIDNWVEDVHSKEKGDVILFIVG 120
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR+V+ +E KA ETSAK N+ LF+ I L L TK
Sbjct: 121 NKLDL-GKREVTQKEAIAKADYHHCQCFETSAKENCNVTELFKAITERLCA---LQPTKD 176
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCA 206
E + VNLK + TE+ GGC
Sbjct: 177 ETVETVNLK----TQPTEKTNGGCC 197
>gi|146184753|ref|XP_001030061.2| Ras family protein [Tetrahymena thermophila]
gi|146142676|gb|EAR82398.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777804|dbj|BAJ21298.1| Rab-family small GTPase Rab6D [Tetrahymena thermophila]
Length = 265
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 133/196 (67%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+KT++++D+++RL LWDTAGQ
Sbjct: 20 KHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRLSLWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIPSY+RD++ AVIV+DV N++SF N RWI++ + RG + VLV NK DL
Sbjct: 80 ERFRSLIPSYLRDATCAVIVFDVTNKESFSNVDRWIKDYKDNRGSEAPCVLVANKIDLKL 139
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
R+V + + + KAKE + F E SAK G N+ +F+ +A +L +E + D ++
Sbjct: 140 TREVQLADLEKKAKENNMKFYEISAKTGENVANMFKDMAISLQPVENSILSPNADNLNNQ 199
Query: 189 LKPTVNSSQTEQQGGG 204
K ++Q +Q G
Sbjct: 200 KKDYQFANQNKQPSTG 215
>gi|117939077|dbj|BAF36692.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 205
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Query: 16 GDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI 75
GDQ VGKTSI++RFM+D F++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+
Sbjct: 1 GDQGVGKTSILSRFMFDSFESNYLPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLL 60
Query: 76 PSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIE 135
P+YIRD + AVIV+DV NR S+ + WI +VR +V++++VGNKTDL DKRQV+ E
Sbjct: 61 PNYIRDCAAAVIVFDVTNRLSYEHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVTSE 120
Query: 136 EGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
E KA + E SAKAG+N+K +F+KIA L + ++ ED +V
Sbjct: 121 ELQEKANALCCLSTEASAKAGYNVKNVFKKIAVTLL---NVGGSQHEDNSNV 169
>gi|313234682|emb|CBY10635.1| unnamed protein product [Oikopleura dioica]
Length = 148
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 112/144 (77%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD YQATIGIDFLSKT+ ++D TVRLQLWDTAGQERFRSLIPSYIRDS+V +IVY
Sbjct: 1 MYDSFDQHYQATIGIDFLSKTLQIDDNTVRLQLWDTAGQERFRSLIPSYIRDSNVGIIVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
+V +SF WI++V+ +RG DVII LVGNKTDL KR+V I + KA E + FI
Sbjct: 61 NVTEEKSFAKIDTWIKDVKDQRGDDVIIFLVGNKTDLEAKRKVDISVAEKKAAEHNIHFI 120
Query: 150 ETSAKAGFNIKPLFRKIAAALPGM 173
ETSAK+G+N+ LF++IA A+ G+
Sbjct: 121 ETSAKSGYNVNALFQRIARAITGL 144
>gi|183231256|ref|XP_655064.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802558|gb|EAL49676.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 196
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 134/202 (66%), Gaps = 6/202 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F+T Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMNGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AVIVYD+ +RQSF + +WIE+VR++ G++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
DL R+V+ +E K + + M ETSAK NI LF I L TL +E
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLS---TLEPPVEEH 176
Query: 184 MVDVNLKPTVNSSQTEQQGGGC 205
+ V+L ++ E GG C
Sbjct: 177 IETVSLGS--KKAENESNGGCC 196
>gi|183232546|ref|XP_655103.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801978|gb|EAL49717.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709304|gb|EMD48591.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 134/202 (66%), Gaps = 6/202 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F+T Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AVIVYD+ +RQSF + +WIE+VR++ G++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
DL R+V+ +E K + + M ETSAK NI LF I L TL +E
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLS---TLEPPVEEH 176
Query: 184 MVDVNLKPTVNSSQTEQQGGGC 205
+ V+L ++ E GG C
Sbjct: 177 IETVSLGS--KKAENESNGGCC 196
>gi|344249535|gb|EGW05639.1| Ras-related protein Rab-6B [Cricetulus griseus]
Length = 140
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 110/129 (85%), Gaps = 2/129 (1%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF TS+WI++VRTE
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTE 60
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG DVII+LVGNKTDL DKRQ++IEEG+ +AKE VMFIETSAK G+N+K + ++A +L
Sbjct: 61 RGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQVRTQLAMSL 120
Query: 171 --PGMETLS 177
G+E L+
Sbjct: 121 SCSGLEALT 129
>gi|256053248|ref|XP_002570111.1| rab6 [Schistosoma mansoni]
gi|350646524|emb|CCD58834.1| rab6, putative [Schistosoma mansoni]
Length = 196
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 131/179 (73%), Gaps = 2/179 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ K K VFLG+ GKTSII RFM+D FD Y ATIGIDF+SKT+ ++++RLQLWDTA
Sbjct: 11 IIKSKCVFLGEHGAGKTSIILRFMHDTFDPAYHATIGIDFVSKTLCFNEKSIRLQLWDTA 70
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERF SLIPSYI+DSSVA++VYDV +R+SF+ +WI E+RTER +I LVGNK DL
Sbjct: 71 GQERFSSLIPSYIKDSSVAIVVYDVTSRESFVRADKWISEIRTERPSKTLIFLVGNKVDL 130
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
DKR V+ EE KA++ + F+ETSAK F I LF ++ + +++++++K+ + +
Sbjct: 131 EDKRVVTTEEAAKKAEKENLFFVETSAKTDFQINKLFDEVVMEI--VKSINNSKENERI 187
>gi|385305861|gb|EIF49808.1| gtp-binding protein ryh1 [Dekkera bruxellensis AWRI1499]
Length = 139
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 107/124 (86%), Gaps = 1/124 (0%)
Query: 7 LAKYKL-VFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
L KYK+ V LGDQ VGKTS+ITRFMYD FD+ Y ATIGIDFLSKTMYL+D+T+RLQLWDT
Sbjct: 2 LTKYKISVSLGDQGVGKTSLITRFMYDTFDSHYAATIGIDFLSKTMYLDDKTIRLQLWDT 61
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERFRSLIPSYIRDS+VA++VYD+ NR S + +W++ +R ERG DV+I+LVGNK+D
Sbjct: 62 AGQERFRSLIPSYIRDSNVAIVVYDITNRDSXNDVQKWLDYIREERGKDVLIILVGNKSD 121
Query: 126 LVDK 129
L DK
Sbjct: 122 LKDK 125
>gi|56790148|dbj|BAD82870.1| small GTPase EhRabX22 [Entamoeba histolytica]
Length = 192
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K K+VFLGD SVGKT II RFM F+T Y+ATIG DF +KTM ++++++LQ+WDTAGQ
Sbjct: 2 KQKIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQ 61
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+RSLIPSYIRDSS AVIVYD+ +RQSF + +WIE+VR++ G++ + LVGNK DL
Sbjct: 62 ERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNKLDL-G 120
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
R+V+ +E K + + M ETSAK NI LF I L TL +E + V+
Sbjct: 121 HREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLS---TLEPPVEEHIETVS 177
Query: 189 LKPTVNSSQTEQQGGGC 205
L ++ E GG C
Sbjct: 178 LGS--KKAENESNGGCC 192
>gi|167389639|ref|XP_001739030.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897453|gb|EDR24605.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 132/202 (65%), Gaps = 6/202 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F T Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AVIVYD+ +RQSF N +WIE+VR++ G++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
DL R+V+ +E K + + ETSAK NI LF I L TL +E
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKLS---TLEPPVEEH 176
Query: 184 MVDVNLKPTVNSSQTEQQGGGC 205
+ V++ ++ E GG C
Sbjct: 177 IETVSIGN--KKAENESNGGCC 196
>gi|167389097|ref|XP_001738817.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897808|gb|EDR24880.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 130/202 (64%), Gaps = 6/202 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ L K K+VFLGD SVGKT II RFM F T Y+ATIG DF +KTM ++++++LQ+W
Sbjct: 1 MNTLMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIW 60
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDSS AVIVYD+ +RQSF N +WIE+VR++ G++ + LVGNK
Sbjct: 61 DTAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNK 120
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
DL R+V+ +E K + + ETSAK NI LF I L +E E
Sbjct: 121 LDL-GHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKLSTLEPPVEDHIET 179
Query: 184 MVDVNLKPTVNSSQTEQQGGGC 205
+ N K ++ E GG C
Sbjct: 180 VSIGNKK-----AENESNGGCC 196
>gi|388500442|gb|AFK38287.1| unknown [Lotus japonicus]
Length = 106
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/94 (96%), Positives = 94/94 (100%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANR 94
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA++
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASK 94
>gi|324514427|gb|ADY45866.1| GTP-binding protein ryh1 [Ascaris suum]
Length = 226
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 119/164 (72%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
L KYK+VFLG+Q VGK+SIIT+F+ ++ Y ATIGIDF SK + +E +TVRLQ+WDTA
Sbjct: 34 LTKYKIVFLGEQGVGKSSIITKFLRNEVAEDYIATIGIDFFSKNIVVEGKTVRLQIWDTA 93
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSY+RDS VAVIVYDV++ SF T +W V +R GD+ I+LVGNK+DL
Sbjct: 94 GQERFRSLIPSYLRDSDVAVIVYDVSSPTSFAKTRQWFNYVNRQRAGDIAIILVGNKSDL 153
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
DKR++S E G+ A + ++ SA G NI+ LF IA L
Sbjct: 154 TDKRKISYESGERIAAAWNCRHMDVSALTGRNIQELFVFIAGTL 197
>gi|117939023|dbj|BAF36665.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 179
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 125/178 (70%), Gaps = 2/178 (1%)
Query: 21 GKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 80
GKTSI++RFM+D F++ Y TIGIDFL+K+MYL+ +TVRLQLWDTAGQE+FRSL+P+YIR
Sbjct: 1 GKTSILSRFMFDSFESNYLPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLLPNYIR 60
Query: 81 DSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGK 140
D + AVIV+DV NR SF + WI +VR +V++++VGNKTDL DKRQV EE K
Sbjct: 61 DCAAAVIVFDVTNRLSFDHLEGWINDVRNGVNDNVVLMIVGNKTDLEDKRQVRTEELQEK 120
Query: 141 AKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQT 198
A + E SAKAG+N+K +F++IA L + S +E+ +NL SS T
Sbjct: 121 ANLLSCLSTEASAKAGYNVKNIFKRIAVTL--LSVGGSPPEENTNVLNLSGEAYSSST 176
>gi|224086807|ref|XP_002335184.1| predicted protein [Populus trichocarpa]
gi|222833035|gb|EEE71512.1| predicted protein [Populus trichocarpa]
Length = 96
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/96 (94%), Positives = 94/96 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA+VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT+RL
Sbjct: 1 MATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTIRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQS 96
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+ S
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASELS 96
>gi|340503282|gb|EGR29885.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 213
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 120/166 (72%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K++FLGDQ VGKT II RFMYD FD TIG+DFL+KT+ ++++++RLQLWDTAGQ
Sbjct: 21 KHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTIGVDFLAKTITIDEKSIRLQLWDTAGQ 80
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIPSY+RD++ AVIV+D+ + SF N +WI++ + RG D +LV NK D+
Sbjct: 81 ERFRSLIPSYLRDATCAVIVFDITQKTSFDNLDKWIQDYKDNRGIDAPFILVANKLDMKL 140
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
R+V+ +E + KA+ V + E SAK G N+ +F+ +A +L +E
Sbjct: 141 SREVTQQEAEQKAQSIRVNYYEISAKTGENVLNMFKSMATSLQPIE 186
>gi|11558651|emb|CAC17834.1| secretion related GTPase (SrgC) [Aspergillus niger]
Length = 138
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 112/145 (77%), Gaps = 7/145 (4%)
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSYIRDSSVAV+VYD++N +SF NT +WI++VR ERG DVIIVLVGN
Sbjct: 1 WDTAGQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGN 60
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
KTDL DKR+V+ +G+ +AK+ G+MFIETSAK G N+K LFR+IA A PGME S ++
Sbjct: 61 KTDLNDKREVTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAXAXPGMEV--SHRRH 118
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCAC 207
M+DVN+ + + GCAC
Sbjct: 119 QMIDVNI-----TRKETXTNDGCAC 138
>gi|357463333|ref|XP_003601948.1| Ras-related protein Rab-6A [Medicago truncatula]
gi|355490996|gb|AES72199.1| Ras-related protein Rab-6A [Medicago truncatula]
Length = 101
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/93 (96%), Positives = 91/93 (97%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M +VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MVTVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVAN 93
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVAT 93
>gi|384499370|gb|EIE89861.1| hypothetical protein RO3G_14572 [Rhizopus delemar RA 99-880]
Length = 142
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 113/161 (70%), Gaps = 23/161 (14%)
Query: 51 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTE 110
MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYD+ ++VR E
Sbjct: 1 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDIT------------KDVRAE 48
Query: 111 RGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RG +VIIVLVGNKTDL DKR+V++EEG+ KA + GV+FIETSAKAG N+K LF++IA AL
Sbjct: 49 RGLEVIIVLVGNKTDLSDKREVTLEEGEKKASDTGVLFIETSAKAGHNVKSLFKRIALAL 108
Query: 171 PGMET----LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
PGM + Q VD+N NSS CAC
Sbjct: 109 PGMNNDANGIEEKDQLQKVDLNTSEQTNSS-------SCAC 142
>gi|449691705|ref|XP_002170841.2| PREDICTED: ras-related protein Rab-6A-like [Hydra magnipapillata]
Length = 175
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 125/182 (68%), Gaps = 11/182 (6%)
Query: 30 MYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVY 89
MYD FD+TYQATIGIDFLSKT+ + ++ + LQ+WDTAG ERFRSLIP+YIRD S AV VY
Sbjct: 1 MYDSFDSTYQATIGIDFLSKTLVVGEKKIHLQIWDTAGTERFRSLIPNYIRDLSAAVAVY 60
Query: 90 DVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFI 149
D+ + SF R I++VR ER DV+IVL GNKTDL +KR+VS+E+G +AKE GV F+
Sbjct: 61 DITSVSSFDQVERSIDDVRKER-SDVVIVLCGNKTDLTEKRRVSMEQGARRAKELGVTFM 119
Query: 150 ETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQ----QGGGC 205
E SAK G N+K LF IA+AL S++K+E +N+ + S TE+ C
Sbjct: 120 EASAKTGHNVKKLFLHIASALVNE---SNSKKEKSKPINI---IVSPHTEKYIDPDSSYC 173
Query: 206 AC 207
C
Sbjct: 174 GC 175
>gi|340507324|gb|EGR33304.1| ras small monomeric gtpase, putative [Ichthyophthirius multifiliis]
Length = 189
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 103/125 (82%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ KYKLVF+GDQSVGKTSII RF+YD F T Q T+GIDF++KT++L+++T+RLQLWDTA
Sbjct: 10 VKKYKLVFIGDQSVGKTSIINRFIYDNFVGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTA 69
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQERFRSLIPSYIRDS A++ YDV QSF N S+WIE V+ ERG +V+ +L+GNK DL
Sbjct: 70 GQERFRSLIPSYIRDSDAAILTYDVTKAQSFQNLSKWIEYVKEERGNEVLTILLGNKIDL 129
Query: 127 VDKRQ 131
+ RQ
Sbjct: 130 QENRQ 134
>gi|2865392|gb|AAC32735.1| GTP binding protein [Plasmodium falciparum]
Length = 116
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 97/110 (88%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KYKLVFLG+Q+VGKTSIITRFMYD FD YQ+TIGIDFLSKT+YL++ VRLQLWD
Sbjct: 7 SGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD 114
TAGQERFRSLIPSYIRDS+ A++VYD+ NRQSF NT++WI+++ ERG D
Sbjct: 67 TAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKD 116
>gi|340501713|gb|EGR28462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 585
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 126/199 (63%), Gaps = 12/199 (6%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S + K+K++FLGDQ VGK+ II RFMYD FD +T+G+DFL+KT++ D++VRLQL
Sbjct: 363 STTTRVKHKIIFLGDQQVGKSCIIERFMYDVFDEKSHSTVGVDFLAKTLHTGDKSVRLQL 422
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQERFRSLIPSY+RD++ A+IV+DV ++S N +WI++ + RG + VLV N
Sbjct: 423 WDTAGQERFRSLIPSYLRDANCAIIVFDVTTKESLDNIDKWIKDYKDNRGTEAYCVLVAN 482
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K DL R ++ E KA+ + + E SAK+G NI F++++ L ++
Sbjct: 483 KIDLKLSRVITTETAQQKAQSLNMPYYEVSAKSGENILETFKQVSTYLQQVQE------- 535
Query: 183 DMVDVNLKPTVNSSQTEQQ 201
N N SQ +QQ
Sbjct: 536 -----NHNQDKNESQQQQQ 549
>gi|429858023|gb|ELA32859.1| ras small monomeric GTPase [Colletotrichum gloeosporioides Nara
gc5]
Length = 151
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 118/172 (68%), Gaps = 24/172 (13%)
Query: 38 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSF 97
YQATIGIDFLSK + T+G LIPSYIRDSSVAV+VYD++N +SF
Sbjct: 2 YQATIGIDFLSKARFPT----------TSG------LIPSYIRDSSVAVLVYDISNAKSF 45
Query: 98 LNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGF 157
NT +WI++VR ERG DVIIVLVGNKTDL DKR+V+ ++G+ +AK+ +MF+ETSAK G
Sbjct: 46 QNTKKWIDDVRAERGNDVIIVLVGNKTDLNDKREVTTQQGEEEAKKNNLMFVETSAKLGH 105
Query: 158 NIKPLFRKIAAALPGMETLSSTKQ--EDMVDVNLKPTVNSSQTEQQGGGCAC 207
N+K LF++IA ALPGME + +Q M+DV P +S + GCAC
Sbjct: 106 NVKTLFKRIAQALPGMEGTDAAQQASSQMIDVKTTPAASSQE------GCAC 151
>gi|344252929|gb|EGW09033.1| Ras-related protein Rab-6A [Cricetulus griseus]
Length = 108
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 94/105 (89%)
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
VRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII
Sbjct: 1 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 60
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPL 162
+LVGNKTDL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K +
Sbjct: 61 MLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQV 105
>gi|281353162|gb|EFB28746.1| hypothetical protein PANDA_003355 [Ailuropoda melanoleuca]
Length = 105
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/105 (78%), Positives = 94/105 (89%)
Query: 58 VRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVII 117
VRLQLWDTAGQERFRSLIPSYIRDS+VAV+VYD+ N SF T++WI++VRTERG DVII
Sbjct: 1 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVII 60
Query: 118 VLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPL 162
+LVGNKTDL DKRQVSIEEG+ KAKE VMFIETSAKAG+N+K +
Sbjct: 61 MLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQV 105
>gi|55733645|emb|CAH93499.1| hypothetical protein [Pongo abelii]
Length = 129
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
Query: 76 PSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIE 135
PSYIRDS+VAV+VYD+ N SF TS+WI++VRTERG DVII+LVGNKTDL DKRQ++IE
Sbjct: 1 PSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIE 60
Query: 136 EGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKPTVNS 195
EG+ +AKE VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L
Sbjct: 61 EGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEP 120
Query: 196 SQTEQQGGGCAC 207
+E GGC+C
Sbjct: 121 PASE---GGCSC 129
>gi|254566325|ref|XP_002490273.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|238030069|emb|CAY67992.1| GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5
[Komagataella pastoris GS115]
gi|328350666|emb|CCA37066.1| Ras-related protein ORAB-1 [Komagataella pastoris CBS 7435]
Length = 206
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 134/203 (66%), Gaps = 9/203 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D FD ++TIG FL++T+ L++RT ++ ++WDT
Sbjct: 11 FAQFKLVLLGESAVGKSSIVHRFVTDSFDDLRESTIGAAFLTQTIQLDERTTIKFEIWDT 70
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ A++ YD+ S WI+E++ + D+++ LVGNK D
Sbjct: 71 AGQERYKSLAPMYYRNANCALVAYDITQESSLDRAKSWIQELQKQASADIVVALVGNKLD 130
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL-SSTKQEDM 184
L +R+VS +E A E G++F E SAK G IK +F IA+ LP E L S+TK+
Sbjct: 131 LEAERKVSTKEAKEYADELGLIFKEISAKTGEGIKDVFHSIASKLPVEEKLNSATKRRRN 190
Query: 185 VDVNLKPTVNSSQTEQQGGGCAC 207
+D+N +P+ N+ ++ C+C
Sbjct: 191 IDLN-RPSTNNQES------CSC 206
>gi|145535658|ref|XP_001453562.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834359|emb|CAI44524.1| rab_B51 [Paramecium tetraurelia]
gi|124421284|emb|CAK86165.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 123/193 (63%), Gaps = 12/193 (6%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K KLVFLG+ VGKTSII RF+ + FD Q T+GIDF+SK M ++ +T+RL LWDTAGQ
Sbjct: 8 KQKLVFLGNSFVGKTSIIERFVQNTFDPKSQPTVGIDFISKNMTIDGKTMRLLLWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERF SLIP Y+RD+ AVIV+DV +R SF + RW +EV+ RG + +IV++GNK D
Sbjct: 68 ERFHSLIPGYVRDAQCAVIVFDVTSRHSFESLDRWFKEVKQTRGNEALIVILGNKIDA-- 125
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
+R VS +E A + +++ E SAK G I+ +I ALP +L T+ +
Sbjct: 126 ERVVSADEAREYAIKKDILYYEVSAKTGKGIEEAMEQICLALPTEHSLLITQSQ------ 179
Query: 189 LKPTVNSSQTEQQ 201
VN SQ EQQ
Sbjct: 180 ----VNQSQFEQQ 188
>gi|385302406|gb|EIF46539.1| rab gtpase [Dekkera bruxellensis AWRI1499]
Length = 208
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 130/204 (63%), Gaps = 10/204 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLE-DRTVRLQLWDT 65
++KLV LG+ +VGK+SI+ RF+ D F+ ++TIG FL++T+ L+ D TV+ ++WDT
Sbjct: 12 FVQFKLVLLGESAVGKSSIVQRFVKDSFNDFKESTIGAAFLTQTIDLDSDTTVKFEIWDT 71
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER+RSL Y R++ A++VYD+ + S WI+E++ + +++I LVGNKTD
Sbjct: 72 AGQERYRSLASIYYRNAQSALVVYDITQKASLDKAKYWIKELQKQASNNIVIALVGNKTD 131
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST--KQED 183
L ++RQ+ EE A E G++F E SAK+G IK FR+IA +P ETL ++
Sbjct: 132 LEEERQIPTEEAQAFANEAGLLFFEVSAKSGKGIKDCFREIALKMPIEETLKRRRDRKRG 191
Query: 184 MVDVNLKPTVNSSQTEQQGGGCAC 207
VD+N +P+ N Q CAC
Sbjct: 192 TVDLNKRPSTNEQQ-------CAC 208
>gi|406604009|emb|CCH44471.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 208
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 125/199 (62%), Gaps = 4/199 (2%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + D+T++ ++WDTAGQER
Sbjct: 10 KLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCIIGDKTIKFEIWDTAGQER 69
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK- 129
F SL P Y R++ A++VYD+ SF+ WI+E+ + D+II LVGNK D+V++
Sbjct: 70 FASLAPMYYRNAQAALVVYDITKPASFIKARHWIKELHEQASKDIIIALVGNKLDVVEED 129
Query: 130 ---RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
R+V+ EEG+ A E G++F+ETSAK FN+K +F I +P E ++++ ++ D
Sbjct: 130 ESNRKVAYEEGETLANEEGLIFLETSAKTSFNVKEVFMNIGQKIPNPENVTASGEQGRND 189
Query: 187 VNLKPTVNSSQTEQQGGGC 205
+ VN+ E G C
Sbjct: 190 ARVDLNVNNDSVENNGCNC 208
>gi|123401208|ref|XP_001301812.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736246|gb|AAX97452.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121883039|gb|EAX88882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 122/199 (61%), Gaps = 11/199 (5%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K K+VFLG VGKTS++ R M D+F Y TIG+DF +K + ++ RTV LQ+WDTAGQ
Sbjct: 4 KCKVVFLGSAGVGKTSLLNRLMTDEFSNQYNTTIGVDFFTKPVQVQGRTVTLQIWDTAGQ 63
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERF+SL+PSYIRDSSVAVIVYDV++ +SF W E V ERG + VLVGNK DL
Sbjct: 64 ERFKSLMPSYIRDSSVAVIVYDVSDEKSFDEAQEWYETVMHERGNEAKCVLVGNKIDL-- 121
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
+R+V ++ D AK + IETSAK + LF+ I+ P ++ Q ++ +
Sbjct: 122 ERRVDLKHVDDFAKPRQMQTIETSAKTSSGVARLFKLISELAPD---VTKIPQVYVLPIE 178
Query: 189 LKPTVNSSQTEQQGGGCAC 207
KP EQ GC C
Sbjct: 179 PKP------IEQNREGCQC 191
>gi|157117083|ref|XP_001658691.1| rab5 [Aedes aegypti]
gi|108876182|gb|EAT40407.1| AAEL007845-PA [Aedes aegypti]
Length = 214
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ +
Sbjct: 17 ATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFE 76
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ SF W++E++ + +++I L G
Sbjct: 77 IWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAG 136
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DLV+KR V EE A E G++F+ETSAK N+ +F I LP E +
Sbjct: 137 NKADLVNKRMVDYEEAKQYADENGLLFMETSAKTAVNVNDIFLAIGKKLPKNEGAGQQQ- 195
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCA 206
N++PT N Q+ Q G C+
Sbjct: 196 ------NIRPTQN-EQSRQNSGCCS 213
>gi|169596668|ref|XP_001791758.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 132/214 (61%), Gaps = 14/214 (6%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQ 61
S S A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ +
Sbjct: 14 SGSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L G
Sbjct: 74 IWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAG 133
Query: 122 NKTDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GM 173
NK DLV DKR + + + A+E G++F ETSAK N++ LF IA LP G
Sbjct: 134 NKLDLVTESPDKRAIQTADAEQYAREAGLLFFETSAKTSENVRELFTAIAKKLPLDQAGP 193
Query: 174 ETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
L +Q VNL+P N +Q GGC C
Sbjct: 194 RNLRPGQQR--AGVNLRPEANQTQGP---GGCNC 222
>gi|405961918|gb|EKC27651.1| Ras-related protein Rab-5C [Crassostrea gigas]
Length = 213
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 126/208 (60%), Gaps = 11/208 (5%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 13 ATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPNIVIALAG 132
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK+DL KR V EE A+E ++F+ETSAK N+ +F IA LP K
Sbjct: 133 NKSDLAQKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLP--------KN 184
Query: 182 EDMVDVNLKP---TVNSSQTEQQGGGCA 206
E +P +NS QT+Q GGC
Sbjct: 185 EGGGPAPSRPGGVNLNSQQTQQSEGGCC 212
>gi|451852641|gb|EMD65936.1| hypothetical protein COCSADRAFT_198789 [Cochliobolus sativus
ND90Pr]
gi|451997104|gb|EMD89569.1| hypothetical protein COCHEDRAFT_1021897 [Cochliobolus
heterostrophus C5]
Length = 221
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 14/212 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++W
Sbjct: 15 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK
Sbjct: 75 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNK 134
Query: 124 TDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMET 175
DLV DKR +S + + A+E G++F ETSAK N+K LF IA LP G
Sbjct: 135 LDLVTESPDKRAISTADAEQYAREAGLLFFETSAKTSENVKELFTAIAKKLPIDQAGPRN 194
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
L +Q VNL+P N +Q GC C
Sbjct: 195 LRPGQQRP--GVNLRPEANQTQGP---AGCNC 221
>gi|401400583|ref|XP_003880812.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
gi|325115224|emb|CBZ50779.1| rab22a, member RAS oncogene family, related [Neospora caninum
Liverpool]
Length = 241
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 121/200 (60%), Gaps = 7/200 (3%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 43 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVDLGSCIVKFEIWDTAGQ 102
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRT-ERGGDVIIVLVGNKTDLV 127
ER+RSL P Y R ++ AV+VYD++NR SF W++E++T +V+I L GNK DL
Sbjct: 103 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQTVNDRSNVVIALAGNKEDLG 162
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
+RQV +E A E G++FIETSAK G N+ LF +IAAALP +++E
Sbjct: 163 AERQVPKQEAQQYADEHGILFIETSAKTGHNVNELFYEIAAALP------KSRKEHDPHA 216
Query: 188 NLKPTVNSSQTEQQGGGCAC 207
+ Q G CAC
Sbjct: 217 GFQLNKTQEQKSSSGSWCAC 236
>gi|330936207|ref|XP_003305289.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
gi|311317754|gb|EFQ86627.1| hypothetical protein PTT_18094 [Pyrenophora teres f. teres 0-1]
Length = 220
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 14/212 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++W
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIW 73
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNK 133
Query: 124 TDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMET 175
DLV DKR +S + + A+E G++F ETSAK N+K LF IA LP G
Sbjct: 134 LDLVTESPDKRAISTADAEQYAREAGLLFFETSAKTCENVKELFTAIAKKLPIDQAGPRN 193
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
L +Q VNL+P N +Q GC C
Sbjct: 194 LRPGQQRQ--GVNLRPEANQTQGP---AGCNC 220
>gi|312072937|ref|XP_003139294.1| Rab6A [Loa loa]
Length = 123
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/90 (85%), Positives = 86/90 (95%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANR 94
TAGQERFRSLIPSYIRDS+VAV+VYD+ ++
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITSQ 96
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 130/210 (61%), Gaps = 16/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR V + + A+E G++F ETSAK N++ LF IA LP G L
Sbjct: 135 LVTDSPDKRAVQAADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
S+ + V+L+P T Q GGC C
Sbjct: 195 SSARP---GVDLRP----ESTNTQAGGCNC 217
>gi|237839103|ref|XP_002368849.1| Rab 5 [Toxoplasma gondii ME49]
gi|211966513|gb|EEB01709.1| Rab 5 [Toxoplasma gondii ME49]
Length = 241
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 7/200 (3%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 44 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQ 103
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRT-ERGGDVIIVLVGNKTDLV 127
ER+RSL P Y R ++ AV+VYD++NR SF W++E+++ +V+I L GNK DL
Sbjct: 104 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLA 163
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
+RQV +E A E G++F+ETSAK G N+ LF +IAAALP T++E
Sbjct: 164 AERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALP------KTRKEHDPHA 217
Query: 188 NLKPTVNSSQTEQQGGGCAC 207
+ Q CAC
Sbjct: 218 GFQLNKTQEQKSSSSSWCAC 237
>gi|221502146|gb|EEE27890.1| RAB, putative [Toxoplasma gondii VEG]
Length = 241
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 7/200 (3%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 44 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQ 103
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRT-ERGGDVIIVLVGNKTDLV 127
ER+RSL P Y R ++ AV+VYD++NR SF W++E+++ +V+I L GNK DL
Sbjct: 104 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLA 163
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
+RQV +E A E G++F+ETSAK G N+ LF +IAAALP T++E
Sbjct: 164 AERQVPNQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALP------KTRKEHDPHA 217
Query: 188 NLKPTVNSSQTEQQGGGCAC 207
+ Q CAC
Sbjct: 218 GFQLNKTQEQKSSSSSWCAC 237
>gi|440295423|gb|ELP88336.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 197
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 118/177 (66%), Gaps = 5/177 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT---VRL 60
++P KYK+VF+GD SVGKT II RFM F Y+AT+G DF SK + +D+T V+L
Sbjct: 1 MNPTRKYKVVFIGDSSVGKTCIIGRFMSGMFVNEYEATVGTDFSSK-LVTDDKTKQTVQL 59
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q+WDTAGQE++ SLIPSYIR+S VAV+VYD+++R SF + WI V++E DV + LV
Sbjct: 60 QIWDTAGQEKYHSLIPSYIRESRVAVVVYDISDRDSFNDLDEWISLVKSEEKKDVFLFLV 119
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
GNK D + KR+V+ +E KA + ETSAK NI LF+ I L +E +S
Sbjct: 120 GNKND-IGKREVTQKEALDKADYYQCQSFETSAKENCNITELFKAITERLCSIEPIS 175
>gi|156407426|ref|XP_001641545.1| predicted protein [Nematostella vectensis]
gi|156228684|gb|EDO49482.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 127/207 (61%), Gaps = 7/207 (3%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A++ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 ATMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR V E+ A++ G++F+ETSAK N+ +F IA LP + +Q
Sbjct: 134 NKADLASKRMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIAKKLPKSDNTPGGQQ 193
Query: 182 EDMVD--VNLKPTVNSSQTEQQGGGCA 206
+ VNL+ T + Q GGC
Sbjct: 194 SSQRNQGVNLRET-----SPQHSGGCC 215
>gi|9988838|gb|AAG10794.1|AF296447_1 Rab5 [Toxoplasma gondii]
Length = 240
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 121/200 (60%), Gaps = 8/200 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD SVGK+ ++ RF D+F ++TIG F+++++ L V+ ++WDTAGQ
Sbjct: 44 HFKLVLLGDTSVGKSCLVVRFAKDEFYEYQESTIGAAFMTQSVNLGSCIVKFEIWDTAGQ 103
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRT-ERGGDVIIVLVGNKTDLV 127
ER+RSL P Y R ++ AV+VYD++NR SF W++E+++ +V+I L GNK DL
Sbjct: 104 ERYRSLAPMYYRGAAAAVVVYDISNRDSFQGAKSWVQELQSVNDRSNVVIALAGNKEDLA 163
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
+RQV +E A E G++F+ETSAK G N+ LF +IAAALP + K+ D
Sbjct: 164 AERQVPKQEAQQYADEHGILFLETSAKTGHNVNELFYEIAAALP-----KTRKEHDPPGF 218
Query: 188 NLKPTVNSSQTEQQGGGCAC 207
L T Q CAC
Sbjct: 219 QLNKT--QEQKSSSSSWCAC 236
>gi|223995249|ref|XP_002287308.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220976424|gb|EED94751.1| canine-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 193
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 120/192 (62%), Gaps = 5/192 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 5 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTA 64
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A++VYD+ N SF W++E++ DV+I + GNK DL
Sbjct: 65 GQERYRSLAPMYYRGAAAAIVVYDITNPDSFAGAKSWVKELQRRGDQDVVIAMAGNKADL 124
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+RQV EE + A+E G++ +ETSAK N+K LF +IA LP ST+Q D
Sbjct: 125 EARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLP-----KSTQQPDREA 179
Query: 187 VNLKPTVNSSQT 198
+ P S+
Sbjct: 180 FPIMPQKQESRN 191
>gi|170586196|ref|XP_001897865.1| Ras-related protein Rab-6B [Brugia malayi]
gi|158594260|gb|EDP32844.1| Ras-related protein Rab-6B, putative [Brugia malayi]
Length = 160
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/89 (86%), Positives = 85/89 (95%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 67 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 126
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVAN 93
TAGQERFRSLIPSYIRDS+VAV+VYD+ +
Sbjct: 127 TAGQERFRSLIPSYIRDSTVAVVVYDITS 155
>gi|443707017|gb|ELU02811.1| hypothetical protein CAPTEDRAFT_227582 [Capitella teleta]
Length = 210
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 123/202 (60%), Gaps = 7/202 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 15 SKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 74
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N+ +F W+ E++ + +++I L GNK
Sbjct: 75 TAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVRELQRQASPNIVIALAGNKA 134
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL +KR V EE A+E ++F+ETSAK N+ +F IA LP E + +Q
Sbjct: 135 DLANKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKNEQ-AGQQQSRQ 193
Query: 185 VDVNLKPTVNSSQTEQQGGGCA 206
V+L SQ Q GGC
Sbjct: 194 RGVDL------SQENQPSGGCC 209
>gi|350534828|ref|NP_001232399.1| putative RAB6A member RAS oncogene family variant 4 [Taeniopygia
guttata]
gi|197129907|gb|ACH46405.1| putative RAB6A member RAS oncogene family variant 4 [Taeniopygia
guttata]
Length = 135
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 85/90 (94%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRT+RLQLWD
Sbjct: 9 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 68
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANR 94
TAGQERFRSLIPSYIRDS+ AV+VYD+ +R
Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITSR 98
>gi|402594689|gb|EJW88615.1| GTP-binding protein ryh1 [Wuchereria bancrofti]
Length = 100
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/89 (86%), Positives = 85/89 (95%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+PL K+KLVFLG+QSVGKTS+ITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLWD
Sbjct: 7 NPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVAN 93
TAGQERFRSLIPSYIRDS+VAV+VYD+ +
Sbjct: 67 TAGQERFRSLIPSYIRDSTVAVVVYDITS 95
>gi|291001341|ref|XP_002683237.1| rab family small GTPase [Naegleria gruberi]
gi|284096866|gb|EFC50493.1| rab family small GTPase [Naegleria gruberi]
Length = 213
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 131/208 (62%), Gaps = 5/208 (2%)
Query: 3 SVSPLAK---YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVR 59
SV+P AK +KLV LG+ SVGK+S++ RF+ +F ++TIG FL++T+ L D V+
Sbjct: 5 SVNPNAKSVPFKLVLLGESSVGKSSLVLRFVRGQFFEYQESTIGAAFLTQTVPLGDTIVK 64
Query: 60 LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVL 119
++WDTAGQER++SL P Y R ++ A++VYD+ + SF W++E++ + +++I L
Sbjct: 65 FEIWDTAGQERYKSLAPMYYRGAAAAIVVYDITSADSFQRAKNWVKELQRQGTTNIVIAL 124
Query: 120 VGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
GNK DL DKRQV E A++ G++F+ETSAKA N+ LF IA LP ET ++
Sbjct: 125 AGNKVDLEDKRQVESAEAKSYAEDNGLLFMETSAKAATNVNELFVAIARKLPSKETDNNN 184
Query: 180 K-QEDMVDVNL-KPTVNSSQTEQQGGGC 205
D+ + KP + +Q+GG C
Sbjct: 185 NVNSDLTPAIIPKPGDQPPERKQKGGCC 212
>gi|123389208|ref|XP_001299687.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|72536122|gb|AAZ73169.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121880590|gb|EAX86757.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K+V +GD SVGKTSII +F+Y+ +QAT+GIDF SK + ++ + V++Q+WDTAGQE
Sbjct: 6 HKVVLVGDSSVGKTSIINQFIYESISDEHQATVGIDFFSKQIEVDGKVVKMQIWDTAGQE 65
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
+F SLIPSYIRDS+VAV VYD+ + +SF + RW + V + +V VGNKTDL D
Sbjct: 66 KFSSLIPSYIRDSTVAVFVYDITSEESFDHLERWTKLVS--DIANPSLVFVGNKTDLSDA 123
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQV IE ++E FIE SAKA NIK LF+ I A +P ++ K+ V
Sbjct: 124 RQVPIERLQNYSEEKKGKFIEVSAKAPTNIKELFQMI-AEIPPVDLPEPAKETTNVKAPA 182
Query: 190 KPTVNSSQTEQQGGGC 205
NS+ + GG C
Sbjct: 183 NLNANSNNNAKSGGCC 198
>gi|427786891|gb|JAA58897.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 218
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + ++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPSIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
KR V +EE ++E G++F+ETSAK N+ +F IA LP E +S
Sbjct: 139 ASKRAVELEEAQAYSEENGLLFMETSAKTAMNVNDIFLAIAKKLPKTEQGTSAVGGGASG 198
Query: 187 VNLKPTVNSSQTEQQGGGC 205
+ V+ S+ QQ GGC
Sbjct: 199 QGRR-GVDLSEHPQQSGGC 216
>gi|47086269|ref|NP_998050.1| ras-related protein Rab-5B [Danio rerio]
gi|42744592|gb|AAH66634.1| RAB5B, member RAS oncogene family [Danio rerio]
Length = 214
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
DKR V EE A++ G++F+ETSAK N+ LF IA +P +T + T
Sbjct: 138 ADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTDTQNPTHAARHRG 197
Query: 187 VNLK-PTVNSSQT 198
VNL+ P S+++
Sbjct: 198 VNLQDPDAQSTRS 210
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 131/210 (62%), Gaps = 16/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR V + + A+E G++F ETSAK N++ LF IA LP G L
Sbjct: 135 LVTDSPDKRAVQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
S + V+L+P S+ T Q GGC C
Sbjct: 195 SNPRP---GVDLRP--ESANT--QAGGCNC 217
>gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
gi|126093571|gb|ABN68260.1| Rab5-like GTPase [Scheffersomyces stipitis CBS 6054]
Length = 215
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 16/219 (7%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ +P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSFPNPATSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SF+ W++E+ + D+ I LV
Sbjct: 61 EIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQASKDITIALV 120
Query: 121 GNKTDLVDK-------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-- 171
GNK DLV+ R+VS+EEG G A+E G++F ETSAK +N+ +F I + +P
Sbjct: 121 GNKYDLVEDDTEEESLRKVSVEEGKGLAEEEGLLFFETSAKTSYNVNDVFIGIGSKIPEA 180
Query: 172 ---GMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
G + T + +D+ P + + G CAC
Sbjct: 181 ASAGPNQIHQTNNDGRIDLTSDP----NNRPRAAGDCAC 215
>gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3]
Length = 202
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 125/207 (60%), Gaps = 5/207 (2%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M +++ +K++F+GD SVGKTSII +++Y+ Y +TIGID+LSK + D+ ++L
Sbjct: 1 MKNITSTPFHKIIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYLSKIVNEADKPIQL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q+WDTAGQE+F SLIP+YIR S++AV+VYD+ +QSF N W + V + ++V
Sbjct: 61 QIWDTAGQEKFHSLIPAYIRSSTIAVLVYDITCKQSFDNIQTWYQMVI--NNAEPAFIIV 118
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNK+DL +R SIEEG A + FIETSA NI LF I +E ++ +
Sbjct: 119 GNKSDLDSERANSIEEGKKFANQINAKFIETSAITSENISQLFDIIIQIPIPVEEVAQEE 178
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
++ M+ + P+ Q GC C
Sbjct: 179 KQVMITI---PSDKMDTKAPQNNGCGC 202
>gi|170031849|ref|XP_001843796.1| rab5 [Culex quinquefasciatus]
gi|167871195|gb|EDS34578.1| rab5 [Culex quinquefasciatus]
Length = 215
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 126/205 (61%), Gaps = 8/205 (3%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ +
Sbjct: 18 ATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCIDDTTVKFE 77
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ SF W++E++ + +++I L G
Sbjct: 78 IWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFARAKTWVKELQRQASPNIVIALAG 137
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL + R V EE A + G++F+ETSAK N+ +F IA LP E +
Sbjct: 138 NKADLANSRVVDYEEAKQYADDNGLLFMETSAKTAVNVNDIFLAIAKKLPKNEGTGPQQ- 196
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCA 206
N++PT N Q+ Q G C+
Sbjct: 197 ------NIRPTQN-EQSRQNSGCCS 214
>gi|347841938|emb|CCD56510.1| similar to ras-related protein rab-5a [Botryotinia fuckeliana]
Length = 221
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 131/214 (61%), Gaps = 11/214 (5%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRL 60
A S A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+
Sbjct: 11 AGNSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKF 70
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L
Sbjct: 71 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALA 130
Query: 121 GNKTDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
GNK DLV DKR ++ E+ AKE G++F ETSAK N++ LF IA LP +
Sbjct: 131 GNKLDLVTEQPDKRAITTEDASNYAKEAGLLFFETSAKTSENVRELFTAIAKKLPLDQAG 190
Query: 177 SSTKQED---MVDVNLKPTVNSSQTEQQGGGCAC 207
+ V+L+P +Q G GCAC
Sbjct: 191 PRNPRAGGPRGTGVDLRPEAPGTQA---GPGCAC 221
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 130/210 (61%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR ++ + + AKE G++F ETSAK N+K LF IA LP G L
Sbjct: 135 LVTENPDKRAIATADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + V+L+P +Q GCAC
Sbjct: 195 TNTRP---GVDLRPEAAGTQG---ANGCAC 218
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 14/210 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
LV DKR VS + + A+E G++F ETSAK N++ LF IA LP ++ +
Sbjct: 137 LVTEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLP-LDQVGPRHA 195
Query: 182 EDMVDVNLKPTVNSSQTE----QQGGGCAC 207
+P VN + +E Q G CAC
Sbjct: 196 RP----GQRPGVNLTSSEGANTQTNGPCAC 221
>gi|340897464|gb|EGS17054.1| hypothetical protein CTHT_0073810 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 219
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP--GMETLSST 179
LV DKR V + + A+E G++F ETSAK N++ LF IA LP +
Sbjct: 135 LVADNPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIARKLPLDQVGPRGHA 194
Query: 180 KQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ V+L P S Q GG CAC
Sbjct: 195 RPGQRPGVSLAP---ESANTQVGGPCAC 219
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 130/210 (61%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR ++ + + AKE G++F ETSAK N+K LF IA LP G L
Sbjct: 135 LVTENPDKRAIATADAEAYAKEAGLLFFETSAKTNTNVKELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + V+L+P +Q GC+C
Sbjct: 195 TNARP---GVDLRPEAAGTQG---ANGCSC 218
>gi|219111761|ref|XP_002177632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410517|gb|EEC50446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 113/170 (66%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ L+D TV+ +
Sbjct: 8 AANARVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDDATVKFE 67
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+RSL P Y R +S A++VYD+ N SF W++E++ +V+I L G
Sbjct: 68 IWDTAGQERYRSLAPMYYRGASAAIVVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAG 127
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
NK DL +R V EE + A+E G++ +ETSAK N+K LF +IA LP
Sbjct: 128 NKADLETRRAVEFEEANAYAQENGILHLETSAKNANNVKSLFIEIAKTLP 177
>gi|148234775|ref|NP_001079817.1| muscle RAS oncogene homolog [Xenopus laevis]
gi|32766475|gb|AAH54969.1| MGC64433 protein [Xenopus laevis]
Length = 213
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ +
Sbjct: 12 AGQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFE 71
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L G
Sbjct: 72 IWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAG 131
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK+DL +KR V EE A++ G++F+ETSAK N+ LF IA +P + + T
Sbjct: 132 NKSDLAEKRMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHA 191
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGC 205
VN V+ S+ + + G C
Sbjct: 192 AHNRGVN----VHGSEQQPRSGCC 211
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 127/207 (61%), Gaps = 8/207 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR V E + A+E G++F ETSAK N++ LF IA LP +
Sbjct: 137 LVTEQPDKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKLPLDQAGPRHAR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P ++ Q G CAC
Sbjct: 197 PGRGAGVSLNPPEGANT--QTNGSCAC 221
>gi|145508972|ref|XP_001440430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834482|emb|CAI44559.1| rab_A51 [Paramecium tetraurelia]
gi|124407647|emb|CAK73033.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 118/193 (61%), Gaps = 12/193 (6%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K KLVFLG+ VGKTSII RF+ + FD Q T+GIDF+ K + ++ + +RL LWDTAGQ
Sbjct: 8 KQKLVFLGNSYVGKTSIIERFVSNTFDPKSQPTVGIDFIGKNITIDGKNMRLLLWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERF SLIP Y+RD+ A+IV+DV +R SF + RW EV+ RG + IV++GNK D
Sbjct: 68 ERFHSLIPGYVRDAQCAIIVFDVTSRHSFESLDRWFNEVKQTRGNEAAIVILGNKIDA-- 125
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
+R +S +E A + +++ E SAK G I+ +I ALP + T+ +
Sbjct: 126 ERVISSQEARDYAMKKDILYYEVSAKTGKGIEEAMEQICLALPADHSFLITQSQ------ 179
Query: 189 LKPTVNSSQTEQQ 201
VN SQ EQQ
Sbjct: 180 ----VNQSQFEQQ 188
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 130/207 (62%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLD 135
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTK 180
LV DKR V + + A+E G++F ETSAK N++ LF IA LP + T+
Sbjct: 136 LVAEQPDKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKLPLDQVGPRHTR 195
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P +++Q G CAC
Sbjct: 196 PGQRPGVSLAPEGSNTQV---AGPCAC 219
>gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980]
gi|154698553|gb|EDN98291.1| hypothetical protein SS1G_13149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 221
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 131/214 (61%), Gaps = 11/214 (5%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRL 60
A S A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+
Sbjct: 11 AGNSRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKF 70
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L
Sbjct: 71 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALA 130
Query: 121 GNKTDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
GNK DLV DKR ++ E+ A+E G++F ETSAK N++ LF IA LP +
Sbjct: 131 GNKLDLVTEQPDKRAITTEDASNYAREAGLLFFETSAKTSENVRELFTAIAKKLPLDQAG 190
Query: 177 SSTKQED---MVDVNLKPTVNSSQTEQQGGGCAC 207
+ V+L+P +Q G GCAC
Sbjct: 191 PRNPRAGGPRGTGVDLRPEAPGTQA---GPGCAC 221
>gi|348537690|ref|XP_003456326.1| PREDICTED: ras-related protein Rab-5B-like [Oreochromis niloticus]
Length = 216
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KR V EE A++ G++F+ETSAK N+ LF IA +P +T + T
Sbjct: 139 AEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKTDTQNPTHAARHRG 198
Query: 187 VNLK-PTVNSSQ 197
VNL+ P +S++
Sbjct: 199 VNLQDPDAHSTR 210
>gi|402470455|gb|EJW04677.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 194
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 114/162 (70%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
YKLV LG SVGK+S++ +++ +F+ ++TIG F +KT+ L+D V+ ++WDTAGQE
Sbjct: 11 YKLVVLGYYSVGKSSLVMKYVKREFNPNEESTIGAAFCAKTVQLKDCNVKYEIWDTAGQE 70
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
R+ SLIP Y R + VA+IVYD+ N QSF +W++E++ E+ D + VLVGNK+DL
Sbjct: 71 RYNSLIPMYYRGAQVALIVYDITNPQSFTCAKKWVDELKEEKPKDFLKVLVGNKSDLDAS 130
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
R++ E+G A++ G++F ETSAK G+N+ +F +A+ LP
Sbjct: 131 RKIHFEDGLNYAEQNGLLFYETSAKTGYNVDKIFEDVASILP 172
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 23/224 (10%)
Query: 1 MASVSP--------LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMY 52
MAS +P A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+
Sbjct: 1 MASRAPAGTRPGARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIS 60
Query: 53 L-EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTER 111
L E TV+ ++WDTAGQER++SL P Y R+++ AV+VYD+ S W++E++ +
Sbjct: 61 LDESTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQA 120
Query: 112 GGDVIIVLVGNKTDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
+++I L GNK DLV DKR + + + A+E G++F ETSAK N+K LF IA
Sbjct: 121 NENIVIALAGNKLDLVTEHPDKRAIPTADAEAYAREAGLLFFETSAKTSTNVKELFAAIA 180
Query: 168 AALP----GMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
LP G L +T + V+L+P +Q G C C
Sbjct: 181 KKLPLDQAGPRNLRTTPRP---GVDLRPEAPGTQG---AGACNC 218
>gi|327276980|ref|XP_003223244.1| PREDICTED: ras-related protein Rab-5B-like [Anolis carolinensis]
Length = 215
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 124/199 (62%), Gaps = 3/199 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+ S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ +
Sbjct: 13 SQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAG 132
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS---S 178
NK DL +KR V EE A + ++F+ETSAK N+ LF IA LP E S +
Sbjct: 133 NKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTGGA 192
Query: 179 TKQEDMVDVNLKPTVNSSQ 197
+ VD++ + N SQ
Sbjct: 193 MGRNRGVDLHEQSQQNKSQ 211
>gi|384499462|gb|EIE89953.1| hypothetical protein RO3G_14664 [Rhizopus delemar RA 99-880]
Length = 193
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 120/197 (60%), Gaps = 18/197 (9%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+SIIT+++ D F + TIG FL+K +EDR ++ +WDTAGQER
Sbjct: 15 KLVLLGDSSVGKSSIITKYVTDTFIEGREVTIGAAFLAKICSIEDRIIKFDIWDTAGQER 74
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
FRSL P Y R+++ A+IV+DV N SF RW++E+ DV+I LVGNK DL R
Sbjct: 75 FRSLAPMYYRNAAAAMIVFDVTNYNSFTGAKRWVDELPL----DVMIALVGNKIDLEQDR 130
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
QVS++E E +++IETSA+ G NI +F +IA +P L +TK + +N+K
Sbjct: 131 QVSVDEIKEYVAEKDLIYIETSARLGINIHHVFNEIAKNVP----LKTTKTQ---TINIK 183
Query: 191 PTVNSSQTEQQGGGCAC 207
Q CAC
Sbjct: 184 DN-------HQHHSCAC 193
>gi|313213264|emb|CBY37104.1| unnamed protein product [Oikopleura dioica]
gi|313226486|emb|CBY21631.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 123/198 (62%), Gaps = 8/198 (4%)
Query: 1 MASVSP----LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDR 56
MA+ P + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D
Sbjct: 1 MAAPRPATNKIIQFKLVLLGEAAVGKSSLVLRFVKGEFKDHQESTIGAAFLTQTVCLDDV 60
Query: 57 TVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVI 116
TV+ ++WDTAGQER+ SL P Y R + AV+VYD+ +F W++E+R + D++
Sbjct: 61 TVKFEIWDTAGQERYHSLAPMYYRGAQAAVVVYDIQCPDTFSRAQAWVKELRQQANQDIV 120
Query: 117 IVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
I L GNK DL KR++ EE + AKE ++F+ETSAK N+ LF +IA LP ++
Sbjct: 121 IALAGNKADLAAKREIETEEAEVYAKENNLLFMETSAKTALNVNDLFLQIAKKLPKKDSQ 180
Query: 177 SSTKQEDMVDVNLKPTVN 194
S +VNL + N
Sbjct: 181 SGAAS----NVNLGESSN 194
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTK 180
LV DKR + + AKE G++F ETSAK N++ LF +IA LP + +
Sbjct: 137 LVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLDQVGPRHAR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P ++Q GG CAC
Sbjct: 197 PGQRPGVSLAPEGANTQV---GGPCAC 220
>gi|429852674|gb|ELA27799.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 221
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 18 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 77
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 78 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 137
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR VS + + A+E G++F ETSAK N+K LF IA LP +
Sbjct: 138 LVNEQPDKRAVSTADAEAYAREAGLLFFETSAKTAENVKDLFTAIAKKLPLDQAGPRHAR 197
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L+P S G C+C
Sbjct: 198 PGQRQGVSLQPETPGSNVS---GPCSC 221
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 130/207 (62%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+D T V+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIGAAFLTQTISLDDNTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S +W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR ++ + + AKE G++F ETSAK N++ LF IA LP + +
Sbjct: 137 LVTAQPDKRAITTADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKLPLDQAGPRNPR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V L+P S+Q + G CAC
Sbjct: 197 SGGRGGVELRPENPSTQGQ---GPCAC 220
>gi|378725883|gb|EHY52342.1| GTP-binding protein ypt5 [Exophiala dermatitidis NIH/UT8656]
Length = 219
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 128/210 (60%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 135
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + AKE G++F ETSAK N++ LF IA LP G L
Sbjct: 136 LVNEHPDKRAIQTADAEAYAKEAGLLFFETSAKTATNVRELFTAIAKKLPLDQAGPRNLR 195
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
S + V+L+P S Q G C C
Sbjct: 196 SNPRP---GVDLRP---ESTGTQGAGNCQC 219
>gi|297816780|ref|XP_002876273.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322111|gb|EFH52532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAVIVYD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 93 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V E+G G A++ G+ FIETSAK NI LF +I LP
Sbjct: 153 EKREVPTEDGIGLAEKNGMFFIETSAKTADNINQLFEEIGKRLP 196
>gi|357627683|gb|EHJ77299.1| small GTP binding protein RAB5 [Danaus plexippus]
Length = 209
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 113/176 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 13 APQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ +F W++E++ + ++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAG 132
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
NK+DL KR V EE A E G++F+ETSAK N+ +F IA LP E S
Sbjct: 133 NKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSEVSS 188
>gi|449444622|ref|XP_004140073.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
gi|449490416|ref|XP_004158599.1| PREDICTED: ras-related protein RABF1-like [Cucumis sativus]
Length = 199
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 113/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + SF W++E++ D+I+ LVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALVGNKADLQ 150
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V++++G A++ G+ FIETSAK NI LF +IA LP
Sbjct: 151 EKRKVTVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLP 194
>gi|71896201|ref|NP_001025576.1| muscle RAS oncogene homolog isoform 2 [Xenopus (Silurana)
tropicalis]
gi|309243097|ref|NP_001184079.1| muscle RAS oncogene homolog isoform 1 [Xenopus (Silurana)
tropicalis]
gi|60552032|gb|AAH91014.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
gi|89272803|emb|CAJ82337.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115292132|gb|AAI21995.1| muscle RAS oncogene homolog [Xenopus (Silurana) tropicalis]
Length = 213
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 123/199 (61%), Gaps = 4/199 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L GNK+DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KR V EE A++ G++F+ETSAK N+ LF IA +P + + T
Sbjct: 137 AEKRMVEYEEAQAYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAARNRG 196
Query: 187 VNLKPTVNSSQTEQQGGGC 205
VN V S+ + + G C
Sbjct: 197 VN----VQGSEQQPRSGCC 211
>gi|387017972|gb|AFJ51104.1| ras-related protein Rab-5B-like [Crotalus adamanteus]
Length = 214
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 114/176 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+ S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ +
Sbjct: 13 SQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALAG 132
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS 177
NK DL +KR V EE A + ++F+ETSAK N+ LF IA LP E S
Sbjct: 133 NKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQS 188
>gi|261205984|ref|XP_002627729.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|239592788|gb|EEQ75369.1| GTP-binding protein ypt5 [Ajellomyces dermatitidis SLH14081]
gi|327350703|gb|EGE79560.1| Ypt5 protein [Ajellomyces dermatitidis ATCC 18188]
Length = 217
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 129/210 (61%), Gaps = 16/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + A+E G++F ETSAK+ N++ LF IA LP G L
Sbjct: 135 LVTDSPDKRAIQTADAEAYAREAGLLFFETSAKSSTNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
S + V+L+P Q GC+C
Sbjct: 195 SNPRP---GVDLRPEAAGP----QANGCSC 217
>gi|90079481|dbj|BAE89420.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 112/171 (65%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F+ W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFVRAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|25304086|gb|AAH40143.1| RAB5B protein, partial [Homo sapiens]
Length = 267
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 67 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 126
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 127 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 186
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 187 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 237
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLD 135
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTK 180
LV DKR + + + A+E G++F ETSAK N++ LF IA LP + +
Sbjct: 136 LVTEQPDKRAIETADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKLPLDQVGPRHAR 195
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P ++Q GG CAC
Sbjct: 196 PGQRPGVSLAPEGANTQV---GGPCAC 219
>gi|50550089|ref|XP_502517.1| YALI0D07128p [Yarrowia lipolytica]
gi|49648385|emb|CAG80705.1| YALI0D07128p [Yarrowia lipolytica CLIB122]
Length = 209
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 123/206 (59%), Gaps = 16/206 (7%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+S++ RF+ ++F + TIG FL++ DRT++ ++WDTAGQER
Sbjct: 11 KLVLLGEAAVGKSSLVLRFVSNEFQENKEPTIGAAFLTQKCNFPDRTIKFEIWDTAGQER 70
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD-- 128
F SL P Y R++ A++VYD+ QSF+ W+ E++++ +II LVGNK DLVD
Sbjct: 71 FASLAPMYYRNAQTALVVYDITKPQSFIKARHWVSELKSQASPGIIIALVGNKRDLVDDD 130
Query: 129 --KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-----LSSTKQ 181
R+V+ +EG A+E G++F ETSAK G N+K +F IA +P + L ++
Sbjct: 131 ESARKVAEDEGKQLAEEEGLLFFETSAKTGLNVKDVFMAIAQKIPEEQKAPSGGLRGAEE 190
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ VD+N S CAC
Sbjct: 191 DSRVDLN-------SAVAGPESSCAC 209
>gi|315434208|ref|NP_001186777.1| ras-related protein Rab-5B [Gallus gallus]
gi|326935660|ref|XP_003213886.1| PREDICTED: ras-related protein Rab-5B-like [Meleagris gallopavo]
gi|75571188|sp|Q5ZHW4.1|RAB5B_CHICK RecName: Full=Ras-related protein Rab-5B
gi|53136700|emb|CAG32679.1| hypothetical protein RCJMB04_32j11 [Gallus gallus]
Length = 215
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 122/197 (61%), Gaps = 3/197 (1%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST---K 180
DL KR V EE A + ++F+ETSAK N+ LF IA LP E S++
Sbjct: 135 ADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAG 194
Query: 181 QEDMVDVNLKPTVNSSQ 197
+ VD++ + N SQ
Sbjct: 195 RSRGVDLHEQTQQNKSQ 211
>gi|403273236|ref|XP_003928426.1| PREDICTED: ras-related protein Rab-5B-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 122/197 (61%), Gaps = 3/197 (1%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAHAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLS---STK 180
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E + +
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAC 194
Query: 181 QEDMVDVNLKPTVNSSQ 197
+ VD++ + N SQ
Sbjct: 195 RSQGVDLHEQSQQNKSQ 211
>gi|225713422|gb|ACO12557.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290462345|gb|ADD24220.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
gi|290561497|gb|ADD38149.1| Ras-related protein Rab-5C [Lepeophtheirus salmonis]
Length = 216
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 112/165 (67%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYDV N+ SF+ W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V EE A+E G++F+ETSAK N+ +F +IA LP
Sbjct: 139 NTKRLVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAKKLP 183
>gi|383854195|ref|XP_003702607.1| PREDICTED: ras-related protein Rab-5C-like [Megachile rotundata]
Length = 214
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F+ W++E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V EE A E G++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 124/197 (62%), Gaps = 2/197 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ LE++TV+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R + +IVYDV +R SF N +WI+E+ +V +LVGNK DLV K
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R V+ +EG A +G+ FIETSAK +N++ F +A + L++ + +
Sbjct: 129 RVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQLNNQNTKGVTQQG- 187
Query: 190 KPTVNSSQTEQQGGGCA 206
P + +Q +QGG CA
Sbjct: 188 -PKLAGAQPIRQGGCCA 203
>gi|308485680|ref|XP_003105038.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|308256983|gb|EFP00936.1| CRE-RAB-5 protein [Caenorhabditis remanei]
gi|341880645|gb|EGT36580.1| CBN-RAB-5 protein [Caenorhabditis brenneri]
gi|341900137|gb|EGT56072.1| hypothetical protein CAEBREN_25822 [Caenorhabditis brenneri]
Length = 209
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 124/198 (62%), Gaps = 8/198 (4%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTAG
Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAG 78
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N++SF W++E++ + ++++ L GNK D+
Sbjct: 79 QERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVA 138
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
+KR V EE + A++ ++F+ETSAK N+ +F IA LP + + E V
Sbjct: 139 NKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP----IGPAQGEPTGTV 194
Query: 188 NLKPTVNSSQTEQQGGGC 205
++ N Q +Q+G C
Sbjct: 195 DM----NQPQQQQKGSCC 208
>gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus]
gi|388498868|gb|AFK37500.1| unknown [Lotus japonicus]
Length = 200
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + +SF W++E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGNPDIVMALVGNKADLL 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V++++G A++ G+ FIETSAK NI LF +IA LP
Sbjct: 152 EKREVAVQDGIDYAEKNGMFFIETSAKTADNINELFEEIAKRLP 195
>gi|62740107|gb|AAH94134.1| Unknown (protein for MGC:115056) [Xenopus laevis]
Length = 213
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 123/199 (61%), Gaps = 4/199 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L GNK+DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KR V EE A++ G++F+ETSAK N+ LF IA +P + + T
Sbjct: 137 AEKRMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHGAHNRG 196
Query: 187 VNLKPTVNSSQTEQQGGGC 205
VN V S+ + + G C
Sbjct: 197 VN----VQGSEQQPRSGCC 211
>gi|17506899|ref|NP_492481.1| Protein RAB-5 [Caenorhabditis elegans]
gi|3876435|emb|CAB04205.1| Protein RAB-5 [Caenorhabditis elegans]
Length = 208
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 124/197 (62%), Gaps = 8/197 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTAGQ
Sbjct: 19 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 78
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R + A++VYD+ N++SF W++E++ + ++++ L GNK D+ +
Sbjct: 79 ERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVAN 138
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
KR V EE + A++ ++F+ETSAK N+ +F IA LP + + E V+
Sbjct: 139 KRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP----IGPAQGEPTGTVD 194
Query: 189 LKPTVNSSQTEQQGGGC 205
+ N Q +Q+G C
Sbjct: 195 M----NQPQQQQKGSCC 207
>gi|399163143|gb|AFP33147.1| rab-5, partial [Caenorhabditis elegans]
Length = 207
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 124/197 (62%), Gaps = 8/197 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTAGQ
Sbjct: 18 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 77
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R + A++VYD+ N++SF W++E++ + ++++ L GNK D+ +
Sbjct: 78 ERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVAN 137
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
KR V EE + A++ ++F+ETSAK N+ +F IA LP + + E V+
Sbjct: 138 KRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKLP----IGPAQGEPTGTVD 193
Query: 189 LKPTVNSSQTEQQGGGC 205
+ N Q +Q+G C
Sbjct: 194 M----NQPQQQQKGSCC 206
>gi|367007916|ref|XP_003688687.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
gi|357526997|emb|CCE66253.1| hypothetical protein TPHA_0P00950 [Tetrapisispora phaffii CBS 4417]
Length = 213
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 112/172 (65%), Gaps = 5/172 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S +A KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + ++D T++ ++WD
Sbjct: 3 SNVASVKLVLLGEAAVGKSSIVVRFVSNDFSENKEPTIGAAFLTQRVNIDDHTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ A+IVYDV QSF+ W++E+ + GD++I L GNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALIVYDVTKPQSFIKARHWVKELHEQASGDIVIALAGNKV 122
Query: 125 DLV-----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL+ ++R+V+ EEG A E ++F ETSAK G+N+ +F + +P
Sbjct: 123 DLIEENGENERKVATEEGQKLADEENLLFFETSAKTGYNVNEIFLAVGDKIP 174
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 129/210 (61%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + A+E G++F ETSAK N++ LF IA LP G +
Sbjct: 135 LVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLDQAGPRNMR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + V+L+P +Q+ GG C C
Sbjct: 195 TAPRP---GVDLRPEAPGTQS---GGACNC 218
>gi|119393795|gb|ABL74413.1| Rab5 [Anopheles gambiae]
Length = 213
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 124/204 (60%), Gaps = 9/204 (4%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ +
Sbjct: 17 ATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFE 76
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N SF W++E++ + +++I L G
Sbjct: 77 IWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAG 136
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL + R V EE A + ++F+ETSAK N+ +F IA LP E +
Sbjct: 137 NKADLANSRVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKLPKNEGAGPQQ- 195
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGC 205
N++PT N +T +Q GC
Sbjct: 196 ------NIRPTQN--ETNRQNSGC 211
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 128/210 (60%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + A+E G++F ETSAK N+K LF IA LP G L
Sbjct: 135 LVTESPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVKELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+T + V+L+P +Q G C C
Sbjct: 195 TTPRP---GVDLRPEAPGTQG---AGSCNC 218
>gi|355714962|gb|AES05178.1| RAB5B, member RAS oncoprotein family [Mustela putorius furo]
Length = 246
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 47 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 106
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 107 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 166
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 167 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 217
>gi|410896506|ref|XP_003961740.1| PREDICTED: ras-related protein Rab-5B-like [Takifugu rubripes]
Length = 216
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
++R V EE A++ G++F+ETSAK N+ LF IA +P +T + T
Sbjct: 139 AERRLVEFEEAQTYAEDTGLLFMETSAKTAMNVNDLFLAIAKKMPKTDTQNPTHAVRHRG 198
Query: 187 VNLK-PTVNSSQ 197
VNL+ P +S++
Sbjct: 199 VNLQDPDTHSTR 210
>gi|301760474|ref|XP_002916104.1| PREDICTED: ras-related protein Rab-5B-like [Ailuropoda melanoleuca]
gi|281353251|gb|EFB28835.1| hypothetical protein PANDA_004070 [Ailuropoda melanoleuca]
Length = 215
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|110590632|pdb|2HEI|A Chain A, Crystal Structure Of Human Rab5b In Complex With Gdp
gi|110590633|pdb|2HEI|B Chain B, Crystal Structure Of Human Rab5b In Complex With Gdp
Length = 179
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 112/172 (65%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++
Sbjct: 2 SASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEI 61
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GN
Sbjct: 62 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGN 121
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
K DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 122 KADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 173
>gi|402886385|ref|XP_003906610.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Papio anubis]
gi|402886387|ref|XP_003906611.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Papio anubis]
gi|355564343|gb|EHH20843.1| Ras-related protein Rab-5B [Macaca mulatta]
gi|355786201|gb|EHH66384.1| Ras-related protein Rab-5B [Macaca fascicularis]
gi|380787145|gb|AFE65448.1| ras-related protein Rab-5B isoform 1 [Macaca mulatta]
gi|383410993|gb|AFH28710.1| ras-related protein Rab-5B [Macaca mulatta]
gi|384940030|gb|AFI33620.1| ras-related protein Rab-5B [Macaca mulatta]
Length = 215
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 129/210 (61%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + A+E G++F ETSAK N++ LF IA LP G L
Sbjct: 135 LVTENPDKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+T + V+L+P + +Q G C C
Sbjct: 195 TTPRP---GVDLRPETSGTQG---AGACNC 218
>gi|449281648|gb|EMC88684.1| Ras-related protein Rab-5A [Columba livia]
Length = 215
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 112/172 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
+KR V +E A + ++F+ETSAK N+ +F IA LP E S+
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQSA 189
>gi|440635533|gb|ELR05452.1| rab family, other [Geomyces destructans 20631-21]
Length = 219
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 131/212 (61%), Gaps = 9/212 (4%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRL 60
A+ + A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+
Sbjct: 11 ANNARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDEATTVKF 70
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L
Sbjct: 71 EIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALA 130
Query: 121 GNKTDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMET 175
GNK DLV DKR + + + AKE G++F ETSAK N++ LF IA LP
Sbjct: 131 GNKLDLVTEQQDKRVIQTADAEAYAKEAGLLFFETSAKTSENVRELFTAIAKKLPLDQAG 190
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + V+L+P ++Q G GC+C
Sbjct: 191 PRNPRSGPRPGVDLRPEAANTQG---GAGCSC 219
>gi|84626822|gb|ABC59814.1| small GTPase Rab5b [Nicotiana tabacum]
Length = 200
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 113/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
K KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 KVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 92 QERYAALAPLYYRGAAVAVVVYDITSPESFAKAQYWVKELQKHGSPDIVMALVGNKADLH 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V+ ++G A++ G+ FIETSAK NI LF +IA LP
Sbjct: 152 EKREVTTQDGIDCAEKNGMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|339252708|ref|XP_003371577.1| GTP-binding protein Ypt5 [Trichinella spiralis]
gi|316968152|gb|EFV52478.1| GTP-binding protein Ypt5 [Trichinella spiralis]
Length = 232
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 124/203 (61%), Gaps = 8/203 (3%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF +F ++TIG FL++T+ ++D TV+ ++WDTAG
Sbjct: 34 CQFKLVLLGESAVGKSSLVLRFAKGQFHEFQESTIGAAFLTQTVCMDDMTVKFEIWDTAG 93
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER++SL P Y R + A++VYD+ N++SF W+ E++ + +++I L GNK DL
Sbjct: 94 QERYQSLAPMYYRAARAAIVVYDITNQKSFTKAKNWVNELQRQALPNIVIALAGNKADLA 153
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
R+V E A+E G++F+ETSAK N+ +F IA LP E S +
Sbjct: 154 SSRKVEFNEAQAYAEENGLLFMETSAKTAMNVNDIFWAIAKELPKTEAASGG-----LSG 208
Query: 188 NLKPTVNSSQTEQQGG---GCAC 207
K V+ S+++Q+GG G C
Sbjct: 209 AGKQVVDLSKSDQRGGTAMGSCC 231
>gi|440897250|gb|ELR48982.1| Ras-related protein Rab-5B, partial [Bos grunniens mutus]
Length = 227
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 27 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 86
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 87 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 146
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 147 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 197
>gi|417408967|gb|JAA51011.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 242
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 42 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 101
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 102 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 161
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 162 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 212
>gi|47213194|emb|CAF95985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++V+D+ ++ W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVFDITKPETLERAKAWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
++R V EE A+E G++F+ETSAK N+ LF IA +P +T + T
Sbjct: 139 AERRLVEFEEAQTYAEETGLLFMETSAKTAMNVNDLFLAIAKKMPKTDTQNPTHAVRHRG 198
Query: 187 VNLK-PTVNSSQ 197
VNL+ P +S++
Sbjct: 199 VNLQDPDTHSTR 210
>gi|387861356|gb|AFK08607.1| Rab GTPase [Litopenaeus vannamei]
Length = 210
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 125/199 (62%), Gaps = 6/199 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 16 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L GNK DL
Sbjct: 76 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKADL 135
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KR V EE A+E ++F+ETSAK N+ +F IA LP ++ +S D
Sbjct: 136 ANKRMVEYEEAQTYAEENSLLFMETSAKTAMNVNDIFLAIAKKLPKSDSTASGSPRG--D 193
Query: 187 VNLKPTVNSSQTEQQGGGC 205
V+L +++Q Q GC
Sbjct: 194 VSL----SNNQPAQGTAGC 208
>gi|323448788|gb|EGB04682.1| hypothetical protein AURANDRAFT_55091 [Aureococcus anophagefferens]
Length = 195
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 114/165 (69%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++++ LE+ TV+ ++WDTA
Sbjct: 6 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTA 65
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A++VYD+ N++SF W++E++ +VII L GNK DL
Sbjct: 66 GQERYRSLAPMYYRGAAAAIVVYDITNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL 125
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V EE ++E G++ +ETSAK ++K LF++IA LP
Sbjct: 126 QNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLP 170
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 121/186 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD++N+ SF +W++E++ + ++++ L GNK DL+D R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
+V+ EE A+E+G+ FIETSAK N+ +F +IA LP ++ + ++D +
Sbjct: 132 KVTAEEAQVYAQEYGLFFIETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPTE 191
Query: 191 PTVNSS 196
T ++S
Sbjct: 192 STASAS 197
>gi|225717846|gb|ACO14769.1| Ras-related protein Rab-5C [Caligus clemensi]
Length = 220
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 110/163 (67%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTAGQ
Sbjct: 25 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICLDDTTVKFEIWDTAGQ 84
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R + A++VYDV N+ SF W++E++ + +++I L GNK DL
Sbjct: 85 ERYHSLAPMYYRGAQAAIVVYDVTNQDSFTRAKNWVKELQRQASPNIVIALAGNKNDLTT 144
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V EE A+E G++F+ETSAK N+ +F +IA LP
Sbjct: 145 KRLVMYEEAQTYAEENGLLFMETSAKTALNVNDIFMEIAKKLP 187
>gi|149756750|ref|XP_001504847.1| PREDICTED: ras-related protein Rab-5B-like [Equus caballus]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|4506371|ref|NP_002859.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|28916687|ref|NP_803130.1| ras-related protein Rab-5B isoform 1 [Mus musculus]
gi|197099504|ref|NP_001125512.1| ras-related protein Rab-5B [Pongo abelii]
gi|354725902|ref|NP_001238965.1| ras-related protein Rab-5B isoform 1 [Homo sapiens]
gi|73968313|ref|XP_531627.2| PREDICTED: ras-related protein Rab-5B isoform 1 [Canis lupus
familiaris]
gi|291389411|ref|XP_002711110.1| PREDICTED: RAB5B, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|332207599|ref|XP_003252883.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Nomascus
leucogenys]
gi|332839019|ref|XP_003313654.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan troglodytes]
gi|344266193|ref|XP_003405165.1| PREDICTED: ras-related protein Rab-5B-like [Loxodonta africana]
gi|348580964|ref|XP_003476248.1| PREDICTED: ras-related protein Rab-5B-like [Cavia porcellus]
gi|390467774|ref|XP_002752642.2| PREDICTED: ras-related protein Rab-5B [Callithrix jacchus]
gi|397509152|ref|XP_003825000.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Pan paniscus]
gi|397509154|ref|XP_003825001.1| PREDICTED: ras-related protein Rab-5B isoform 2 [Pan paniscus]
gi|410046526|ref|XP_003952209.1| PREDICTED: ras-related protein Rab-5B [Pan troglodytes]
gi|410964757|ref|XP_003988919.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Felis catus]
gi|426224979|ref|XP_004006646.1| PREDICTED: ras-related protein Rab-5B isoform 1 [Ovis aries]
gi|46577637|sp|P61020.1|RAB5B_HUMAN RecName: Full=Ras-related protein Rab-5B
gi|48474314|sp|P61021.1|RAB5B_MOUSE RecName: Full=Ras-related protein Rab-5B
gi|75055067|sp|Q5RBG1.1|RAB5B_PONAB RecName: Full=Ras-related protein Rab-5B
gi|20379050|gb|AAM21085.1|AF498937_1 small GTP binding protein RAB5B [Homo sapiens]
gi|35839|emb|CAA38653.1| ras related protein Rab5b [Homo sapiens]
gi|871435|emb|CAA59016.1| rab5b [Mus musculus]
gi|26349073|dbj|BAC38176.1| unnamed protein product [Mus musculus]
gi|31873318|emb|CAD97650.1| hypothetical protein [Homo sapiens]
gi|45708723|gb|AAH32740.1| RAB5B protein [Homo sapiens]
gi|49456341|emb|CAG46491.1| RAB5B [Homo sapiens]
gi|55728309|emb|CAH90899.1| hypothetical protein [Pongo abelii]
gi|117645878|emb|CAL38406.1| hypothetical protein [synthetic construct]
gi|119617268|gb|EAW96862.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617269|gb|EAW96863.1| RAB5B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|127797687|gb|AAH50558.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798430|gb|AAH56422.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|127798643|gb|AAH65298.2| RAB5B, member RAS oncogene family [Homo sapiens]
gi|148692650|gb|EDL24597.1| RAB5B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|158258631|dbj|BAF85286.1| unnamed protein product [Homo sapiens]
gi|187952647|gb|AAI37575.1| RAB5B, member RAS oncogene family [Mus musculus]
gi|208967242|dbj|BAG73635.1| RAB5B, member RAS oncogene family [synthetic construct]
gi|223459814|gb|AAI37576.1| Rab5b protein [Mus musculus]
gi|410217062|gb|JAA05750.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410268074|gb|JAA22003.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410299464|gb|JAA28332.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|410340889|gb|JAA39391.1| RAB5B, member RAS oncogene family [Pan troglodytes]
gi|444518222|gb|ELV12033.1| Ras-related protein Rab-5B [Tupaia chinensis]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|189237939|ref|XP_001813105.1| PREDICTED: similar to small GTP binding protein RAB5 [Tribolium
castaneum]
gi|270008253|gb|EFA04701.1| Rab-protein 5 [Tribolium castaneum]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 113/172 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALAGNKQDL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
+KR V EE A E G++F+ETSAK N+ +F IA LP E ++
Sbjct: 139 ANKRMVEFEEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNEQATA 190
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 126/197 (63%), Gaps = 9/197 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++K+V LGD SVGK+SI+ R D++ + TIG FL+KT+ ++ T++ ++WDTAGQ
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R S+ A++VYD+ + SF+ +WI+E+R G + +I LVGNK DL D
Sbjct: 68 ERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGS-GNEAVIFLVGNKCDLAD 126
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
R ++ EE +G A+ + +IETSAKA N+ LF +IA LP E + ++D +
Sbjct: 127 SRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE-------KGLIDPD 179
Query: 189 LKPTVNSSQTEQQGGGC 205
+ +++++ E + G C
Sbjct: 180 -EVVISNNKNENKKGCC 195
>gi|112292957|dbj|BAF02856.1| Rab5B [Mus musculus]
Length = 229
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 29 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 88
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 89 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 148
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 149 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 199
>gi|329664122|ref|NP_001193120.1| ras-related protein Rab-5B [Bos taurus]
gi|296487563|tpg|DAA29676.1| TPA: RAB5B, member RAS oncogene family-like [Bos taurus]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|452988143|gb|EME87898.1| hypothetical protein MYCFIDRAFT_70384 [Pseudocercospora fijiensis
CIRAD86]
Length = 222
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 116/170 (68%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 14 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 73
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 74 AGQERYKSLAPMYYRNANCAVVVYDITQAASLEKAKAWVKELQRQANENIIIALAGNKAD 133
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR VS + + AKE G++F ETSAK N+K LF IA LP
Sbjct: 134 LVAEQPDKRAVSTADAEAYAKEAGLLFFETSAKTAENVKELFTAIAKKLP 183
>gi|121583768|ref|NP_001073405.1| ras-related protein Rab-5B [Rattus norvegicus]
gi|120537414|gb|AAI29102.1| RAB5B, member RAS oncogene family [Rattus norvegicus]
gi|149029654|gb|EDL84825.1| RAB5B, member RAS oncogene family (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|354488169|ref|XP_003506243.1| PREDICTED: ras-related protein Rab-5B-like [Cricetulus griseus]
gi|344256418|gb|EGW12522.1| Ras-related protein Rab-5B [Cricetulus griseus]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus]
Length = 215
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E+R + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELRRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 111/161 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IV+DV N+ SF +W++E++ + ++++ L GNK+DL+D R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ F+ETSAK N+K +F +IA LP
Sbjct: 132 KVTAEEAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172
>gi|60826707|gb|AAX36768.1| RAB5B member RAS oncogene family [synthetic construct]
Length = 216
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|298705900|emb|CBJ29030.1| Rab5, RAB family GTPase [Ectocarpus siliculosus]
Length = 195
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 126/199 (63%), Gaps = 9/199 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++ + L+D TV+ ++WDTA
Sbjct: 6 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTA 65
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A++VYDV N++SF W++E++ +VII L GNK DL
Sbjct: 66 GQERYRSLAPMYYRGAAAAIVVYDVTNKESFNGAKSWVKELQRRGDPNVIIALAGNKADL 125
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+RQV EE A++ G++ +ETSAK+ N+K +F +IA LP ++ + E
Sbjct: 126 EHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPK----ATVQPEREAF 181
Query: 187 VNLKPTVNSSQTEQQGGGC 205
++P +TEQ+ G C
Sbjct: 182 PIMRP-----RTEQKSGCC 195
>gi|340517201|gb|EGR47446.1| rab5-like GTPase [Trichoderma reesei QM6a]
Length = 220
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTK 180
LV DKR +S + + A+E G++F ETSAK N++ LF IA LP + +
Sbjct: 137 LVNEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQVGPRHAR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P S G C+C
Sbjct: 197 PGQRPGVSLAP---ESSNTNANGPCSC 220
>gi|395540530|ref|XP_003772206.1| PREDICTED: ras-related protein Rab-5B [Sarcophilus harrisii]
Length = 215
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|156553974|ref|XP_001602993.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Nasonia
vitripennis]
gi|345492181|ref|XP_003426794.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Nasonia
vitripennis]
gi|345492184|ref|XP_003426795.1| PREDICTED: ras-related protein Rab-5A-like isoform 3 [Nasonia
vitripennis]
Length = 213
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 112/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L++ TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F+ + W++E++ + ++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFMRATTWVKELQRQASPSIVIALAGNKADL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V EE A E G++F+ETSAK N+ +F IA LP E
Sbjct: 137 GNKRVVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 184
>gi|321476259|gb|EFX87220.1| hypothetical protein DAPPUDRAFT_230436 [Daphnia pulex]
Length = 227
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 113/170 (66%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 25 ATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 84
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L G
Sbjct: 85 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKVWVKELQRQASPNIVIALAG 144
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
NK DL KR V +E G A+E G++F+ETSAK N+ +F IA LP
Sbjct: 145 NKADLAAKRAVEFDEAKGYAEENGLLFMETSAKTAMNVNDIFLAIAKKLP 194
>gi|54020962|ref|NP_001005723.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49522606|gb|AAH75323.1| RAB5B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 123/199 (61%), Gaps = 3/199 (1%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+ S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ +
Sbjct: 13 SQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSG 132
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME---TLSS 178
NK DL KR V EE A + ++F+ETSAK N+ LF IA LP E T +
Sbjct: 133 NKADLTSKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKTEPQNTSGA 192
Query: 179 TKQEDMVDVNLKPTVNSSQ 197
+ VD++ + N SQ
Sbjct: 193 PGRSRGVDLHEQTQQNKSQ 211
>gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
gi|114192769|gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624]
Length = 218
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 130/210 (61%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ ++FD ++TIG FL++T+ L+D T V+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKNQFDDYRESTIGAAFLTQTISLDDSTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR +S + + A+E G++F ETSAK+ N+ LF IA LP G +
Sbjct: 135 LVTENPDKRAISTADAEAYAREAGLLFFETSAKSSTNVHELFTAIAKKLPLDQAGPRNMR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+T + V+L+P +Q G C C
Sbjct: 195 TTPRP---GVDLRPEAPGTQG---AGSCNC 218
>gi|351703636|gb|EHB06555.1| Ras-related protein Rab-5B [Heterocephalus glaber]
Length = 215
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVDYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|322712113|gb|EFZ03686.1| Rab5-like protein ypt5 [Metarhizium anisopliae ARSEF 23]
Length = 220
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AVIVYD+ S W++E++ + D+II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVIVYDITQSSSLDKAKAWVKELQRQAKEDIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR + + + A+E G++F ETSAK N++ LF IA LP T+
Sbjct: 137 LVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGPRHTR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P ++ G C+C
Sbjct: 197 PGQRPGVSLTPENANTNV---SGPCSC 220
>gi|145491373|ref|XP_001431686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398791|emb|CAK64288.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 128/216 (59%), Gaps = 17/216 (7%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+S + L +K + +GD SVGK+ ++ +F+ KF + TIG++F SKT+ + + ++L
Sbjct: 1 MSSYAYL--FKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKL 58
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q+WDTAGQE F+S+ SY R S A+IVYDV +R SF N SRW+EE ++ + +VLV
Sbjct: 59 QIWDTAGQESFKSITRSYYRGSICALIVYDVTSRDSFENISRWMEETKSYANDKITLVLV 118
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
NKTDL DKR +S EEG AK+ ++F+E SAK GF + +F++ A A+ L +
Sbjct: 119 ANKTDLSDKRVISAEEGQTFAKKHDLIFVEASAKTGFQVDKIFQEAAEAV-----LKKIE 173
Query: 181 QEDMVDVN----------LKPTVNSSQTEQQGGGCA 206
Q D+ N + + Q EQ+ C
Sbjct: 174 QRDIDATNESIGVRIGSQMTEEMIEKQKEQKASKCC 209
>gi|170587854|ref|XP_001898689.1| Ras-related protein Rab-5B [Brugia malayi]
gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative [Brugia malayi]
Length = 217
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 111/167 (66%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N++SF W++E++ + +++I L GNK
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNQESFAKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V EE A++ ++F+ETSAK N+ +F IA LP
Sbjct: 136 DLANKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLP 182
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 115/202 (56%), Gaps = 17/202 (8%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+V LGD VGKTSI+ RF FD Q T+G F+ K + D+T + Q+WDTAGQE+
Sbjct: 8 KVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWDTAGQEK 67
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+RSL P Y RD+ A+IVYD+ NR SF +W++E+R ++ I +VGNK DL+D+
Sbjct: 68 YRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQELREHGPANITIAVVGNKVDLIDRE 127
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN-L 189
V +E A E +F TSAK NI+ LF +IA ++E+ D+N
Sbjct: 128 DVKYDEAKQYANELNAIFQYTSAKENQNIESLFIQIA------------EKEEQKDINPT 175
Query: 190 KPTVNSSQTEQ----QGGGCAC 207
KP N Q QGGGC C
Sbjct: 176 KPQSNKGFQNQVQRPQGGGCNC 197
>gi|72165047|ref|XP_783878.1| PREDICTED: ras-related protein Rab-5B-like [Strongylocentrotus
purpuratus]
Length = 216
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 111/165 (67%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+++F W++E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNQETFGRAKTWVKELQRQASPNIVIALAGNKADL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR V EE A+E ++F+ETSAK N+ +F IA LP
Sbjct: 137 ANKRMVEFEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKKLP 181
>gi|431914002|gb|ELK15264.1| Ras-related protein Rab-5B [Pteropus alecto]
Length = 256
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 56 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 115
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 116 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 175
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 176 ADLANKRVVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 226
>gi|3153154|emb|CAA06922.1| small GTP-binding protein [Mesembryanthemum crystallinum]
Length = 201
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDR-TVRLQLWDTAG 67
K KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D TV+ ++WDTAG
Sbjct: 33 KVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSSTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + +SF W++E++ D+I+ LVGNK DL
Sbjct: 93 QERYAALAPLYYRGAAVAVIVYDITSPESFTKAQYWVKELQKHGSPDIIMALVGNKADLQ 152
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
++R+V ++G A++ G+ FIETSAK NI LF +IA LP
Sbjct: 153 ERREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 196
>gi|440292390|gb|ELP85595.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 202
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 120/208 (57%), Gaps = 22/208 (10%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
+S+ +A++K+ +GD SVGKT II RF FD +Y ATIG DF+++ M ++ + + LQ
Sbjct: 14 SSMEDIARFKIAVVGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQLMEVDSKKIELQ 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+RSLIP+YIR SSV +IVYDV +RQSF N WI EV + ++ LV
Sbjct: 74 IWDTAGQERYRSLIPNYIRGSSVVLIVYDVNDRQSFNNVDSWINEVPEKDS--TLVYLVA 131
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK D D+R V+ EEG K+ + FIETSA I LF IA L
Sbjct: 132 NKID-SDQRNVTKEEGMKKSYQLSSRFIETSALKDIGIADLFEDIATNLAP--------- 181
Query: 182 EDMVDVNLKPTVNS---SQTEQQGGGCA 206
LKP +N S E G GC
Sbjct: 182 -------LKPKINEDSLSIDETTGKGCC 202
>gi|260807647|ref|XP_002598620.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
gi|229283893|gb|EEN54632.1| hypothetical protein BRAFLDRAFT_118354 [Branchiostoma floridae]
Length = 213
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 121/202 (59%), Gaps = 6/202 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 16 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 75
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L GNK DL
Sbjct: 76 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQASPNIVIALSGNKADL 135
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST-KQEDMV 185
+KR V EE A++ ++F+ETSAK N+ +F IA LP E Q
Sbjct: 136 ANKRMVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKLPKNEPAGGAGNQAQGR 195
Query: 186 DVNLKPTVNSSQTEQQGGGCAC 207
V+LK T N QQ C
Sbjct: 196 RVDLKETGN-----QQASSTCC 212
>gi|388518999|gb|AFK47561.1| unknown [Medicago truncatula]
Length = 199
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 113/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVI YD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLQ 150
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V++E+G A++ G+ FIETSAK NI LF +IA LP
Sbjct: 151 EKREVAVEDGMDYAEKNGMFFIETSAKTADNINELFEEIAKRLP 194
>gi|335307623|ref|XP_003360910.1| PREDICTED: ras-related protein Rab-5B-like [Sus scrofa]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNTLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|224045361|ref|XP_002196933.1| PREDICTED: ras-related protein Rab-5A [Taeniopygia guttata]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 127/210 (60%), Gaps = 16/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + A+E G++F ETSAK+ N++ LF IA LP G L
Sbjct: 135 LVMDSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
S + V+L+P Q C+C
Sbjct: 195 SNPRP---GVDLRPEAAGP----QANNCSC 217
>gi|57530730|ref|NP_001006363.1| ras-related protein Rab-5A [Gallus gallus]
gi|53135109|emb|CAG32396.1| hypothetical protein RCJMB04_24h4 [Gallus gallus]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|326921972|ref|XP_003207227.1| PREDICTED: ras-related protein Rab-5A-like [Meleagris gallopavo]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella]
Length = 215
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 113/170 (66%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
++V + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 13 SAVGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQRQASPNIVIALSG 132
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
NK DL KR V EE A+E G++F+ETSAK N+ +F IA LP
Sbjct: 133 NKADLSSKRMVDYEEAQTYAEENGLLFMETSAKTAMNVNDIFLAIAKKLP 182
>gi|448114201|ref|XP_004202515.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359383383|emb|CCE79299.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 131/225 (58%), Gaps = 26/225 (11%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ S + KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSQASAVTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SF+ RW++E++ + D+ I LV
Sbjct: 61 EIWDTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALV 120
Query: 121 GNKTDLVDK--------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPG 172
GNK DLV+ R VSIEEG A+E G++F ETSAK N+ +F I +P
Sbjct: 121 GNKYDLVESDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIP- 179
Query: 173 METLSSTK----------QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
ETL+ST+ + +D++ P +++ + CAC
Sbjct: 180 -ETLTSTRPGTGATGSSGSDGRIDLSSTPNASTNDS------CAC 217
>gi|226372644|gb|ACO51947.1| Ras-related protein Rab-5B [Rana catesbeiana]
Length = 213
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGDMAVGKSSLVLRFVKGQFDEYQETTIGAAFLAQSVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L GNK+DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KR V EE A++ ++F+ETSAK N+ LF IA +P + + T
Sbjct: 137 AEKRMVEFEEAQAYAEDTSLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAARNRG 196
Query: 187 VNLKPTVNSSQTEQQGGGCA 206
VNL+ S + + G C+
Sbjct: 197 VNLQ----GSDQQPRSGCCS 212
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 126/197 (63%), Gaps = 9/197 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++K+V LGD SVGK+SI+ R D++ + TIG FL+KT+ ++ T++ ++WDTAGQ
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R S+ A++VYD+ + SF +WI+E+R G + II LVGNK DL D
Sbjct: 68 ERYHSLTPMYYRGSNAALVVYDITSDSSFTQAKKWIDELRGS-GNEAIIFLVGNKCDLAD 126
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
R ++ EE +G A+ + +IETSAKA N+ LF +IA LP E + ++D +
Sbjct: 127 SRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE-------KGLIDPD 179
Query: 189 LKPTVNSSQTEQQGGGC 205
+ +++++T+ + G C
Sbjct: 180 -EVLISNNKTDNKKGCC 195
>gi|407916415|gb|EKG09787.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 219
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 129/212 (60%), Gaps = 15/212 (7%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLW 63
S A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+D T V+ ++W
Sbjct: 14 SRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDNTTVKFEIW 73
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK
Sbjct: 74 DTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIVIALAGNK 133
Query: 124 TDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMET 175
DLV DKR + + + A+E G++F ETSAK N++ LF IA LP G
Sbjct: 134 LDLVTENPDKRAIPAADAEQYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGPRN 193
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ S + V+L+P S Q GC C
Sbjct: 194 IRSGPRP---GVDLRPEATSGQG---AAGCNC 219
>gi|321448228|gb|EFX61364.1| hypothetical protein DAPPUDRAFT_69789 [Daphnia pulex]
Length = 141
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 103/140 (73%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K+K+VF+GDQSVGK+SII RF+ ++FD+ + T+GIDF+SK + +++++VRLQLWDTAGQ
Sbjct: 1 KFKIVFIGDQSVGKSSIINRFIKNEFDSAHNPTVGIDFVSKNVTVKEKSVRLQLWDTAGQ 60
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ERFRSLIP Y+RDS +V+DV N SF N + W++ V+ RG DV IV++ NK D V+
Sbjct: 61 ERFRSLIPGYLRDSHAVFLVFDVTNADSFQNLNMWLDYVKENRGEDVAIVIIANKIDQVE 120
Query: 129 KRQVSIEEGDGKAKEFGVMF 148
+R VS + K K G +
Sbjct: 121 ERAVSSADAKEKLKYVGANY 140
>gi|17066210|emb|CAD12439.1| Rab5c GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 10/196 (5%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+RSL P Y R +S AVIVYD+ N++SF WI E+++ D+II L GNK DL + R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKNDLEEHR 148
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
V E + A ++FIETSAK G N+ LF +IA LP L +QE
Sbjct: 149 AVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP----LHKKEQEKC------ 198
Query: 191 PTVNSSQTEQQGGGCA 206
P + + TE+ C
Sbjct: 199 PAIQINNTEETKKKCC 214
>gi|440299778|gb|ELP92315.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 184
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 120/185 (64%), Gaps = 11/185 (5%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
++ + K+K+VFLGD SVGKT II RFM F+ Y++ + + +T++LQ+W
Sbjct: 1 MAAMMKHKIVFLGDSSVGKTCIIGRFMTGDFNNGYESLVCKN---------GKTIQLQIW 51
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+RSLIPSYIRDS+ AV+VYDV +RQ+F N SRW+++++ G++ + LVGNK
Sbjct: 52 DTAGQERYRSLIPSYIRDSAAAVVVYDVNDRQTFENVSRWVKDLKELEKGNIFVYLVGNK 111
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
D+ + R+V +E K +E ETSAK NI LF IA L + + + + +
Sbjct: 112 IDM-ETREVQQKEALAKGEELHCNCFETSAKTNINISELFASIAENLCTL-PIPADEHVE 169
Query: 184 MVDVN 188
+V+VN
Sbjct: 170 VVNVN 174
>gi|344229410|gb|EGV61296.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
gi|344229411|gb|EGV61297.1| hypothetical protein CANTEDRAFT_116954 [Candida tenuis ATCC 10573]
Length = 213
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 7/212 (3%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ +P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + D+T++
Sbjct: 1 MSFPNPAKAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDKTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SFL W++E+ + D+ I LV
Sbjct: 61 EIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFLKARHWVKELHEQASKDITIALV 120
Query: 121 GNKTDLVDK-------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
GNK DLV+ R+VS+EEG A++ G++F ETSAK +N+ +F I +P
Sbjct: 121 GNKYDLVEDENDGDTLRKVSVEEGQKLAEDEGLLFFETSAKTSYNVNEVFVGIGTKIPES 180
Query: 174 ETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGC 205
+ +Q + T ++ T QQ GC
Sbjct: 181 SAPTGVQQAGNEAGRIDLTTGAASTTQQTSGC 212
>gi|393909277|gb|EFO27359.2| Ras-like protein Rab-5A [Loa loa]
Length = 217
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 110/164 (67%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTAG
Sbjct: 19 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAG 78
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N++SF W++E++ + +++I L GNK DL
Sbjct: 79 QERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADLA 138
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR V EE A++ ++F+ETSAK N+ +F IA LP
Sbjct: 139 NKRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLP 182
>gi|255720040|ref|XP_002556300.1| KLTH0H09768p [Lachancea thermotolerans]
gi|238942266|emb|CAR30438.1| KLTH0H09768p [Lachancea thermotolerans CBS 6340]
Length = 229
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 130/202 (64%), Gaps = 12/202 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLE---DRTVRLQLW 63
+ ++KLV LGD SVGK+SI+ RF+ D FD ++TIG FLS+T+ LE D T++ ++W
Sbjct: 23 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDEFRESTIGAAFLSQTIKLEKHPDVTIKFEIW 82
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGG-DVIIVLVGN 122
DTAGQER++SL P Y R+++ A+IVYDV S + W+EE++ + G D++I L GN
Sbjct: 83 DTAGQERYKSLAPMYYRNANAALIVYDVTQPGSLVKAQSWVEELKNKVGDQDLVICLAGN 142
Query: 123 KTDLVDK----RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL---PGMET 175
K D+ D+ R+V E+ A+E G++F ETSAK G + +F++I + GME
Sbjct: 143 KVDICDEDATAREVQREDAQLYAQEQGLLFYETSAKTGAGVSAIFQEIGERVYQKKGMEV 202
Query: 176 LSSTKQEDMVDVNL-KPTVNSS 196
SST+ ++V L +P+ N S
Sbjct: 203 PSSTQARKPLNVELQRPSTNDS 224
>gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113693|gb|EDO15242.1| hypothetical protein Kpol_1029p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 211
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 6/209 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + ++D TV+ ++WD
Sbjct: 3 SNVTSVKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNIDDHTVKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYDV+ QSF+ W++E++ D+II L GNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDVSKPQSFIKARHWVKELQERASSDIIIALAGNKV 122
Query: 125 DLVD---KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP---GMETLSS 178
D+V+ +R+V+ EEG A E G++F ETSAK G N+ +F I +P E ++
Sbjct: 123 DIVEDGGERKVATEEGQKLADEEGLLFFETSAKTGQNVNEVFLAIGEKIPIKKPNEHANN 182
Query: 179 TKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ D N +S GC C
Sbjct: 183 ANADGSNDNNRVDITSSDNNAAAVSGCNC 211
>gi|380019933|ref|XP_003693855.1| PREDICTED: ras-related protein Rab-5C-like [Apis florea]
Length = 214
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F+ W++E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A E G++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRIVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|149634147|ref|XP_001508982.1| PREDICTED: ras-related protein Rab-5A-like [Ornithorhynchus
anatinus]
Length = 215
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|356576246|ref|XP_003556244.1| PREDICTED: ras-related protein RABF1 [Glycine max]
Length = 200
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + +SF W++E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLL 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V++++G A++ + FIETSAK NI LF +IA LP
Sbjct: 152 EKREVAVQDGTDYAEKNDMFFIETSAKTADNINELFEEIAKRLP 195
>gi|196000895|ref|XP_002110315.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
gi|190586266|gb|EDV26319.1| hypothetical protein TRIADDRAFT_22550 [Trichoplax adhaerens]
Length = 229
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 127/219 (57%), Gaps = 23/219 (10%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 16 SKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDVTVKFEIWD 75
Query: 65 TAGQE-------------RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTER 111
TAGQE R+ SL P Y R + A++VYD++N +SF W++E++ +
Sbjct: 76 TAGQENIFLILPSFCRYLRYHSLAPMYYRGAQTAIVVYDISNAESFQRAKAWVKELQRQA 135
Query: 112 GGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+++I L GNK DL +KR V +E A+E G++F+ETSAK N+ +F IA LP
Sbjct: 136 SPNIVIALAGNKADLANKRMVDADEAQVYAEENGLLFMETSAKTAMNVNEIFLAIAKKLP 195
Query: 172 GMETLSSTKQED----MVDVNLKPTVNSSQTEQQGGGCA 206
E +VD+N KP NS GGGC
Sbjct: 196 KSEQGGGGAATQGGARVVDIN-KPANNSG-----GGGCC 228
>gi|395540249|ref|XP_003772070.1| PREDICTED: ras-related protein Rab-5A [Sarcophilus harrisii]
Length = 215
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|198426781|ref|XP_002122313.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 217
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLQDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KR V ++ A+E G++F+ETSAK ++ +F IA LP E +S ++
Sbjct: 139 SNKRMVEHDDAVSYAEENGLLFMETSAKTAMHVNDIFLAIAEKLPKNEAGASANRQS-AG 197
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
V L T N ++G G +C
Sbjct: 198 VGLTATDN-----REGSGKSC 213
>gi|289743331|gb|ADD20413.1| Rab protein 5 [Glossina morsitans morsitans]
Length = 222
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 109/164 (66%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 30 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 89
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF + W++E+ + +++I L GNK DL
Sbjct: 90 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRATTWVKELHKQASPNIVIALAGNKADLS 149
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R V EE A+E G++F+ETSAK G N+ +F IA LP
Sbjct: 150 NIRVVEYEEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 193
>gi|294654743|ref|XP_456809.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
gi|199429115|emb|CAG84784.2| DEHA2A10956p [Debaryomyces hansenii CBS767]
Length = 221
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 126/225 (56%), Gaps = 22/225 (9%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ +P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + DRT++
Sbjct: 1 MSFPNPATSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF+SL P Y R++ A++VYD+ SF+ W++E+ + D+ I LV
Sbjct: 61 EIWDTAGQERFQSLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALV 120
Query: 121 GNKTDLVDK--------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP- 171
GNK DL + R+VSIEEG A+E G++F ETSAK+ +N+ +F I + +P
Sbjct: 121 GNKYDLAENDNENEESLRKVSIEEGKNLAEEEGLLFFETSAKSSYNVNDVFVGIGSKIPD 180
Query: 172 ---------GMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
G+ + E +D+ + S+ CAC
Sbjct: 181 TSANSGTASGLNVNGQSNNEGRIDL----SAGSNNNRGGADACAC 221
>gi|408400098|gb|EKJ79185.1| hypothetical protein FPSE_00660 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 116/170 (68%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIVIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR +S + + A+E G++F ETSAK N++ LF IA LP
Sbjct: 137 LVTEQPDKRAISTADAEAYAREAGLLFFETSAKTAENVQTLFTAIAKKLP 186
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 114/173 (65%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ NR +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK D+ +KR V ++E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADVANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|124505771|ref|XP_001350999.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
gi|23510642|emb|CAD49027.1| Rab5c, GTPase [Plasmodium falciparum 3D7]
Length = 214
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 10/196 (5%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+RSL P Y R +S AVIVYD+ N++SF WI E+++ D+II L GNK DL + R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKNDLEEHR 148
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
V E + A ++FIETSAK G N+ LF +IA LP L +QE
Sbjct: 149 AVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP----LHKKEQERC------ 198
Query: 191 PTVNSSQTEQQGGGCA 206
P + + TE+ C
Sbjct: 199 PAIQINNTEETKKKCC 214
>gi|391334640|ref|XP_003741710.1| PREDICTED: ras-related protein Rab-5C-like [Metaseiulus
occidentalis]
Length = 210
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 124/204 (60%), Gaps = 7/204 (3%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 13 ATAGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDLTNPDTFSRAKTWVKELQRQASPNIVIALAG 132
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK DL KR V E A E ++F+ETSAK N+ +F IA LP + ++ +Q
Sbjct: 133 NKADLASKRAVETAEAQAYADENQLLFMETSAKTATNVNDIFLAIAKKLPKND--AANQQ 190
Query: 182 EDMVDVNLKPTVNSSQTEQQGGGC 205
++V S+++ Q GG C
Sbjct: 191 GQRLNV-----AQSAESNQSGGCC 209
>gi|255718227|ref|XP_002555394.1| KLTH0G08206p [Lachancea thermotolerans]
gi|238936778|emb|CAR24957.1| KLTH0G08206p [Lachancea thermotolerans CBS 6340]
Length = 212
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 112/170 (65%), Gaps = 3/170 (1%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S L KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + D T++ ++WD
Sbjct: 3 SALTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNMGDHTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYDV QSF+ W++E+R + D+II LVGNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELREQASKDIIIALVGNKL 122
Query: 125 DLVD---KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
D+V+ +R+V++EE + A + G++F ETSAK G N+ +F I +P
Sbjct: 123 DMVETGAERKVALEEAENLASQEGLLFFETSAKTGSNVNEVFLAIGQKIP 172
>gi|49168452|emb|CAG38721.1| RAB5B [Homo sapiens]
Length = 215
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 111/171 (64%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + +++LV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFELVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
DL +KR V EE A + ++F+ETSAK N+ LF IA LP E
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|348562462|ref|XP_003467029.1| PREDICTED: ras-related protein Rab-5C-like [Cavia porcellus]
Length = 216
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 113/173 (65%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
AS + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 ASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +FL W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFLRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V ++ A++ ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQDAQAYAEDNSLLFMETSAKTAMNVNEVFMAIAKKLPKNE 186
>gi|145522440|ref|XP_001447064.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831433|emb|CAI39304.1| rab_A70 [Paramecium tetraurelia]
gi|124414564|emb|CAK79667.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 128/216 (59%), Gaps = 17/216 (7%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+S + L +K + +GD SVGK+ ++ +F+ KF + TIG++F SKT+ + + ++L
Sbjct: 1 MSSYAYL--FKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKL 58
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q+WDTAGQE F+S+ SY R S A+IVYDV +R SF N +RW+EE ++ + +VLV
Sbjct: 59 QIWDTAGQESFKSITRSYYRGSICALIVYDVTSRDSFENITRWMEETKSYANDKITLVLV 118
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
NKTDL DKR +S EEG AK+ ++F+E SAK GF + +F++ A A+ L +
Sbjct: 119 ANKTDLSDKRVISAEEGQTFAKKHDLIFVEASAKTGFQVDKIFQEAAEAV-----LKKIE 173
Query: 181 QEDMVDVN----------LKPTVNSSQTEQQGGGCA 206
Q D+ N + + Q EQQ C
Sbjct: 174 QRDIDATNESIGVRIGSQMTEEMVEKQKEQQKPKCC 209
>gi|190345894|gb|EDK37861.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 125/219 (57%), Gaps = 19/219 (8%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSFAPPTTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SF+ W++E+ + D+ I LV
Sbjct: 61 EIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALV 120
Query: 121 GNKTDLVDK---------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK DLV+ R+VSIEEG A E G++F ETSAK +N+ +F I + +P
Sbjct: 121 GNKHDLVEDDNDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIP 180
Query: 172 GMETLSSTKQEDMVD---VNLKPTVNSSQTEQQGGGCAC 207
E SS Q+ ++L S+ T GCAC
Sbjct: 181 --EAPSSKPQQPQATDGRIDL-----STGTAPAADGCAC 212
>gi|340718353|ref|XP_003397633.1| PREDICTED: ras-related protein Rab-5C-like [Bombus terrestris]
gi|350401655|ref|XP_003486219.1| PREDICTED: ras-related protein Rab-5C-like [Bombus impatiens]
Length = 214
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F+ W++E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFVRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A E G++F+ETSAK N+ +F IA LP E
Sbjct: 138 SNKRVVEFDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|178056558|ref|NP_001116652.1| ras-related protein Rab-5A [Sus scrofa]
gi|122131883|sp|Q06AU6.1|RAB5A_PIG RecName: Full=Ras-related protein Rab-5A
gi|115394760|gb|ABI97174.1| RAB5A [Sus scrofa]
Length = 215
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 126/197 (63%), Gaps = 9/197 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++K+V LGD SVGK+SI+ R D++ + TIG FL+KT+ ++ T++ ++WDTAGQ
Sbjct: 8 QFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDTAGQ 67
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R S+ A++VYD+ + SF+ +WI+E+R G + II LVGNK DL +
Sbjct: 68 ERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGS-GNEAIIFLVGNKCDLDN 126
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
R ++ EE +G A+ + +IETSAKA N+ LF +IA LP E + ++D +
Sbjct: 127 SRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKLPRNE-------KGLIDPD 179
Query: 189 LKPTVNSSQTEQQGGGC 205
+ +++++ E + G C
Sbjct: 180 -EVVISNNKNENKKGCC 195
>gi|312067383|ref|XP_003136717.1| Rab5 [Loa loa]
Length = 221
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 110/163 (67%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTAGQ
Sbjct: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 79
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R + A++VYD+ N++SF W++E++ + +++I L GNK DL +
Sbjct: 80 ERYHSLAPMYYRGAQAAIVVYDITNQESFTKAKNWVKELQRQASPNIVIALSGNKADLAN 139
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V EE A++ ++F+ETSAK N+ +F IA LP
Sbjct: 140 KRVVEYEEAQAYAEDNALLFMETSAKTAMNVNDIFLAIAKKLP 182
>gi|291237556|ref|XP_002738699.1| PREDICTED: RAB5B, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 215
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 110/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYDV N+ +F W++E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDVTNQDTFARAKTWVKELQRQASPNIVIALAGNKADL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR V EE A++ ++F+ETSAK N+ +F IA LP
Sbjct: 137 ANKRMVEYEEAQAYAEDNSLLFMETSAKTAMNVNDIFLAIAKKLP 181
>gi|18410144|ref|NP_567008.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75169988|sp|Q9CB01.1|RABF1_ARATH RecName: Full=Ras-related protein RABF1; Short=AtRABF1; AltName:
Full=Ras-related protein Ara-6; AltName:
Full=Ras-related protein Rab5C; Short=AtRab5C
gi|13160603|dbj|BAB32953.1| Ara6 [Arabidopsis thaliana]
gi|27754459|gb|AAO22677.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|28393957|gb|AAO42386.1| putative Rab family GTP-binding protein (Ara6) [Arabidopsis
thaliana]
gi|332645777|gb|AEE79298.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 202
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAVIVYD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 93 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V E+G A++ G+ FIETSAK NI LF +I LP
Sbjct: 153 EKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLP 196
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 121/186 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IV+DV N+ SF +W++E++ + ++++ L GNK+DL+D R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
+V+ E+ A+E G+ F+ETSAK N+K +F +IA LP ++ + + D +
Sbjct: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMD 191
Query: 191 PTVNSS 196
V+SS
Sbjct: 192 RAVSSS 197
>gi|406604593|emb|CCH43933.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 239
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 126/202 (62%), Gaps = 7/202 (3%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D FD ++TIG FL++T+ L+D T ++ ++WDT
Sbjct: 43 FAQFKLVLLGESAVGKSSVVHRFVKDSFDDFRESTIGAAFLTQTIQLDDTTTIKFEIWDT 102
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ A++VYD+ S W +E++ + D++I L GNK D
Sbjct: 103 AGQERYKSLAPMYYRNANAAIVVYDITQESSLERAKAWTKELQRQANQDIVIALAGNKVD 162
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK-QEDM 184
L +RQV E + A E G++F E SAK+G IK +F KIA LP L + Q
Sbjct: 163 LESQRQVPKEIAETFASEEGLLFFEVSAKSGEGIKEIFTKIAEKLPLESQLKPNRLQNKG 222
Query: 185 VDVNLKPTVNSSQTEQQGGGCA 206
VD+ +P+ N+ Q+ C+
Sbjct: 223 VDLQ-RPSTNN----QKNSCCS 239
>gi|13385374|ref|NP_080163.1| ras-related protein Rab-5A [Mus musculus]
gi|32171710|sp|Q9CQD1.1|RAB5A_MOUSE RecName: Full=Ras-related protein Rab-5A
gi|12842239|dbj|BAB25527.1| unnamed protein product [Mus musculus]
gi|12845986|dbj|BAB26985.1| unnamed protein product [Mus musculus]
gi|13436026|gb|AAH04842.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|21706419|gb|AAH34370.1| RAB5A, member RAS oncogene family [Mus musculus]
gi|26349503|dbj|BAC38391.1| unnamed protein product [Mus musculus]
gi|66396634|gb|AAH96481.1| Rab5a protein [Mus musculus]
gi|74139798|dbj|BAE31744.1| unnamed protein product [Mus musculus]
gi|74185181|dbj|BAE30082.1| unnamed protein product [Mus musculus]
gi|74198271|dbj|BAE35305.1| unnamed protein product [Mus musculus]
gi|74214066|dbj|BAE29448.1| unnamed protein product [Mus musculus]
gi|74219518|dbj|BAE29531.1| unnamed protein product [Mus musculus]
gi|112292955|dbj|BAF02855.1| Rab5A [Mus musculus]
gi|148691716|gb|EDL23663.1| RAB5A, member RAS oncogene family [Mus musculus]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|440896494|gb|ELR48410.1| Ras-related protein Rab-5A, partial [Bos grunniens mutus]
Length = 218
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 21 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 80
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 81 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 140
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 141 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSE 188
>gi|402222754|gb|EJU02820.1| GTP-binding protein RAB5 [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 114/173 (65%), Gaps = 1/173 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ LED TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVQLEDGTTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER++SL P Y R ++ A+ VYD+ S WI E++ + ++I L GNK+DL
Sbjct: 66 QERYKSLAPMYYRSAACAICVYDITQSASLEKAKSWIRELQRQADPSIVIALCGNKSDLA 125
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
+RQVS EE A+E G+M+ ETSAK G + +F +IA LP + L + +
Sbjct: 126 ARRQVSQEEAQKFAEEEGLMWCETSAKTGEGVNEIFDRIAHKLPEVAPLQAQR 178
>gi|297671900|ref|XP_002814060.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pongo abelii]
gi|332215304|ref|XP_003256781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Nomascus
leucogenys]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|168030601|ref|XP_001767811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680893|gb|EDQ67325.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 112/168 (66%), Gaps = 2/168 (1%)
Query: 12 LVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQER 70
LV LGD VGK+ I+ RF+ +FD + + T+G FLS+T+ L+D T V+ ++WDTAGQER
Sbjct: 5 LVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIWDTAGQER 64
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ AV+VYD+ N ++FL W++E++ D+++ LVGNK DL ++R
Sbjct: 65 YASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLENER 124
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLS 177
+VS E AK G+ FIETSAK N+ LF +IA LP G +LS
Sbjct: 125 EVSHAEAQAYAKSNGMFFIETSAKTSENVNQLFEEIAKRLPRGQSSLS 172
>gi|41393545|ref|NP_004574.2| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|41393614|ref|NP_958842.1| ras-related protein Rab-5C isoform a [Homo sapiens]
gi|197101217|ref|NP_001127529.1| ras-related protein Rab-5C [Pongo abelii]
gi|350539365|ref|NP_001233312.1| ras-related protein Rab-5C [Pan troglodytes]
gi|388454362|ref|NP_001253100.1| ras-related protein Rab-5C [Macaca mulatta]
gi|332260865|ref|XP_003279501.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Nomascus
leucogenys]
gi|332260867|ref|XP_003279502.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Nomascus
leucogenys]
gi|397485574|ref|XP_003813918.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Pan paniscus]
gi|397485576|ref|XP_003813919.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Pan paniscus]
gi|397485580|ref|XP_003813921.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Pan paniscus]
gi|426348253|ref|XP_004041752.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Gorilla gorilla
gorilla]
gi|426348259|ref|XP_004041755.1| PREDICTED: ras-related protein Rab-5C isoform 4 [Gorilla gorilla
gorilla]
gi|441677628|ref|XP_004092752.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|441677631|ref|XP_004092753.1| PREDICTED: ras-related protein Rab-5C [Nomascus leucogenys]
gi|38258923|sp|P51148.2|RAB5C_HUMAN RecName: Full=Ras-related protein Rab-5C; AltName: Full=L1880;
AltName: Full=RAB5L
gi|75054865|sp|Q5R7L7.1|RAB5C_PONAB RecName: Full=Ras-related protein Rab-5C
gi|7672665|gb|AAF66594.1|AF141304_1 small GTPase [Homo sapiens]
gi|20379052|gb|AAM21086.1|AF498938_1 small GTP binding protein RAB5C [Homo sapiens]
gi|49456757|emb|CAG46699.1| RAB5C [Homo sapiens]
gi|54695838|gb|AAV38291.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|55731054|emb|CAH92243.1| hypothetical protein [Pongo abelii]
gi|60822879|gb|AAX36624.1| RAB5C member RAS oncogene family [synthetic construct]
gi|61356072|gb|AAX41205.1| RAB5C member RAS oncogene family [synthetic construct]
gi|76779854|gb|AAI06040.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|109731489|gb|AAI14440.1| RAB5C, member RAS oncogene family [Homo sapiens]
gi|119581209|gb|EAW60805.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581210|gb|EAW60806.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119581211|gb|EAW60807.1| RAB5C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|190689983|gb|ACE86766.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|190691355|gb|ACE87452.1| RAB5C, member RAS oncogene family protein [synthetic construct]
gi|261860716|dbj|BAI46880.1| RAB5C, member RAS oncogene family [synthetic construct]
gi|343960018|dbj|BAK63863.1| ras-related protein Rab-5C [Pan troglodytes]
gi|355568697|gb|EHH24978.1| RAB5L [Macaca mulatta]
gi|355754177|gb|EHH58142.1| hypothetical protein EGM_07930 [Macaca fascicularis]
gi|380815232|gb|AFE79490.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|383411673|gb|AFH29050.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
gi|384941764|gb|AFI34487.1| ras-related protein Rab-5C isoform a [Macaca mulatta]
Length = 216
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 114/178 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E ++T
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 191
>gi|417408714|gb|JAA50897.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 137 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 184
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 111/161 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 73
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IV+DV N+ SF +W++E++ + ++++ L GNK+DL+D R
Sbjct: 74 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 133
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ E+ A+E G+ F+ETSAK N+K +F +IA LP
Sbjct: 134 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 174
>gi|115495947|ref|NP_001069654.1| ras-related protein Rab-5A [Bos taurus]
gi|344288083|ref|XP_003415780.1| PREDICTED: ras-related protein Rab-5A-like [Loxodonta africana]
gi|122144200|sp|Q0IIG7.1|RAB5A_BOVIN RecName: Full=Ras-related protein Rab-5A
gi|113911876|gb|AAI22652.1| RAB5A, member RAS oncogene family [Bos taurus]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|354721184|ref|NP_001238968.1| ras-related protein Rab-5C isoform b [Homo sapiens]
gi|397485578|ref|XP_003813920.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Pan paniscus]
Length = 249
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 114/178 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 47 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 106
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 107 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 166
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E ++T
Sbjct: 167 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 224
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 110/161 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ D+F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IV+D+ N+ SF +W++E++ + ++++ L GNK DL+D R
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+VS EE + A+E + F+ETSAK N+K +F +IA LP
Sbjct: 132 KVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLP 172
>gi|50979150|ref|NP_001003317.1| ras-related protein Rab-5A [Canis lupus familiaris]
gi|386781059|ref|NP_001248077.1| ras-related protein Rab-5A [Macaca mulatta]
gi|149729693|ref|XP_001495368.1| PREDICTED: ras-related protein Rab-5A-like [Equus caballus]
gi|296228179|ref|XP_002759690.1| PREDICTED: ras-related protein Rab-5A-like [Callithrix jacchus]
gi|301784142|ref|XP_002927485.1| PREDICTED: ras-related protein Rab-5A-like [Ailuropoda melanoleuca]
gi|395816586|ref|XP_003781781.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Otolemur
garnettii]
gi|402861674|ref|XP_003895210.1| PREDICTED: ras-related protein Rab-5A [Papio anubis]
gi|410971499|ref|XP_003992206.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Felis catus]
gi|131794|sp|P18066.1|RAB5A_CANFA RecName: Full=Ras-related protein Rab-5A
gi|47117089|sp|P61271.1|RAB5A_MACFA RecName: Full=Ras-related protein Rab-5A
gi|164056|gb|AAA30889.1| GTP-binding protein (rab5) [Canis lupus familiaris]
gi|14388408|dbj|BAB60752.1| hypothetical protein [Macaca fascicularis]
gi|281349668|gb|EFB25252.1| hypothetical protein PANDA_017269 [Ailuropoda melanoleuca]
gi|351700929|gb|EHB03848.1| Ras-related protein Rab-5A [Heterocephalus glaber]
gi|380787143|gb|AFE65447.1| ras-related protein Rab-5A [Macaca mulatta]
gi|383413157|gb|AFH29792.1| ras-related protein Rab-5A [Macaca mulatta]
gi|384941102|gb|AFI34156.1| ras-related protein Rab-5A [Macaca mulatta]
gi|431917016|gb|ELK16772.1| Ras-related protein Rab-5A [Pteropus alecto]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|19923262|ref|NP_004153.2| ras-related protein Rab-5A [Homo sapiens]
gi|426339659|ref|XP_004033761.1| PREDICTED: ras-related protein Rab-5A [Gorilla gorilla gorilla]
gi|1346958|sp|P20339.2|RAB5A_HUMAN RecName: Full=Ras-related protein Rab-5A
gi|20379048|gb|AAM21084.1|AF498936_1 small GTP binding protein RAB5A [Homo sapiens]
gi|27462979|gb|AAO15677.1|AF464088_1 cervical cancer oncogene 10 protein [Homo sapiens]
gi|12654847|gb|AAH01267.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|17390678|gb|AAH18288.1| RAB5A, member RAS oncogene family [Homo sapiens]
gi|49168472|emb|CAG38731.1| RAB5A [Homo sapiens]
gi|117644362|emb|CAL37675.1| hypothetical protein [synthetic construct]
gi|117644826|emb|CAL37879.1| hypothetical protein [synthetic construct]
gi|119584705|gb|EAW64301.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584706|gb|EAW64302.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119584707|gb|EAW64303.1| RAB5A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123981774|gb|ABM82716.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|123996593|gb|ABM85898.1| RAB5A, member RAS oncogene family [synthetic construct]
gi|189069166|dbj|BAG35504.1| unnamed protein product [Homo sapiens]
gi|261860476|dbj|BAI46760.1| RAB5A, member RAS oncogene family [synthetic construct]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|240849221|ref|NP_001155353.1| ras-related protein Rab-5A [Ovis aries]
gi|238566829|gb|ACR46638.1| RAB5A [Ovis aries]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|332260869|ref|XP_003279503.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Nomascus
leucogenys]
Length = 249
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 114/178 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 47 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 106
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 107 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 166
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E ++T
Sbjct: 167 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 224
>gi|114585675|ref|XP_516319.2| PREDICTED: ras-related protein Rab-5A [Pan troglodytes]
gi|397511743|ref|XP_003826226.1| PREDICTED: ras-related protein Rab-5A isoform 1 [Pan paniscus]
gi|410210354|gb|JAA02396.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410263980|gb|JAA19956.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410302036|gb|JAA29618.1| RAB5A, member RAS oncogene family [Pan troglodytes]
gi|410335267|gb|JAA36580.1| RAB5A, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|387017940|gb|AFJ51088.1| ras-related protein Rab-5A-like [Crotalus adamanteus]
Length = 215
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T++ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTIKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNE 185
>gi|355714960|gb|AES05177.1| RAB5A, member RAS oncoprotein family [Mustela putorius furo]
Length = 213
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 17 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 76
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 136
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 137 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 184
>gi|291399699|ref|XP_002716250.1| PREDICTED: RAB5A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 215
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|426348255|ref|XP_004041753.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Gorilla gorilla
gorilla]
Length = 249
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 114/178 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 47 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 106
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 107 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 166
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E ++T
Sbjct: 167 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 224
>gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus]
Length = 215
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|403304464|ref|XP_003942816.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Saimiri
boliviensis boliviensis]
gi|403304466|ref|XP_003942817.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Saimiri
boliviensis boliviensis]
gi|403304468|ref|XP_003942818.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
AS + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 ASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 122/197 (61%), Gaps = 2/197 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ LE++TV+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R + +IVYDV +R SF N +WI+E+ +V +LVGNK DLV K
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R V+ +EG A G+ FIETSAK +N++ F +A + ++S Q
Sbjct: 129 RVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVNS--QNTRGSAQQ 186
Query: 190 KPTVNSSQTEQQGGGCA 206
P + +Q +QGG C+
Sbjct: 187 GPKLAGAQPIRQGGCCS 203
>gi|354476585|ref|XP_003500505.1| PREDICTED: ras-related protein Rab-5A-like [Cricetulus griseus]
gi|344240325|gb|EGV96428.1| Ras-related protein Rab-5A [Cricetulus griseus]
Length = 215
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNE 185
>gi|221220906|gb|ACM09114.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL +KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis familiaris Rab5c protein, PIR
Accession Number S38625 [Homo sapiens]
gi|642532|gb|AAB08927.1| ras-related small GTP binding protein Rab5 [Homo sapiens]
Length = 216
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 114/178 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E ++T
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 191
>gi|344285066|ref|XP_003414284.1| PREDICTED: ras-related protein Rab-5C-like [Loxodonta africana]
Length = 216
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
AS + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 ASGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|348509081|ref|XP_003442080.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 220
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AASSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I + G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIAIAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL +KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|344303655|gb|EGW33904.1| hypothetical protein SPAPADRAFT_59281 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 127/218 (58%), Gaps = 12/218 (5%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ +P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSYPTPATSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SF+ W++E+ + D+ I LV
Sbjct: 61 EIWDTAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQAAKDITIALV 120
Query: 121 GNKTDLVDK-----------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAA 169
GNK DLV R+VS+EEG A E G++F ETSAK +N+ +F I
Sbjct: 121 GNKYDLVQDDDEGQGEREGVRKVSVEEGQNLAAEEGLLFYETSAKTSYNVNDVFIGIGNK 180
Query: 170 LPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+P +L+S+ +++ + + + N+S + C+C
Sbjct: 181 IPEAASLASSPEQNNNEGRIDLSTNASSNGNR-NLCSC 217
>gi|294899961|ref|XP_002776830.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239884031|gb|EER08646.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 232
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 110/160 (68%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
A +++ LGD +VGK+S++ RF ++FD+ + TIG+DF KT+ ++DR VRLQ+WDTAG
Sbjct: 22 ATARILVLGDSAVGKSSLLMRFCENRFDSNFVITIGVDFRVKTINIQDREVRLQIWDTAG 81
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QERFR++ P+Y R++ +++YD+ + +SF N W+ + V +LVGNK D+
Sbjct: 82 QERFRTITPAYYRNAMGVLLIYDMTDSKSFKNVDYWVRNLDEHADKTVQKLLVGNKADMA 141
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
KR+VS EEG A ++G+ F ETSAK+G N++ FR IA
Sbjct: 142 AKRKVSTEEGQALADKYGMTFFETSAKSGLNVEQAFRAIA 181
>gi|426348257|ref|XP_004041754.1| PREDICTED: ras-related protein Rab-5C isoform 3 [Gorilla gorilla
gorilla]
Length = 286
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 89 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 148
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L GNK DL
Sbjct: 149 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 208
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E A + ++F+ETSAK N+ +F IA LP E ++T
Sbjct: 209 ASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAT 261
>gi|126341423|ref|XP_001369723.1| PREDICTED: ras-related protein Rab-5A-like [Monodelphis domestica]
Length = 215
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ASKRAVDFQEAQSYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKNE 185
>gi|12083645|ref|NP_073183.1| ras-related protein Rab-5A [Rattus norvegicus]
gi|3309068|gb|AAC26004.1| small GTP-binding protein rab5 [Rattus norvegicus]
gi|149027113|gb|EDL82849.1| RAB5A, member RAS oncogene family [Rattus norvegicus]
gi|171847366|gb|AAI61848.1| Rab5a protein [Rattus norvegicus]
Length = 215
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|307203579|gb|EFN82612.1| Ras-related protein Rab-5C [Harpegnathos saltator]
Length = 214
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A E G++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|291406117|ref|XP_002719438.1| PREDICTED: RAB5C, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 216
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 113/178 (63%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E S+
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQSAA 191
>gi|307189232|gb|EFN73680.1| Ras-related protein Rab-5C [Camponotus floridanus]
gi|322784961|gb|EFZ11732.1| hypothetical protein SINV_10350 [Solenopsis invicta]
Length = 214
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A E G++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|213513268|ref|NP_001133617.1| Ras-related protein Rab-5A [Salmo salar]
gi|197631797|gb|ACH70622.1| member RAS oncogene family [Salmo salar]
gi|209154698|gb|ACI33581.1| Ras-related protein Rab-5A [Salmo salar]
Length = 216
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 112/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
++++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N++SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR + ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEMFMAIAKKLPKNE 186
>gi|348511330|ref|XP_003443197.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 119/184 (64%), Gaps = 3/184 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF+ W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME---TLSSTKQED 183
+KR + ++ A + ++F+ETSAK N+ +F IA LP E T +ST +
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQATGASTGRNR 198
Query: 184 MVDV 187
VD+
Sbjct: 199 GVDL 202
>gi|225707110|gb|ACO09401.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 219
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL +KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family, a [Danio rerio]
gi|28838709|gb|AAH47803.1| RAB5A, member RAS oncogene family [Danio rerio]
gi|39645921|gb|AAH63966.1| Rab5a protein [Danio rerio]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSE 186
>gi|327274891|ref|XP_003222209.1| PREDICTED: ras-related protein Rab-5A-like isoform 1 [Anolis
carolinensis]
gi|327274893|ref|XP_003222210.1| PREDICTED: ras-related protein Rab-5A-like isoform 2 [Anolis
carolinensis]
Length = 215
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|209147261|gb|ACI32882.1| Ras-related protein Rab-5C [Salmo salar]
Length = 219
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AANNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL +KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|182889996|gb|AAI65915.1| Rab5a protein [Danio rerio]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKSE 186
>gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703418|gb|AAH80959.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267359|emb|CAJ83124.1| RAB5A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTE 186
>gi|302927547|ref|XP_003054520.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735461|gb|EEU48807.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 220
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR + + + A+E G++F ETSAK N+ LF IA LP +
Sbjct: 137 LVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVANLFTAIAKKLPLDQAGPRHAR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P +++ G CAC
Sbjct: 197 PGQRPGVSLAPENSNTNI---SGPCAC 220
>gi|77736431|ref|NP_001029915.1| ras-related protein Rab-5C [Bos taurus]
gi|346716331|ref|NP_001231183.1| ras-related protein Rab-5C [Sus scrofa]
gi|410981133|ref|XP_003996927.1| PREDICTED: ras-related protein Rab-5C [Felis catus]
gi|426238047|ref|XP_004012969.1| PREDICTED: ras-related protein Rab-5C [Ovis aries]
gi|75052596|sp|Q58DS9.1|RAB5C_BOVIN RecName: Full=Ras-related protein Rab-5C
gi|61553191|gb|AAX46365.1| RAB5C, member RAS oncogene family isoform b [Bos taurus]
gi|109659170|gb|AAI18227.1| RAB5C, member RAS oncogene family [Bos taurus]
gi|296476370|tpg|DAA18485.1| TPA: ras-related protein Rab-5C [Bos taurus]
gi|440903244|gb|ELR53931.1| Ras-related protein Rab-5C [Bos grunniens mutus]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A++ ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|332017090|gb|EGI57889.1| Ras-related protein Rab-5C [Acromyrmex echinatior]
Length = 214
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFSRAQTWVKELQRQASPSIVIALAGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A E G++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRVVEYDEAQTYADENGLLFMETSAKTAMNVNDIFLAIAKKLPKNE 185
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR + + AKE G++F ETSAK N++ LF +IA LP
Sbjct: 137 LVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLP 186
>gi|358390924|gb|EHK40329.1| hypothetical protein TRIATDRAFT_132347 [Trichoderma atroviride IMI
206040]
Length = 220
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR + + + A+E G++F ETSAK N++ LF IA LP +
Sbjct: 137 LVNEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLPLDQAGPRHAR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P +++ G C+C
Sbjct: 197 PGQRPGVSLAPENSNTNV---NGPCSC 220
>gi|241959174|ref|XP_002422306.1| GTP-binding protein, putative; vacuolar protein sorting-associated
protein, putative; vacuolar protein-targeting protein,
putative [Candida dubliniensis CD36]
gi|223645651|emb|CAX40312.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 119/210 (56%), Gaps = 9/210 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ ++WD
Sbjct: 6 APATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ AV+VYD+ SF+ W++E+ + D+ I LVGNK
Sbjct: 66 TAGQERFASLAPMYYRNAQAAVVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKL 125
Query: 125 DLVDK---------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
DLV+ R+VSIEEG A E G++F ETSAK G N+ +F I + +P +
Sbjct: 126 DLVEDDSAEDGETLRKVSIEEGQTLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSVTV 185
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGC 205
S QE + T N+ + C
Sbjct: 186 AGSEAQESSNGRRIDLTANTDDSNATRSTC 215
>gi|146420668|ref|XP_001486288.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 212
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 124/218 (56%), Gaps = 17/218 (7%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSFAPPTTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SF+ W++E+ + D+ I LV
Sbjct: 61 EIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQASKDITIALV 120
Query: 121 GNKTDLVDK---------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK DLV+ R+VSIEEG A E G++F ETSAK +N+ +F I + +P
Sbjct: 121 GNKHDLVEDDNDGDDSSLRKVSIEEGQKLADEEGLLFFETSAKTAYNVNEVFVGIGSKIP 180
Query: 172 GMETLSSTKQEDMVD--VNLKPTVNSSQTEQQGGGCAC 207
L +Q D ++L S+ T GCAC
Sbjct: 181 EAPLLKP-QQPQATDGRIDL-----STGTAPAADGCAC 212
>gi|254573032|ref|XP_002493625.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|238033424|emb|CAY71446.1| GTPase required for transport during endocytosis and for correct
sorting of vacuolar hydrolases [Komagataella pastoris
GS115]
gi|328354547|emb|CCA40944.1| Ras-like GTP-binding protein YPT1 [Komagataella pastoris CBS 7435]
Length = 218
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 127/223 (56%), Gaps = 21/223 (9%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+S + KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + D+T++
Sbjct: 1 MSSNKQITAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQRCTIGDKTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF+SL P Y R++ A++VYDV +SF+ W+ E+ + ++II L
Sbjct: 61 EIWDTAGQERFQSLAPMYYRNAQAALVVYDVTKPKSFIKARHWVNELHEQASKNIIIALC 120
Query: 121 GNKTDLVD----------------KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFR 164
GNK D+V+ KR+VS++EG A + G++F ETSAK GFN+ +F
Sbjct: 121 GNKYDIVESEDNDVSTENEDDDSRKRKVSVQEGQTLADDEGLLFFETSAKTGFNVNEVFT 180
Query: 165 KIAAALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
I +P E SS V+L ++SS TE C C
Sbjct: 181 TIGKHIP--EATSSENAAGQERVDLTNRLDSSSTE---STCQC 218
>gi|427784137|gb|JAA57520.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 191
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 115/184 (62%), Gaps = 4/184 (2%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+ LGD VGK+SI+ RF+Y+ F+++ ++TIG F+ K + L DRT + +WDTAGQER
Sbjct: 8 KVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKFNIWDTAGQER 67
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+R+L P Y R + AVIVYD+ + +SF W+ E++ ++++ + GNK DL D R
Sbjct: 68 YRALAPMYYRGAGAAVIVYDITSMESFNAVQSWVRELQLHGDPNIVLGIAGNKCDLEDHR 127
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
+VS+ G+ A + G +F+ETSA NI+ LF IA +P ++ ++ + +NLK
Sbjct: 128 EVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKVP----VAQGVRQPELKLNLK 183
Query: 191 PTVN 194
N
Sbjct: 184 KNAN 187
>gi|225448984|ref|XP_002270699.1| PREDICTED: ras-related protein RABF1 [Vitis vinifera]
gi|147864853|emb|CAN79376.1| hypothetical protein VITISV_009584 [Vitis vinifera]
gi|296085986|emb|CBI31427.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAV+VYD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 92 QERYAALAPLYYRGAAVAVVVYDITSPESFNKAQYWVKELQKHGSPDIVMALVGNKADLH 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R+V +++G A++ G+ FIETSAK NI LF +IA LP
Sbjct: 152 ENREVPVQDGIDYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|317419436|emb|CBN81473.1| Ras-related protein Rab-5C [Dicentrarchus labrax]
Length = 221
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 15 AVANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFE 74
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 75 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 134
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK D+ +KR V ++E A + ++F+ETSAK N+ +F IA LP + + Q
Sbjct: 135 NKADIANKRAVELQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNDPQAGAGQ 194
Query: 182 --EDMVDVNLKPTVNSSQTEQQGGG 204
V+L+ S++ Q GG
Sbjct: 195 GGRTRTGVDLQEAAPQSRSSQCCGG 219
>gi|432883290|ref|XP_004074250.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVEFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSE 186
>gi|20072723|gb|AAH27378.1| Rab5c protein, partial [Mus musculus]
Length = 203
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 1 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 60
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 61 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 120
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 121 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 173
>gi|41393159|ref|NP_958909.1| ras-related protein Rab-5C [Danio rerio]
gi|28277724|gb|AAH45466.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|41351014|gb|AAH65634.1| RAB5C, member RAS oncogene family [Danio rerio]
gi|182891710|gb|AAI65047.1| Rab5c protein [Danio rerio]
Length = 221
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 121/200 (60%), Gaps = 2/200 (1%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 20 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTA 79
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L GNK DL
Sbjct: 80 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 139
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQEDM 184
+KR V +E A + ++F+ETSAK N+ +F IA LP E + +
Sbjct: 140 ANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGGAGSGGRAR 199
Query: 185 VDVNLKPTVNSSQTEQQGGG 204
V+L+ T ++ Q GG
Sbjct: 200 GGVDLQETAPQGRSGQCCGG 219
>gi|225556792|gb|EEH05080.1| GTP-binding protein ypt5 [Ajellomyces capsulatus G186AR]
gi|240281654|gb|EER45157.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325087805|gb|EGC41115.1| GTP-binding protein ypt5 [Ajellomyces capsulatus H88]
Length = 217
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 127/210 (60%), Gaps = 16/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + A+E G++F ETSAK N++ LF IA LP G L
Sbjct: 135 LVTDSPDKRAIQTVDAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
S + V+L+P Q C+C
Sbjct: 195 SNPRP---GVDLRPEAAGP----QANSCSC 217
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR + + + A+E G++F ETSAK N++ LF IA LP
Sbjct: 137 LVTEQPDKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKLP 186
>gi|432910626|ref|XP_004078445.1| PREDICTED: ras-related protein Rab-5A-like [Oryzias latipes]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 113/172 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF+ W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
+KR + ++ A + ++F+ETSAK N+ +F IA LP E ++
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPAAA 190
>gi|118381174|ref|XP_001023748.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|5738170|gb|AAD50282.1|AF169952_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89305515|gb|EAS03503.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777888|dbj|BAJ21340.1| Rab-family small GTPase Rab2G [Tetrahymena thermophila]
Length = 207
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 107/156 (68%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K + +GD SVGK++I+ +FM KF + TIG++F SK + ++ + V+LQ+WDTAGQE
Sbjct: 7 FKYIIIGDSSVGKSAILLQFMEGKFKAEHDTTIGVEFGSKIIQVKGKNVKLQVWDTAGQE 66
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
F+S+ SY R S A +VYDV NR+SF N +W+EE + + +VLVGNK DL +K
Sbjct: 67 SFKSITRSYYRGSICAFLVYDVTNRESFTNIQKWLEETQNYANDKITLVLVGNKIDLANK 126
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRK 165
RQVS +EG A++ + F+ETSAK G NI +FRK
Sbjct: 127 RQVSYDEGHEFAQKQEIQFVETSAKMGQNIDQVFRK 162
>gi|428174756|gb|EKX43650.1| hypothetical protein GUITHDRAFT_159784 [Guillardia theta CCMP2712]
Length = 204
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 123/202 (60%), Gaps = 7/202 (3%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
SPL +KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L D TV+ ++WD
Sbjct: 7 SPL-NFKLVLLGEGAVGKSSLVLRFVRGQFFDYQESTIGAAFLTQTVALNDTTVKFEIWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R ++ A++VYD+ + SF W+ E++ + +++I L GNK+
Sbjct: 66 TAGQERYHSLAPMYYRGAAAAIVVYDITSTDSFARAKSWVRELQRQGNPNIVIALAGNKS 125
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDM 184
DL KR+V +E A+E +MF+ETSAK N+ LF +IA LP + Q+D
Sbjct: 126 DLASKRKVEPDEARQYAEENNIMFMETSAKTASNVNELFVQIARKLPKQQ------QQDK 179
Query: 185 VDVNLKPTVNSSQTEQQGGGCA 206
+ VN + + + C+
Sbjct: 180 PSGSANIKVNEPKQDAKANNCS 201
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N ++F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLSSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|392333087|ref|XP_003752788.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
gi|392353206|ref|XP_003751425.1| PREDICTED: ras-related protein Rab-5A-like [Rattus norvegicus]
Length = 215
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTPMNVNEIFMAIAKKLPKNE 185
>gi|195115058|ref|XP_002002084.1| GI17188 [Drosophila mojavensis]
gi|193912659|gb|EDW11526.1| GI17188 [Drosophila mojavensis]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 116/189 (61%), Gaps = 8/189 (4%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF W++E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
+ R V +E A+E G++F+ETSAK G N+ +F IA LP K ++
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP--------KNDNNPGT 198
Query: 188 NLKPTVNSS 196
+KP N S
Sbjct: 199 VIKPNGNES 207
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K++ +GD GK+ ++ RF + F Y +TIG+DF KT+ ++ +T+++Q+WDTAGQE
Sbjct: 10 FKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKMQVWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R S+ ++VYDV NR SF + + W++E+ DV ++VGNK+DL DK
Sbjct: 70 RFRTITASYYRGSNGIILVYDVTNRDSFDHINYWMKEIDRLAAPDVCRLIVGNKSDLSDK 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R V+ EEG A+++GV F+ETSA N++ +F +A A+ + +S + V L
Sbjct: 130 RVVTTEEGQSLAQQYGVSFLETSALGNANVEEMFTAMAKAMRKKQGATSGGENGGNAVPL 189
Query: 190 KPTVNSSQTEQQGGGCAC 207
KP + + E + GCAC
Sbjct: 190 KP---AKKVEGE-SGCAC 203
>gi|348508689|ref|XP_003441886.1| PREDICTED: ras-related protein Rab-5C-like [Oreochromis niloticus]
Length = 222
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 114/180 (63%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 16 AAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFE 75
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 76 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFDRAKNWVKELQRQASPNIVIALAG 135
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
NK D+ +KR V +E A + ++F+ETSAK N+ +F IA LP E + Q
Sbjct: 136 NKADIANKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGTAGQ 195
>gi|340500595|gb|EGR27462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 169
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 101/126 (80%), Gaps = 1/126 (0%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
++SVS + K+K++FLGDQ VGKT II RFMYD FD T+G+DFL+KT++++D+++RL
Sbjct: 12 LSSVSRV-KHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRL 70
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
QLWDTAGQERFRSLIPSY+RD++ AVIV+DV +++SF + +W+++ + RG + ++
Sbjct: 71 QLWDTAGQERFRSLIPSYLRDATCAVIVFDVTSQESFNSIDKWVKDYKDHRGPEAPCIIG 130
Query: 121 GNKTDL 126
NKTDL
Sbjct: 131 ANKTDL 136
>gi|55670031|pdb|1TU3|A Chain A, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670032|pdb|1TU3|B Chain B, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670033|pdb|1TU3|C Chain C, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670034|pdb|1TU3|D Chain D, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
gi|55670035|pdb|1TU3|E Chain E, Crystal Structure Of Rab5 Complex With Rabaptin5
C-Terminal Domain
Length = 171
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 110/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 3 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 63 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 122
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 123 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 169
>gi|50979062|ref|NP_001003261.1| ras-related protein Rab-5C [Canis lupus familiaris]
gi|1710027|sp|P51147.1|RAB5C_CANFA RecName: Full=Ras-related protein Rab-5C
gi|415377|emb|CAA81626.1| Rab5c protein [Canis lupus familiaris]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|448111644|ref|XP_004201890.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
gi|359464879|emb|CCE88584.1| Piso0_001353 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 129/223 (57%), Gaps = 22/223 (9%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ S + KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++
Sbjct: 1 MSQASAVTSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SF+ RW++E++ + D+ I LV
Sbjct: 61 EIWDTAGQERFSSLAPMYYRNAQAALVVYDITKAASFIKARRWVKELQDQASKDITIALV 120
Query: 121 GNKTDLVDK--------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLF----RKIAA 168
GNK DLV+ R VSIEEG A+E G++F ETSAK N+ +F +KI
Sbjct: 121 GNKYDLVESDKDGEDGLRAVSIEEGKKLAEEEGLLFFETSAKTAHNVNEVFIDIGKKIPE 180
Query: 169 AL----PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
L PG S+ + +D++ P +++ + CAC
Sbjct: 181 NLTSNRPGTGATGSSGSDGRIDLSSTPNPSTNDS------CAC 217
>gi|432867924|ref|XP_004071340.1| PREDICTED: ras-related protein Rab-5C-like [Oryzias latipes]
Length = 218
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++V+D+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL +KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLTNKRNVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|11992279|gb|AAG42497.1|AF323991_1 small GTP-binding protein RAB5B [Oryza sativa Indica Group]
gi|108706223|gb|ABF94018.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113547459|dbj|BAF10902.1| Os03g0151900 [Oryza sativa Japonica Group]
gi|215740565|dbj|BAG97221.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768306|dbj|BAH00535.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192105|gb|EEC74532.1| hypothetical protein OsI_10050 [Oryza sativa Indica Group]
gi|222624202|gb|EEE58334.1| hypothetical protein OsJ_09439 [Oryza sativa Japonica Group]
Length = 199
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 31 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ AV+VYD+ + +SF W++E++ D+I+VLVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLVGNKADLH 150
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R VS +E A++ ++FIETSAK NI +F +IA LP
Sbjct: 151 ENRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRLP 194
>gi|195052912|ref|XP_001993394.1| GH13785 [Drosophila grimshawi]
gi|193900453|gb|EDV99319.1| GH13785 [Drosophila grimshawi]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF W++E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R V +E A+E G++F+ETSAK G N+ +F IA LP
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 190
>gi|297262644|ref|XP_001096821.2| PREDICTED: ras-related protein Rab-5B-like [Macaca mulatta]
Length = 207
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 118/194 (60%), Gaps = 5/194 (2%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLW 63
S + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++++ L+D TV+ ++W
Sbjct: 15 ASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIW 74
Query: 64 DTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNK 123
DTAGQER+ SL P Y R + A++VYD+ N+++F W++E++ + ++I L GNK
Sbjct: 75 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNK 134
Query: 124 TDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQED 183
DL +KR V EE A + ++F+ETSAK N+ LF I L G S
Sbjct: 135 ADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKNLGGTACRSRG---- 190
Query: 184 MVDVNLKPTVNSSQ 197
VD++ + N SQ
Sbjct: 191 -VDLHEQSQQNKSQ 203
>gi|301773541|ref|XP_002922175.1| PREDICTED: ras-related protein Rab-5C-like [Ailuropoda melanoleuca]
gi|281344533|gb|EFB20117.1| hypothetical protein PANDA_011151 [Ailuropoda melanoleuca]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|27066008|pdb|1N6H|A Chain A, Crystal Structure Of Human Rab5a
gi|40889551|pdb|1R2Q|A Chain A, Crystal Structure Of Human Rab5a Gtpase Domain At 1.05 A
Resolution
Length = 170
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 110/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 2 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 62 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 121
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 122 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKAD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR VS + + AKE ++F ETSAK N+K LF IA LP
Sbjct: 137 LVAEQPDKRAVSTADAEAYAKEANLLFFETSAKTAENVKELFTAIAKKLP 186
>gi|224113085|ref|XP_002316386.1| predicted protein [Populus trichocarpa]
gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222865426|gb|EEF02557.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + TIG FLS+T+ L+D T ++ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTIKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + ++F W++E++ D+++ LVGNK DL
Sbjct: 93 QERYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V ++G A++ G+ FIETSAK NI LF +IA LP
Sbjct: 153 EKREVPTQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLP 196
>gi|149723790|ref|XP_001495006.1| PREDICTED: ras-related protein Rab-5C-like [Equus caballus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|113866024|ref|NP_077776.2| ras-related protein Rab-5C [Mus musculus]
gi|38258917|sp|P35278.2|RAB5C_MOUSE RecName: Full=Ras-related protein Rab-5C
gi|18606182|gb|AAH23027.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|20988213|gb|AAH29678.1| RAB5C, member RAS oncogene family [Mus musculus]
gi|74186351|dbj|BAE42948.1| unnamed protein product [Mus musculus]
gi|74195703|dbj|BAE39656.1| unnamed protein product [Mus musculus]
gi|74204684|dbj|BAE35411.1| unnamed protein product [Mus musculus]
gi|112292959|dbj|BAF02857.1| Rab5C [Mus musculus]
gi|148670588|gb|EDL02535.1| RAB5C, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|347800697|ref|NP_001099310.2| ras-related protein Rab-5C [Rattus norvegicus]
gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norvegicus]
gi|165970759|gb|AAI58857.1| Rab5c protein [Rattus norvegicus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|302812155|ref|XP_002987765.1| rab family GTPase [Selaginella moellendorffii]
gi|302821214|ref|XP_002992271.1| rab family GTPase [Selaginella moellendorffii]
gi|300139921|gb|EFJ06652.1| rab family GTPase [Selaginella moellendorffii]
gi|300144384|gb|EFJ11068.1| rab family GTPase [Selaginella moellendorffii]
Length = 199
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 107/161 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG FL++T+ + + TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ N +SF +W++E++ + ++++ L GNK DL KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNAESFARAKKWVQELQRQGNANLVMALAGNKADLAAKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
++ +EG A E G+ F+ETSAK N+ LF +IA LP
Sbjct: 132 KIETQEGQSYADENGLFFMETSAKTAENVNELFYEIARKLP 172
>gi|354485034|ref|XP_003504689.1| PREDICTED: ras-related protein Rab-5C-like [Cricetulus griseus]
gi|344251933|gb|EGW08037.1| Ras-related protein Rab-5C [Cricetulus griseus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 113/178 (63%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E + T
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNVT 191
>gi|410904529|ref|XP_003965744.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 111/168 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF+ W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR + ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 186
>gi|195387317|ref|XP_002052342.1| GJ22226 [Drosophila virilis]
gi|194148799|gb|EDW64497.1| GJ22226 [Drosophila virilis]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF W++E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R V +E A+E G++F+ETSAK G N+ +F IA LP
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 190
>gi|444714079|gb|ELW54967.1| Ras-related protein Rab-5C [Tupaia chinensis]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 12/185 (6%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F++T+ +TIGIDF +T+ LE + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELEGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ N +SF N WI + DV +++GNK D+ D+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFYNIRTWIRNIEEHASNDVEKMILGNKCDMNDR 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLF------------RKIAAALPGMETLS 177
RQVS E+G+ A E+GV F+ETSAKA N++ F RK+ A+ P T
Sbjct: 129 RQVSKEKGEALAVEYGVKFLETSAKASINVEEGFISLARDIKAKMDRKLEASNPSNRTAH 188
Query: 178 STKQE 182
K E
Sbjct: 189 QLKNE 193
>gi|395826386|ref|XP_003786399.1| PREDICTED: ras-related protein Rab-5C isoform 1 [Otolemur
garnettii]
gi|395826388|ref|XP_003786400.1| PREDICTED: ras-related protein Rab-5C isoform 2 [Otolemur
garnettii]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|41055758|ref|NP_957264.1| RAB5A, member RAS oncogene family, b [Danio rerio]
gi|29124637|gb|AAH49057.1| RAB5A, member RAS oncogene family like [Danio rerio]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 120/201 (59%), Gaps = 5/201 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+KR + ++ A + ++F+ETSAK N+ +F IA LP E Q +
Sbjct: 139 ANKRALDFQDAQSYADDNSLLFMETSAKTSMNVSEIFMAIAKKLPKNE-----PQPAGAN 193
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
V+ ++T Q G C
Sbjct: 194 TARNRGVDLTETAQPAKGPCC 214
>gi|148222944|ref|NP_001080714.1| RAB5C, member RAS oncogene family [Xenopus laevis]
gi|33416792|gb|AAH56058.1| Rab5-prov protein [Xenopus laevis]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N ++F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKELQRQASPNIVIALSG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLSSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|346473575|gb|AEO36632.1| hypothetical protein [Amblyomma maculatum]
Length = 194
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 110/171 (64%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M++++ + K+ LGD VGK+SI+ RF+Y+ F+++ ++TIG F+ K + L DRT +
Sbjct: 1 MSTMNTTTEVKVCLLGDSGVGKSSILQRFVYNTFNSSAESTIGASFMMKNLVLHDRTFKF 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
+WDTAGQER+R+L P Y R ++ AVIVYD+ + SF W+ E++ ++ + +
Sbjct: 61 NIWDTAGQERYRALAPMYYRGAAAAVIVYDITSMDSFNAVQSWVRELQLHGEQNIALGIA 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
GNK DL D R+VS+ G+ A + G +F+ETSA NI+ LF IA +P
Sbjct: 121 GNKCDLEDHREVSLATGESYAHQHGAVFVETSALKATNIQELFMGIAMKVP 171
>gi|449455421|ref|XP_004145451.1| PREDICTED: ras-related protein RABF2b-like [Cucumis sativus]
Length = 199
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 115/169 (68%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ N+ SF +W++E++ + ++++ L GNK+DL+D R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
+V+ E+ A+E G+ F+ETSAK+ N+ +F +IA LP ++ + +T
Sbjct: 132 KVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
>gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|167538218|ref|XP_001750774.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770691|gb|EDQ84373.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 121/197 (61%), Gaps = 9/197 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ ++D TV+ ++WDTAGQ
Sbjct: 15 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVAVDDVTVKFEIWDTAGQ 74
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L GNK DL
Sbjct: 75 ERYHSLAPMYYRGAQAAIVVYDITNADTFQRARSWVKELQRQANPNIVIALAGNKADLAS 134
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVN 188
K+QV E A+E G++F+ETSAK N+ +F IA LP + + D + V
Sbjct: 135 KQQVDTNEARAYAEENGLLFMETSAKNAMNVTEIFMAIAKKLP--KNTQPGPRGDTLKV- 191
Query: 189 LKPTVNSSQTEQQGGGC 205
+ ++QGGGC
Sbjct: 192 ------ADDGKKQGGGC 202
>gi|388501294|gb|AFK38713.1| unknown [Medicago truncatula]
Length = 208
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 107/161 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ N +SF +W++E++ + ++++ GNK DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ FIETSAK N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLP 172
>gi|294942675|ref|XP_002783640.1| rab6, putative [Perkinsus marinus ATCC 50983]
gi|239896142|gb|EER15436.1| rab6, putative [Perkinsus marinus ATCC 50983]
Length = 392
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 115/167 (68%), Gaps = 4/167 (2%)
Query: 43 GIDFLSKTMYLED-RTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTS 101
GIDF++K + L+D R+V+LQLWDTAGQERFRSLIP+Y+RD++ V+V+D+ + +SF +
Sbjct: 228 GIDFVAKVLTLDDGRSVKLQLWDTAGQERFRSLIPAYLRDTAACVVVFDLTSEESFNSVR 287
Query: 102 RWIEEVRTERGGDVIIVLVGNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKP 161
W+ +V E+G V IVLVGNK D+ D RQVS EE A E GV + ETSAK+G +I+
Sbjct: 288 SWMSQVEDEKGSGVKIVLVGNKADMADSRQVSGEEARALAGELGVRYFETSAKSGVDIEQ 347
Query: 162 LFRKIAAALPGMETLSSTKQ-EDMVDVNLKPTVNSSQTEQQGGGCAC 207
+F +IA ++PG + S+ Q D + V +N++ T+ Q C+C
Sbjct: 348 IFTEIAKSIPGENSASAGSQGSDTIRVTSGDGMNNTATKSQ--SCSC 392
>gi|294879180|ref|XP_002768586.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239871257|gb|EER01304.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 238
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 110/160 (68%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
A +++ LGD +VGK+S++ RF ++FD+ + TIG+DF KT+ +++R +RLQ+WDTAG
Sbjct: 28 ATARILVLGDSAVGKSSLLMRFCENRFDSNFVITIGVDFRVKTLDIQERKIRLQIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QERFR++ P+Y R++ +++YD+ + +SF N W+ + V +LVGNK D+
Sbjct: 88 QERFRTITPAYYRNAMGVLLIYDMTDLKSFKNVDYWVRNLDQHADKTVQKLLVGNKADMA 147
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
KR+VS EEG A ++G+ F ETSAK+G N++ FR IA
Sbjct: 148 AKRKVSTEEGQALADKYGMTFFETSAKSGLNVEAAFRAIA 187
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 118/189 (62%), Gaps = 5/189 (2%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D++D R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
QV EE A+E G+ F+ETSAK N+ +F +IA L + S Q MV +N +
Sbjct: 133 QVPAEEAKAYAQENGLFFMETSAKTAINVNDIFYEIAKKLLQGQQAPS-PQAGMV-LNQR 190
Query: 191 P---TVNSS 196
P TV+SS
Sbjct: 191 PNERTVSSS 199
>gi|194759664|ref|XP_001962067.1| GF15280 [Drosophila ananassae]
gi|190615764|gb|EDV31288.1| GF15280 [Drosophila ananassae]
Length = 219
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 28 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF W++E+ + +++I L GNK DL
Sbjct: 88 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 147
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R V +E A+E G++F+ETSAK G N+ +F IA LP
Sbjct: 148 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 191
>gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene family [Xenopus laevis]
gi|27694927|gb|AAH43866.1| Rab5a-prov protein [Xenopus laevis]
gi|76780128|gb|AAI06314.1| Rab5a-prov protein [Xenopus laevis]
Length = 216
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 STKRAVDFQEAQAYADDNSLLFMETSAKTSVNVNEIFMAIAKKLPKTE 186
>gi|417397259|gb|JAA45663.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 215
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F I LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIGKKLPKNE 185
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 125/207 (60%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR + + + AKE G++F ETSAK N+ LF IA LP +
Sbjct: 137 LVTEQPDKRAIPAADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKLPLDQAGPRHAR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P +++ G C+C
Sbjct: 197 PGQRPGVSLAPENSNTNA---AGPCSC 220
>gi|357491715|ref|XP_003616145.1| GTP binding protein [Medicago truncatula]
gi|355517480|gb|AES99103.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 107/161 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ N +SF +W++E++ + ++++ GNK DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ FIETSAK N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLP 172
>gi|125985719|ref|XP_001356623.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|195147804|ref|XP_002014864.1| GL19400 [Drosophila persimilis]
gi|54644947|gb|EAL33687.1| GA17598 [Drosophila pseudoobscura pseudoobscura]
gi|194106817|gb|EDW28860.1| GL19400 [Drosophila persimilis]
Length = 218
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 27 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 86
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF W++E+ + +++I L GNK DL
Sbjct: 87 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 146
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R V +E A+E G++F+ETSAK G N+ +F IA LP
Sbjct: 147 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 190
>gi|17736973|ref|NP_523457.1| Rab5, isoform E [Drosophila melanogaster]
gi|24581101|ref|NP_722795.1| Rab5, isoform A [Drosophila melanogaster]
gi|24581103|ref|NP_722796.1| Rab5, isoform B [Drosophila melanogaster]
gi|24581105|ref|NP_722797.1| Rab5, isoform C [Drosophila melanogaster]
gi|24581107|ref|NP_722798.1| Rab5, isoform D [Drosophila melanogaster]
gi|24581110|ref|NP_722799.1| Rab5, isoform F [Drosophila melanogaster]
gi|442625421|ref|NP_001259925.1| Rab5, isoform G [Drosophila melanogaster]
gi|442625423|ref|NP_001259926.1| Rab5, isoform H [Drosophila melanogaster]
gi|442625425|ref|NP_001259927.1| Rab5, isoform I [Drosophila melanogaster]
gi|194854678|ref|XP_001968400.1| GG24527 [Drosophila erecta]
gi|195341957|ref|XP_002037568.1| GM18235 [Drosophila sechellia]
gi|195470737|ref|XP_002087663.1| GE15124 [Drosophila yakuba]
gi|195576007|ref|XP_002077868.1| GD22841 [Drosophila simulans]
gi|6517198|dbj|BAA87879.1| Drab5 [Drosophila melanogaster]
gi|6561903|dbj|BAA88244.1| Rab5 protein [Drosophila melanogaster]
gi|7295967|gb|AAF51265.1| Rab5, isoform A [Drosophila melanogaster]
gi|16648234|gb|AAL25382.1| GH24702p [Drosophila melanogaster]
gi|22945400|gb|AAN10422.1| Rab5, isoform B [Drosophila melanogaster]
gi|22945401|gb|AAN10423.1| Rab5, isoform C [Drosophila melanogaster]
gi|22945402|gb|AAN10424.1| Rab5, isoform D [Drosophila melanogaster]
gi|22945403|gb|AAN10425.1| Rab5, isoform E [Drosophila melanogaster]
gi|22945404|gb|AAN10426.1| Rab5, isoform F [Drosophila melanogaster]
gi|27227445|gb|AAN85552.1| Rab5 [Drosophila melanogaster]
gi|27227447|gb|AAN85553.1| Rab5 [Drosophila melanogaster]
gi|51477136|tpg|DAA01061.1| TPA_exp: Rab5 [Drosophila melanogaster]
gi|190660267|gb|EDV57459.1| GG24527 [Drosophila erecta]
gi|194132418|gb|EDW53986.1| GM18235 [Drosophila sechellia]
gi|194173764|gb|EDW87375.1| GE15124 [Drosophila yakuba]
gi|194189877|gb|EDX03453.1| GD22841 [Drosophila simulans]
gi|220945650|gb|ACL85368.1| Rab5-PA [synthetic construct]
gi|220955442|gb|ACL90264.1| Rab5-PA [synthetic construct]
gi|440213189|gb|AGB92462.1| Rab5, isoform G [Drosophila melanogaster]
gi|440213190|gb|AGB92463.1| Rab5, isoform H [Drosophila melanogaster]
gi|440213191|gb|AGB92464.1| Rab5, isoform I [Drosophila melanogaster]
Length = 219
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 28 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF W++E+ + +++I L GNK DL
Sbjct: 88 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 147
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R V +E A+E G++F+ETSAK G N+ +F IA LP
Sbjct: 148 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 191
>gi|403217405|emb|CCK71899.1| hypothetical protein KNAG_0I01080 [Kazachstania naganishii CBS
8797]
Length = 253
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P+ KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + T++ ++WD
Sbjct: 3 NPVTSIKLVLLGEVAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVNINEHTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYDV QSF+ W++E+ + D+II LVGNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKI 122
Query: 125 DLVD----KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
D++D +R+V+ EEG+ A+E ++F ETSAK G N+ +F KI +P
Sbjct: 123 DMLDEDPTERKVAREEGEKLAQEENLLFFETSAKTGANVNEVFLKIGENVP 173
>gi|195433707|ref|XP_002064849.1| GK14984 [Drosophila willistoni]
gi|194160934|gb|EDW75835.1| GK14984 [Drosophila willistoni]
Length = 220
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 108/164 (65%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +ED V+ ++WDTAG
Sbjct: 28 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAG 87
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R + A++VYD+ N+ SF W++E+ + +++I L GNK DL
Sbjct: 88 QERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 147
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+ R V +E A+E G++F+ETSAK G N+ +F IA LP
Sbjct: 148 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 191
>gi|348513153|ref|XP_003444107.1| PREDICTED: ras-related protein Rab-5A-like [Oreochromis niloticus]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKNE 186
>gi|319401891|ref|NP_001187496.1| ras-related protein rab-5a [Ictalurus punctatus]
gi|308323159|gb|ADO28716.1| ras-related protein rab-5a [Ictalurus punctatus]
Length = 217
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 15 AASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFE 74
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L G
Sbjct: 75 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAG 134
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL---SS 178
NK DL KR + ++ A + ++F+ETSAK N+ +F IA LP E SS
Sbjct: 135 NKADLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSS 194
Query: 179 TKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ VD+ ++T Q G C
Sbjct: 195 AGRNRGVDL--------AETAQPAKGPCC 215
>gi|393213286|gb|EJC98783.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 209
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ LED TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVSLEDGSTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AV+VYD+ S WI E++ + ++I L GNK DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSASLEKAKTWIRELQRQADPSIVIALCGNKVDLE 125
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
++RQV EE AKE G+M+ ETSAK G + +F ++A LP
Sbjct: 126 ERRQVLQEEAQNYAKEEGLMWGETSAKTGLGVNDIFTELAKKLP 169
>gi|299756416|ref|XP_001829316.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
gi|298411667|gb|EAU92276.2| GTP-binding protein RAB5 [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDR-TVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+D+ TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDQSTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AV+VYD+ S WI E++ + ++I L GNK DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSASLEKARTWIRELQRQADPSIVIALCGNKLDLA 125
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQVS EE A+E G+M+ ETSAK G ++ +F IA LP
Sbjct: 126 ARRQVSQEEAQKYAEEEGLMWAETSAKTGEGVQEIFTAIAKKLP 169
>gi|327275534|ref|XP_003222528.1| PREDICTED: ras-related protein Rab-5C-like [Anolis carolinensis]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 110/173 (63%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F+ W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNMDTFVRAKNWVKELQRQASSNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
KR V +E A + ++F+ETSAK N+ F IA LP E +T
Sbjct: 139 GSKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNETFMAIAKKLPKNEPQCAT 191
>gi|224097801|ref|XP_002311076.1| predicted protein [Populus trichocarpa]
gi|222850896|gb|EEE88443.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + TIG FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + ++F W++E++ D+++ LVGNK DL
Sbjct: 93 QERYAALAPLYYRGAAVAVIVYDITSPETFNKAQYWVKELQKHGSPDIVMALVGNKADLQ 152
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V ++G A++ G+ F+ETSAK NI LF +IA LP
Sbjct: 153 EKREVPTQDGIDYAEKNGMFFMETSAKTADNINQLFEEIAKRLP 196
>gi|237831479|ref|XP_002365037.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962701|gb|EEA97896.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487113|gb|EEE25359.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
gi|221506799|gb|EEE32416.1| rab12, putative [Toxoplasma gondii VEG]
Length = 238
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 6/204 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD VGK+ ++ RF D F +Y TIG+DF +T+ +++ V+LQ+WDTAGQE
Sbjct: 35 FKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQE 94
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + V+VYDV +R+SFL+ W+ EV + +LVGNK + D
Sbjct: 95 RFRTITSAYYRGADGIVLVYDVTDRESFLHVDEWLAEVNRYANENTCKILVGNKCEKADD 154
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME-----TLSSTKQEDM 184
RQVS+EEG KA+E G+ FIETSAK N+ F +A L M+
Sbjct: 155 RQVSVEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELIKMKQSAGAAAGRGVGPQG 214
Query: 185 VDVNLKPT-VNSSQTEQQGGGCAC 207
+ + +PT ++ Q+ G C+C
Sbjct: 215 MRIASQPTGADNRAMAQRTGNCSC 238
>gi|395532394|ref|XP_003768255.1| PREDICTED: uncharacterized protein LOC100922389 [Sarcophilus
harrisii]
Length = 495
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 108/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 298 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 357
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L GNK DL
Sbjct: 358 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADL 417
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 418 ASKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 465
>gi|351721304|ref|NP_001236437.1| uncharacterized protein LOC100305769 [Glycine max]
gi|255626561|gb|ACU13625.1| unknown [Glycine max]
Length = 203
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + +SF W++E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLL 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKI 166
+KR+V++++G A++ G+ FIETSAK NI LF ++
Sbjct: 152 EKREVAVQDGTDYAEKNGMFFIETSAKTADNINELFEEL 190
>gi|27066009|pdb|1N6I|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp
gi|27066010|pdb|1N6K|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gdp And Aluminum Fluoride
gi|27066012|pdb|1N6L|A Chain A, Crystal Structure Of Human Rab5a A30p Mutant Complex With
Gtp
Length = 170
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 108/165 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 4 ICQFKLVLLGESPVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 64 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 123
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 124 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 126/203 (62%), Gaps = 3/203 (1%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+S+S L + KL LGD VGK+S++ RF+ D F+ ++TIG F+SKT+ +ED+T +
Sbjct: 1 MSSLS-LREVKLCLLGDAGVGKSSLVLRFVADSFNENSESTIGASFMSKTLIVEDQTFKY 59
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q+WDTAGQE++R L P Y R+++ A+IVY++ +QSF W++E+R ++I+ +
Sbjct: 60 QIWDTAGQEKYRGLAPMYYRNAAAAIIVYEITRKQSFEALKHWVKELRQFGPSNIILAIA 119
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
GNK+DL +RQVS +E A +F+ETSA N+ LF ++ LP E+++ K
Sbjct: 120 GNKSDLESQRQVSSDEAKEYADSIDALFVETSALTADNVSYLFEALSKRLP-QESIAQPK 178
Query: 181 QEDMVDVNLKPTVNSSQTEQQGG 203
V + + T N + E+ G
Sbjct: 179 PASTVQL-VDETPNKPKNEKCGA 200
>gi|27066019|pdb|1N6P|A Chain A, Crystal Structure Of Human Rab5a A30e Mutant Complex With
Gppnhp
Length = 170
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 109/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 2 NKICQFKLVLLGESEVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 62 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 121
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 122 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|27066018|pdb|1N6O|A Chain A, Crystal Structure Of Human Rab5a A30k Mutant Complex With
Gppnhp
Length = 170
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 109/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 2 NKICQFKLVLLGESKVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 62 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 121
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 122 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|449703887|gb|EMD44244.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 125/201 (62%), Gaps = 9/201 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K KL+ +G+ SVGKT + RF+ D+F ++T+G+ +SK M + V+LQ+WDTAGQ
Sbjct: 2 KMKLIMIGESSVGKTCCMNRFVSDQFSEVTKSTVGVGMVSKEMEVNGIKVKLQIWDTAGQ 61
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIE---EVRTERGGDVIIVLVGNKTD 125
ERF +L +Y R++ VI++DV+NRQSF N S WI+ ++ +R ++VL GNKTD
Sbjct: 62 ERFATLSSNYFRNAMGGVIMFDVSNRQSFENVSNWIDACNKIEEKR----VLVLAGNKTD 117
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
L D+R ++ EEG+ +AKEFG+ + E SAK G I +F + + + + + V
Sbjct: 118 L-DERVITKEEGEARAKEFGLKYFEVSAKTGVGINEMFETLTKEIVALPKAEAQNNNEEV 176
Query: 186 DVNLKPTVNSSQTEQQGGGCA 206
+NL +V+ +++ GGC
Sbjct: 177 SINL-ASVDKETSKKGKGGCC 196
>gi|116782322|gb|ABK22463.1| unknown [Picea sitchensis]
gi|116793226|gb|ABK26663.1| unknown [Picea sitchensis]
gi|224284237|gb|ACN39854.1| unknown [Picea sitchensis]
Length = 200
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 112/166 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + + +V+L++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVKLEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ N SF+ +W++E++ + ++++ L GNK+D+++K
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLDSFVRAKKWVQELQKQGNPNMVMALAGNKSDMIEKS 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL 176
+VS EE A+E G+ F+ETSAK N+ LF +IA LP E +
Sbjct: 132 KVSPEEAKVYAQENGLFFMETSAKTAQNVNELFYEIARRLPKAEPV 177
>gi|410902731|ref|XP_003964847.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 220
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ANKRAVDHQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein RAB5B [Oryza sativa]
gi|5931625|dbj|BAA84717.1| rab5B [Oryza sativa Japonica Group]
Length = 199
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 31 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ AV+VYD+ + +SF W++E++ D+I+VLVGNK DL
Sbjct: 91 QERYAALAPLYYRGAAAAVVVYDITSPESFSKAQYWVKELQKHGSPDIIMVLVGNKADLH 150
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
R VS +E A++ ++FIETSAK NI +F +IA LP
Sbjct: 151 KNRHVSSQEAQEYAEKNNMVFIETSAKTADNINQVFEEIAKRLP 194
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 112/175 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ SVGK+S++ RF+ +F ++TIG FL++T++L D V+ ++WDTA
Sbjct: 18 ICQFKLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTIHLNDVAVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + ++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQATPGIVIALAGNKLDL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
R V +E A E G++F+ETSAK N+ +F+ IA LP ET ++ Q
Sbjct: 138 NTMRSVQTDESQTYAYENGLLFMETSAKTSANVTEIFKAIAEKLPKNETTNTAGQ 192
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQE 69
KLV LGD SVGK+ ++ RF D+F + TIG F+++++ ++D TV+ ++WDTAGQE
Sbjct: 15 KLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQE 74
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
R+RSL P Y R ++ A++VYD+ N ++F WI E++ D+++ LVGNK DL
Sbjct: 75 RYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYDLESS 134
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180
R V E AKE G++ ETSAK G+N++ LF +IA LP + L S
Sbjct: 135 RTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPNTKKLDSNN 185
>gi|410895511|ref|XP_003961243.1| PREDICTED: ras-related protein Rab-5C-like [Takifugu rubripes]
Length = 221
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 20 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 79
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L GNK D+
Sbjct: 80 GQERYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADI 139
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A E ++F+ETSAK N+ +F IA LP E
Sbjct: 140 ANKRAVEHQEAQTYADENSLLFMETSAKTAINVNEIFMAIAKKLPKSE 187
>gi|345560497|gb|EGX43622.1| hypothetical protein AOL_s00215g358 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 127/209 (60%), Gaps = 13/209 (6%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 13 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDENTTVKFEIWDT 72
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++I L GNK D
Sbjct: 73 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANESIVIALAGNKLD 132
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQ 181
L KR + + + AKE G++F+ETSAK N++ LF IA LP +
Sbjct: 133 LATANPSKRAIETADAEAYAKEAGLLFLETSAKTAENVQELFTAIARKLPTDQAGPRRGA 192
Query: 182 EDM--VDVNLKP-TVNSSQTEQQGGGCAC 207
+ VD+N P T N + G GCAC
Sbjct: 193 PGIRGVDMNRTPQTANLN-----GQGCAC 216
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 105/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 73
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK DL+D R
Sbjct: 74 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIVALAGNKADLLDTR 133
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QVS +E A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 134 QVSADEAKAYAQENGLFFMETSAKTATNVNDVFYEIAKKL 173
>gi|310790093|gb|EFQ25626.1| Ras family protein [Glomerella graminicola M1.001]
Length = 221
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 18 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 77
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 78 AGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLD 137
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLSSTK 180
LV DKR VS EE + A+E G++F ETSAK N+K LF IA LP +
Sbjct: 138 LVTEQPDKRAVSTEEAEAYAREAGLLFFETSAKTAENVKELFTAIAKKLPLDQAGPRHAR 197
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L+P S GG C+C
Sbjct: 198 PGQRQGVSLQPETPGSNV---GGPCSC 221
>gi|13537433|dbj|BAB40671.1| small GTPase RabD1 [Entamoeba histolytica]
Length = 196
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 125/201 (62%), Gaps = 9/201 (4%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
K KL+ +G+ SVGKT + RF+ D+F ++T+G+ +SK M + V+LQ+WDTAGQ
Sbjct: 2 KMKLIMIGESSVGKTCCMNRFVSDQFSEVTKSTVGVGMVSKEMEVNGIKVKLQIWDTAGQ 61
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIE---EVRTERGGDVIIVLVGNKTD 125
ERF +L +Y R++ VI++DV+NRQSF N S WI+ ++ +R ++VL GNKTD
Sbjct: 62 ERFATLSSNYFRNAMGGVIMFDVSNRQSFENVSNWIDGCNKIEEKR----VLVLAGNKTD 117
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
L D+R ++ EEG+ +AKEFG+ + E SAK G I +F + + + + + V
Sbjct: 118 L-DERVITKEEGEARAKEFGLKYFEVSAKTGVGINEMFETLTKEIVALPKAEAQNNNEEV 176
Query: 186 DVNLKPTVNSSQTEQQGGGCA 206
+NL +V+ +++ GGC
Sbjct: 177 SINL-ASVDKETSKKGKGGCC 196
>gi|55670041|pdb|1TU4|A Chain A, Crystal Structure Of Rab5-Gdp Complex
gi|55670042|pdb|1TU4|B Chain B, Crystal Structure Of Rab5-Gdp Complex
gi|55670043|pdb|1TU4|C Chain C, Crystal Structure Of Rab5-Gdp Complex
gi|55670044|pdb|1TU4|D Chain D, Crystal Structure Of Rab5-Gdp Complex
Length = 171
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 109/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 3 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 63 TAGQERYHSLAPXYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 122
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F ETSAK N+ +F IA LP
Sbjct: 123 DLANKRAVDFQEAQSYADDNSLLFXETSAKTSXNVNEIFXAIAKKLP 169
>gi|126307942|ref|XP_001364024.1| PREDICTED: ras-related protein Rab-5C-like [Monodelphis domestica]
Length = 216
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V +E A++ ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLGSKRAVDFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAGQE 69
KLV LGD SVGK+ ++ RF D+F + TIG F+++++ ++D TV+ ++WDTAGQE
Sbjct: 15 KLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQE 74
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
R+RSL P Y R ++ A++VYD+ N ++F WI E++ D+++ LVGNK DL
Sbjct: 75 RYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYDLESS 134
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
R V E AKE G++ ETSAK G+N++ LF +IA LP + L S
Sbjct: 135 RTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKLPNTKKLDSN 184
>gi|112983262|ref|NP_001037614.1| small GTP binding protein RAB5 [Bombyx mori]
gi|99082892|gb|ABF66621.1| small GTP binding protein RAB5 [Bombyx mori]
Length = 213
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 110/173 (63%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++ + +D TV+ +
Sbjct: 15 APQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFE 74
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N+ +F W++E++ + ++I L G
Sbjct: 75 IWDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAG 134
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK+DL KR V EE A E G++F+ETSAK N+ +F IA LP E
Sbjct: 135 NKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSE 187
>gi|348588935|ref|XP_003480220.1| PREDICTED: ras-related protein Rab-5A-like [Cavia porcellus]
Length = 215
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 110/168 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG F ++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGSCFSTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A++ ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYAEDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|27066016|pdb|1N6N|A Chain A, Crystal Structure Of Human Rab5a A30r Mutant Complex With
Gppnhp
Length = 170
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 109/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 2 NKICQFKLVLLGESRVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 62 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 121
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 122 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 110/163 (67%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ +++ T++ ++WDTAGQ
Sbjct: 7 HFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTIGAAFLTQTVNVDNVTIKFEIWDTAGQ 66
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+RSL P Y R ++ A++VYD+ +R+SF W++E++ +V+I L GNK DL +
Sbjct: 67 ERYRSLAPMYYRGAAAAIVVYDITSRESFNGAKTWVKELQRRGDPNVVIALAGNKCDLEE 126
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
RQ+ EE + A E G++F+ETSAK N++ +F I LP
Sbjct: 127 NRQIPREEAEEYAVENGLLFMETSAKMALNVREIFESIGHKLP 169
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 126/210 (60%), Gaps = 15/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + +++I L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + + A+E G++F ETSAK N++ LF IA LP G L
Sbjct: 135 LVTENPDKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKLPLDQAGPRNLR 194
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + V+L+P +Q C C
Sbjct: 195 TNPRP---GVDLRPEAPGTQG---ANSCQC 218
>gi|324522951|gb|ADY48161.1| Ras-related protein Rab-5B [Ascaris suum]
Length = 217
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 110/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L++ TV+ ++WD
Sbjct: 16 SKTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDETTVKFEIWD 75
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ +++SF W++E++ + +++I L GNK
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITSQESFAKAKNWVKELQRQASPNIVIALSGNKA 135
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V EE A + ++F+ETSAK N+ +F IA LP
Sbjct: 136 DLANKRVVEYEEAQAYADDNALLFMETSAKTAMNVNDIFLAIAKKLP 182
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 123/202 (60%), Gaps = 11/202 (5%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D+F++T+ +TIGIDF KT+ L+D+ ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ +SF N WI + DV +++GNK D+ DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRNIEQNASSDVERMILGNKCDMEDK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLF----RKIAAALPGMETLSSTKQE-DM 184
R VS E+G+ A E+GV F ETSAK+ +++ F R I + E + + E D+
Sbjct: 129 RVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVSTPHEHEKDI 188
Query: 185 VDVNLKPTVNSSQTEQQGGGCA 206
+ + KP S GGGC
Sbjct: 189 IKPDNKPEPKS------GGGCC 204
>gi|351700360|gb|EHB03279.1| Ras-related protein Rab-6A [Heterocephalus glaber]
Length = 151
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 100/136 (73%), Gaps = 5/136 (3%)
Query: 73 SLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQV 132
+LIPSYIRDS+ AV+ DV N F T++WI+ VRTERG DVII+L+GNKTDL DKRQV
Sbjct: 20 ALIPSYIRDSAAAVVFCDVTNVNLFQQTTKWID-VRTERGSDVIIMLLGNKTDLADKRQV 78
Query: 133 SIEEGDGKAKEFGVMFIETSAKAGFNIKPLF-RKIAAALPGMETLSSTKQEDMVDVNLKP 191
SIEEG+ KAKE VMF ETSAKAG ++K LF R++AAALPGME+ + DM+D+ L+
Sbjct: 79 SIEEGERKAKELNVMFTETSAKAGDSVKQLFRRRVAAALPGMESAQDRSRADMIDIKLEK 138
Query: 192 TVNSSQTEQQGGGCAC 207
TE GGC+C
Sbjct: 139 PQEQPVTE---GGCSC 151
>gi|6010031|emb|CAB57219.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 108/161 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLVVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + SF +W++E++ + ++++ L GNK DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V++EE A+E G+ F+ETSAK N+ +F +IA LP
Sbjct: 132 KVTVEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLP 172
>gi|357119478|ref|XP_003561466.1| PREDICTED: ras-related protein RABF2b-like [Brachypodium
distachyon]
Length = 203
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 108/160 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+V LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KVVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVSDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD++N+ SF+ +W++E++ + + ++ L GNK DL++ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDISNQASFIRAKKWVQELQAQGNPNTVVALAGNKADLLETR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QV IEE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRL 172
>gi|384493256|gb|EIE83747.1| ras protein [Rhizopus delemar RA 99-880]
Length = 208
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 125/200 (62%), Gaps = 3/200 (1%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D FD ++TIG FL++T+ L+D T V+ ++WDTAG
Sbjct: 11 QFKLVLLGESAVGKSSLVMRFVKDHFDEYRESTIGAAFLAQTISLDDNTTVKFEIWDTAG 70
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AVIVYD+ S W+ E++ + +++I L GNK+DL
Sbjct: 71 QERYKSLAPMYYRNANCAVIVYDITQASSLDKAKAWVNELQRQADPNIVIALAGNKSDLG 130
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDV 187
+R + + A E G++F ETSAK N+ LF IA +P ++ L+ + +++ +
Sbjct: 131 ARRAIETKVAQEYADEAGLLFFETSAKTAENVHDLFLAIAKRMP-LDQLADSSRKNRNGL 189
Query: 188 NLKPTVNSSQTEQQGGGCAC 207
N + V+ T GCAC
Sbjct: 190 NSRG-VDLENTGNDANGCAC 208
>gi|410911128|ref|XP_003969042.1| PREDICTED: ras-related protein Rab-5A-like [Takifugu rubripes]
Length = 216
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 139 ASKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKRLPKSE 186
>gi|350537173|ref|NP_001232748.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128640|gb|ACH45138.1| putative RAB5C member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 216
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 113/173 (65%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F+ W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL +KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|255630597|gb|ACU15658.1| unknown [Glycine max]
Length = 204
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 32 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++VAVIVYD+ + +SF W++E++ D+++ LVGNK DL+
Sbjct: 92 QERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLL 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
+KR+V++++G A++ + FIETSAK NI LF +IA
Sbjct: 152 EKREVAVQDGTDYAEKNDMFFIETSAKTADNINELFEEIA 191
>gi|389751301|gb|EIM92374.1| GTP-binding protein RAB5 [Stereum hirsutum FP-91666 SS1]
Length = 208
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+D TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVNLDDGMTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AV+VYD+ S WI E++ + ++I L GNK+DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSASLEKARNWIRELQRQADPSIVIALCGNKSDLA 125
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQV+ EE A+E G+M+ ETSAK+G + +F IA LP
Sbjct: 126 ARRQVTQEEAQKYAEEEGLMWAETSAKSGEGVSDIFTAIAKKLP 169
>gi|67469385|ref|XP_650671.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56467319|gb|EAL45284.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790150|dbj|BAD82871.1| small GTPase EhRabX23 [Entamoeba histolytica]
gi|449705577|gb|EMD45593.1| small GTPase EhRabX23, putative [Entamoeba histolytica KU27]
Length = 186
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 112/167 (67%), Gaps = 4/167 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++K+VF+GD SVGKT II RF FD +Y ATIG DF+++ M ++++ + LQ+WDTA
Sbjct: 4 ICRHKVVFIGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSLIP+YIR +SV VIVYD++++Q+F N W +EV ++ +VGNK D
Sbjct: 64 GQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDRES--TLVYIVGNKVD- 120
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
+R V+ EEG K+ ++ FIETSA I LF IA+ L +
Sbjct: 121 -SQRGVTKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNLAPL 166
>gi|407040921|gb|EKE40414.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 186
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 112/167 (67%), Gaps = 4/167 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++K+VF+GD SVGKT II RF FD +Y ATIG DF+++ M ++++ + LQ+WDTA
Sbjct: 4 ICRHKVVFIGDCSVGKTCIIGRFTSKNFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSLIP+YIR +SV VIVYD++++Q+F N W +EV ++ +VGNK D
Sbjct: 64 GQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDRES--TLVYIVGNKVD- 120
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
+R V+ EEG K+ ++ FIETSA I LF IA+ L +
Sbjct: 121 -SERGVTKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNLAPL 166
>gi|27066021|pdb|1N6R|A Chain A, Crystal Structure Of Human Rab5a A30l Mutant Complex With
Gppnhp
Length = 170
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 109/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 2 NKICQFKLVLLGESLVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 61
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 62 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 121
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 122 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 105/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 58 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 117
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D++D R
Sbjct: 118 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDMLDAR 177
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
V++EE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 178 HVAVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRL 217
>gi|340378375|ref|XP_003387703.1| PREDICTED: ras-related protein Rab-5C-like [Amphimedon
queenslandica]
Length = 221
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 109/165 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N+ +F W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKNWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
KR V ++ A+E ++F+ETSAK N+ +F IA LP
Sbjct: 139 ASKRMVEYDDAQAYAEENSLLFMETSAKTAMNVNEIFLAIAKKLP 183
>gi|325180967|emb|CCA15376.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 196
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 111/172 (64%), Gaps = 1/172 (0%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTA 66
+KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ L D V+ ++WDTA
Sbjct: 7 CHFKLVLLGDTAVGKSCLVVRFVRDEFYEFQEPTIGAAFLTQTVNLSDGCAVKFEIWDTA 66
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A++VYDV N+ SF W++E++ +V+I L GNK DL
Sbjct: 67 GQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDSNVVIALAGNKADL 126
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS 178
+R V++EE A++ G++ +ETSAK N+K LF IA LP T S+
Sbjct: 127 ETRRAVTLEEARQYAEDNGILHLETSAKTSANVKNLFVAIATNLPQSNTQSN 178
>gi|242038603|ref|XP_002466696.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
gi|241920550|gb|EER93694.1| hypothetical protein SORBIDRAFT_01g012480 [Sorghum bicolor]
Length = 203
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 105/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D++D R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKADMLDAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QV EE A+E G+ F+ETSAK+ N+ +F +IA L
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKSAINVNDIFYEIAKRL 172
>gi|550070|gb|AAA60245.1| GTP-binding protein [Homo sapiens]
Length = 215
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQE + SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQEGYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 115/182 (63%), Gaps = 7/182 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF +T+ L+++ ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ +SF N WI + DV +L+GNK +L DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVS E G+ A E+G+ F+ETSAKA N++ F +A+ + K E ++ N
Sbjct: 129 RQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKA-------KTEKRMEANN 181
Query: 190 KP 191
P
Sbjct: 182 PP 183
>gi|164661221|ref|XP_001731733.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
gi|159105634|gb|EDP44519.1| hypothetical protein MGL_1001 [Malassezia globosa CBS 7966]
Length = 220
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 114/170 (67%), Gaps = 2/170 (1%)
Query: 4 VSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQL 62
+S +A +KLV LG+ SVGK+S+ RF+ D+F+ ++TIG FL++T+ +D T++L++
Sbjct: 1 MSSVASFKLVLLGESSVGKSSVALRFVKDQFEDYRESTIGAAFLTQTVRRQDGATIKLEI 60
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQER++SL P Y R++ A++VYD+ ++SF N WI E++ ++ I LVGN
Sbjct: 61 WDTAGQERYKSLAPMYYRNAHCALVVYDITEQESFENAKSWIRELQRHADANITIALVGN 120
Query: 123 KTDLVD-KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
K DL + R VS E+G A G+MF+ETSAK N+ LF +A LP
Sbjct: 121 KLDLAETSRTVSAEDGQKYADSEGLMFMETSAKTPTNVTELFTLVANKLP 170
>gi|242006074|ref|XP_002423881.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507127|gb|EEB11143.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 215
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 108/166 (65%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ +D TV+ ++WDTAGQ
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTICDDDLTVKFEIWDTAGQ 80
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R + A++VYD+ N +F W++E++ +++I L GNK DL D
Sbjct: 81 ERYHSLAPMYYRGAQAAIVVYDIQNMDTFGKAKSWVKELQRHASPNIVIALAGNKADLSD 140
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
KR V +E A++ G++F+ETSAK N+ +F IA LP E
Sbjct: 141 KRMVETDEAQAYAQDHGLLFMETSAKTAMNVNEIFLAIAKKLPKNE 186
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKAD 135
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR V + + AKE ++F ETSAK N+K LF IA LP
Sbjct: 136 LVAEQPDKRAVPTTDAEAYAKEANLLFFETSAKTAENVKELFTAIAKKLP 185
>gi|355714965|gb|AES05179.1| RAB5C, member RAS oncoprotein family [Mustela putorius furo]
Length = 215
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 110/170 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 46 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 105
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 106 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 165
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
NK DL KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 166 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLP 215
>gi|326436303|gb|EGD81873.1| RAB5C protein [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 125/200 (62%), Gaps = 9/200 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D T V+ ++WDT
Sbjct: 9 MNQFKLVLLGETAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDGTKVKFEIWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER+ SL P Y R + A++VYD+ + SFL W++E++ + +I L GNK D
Sbjct: 69 AGQERYHSLAPMYYRGAQAAIVVYDITSHASFLRAKSWVKELQKQAENVAVIALAGNKAD 128
Query: 126 LVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMV 185
L +R+V EE + A+E ++F+ETSAK FN+ +F IA LP + T++ D
Sbjct: 129 LAARREVQTEEVEAYAQEEKLLFMETSAKTAFNVVEIFAAIAKHLPKNQ---DTRRGD-- 183
Query: 186 DVNLKPTVNSSQTEQQGGGC 205
VNL+ + E + GGC
Sbjct: 184 GVNLR---RAEAAEAKSGGC 200
>gi|336275989|ref|XP_003352748.1| hypothetical protein SMAC_01582 [Sordaria macrospora k-hell]
gi|380094637|emb|CCC08018.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 220
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 17 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 76
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 77 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 136
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTK 180
LV DKR + + AKE G++F ETSAK N++ LF +IA LP + +
Sbjct: 137 LVQEQPDKRAIQTADAAAYAKEAGLLFFETSAKTAENVQNLFTEIAKKLPLDQVGPRHAR 196
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P ++Q GG CAC
Sbjct: 197 PGQRPGVSLAPEAANTQV---GGPCAC 220
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 115/182 (63%), Gaps = 7/182 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF +T+ L+++ ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ +SF N WI + DV +L+GNK +L DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCELNDK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVS E G+ A E+G+ F+ETSAKA N++ F +A+ + K E ++ N
Sbjct: 129 RQVSKERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDIKA-------KTEKRMEANN 181
Query: 190 KP 191
P
Sbjct: 182 PP 183
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 115/182 (63%), Gaps = 7/182 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF +T+ L+++ ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ +SF N WI + DV +L+GNK +L DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCELNDK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVS E G+ A E+G+ F+ETSAKA N++ F +A+ + K E ++ N
Sbjct: 129 RQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKA-------KTEKRMEANN 181
Query: 190 KP 191
P
Sbjct: 182 PP 183
>gi|195999668|ref|XP_002109702.1| hypothetical protein TRIADDRAFT_20540 [Trichoplax adhaerens]
gi|190587826|gb|EDV27868.1| hypothetical protein TRIADDRAFT_20540, partial [Trichoplax
adhaerens]
Length = 190
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 12 LVFLGDQSVGKTSIITRFMYDKF-DTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
++ +GD VGKT ++ R+ F ++ +T+G+DF +K + ++ V+LQ+WDTAGQER
Sbjct: 1 VMLIGDSGVGKTCVLVRYKNGAFLSGSFISTVGLDFRNKIVDVDGTNVKLQIWDTAGQER 60
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
FRS+ +Y RD+ +++YDV N++SF N WIE++ G DV+++L+GNK DL ++
Sbjct: 61 FRSVTHAYFRDAHALLLLYDVTNKKSFENVLSWIEDINAHAGNDVVVMLLGNKADLTTEK 120
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
+ E+G+ AK+ + F+ETSAK G NI F IA L +TL S + D N+K
Sbjct: 121 VIKTEQGEKLAKDNNIAFMETSAKTGMNIDLAFHAIAKNLKEKKTLRSNGR----DFNMK 176
Query: 191 PTVNSSQTEQQGGGCA 206
VN E++ GC
Sbjct: 177 EYVNK---EKKRSGCC 189
>gi|68479347|ref|XP_716205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68479514|ref|XP_716121.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483715|ref|XP_714216.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68483800|ref|XP_714175.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435716|gb|EAK95092.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46435764|gb|EAK95139.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437777|gb|EAK97117.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46437866|gb|EAK97205.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238880208|gb|EEQ43846.1| vacuolar protein sorting-associated protein 21 [Candida albicans
WO-1]
Length = 216
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + +RT++ ++WD
Sbjct: 6 APATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGERTIKYEIWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYD+ SF+ W++E+ + D+ I LVGNK
Sbjct: 66 TAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDITIALVGNKL 125
Query: 125 DLVDK---------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET 175
DLV+ R+VS+EEG A E G++F ETSAK G N+ +F I + +P +
Sbjct: 126 DLVEDDSAEDGETLRKVSVEEGQSLADEEGLLFFETSAKTGNNVNEVFVGIGSKIPSVTV 185
Query: 176 LSSTKQE 182
QE
Sbjct: 186 TGGEAQE 192
>gi|355560060|gb|EHH16788.1| hypothetical protein EGK_12135 [Macaca mulatta]
Length = 215
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 109/168 (64%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 18 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 77
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + ++VYD+ N +SF W++E++ + +++I L GNK DL
Sbjct: 78 GQERYHSLAPMYYRGAQAVIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADL 137
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+KR V +E A + ++F++TSAK N+ +F IA LP E
Sbjct: 138 ANKRAVDFQEAQSYADDNSLLFMKTSAKTSMNVNEIFMAIAKKLPKNE 185
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 121/199 (60%), Gaps = 9/199 (4%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N +SF N ++W+ + DV+ +++GNK D+ D+
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS E G+ A++ G+ F ETSAK ++ F +A A+ K D D
Sbjct: 130 RVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILA-------KMPDSTDEQS 182
Query: 190 KPTVNSSQTEQQ--GGGCA 206
+ TVN Q ++Q GGC
Sbjct: 183 RDTVNPVQPQRQSSSGGCC 201
>gi|154421140|ref|XP_001583584.1| Ras family protein [Trichomonas vaginalis G3]
gi|72536124|gb|AAZ73170.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121917826|gb|EAY22598.1| Ras family protein [Trichomonas vaginalis G3]
Length = 218
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 129/220 (58%), Gaps = 23/220 (10%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++K+VF+G+ +VGKTSII ++MYD +Q T+GIDF +KT+ E +++R+Q+WDTA
Sbjct: 3 MIQHKVVFVGNSAVGKTSIINQYMYDSVSADHQPTVGIDFFAKTVNYEGKSIRMQIWDTA 62
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQE+F SLIPSYIRDS+VA+ V+D+ +R SF + +W + V +II VGNK DL
Sbjct: 63 GQEKFHSLIPSYIRDSTVAIFVFDITSRSSFEDLEKWFKMVLDIANPRLII--VGNKCDL 120
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD 186
+R+V+ ++ + A +IETSA A NI LF IA+ E+ S+ + + +
Sbjct: 121 DAEREVTKDDAEKYAIIKSADYIETSAIAPTNITELFNLIAST--PSESESTPQNTNQLA 178
Query: 187 VNLKP-------------------TVNSSQTEQQGGGCAC 207
++ P + Q GGGC+C
Sbjct: 179 LDTTPRQALPAPEPTPAAAPAPSVDLTKPANPQAGGGCSC 218
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 115/182 (63%), Gaps = 7/182 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF +T+ L+++ ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ +SF N WI + DV +L+GNK +L DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELHDK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVS E G+ A E+G+ F+ETSAKA N++ F +A+ + K E ++ N
Sbjct: 129 RQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKA-------KTEKRMEANN 181
Query: 190 KP 191
P
Sbjct: 182 PP 183
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 121/199 (60%), Gaps = 9/199 (4%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N +SF N ++W+ + DV+ +++GNK D+ D+
Sbjct: 69 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS E G+ A++ G+ F ETSAK ++ F +A A+ K D D
Sbjct: 129 RVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILA-------KMPDSTDEQS 181
Query: 190 KPTVNSSQTEQQ--GGGCA 206
+ TVN Q ++Q GGC
Sbjct: 182 RDTVNPVQPQRQSSSGGCC 200
>gi|449298295|gb|EMC94310.1| hypothetical protein BAUCODRAFT_544119 [Baudoinia compniacensis
UAMH 10762]
Length = 227
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 128/214 (59%), Gaps = 15/214 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+D+T V+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDDQTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 135
Query: 126 LVD----KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP--------GM 173
L + KR + + + A+E G++F ETSAK N+K LF IA LP GM
Sbjct: 136 LAESDPSKRAIEKADAEAYAREAGLLFFETSAKTSENVKELFTAIAKKLPIEQASQRGGM 195
Query: 174 ETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + + VD+ + T GGC C
Sbjct: 196 RSAAGGR-PGGVDLGNR-QAGGQTTAGAAGGCNC 227
>gi|168034319|ref|XP_001769660.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679009|gb|EDQ65461.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 109/169 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S+ RF+ +F ++TIG FL++T+ + + TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLSLRFVRGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ N SF +W++E++ + ++++ L GNK DL KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSAKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
+V EEG A+E G+ F+ETSAK N+ LF +IA LP + +T
Sbjct: 132 KVEAEEGQSYAEENGLFFMETSAKTAQNVNELFYEIARKLPKAQPAQAT 180
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 15 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDT 74
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 75 AGQERYKSLAPMYYRNANCAVVVYDITQVSSLDKAKSWVKELQRQANENIIIALAGNKLD 134
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR + + + A+E G++F ETSAK+ N++ LF IA LP
Sbjct: 135 LVMDSPDKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKLP 184
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+++T V+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKAD 135
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
LV DKR V + + A+E ++F ETSAK N+K LF IA LP
Sbjct: 136 LVAEQPDKRAVPTADAEAYAREANLLFFETSAKTAENVKELFTAIAKKLP 185
>gi|308321755|gb|ADO28020.1| ras-related protein rab-5a [Ictalurus furcatus]
Length = 217
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 15 AASNKICQFKLVLLGESAVGKSSLMLRFVKGQFHEFQESTIGGAFLTQTVCLDDTTVKFE 74
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L G
Sbjct: 75 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAG 134
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETL---SS 178
NK DL KR + ++ A + ++F+ETSAK N+ +F IA LP E SS
Sbjct: 135 NKADLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQAPGSS 194
Query: 179 TKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ VD+ ++T Q G C
Sbjct: 195 AGRNRGVDL--------AETAQPAKGPCC 215
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 116/183 (63%), Gaps = 7/183 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F +T+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N +SF N +W+ + DV +++GNK D+ DK
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMILGNKCDMTDK 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL----PGMETLSSTKQEDMV 185
R VSIE G+ A+E + F+ETSAKA NI+ FR++A A+ G ET T D V
Sbjct: 130 RVVSIERGESIAREHDIRFMETSAKANINIERAFRELAEAILDKTSGKET---TDNPDRV 186
Query: 186 DVN 188
VN
Sbjct: 187 VVN 189
>gi|168054193|ref|XP_001779517.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
gi|162669099|gb|EDQ55693.1| Rab5/RabF-family small GTPase [Physcomitrella patens subsp. patens]
Length = 201
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 106/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S+ RF+ +F ++TIG FL++T+ + + TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLALRFVKGQFFDYQESTIGAAFLTQTLAVNETTVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ N SF +W++E++ + ++++ L GNK DL KR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMALAGNKADLSSKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
++ EEG A+E G+ F+ETSAK N+ LF +IA LP
Sbjct: 132 KIEAEEGQSYAEENGLFFMETSAKTSQNVNELFYEIARKLP 172
>gi|399217553|emb|CCF74440.1| unnamed protein product [Babesia microti strain RI]
Length = 226
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 102/163 (62%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+YKLV LG+ +VGK+ + TRF D F +TIG F++KT+ LE V+ ++WDTAGQ
Sbjct: 47 QYKLVLLGETAVGKSCLTTRFCKDVFLDYQDSTIGAAFMTKTINLESSVVKFEIWDTAGQ 106
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+RSL P Y R +S A+IVYD+ + +F WI E++ DVII L GNK DL
Sbjct: 107 ERYRSLAPMYYRGASAALIVYDITSADTFEQARSWINELKAVSRADVIIALAGNKVDLER 166
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
R V IE AK +F+ETSAK G N++ +F KIA LP
Sbjct: 167 NRSVDIETAQNFAKLNNCLFMETSAKTGHNVQEMFMKIANLLP 209
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 115/182 (63%), Gaps = 7/182 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF +T+ L+++ ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ +SF N WI + DV +L+GNK +L DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELNDK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVS E G+ A E+G+ F+ETSAKA N++ F +A+ + K E ++ N
Sbjct: 129 RQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKA-------KTEKRMEANN 181
Query: 190 KP 191
P
Sbjct: 182 PP 183
>gi|225708202|gb|ACO09947.1| Ras-related protein Rab-5C [Osmerus mordax]
Length = 220
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK D+ +KR + +E A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADIANKRAIDQQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|449473409|ref|XP_002186832.2| PREDICTED: uncharacterized protein LOC100219191 [Taeniopygia
guttata]
Length = 423
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 123/202 (60%), Gaps = 11/202 (5%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD SVGKT ++ RF F +TIG+DF K++ ++ + V+LQ+WDTAGQE
Sbjct: 229 FKLVLIGDASVGKTCLVQRFKTGAFSERQGSTIGVDFTMKSLEIQGKRVKLQIWDTAGQE 288
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R ++ A++ YD++ R SFL+ RWIE+VR G +++ +L+GNK+DL D
Sbjct: 289 RFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIGNKSDLSDL 348
Query: 130 RQVSIEEGDGKAKEFG--VMFIETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQEDMV 185
R+V +EE A+ + + IETSAK N++ F K+A L + S K D +
Sbjct: 349 REVQLEEAQSLAEHYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPMFSEKNTDSI 408
Query: 186 DVNLKPTVNSSQTEQQGGGCAC 207
++ K V +G GC C
Sbjct: 409 KLDSKDVV-------EGWGCGC 423
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 120/196 (61%), Gaps = 9/196 (4%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV LGD +VGK+S + RF+ ++F Q TIG FL++T+ LED V+ ++WDTAGQE
Sbjct: 9 FKLVLLGDAAVGKSSCVERFVKNEFFEFQQPTIGAAFLTQTIPLEDYIVKFEIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
R+RSL P Y R ++ A++VYD+ + SF WI+E++ + D++I L GNK DL +
Sbjct: 69 RYRSLAPMYYRGAAAALVVYDITDPDSFDGAKTWIQELQRQGAADIVIGLAGNKLDLSSQ 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R++ +E A E G +F ETSAK G N++ +F IA LP L Q D +
Sbjct: 129 RKIDSKEAKSFADENGCIFYETSAKTGANVQEIFVAIAQKLP-KNVLPP--QNDHI---- 181
Query: 190 KPTVNSSQTEQQGGGC 205
T+ S++ +Q G C
Sbjct: 182 --TILSNEEKQNPGCC 195
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 118/185 (63%), Gaps = 3/185 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + SF +W++E++ + ++++ L GNK+DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALTGNKSDLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
+V+ EE A+E G+ F+ETSAK+ N+ +F +IA LP + + +VD +
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLPRAQPAQNPAGMVLVD---R 188
Query: 191 PTVNS 195
PT S
Sbjct: 189 PTEGS 193
>gi|422294642|gb|EKU21942.1| Ras-related protein Rab-5C, partial [Nannochloropsis gaditana
CCMP526]
Length = 261
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 110/166 (66%), Gaps = 1/166 (0%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ +KLV LGD +VGK+ ++ RF+ D+F + TIG FL++ + LED TV+ ++WDTA
Sbjct: 72 VCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQAVVLEDSTVKFEIWDTA 131
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSL P Y R +S A++VYD+ N +SF W++E++ VII L GNK DL
Sbjct: 132 GQERYRSLAPMYYRGASAAIVVYDITNAESFKGAKSWVKELQRRGDPSVIIALAGNKADL 191
Query: 127 V-DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V +++ + A+E G++ ETSAK N+K LF +IA LP
Sbjct: 192 AGTRRKVDLKDAEEYARENGLLHFETSAKDAQNVKTLFVEIAKRLP 237
>gi|115489706|ref|NP_001067340.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|12057010|emb|CAC19792.1| RAB5A protein [Oryza sativa Indica Group]
gi|108863007|gb|ABG22102.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113649847|dbj|BAF30359.1| Os12g0631100 [Oryza sativa Japonica Group]
gi|215686475|dbj|BAG87736.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 104/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D+V+ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QV EE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|226498408|ref|NP_001147694.1| ras-related protein RHN1 [Zea mays]
gi|195613140|gb|ACG28400.1| ras-related protein RHN1 [Zea mays]
gi|195652993|gb|ACG45964.1| ras-related protein RHN1 [Zea mays]
gi|238006674|gb|ACR34372.1| unknown [Zea mays]
Length = 203
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 105/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D++D R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNPNTIVALAGNKVDMLDAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
V++EE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 133 HVAVEEAKTYAQENGLFFMETSAKTAINVNDIFYEIAKRL 172
>gi|167832328|dbj|BAG09234.1| plant-unique Rab5 homolog [Physcomitrella patens subsp. patens]
Length = 226
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 5/185 (2%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD + + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 31 RIKLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTISLQDSTNVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ SL P Y R ++ AV+VYD+ N ++FL W++E++ D+++ LVGNK DL
Sbjct: 91 QERYASLAPLYYRGAAAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLE 150
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA----AALPGMETLSSTKQED 183
++R+VS E AK G+ FIETSAK N+ LF + A P +L S +
Sbjct: 151 NEREVSHAEAQAYAKSNGMFFIETSAKTSENVNQLFEQCTEGDIARKPKHPSLYSRSRNS 210
Query: 184 MVDVN 188
+ V+
Sbjct: 211 LSKVH 215
>gi|365758386|gb|EHN00232.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 209
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 124/209 (59%), Gaps = 20/209 (9%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD-- 128
F SL P Y R++ A++VYDV QSF+ W++E+ + D+II LVGNK D++
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDVLQDG 128
Query: 129 -KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP---------GMETLSS 178
+R+V+ EEG+ A+E G++F ETSAK G N+ +F I +P E S+
Sbjct: 129 GERKVAKEEGEKLAEEKGLLFFETSAKTGENVNNVFLGIGEKIPLKKAEEQNNANEGESN 188
Query: 179 TKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
++ D+ N + NS+ C+C
Sbjct: 189 NQRVDLNAANNGTSANSA--------CSC 209
>gi|357146391|ref|XP_003573975.1| PREDICTED: ras-related protein RABF1-like [Brachypodium distachyon]
Length = 200
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
K KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 31 KVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R + AV+VYD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 91 QERYAALAPLYYRGAGAAVVVYDITSAESFSKAQYWVKELQKHGSQDMVMALVGNKADLH 150
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR VS ++ A+ + F+ETSAK NI LF +IA LP
Sbjct: 151 EKRTVSSQDAQEYAERNSMFFVETSAKTADNINQLFEEIAKRLP 194
>gi|45383121|ref|NP_989856.1| ras-related protein Rab-5C [Gallus gallus]
gi|326934183|ref|XP_003213173.1| PREDICTED: ras-related protein Rab-5C-like [Meleagris gallopavo]
gi|82246551|sp|Q98932.1|RAB5C_CHICK RecName: Full=Ras-related protein Rab-5C; AltName: Full=Rab5C-like
protein
gi|1531769|emb|CAA69142.1| rab5C-like protein [Gallus gallus]
gi|449267489|gb|EMC78432.1| Ras-related protein Rab-5C [Columba livia]
Length = 216
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 112/173 (64%)
Query: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQ 61
A+ + + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ +
Sbjct: 14 AAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 73
Query: 62 LWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVG 121
+WDTAGQER+ SL P Y R + A++VYD+ N +F+ W++E++ + +++I L G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAG 133
Query: 122 NKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
NK DL KR V ++ A + ++F+ETSAK N+ +F IA LP E
Sbjct: 134 NKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNE 186
>gi|50234889|ref|NP_940892.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910891|ref|NP_001191812.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910893|ref|NP_001191813.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910895|ref|NP_001191814.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|325910897|ref|NP_001191815.1| ras-related protein Rab-43 isoform a [Homo sapiens]
gi|332261797|ref|XP_003279953.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Nomascus
leucogenys]
gi|332261799|ref|XP_003279954.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Nomascus
leucogenys]
gi|332261801|ref|XP_003279955.1| PREDICTED: ras-related protein Rab-43 isoform 3 [Nomascus
leucogenys]
gi|332817855|ref|XP_003339099.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|332817859|ref|XP_003310046.1| PREDICTED: ras-related protein Rab-43 isoform 4 [Pan troglodytes]
gi|410037466|ref|XP_003950231.1| PREDICTED: ras-related protein Rab-43 [Pan troglodytes]
gi|426342028|ref|XP_004036318.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Gorilla gorilla
gorilla]
gi|426342030|ref|XP_004036319.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Gorilla gorilla
gorilla]
gi|74727944|sp|Q86YS6.1|RAB43_HUMAN RecName: Full=Ras-related protein Rab-43; AltName: Full=Ras-related
protein Rab-41
gi|27549389|gb|AAO17291.1| RAB43 [Homo sapiens]
gi|38382891|gb|AAH62319.1| RAB43, member RAS oncogene family [Homo sapiens]
gi|119599689|gb|EAW79283.1| hCG2022580, isoform CRA_f [Homo sapiens]
gi|158255464|dbj|BAF83703.1| unnamed protein product [Homo sapiens]
gi|383413231|gb|AFH29829.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|384941264|gb|AFI34237.1| ras-related protein Rab-43 isoform a [Macaca mulatta]
gi|410219510|gb|JAA06974.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410251892|gb|JAA13913.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410301460|gb|JAA29330.1| RAB43, member RAS oncogene family [Pan troglodytes]
gi|410331215|gb|JAA34554.1| RAB43, member RAS oncogene family [Pan troglodytes]
Length = 212
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 121/201 (60%), Gaps = 10/201 (4%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD SVGKT ++ RF F +TIG+DF KT+ ++ + V+LQ+WDTAGQE
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R ++ A++ YD+ R SFL+ WIE+VR G +++ +L+GNK+DL +
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSEL 138
Query: 130 RQVSIEEGDGKAKEFGVMF-IETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQEDMVD 186
R+VS+ E A+ + ++ IETSAK N++ F ++A L L S K D +
Sbjct: 139 REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQ 198
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+N K +G GC C
Sbjct: 199 LNSKDI-------GEGWGCGC 212
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 107/161 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + SF +W++E++ + ++++ L GNK DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ F+ETSAK N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLP 172
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 109/161 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + SF +W++E++ + ++++ L GNK+DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMALAGNKSDLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ F+ETSAK+ N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRLP 172
>gi|4678309|emb|CAB41100.1| small GTP-binding protein-like (fragment) [Arabidopsis thaliana]
Length = 224
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAVIVYD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 91 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 150
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR+V E+G A++ G+ FIETSAK NI LF + LP
Sbjct: 151 EKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEVCTSFLP 194
>gi|167383306|ref|XP_001736482.1| rab6 [Entamoeba dispar SAW760]
gi|165901130|gb|EDR27285.1| rab6, putative [Entamoeba dispar SAW760]
Length = 186
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 112/167 (67%), Gaps = 4/167 (2%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++K+VF+GD SVGKT II RF FD +Y ATIG DF+++ M ++++ + LQ+WDTA
Sbjct: 4 ICRHKVVFIGDCSVGKTCIIGRFTSKIFDMSYDATIGTDFVTQIMDVDNKKIELQIWDTA 63
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSLIP+YIR +SV VIVYD++++Q+F N W +EV ++ +VGNK D
Sbjct: 64 GQERYRSLIPNYIRGASVVVIVYDISDKQTFNNIDHWFDEVPDRNS--TLVYIVGNKVD- 120
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGM 173
+R V+ EEG K+ ++ FIETSA I LF IA+ L +
Sbjct: 121 -SERGVTKEEGMQKSYKWSARFIETSALKDIGITDLFEDIASNLAPL 166
>gi|295789553|pdb|3MJH|A Chain A, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
gi|295789555|pdb|3MJH|C Chain C, Crystal Structure Of Human Rab5a In Complex With The C2h2
Zinc Finger Of Eea1
Length = 168
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 109/167 (65%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WD
Sbjct: 1 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 60
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAG ER+ SL P Y R + A++VYD+ N +SF W++E++ + +++I L GNK
Sbjct: 61 TAGLERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 120
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
DL +KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 121 DLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 167
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 118/178 (66%), Gaps = 4/178 (2%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
MA S +KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF KT L + ++L
Sbjct: 1 MAKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKIKL 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
Q+WDTAGQERF ++ SY R++ ++VYDV N +SF N ++W++ ++ +V +++
Sbjct: 61 QIWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLQNIQEHAAEEVDKMIL 120
Query: 121 GNKTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL----PGME 174
GNK D+ DKR +S E+G+ ++E+G+ F+ETSAK NI+ F +A ++ PG+E
Sbjct: 121 GNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFMDLAESILERTPGVE 178
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 117/181 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+V +GD VGKT+ ++RF +F + + TIG++F +K + +E ++ Q+WDTAGQER
Sbjct: 16 KVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKCQIWDTAGQER 75
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+R++ +Y R + A++VYDV SF + RW+ E+R D++++LVGNKTDLVD+R
Sbjct: 76 YRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLVGNKTDLVDQR 135
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
VS+++G A+ G++FIETSA G N++ F ++AA + G+ + + D L
Sbjct: 136 DVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLESQAAEDEELA 195
Query: 191 P 191
P
Sbjct: 196 P 196
>gi|6324663|ref|NP_014732.1| Vps21p [Saccharomyces cerevisiae S288c]
gi|549795|sp|P36017.1|VPS21_YEAST RecName: Full=Vacuolar protein sorting-associated protein 21;
AltName: Full=GTP-binding protein YPT51; AltName:
Full=Vacuolar protein-targeting protein 12
gi|441477|emb|CAA82543.1| VPS21 product [Saccharomyces cerevisiae]
gi|483567|emb|CAA53769.1| ypt51p [Saccharomyces cerevisiae]
gi|1164935|emb|CAA64010.1| YOR3154c [Saccharomyces cerevisiae]
gi|1420257|emb|CAA99285.1| VPS21 [Saccharomyces cerevisiae]
gi|151945713|gb|EDN63954.1| small GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190407421|gb|EDV10688.1| vacuolar protein sorting-associated protein 21 [Saccharomyces
cerevisiae RM11-1a]
gi|207341191|gb|EDZ69312.1| YOR089Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272985|gb|EEU07949.1| Vps21p [Saccharomyces cerevisiae JAY291]
gi|259149571|emb|CAY86375.1| Vps21p [Saccharomyces cerevisiae EC1118]
gi|285814973|tpg|DAA10866.1| TPA: Vps21p [Saccharomyces cerevisiae S288c]
gi|323302866|gb|EGA56670.1| Vps21p [Saccharomyces cerevisiae FostersB]
gi|323307162|gb|EGA60445.1| Vps21p [Saccharomyces cerevisiae FostersO]
gi|323331470|gb|EGA72885.1| Vps21p [Saccharomyces cerevisiae AWRI796]
gi|323335502|gb|EGA76787.1| Vps21p [Saccharomyces cerevisiae Vin13]
gi|323346523|gb|EGA80810.1| Vps21p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352075|gb|EGA84612.1| Vps21p [Saccharomyces cerevisiae VL3]
gi|349581251|dbj|GAA26409.1| K7_Vps21p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763044|gb|EHN04575.1| Vps21p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296418|gb|EIW07520.1| Vps21p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 210
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD-- 128
F SL P Y R++ A++VYDV QSF+ W++E+ + D+II LVGNK D++
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 128
Query: 129 -KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V+ EEG+ A+E G++F ETSAK G N+ +F I +P
Sbjct: 129 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
>gi|315040105|ref|XP_003169430.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
gi|311346120|gb|EFR05323.1| GTP-binding protein ypt5 [Arthroderma gypseum CBS 118893]
Length = 216
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 130/210 (61%), Gaps = 16/210 (7%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L E TV+ ++WDT
Sbjct: 14 FAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDETTTVKFEIWDT 73
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 74 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 133
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP----GMETLS 177
LV DKR + + AKE G++F ETSAK N++ LF IA LP G L
Sbjct: 134 LVNESPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAKKLPLDQAGPRNLR 193
Query: 178 STKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+ + V+L+P S+ T QGG C+C
Sbjct: 194 ANPRP---GVDLRP--ESANT--QGGACSC 216
>gi|115454491|ref|NP_001050846.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|40538929|gb|AAR87186.1| putative small GTP-binding protein [Oryza sativa Japonica Group]
gi|108710277|gb|ABF98072.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113549317|dbj|BAF12760.1| Os03g0666500 [Oryza sativa Japonica Group]
gi|215692370|dbj|BAG87790.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695240|dbj|BAG90431.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 104/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + ++ L GNK DL++ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNSSTVVALAGNKADLLETR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QV IEE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 133 QVQIEEAKTYAQENGLFFMETSAKTATNVNDIFYEIAKRL 172
>gi|363753442|ref|XP_003646937.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890573|gb|AET40120.1| hypothetical protein Ecym_5362 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 128/212 (60%), Gaps = 14/212 (6%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
S +A KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + ++T++ ++WD
Sbjct: 3 SNVASIKLVLLGEAAVGKSSIVLRFVSNDFSENKEPTIGAAFLTQRVNMGNQTIKFEIWD 62
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYD+ QSF+ W++E+ + +II LVGNK
Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDITKPQSFIKARHWVKELHEQASKSIIIALVGNKL 122
Query: 125 DLV---DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME------T 175
DL+ ++R+V+ EE + A+E G++F ETSAK G N+ +F I +P +
Sbjct: 123 DLLESDEERKVAREEAESLAQEEGLLFFETSAKTGDNVNEVFLGIGEKIPLKQQEVQNGN 182
Query: 176 LSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
+S + VD+N+ + ++ + GC C
Sbjct: 183 GASVNEVSRVDLNVAGSSGANSS-----GCNC 209
>gi|327298001|ref|XP_003233694.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326463872|gb|EGD89325.1| RAB GTPase [Trichophyton rubrum CBS 118892]
gi|326470113|gb|EGD94122.1| RAB GTPase [Trichophyton tonsurans CBS 112818]
gi|326484352|gb|EGE08362.1| GTP-binding protein ypt5 [Trichophyton equinum CBS 127.97]
Length = 216
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 135/223 (60%), Gaps = 23/223 (10%)
Query: 1 MASVSP-------LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL 53
MA+ +P A++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L
Sbjct: 1 MAARAPGGRTSARFAQFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISL 60
Query: 54 -EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERG 112
E TV+ ++WDTAGQER++SL P Y R+++ AV+VYD+ S W++E++ +
Sbjct: 61 DETTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQAN 120
Query: 113 GDVIIVLVGNKTDLV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAA 168
++II L GNK DLV DKR + + AKE G++F ETSAK N++ LF IA
Sbjct: 121 ENIIIALAGNKLDLVNESPDKRAIETADAAAYAKEAGLLFFETSAKTSTNVRELFTAIAK 180
Query: 169 ALP----GMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
LP G L + + V+L+P S+ T QGG C+C
Sbjct: 181 KLPLDQAGPRNLRANPRP---GVDLRP--ESANT--QGGACSC 216
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 7/198 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N +SF N ++W+ + DV+ +++GNK D+ D+
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS E G+ A++ G+ F ETSAK ++ F +A A+ K D +
Sbjct: 130 RVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILA-------KMPDSTEEQS 182
Query: 190 KPTVNSSQTEQQGGGCAC 207
+ TVN Q ++ GG C
Sbjct: 183 RDTVNPVQPQRTGGSGGC 200
>gi|156095051|ref|XP_001613561.1| small GTPase Rab5c [Plasmodium vivax Sal-1]
gi|148802435|gb|EDL43834.1| small GTPase Rab5c, putative [Plasmodium vivax]
Length = 214
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 104/161 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+RSL P Y R +S AVIVYD+ N++SF WI E+++ D+II L GNK DL R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKKDLEKNR 148
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
V E + A ++FIETSAK G N+ LF +IA LP
Sbjct: 149 VVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP 189
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 7/198 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N +SF N ++W+ + DV+ +++GNK D+ D+
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS + G+ A++ G+ F ETSAK ++ F +A A+ K D D
Sbjct: 130 RVVSKDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILA-------KMPDSTDEQS 182
Query: 190 KPTVNSSQTEQQGGGCAC 207
+ T+N Q ++ GG C
Sbjct: 183 RDTINPVQPQRPGGSGGC 200
>gi|348505868|ref|XP_003440482.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 207
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 117/182 (64%), Gaps = 2/182 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD+ N +SF N WI + DV +++GNK D+ D+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDICNEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDR 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVS + G+ A ++GV F+ETSAK+G N++ F + + + LSS ++ +
Sbjct: 129 RQVSKDRGEKLAIDYGVKFLETSAKSGLNVEEAFYTMGRDI--LHNLSSKSTDNSAGGSG 186
Query: 190 KP 191
KP
Sbjct: 187 KP 188
>gi|226531049|ref|NP_001149278.1| LOC100282900 [Zea mays]
gi|195625976|gb|ACG34818.1| ras-related protein RHN1 [Zea mays]
gi|223949965|gb|ACN29066.1| unknown [Zea mays]
gi|413957021|gb|AFW89670.1| Ras protein RHN1 [Zea mays]
Length = 200
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 32 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ A++VYD+ + +SF W++E++ +++VLVGNK DL
Sbjct: 92 QERYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVGNKADLH 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
D R VS ++ A++ + FIETSAK NI LF +IA LP
Sbjct: 152 DNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 122/199 (61%), Gaps = 7/199 (3%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+S++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQE
Sbjct: 38 FKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 97
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R + ++VYDV + +SF N +W+ E+ +V +LVGNK DL K
Sbjct: 98 RFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYAAENVNKLLVGNKCDLEGK 157
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R V+ E+G A G+ F+ETSAK N++ F +A+ + + K +
Sbjct: 158 RVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIK-----ARMKNQPSAAPAT 212
Query: 190 KPTVN--SSQTEQQGGGCA 206
KP VN S Q +++GGGC
Sbjct: 213 KPGVNLRSQQVKKEGGGCC 231
>gi|242036893|ref|XP_002465841.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
gi|241919695|gb|EER92839.1| hypothetical protein SORBIDRAFT_01g046830 [Sorghum bicolor]
Length = 200
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 32 RAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIWDTAG 91
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R ++ A++VYD+ + +SF W++E++ +++VLVGNK DL
Sbjct: 92 QERYAALAPLYYRGAAAAIVVYDITSPESFSKAQYWVKELQKHGSPGIVMVLVGNKADLH 151
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
D R VS ++ A++ + FIETSAK NI LF +IA LP
Sbjct: 152 DNRSVSSQDAQDYAEKNNMFFIETSAKTADNINQLFEEIAKRLP 195
>gi|125580167|gb|EAZ21313.1| hypothetical protein OsJ_36965 [Oryza sativa Japonica Group]
gi|218187297|gb|EEC69724.1| hypothetical protein OsI_39224 [Oryza sativa Indica Group]
Length = 198
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 104/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D+V+ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QV EE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|221052324|ref|XP_002257738.1| Rab5c GTPase [Plasmodium knowlesi strain H]
gi|193807569|emb|CAQ38074.1| Rab5c GTPase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 104/161 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD SVGK+ I+ RF ++F ++TIG F+++ + + + T++ ++WDTAGQER
Sbjct: 29 KLVLLGDTSVGKSCIVVRFAKNEFYEYQESTIGAAFMTQLIDIGECTIKFEIWDTAGQER 88
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+RSL P Y R +S AVIVYD+ N++SF WI E+++ D+II L GNK DL R
Sbjct: 89 YRSLAPMYYRGASAAVIVYDITNKKSFEGAKGWIHELKSVHSNDIIIALAGNKKDLEKNR 148
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
V E + A ++FIETSAK G N+ LF +IA LP
Sbjct: 149 VVDRELAESFANSNNILFIETSAKTGQNVNELFLRIAKKLP 189
>gi|149235389|ref|XP_001523573.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452982|gb|EDK47238.1| vacuolar protein sorting-associated protein 21 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 221
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 19/213 (8%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + DRT++ ++WD
Sbjct: 6 APATAVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTIGDRTIKYEIWD 65
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQERF SL P Y R++ A++VYD+ SF+ W++E+ + D+II LVGNK
Sbjct: 66 TAGQERFASLAPMYYRNAQAAIVVYDITKPASFIKARHWVKELHEQANRDIIIALVGNKY 125
Query: 125 DLVDK---------------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAA 169
DLV+ R+VS EEG A E G++F ETSAK +N+ +F I
Sbjct: 126 DLVEDEPELESAAEGNTDLLRKVSKEEGQALADEEGLLFFETSAKTSYNVNDVFVAIGGK 185
Query: 170 LPGME----TLSSTKQEDMVDVNLKPTVNSSQT 198
+P ST + +D++ P ++++
Sbjct: 186 IPETNLSRGAQESTNEGGRIDLSTNPNAGATRS 218
>gi|432911409|ref|XP_004078665.1| PREDICTED: ras-related protein Rab-31-like [Oryzias latipes]
Length = 194
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K+ LGD VGK+SI+ RF+ D FD TIG FL+KT+ + + +WDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQER 66
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
F SL P Y R S+ AVIVYD+ SF +W++E++ D+++ + GNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDLGDIR 126
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLK 190
+V ++E A+ +FIETSA+ N++ LF+KI+ +P +E D +N +
Sbjct: 127 EVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQIPPLEN-PEADSNDSFKLNRQ 185
Query: 191 PT 192
PT
Sbjct: 186 PT 187
>gi|405964683|gb|EKC30136.1| Ras-related protein Rab-3 [Crassostrea gigas]
Length = 219
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 120/198 (60%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +G+ SVGKTS + R+ D F + + +T+GIDF KT++ +D+ V+LQ+WDTAGQE
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKLQIWDTAGQE 81
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
R+R++ +Y R + +++YDV N +SF W +++T + +VLVGNK DL D+
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNAVMDWCTQIKTYSWDNAQVVLVGNKCDLEDE 141
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS E G A + G+ F ETSAK N+K +F ++ + + S + +V+
Sbjct: 142 RVVSTERGKQLADQIGLEFFETSAKENINVKAVFERLVDIICDKMSESLDQDPSLVNSQT 201
Query: 190 KPTVNSSQTEQQGGGCAC 207
K T + T +GG C C
Sbjct: 202 KGTRLTENTAPEGGSCQC 219
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 108/158 (68%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYDV N +SF N WI + DV +L+GNK +L+DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNKCELIDK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RQV+ E G+ A E+G+ F+ETSAK+ N++ F +A
Sbjct: 129 RQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLA 166
>gi|296878|emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 200
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 110/164 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLLLRFVKGQFIEFQESTIGAAFFSQTVAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IV+D+ N+ SF +W++E++ + ++++ L GNK DL+D R
Sbjct: 72 YHSLPPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGME 174
+V+ EE A+E G+ F+ETSAK N+ +F +IA LP ++
Sbjct: 132 KVAAEEAQTYAQENGLFFMETSAKTASNVNDIFYEIANRLPRLQ 175
>gi|115482198|ref|NP_001064692.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|78708729|gb|ABB47704.1| Ras-related protein RHN1, putative, expressed [Oryza sativa
Japonica Group]
gi|113639301|dbj|BAF26606.1| Os10g0441800 [Oryza sativa Japonica Group]
gi|215687260|dbj|BAG91825.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765709|dbj|BAG87406.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 250
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ LED T V+ ++WDTAG
Sbjct: 82 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAG 141
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R + A++VYD+ + +SF W++E++ D+I+ LVGNK DL
Sbjct: 142 QERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKELQKHGSPDMIMALVGNKADLH 201
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
D R VS ++ A+ + FIETSAK NI LF +IA LP
Sbjct: 202 DNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEIAKRLP 245
>gi|171694842|ref|XP_001912345.1| hypothetical protein [Podospora anserina S mat+]
gi|170947663|emb|CAP59825.1| unnamed protein product [Podospora anserina S mat+]
Length = 219
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 129/207 (62%), Gaps = 9/207 (4%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYL-EDRTVRLQLWDT 65
A++KLV LG+ +VGK+SI+ RF+ D+FD+ ++TIG FL++T+ L E+ TV+ ++WDT
Sbjct: 16 FAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDT 75
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQER++SL P Y R+++ AV+VYD+ S W++E++ + ++II L GNK D
Sbjct: 76 AGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNKLD 135
Query: 126 LV----DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMET-LSSTK 180
LV DKR + E + AKE G++F ETSAK N++ LF IA LP + +
Sbjct: 136 LVTEQPDKRAIPTAEAEAYAKEAGLLFFETSAKTAENVQELFTAIAKKLPLDQVGPRHAR 195
Query: 181 QEDMVDVNLKPTVNSSQTEQQGGGCAC 207
V+L P ++Q GG CAC
Sbjct: 196 PGQRPGVSLAPEGANTQA---GGPCAC 219
>gi|171686920|ref|XP_001908401.1| hypothetical protein [Podospora anserina S mat+]
gi|170943421|emb|CAP69074.1| unnamed protein product [Podospora anserina S mat+]
Length = 231
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 124/229 (54%), Gaps = 33/229 (14%)
Query: 6 PLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDT 65
P + KLV LG+ +VGK+S++ RF+ + F + TIG FL++ L RT++ ++WDT
Sbjct: 9 PSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCNLPTRTIKFEIWDT 68
Query: 66 AGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTD 125
AGQERF SL P Y R++ A++VYD+ S + W+ E++ + ++I LVGNK D
Sbjct: 69 AGQERFASLAPMYYRNAQAALVVYDLTKPTSLIKAKHWVAELQRQASPGIVIALVGNKLD 128
Query: 126 LV-----------------DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAA 168
L D R+V+ EE A+E G++F ETSAK G+N+ +F IA
Sbjct: 129 LTNDSAGGDGEGAGVGDGEDARKVTTEEAKSYAEEEGLLFFETSAKTGYNVTEVFTAIAN 188
Query: 169 AL----------PGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGGCAC 207
A+ PG + ++ +E V++N N+ + GCAC
Sbjct: 189 AIPETSLKTARGPGASSAAARTEEQRVNLNGPRDPNAKE------GCAC 231
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 3/184 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K++ +GD VGK+ ++ RF D + +Y +TIG+DF KT+ +ED+ ++LQ+WDTAGQE
Sbjct: 9 FKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R + +IVYDV +R SF N WI E+ DV VL+GNK DL +
Sbjct: 69 RFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKVLIGNKIDLKND 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS EEG A + F+ETSAK N++ F+ +A + L + +Q+ V++NL
Sbjct: 129 RNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLEN-QQKGRVNINL 187
Query: 190 --KP 191
KP
Sbjct: 188 NAKP 191
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 104/160 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D+++ R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMIEAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QV EE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 133 QVPAEEARTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|156387431|ref|XP_001634207.1| predicted protein [Nematostella vectensis]
gi|156221287|gb|EDO42144.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 108/161 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGK+S++ RF D F TY +TIG+DF +T+ ++ +T++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR+L +Y R + V++YDV ++FL+ S+W+EEV V +LVGNK DL+D
Sbjct: 69 RFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDC 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
RQV A++ + FIETSAK N++ +FR +AA L
Sbjct: 129 RQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAEL 169
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 6/204 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD VGK+ ++ RF D F +Y TIG+DF +T+ +++ V+LQ+WDTAGQE
Sbjct: 14 FKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDTAGQE 73
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + V+VYDV +R SF + W+ EV + +LVGNK + D
Sbjct: 74 RFRTITSAYYRGADGIVLVYDVTDRDSFGHVDEWLAEVNRYANENTCKILVGNKCEKADD 133
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSS-----TKQEDM 184
RQVS EEG KA+E G+ FIETSAK N+ F +A L M+ +S +
Sbjct: 134 RQVSAEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELIKMKQSASAAGGRSAGPQG 193
Query: 185 VDVNLKPT-VNSSQTEQQGGGCAC 207
+ + +PT + Q+ G C+C
Sbjct: 194 MRIASQPTGAENRAMAQRSGNCSC 217
>gi|47210398|emb|CAF91320.1| unnamed protein product [Tetraodon nigroviridis]
Length = 210
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 108/165 (65%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 11 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA 70
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F W++E++ + +++I L GNK D+
Sbjct: 71 GQERYHSLAPMYYRGAQAAIVVYDITNSDTFARAKNWVKELQRQASPNIVIALAGNKADI 130
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+KR V +E A + ++F+ETSAK N+ +F IA LP
Sbjct: 131 TNKRAVEHQEAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLP 175
>gi|225466271|ref|XP_002272169.1| PREDICTED: ras-related protein Rab5 [Vitis vinifera]
gi|147795279|emb|CAN67253.1| hypothetical protein VITISV_014431 [Vitis vinifera]
Length = 200
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 106/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + +SF +W++E++ + ++++ L GNK DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ F ETSAK N+ F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLP 172
>gi|50754287|ref|XP_414313.1| PREDICTED: ras-related protein Rab-43 [Gallus gallus]
Length = 215
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 123/202 (60%), Gaps = 11/202 (5%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD SVGKT ++ RF F +TIG+DF K++ ++ + V+LQ+WDTAGQE
Sbjct: 21 FKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKLQIWDTAGQE 80
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R ++ A++ YD++ R SFL+ RWIE+VR G +++ +L+GNK+DL D
Sbjct: 81 RFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIGNKSDLSDL 140
Query: 130 RQVSIEEGDGKAKEFG--VMFIETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQEDMV 185
R+V +EE A+ + + IETSAK N++ F K+A L + S K D +
Sbjct: 141 REVQLEEAQSLAERYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPMFSEKNTDSI 200
Query: 186 DVNLKPTVNSSQTEQQGGGCAC 207
++ K V +G GC C
Sbjct: 201 KLDSKDVV-------EGWGCGC 215
>gi|221123404|ref|XP_002154758.1| PREDICTED: ras-related protein Rab-22A-like [Hydra magnipapillata]
Length = 196
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 122/204 (59%), Gaps = 11/204 (5%)
Query: 3 SVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQL 62
S +P+ + KL LGD VGK+S++ RF+ D+FD ATIG F+SKT+ L + + + Q+
Sbjct: 2 SYNPMREIKLCLLGDSGVGKSSLVLRFVTDRFDIQSTATIGASFMSKTISLGENSYKYQI 61
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGN 122
WDTAGQE+++SL P Y R ++ A++VYD+ +F + W+ E+R ++I + GN
Sbjct: 62 WDTAGQEKYKSLAPMYYRGAAAAIVVYDLTVENTFKSVKTWVRELRELGPPGLVIAIAGN 121
Query: 123 KTDLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQE 182
K+DL D+R+VS+E G+ A E G +F E SA N+ +F++I LP +
Sbjct: 122 KSDLKDQREVSLEAGENYASEIGAVFAEVSALTSQNVAYIFQEITKKLP------EESSQ 175
Query: 183 DMVDVNLKPTVNSSQTEQQGGGCA 206
+ + +LK +QT + GGC
Sbjct: 176 YIQNFDLK-----NQTIKSKGGCC 194
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 107/161 (66%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + SF +W++E++ + ++++ L GNK DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ F+ETSAK N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTASNVNDIFYEIAKRLP 172
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 107/158 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYDV N +SF N WI + DV +L+GNK +L +K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RQVS E G+ A E+G+ F+ETSAK+ N++ F +A
Sbjct: 129 RQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLA 166
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 107/158 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYDV N +SF N WI + DV +L+GNK +L +K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RQVS E G+ A E+G+ F+ETSAK+ N++ F +A
Sbjct: 129 RQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLA 166
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 107/158 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYDV N +SF N WI + DV +L+GNK +L +K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RQVS E G+ A E+G+ F+ETSAK+ N++ F +A
Sbjct: 129 RQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLA 166
>gi|89258417|gb|ABD65432.1| Rab5 [Suberites domuncula]
Length = 207
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 107/161 (66%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
+ ++KLV LG+ +VGK+S++ RF+ +F ++TIG FL++T+ L+D TV+ ++WDTA
Sbjct: 19 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVNLDDTTVKFEIWDTA 78
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+ SL P Y R + A++VYD+ N +F+ W++E++ + +++I L GNK DL
Sbjct: 79 GQERYHSLAPMYYRGAQAAIVVYDITNNDTFVRAKSWVKELQRQASPNIVIALAGNKADL 138
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
KR V EE A+E ++F+ETSAK N+ +F IA
Sbjct: 139 ASKRMVDFEEAHVYAEENSLLFMETSAKTAMNVNDIFLAIA 179
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 107/158 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYDV N +SF N WI + DV +L+GNK +L +K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTEK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RQVS E G+ A E+G+ F+ETSAK+ N++ F +A
Sbjct: 129 RQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLA 166
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 117/182 (64%), Gaps = 2/182 (1%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYD +N +SF N WI + DV +++GNK D+ D+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDTSNEKSFENIKNWIRNIEEHASSDVEKMILGNKCDMTDR 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
RQVS + G+ A ++GV F+ETSAK+G N++ F +A + + LSS + +
Sbjct: 129 RQVSKDRGEKLAIDYGVKFMETSAKSGLNVEEAFYTMARDI--LHNLSSKTTDSGAGGSG 186
Query: 190 KP 191
KP
Sbjct: 187 KP 188
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 120/192 (62%), Gaps = 5/192 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F TT+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N +SF N +W+ + DV +++GNK D+ DK
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMSDK 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVD--- 186
R VS E G+ A+E G+ F+ETSAKA NI F +A A+ ++ + + D VD
Sbjct: 130 RTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAI--LDKTAGREPGDHVDRVL 187
Query: 187 VNLKPTVNSSQT 198
V+ K N+S++
Sbjct: 188 VDRKQQSNTSRS 199
>gi|168068031|ref|XP_001785900.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662426|gb|EDQ49283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
+ KLV LGD VGK+ I+ RF+ +FD + + T+G FLS+T+ L+D T++ ++WDTAGQ
Sbjct: 32 RIKLVLLGDSGVGKSCILLRFVRGQFDPSSKVTVGASFLSQTINLQDSTIKFEIWDTAGQ 91
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+ SL P Y R +S AV+VYD+ N ++FL W++E++ D+++ LVGNK DL
Sbjct: 92 ERYSSLAPLYYRGASAAVVVYDITNPETFLKAQFWVKELQKHGNPDIVMALVGNKADLES 151
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP-GMETLS 177
+R+VS EE A+ G+ FIETSAK N+ LF +IA LP G +LS
Sbjct: 152 EREVSREEALAYAESNGMFFIETSAKTADNVNQLFEEIAKRLPRGQSSLS 201
>gi|118482090|gb|ABK92976.1| unknown [Populus trichocarpa]
Length = 200
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 108/160 (67%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD++N+ SF +W++E++ + ++++ L GNK DL+D R
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
+V+ EE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 132 KVAAEEAQVFAQENGLFFMETSAKTATNVNDIFYEIAKRL 171
>gi|291232375|ref|XP_002736136.1| PREDICTED: RAS-related protein RAB-22A-like [Saccoglossus
kowalevskii]
Length = 178
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 100/156 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KL LGD VGK+S++ RF+ D F+T Q TIG F+SKT+ ++D++ + Q+WDTAGQE+
Sbjct: 7 KLCLLGDSGVGKSSLVQRFVSDTFNTHSQPTIGASFMSKTLVVDDQSYKFQIWDTAGQEK 66
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+R L P Y R ++ A+IVYD+ SF W+ E+ GDV++ + GNK DLVD+R
Sbjct: 67 YRGLAPMYYRGAAAAIIVYDITRESSFSAVKMWVRELEQYGPGDVVLAIAGNKADLVDQR 126
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKI 166
+V+ +E A + F+ETSAK N+ LF I
Sbjct: 127 EVTYDEAHKYADQINATFVETSAKTAVNVTQLFTAI 162
>gi|55962807|emb|CAI11701.1| RAB5A member RAS oncogene family [Danio rerio]
Length = 180
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%)
Query: 5 SPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
+ + ++KLV LGD +VGK+S++ RF+ +FD + TIG FL++++ L+D TV+ ++WD
Sbjct: 16 TKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEIWD 75
Query: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKT 124
TAGQER+ SL P Y R + A++V+D+ ++F W++E++ + +++I L GNK
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQASPNIVIALAGNKA 135
Query: 125 DLVDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKI 166
DL DKR V EE A++ G++F+ETSAK N+ LF I
Sbjct: 136 DLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAI 177
>gi|156083945|ref|XP_001609456.1| Ras-related protein Rab-5 [Babesia bovis T2Bo]
gi|154796707|gb|EDO05888.1| Ras-related protein Rab-5 [Babesia bovis]
Length = 222
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 111/163 (68%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
++KLV LGD SVGK+S++ RF+ + F ++TIG F+++++ L+D TV+ ++WDTAGQ
Sbjct: 32 QFKLVILGDTSVGKSSLVGRFVKNTFLEFQESTIGAAFMTQSVSLDDCTVKFEIWDTAGQ 91
Query: 69 ERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD 128
ER+R+L P Y R SS AVIVYD+ R+SF WI+E++ G +V++ L GNK DL
Sbjct: 92 ERYRTLAPMYYRGSSAAVIVYDITMRESFQQAKGWIQELQAHVGPNVVLALAGNKVDLDS 151
Query: 129 KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
R+VS E + A +F+ETSAK G ++ LF +IA A+P
Sbjct: 152 SREVSREVAEEFAGANNCIFMETSAKNGDMVQELFTEIAKAIP 194
>gi|260946147|ref|XP_002617371.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
gi|238849225|gb|EEQ38689.1| hypothetical protein CLUG_02815 [Clavispora lusitaniae ATCC 42720]
Length = 213
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 122/221 (55%), Gaps = 22/221 (9%)
Query: 1 MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60
M+ +P KLV LG+ +VGK+S++ RF+ + F + TIG FL++ + DRT++
Sbjct: 1 MSFPAPATSVKLVLLGEAAVGKSSLVLRFVSNDFQENKEPTIGAAFLTQKCTVGDRTIKY 60
Query: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLV 120
++WDTAGQERF SL P Y R++ A++VYD+ SF+ W++E+ + D+ I LV
Sbjct: 61 EIWDTAGQERFASLAPMYYRNAQAALVVYDITKPASFIKARHWVKELHEQAAKDITIALV 120
Query: 121 GNKTDLVDK--------RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLF----RKIAA 168
GNK DLV R+VS+ EG A+E G++F ETSAK N+ +F KI
Sbjct: 121 GNKYDLVAADNDTDESLRKVSVAEGQALAEEEGLLFFETSAKTSHNVNDVFVAIGSKIPE 180
Query: 169 ALPGMETLSSTKQEDMVDVNLKPTVNSSQTEQQGGG--CAC 207
A P ET + +D+ S Q+ G CAC
Sbjct: 181 AKPADETPGPRGESGRIDL--------SGNGQRSGASDCAC 213
>gi|12311680|emb|CAC24475.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 196
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 106/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K V LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 8 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 67
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + SF +W++E++ + ++++ L GNK DL DKR
Sbjct: 68 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 127
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ F+ETSAK N+ +F +IA LP
Sbjct: 128 EVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLP 168
>gi|302694753|ref|XP_003037055.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
gi|300110752|gb|EFJ02153.1| hypothetical protein SCHCODRAFT_64045 [Schizophyllum commune H4-8]
Length = 208
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 67
++KLV LG+ +VGK+S++ RF+ D+FD ++TIG FL++T+ L+D TV+ ++WDTAG
Sbjct: 6 QFKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTVTLDDGTTVKFEIWDTAG 65
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER++SL P Y R+++ AV+VYD+ S WI E++ + ++I L GNK DL
Sbjct: 66 QERYKSLAPMYYRNANCAVVVYDITQSTSLEKARTWIRELQRQADPSIVIALCGNKADLA 125
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+RQV+ EE A+E G+M+ ETSAK G + +F IA LP
Sbjct: 126 ARRQVTQEEAQKYAEEEGLMWGETSAKTGEGVADIFTAIAKKLP 169
>gi|348677560|gb|EGZ17377.1| hypothetical protein PHYSODRAFT_346157 [Phytophthora sojae]
Length = 197
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTA 66
+KLV LGD +VGK+ ++ RF+ D+F + TIG FL++T+ LED TV+ ++WDTA
Sbjct: 7 CHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTA 66
Query: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDL 126
GQER+RSL P Y R ++ A++VYDV N+ SF W++E++ +V+I L GNK DL
Sbjct: 67 GQERYRSLAPMYYRGAAAAIVVYDVTNKDSFTGAKSWVKELQRRGDPNVVIALAGNKADL 126
Query: 127 VDKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V EE A++ ++ +ETSAK N+K LF IA LP
Sbjct: 127 EARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLP 171
>gi|401623607|gb|EJS41700.1| vps21p [Saccharomyces arboricola H-6]
Length = 210
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVD-- 128
F SL P Y R++ A++VYDV QSF+ W++E+ + D+II LVGNK D++
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKVDMLQEG 128
Query: 129 -KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+R+V+ EEG+ A+E G++F ETSAK G N+ +F I +P
Sbjct: 129 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172
>gi|402887099|ref|XP_003906942.1| PREDICTED: ras-related protein Rab-43 isoform 1 [Papio anubis]
gi|402887101|ref|XP_003906943.1| PREDICTED: ras-related protein Rab-43 isoform 2 [Papio anubis]
Length = 212
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 121/201 (60%), Gaps = 10/201 (4%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KLV +GD SVGKT ++ RF F +TIG+DF KT+ ++ + V+LQ+WDTAGQE
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ SY R ++ A++ YD+ R SFL+ WIE+VR G +++ +L+GNK+DL +
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGFNIVQLLIGNKSDLSEL 138
Query: 130 RQVSIEEGDGKAKEFGVMF-IETSAKAGFNIKPLFRKIAAALPGME--TLSSTKQEDMVD 186
R+VS+ E A+ + ++ IETSAK N++ F ++A L L S K D +
Sbjct: 139 REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSEKSPDHIQ 198
Query: 187 VNLKPTVNSSQTEQQGGGCAC 207
+N K +G GC C
Sbjct: 199 LNSKDI-------GEGWGCGC 212
>gi|145332843|ref|NP_001078287.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|222423401|dbj|BAH19672.1| AT3G54840 [Arabidopsis thaliana]
gi|332645778|gb|AEE79299.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 193
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67
+ KLV LGD VGK+ I+ RF+ +FD T + T+G FLS+T+ L+D T V+ ++WDTAG
Sbjct: 33 RVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 92
Query: 68 QERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLV 127
QER+ +L P Y R + VAVIVYD+ + +SF W++E++ D+++ LVGNK DL
Sbjct: 93 QERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 128 DKRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFR 164
+KR+V E+G A++ G+ FIETSAK NI LF
Sbjct: 153 EKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFE 189
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 5/196 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F TT+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N ++F N +W+ + DV +++GNK+D+ +K
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMILGNKSDMEEK 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS E+G+ A+E G+ F+ETSAKA NI F ++A A+ L T ++ D
Sbjct: 130 RVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAI-----LDKTHGKEPQDAAD 184
Query: 190 KPTVNSSQTEQQGGGC 205
+ TVN + C
Sbjct: 185 RVTVNIPRERNSNRCC 200
>gi|403346064|gb|EJY72416.1| RAB-2,4,14, putative [Oxytricha trifallax]
Length = 222
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+K + +GD VGK+ ++ +F +F + TIG++F ++T+ ++++ ++LQ+WDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFRQQHDLTIGVEFGARTVQIQNKNIKLQIWDTAGQE 66
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
F+S+ SY R ++ A++VYD+ R +F + +RW+EEVR D+ I+L+GNK DL +
Sbjct: 67 SFKSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEVRQNGNPDMTIMLIGNKCDLDAR 126
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL-----PGMETLSSTK 180
RQVS EEG+ AKE G++F ETSAK FN++ F + + + GM LSS K
Sbjct: 127 RQVSFEEGERFAKENGLIFTETSAKTAFNVEEAFLQTSQMIYENIDKGMYDLSSEK 182
>gi|413933483|gb|AFW68034.1| putative GTP-binding protein [Zea mays]
Length = 199
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 102/156 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D++D R
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKI 166
QV EE A+E G+ F+ETSAK N+ +F +I
Sbjct: 133 QVPAEEAKAYAQENGLFFMETSAKTAINVNDIFYEI 168
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 108/161 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F TT+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N ++F N W+ + +V +++GNK+D+ D+
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNEKTFENIVNWLRNIDEHANENVEKMILGNKSDMEDR 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
R+VS E G+ A+E G+ F+ETSAKA NI FR++A A+
Sbjct: 130 REVSTERGEAIAREHGIRFMETSAKANINIDRAFRELAEAI 170
>gi|12311682|emb|CAC24476.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 106/161 (65%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
K V LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 12 KFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ SL P Y R ++ A+IVYD+ + SF +W++E++ + ++++ L GNK DL DKR
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMALAGNKADLEDKR 131
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALP 171
+V+ EE A+E G+ F+ETSAK N+ +F +IA LP
Sbjct: 132 KVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLP 172
>gi|410074687|ref|XP_003954926.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
gi|372461508|emb|CCF55791.1| hypothetical protein KAFR_0A03560 [Kazachstania africana CBS 2517]
Length = 207
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 114/173 (65%), Gaps = 9/173 (5%)
Query: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDR----TVRLQL 62
+ ++KLV LGD SVGK+SI+ RF+ D F+ ++TIG FLS+T+ L D V+ ++
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVNRFVKDSFEDLRESTIGAAFLSQTIKLNDNGKEVIVKFEI 60
Query: 63 WDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGD-VIIVLVG 121
WDTAGQER++SL P Y R+++ A++VYD+ S W+EE++ + G D ++I LVG
Sbjct: 61 WDTAGQERYKSLAPMYYRNANAALVVYDITELDSLNKAKTWVEELKNKVGDDNIVIYLVG 120
Query: 122 NKTDLVD----KRQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
NK D+ + KR VS+E AKE G++FIETSAK G NIK F++I L
Sbjct: 121 NKLDVCEKDSSKRLVSLEGAKEYAKEQGLLFIETSAKTGANIKETFQEIGEKL 173
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 121/199 (60%), Gaps = 9/199 (4%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT I+ RF D F+TT+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RF ++ SY R + ++VYD+ N +SF N ++W+ + DV+ +++GNK D+ D+
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 129
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNL 189
R VS E G+ A++ G+ F ETSAK ++ F +A A+ K + D
Sbjct: 130 RVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILA-------KMPESTDEQS 182
Query: 190 KPTVNSSQTEQQG--GGCA 206
+ TVN Q ++ G GGC
Sbjct: 183 RDTVNPVQPQRPGSSGGCC 201
>gi|13774086|gb|AAK38149.1| small GTP-binding protein [Oryza sativa]
Length = 203
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 103/160 (64%)
Query: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
KLV LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKR 130
+ L P Y R ++ A++VYD+ N SF +W++E++ + + I+ L GNK D+V+ R
Sbjct: 73 YHGLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEAR 132
Query: 131 QVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAAL 170
QV EE A+E G+ F+ETSAK N+ +F +IA L
Sbjct: 133 QVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRL 172
>gi|449518960|ref|XP_004166503.1| PREDICTED: ras-related protein RABF2b-like, partial [Cucumis
sativus]
Length = 186
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 113/167 (67%)
Query: 13 VFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 72
V LGD GK+S++ RF+ +F ++TIG F S+T+ + D TV+ ++WDTAGQER+
Sbjct: 1 VLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 60
Query: 73 SLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDKRQV 132
SL P Y R ++ A+IVYD+ N+ SF +W++E++ + ++++ L GNK+DL+D R+V
Sbjct: 61 SLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSRKV 120
Query: 133 SIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIAAALPGMETLSST 179
+ E+ A+E G+ F+ETSAK+ N+ +F +IA LP ++ + +T
Sbjct: 121 AAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 167
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 106/158 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYDV N +SF N WI + DV +L+GNK +L K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTSK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RQVS E G+ A E+G+ F+ETSAK+ N++ F +A
Sbjct: 129 RQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLA 166
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 106/158 (67%)
Query: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
+KL+ +GD VGKT ++ RF D F+TT+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 70 RFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSRWIEEVRTERGGDVIIVLVGNKTDLVDK 129
RFR++ +Y R + ++VYDV N +SF N WI + DV +L+GNK +L K
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNKCELTSK 128
Query: 130 RQVSIEEGDGKAKEFGVMFIETSAKAGFNIKPLFRKIA 167
RQVS E G+ A E+G+ F+ETSAK+ N++ F +A
Sbjct: 129 RQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLA 166
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,949,396,473
Number of Sequences: 23463169
Number of extensions: 111212479
Number of successful extensions: 335753
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17064
Number of HSP's successfully gapped in prelim test: 7923
Number of HSP's that attempted gapping in prelim test: 298233
Number of HSP's gapped (non-prelim): 25975
length of query: 207
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 71
effective length of database: 9,168,204,383
effective search space: 650942511193
effective search space used: 650942511193
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)