Query 028547
Match_columns 207
No_of_seqs 145 out of 1836
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 22:07:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pxx_A Uncharacterized protein 99.9 8.1E-24 2.8E-28 157.7 14.1 172 8-181 2-184 (215)
2 2gb4_A Thiopurine S-methyltran 99.9 7.6E-23 2.6E-27 156.5 13.1 145 7-158 27-192 (252)
3 1pjz_A Thiopurine S-methyltran 99.8 9.3E-21 3.2E-25 140.5 11.6 115 36-157 11-140 (203)
4 4hg2_A Methyltransferase type 99.8 6.7E-21 2.3E-25 146.0 9.9 112 35-161 28-139 (257)
5 3g5l_A Putative S-adenosylmeth 99.8 1.9E-20 6.6E-25 143.1 11.0 103 47-158 44-146 (253)
6 3lcc_A Putative methyl chlorid 99.8 2.8E-20 9.7E-25 140.7 10.7 139 13-160 33-174 (235)
7 3l8d_A Methyltransferase; stru 99.8 4.9E-20 1.7E-24 139.8 12.0 118 33-161 40-157 (242)
8 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.2E-19 4E-24 139.4 13.8 112 39-159 63-180 (261)
9 2p7i_A Hypothetical protein; p 99.8 3.1E-20 1.1E-24 141.1 10.2 101 49-161 44-145 (250)
10 2xvm_A Tellurite resistance pr 99.8 1E-18 3.6E-23 128.4 15.4 132 9-158 4-137 (199)
11 3hnr_A Probable methyltransfer 99.8 4.1E-19 1.4E-23 132.8 12.8 116 34-159 32-147 (220)
12 3h2b_A SAM-dependent methyltra 99.8 2.8E-19 9.5E-24 132.2 11.0 115 37-161 31-145 (203)
13 3ofk_A Nodulation protein S; N 99.8 5.2E-19 1.8E-23 132.0 12.3 141 11-159 12-156 (216)
14 1vl5_A Unknown conserved prote 99.8 5.1E-19 1.8E-23 135.7 12.1 115 35-158 25-141 (260)
15 3sm3_A SAM-dependent methyltra 99.8 5.7E-19 2E-23 133.0 11.9 135 13-160 3-144 (235)
16 2a14_A Indolethylamine N-methy 99.8 1E-19 3.4E-24 140.1 7.5 147 9-158 14-198 (263)
17 3ujc_A Phosphoethanolamine N-m 99.8 1.3E-18 4.5E-23 133.5 12.4 115 39-160 47-162 (266)
18 3dtn_A Putative methyltransfer 99.8 1.9E-18 6.4E-23 130.5 12.8 106 48-160 45-151 (234)
19 3dlc_A Putative S-adenosyl-L-m 99.8 5.5E-19 1.9E-23 131.7 9.5 142 3-158 2-149 (219)
20 2kw5_A SLR1183 protein; struct 99.8 1.7E-18 5.7E-23 127.9 11.6 133 15-161 1-135 (202)
21 1xtp_A LMAJ004091AAA; SGPP, st 99.8 1.9E-18 6.4E-23 131.9 12.2 115 38-158 84-198 (254)
22 4htf_A S-adenosylmethionine-de 99.8 1.8E-18 6.2E-23 134.4 12.2 114 38-160 60-176 (285)
23 3dli_A Methyltransferase; PSI- 99.8 1.2E-18 4E-23 132.2 10.7 101 49-161 43-144 (240)
24 3bkw_A MLL3908 protein, S-aden 99.8 3.9E-18 1.3E-22 129.2 13.5 111 39-158 34-145 (243)
25 2i62_A Nicotinamide N-methyltr 99.8 4.4E-19 1.5E-23 136.1 8.1 146 10-159 16-200 (265)
26 3ggd_A SAM-dependent methyltra 99.8 2.9E-18 9.8E-23 130.4 12.3 105 49-161 58-167 (245)
27 3g5t_A Trans-aconitate 3-methy 99.8 1.6E-18 5.3E-23 135.7 11.0 137 9-159 3-151 (299)
28 3e23_A Uncharacterized protein 99.8 2.8E-18 9.6E-23 127.6 11.5 100 49-160 45-144 (211)
29 1xxl_A YCGJ protein; structura 99.8 3.8E-18 1.3E-22 129.4 12.3 115 37-160 11-127 (239)
30 3g2m_A PCZA361.24; SAM-depende 99.8 3E-18 1E-22 134.1 12.1 119 36-163 72-196 (299)
31 2ex4_A Adrenal gland protein A 99.8 1.2E-18 4E-23 132.3 9.4 106 48-159 80-187 (241)
32 3dh0_A SAM dependent methyltra 99.8 3.6E-18 1.2E-22 127.6 11.6 117 36-160 26-146 (219)
33 3kkz_A Uncharacterized protein 99.8 1.7E-18 6E-23 133.3 10.0 103 47-158 46-151 (267)
34 3ccf_A Cyclopropane-fatty-acyl 99.8 5.6E-18 1.9E-22 131.3 12.7 110 38-160 48-157 (279)
35 3jwh_A HEN1; methyltransferase 99.8 9.5E-18 3.2E-22 125.3 13.4 106 46-157 28-141 (217)
36 2o57_A Putative sarcosine dime 99.8 4.7E-18 1.6E-22 132.7 11.7 105 46-159 81-189 (297)
37 3pfg_A N-methyltransferase; N, 99.8 2.3E-18 7.7E-23 132.3 8.9 115 35-160 39-154 (263)
38 3jwg_A HEN1, methyltransferase 99.8 1.1E-17 3.6E-22 125.2 12.1 105 47-157 29-141 (219)
39 3ege_A Putative methyltransfer 99.7 5.7E-18 1.9E-22 130.1 10.2 113 36-162 22-135 (261)
40 3ou2_A SAM-dependent methyltra 99.7 2.8E-17 9.6E-22 122.4 13.7 116 36-161 34-150 (218)
41 2gs9_A Hypothetical protein TT 99.7 1.4E-17 4.7E-22 123.8 11.9 110 37-161 27-136 (211)
42 3m70_A Tellurite resistance pr 99.7 2.2E-17 7.6E-22 128.3 13.6 104 47-158 120-224 (286)
43 3cgg_A SAM-dependent methyltra 99.7 2.4E-17 8.2E-22 120.5 12.8 114 37-161 37-151 (195)
44 3bus_A REBM, methyltransferase 99.7 1.2E-17 4E-22 128.9 11.6 106 46-159 60-168 (273)
45 3mti_A RRNA methylase; SAM-dep 99.7 2E-17 6.7E-22 120.5 12.2 121 38-160 14-138 (185)
46 1ve3_A Hypothetical protein PH 99.7 2.2E-17 7.6E-22 123.8 12.7 117 36-160 28-145 (227)
47 1nkv_A Hypothetical protein YJ 99.7 7.6E-18 2.6E-22 128.7 10.3 113 37-158 26-141 (256)
48 2yqz_A Hypothetical protein TT 99.7 2.4E-17 8.1E-22 126.3 13.1 100 48-156 40-140 (263)
49 3mgg_A Methyltransferase; NYSG 99.7 1.1E-17 3.9E-22 129.2 10.9 116 35-158 24-143 (276)
50 3p9n_A Possible methyltransfer 99.7 6.4E-17 2.2E-21 118.3 14.0 109 46-160 43-156 (189)
51 3orh_A Guanidinoacetate N-meth 99.7 8.7E-18 3E-22 127.3 9.6 120 36-157 49-170 (236)
52 2p35_A Trans-aconitate 2-methy 99.7 3.1E-17 1.1E-21 125.4 12.8 111 37-159 23-134 (259)
53 3thr_A Glycine N-methyltransfe 99.7 6.5E-18 2.2E-22 131.7 8.8 111 47-159 57-177 (293)
54 3iv6_A Putative Zn-dependent a 99.7 3.2E-17 1.1E-21 125.4 12.4 111 37-158 35-149 (261)
55 3f4k_A Putative methyltransfer 99.7 2.3E-17 7.8E-22 126.1 11.5 101 49-158 48-151 (257)
56 3hem_A Cyclopropane-fatty-acyl 99.7 6.5E-17 2.2E-21 126.7 14.2 117 39-161 64-187 (302)
57 2p8j_A S-adenosylmethionine-de 99.7 3.1E-17 1.1E-21 121.6 11.7 106 49-161 25-132 (209)
58 3i9f_A Putative type 11 methyl 99.7 8.8E-18 3E-22 120.7 8.5 100 47-161 17-116 (170)
59 1ri5_A MRNA capping enzyme; me 99.7 5.6E-17 1.9E-21 126.4 12.6 113 43-160 61-177 (298)
60 2avn_A Ubiquinone/menaquinone 99.7 3E-17 1E-21 126.0 10.8 113 35-160 43-155 (260)
61 3vc1_A Geranyl diphosphate 2-C 99.7 4.5E-17 1.5E-21 128.2 11.8 102 47-158 117-222 (312)
62 1kpg_A CFA synthase;, cyclopro 99.7 1.2E-16 3.9E-21 124.3 14.0 105 46-160 63-171 (287)
63 2g72_A Phenylethanolamine N-me 99.7 1.7E-17 5.7E-22 129.3 9.0 107 48-157 72-215 (289)
64 1dus_A MJ0882; hypothetical pr 99.7 1.3E-16 4.4E-21 116.5 13.0 115 38-161 43-161 (194)
65 3g07_A 7SK snRNA methylphospha 99.7 3.9E-17 1.3E-21 127.4 10.5 109 48-157 47-220 (292)
66 1zx0_A Guanidinoacetate N-meth 99.7 3.7E-17 1.3E-21 123.7 10.0 111 45-158 58-171 (236)
67 1y8c_A S-adenosylmethionine-de 99.7 1.1E-16 3.7E-21 121.3 12.5 105 48-159 38-144 (246)
68 2fk8_A Methoxy mycolic acid sy 99.7 2E-16 7E-21 124.7 14.2 106 46-161 89-198 (318)
69 2vdw_A Vaccinia virus capping 99.7 4.6E-17 1.6E-21 127.5 10.4 109 48-160 49-172 (302)
70 3gu3_A Methyltransferase; alph 99.7 8.1E-17 2.8E-21 125.1 11.6 103 48-159 23-128 (284)
71 1wzn_A SAM-dependent methyltra 99.7 2.5E-16 8.7E-21 120.0 13.8 114 37-158 31-146 (252)
72 3e05_A Precorrin-6Y C5,15-meth 99.7 5.4E-16 1.9E-20 114.7 15.1 110 39-159 32-144 (204)
73 3evz_A Methyltransferase; NYSG 99.7 7.2E-17 2.5E-21 121.5 10.2 120 41-161 50-183 (230)
74 3lbf_A Protein-L-isoaspartate 99.7 2.3E-16 7.8E-21 117.1 12.1 137 8-159 35-176 (210)
75 1vbf_A 231AA long hypothetical 99.7 6.4E-16 2.2E-20 116.3 14.6 140 7-161 25-169 (231)
76 3bxo_A N,N-dimethyltransferase 99.7 2.4E-16 8.3E-21 119.0 12.3 135 13-160 9-144 (239)
77 3e8s_A Putative SAM dependent 99.7 9.1E-17 3.1E-21 120.2 9.7 110 39-161 44-156 (227)
78 4fsd_A Arsenic methyltransfera 99.7 1.1E-16 3.7E-21 129.4 10.6 104 48-158 84-204 (383)
79 3ocj_A Putative exported prote 99.7 1.7E-16 5.9E-21 124.5 10.7 115 39-160 111-230 (305)
80 3d2l_A SAM-dependent methyltra 99.7 6E-16 2.1E-20 117.1 13.3 115 36-159 23-139 (243)
81 2esr_A Methyltransferase; stru 99.7 3.3E-16 1.1E-20 113.2 10.8 107 47-161 31-142 (177)
82 3grz_A L11 mtase, ribosomal pr 99.7 2.1E-16 7.2E-21 116.9 10.0 111 36-160 50-162 (205)
83 3m33_A Uncharacterized protein 99.7 1.3E-16 4.3E-21 120.0 8.7 99 38-154 40-139 (226)
84 1yzh_A TRNA (guanine-N(7)-)-me 99.7 7.7E-16 2.6E-20 114.7 12.3 110 48-157 42-156 (214)
85 3ckk_A TRNA (guanine-N(7)-)-me 99.7 4.9E-16 1.7E-20 117.5 10.8 109 50-158 49-169 (235)
86 2qe6_A Uncharacterized protein 99.7 1.8E-15 6.3E-20 116.9 14.1 107 49-160 79-199 (274)
87 3eey_A Putative rRNA methylase 99.7 4.7E-16 1.6E-20 114.3 10.0 118 42-160 18-142 (197)
88 3dxy_A TRNA (guanine-N(7)-)-me 99.7 2.2E-16 7.4E-21 118.2 8.3 112 46-158 34-151 (218)
89 2fpo_A Methylase YHHF; structu 99.7 5.7E-16 2E-20 114.5 10.5 103 49-159 56-162 (202)
90 2ift_A Putative methylase HI07 99.7 1.7E-16 5.8E-21 117.3 7.7 105 49-161 55-167 (201)
91 3cc8_A Putative methyltransfer 99.7 6.2E-16 2.1E-20 115.9 10.8 106 42-160 27-133 (230)
92 3bgv_A MRNA CAP guanine-N7 met 99.7 1.1E-15 3.8E-20 120.3 12.7 110 49-161 36-159 (313)
93 2aot_A HMT, histamine N-methyl 99.7 7.3E-17 2.5E-21 125.8 5.8 105 49-160 54-175 (292)
94 1nt2_A Fibrillarin-like PRE-rR 99.7 1.1E-15 3.6E-20 113.8 11.8 101 47-157 57-161 (210)
95 4df3_A Fibrillarin-like rRNA/T 99.7 2.9E-15 1E-19 112.4 13.8 120 29-157 55-182 (233)
96 1vlm_A SAM-dependent methyltra 99.6 1.5E-15 5E-20 113.6 12.0 103 38-160 40-142 (219)
97 3dmg_A Probable ribosomal RNA 99.6 1.2E-15 4E-20 123.0 11.7 108 48-159 234-342 (381)
98 2yxe_A Protein-L-isoaspartate 99.6 3.4E-15 1.2E-19 111.2 13.3 141 7-161 34-181 (215)
99 4e2x_A TCAB9; kijanose, tetron 99.6 1.8E-16 6E-21 129.5 6.7 104 46-158 106-209 (416)
100 2fhp_A Methylase, putative; al 99.6 4.9E-16 1.7E-20 113.0 8.4 140 13-161 9-158 (187)
101 3bkx_A SAM-dependent methyltra 99.6 1.1E-15 3.7E-20 118.0 10.6 117 37-161 33-163 (275)
102 3lpm_A Putative methyltransfer 99.6 1.7E-15 5.8E-20 116.2 11.5 111 48-158 50-177 (259)
103 1ws6_A Methyltransferase; stru 99.6 1.5E-16 5.1E-21 114.1 5.1 104 49-162 43-152 (171)
104 2b3t_A Protein methyltransfera 99.6 1.4E-15 4.8E-20 117.6 10.8 143 13-157 75-238 (276)
105 3dp7_A SAM-dependent methyltra 99.6 3.9E-15 1.3E-19 119.5 13.7 115 38-159 170-289 (363)
106 3njr_A Precorrin-6Y methylase; 99.6 5.2E-15 1.8E-19 109.6 13.1 108 39-160 47-157 (204)
107 3hm2_A Precorrin-6Y C5,15-meth 99.6 3.2E-15 1.1E-19 107.9 11.7 111 39-161 17-131 (178)
108 3htx_A HEN1; HEN1, small RNA m 99.6 2.3E-15 7.8E-20 129.2 12.5 105 47-158 721-835 (950)
109 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.1E-15 7E-20 112.4 10.3 111 46-157 38-153 (213)
110 1af7_A Chemotaxis receptor met 99.6 1.7E-15 5.9E-20 116.7 10.0 102 49-156 107-251 (274)
111 2fyt_A Protein arginine N-meth 99.6 2.1E-15 7.1E-20 120.0 10.7 102 47-154 64-168 (340)
112 1l3i_A Precorrin-6Y methyltran 99.6 3.4E-15 1.2E-19 108.7 11.0 107 41-160 27-137 (192)
113 3uwp_A Histone-lysine N-methyl 99.6 1.6E-15 5.5E-20 121.7 9.6 114 36-158 162-289 (438)
114 4dcm_A Ribosomal RNA large sub 99.6 3.1E-15 1.1E-19 120.4 10.6 118 40-161 215-338 (375)
115 3fzg_A 16S rRNA methylase; met 99.6 1.3E-15 4.3E-20 110.0 7.4 106 42-157 45-152 (200)
116 1jg1_A PIMT;, protein-L-isoasp 99.6 7.3E-15 2.5E-19 111.0 11.9 140 7-161 48-193 (235)
117 3fpf_A Mtnas, putative unchara 99.6 2.5E-14 8.5E-19 110.6 15.0 100 46-158 121-223 (298)
118 2frn_A Hypothetical protein PH 99.6 2E-15 6.7E-20 117.0 8.6 111 36-160 115-228 (278)
119 3q7e_A Protein arginine N-meth 99.6 1.7E-15 5.9E-20 120.9 8.5 101 49-155 68-171 (349)
120 2pjd_A Ribosomal RNA small sub 99.6 2.3E-15 7.7E-20 120.0 9.1 111 45-160 194-306 (343)
121 2nxc_A L11 mtase, ribosomal pr 99.6 4.4E-15 1.5E-19 113.5 9.9 109 37-159 111-220 (254)
122 3r0q_C Probable protein argini 99.6 4.5E-15 1.5E-19 119.6 10.4 104 47-157 63-169 (376)
123 1fbn_A MJ fibrillarin homologu 99.6 5.3E-15 1.8E-19 111.4 10.1 101 47-157 74-178 (230)
124 3gdh_A Trimethylguanosine synt 99.6 3.7E-17 1.3E-21 124.0 -2.0 99 48-156 79-180 (241)
125 2yxd_A Probable cobalt-precorr 99.6 1.9E-14 6.4E-19 104.0 12.3 105 40-160 28-134 (183)
126 3q87_B N6 adenine specific DNA 99.6 4E-15 1.4E-19 107.0 8.5 99 49-159 25-125 (170)
127 1p91_A Ribosomal RNA large sub 99.6 2E-14 6.8E-19 110.6 12.8 106 38-161 76-182 (269)
128 3mcz_A O-methyltransferase; ad 99.6 7.8E-15 2.7E-19 117.2 10.7 106 48-159 180-289 (352)
129 3ntv_A MW1564 protein; rossman 99.6 4.3E-15 1.5E-19 112.1 8.7 100 48-157 72-176 (232)
130 3gwz_A MMCR; methyltransferase 99.6 2.6E-14 9E-19 114.9 13.8 107 46-161 201-311 (369)
131 1xdz_A Methyltransferase GIDB; 99.6 4.3E-15 1.5E-19 112.6 8.4 98 48-157 71-174 (240)
132 3adn_A Spermidine synthase; am 99.6 8.6E-15 3E-19 114.1 10.0 110 45-157 81-198 (294)
133 4dzr_A Protein-(glutamine-N5) 99.6 9.1E-16 3.1E-20 113.8 4.2 111 46-158 29-165 (215)
134 1o9g_A RRNA methyltransferase; 99.6 8.8E-15 3E-19 111.5 9.8 110 48-157 52-214 (250)
135 3i53_A O-methyltransferase; CO 99.6 1.2E-14 4.1E-19 115.3 10.6 104 49-161 171-278 (332)
136 2r3s_A Uncharacterized protein 99.6 1.6E-14 5.5E-19 114.5 11.1 108 46-161 164-275 (335)
137 2y1w_A Histone-arginine methyl 99.6 9.9E-15 3.4E-19 116.5 9.9 103 46-156 49-154 (348)
138 3bzb_A Uncharacterized protein 99.6 3.7E-14 1.3E-18 109.9 12.8 104 47-157 79-205 (281)
139 3u81_A Catechol O-methyltransf 99.6 8.8E-15 3E-19 109.5 9.0 105 48-160 59-173 (221)
140 3dr5_A Putative O-methyltransf 99.6 1E-14 3.6E-19 109.2 9.1 98 50-157 59-163 (221)
141 1g6q_1 HnRNP arginine N-methyl 99.6 8.8E-15 3E-19 115.9 9.1 102 48-155 39-143 (328)
142 3tfw_A Putative O-methyltransf 99.6 1.9E-14 6.5E-19 109.7 10.5 101 48-158 64-171 (248)
143 2ipx_A RRNA 2'-O-methyltransfe 99.6 2.9E-14 9.8E-19 107.5 11.3 103 47-158 77-183 (233)
144 1x19_A CRTF-related protein; m 99.6 4.6E-14 1.6E-18 113.0 13.1 115 38-161 181-299 (359)
145 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.9E-14 6.7E-19 109.4 10.2 109 49-157 51-173 (246)
146 2ozv_A Hypothetical protein AT 99.6 2.5E-14 8.6E-19 109.7 10.9 110 49-158 38-171 (260)
147 3g89_A Ribosomal RNA small sub 99.6 1.8E-14 6.3E-19 109.8 10.0 99 48-157 81-184 (249)
148 1dl5_A Protein-L-isoaspartate 99.6 1.6E-14 5.5E-19 113.9 9.9 108 37-158 65-176 (317)
149 1qzz_A RDMB, aclacinomycin-10- 99.6 3.5E-14 1.2E-18 114.2 12.1 113 37-158 172-288 (374)
150 2pbf_A Protein-L-isoaspartate 99.6 2.8E-14 9.7E-19 107.0 10.8 101 47-160 80-196 (227)
151 1g8a_A Fibrillarin-like PRE-rR 99.6 7.9E-14 2.7E-18 104.6 13.1 102 47-157 73-178 (227)
152 1i1n_A Protein-L-isoaspartate 99.5 2.5E-14 8.4E-19 107.3 9.5 100 46-159 76-184 (226)
153 1ej0_A FTSJ; methyltransferase 99.5 1.4E-14 4.9E-19 104.0 7.9 113 37-161 11-140 (180)
154 4azs_A Methyltransferase WBDD; 99.5 1.4E-14 4.9E-19 122.6 8.9 114 45-167 65-183 (569)
155 3tma_A Methyltransferase; thum 99.5 3.9E-14 1.4E-18 113.3 11.1 113 46-159 202-319 (354)
156 1jsx_A Glucose-inhibited divis 99.5 3.6E-14 1.2E-18 104.9 10.0 97 49-158 67-166 (207)
157 3p2e_A 16S rRNA methylase; met 99.5 1.9E-14 6.6E-19 108.0 8.6 117 38-157 16-139 (225)
158 3mq2_A 16S rRNA methyltransfer 99.5 1.1E-14 3.9E-19 108.6 7.0 111 38-157 18-140 (218)
159 2igt_A SAM dependent methyltra 99.5 4E-14 1.4E-18 112.2 10.5 111 49-160 155-275 (332)
160 3bwc_A Spermidine synthase; SA 99.5 3.6E-14 1.2E-18 111.2 10.1 110 46-158 94-211 (304)
161 3lec_A NADB-rossmann superfami 99.5 7.4E-14 2.5E-18 104.4 11.2 121 37-168 12-136 (230)
162 3b3j_A Histone-arginine methyl 99.5 2.8E-14 9.6E-19 118.2 9.8 101 47-155 158-261 (480)
163 3id6_C Fibrillarin-like rRNA/T 99.5 1.1E-13 3.9E-18 103.9 12.2 103 46-157 75-181 (232)
164 1u2z_A Histone-lysine N-methyl 99.5 5.7E-14 1.9E-18 114.4 11.1 113 37-157 232-359 (433)
165 1uir_A Polyamine aminopropyltr 99.5 2E-14 6.8E-19 113.1 8.2 112 46-157 76-195 (314)
166 1yb2_A Hypothetical protein TA 99.5 2.2E-14 7.4E-19 110.9 8.3 101 46-160 109-214 (275)
167 1inl_A Spermidine synthase; be 99.5 2.3E-14 7.8E-19 111.9 8.3 111 47-159 90-207 (296)
168 3tr6_A O-methyltransferase; ce 99.5 2.2E-14 7.4E-19 107.5 7.8 100 49-158 66-175 (225)
169 2ip2_A Probable phenazine-spec 99.5 6E-14 2E-18 111.3 10.8 102 49-159 169-274 (334)
170 4dmg_A Putative uncharacterize 99.5 5.5E-14 1.9E-18 113.6 10.6 123 37-161 205-330 (393)
171 2pt6_A Spermidine synthase; tr 99.5 4.6E-14 1.6E-18 111.3 9.8 110 47-159 116-232 (321)
172 1nv8_A HEMK protein; class I a 99.5 2.8E-14 9.7E-19 110.7 8.4 141 14-157 89-249 (284)
173 1tw3_A COMT, carminomycin 4-O- 99.5 8E-14 2.7E-18 111.6 11.3 112 39-159 175-290 (360)
174 1ne2_A Hypothetical protein TA 99.5 2.3E-13 7.8E-18 100.1 12.9 89 47-147 51-139 (200)
175 2i7c_A Spermidine synthase; tr 99.5 5.2E-14 1.8E-18 109.2 9.7 109 45-158 76-193 (283)
176 2o07_A Spermidine synthase; st 99.5 3.1E-14 1.1E-18 111.5 8.4 110 46-158 94-210 (304)
177 3duw_A OMT, O-methyltransferas 99.5 4.7E-14 1.6E-18 105.5 8.9 101 48-158 59-168 (223)
178 3hp7_A Hemolysin, putative; st 99.5 2.8E-14 9.6E-19 110.4 7.8 108 36-156 73-184 (291)
179 3kr9_A SAM-dependent methyltra 99.5 1.3E-13 4.5E-18 102.9 11.2 120 38-168 7-130 (225)
180 1iy9_A Spermidine synthase; ro 99.5 5.7E-14 1.9E-18 108.6 9.5 111 46-159 74-191 (275)
181 2pwy_A TRNA (adenine-N(1)-)-me 99.5 5.1E-14 1.7E-18 107.5 9.2 109 39-160 88-201 (258)
182 3gnl_A Uncharacterized protein 99.5 7.9E-14 2.7E-18 105.1 9.6 121 37-168 12-136 (244)
183 4hc4_A Protein arginine N-meth 99.5 3.9E-14 1.3E-18 113.5 8.1 101 48-155 84-187 (376)
184 3dou_A Ribosomal RNA large sub 99.5 7E-14 2.4E-18 102.4 8.6 115 36-162 13-144 (191)
185 3lst_A CALO1 methyltransferase 99.5 1.8E-13 6.2E-18 109.2 11.7 110 38-159 175-288 (348)
186 2plw_A Ribosomal RNA methyltra 99.5 2.1E-13 7.2E-18 100.3 11.2 115 36-161 10-158 (201)
187 2b2c_A Spermidine synthase; be 99.5 6.2E-14 2.1E-18 110.2 8.6 109 46-157 107-222 (314)
188 3sso_A Methyltransferase; macr 99.5 3.8E-14 1.3E-18 113.5 7.3 106 36-158 206-325 (419)
189 3mb5_A SAM-dependent methyltra 99.5 1.4E-13 4.8E-18 105.0 10.1 107 38-158 84-195 (255)
190 3reo_A (ISO)eugenol O-methyltr 99.5 1.6E-13 5.6E-18 110.2 10.9 98 49-160 205-303 (368)
191 1xj5_A Spermidine synthase 1; 99.5 1.1E-13 3.8E-18 109.6 9.7 109 46-157 119-235 (334)
192 3a27_A TYW2, uncharacterized p 99.5 6.9E-14 2.3E-18 108.0 8.3 99 49-160 121-222 (272)
193 2gpy_A O-methyltransferase; st 99.5 5.1E-14 1.8E-18 106.1 7.5 100 48-157 55-160 (233)
194 1mjf_A Spermidine synthase; sp 99.5 1.6E-13 5.6E-18 106.3 10.4 108 47-158 75-194 (281)
195 3c3p_A Methyltransferase; NP_9 99.5 3.8E-14 1.3E-18 105.1 6.4 98 49-157 58-160 (210)
196 3p9c_A Caffeic acid O-methyltr 99.5 2.1E-13 7.2E-18 109.4 11.1 99 47-159 201-300 (364)
197 1sui_A Caffeoyl-COA O-methyltr 99.5 5.8E-14 2E-18 106.9 7.4 100 48-157 80-190 (247)
198 2b25_A Hypothetical protein; s 99.5 1.8E-13 6.2E-18 108.7 10.5 110 38-159 96-221 (336)
199 1ixk_A Methyltransferase; open 99.5 3.4E-13 1.2E-17 106.2 11.9 115 45-160 116-249 (315)
200 1i9g_A Hypothetical protein RV 99.5 9.4E-14 3.2E-18 107.4 8.5 109 38-159 90-205 (280)
201 3ajd_A Putative methyltransfer 99.5 1.9E-13 6.5E-18 105.6 10.0 116 45-160 81-214 (274)
202 2as0_A Hypothetical protein PH 99.5 1.4E-13 4.9E-18 111.6 9.8 124 37-161 208-339 (396)
203 1r18_A Protein-L-isoaspartate( 99.5 7.5E-14 2.6E-18 104.8 7.5 99 47-159 84-196 (227)
204 2b78_A Hypothetical protein SM 99.5 9.3E-14 3.2E-18 112.2 8.6 123 38-161 204-335 (385)
205 2zfu_A Nucleomethylin, cerebra 99.5 8.5E-14 2.9E-18 103.5 7.7 86 49-160 69-154 (215)
206 3v97_A Ribosomal RNA large sub 99.5 1.6E-13 5.4E-18 118.4 10.4 122 36-159 530-659 (703)
207 3r3h_A O-methyltransferase, SA 99.5 1.4E-14 4.8E-19 110.0 3.1 101 48-158 61-171 (242)
208 1wy7_A Hypothetical protein PH 99.5 1.1E-12 3.6E-17 97.0 12.9 96 47-153 49-145 (207)
209 1fp1_D Isoliquiritigenin 2'-O- 99.5 1.8E-13 6.1E-18 110.2 9.2 97 48-158 210-307 (372)
210 3gjy_A Spermidine synthase; AP 99.5 3.7E-13 1.3E-17 105.3 10.2 108 50-160 92-203 (317)
211 4a6d_A Hydroxyindole O-methylt 99.5 1.5E-12 5.1E-17 104.1 13.9 104 47-159 179-285 (353)
212 3k6r_A Putative transferase PH 99.5 2.1E-13 7.1E-18 105.1 8.5 107 39-159 118-227 (278)
213 3giw_A Protein of unknown func 99.4 4.1E-13 1.4E-17 102.7 9.6 108 49-161 80-204 (277)
214 2cmg_A Spermidine synthase; tr 99.4 1.8E-13 6.3E-18 104.9 7.8 97 45-158 70-172 (262)
215 2bm8_A Cephalosporin hydroxyla 99.4 8.1E-14 2.8E-18 105.4 5.7 96 49-157 83-187 (236)
216 3c3y_A Pfomt, O-methyltransfer 99.4 2.2E-13 7.5E-18 103.1 7.9 100 48-157 71-181 (237)
217 2hnk_A SAM-dependent O-methylt 99.4 3E-13 1E-17 102.3 8.6 100 48-157 61-181 (239)
218 3c0k_A UPF0064 protein YCCW; P 99.4 4.8E-13 1.6E-17 108.5 9.9 123 37-161 212-343 (396)
219 3opn_A Putative hemolysin; str 99.4 1.5E-13 5.1E-18 103.6 6.2 107 36-157 25-137 (232)
220 2yvl_A TRMI protein, hypotheti 99.4 8.7E-13 3E-17 100.0 10.5 100 46-159 90-192 (248)
221 1o54_A SAM-dependent O-methylt 99.4 5.4E-13 1.8E-17 103.1 9.0 100 46-159 111-215 (277)
222 2qm3_A Predicted methyltransfe 99.4 1.1E-12 3.6E-17 105.7 10.8 103 48-159 173-280 (373)
223 1wxx_A TT1595, hypothetical pr 99.4 2.5E-13 8.6E-18 109.7 7.1 112 49-161 211-329 (382)
224 1zq9_A Probable dimethyladenos 99.4 1.1E-12 3.9E-17 101.8 10.5 87 36-126 17-106 (285)
225 2p41_A Type II methyltransfera 99.4 2E-13 6.7E-18 106.9 6.2 106 46-160 81-194 (305)
226 2wa2_A Non-structural protein 99.4 1.9E-13 6.3E-18 105.6 6.0 113 37-159 72-195 (276)
227 2oxt_A Nucleoside-2'-O-methylt 99.4 1.6E-13 5.3E-18 105.4 5.5 114 36-159 63-187 (265)
228 1fp2_A Isoflavone O-methyltran 99.4 5.6E-13 1.9E-17 106.5 8.7 96 49-158 190-289 (352)
229 3tm4_A TRNA (guanine N2-)-meth 99.4 2.6E-12 8.9E-17 103.4 12.3 110 45-157 215-329 (373)
230 2avd_A Catechol-O-methyltransf 99.4 4.9E-13 1.7E-17 100.3 7.1 100 48-157 70-179 (229)
231 2yx1_A Hypothetical protein MJ 99.4 1.1E-12 3.6E-17 104.2 8.8 102 42-161 191-295 (336)
232 2h00_A Methyltransferase 10 do 99.4 2.3E-13 8E-18 103.8 4.8 79 48-126 66-153 (254)
233 3m4x_A NOL1/NOP2/SUN family pr 99.4 2.2E-12 7.5E-17 105.8 10.7 116 45-160 103-237 (456)
234 3cbg_A O-methyltransferase; cy 99.4 5.4E-13 1.9E-17 100.5 6.5 101 48-158 73-183 (232)
235 2nyu_A Putative ribosomal RNA 99.4 3.2E-12 1.1E-16 93.5 10.1 102 48-161 23-149 (196)
236 3m6w_A RRNA methylase; rRNA me 99.4 2.7E-12 9.3E-17 105.4 10.4 115 45-160 99-232 (464)
237 2frx_A Hypothetical protein YE 99.4 3.3E-12 1.1E-16 105.7 10.0 114 47-160 117-249 (479)
238 2yxl_A PH0851 protein, 450AA l 99.4 5.6E-12 1.9E-16 103.8 11.3 117 45-161 257-393 (450)
239 2f8l_A Hypothetical protein LM 99.4 1.8E-12 6.1E-17 103.3 8.1 108 49-158 132-257 (344)
240 3gru_A Dimethyladenosine trans 99.3 6.3E-12 2.1E-16 97.7 10.7 88 36-125 39-126 (295)
241 1sqg_A SUN protein, FMU protei 99.3 4.9E-12 1.7E-16 103.6 10.3 116 45-160 244-377 (429)
242 3lcv_B Sisomicin-gentamicin re 99.3 3.5E-12 1.2E-16 96.2 8.6 103 44-157 130-236 (281)
243 1zg3_A Isoflavanone 4'-O-methy 99.3 2.1E-12 7.1E-17 103.4 7.7 96 49-158 195-294 (358)
244 2h1r_A Dimethyladenosine trans 99.3 1.4E-11 4.9E-16 96.2 11.9 86 36-125 31-118 (299)
245 2qfm_A Spermine synthase; sper 99.3 6.6E-12 2.3E-16 99.4 9.8 113 47-160 188-317 (364)
246 3frh_A 16S rRNA methylase; met 99.3 6.9E-12 2.4E-16 93.7 8.7 100 48-157 106-206 (253)
247 1uwv_A 23S rRNA (uracil-5-)-me 99.3 2E-11 6.9E-16 100.0 12.3 99 46-156 285-388 (433)
248 2ld4_A Anamorsin; methyltransf 99.3 2.6E-12 8.9E-17 92.5 5.0 85 49-157 14-101 (176)
249 3tqs_A Ribosomal RNA small sub 99.3 7.2E-11 2.5E-15 90.0 12.5 86 36-124 18-107 (255)
250 1qam_A ERMC' methyltransferase 99.3 1.1E-10 3.6E-15 88.7 13.0 84 38-124 21-105 (244)
251 1yub_A Ermam, rRNA methyltrans 99.2 9.1E-13 3.1E-17 100.1 0.7 114 35-157 17-145 (245)
252 3bt7_A TRNA (uracil-5-)-methyl 99.2 2.8E-11 9.6E-16 97.2 9.4 99 48-160 214-329 (369)
253 2ih2_A Modification methylase 99.2 1.2E-11 4.1E-16 100.9 7.3 117 34-159 25-166 (421)
254 2jjq_A Uncharacterized RNA met 99.2 8.4E-11 2.9E-15 96.0 11.5 94 49-157 292-387 (425)
255 3ldg_A Putative uncharacterize 99.2 1.8E-10 6E-15 92.8 12.6 108 46-158 193-344 (384)
256 3fut_A Dimethyladenosine trans 99.2 7.4E-11 2.5E-15 90.6 9.1 86 35-124 35-121 (271)
257 2okc_A Type I restriction enzy 99.2 7.9E-11 2.7E-15 96.9 9.2 122 35-158 158-308 (445)
258 3k0b_A Predicted N6-adenine-sp 99.2 1.2E-10 4E-15 94.2 9.9 108 46-158 200-351 (393)
259 3ldu_A Putative methylase; str 99.1 2.3E-10 8E-15 92.3 10.6 108 46-158 194-345 (385)
260 3axs_A Probable N(2),N(2)-dime 99.1 6.2E-11 2.1E-15 95.5 6.4 99 48-157 53-158 (392)
261 2b9e_A NOL1/NOP2/SUN domain fa 99.1 8.8E-10 3E-14 86.3 12.7 115 45-160 100-237 (309)
262 2dul_A N(2),N(2)-dimethylguano 99.1 7.8E-11 2.7E-15 94.7 6.8 98 48-156 48-163 (378)
263 2xyq_A Putative 2'-O-methyl tr 99.1 2E-10 6.8E-15 88.9 8.8 100 47-161 63-175 (290)
264 3o4f_A Spermidine synthase; am 99.1 4.2E-10 1.4E-14 86.9 10.5 111 44-157 80-198 (294)
265 3ftd_A Dimethyladenosine trans 99.1 1.1E-09 3.7E-14 83.3 10.8 84 37-124 21-106 (249)
266 3evf_A RNA-directed RNA polyme 99.1 5.7E-11 1.9E-15 90.1 2.9 121 35-159 62-186 (277)
267 2ar0_A M.ecoki, type I restric 99.0 4.4E-10 1.5E-14 94.4 7.5 124 35-158 156-313 (541)
268 3uzu_A Ribosomal RNA small sub 99.0 1.9E-09 6.6E-14 83.2 10.4 85 36-124 31-125 (279)
269 2r6z_A UPF0341 protein in RSP 99.0 2.4E-10 8.1E-15 87.4 4.3 100 49-149 85-210 (258)
270 1qyr_A KSGA, high level kasuga 99.0 7.9E-10 2.7E-14 84.1 6.8 84 37-124 11-101 (252)
271 1m6y_A S-adenosyl-methyltransf 98.9 1.6E-09 5.6E-14 84.4 7.5 87 36-122 15-107 (301)
272 3v97_A Ribosomal RNA large sub 98.9 5.4E-09 1.8E-13 90.4 10.6 110 46-158 189-348 (703)
273 3gcz_A Polyprotein; flavivirus 98.9 2.3E-10 7.8E-15 87.0 1.0 121 35-159 78-203 (282)
274 2oyr_A UPF0341 protein YHIQ; a 98.9 7.5E-10 2.6E-14 84.4 3.7 76 49-125 90-176 (258)
275 3ll7_A Putative methyltransfer 98.9 2.1E-09 7.2E-14 86.8 6.5 76 48-124 94-174 (410)
276 2k4m_A TR8_protein, UPF0146 pr 98.9 7.5E-09 2.5E-13 71.0 7.3 100 36-162 25-126 (153)
277 3khk_A Type I restriction-modi 98.9 5.8E-09 2E-13 87.6 8.1 127 31-158 228-396 (544)
278 3lkd_A Type I restriction-modi 98.8 2.7E-08 9.4E-13 83.4 11.9 112 47-158 221-359 (542)
279 2efj_A 3,7-dimethylxanthine me 98.8 5.5E-08 1.9E-12 77.9 12.6 115 49-163 54-231 (384)
280 3s1s_A Restriction endonucleas 98.8 6.5E-08 2.2E-12 83.5 12.8 111 48-158 322-466 (878)
281 3cvo_A Methyltransferase-like 98.8 3.6E-08 1.2E-12 72.1 9.7 106 37-157 21-154 (202)
282 3c6k_A Spermine synthase; sper 98.8 1.8E-08 6.2E-13 80.2 8.5 111 47-157 205-331 (381)
283 3ua3_A Protein arginine N-meth 98.8 9.9E-09 3.4E-13 87.2 6.5 101 49-155 411-532 (745)
284 4fzv_A Putative methyltransfer 98.8 7.5E-08 2.6E-12 76.6 11.2 118 44-161 145-288 (359)
285 4gqb_A Protein arginine N-meth 98.7 1.4E-08 4.7E-13 86.1 6.1 100 49-155 359-465 (637)
286 3eld_A Methyltransferase; flav 98.7 1E-08 3.5E-13 78.4 3.4 123 36-163 70-199 (300)
287 3b5i_A S-adenosyl-L-methionine 98.6 2.2E-07 7.4E-12 74.4 10.7 113 49-161 54-229 (374)
288 2qy6_A UPF0209 protein YFCK; s 98.6 3.2E-08 1.1E-12 75.4 5.5 114 49-168 62-222 (257)
289 1m6e_X S-adenosyl-L-methionnin 98.6 1.5E-07 5.2E-12 74.8 8.8 114 49-162 53-214 (359)
290 1wg8_A Predicted S-adenosylmet 98.6 4.4E-07 1.5E-11 69.3 9.5 82 36-120 11-96 (285)
291 2px2_A Genome polyprotein [con 98.5 3.9E-07 1.3E-11 68.3 8.2 115 36-160 62-186 (269)
292 2wk1_A NOVP; transferase, O-me 98.4 1.1E-06 3.8E-11 67.6 8.6 103 48-159 107-246 (282)
293 4auk_A Ribosomal RNA large sub 98.4 1.9E-06 6.4E-11 68.4 9.9 72 46-124 210-281 (375)
294 3p8z_A Mtase, non-structural p 98.4 2.4E-06 8.2E-11 63.2 8.8 120 35-162 66-191 (267)
295 3lkz_A Non-structural protein 98.4 9.3E-07 3.2E-11 67.5 6.8 117 36-160 83-207 (321)
296 3ufb_A Type I restriction-modi 98.3 6.9E-06 2.3E-10 68.8 12.7 130 29-158 198-363 (530)
297 3r24_A NSP16, 2'-O-methyl tran 98.1 3.8E-05 1.3E-09 58.7 10.0 98 49-162 111-222 (344)
298 2oo3_A Protein involved in cat 98.1 4.7E-06 1.6E-10 63.7 5.2 104 50-161 94-202 (283)
299 2zig_A TTHA0409, putative modi 98.0 1.6E-05 5.5E-10 61.7 6.8 54 36-91 225-278 (297)
300 3tka_A Ribosomal RNA small sub 97.8 5.4E-05 1.8E-09 59.2 6.8 86 35-122 45-137 (347)
301 3vyw_A MNMC2; tRNA wobble urid 97.7 0.00029 9.9E-09 54.6 9.9 113 50-168 99-235 (308)
302 2c7p_A Modification methylase 97.7 0.00033 1.1E-08 55.1 10.4 74 49-127 12-85 (327)
303 1i4w_A Mitochondrial replicati 97.7 0.00016 5.3E-09 57.4 8.2 71 35-106 40-117 (353)
304 3g7u_A Cytosine-specific methy 97.7 0.00044 1.5E-08 55.4 10.6 75 50-127 4-85 (376)
305 2vz8_A Fatty acid synthase; tr 97.6 2.1E-05 7.2E-10 76.5 2.0 101 49-157 1242-1348(2512)
306 1g55_A DNA cytosine methyltran 97.5 0.00023 7.7E-09 56.4 7.3 75 50-127 4-82 (343)
307 1g60_A Adenine-specific methyl 97.5 0.00027 9.2E-09 53.7 7.0 55 36-92 202-256 (260)
308 3ubt_Y Modification methylase 97.5 0.0014 4.6E-08 51.5 10.8 74 50-127 2-75 (331)
309 1rjd_A PPM1P, carboxy methyl t 97.3 0.0021 7E-08 50.7 10.5 117 36-159 85-234 (334)
310 2qrv_A DNA (cytosine-5)-methyl 97.0 0.0094 3.2E-07 46.0 10.7 76 49-127 17-97 (295)
311 3me5_A Cytosine-specific methy 96.9 0.0035 1.2E-07 51.8 8.2 78 50-127 90-183 (482)
312 2uyo_A Hypothetical protein ML 96.9 0.021 7.3E-07 44.4 12.3 117 38-160 93-221 (310)
313 3qv2_A 5-cytosine DNA methyltr 96.8 0.0033 1.1E-07 49.4 7.0 73 50-126 12-89 (327)
314 3tos_A CALS11; methyltransfera 96.7 0.017 6E-07 43.6 10.4 106 44-159 67-219 (257)
315 4h0n_A DNMT2; SAH binding, tra 96.6 0.0037 1.3E-07 49.2 5.9 75 50-127 5-83 (333)
316 2zig_A TTHA0409, putative modi 96.5 0.0032 1.1E-07 48.7 4.9 64 94-157 20-97 (297)
317 1boo_A Protein (N-4 cytosine-s 96.4 0.0091 3.1E-07 46.7 7.0 69 36-106 242-311 (323)
318 3pvc_A TRNA 5-methylaminomethy 96.3 0.0034 1.2E-07 54.2 4.6 102 49-154 60-208 (689)
319 1f8f_A Benzyl alcohol dehydrog 96.3 0.025 8.6E-07 44.9 9.3 95 47-158 190-290 (371)
320 3ps9_A TRNA 5-methylaminomethy 96.3 0.0044 1.5E-07 53.4 5.1 101 50-154 69-216 (676)
321 1eg2_A Modification methylase 96.1 0.013 4.4E-07 45.8 6.3 55 36-92 232-289 (319)
322 1pl8_A Human sorbitol dehydrog 96.0 0.045 1.5E-06 43.2 9.3 96 46-158 170-274 (356)
323 2py6_A Methyltransferase FKBM; 95.6 0.017 5.9E-07 46.7 5.4 45 48-92 227-274 (409)
324 3uko_A Alcohol dehydrogenase c 95.5 0.056 1.9E-06 43.0 8.3 96 46-158 192-296 (378)
325 1boo_A Protein (N-4 cytosine-s 95.5 0.019 6.3E-07 45.0 5.3 64 94-157 13-84 (323)
326 3m6i_A L-arabinitol 4-dehydrog 95.5 0.13 4.6E-06 40.5 10.2 97 46-158 178-284 (363)
327 1zkd_A DUF185; NESG, RPR58, st 95.4 0.12 4.1E-06 41.4 9.6 43 50-92 83-133 (387)
328 3two_A Mannitol dehydrogenase; 95.3 0.074 2.5E-06 41.8 8.2 92 46-160 175-268 (348)
329 4dvj_A Putative zinc-dependent 95.2 0.043 1.5E-06 43.5 6.5 91 49-156 173-269 (363)
330 4ej6_A Putative zinc-binding d 95.2 0.16 5.5E-06 40.3 9.8 96 46-158 181-285 (370)
331 3fpc_A NADP-dependent alcohol 95.1 0.22 7.5E-06 39.1 10.4 97 46-159 165-268 (352)
332 3s2e_A Zinc-containing alcohol 95.1 0.02 7E-07 44.9 4.2 94 46-158 165-264 (340)
333 2dph_A Formaldehyde dismutase; 95.0 0.11 3.6E-06 41.7 8.3 107 46-157 184-299 (398)
334 1uuf_A YAHK, zinc-type alcohol 94.9 0.12 4E-06 41.1 8.1 92 47-157 194-288 (369)
335 1p0f_A NADP-dependent alcohol 94.7 0.14 4.7E-06 40.6 8.3 95 47-158 191-294 (373)
336 1e3j_A NADP(H)-dependent ketos 94.5 0.2 6.8E-06 39.3 8.6 95 46-158 167-272 (352)
337 3swr_A DNA (cytosine-5)-methyl 94.3 0.22 7.6E-06 44.7 9.2 75 50-127 542-632 (1002)
338 3fwz_A Inner membrane protein 94.2 0.74 2.5E-05 30.8 10.0 92 50-157 9-105 (140)
339 2jhf_A Alcohol dehydrogenase E 94.2 0.29 9.8E-06 38.8 9.0 95 47-158 191-294 (374)
340 1cdo_A Alcohol dehydrogenase; 94.1 0.25 8.5E-06 39.1 8.5 95 47-158 192-295 (374)
341 2hwk_A Helicase NSP2; rossman 94.0 0.0086 2.9E-07 45.5 -0.2 67 95-163 189-260 (320)
342 1e3i_A Alcohol dehydrogenase, 93.9 0.28 9.5E-06 38.9 8.4 95 47-158 195-298 (376)
343 2fzw_A Alcohol dehydrogenase c 93.9 0.22 7.4E-06 39.4 7.8 95 47-158 190-293 (373)
344 4ft4_B DNA (cytosine-5)-methyl 93.8 0.22 7.6E-06 43.6 8.3 52 49-103 213-270 (784)
345 1vj0_A Alcohol dehydrogenase, 93.8 0.31 1.1E-05 38.8 8.5 95 47-158 195-299 (380)
346 3uog_A Alcohol dehydrogenase; 93.8 0.38 1.3E-05 38.0 9.0 94 47-158 189-288 (363)
347 1kol_A Formaldehyde dehydrogen 93.8 0.47 1.6E-05 37.9 9.6 106 47-157 185-300 (398)
348 2h6e_A ADH-4, D-arabinose 1-de 93.8 0.17 5.9E-06 39.6 6.9 94 47-158 170-270 (344)
349 4a2c_A Galactitol-1-phosphate 93.6 0.86 3E-05 35.4 10.6 96 46-158 159-261 (346)
350 3jv7_A ADH-A; dehydrogenase, n 93.4 0.28 9.6E-06 38.3 7.5 96 46-158 170-271 (345)
351 1rjw_A ADH-HT, alcohol dehydro 93.3 0.47 1.6E-05 37.0 8.7 92 46-158 163-262 (339)
352 4b7c_A Probable oxidoreductase 93.2 0.12 4E-06 40.3 5.0 94 46-157 148-248 (336)
353 3fbg_A Putative arginate lyase 93.1 0.14 4.9E-06 40.1 5.4 92 47-156 150-247 (346)
354 1g60_A Adenine-specific methyl 93.0 0.083 2.8E-06 39.8 3.8 63 95-157 4-74 (260)
355 1eg2_A Modification methylase 92.9 0.12 4.1E-06 40.3 4.6 62 96-157 39-106 (319)
356 1v3u_A Leukotriene B4 12- hydr 92.7 0.68 2.3E-05 35.9 8.8 91 46-157 144-244 (333)
357 3ip1_A Alcohol dehydrogenase, 92.6 1.2 4E-05 35.7 10.3 99 48-158 214-319 (404)
358 3ggo_A Prephenate dehydrogenas 92.6 1.4 4.9E-05 34.0 10.4 90 49-156 34-127 (314)
359 2b5w_A Glucose dehydrogenase; 92.6 0.29 1E-05 38.5 6.5 89 49-158 174-274 (357)
360 2d8a_A PH0655, probable L-thre 92.5 0.53 1.8E-05 36.8 8.0 95 47-158 167-268 (348)
361 1piw_A Hypothetical zinc-type 92.5 0.19 6.6E-06 39.6 5.4 95 47-158 179-277 (360)
362 2j3h_A NADP-dependent oxidored 92.4 0.14 4.8E-06 40.0 4.5 91 47-157 155-255 (345)
363 3gms_A Putative NADPH:quinone 92.3 0.42 1.5E-05 37.2 7.2 94 46-158 143-244 (340)
364 1jvb_A NAD(H)-dependent alcoho 92.3 0.36 1.2E-05 37.8 6.7 94 47-158 170-272 (347)
365 3pxx_A Carveol dehydrogenase; 92.3 1.3 4.5E-05 33.3 9.7 108 48-157 10-153 (287)
366 3nx4_A Putative oxidoreductase 92.2 0.52 1.8E-05 36.4 7.5 91 50-158 149-242 (324)
367 1pqw_A Polyketide synthase; ro 92.2 0.65 2.2E-05 32.9 7.5 90 47-157 38-137 (198)
368 3c85_A Putative glutathione-re 92.1 2.1 7.3E-05 29.8 10.5 93 49-157 40-139 (183)
369 4eez_A Alcohol dehydrogenase 1 92.1 0.43 1.5E-05 37.2 6.9 97 45-158 161-264 (348)
370 4eso_A Putative oxidoreductase 92.0 0.78 2.7E-05 34.1 8.1 107 48-157 8-138 (255)
371 3llv_A Exopolyphosphatase-rela 91.9 0.78 2.7E-05 30.5 7.3 65 50-120 8-77 (141)
372 3oig_A Enoyl-[acyl-carrier-pro 91.8 1.6 5.6E-05 32.4 9.6 108 49-157 8-147 (266)
373 3av4_A DNA (cytosine-5)-methyl 91.6 1.5 5.1E-05 40.7 10.6 76 49-127 852-943 (1330)
374 3goh_A Alcohol dehydrogenase, 91.6 0.26 8.8E-06 38.0 5.1 87 46-157 141-229 (315)
375 3grk_A Enoyl-(acyl-carrier-pro 91.6 1.9 6.7E-05 32.7 10.0 110 48-158 31-170 (293)
376 2cf5_A Atccad5, CAD, cinnamyl 91.5 0.36 1.2E-05 38.0 5.9 93 47-157 180-275 (357)
377 3gvc_A Oxidoreductase, probabl 91.5 2.4 8.3E-05 31.9 10.4 73 48-123 29-113 (277)
378 1yqd_A Sinapyl alcohol dehydro 91.4 0.64 2.2E-05 36.7 7.3 94 47-158 187-283 (366)
379 2hcy_A Alcohol dehydrogenase 1 91.2 0.33 1.1E-05 38.0 5.4 92 47-158 169-270 (347)
380 2eih_A Alcohol dehydrogenase; 90.9 1.7 5.7E-05 33.8 9.2 89 48-157 167-265 (343)
381 4dcm_A Ribosomal RNA large sub 90.7 3.5 0.00012 32.7 11.0 94 49-158 40-137 (375)
382 2dq4_A L-threonine 3-dehydroge 90.6 0.42 1.4E-05 37.3 5.5 94 47-158 164-263 (343)
383 2c0c_A Zinc binding alcohol de 90.4 2.1 7E-05 33.7 9.3 93 46-157 162-261 (362)
384 3qwb_A Probable quinone oxidor 90.3 1.1 3.8E-05 34.7 7.7 93 47-158 148-248 (334)
385 3jyn_A Quinone oxidoreductase; 89.9 1.7 5.9E-05 33.5 8.4 93 47-158 140-240 (325)
386 1lss_A TRK system potassium up 89.8 2.9 9.8E-05 27.3 9.8 91 49-155 5-100 (140)
387 3tqh_A Quinone oxidoreductase; 89.4 2.7 9.4E-05 32.3 9.3 92 46-157 151-245 (321)
388 4eye_A Probable oxidoreductase 89.4 1.6 5.4E-05 34.0 7.9 93 47-158 159-258 (342)
389 3l9w_A Glutathione-regulated p 89.4 3.7 0.00013 33.1 10.1 92 50-157 6-102 (413)
390 3l4b_C TRKA K+ channel protien 89.4 4.6 0.00016 29.0 10.0 91 50-155 2-97 (218)
391 3k31_A Enoyl-(acyl-carrier-pro 89.3 1.9 6.4E-05 32.8 8.1 109 49-158 31-169 (296)
392 2a4k_A 3-oxoacyl-[acyl carrier 89.3 5.4 0.00018 29.6 10.5 72 49-123 7-90 (263)
393 3krt_A Crotonyl COA reductase; 89.2 2.1 7.2E-05 34.8 8.7 93 47-157 228-344 (456)
394 2zb4_A Prostaglandin reductase 89.0 0.51 1.8E-05 37.0 4.8 90 49-157 162-260 (357)
395 4dqx_A Probable oxidoreductase 89.0 5.5 0.00019 29.9 10.5 73 48-123 27-111 (277)
396 3dmg_A Probable ribosomal RNA 89.0 3.4 0.00012 32.9 9.6 105 37-157 35-139 (381)
397 3iei_A Leucine carboxyl methyl 89.0 3 0.0001 32.6 9.1 116 37-159 78-231 (334)
398 2gdz_A NAD+-dependent 15-hydro 88.9 2.3 7.8E-05 31.6 8.2 73 49-122 8-95 (267)
399 1wma_A Carbonyl reductase [NAD 88.8 2.4 8.4E-05 31.3 8.4 73 49-122 5-91 (276)
400 1yb5_A Quinone oxidoreductase; 88.7 2.8 9.7E-05 32.7 8.9 90 47-157 170-269 (351)
401 1qor_A Quinone oxidoreductase; 88.7 2.5 8.5E-05 32.6 8.5 91 47-158 140-240 (327)
402 1zcj_A Peroxisomal bifunctiona 88.6 4.5 0.00015 33.1 10.3 94 49-157 38-150 (463)
403 3ius_A Uncharacterized conserv 88.3 6.4 0.00022 29.3 10.5 63 49-122 6-72 (286)
404 4dkj_A Cytosine-specific methy 88.3 3 0.0001 33.5 8.8 43 50-92 12-60 (403)
405 3ek2_A Enoyl-(acyl-carrier-pro 88.2 2.7 9.3E-05 31.1 8.3 109 48-157 14-153 (271)
406 2ew2_A 2-dehydropantoate 2-red 88.2 6 0.0002 29.9 10.4 96 50-156 5-107 (316)
407 2dpo_A L-gulonate 3-dehydrogen 88.2 2.1 7.1E-05 33.2 7.7 94 50-157 8-123 (319)
408 3edm_A Short chain dehydrogena 88.1 2.7 9.3E-05 31.2 8.2 109 48-157 8-143 (259)
409 4fgs_A Probable dehydrogenase 88.1 4 0.00014 30.8 9.1 108 47-157 28-159 (273)
410 4dup_A Quinone oxidoreductase; 88.1 3 0.0001 32.6 8.7 93 47-158 167-266 (353)
411 3ado_A Lambda-crystallin; L-gu 88.0 2.7 9.1E-05 32.7 8.1 99 49-161 7-127 (319)
412 4e12_A Diketoreductase; oxidor 87.9 3.7 0.00013 31.0 8.9 94 50-157 6-121 (283)
413 3hwr_A 2-dehydropantoate 2-red 87.3 5.6 0.00019 30.6 9.7 95 50-157 21-120 (318)
414 1wly_A CAAR, 2-haloacrylate re 87.2 5.7 0.0002 30.6 9.8 91 47-158 145-245 (333)
415 2cdc_A Glucose dehydrogenase g 87.0 2.2 7.5E-05 33.5 7.4 91 48-158 181-279 (366)
416 2j8z_A Quinone oxidoreductase; 86.9 4.1 0.00014 31.8 8.9 91 47-158 162-262 (354)
417 2f1k_A Prephenate dehydrogenas 86.8 7.4 0.00025 29.0 10.0 85 50-154 2-88 (279)
418 1iz0_A Quinone oxidoreductase; 86.6 1.5 5.1E-05 33.4 6.0 89 46-157 124-218 (302)
419 3u5t_A 3-oxoacyl-[acyl-carrier 86.5 2.5 8.5E-05 31.6 7.1 109 48-157 27-161 (267)
420 4g81_D Putative hexonate dehyd 86.3 1.9 6.6E-05 32.3 6.3 76 47-123 8-96 (255)
421 3gaf_A 7-alpha-hydroxysteroid 86.2 2.8 9.5E-05 31.0 7.3 75 48-123 12-99 (256)
422 3ew7_A LMO0794 protein; Q8Y8U8 86.2 6.2 0.00021 27.9 9.0 96 50-157 2-102 (221)
423 1id1_A Putative potassium chan 86.2 5.8 0.0002 26.6 10.2 95 50-157 5-105 (153)
424 3is3_A 17BETA-hydroxysteroid d 86.1 5.3 0.00018 29.7 8.8 109 49-158 19-153 (270)
425 3v2g_A 3-oxoacyl-[acyl-carrier 86.0 5.1 0.00017 30.0 8.7 109 48-157 31-165 (271)
426 4a0s_A Octenoyl-COA reductase/ 85.9 1 3.5E-05 36.5 5.0 93 47-157 220-336 (447)
427 1xa0_A Putative NADPH dependen 85.8 0.9 3.1E-05 35.1 4.5 89 50-157 152-246 (328)
428 1xq1_A Putative tropinone redu 85.5 4.5 0.00015 29.8 8.1 73 49-122 15-101 (266)
429 3g0o_A 3-hydroxyisobutyrate de 85.4 3.7 0.00013 31.3 7.8 89 50-157 9-102 (303)
430 3ijr_A Oxidoreductase, short c 85.4 7.8 0.00027 29.2 9.5 109 48-157 47-182 (291)
431 3mog_A Probable 3-hydroxybutyr 85.4 12 0.00042 30.7 11.2 94 50-158 7-121 (483)
432 2vhw_A Alanine dehydrogenase; 85.2 0.63 2.1E-05 37.1 3.4 99 48-157 168-268 (377)
433 3nyw_A Putative oxidoreductase 85.2 2.4 8.2E-05 31.3 6.4 74 49-123 8-97 (250)
434 2eez_A Alanine dehydrogenase; 85.0 0.93 3.2E-05 35.9 4.2 99 49-158 167-267 (369)
435 1ae1_A Tropinone reductase-I; 84.9 4.1 0.00014 30.4 7.7 74 49-123 22-109 (273)
436 1hdc_A 3-alpha, 20 beta-hydrox 84.8 3.4 0.00011 30.5 7.1 72 49-123 6-89 (254)
437 4g65_A TRK system potassium up 84.3 1.5 5.1E-05 35.9 5.2 67 49-120 4-75 (461)
438 2g1u_A Hypothetical protein TM 84.3 2.9 9.9E-05 28.3 6.1 94 49-157 20-118 (155)
439 3gg2_A Sugar dehydrogenase, UD 84.2 8.1 0.00028 31.4 9.6 102 50-157 4-122 (450)
440 3c24_A Putative oxidoreductase 84.2 5.9 0.0002 29.8 8.4 83 50-154 13-98 (286)
441 4fn4_A Short chain dehydrogena 84.1 2.9 0.0001 31.2 6.4 74 48-122 7-93 (254)
442 1bg6_A N-(1-D-carboxylethyl)-L 83.5 6.3 0.00022 30.5 8.5 92 50-156 6-108 (359)
443 3r3s_A Oxidoreductase; structu 83.3 5.4 0.00018 30.2 7.8 108 49-157 50-185 (294)
444 3ioy_A Short-chain dehydrogena 83.0 3.2 0.00011 32.0 6.5 74 49-123 9-97 (319)
445 3gaz_A Alcohol dehydrogenase s 82.8 1.5 5.1E-05 34.2 4.5 89 47-157 150-246 (343)
446 2g5c_A Prephenate dehydrogenas 82.6 13 0.00044 27.7 10.5 88 50-155 3-94 (281)
447 1pjc_A Protein (L-alanine dehy 82.6 0.75 2.6E-05 36.3 2.7 100 49-159 168-269 (361)
448 3iht_A S-adenosyl-L-methionine 82.6 3.6 0.00012 28.4 5.7 100 44-155 38-145 (174)
449 1g0o_A Trihydroxynaphthalene r 82.4 7 0.00024 29.3 8.1 109 48-157 29-163 (283)
450 3gqv_A Enoyl reductase; medium 82.4 5.1 0.00017 31.5 7.5 94 46-157 163-263 (371)
451 1tt7_A YHFP; alcohol dehydroge 82.3 1.7 6E-05 33.5 4.7 90 50-158 153-248 (330)
452 3ksu_A 3-oxoacyl-acyl carrier 82.3 4.8 0.00017 29.8 7.1 109 48-157 11-147 (262)
453 1fmc_A 7 alpha-hydroxysteroid 82.1 3.5 0.00012 30.2 6.2 73 49-122 12-97 (255)
454 3v8b_A Putative dehydrogenase, 82.0 5.9 0.0002 29.8 7.5 75 48-123 28-115 (283)
455 3imf_A Short chain dehydrogena 81.9 4.7 0.00016 29.8 6.9 73 49-122 7-92 (257)
456 3k96_A Glycerol-3-phosphate de 81.8 12 0.00042 29.3 9.5 93 49-156 30-132 (356)
457 4f3n_A Uncharacterized ACR, CO 81.8 0.86 3E-05 37.0 2.8 42 49-90 139-186 (432)
458 3qiv_A Short-chain dehydrogena 81.6 3.3 0.00011 30.4 5.9 74 49-123 10-96 (253)
459 4g65_A TRK system potassium up 81.4 7.7 0.00026 31.7 8.4 85 32-120 217-307 (461)
460 4fs3_A Enoyl-[acyl-carrier-pro 81.3 14 0.00048 27.2 10.2 74 48-122 6-95 (256)
461 3o38_A Short chain dehydrogena 81.3 5.1 0.00018 29.6 6.9 74 49-123 23-111 (266)
462 3zwc_A Peroxisomal bifunctiona 81.3 23 0.00078 30.9 11.6 99 49-161 317-433 (742)
463 3i83_A 2-dehydropantoate 2-red 81.1 5.9 0.0002 30.4 7.4 95 50-157 4-105 (320)
464 3d1l_A Putative NADP oxidoredu 81.0 14 0.00049 27.2 10.1 90 49-157 11-102 (266)
465 3tjr_A Short chain dehydrogena 80.9 4.2 0.00014 30.9 6.4 75 48-123 31-118 (301)
466 3ucx_A Short chain dehydrogena 80.9 5 0.00017 29.8 6.7 72 49-121 12-96 (264)
467 3abi_A Putative uncharacterize 80.7 4.5 0.00015 31.8 6.6 66 49-121 17-85 (365)
468 2ae2_A Protein (tropinone redu 80.6 2.9 0.0001 30.9 5.3 74 49-123 10-97 (260)
469 3ppi_A 3-hydroxyacyl-COA dehyd 80.2 5.3 0.00018 29.8 6.7 69 49-120 31-110 (281)
470 3oec_A Carveol dehydrogenase ( 79.9 7.4 0.00025 29.8 7.6 75 48-123 46-145 (317)
471 3ce6_A Adenosylhomocysteinase; 79.7 4.7 0.00016 33.3 6.6 89 47-159 273-363 (494)
472 1xu9_A Corticosteroid 11-beta- 79.6 4.2 0.00014 30.5 6.0 71 49-120 29-113 (286)
473 3qha_A Putative oxidoreductase 79.3 7.4 0.00025 29.5 7.3 87 50-157 17-105 (296)
474 3sju_A Keto reductase; short-c 79.1 6.5 0.00022 29.4 6.9 74 49-123 25-111 (279)
475 2wsb_A Galactitol dehydrogenas 79.0 9.9 0.00034 27.6 7.8 72 49-123 12-95 (254)
476 2nwq_A Probable short-chain de 78.9 7.1 0.00024 29.2 7.0 74 49-123 22-107 (272)
477 3b1f_A Putative prephenate deh 78.8 17 0.00058 27.2 9.2 87 50-154 8-98 (290)
478 3ktd_A Prephenate dehydrogenas 78.8 5.1 0.00017 31.4 6.3 87 49-153 9-97 (341)
479 3ged_A Short-chain dehydrogena 78.8 6.2 0.00021 29.3 6.5 71 49-123 3-85 (247)
480 2cvz_A Dehydrogenase, 3-hydrox 78.7 12 0.00042 27.9 8.4 85 50-156 3-89 (289)
481 3guy_A Short-chain dehydrogena 78.7 7.3 0.00025 28.0 6.9 71 50-123 3-82 (230)
482 4gkb_A 3-oxoacyl-[acyl-carrier 78.6 4.7 0.00016 30.1 5.9 75 48-123 7-93 (258)
483 2c07_A 3-oxoacyl-(acyl-carrier 78.6 4.8 0.00016 30.2 6.0 74 49-123 45-131 (285)
484 2vn8_A Reticulon-4-interacting 78.4 1.6 5.6E-05 34.4 3.4 93 47-157 183-280 (375)
485 3k6j_A Protein F01G10.3, confi 78.4 19 0.00063 29.5 9.7 96 49-159 55-168 (460)
486 3trk_A Nonstructural polyprote 78.2 1.5 5E-05 33.1 2.8 55 111-166 209-268 (324)
487 3h2s_A Putative NADH-flavin re 78.0 16 0.00054 25.9 10.1 99 50-157 2-104 (224)
488 3hn2_A 2-dehydropantoate 2-red 78.0 10 0.00035 28.9 7.8 93 50-156 4-102 (312)
489 2bgk_A Rhizome secoisolaricire 78.0 8.6 0.00029 28.4 7.3 73 49-122 17-101 (278)
490 3e8x_A Putative NAD-dependent 77.8 13 0.00043 26.8 8.0 69 48-122 21-93 (236)
491 2y0c_A BCEC, UDP-glucose dehyd 77.8 12 0.0004 30.8 8.4 103 48-155 8-126 (478)
492 3h7a_A Short chain dehydrogena 77.8 2.9 9.9E-05 30.9 4.5 74 49-123 8-93 (252)
493 1zk4_A R-specific alcohol dehy 77.8 7 0.00024 28.4 6.6 74 49-123 7-92 (251)
494 3rkr_A Short chain oxidoreduct 77.6 4.3 0.00015 30.0 5.5 75 48-123 29-116 (262)
495 3tri_A Pyrroline-5-carboxylate 77.6 14 0.00049 27.7 8.4 86 50-154 5-95 (280)
496 3f9i_A 3-oxoacyl-[acyl-carrier 77.5 7.8 0.00027 28.2 6.8 73 48-123 14-94 (249)
497 4e21_A 6-phosphogluconate dehy 77.2 7.5 0.00026 30.6 6.9 91 49-157 23-115 (358)
498 2pd4_A Enoyl-[acyl-carrier-pro 76.9 11 0.00037 28.0 7.5 71 49-123 7-94 (275)
499 3n74_A 3-ketoacyl-(acyl-carrie 76.7 9.9 0.00034 27.9 7.2 72 49-123 10-93 (261)
500 3lyl_A 3-oxoacyl-(acyl-carrier 76.6 6 0.00021 28.8 5.9 74 49-123 6-92 (247)
No 1
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.91 E-value=8.1e-24 Score=157.69 Aligned_cols=172 Identities=39% Similarity=0.720 Sum_probs=139.4
Q ss_pred CCCCChhchhhhhcccC--CceeeecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHH
Q 028547 8 QAYGEPWYWDNRYAHES--GPFDWYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEA 85 (207)
Q Consensus 8 ~~~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~ 85 (207)
+.|...+||+++|.... ..+.|+.....+...+...+.+.. +|||+|||+|.++..+++.+..+++++|+++.+++.
T Consensus 2 ~~~~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~ 80 (215)
T 2pxx_A 2 SGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPED-RILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAA 80 (215)
T ss_dssp GGGGCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCCTTC-CEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHH
T ss_pred CcccchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcCCCC-eEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHH
Confidence 46888999999998774 356787777777788877765555 999999999999999999876699999999999999
Q ss_pred HHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhccCCC--------ChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 86 MMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSN--------SRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 86 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~--------~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
++++.....++.+.++|+.+. +++.++||+|++..+++++.+... ...+...+++++.++|+|||.+++.+
T Consensus 81 a~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 81 MQACYAHVPQLRWETMDVRKL-DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HHHHTTTCTTCEEEECCTTSC-CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcccCCCcEEEEcchhcC-CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 999887656899999999987 577789999999999987732211 13577899999999999999999999
Q ss_pred eCCcccccccc-cCCCCceEEEEEE
Q 028547 158 YGAPIYRLGML-RDSCSWNIKLHVI 181 (207)
Q Consensus 158 ~~~~~~~~~~~-~~~~~~~~~~~~~ 181 (207)
+..+.....++ ...+.|.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (215)
T 2pxx_A 160 SAAPHFRTRHYAQAYYGWSLRHATY 184 (215)
T ss_dssp SCCHHHHHHHHCCGGGCEEEEEEEE
T ss_pred CCCcHHHHHHHhccccCcEEEEEEe
Confidence 88877666666 4445677654443
No 2
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.89 E-value=7.6e-23 Score=156.48 Aligned_cols=145 Identities=16% Similarity=0.266 Sum_probs=112.7
Q ss_pred CCCCCChhchhhhhcccCCceeeecCccCHHHHHHhhC-CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHH
Q 028547 7 TQAYGEPWYWDNRYAHESGPFDWYQKYPSLAPLIKLYV-PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEA 85 (207)
Q Consensus 7 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~ 85 (207)
+......+||+++|......|.+......+.+.+.... ...+.+|||+|||+|.++..+++.|+ +|+|+|+|+.+++.
T Consensus 27 ~~~~~~~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~ 105 (252)
T 2gb4_A 27 KNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIRE 105 (252)
T ss_dssp TTCCCCHHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHH
T ss_pred ccccCCHHHHHHHHhcCCCCcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHH
Confidence 44455689999999876555433333334455554432 22334999999999999999999988 99999999999999
Q ss_pred HHHHcc-------------------CCCCceEEEeccccccccCC-CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHH
Q 028547 86 MMKKYS-------------------NRPQLKYIKMDVRQMDEFQT-GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWR 145 (207)
Q Consensus 86 ~~~~~~-------------------~~~~~~~~~~d~~~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~ 145 (207)
++++.. ...++.|+++|+.++. ... ++||+|++..+++++ +..+...+++++.+
T Consensus 106 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~-~~~~~~FD~V~~~~~l~~l-----~~~~~~~~l~~~~~ 179 (252)
T 2gb4_A 106 FFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP-RANIGKFDRIWDRGALVAI-----NPGDHDRYADIILS 179 (252)
T ss_dssp HHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG-GGCCCCEEEEEESSSTTTS-----CGGGHHHHHHHHHH
T ss_pred HHHhcccccccccccccccccccccCCCceEEEECccccCC-cccCCCEEEEEEhhhhhhC-----CHHHHHHHHHHHHH
Confidence 987653 1257999999999983 443 799999999999887 55678899999999
Q ss_pred hcCCCcEEEEEEe
Q 028547 146 VLKDKGVYILVTY 158 (207)
Q Consensus 146 ~L~pgG~~~~~~~ 158 (207)
+|+|||.++++++
T Consensus 180 ~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 180 LLRKEFQYLVAVL 192 (252)
T ss_dssp TEEEEEEEEEEEE
T ss_pred HcCCCeEEEEEEE
Confidence 9999999976653
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.85 E-value=9.3e-21 Score=140.52 Aligned_cols=115 Identities=17% Similarity=0.249 Sum_probs=94.6
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--------------CCCceEEEe
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--------------RPQLKYIKM 101 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--------------~~~~~~~~~ 101 (207)
+.+++..+....+.+|||+|||+|.++..+++.|+ +|+|+|+|+.+++.++++... ..+++++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 45555554333445999999999999999999987 999999999999999988542 358999999
Q ss_pred ccccccccCC-CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 102 DVRQMDEFQT-GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 102 d~~~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|+.++ ++.. ++||+|++..+++++ +..+...++++++++|||||.+++.+
T Consensus 90 d~~~l-~~~~~~~fD~v~~~~~l~~l-----~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 90 DFFAL-TARDIGHCAAFYDRAAMIAL-----PADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp CCSSS-THHHHHSEEEEEEESCGGGS-----CHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ccccC-CcccCCCEEEEEECcchhhC-----CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 99998 4444 789999999899887 45677889999999999999855554
No 4
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.84 E-value=6.7e-21 Score=146.00 Aligned_cols=112 Identities=21% Similarity=0.335 Sum_probs=96.5
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCe
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~f 114 (207)
.+.+.+....+... +|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++ .+++.++++|+.++ ++++++|
T Consensus 28 ~l~~~l~~~~~~~~-~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~----~~~v~~~~~~~e~~-~~~~~sf 100 (257)
T 4hg2_A 28 ALFRWLGEVAPARG-DALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR----HPRVTYAVAPAEDT-GLPPASV 100 (257)
T ss_dssp HHHHHHHHHSSCSS-EEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC----CTTEEEEECCTTCC-CCCSSCE
T ss_pred HHHHHHHHhcCCCC-CEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh----cCCceeehhhhhhh-cccCCcc
Confidence 45666666666665 999999999999999999876 99999999999987654 36899999999998 6899999
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|+|++..++|++ +...++++++++|||||.|.+..+...
T Consensus 101 D~v~~~~~~h~~--------~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 101 DVAIAAQAMHWF--------DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEEEECSCCTTC--------CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cEEEEeeehhHh--------hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 999999999886 467899999999999999999887544
No 5
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.83 E-value=1.9e-20 Score=143.06 Aligned_cols=103 Identities=18% Similarity=0.377 Sum_probs=93.6
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++.. ..++.++++|+.+. +++.++||+|++..+++++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-SPVVCYEQKAIEDI-AIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-CTTEEEEECCGGGC-CCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-cCCeEEEEcchhhC-CCCCCCeEEEEEchhhhhh
Confidence 445999999999999999999876799999999999999999886 46899999999987 5778999999999999998
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.+...++++++++|+|||.+++.+.
T Consensus 122 -------~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 122 -------ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 7899999999999999999999764
No 6
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.83 E-value=2.8e-20 Score=140.69 Aligned_cols=139 Identities=22% Similarity=0.318 Sum_probs=111.9
Q ss_pred hhchhhhhcccCCceeeecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC
Q 028547 13 PWYWDNRYAHESGPFDWYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 13 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~ 92 (207)
.++|++.|......|........+..++.....+.. +|||+|||+|.++..+++.+. +|+++|+++.+++.++++...
T Consensus 33 ~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~ 110 (235)
T 3lcc_A 33 EGGWEKCWEEEITPWDQGRATPLIVHLVDTSSLPLG-RALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGS 110 (235)
T ss_dssp HHHHHHHHHTTCCTTCCSSCCHHHHHHHHTTCSCCE-EEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcccCCCCHHHHHHHHhcCCCCC-CEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhc
Confidence 568999998765554333333345555555444444 999999999999999988766 899999999999999998865
Q ss_pred C---CCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 93 R---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 93 ~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
. .++.|+++|+.+.. +.++||+|++..+++++ +..+...+++++.++|+|||.+++..+..
T Consensus 111 ~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 111 SPKAEYFSFVKEDVFTWR--PTELFDLIFDYVFFCAI-----EPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp SGGGGGEEEECCCTTTCC--CSSCEEEEEEESSTTTS-----CGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cCCCcceEEEECchhcCC--CCCCeeEEEEChhhhcC-----CHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 2 46899999999973 55699999999999988 45689999999999999999999987644
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.83 E-value=4.9e-20 Score=139.75 Aligned_cols=118 Identities=28% Similarity=0.515 Sum_probs=102.9
Q ss_pred ccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCC
Q 028547 33 YPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 33 ~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 112 (207)
...+...+...+++.. +|||+|||+|.++..+++.+. +++++|+++.+++.++++... .++.+++.|+.+. +++.+
T Consensus 40 ~~~~~~~l~~~~~~~~-~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~-~~~~~ 115 (242)
T 3l8d_A 40 RSTIIPFFEQYVKKEA-EVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEG-PDLSFIKGDLSSL-PFENE 115 (242)
T ss_dssp TTTHHHHHHHHSCTTC-EEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCB-TTEEEEECBTTBC-SSCTT
T ss_pred HHHHHHHHHHHcCCCC-eEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhccc-CCceEEEcchhcC-CCCCC
Confidence 3456777777777665 999999999999999999976 999999999999999988533 6899999999988 57789
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+||+|++..+++++ .+...+++++.++|+|||.+++.++...
T Consensus 116 ~fD~v~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 116 QFEAIMAINSLEWT-------EEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp CEEEEEEESCTTSS-------SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CccEEEEcChHhhc-------cCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 99999999999998 7888999999999999999999886443
No 8
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.83 E-value=1.2e-19 Score=139.45 Aligned_cols=112 Identities=19% Similarity=0.251 Sum_probs=93.1
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC---CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCC
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY---EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~ 112 (207)
+++.++++.. +|||+|||+|.++..+++... .+|+|+|+|+.+++.|++++... .++.|+++|+.++ + .+
T Consensus 63 l~~~~~~~~~-~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-~--~~ 138 (261)
T 4gek_A 63 LAERFVQPGT-QVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-A--IE 138 (261)
T ss_dssp HHHHHCCTTC-EEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-C--CC
T ss_pred HHHHhCCCCC-EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-c--cc
Confidence 3444555555 999999999999999988631 38999999999999999987532 4799999999887 3 35
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+||+|++..+++++ +..+...++++++++|+|||.|++....
T Consensus 139 ~~d~v~~~~~l~~~-----~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 139 NASMVVLNFTLQFL-----EPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp SEEEEEEESCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccccceeeeeeeec-----CchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 79999999999988 5567788999999999999999998753
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.82 E-value=3.1e-20 Score=141.09 Aligned_cols=101 Identities=19% Similarity=0.287 Sum_probs=91.6
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhcc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLC 128 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~ 128 (207)
.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++... ++.+++.|+.+. .++++||+|++..+++|+
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~--~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~-- 116 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD--GITYIHSRFEDA--QLPRRYDNIVLTHVLEHI-- 116 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS--CEEEEESCGGGC--CCSSCEEEEEEESCGGGC--
T ss_pred CcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC--CeEEEEccHHHc--CcCCcccEEEEhhHHHhh--
Confidence 4999999999999999999877 999999999999999998765 799999999887 367899999999999998
Q ss_pred CCCChhhHHHHHHHHH-HhcCCCcEEEEEEeCCc
Q 028547 129 GSNSRQNATQMLKEVW-RVLKDKGVYILVTYGAP 161 (207)
Q Consensus 129 ~~~~~~~~~~~l~~~~-~~L~pgG~~~~~~~~~~ 161 (207)
.+...+++++. ++|+|||.+++.+....
T Consensus 117 -----~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 117 -----DDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp -----SSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred -----cCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 78899999999 99999999999886543
No 10
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.81 E-value=1e-18 Score=128.45 Aligned_cols=132 Identities=19% Similarity=0.288 Sum_probs=105.1
Q ss_pred CCCChhchhhhhcccCCceeeecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHH
Q 028547 9 AYGEPWYWDNRYAHESGPFDWYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMK 88 (207)
Q Consensus 9 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~ 88 (207)
.+....||...|..... . ..++......++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~-------~---~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~ 72 (199)
T 2xvm_A 4 VIRDENYFTDKYELTRT-------H---SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVER 72 (199)
T ss_dssp CCCCTTHHHHHHTCCCC-------C---HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred EEechHHHhhhhccccc-------c---HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHH
Confidence 35667899988865321 1 2333333223345999999999999999999876 99999999999999998
Q ss_pred HccC--CCCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 89 KYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 89 ~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+... ..++.+.+.|+.+. ++ .++||+|++..+++++ +..+...+++++.++|+|||.+++.+.
T Consensus 73 ~~~~~~~~~~~~~~~d~~~~-~~-~~~~D~v~~~~~l~~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 73 IKSIENLDNLHTRVVDLNNL-TF-DRQYDFILSTVVLMFL-----EAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp HHHHHTCTTEEEEECCGGGC-CC-CCCEEEEEEESCGGGS-----CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHhCCCCCcEEEEcchhhC-CC-CCCceEEEEcchhhhC-----CHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 7652 24799999999987 45 7899999999999987 445889999999999999999888664
No 11
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.81 E-value=4.1e-19 Score=132.84 Aligned_cols=116 Identities=14% Similarity=0.205 Sum_probs=96.5
Q ss_pred cCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCC
Q 028547 34 PSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 34 ~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 113 (207)
..+..+++.....++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.. .++.+.++|+.+. +++ ++
T Consensus 32 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~d~~~~-~~~-~~ 106 (220)
T 3hnr_A 32 AHYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP--KEFSITEGDFLSF-EVP-TS 106 (220)
T ss_dssp TTHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC--TTCCEESCCSSSC-CCC-SC
T ss_pred HHHHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC--CceEEEeCChhhc-CCC-CC
Confidence 3445666655444555999999999999999999876 99999999999999999876 4789999999998 455 89
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
||+|++..+++++ +......+++++.++|+|||.+++.+..
T Consensus 107 fD~v~~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 107 IDTIVSTYAFHHL-----TDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp CSEEEEESCGGGS-----CHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred eEEEEECcchhcC-----ChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 9999999999998 2233344999999999999999998743
No 12
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=2.8e-19 Score=132.21 Aligned_cols=115 Identities=13% Similarity=0.239 Sum_probs=98.0
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeE
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
..++..+....+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++. +++.++++|+.+. +++.++||+
T Consensus 31 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~-~~~~~~fD~ 105 (203)
T 3h2b_A 31 RVLIEPWATGVDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH---PSVTFHHGTITDL-SDSPKRWAG 105 (203)
T ss_dssp HHHHHHHHHHCCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC---TTSEEECCCGGGG-GGSCCCEEE
T ss_pred HHHHHHHhccCCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC---CCCeEEeCccccc-ccCCCCeEE
Confidence 4444444333345999999999999999999977 9999999999999999985 4789999999997 577899999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|++..+++++ +.++...+++++.++|+|||.+++.++...
T Consensus 106 v~~~~~l~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 106 LLAWYSLIHM-----GPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp EEEESSSTTC-----CTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred EEehhhHhcC-----CHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 9999999988 445899999999999999999999886554
No 13
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.80 E-value=5.2e-19 Score=131.98 Aligned_cols=141 Identities=16% Similarity=0.242 Sum_probs=108.7
Q ss_pred CChhchhhhhcccCCceeeecCc---cCHHHHHHhhCCCC-CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHH
Q 028547 11 GEPWYWDNRYAHESGPFDWYQKY---PSLAPLIKLYVPSH-HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAM 86 (207)
Q Consensus 11 ~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~-~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~ 86 (207)
...++|++.|... +.|.+.... ..+..++....... +.+|||+|||+|.++..+++.+. +++++|+++.+++.+
T Consensus 12 ~~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a 89 (216)
T 3ofk_A 12 NTYQSLERELAND-DPWRLDDNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRA 89 (216)
T ss_dssp SHHHHHHHHHTSS-SGGGTTTCHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHH
T ss_pred chHHHHHHHhcCC-CCcccccCHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHH
Confidence 3467888888764 223222111 12344555444433 35999999999999999999875 999999999999999
Q ss_pred HHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 87 MKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 87 ~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+++.....++.+++.|+.+.. +.++||+|++..+++++ .+......+++++.++|+|||.+++.+..
T Consensus 90 ~~~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 90 CQRTKRWSHISWAATDILQFS--TAELFDLIVVAEVLYYL----EDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp HHHTTTCSSEEEEECCTTTCC--CSCCEEEEEEESCGGGS----SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHhcccCCCeEEEEcchhhCC--CCCCccEEEEccHHHhC----CCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999877678999999999984 67899999999999998 11244578899999999999999997743
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.80 E-value=5.1e-19 Score=135.70 Aligned_cols=115 Identities=23% Similarity=0.346 Sum_probs=98.7
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCC
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~ 112 (207)
.+..++......++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++... .+++.+.++|+.++ +++++
T Consensus 25 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l-~~~~~ 102 (260)
T 1vl5_A 25 DLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-PFTDE 102 (260)
T ss_dssp CHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-CSCTT
T ss_pred HHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC-CCCCC
Confidence 456666665545556999999999999999999876 999999999999999988652 25799999999987 67889
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+||+|++..+++++ .+...+++++.++|+|||.+++...
T Consensus 103 ~fD~V~~~~~l~~~-------~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 103 RFHIVTCRIAAHHF-------PNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CEEEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEEEhhhhHhc-------CCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999999999998 7889999999999999999999764
No 15
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.80 E-value=5.7e-19 Score=133.05 Aligned_cols=135 Identities=27% Similarity=0.469 Sum_probs=97.5
Q ss_pred hhchhhhhcccCCceeeecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC
Q 028547 13 PWYWDNRYAHESGPFDWYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 13 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~ 92 (207)
..||+..+..... ....+...+...+++.. +|||+|||+|.++..+++.+. +++++|+++.+++.++++...
T Consensus 3 ~~yw~~~~~~~~~------~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 3 ESYWEKVSGKNIP------SSLDLYPIIHNYLQEDD-EILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARS 74 (235)
T ss_dssp ---------------------CCCCTTHHHHCCTTC-EEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTC
T ss_pred hhHHHHHhhccCC------CHHHHHHHHHHhCCCCC-eEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHh
Confidence 5688877764321 11122334555555555 999999999999999999976 999999999999999998764
Q ss_pred C-------CCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 93 R-------PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 93 ~-------~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
. .++.+.+.|+.+. +++.++||+|++..+++++ .+......+++++.++|+|||.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 75 PGLNQKTGGKAEFKVENASSL-SFHDSSFDFAVMQAFLTSV----PDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CSCCSSSSCEEEEEECCTTSC-CSCTTCEEEEEEESCGGGC----CCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cCCccccCcceEEEEeccccc-CCCCCceeEEEEcchhhcC----CCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 3 1578999999987 5778899999999999987 122334499999999999999999988644
No 16
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.79 E-value=1e-19 Score=140.10 Aligned_cols=147 Identities=15% Similarity=0.139 Sum_probs=102.7
Q ss_pred CCCChhchhhhhcccCCceeeecCccCHHHHHHhhC---CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHH
Q 028547 9 AYGEPWYWDNRYAHESGPFDWYQKYPSLAPLIKLYV---PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEA 85 (207)
Q Consensus 9 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~ 85 (207)
.|+...||+.+|......+.-....+-+...+..+. ..++.+|||||||+|.++..++..++.+|+|+|+|+.+++.
T Consensus 14 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~ 93 (263)
T 2a14_A 14 HFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREE 93 (263)
T ss_dssp HCCHHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHH
T ss_pred ccCHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHH
Confidence 356678888888765433210000001112222221 22334999999999999888888776689999999999999
Q ss_pred HHHHccCCC-------------------------------Cce-EEEecccccccc---CCCCeeEEEeCcchhhhccCC
Q 028547 86 MMKKYSNRP-------------------------------QLK-YIKMDVRQMDEF---QTGSFDSVVDKGTLDSLLCGS 130 (207)
Q Consensus 86 ~~~~~~~~~-------------------------------~~~-~~~~d~~~~~~~---~~~~fD~v~~~~~l~~~~~~~ 130 (207)
+++++...+ ++. ++++|+.+..++ ..++||+|++..+++++.
T Consensus 94 a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~--- 170 (263)
T 2a14_A 94 LEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECAC--- 170 (263)
T ss_dssp HHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC---
T ss_pred HHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhc---
Confidence 988654321 122 888999885443 256899999999999861
Q ss_pred CChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 131 NSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 131 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
....+...++++++++|||||.|++.+.
T Consensus 171 ~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 171 CSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp SSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1236778999999999999999999874
No 17
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.79 E-value=1.3e-18 Score=133.49 Aligned_cols=115 Identities=18% Similarity=0.345 Sum_probs=98.9
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEE
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
++..+..+++.+|||+|||+|.++..+++. +. +|+++|+++.+++.++++.....++.+++.|+.+. +++.++||+|
T Consensus 47 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v 124 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILTK-EFPENNFDLI 124 (266)
T ss_dssp HTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC-CCCTTCEEEE
T ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC-CCCCCcEEEE
Confidence 333333334459999999999999999987 55 99999999999999999887557899999999998 6788999999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++..+++++ +..+...+++++.++|+|||.+++.++..
T Consensus 125 ~~~~~l~~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 125 YSRDAILAL-----SLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEESCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eHHHHHHhc-----ChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 999999998 66899999999999999999999988543
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.78 E-value=1.9e-18 Score=130.46 Aligned_cols=106 Identities=22% Similarity=0.420 Sum_probs=91.9
Q ss_pred CCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++....++.++++|+.+. +++ ++||+|++..+++++
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~-~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKY-DFE-EKYDMVVSALSIHHL 122 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTC-CCC-SCEEEEEEESCGGGS
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhcc-CCC-CCceEEEEeCccccC
Confidence 3599999999999999999984 2499999999999999999987666899999999998 344 899999999999998
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+......++++++++|+|||.+++.+...
T Consensus 123 -----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 123 -----EDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp -----CHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -----CHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 33455579999999999999999988543
No 19
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.78 E-value=5.5e-19 Score=131.68 Aligned_cols=142 Identities=18% Similarity=0.295 Sum_probs=107.0
Q ss_pred CCCCCCCCCC--hhchhhhhcccCCceeeecCccCHH-HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCC
Q 028547 3 MGTTTQAYGE--PWYWDNRYAHESGPFDWYQKYPSLA-PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDIS 79 (207)
Q Consensus 3 m~~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s 79 (207)
|..+...|.. ..+|+..+...... .+..+. .++.....++. +|||+|||+|.++..+++....+++++|++
T Consensus 2 M~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s 75 (219)
T 3dlc_A 2 MSENKKKFDKKGAKNMDEISKTLFAP-----IYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFS 75 (219)
T ss_dssp CCCCCCTTSHHHHHHHHHHHHTTTTT-----HHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESC
T ss_pred ccchhhhhhhcchhhHHHHHHHhhcc-----ccHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECC
Confidence 4455555555 34455555432111 112222 33344444455 999999999999999998732499999999
Q ss_pred HHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 80 SVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 80 ~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
+.+++.+++++... .++.+.+.|+.+. +++.++||+|++..+++++ .+...+++++.++|+|||.+++.
T Consensus 76 ~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 76 KHMNEIALKNIADANLNDRIQIVQGDVHNI-PIEDNYADLIVSRGSVFFW-------EDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp HHHHHHHHHHHHHTTCTTTEEEEECBTTBC-SSCTTCEEEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhccccCceEEEEcCHHHC-CCCcccccEEEECchHhhc-------cCHHHHHHHHHHhCCCCCEEEEE
Confidence 99999999986532 4799999999987 5778899999999999998 88899999999999999999997
Q ss_pred Ee
Q 028547 157 TY 158 (207)
Q Consensus 157 ~~ 158 (207)
..
T Consensus 148 ~~ 149 (219)
T 3dlc_A 148 GG 149 (219)
T ss_dssp EC
T ss_pred ec
Confidence 63
No 20
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.78 E-value=1.7e-18 Score=127.90 Aligned_cols=133 Identities=20% Similarity=0.332 Sum_probs=102.8
Q ss_pred chhhhhcccCCceeeecC-ccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC
Q 028547 15 YWDNRYAHESGPFDWYQK-YPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR 93 (207)
Q Consensus 15 ~w~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~ 93 (207)
||+++|...... |... ...+..++... + +. +|||+|||+|.++..+++.+. +++++|+++.+++.++++....
T Consensus 1 ~W~~~y~~~~~~--~~~~~~~~l~~~~~~~-~-~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~ 74 (202)
T 2kw5_A 1 MWDERFSQSEYV--YGTEPNDFLVSVANQI-P-QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEK 74 (202)
T ss_dssp CCCCCCCCCCCC--CCCCCCSSHHHHHHHS-C-SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHH
T ss_pred Chhhhhcccchh--hccCchHHHHHHHHhC-C-CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhc
Confidence 688888765322 2222 23455555543 3 34 999999999999999999876 9999999999999999886532
Q ss_pred -CCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 94 -PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 94 -~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
.++.+.+.|+.+. +++.++||+|++.. .++ ...+...+++++.++|+|||.+++.++...
T Consensus 75 ~~~~~~~~~d~~~~-~~~~~~fD~v~~~~--~~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 75 GVKITTVQSNLADF-DIVADAWEGIVSIF--CHL-----PSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp TCCEEEECCBTTTB-SCCTTTCSEEEEEC--CCC-----CHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred CCceEEEEcChhhc-CCCcCCccEEEEEh--hcC-----CHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 3789999999987 56778999999853 222 347889999999999999999999986544
No 21
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.78 E-value=1.9e-18 Score=131.90 Aligned_cols=115 Identities=15% Similarity=0.202 Sum_probs=97.7
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEE
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
.++..+...++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++.....++.+++.|+.+. +++.++||+|
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v 162 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA-TLPPNTYDLI 162 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC-CCCSSCEEEE
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHC-CCCCCCeEEE
Confidence 344444333445999999999999999988866579999999999999999887556789999999987 5677899999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++..+++++ +..+...+++++.++|+|||.+++.+.
T Consensus 163 ~~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 163 VIQWTAIYL-----TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEESCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhhC-----CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 999999988 446789999999999999999999874
No 22
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.78 E-value=1.8e-18 Score=134.41 Aligned_cols=114 Identities=20% Similarity=0.383 Sum_probs=97.6
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCe
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~f 114 (207)
.++..+..+. .+|||+|||+|.++..+++.+. +++++|+++.+++.+++++... .++.++++|+.+..++..++|
T Consensus 60 ~~l~~~~~~~-~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 60 RVLAEMGPQK-LRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp HHHHHTCSSC-CEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCE
T ss_pred HHHHhcCCCC-CEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCc
Confidence 4444444444 4999999999999999999876 9999999999999999987643 478999999999854678999
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|+|++..+++++ .+...+++++.++|+|||.+++.++..
T Consensus 138 D~v~~~~~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 138 DLILFHAVLEWV-------ADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp EEEEEESCGGGC-------SCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred eEEEECchhhcc-------cCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 999999999998 788999999999999999999988643
No 23
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.78 E-value=1.2e-18 Score=132.21 Aligned_cols=101 Identities=20% Similarity=0.346 Sum_probs=89.3
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc-cccCCCCeeEEEeCcchhhhc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM-DEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~fD~v~~~~~l~~~~ 127 (207)
.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ +.++..|+.+. .++++++||+|++..+++++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~- 114 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHL- 114 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGS-
T ss_pred CeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh------cceeeccHHHHhhhcCCCCeeEEEECCchhhC-
Confidence 4999999999999999999877 899999999999999875 68899998885 25678999999999999998
Q ss_pred cCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 128 CGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 128 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+..+...+++++.++|+|||.+++.+....
T Consensus 115 ----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 115 ----DPERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp ----CGGGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred ----CcHHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 445779999999999999999999886543
No 24
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.78 E-value=3.9e-18 Score=129.22 Aligned_cols=111 Identities=19% Similarity=0.367 Sum_probs=95.5
Q ss_pred HHHhhCC-CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEE
Q 028547 39 LIKLYVP-SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 39 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
.+...++ .++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++... .++.+.+.|+.+. +++.++||+|
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~-~~~~~~fD~v 111 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-TGITYERADLDKL-HLPQDSFDLA 111 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-SSEEEEECCGGGC-CCCTTCEEEE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-CCceEEEcChhhc-cCCCCCceEE
Confidence 3444444 34459999999999999999998666999999999999999998765 4789999999987 5677899999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++..+++++ .+...++++++++|+|||.+++.+.
T Consensus 112 ~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 112 YSSLALHYV-------EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEecccccc-------chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 999999988 6889999999999999999999874
No 25
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.77 E-value=4.4e-19 Score=136.13 Aligned_cols=146 Identities=15% Similarity=0.198 Sum_probs=105.2
Q ss_pred CCChhchhhhhcccCCceeee--cCc--cCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHH
Q 028547 10 YGEPWYWDNRYAHESGPFDWY--QKY--PSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEA 85 (207)
Q Consensus 10 ~~~~~~w~~~~~~~~~~~~~~--~~~--~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~ 85 (207)
|....||+.+|......+... ... +.+..++.. ...++.+|||+|||+|.++..++..+..+|+++|+++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~ 94 (265)
T 2i62_A 16 FNPRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWE 94 (265)
T ss_dssp CCHHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHH
T ss_pred cCHHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHH
Confidence 455678888887654332110 000 011122222 122334999999999999999988865689999999999999
Q ss_pred HHHHccCCCC-------------------------------c-eEEEeccccccccCC---CCeeEEEeCcchhhhccCC
Q 028547 86 MMKKYSNRPQ-------------------------------L-KYIKMDVRQMDEFQT---GSFDSVVDKGTLDSLLCGS 130 (207)
Q Consensus 86 ~~~~~~~~~~-------------------------------~-~~~~~d~~~~~~~~~---~~fD~v~~~~~l~~~~~~~ 130 (207)
+++++..... + .+.++|+.+..+.+. ++||+|++..+++++.
T Consensus 95 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~--- 171 (265)
T 2i62_A 95 LQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC--- 171 (265)
T ss_dssp HHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC---
T ss_pred HHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc---
Confidence 9988765321 6 899999998744445 7999999999999541
Q ss_pred CChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 131 NSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 131 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
....+...+++++.++|+|||.+++.+..
T Consensus 172 ~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 172 PDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp SSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 11268899999999999999999998743
No 26
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=2.9e-18 Score=130.36 Aligned_cols=105 Identities=13% Similarity=0.182 Sum_probs=91.0
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC-----CCCeeEEEeCcch
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ-----TGSFDSVVDKGTL 123 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~fD~v~~~~~l 123 (207)
.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++... .++.++++|+.+.. .. ...||+|++..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~-~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA-ANISYRLLDGLVPE-QAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC-TTEEEEECCTTCHH-HHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc-cCceEEECcccccc-cccccccccCccEEEEcchh
Confidence 4999999999999999999877 999999999999999998843 58999999999862 21 1248999999999
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+++ +..+...+++++.++|+|||.+++..+..+
T Consensus 135 ~~~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 135 HHI-----PVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp TTS-----CGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred hcC-----CHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 988 445889999999999999999999887554
No 27
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.6e-18 Score=135.72 Aligned_cols=137 Identities=13% Similarity=0.291 Sum_probs=104.8
Q ss_pred CCCChhchhhhhcccCCceeeecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc--CCCcEEEEeCCHHHHHHH
Q 028547 9 AYGEPWYWDNRYAHESGPFDWYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD--GYEDVVNVDISSVVIEAM 86 (207)
Q Consensus 9 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~i~~~ 86 (207)
.|.+..|-.+.|......+ ...+.+.+..+...++.+|||+|||+|.++..+++. ...+|+|+|+++.+++.+
T Consensus 3 ~f~~~~~~~~~y~~~rp~y-----~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a 77 (299)
T 3g5t_A 3 TFSASDFNSERYSSSRPSY-----PSDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTA 77 (299)
T ss_dssp GGGSTTCCHHHHHHHSCCC-----CHHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHH
T ss_pred cccccccChHHHhhcCCCC-----CHHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHH
Confidence 3455555555554332111 223556666655545559999999999999999963 345999999999999999
Q ss_pred HHHccC----CCCceEEEeccccccccCC------CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 87 MKKYSN----RPQLKYIKMDVRQMDEFQT------GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 87 ~~~~~~----~~~~~~~~~d~~~~~~~~~------~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
+++... ..++.|+++|+.++ ++.. ++||+|++..+++++ +...+++++.++|+|||.+++.
T Consensus 78 ~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~~~fD~V~~~~~l~~~--------~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 78 EVIKEGSPDTYKNVSFKISSSDDF-KFLGADSVDKQKIDMITAVECAHWF--------DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp HHHHHHCC-CCTTEEEEECCTTCC-GGGCTTTTTSSCEEEEEEESCGGGS--------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhccCCCCceEEEEcCHHhC-CccccccccCCCeeEEeHhhHHHHh--------CHHHHHHHHHHhcCCCcEEEEE
Confidence 998643 36899999999987 4565 799999999999975 6789999999999999999986
Q ss_pred EeC
Q 028547 157 TYG 159 (207)
Q Consensus 157 ~~~ 159 (207)
.+.
T Consensus 149 ~~~ 151 (299)
T 3g5t_A 149 GYA 151 (299)
T ss_dssp EEE
T ss_pred ecC
Confidence 543
No 28
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.77 E-value=2.8e-18 Score=127.57 Aligned_cols=100 Identities=25% Similarity=0.422 Sum_probs=89.9
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhcc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLC 128 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~ 128 (207)
.+|||+|||+|.++..+++.+. +++++|+++.+++.++++. ++.+.+.|+.+. + ..++||+|++..+++++
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~d~~~~-~-~~~~fD~v~~~~~l~~~-- 115 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL----GRPVRTMLFHQL-D-AIDAYDAVWAHACLLHV-- 115 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH----TSCCEECCGGGC-C-CCSCEEEEEECSCGGGS--
T ss_pred CcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc----CCceEEeeeccC-C-CCCcEEEEEecCchhhc--
Confidence 4999999999999999999876 9999999999999999986 578899999988 3 67899999999999998
Q ss_pred CCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 129 GSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 129 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+..+...+++++.++|+|||.+++.....
T Consensus 116 ---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 116 ---PRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp ---CHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ---CHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 45588999999999999999999987543
No 29
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.77 E-value=3.8e-18 Score=129.41 Aligned_cols=115 Identities=20% Similarity=0.286 Sum_probs=98.5
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCe
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~f 114 (207)
...+.....+++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++... ..++.+.+.|+.++ ++++++|
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~f 88 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-PFPDDSF 88 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-CSCTTCE
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC-CCCCCcE
Confidence 4455555555556999999999999999999876 999999999999999987652 25799999999887 6778899
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|+|++..+++++ .+...+++++.++|+|||.+++.....
T Consensus 89 D~v~~~~~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 89 DIITCRYAAHHF-------SDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp EEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EEEEECCchhhc-------cCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999999998 788999999999999999999987543
No 30
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.77 E-value=3e-18 Score=134.06 Aligned_cols=119 Identities=17% Similarity=0.290 Sum_probs=97.7
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-----CCceEEEeccccccccC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-----PQLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-----~~~~~~~~d~~~~~~~~ 110 (207)
+..++..+..+.. +|||+|||+|.++..+++.+. +|+++|+++.+++.++++.... .++.++++|+.++ ++
T Consensus 72 ~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~~- 147 (299)
T 3g2m_A 72 AREFATRTGPVSG-PVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-AL- 147 (299)
T ss_dssp HHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-CC-
T ss_pred HHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-Cc-
Confidence 3445555544555 999999999999999999876 9999999999999999987653 4799999999997 44
Q ss_pred CCCeeEEEeC-cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCccc
Q 028547 111 TGSFDSVVDK-GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPIY 163 (207)
Q Consensus 111 ~~~fD~v~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~ 163 (207)
.++||+|++. .+++++ +..+...+++++.++|+|||.+++.++.....
T Consensus 148 ~~~fD~v~~~~~~~~~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 148 DKRFGTVVISSGSINEL-----DEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp SCCEEEEEECHHHHTTS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred CCCcCEEEECCcccccC-----CHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 6899988864 556655 44678999999999999999999998766543
No 31
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.77 E-value=1.2e-18 Score=132.32 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=90.8
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
+.+|||+|||+|.++..+++.+..+++++|+++.+++.+++++... .++.+++.|+.+. +++.++||+|++..++++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF-TPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC-CCCSSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc-CCCCCCEEEEEEcchhhh
Confidence 4599999999999999998886569999999999999999987642 3688999998887 456678999999999998
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+ +......+++++.++|+|||.+++.+..
T Consensus 159 ~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 159 L-----TDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp S-----CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C-----CHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 8 3344669999999999999999997753
No 32
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.77 E-value=3.6e-18 Score=127.56 Aligned_cols=117 Identities=15% Similarity=0.196 Sum_probs=98.9
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-C-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-Y-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQT 111 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~ 111 (207)
...++..+...++.+|||+|||+|.++..+++.+ . .+++++|+++.+++.+++++.. ..++.+.+.|+.+. +++.
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~ 104 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI-PLPD 104 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC-SSCS
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC-CCCC
Confidence 3455555544445599999999999999999875 2 4999999999999999998652 24799999999987 5778
Q ss_pred CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 112 GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++||+|++..+++++ .+...+++++.++|+|||.+++.++..
T Consensus 105 ~~fD~v~~~~~l~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 105 NTVDFIFMAFTFHEL-------SEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp SCEEEEEEESCGGGC-------SSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCeeEEEeehhhhhc-------CCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 899999999999998 788999999999999999999987643
No 33
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.77 E-value=1.7e-18 Score=133.28 Aligned_cols=103 Identities=17% Similarity=0.247 Sum_probs=90.7
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.++++.... .++.+++.|+.+. +++.++||+|++..++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL-PFRNEELDLIWSEGAI 124 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CCCTTCEEEEEESSCG
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC-CCCCCCEEEEEEcCCc
Confidence 34599999999999999999985569999999999999999986532 4699999999887 5778899999999999
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+++ +...+++++.++|+|||.+++.+.
T Consensus 125 ~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 125 YNI--------GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp GGT--------CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred eec--------CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 986 468899999999999999999874
No 34
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=5.6e-18 Score=131.26 Aligned_cols=110 Identities=24% Similarity=0.461 Sum_probs=94.0
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEE
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
.++..+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++. +++.+.++|+.++ ++ .++||+|
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~-~~-~~~fD~v 121 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY---PHLHFDVADARNF-RV-DKPLDAV 121 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC---TTSCEEECCTTTC-CC-SSCEEEE
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC---CCCEEEECChhhC-Cc-CCCcCEE
Confidence 344444334445999999999999999999655 9999999999999999886 5789999999987 44 5799999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++..+++++ .+...++++++++|+|||.+++.+...
T Consensus 122 ~~~~~l~~~-------~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 122 FSNAMLHWV-------KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEcchhhhC-------cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 999999998 788999999999999999999987654
No 35
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.76 E-value=9.5e-18 Score=125.28 Aligned_cols=106 Identities=16% Similarity=0.306 Sum_probs=89.9
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-------CCceEEEeccccccccCCCCeeEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-------PQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
.++.+|||+|||+|.++..+++.+. .+++++|+++.+++.+++++... .++.++++|+... +...++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-DKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-CGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-cccCCCcCEE
Confidence 3445999999999999999999764 59999999999999999987633 2799999998766 4566899999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
++..+++++ +..+...+++++.++|+|||.+++..
T Consensus 107 ~~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 107 TVIEVIEHL-----DLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEESCGGGC-----CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eeHHHHHcC-----CHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999999998 44566999999999999999776654
No 36
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.76 E-value=4.7e-18 Score=132.73 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=92.1
Q ss_pred CCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccC--C-CCceEEEeccccccccCCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSN--R-PQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~--~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
.++.+|||+|||+|.++..+++. +. +++++|+++.+++.++++... . .++.+.++|+.++ ++++++||+|++..
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-PCEDNSYDFIWSQD 158 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-SSCTTCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-CCCCCCEeEEEecc
Confidence 34459999999999999999887 55 999999999999999987642 1 4799999999987 67888999999999
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+++++ .+...+++++.++|+|||.+++.+..
T Consensus 159 ~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 159 AFLHS-------PDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp CGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhhhc-------CCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 99998 67899999999999999999998753
No 37
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.75 E-value=2.3e-18 Score=132.32 Aligned_cols=115 Identities=17% Similarity=0.232 Sum_probs=95.7
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCe
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~f 114 (207)
.+...+....++.. +|||+|||+|.++..+++.+. +++++|+++.+++.++++.. ++.++++|+.+. +. .++|
T Consensus 39 ~~~~~l~~~~~~~~-~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~---~~~~~~~d~~~~-~~-~~~f 111 (263)
T 3pfg_A 39 DLAALVRRHSPKAA-SLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP---DAVLHHGDMRDF-SL-GRRF 111 (263)
T ss_dssp HHHHHHHHHCTTCC-EEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT---TSEEEECCTTTC-CC-SCCE
T ss_pred HHHHHHHhhCCCCC-cEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC---CCEEEECChHHC-Cc-cCCc
Confidence 34555555555555 999999999999999999876 99999999999999999874 789999999997 34 7899
Q ss_pred eEEEeCc-chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 115 DSVVDKG-TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 115 D~v~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|+|++.. +++++ .+..+...+++++.++|+|||.+++..+..
T Consensus 112 D~v~~~~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 112 SAVTCMFSSIGHL----AGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp EEEEECTTGGGGS----CHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CEEEEcCchhhhc----CCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 9999997 88887 122577899999999999999999975433
No 38
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=1.1e-17 Score=125.16 Aligned_cols=105 Identities=13% Similarity=0.286 Sum_probs=88.9
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-------CCceEEEeccccccccCCCCeeEEE
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-------PQLKYIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~fD~v~ 118 (207)
++.+|||+|||+|.++..+++.+. .+++++|+++.+++.+++++... .++.++++|+... +...++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~ 107 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-DKRFSGYDAAT 107 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-CGGGTTCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-ccccCCCCEEE
Confidence 345999999999999999999764 59999999999999999987532 2799999999766 45678999999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+..+++++ +..+...+++++.++|+|||.++...
T Consensus 108 ~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 108 VIEVIEHL-----DENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EESCGGGC-----CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EHHHHHhC-----CHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99999998 44466899999999999999666544
No 39
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=5.7e-18 Score=130.08 Aligned_cols=113 Identities=17% Similarity=0.300 Sum_probs=94.1
Q ss_pred HHHHHHhhC-CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCe
Q 028547 36 LAPLIKLYV-PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 36 ~~~~l~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~f 114 (207)
+...+...+ ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++. ++.|++.|+.+. +++.++|
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~d~~~~-~~~~~~f 95 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP----QVEWFTGYAENL-ALPDKSV 95 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT----TEEEECCCTTSC-CSCTTCB
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc----CCEEEECchhhC-CCCCCCE
Confidence 344343333 33445999999999999999998765 9999999999988776654 899999999887 6788999
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCcc
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPI 162 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~ 162 (207)
|+|++..+++++ .+...++++++++|+ ||.+++.++....
T Consensus 96 D~v~~~~~l~~~-------~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 96 DGVISILAIHHF-------SHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp SEEEEESCGGGC-------SSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred eEEEEcchHhhc-------cCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 999999999998 889999999999999 9988888875443
No 40
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.75 E-value=2.8e-17 Score=122.44 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=95.4
Q ss_pred HHHHHHhhC-CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCe
Q 028547 36 LAPLIKLYV-PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 36 ~~~~l~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~f 114 (207)
+..++..+. .+++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++ ....++.++++|+.+. ++.++|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~--~~~~~~~~~~~d~~~~--~~~~~~ 108 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR--HGLDNVEFRQQDLFDW--TPDRQW 108 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG--GCCTTEEEEECCTTSC--CCSSCE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh--cCCCCeEEEecccccC--CCCCce
Confidence 334444433 22334999999999999999999866 99999999999999988 2235899999999887 577899
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|+|++..+++++ +......+++++.++|+|||.+++.++..+
T Consensus 109 D~v~~~~~l~~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 109 DAVFFAHWLAHV-----PDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp EEEEEESCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred eEEEEechhhcC-----CHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 999999999998 334469999999999999999999987654
No 41
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.75 E-value=1.4e-17 Score=123.80 Aligned_cols=110 Identities=23% Similarity=0.353 Sum_probs=94.2
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeE
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
..++..+..+. .+|||+|||+|.++..+ +..+++++|+++.+++.++++. .++.+++.|+.+. ++++++||+
T Consensus 27 ~~~l~~~~~~~-~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~-~~~~~~fD~ 98 (211)
T 2gs9_A 27 ERALKGLLPPG-ESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---PEATWVRAWGEAL-PFPGESFDV 98 (211)
T ss_dssp HHHHHTTCCCC-SEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---TTSEEECCCTTSC-CSCSSCEEE
T ss_pred HHHHHHhcCCC-CeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcccccC-CCCCCcEEE
Confidence 34555555544 49999999999999887 4448999999999999999987 5789999999887 577889999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|++..+++++ .+...+++++.++|+|||.+++.++...
T Consensus 99 v~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 99 VLLFTTLEFV-------EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEEESCTTTC-------SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEcChhhhc-------CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 9999999998 6889999999999999999999886554
No 42
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.75 E-value=2.2e-17 Score=128.31 Aligned_cols=104 Identities=18% Similarity=0.252 Sum_probs=91.3
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
.+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.... .++.+.+.|+.+.. . .++||+|++..++++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN-I-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC-C-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccccc-c-cCCccEEEEccchhh
Confidence 334999999999999999999977 9999999999999999987633 37999999999873 3 789999999999998
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+ +......+++++.++|+|||.+++...
T Consensus 197 ~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 197 L-----NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp S-----CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred C-----CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8 557788999999999999999887664
No 43
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=2.4e-17 Score=120.53 Aligned_cols=114 Identities=21% Similarity=0.398 Sum_probs=96.2
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeE
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
..++..++++.. +|||+|||+|.++..+++.+. +++++|+++.+++.++++. .++.+.+.|+.+. +++.++||+
T Consensus 37 ~~~l~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~---~~~~~~~~d~~~~-~~~~~~~D~ 110 (195)
T 3cgg_A 37 ARLIDAMAPRGA-KILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF---PEARWVVGDLSVD-QISETDFDL 110 (195)
T ss_dssp HHHHHHHSCTTC-EEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC---TTSEEEECCTTTS-CCCCCCEEE
T ss_pred HHHHHHhccCCC-eEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC---CCCcEEEcccccC-CCCCCceeE
Confidence 346666655555 999999999999999999866 9999999999999999987 3689999999987 466789999
Q ss_pred EEeC-cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 117 VVDK-GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 117 v~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|++. .+++++ +..+...+++++.++|+|||.+++......
T Consensus 111 i~~~~~~~~~~-----~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~ 151 (195)
T 3cgg_A 111 IVSAGNVMGFL-----AEDGREPALANIHRALGADGRAVIGFGAGR 151 (195)
T ss_dssp EEECCCCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred EEECCcHHhhc-----ChHHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence 9998 677766 456779999999999999999999876543
No 44
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.74 E-value=1.2e-17 Score=128.89 Aligned_cols=106 Identities=21% Similarity=0.336 Sum_probs=92.1
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
.++.+|||+|||+|.++..+++....+|+++|+++.+++.++++.... .++.+..+|+.+. ++++++||+|++..+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL-PFEDASFDAVWALES 138 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC-CCCCCCccEEEEech
Confidence 344599999999999999998853349999999999999999886532 4699999999987 677889999999999
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
++++ .+...+++++.++|+|||.+++.++.
T Consensus 139 l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 139 LHHM-------PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTTS-------SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhC-------CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 9998 77899999999999999999998754
No 45
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.74 E-value=2e-17 Score=120.52 Aligned_cols=121 Identities=10% Similarity=0.092 Sum_probs=88.3
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCee
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD 115 (207)
.++...+.+.. +|||+|||+|.++..+++.+. +|+++|+++.+++.++++... ..++.+++.+...+..+.+++||
T Consensus 14 ~~l~~~~~~~~-~vLDiGcG~G~~~~~la~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD 91 (185)
T 3mti_A 14 DFLAEVLDDES-IVVDATMGNGNDTAFLAGLSK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIR 91 (185)
T ss_dssp HHHHTTCCTTC-EEEESCCTTSHHHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEE
T ss_pred HHHHHhCCCCC-EEEEEcCCCCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcC
Confidence 34444444444 999999999999999999844 999999999999999998762 25789999887776435578899
Q ss_pred EEEeCc-chhhhc-cCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 116 SVVDKG-TLDSLL-CGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 116 ~v~~~~-~l~~~~-~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+|+++. .+..-. ...........+++++.++|+|||.+++..+..
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 999762 222100 000123566788999999999999999988754
No 46
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=2.2e-17 Score=123.80 Aligned_cols=117 Identities=31% Similarity=0.495 Sum_probs=95.8
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCe
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~f 114 (207)
+...+...+++. .+|||+|||+|.++..+++.+. +++++|+++.+++.++++.... .++.++++|+.+. +++.++|
T Consensus 28 ~~~~l~~~~~~~-~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~~ 104 (227)
T 1ve3_A 28 LEPLLMKYMKKR-GKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL-SFEDKTF 104 (227)
T ss_dssp HHHHHHHSCCSC-CEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC-CSCTTCE
T ss_pred HHHHHHHhcCCC-CeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC-CCCCCcE
Confidence 344444445554 4999999999999999999877 9999999999999999886532 6799999999987 4677899
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|+|++..+++.. ...+...+++++.++|+|||.+++.....
T Consensus 105 D~v~~~~~~~~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 105 DYVIFIDSIVHF-----EPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp EEEEEESCGGGC-----CHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred EEEEEcCchHhC-----CHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 999999884332 22788999999999999999999987653
No 47
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.74 E-value=7.6e-18 Score=128.71 Aligned_cols=113 Identities=16% Similarity=0.115 Sum_probs=93.6
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCC
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~ 113 (207)
..++......++.+|||+|||+|.++..+++....+++++|+++.+++.++++.... .++.+.++|+.+. ++ +++
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~-~~~ 103 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VA-NEK 103 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CC-SSC
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC-Cc-CCC
Confidence 344444433444599999999999999998863339999999999999999887532 4799999999987 44 789
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
||+|++..+++++ .+...+++++.++|+|||.+++.+.
T Consensus 104 fD~V~~~~~~~~~-------~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 104 CDVAACVGATWIA-------GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp EEEEEEESCGGGT-------SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CCEEEECCChHhc-------CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 9999999999987 6789999999999999999999763
No 48
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.74 E-value=2.4e-17 Score=126.32 Aligned_cols=100 Identities=19% Similarity=0.334 Sum_probs=90.0
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++.. ..++.+.++|+.+. ++++++||+|++..+++++
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI-PLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC-CSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC-CCCCCCeeEEEECCchhhc
Confidence 34999999999999999998865 999999999999999998732 26899999999887 5778899999999999998
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
.+...+++++.++|+|||.+++.
T Consensus 118 -------~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 118 -------PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCHHHHHHHHHHHCCCCcEEEEE
Confidence 68899999999999999999987
No 49
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.74 E-value=1.1e-17 Score=129.21 Aligned_cols=116 Identities=22% Similarity=0.356 Sum_probs=97.0
Q ss_pred CHHHHHHhhCC-CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccC
Q 028547 35 SLAPLIKLYVP-SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 35 ~~~~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~ 110 (207)
.+...+..... .++.+|||+|||+|.++..+++.+. .+++++|+++.+++.+++++.. .+++.+.+.|+.+. +++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-~~~ 102 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL-PFE 102 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC-CSC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC-CCC
Confidence 44555544332 3335999999999999999999853 5999999999999999998653 25799999999987 577
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.++||+|++..+++++ .+...+++++.++|+|||.+++.+.
T Consensus 103 ~~~fD~v~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHL-------QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp TTCEEEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEEechhhhc-------CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 8999999999999998 7788999999999999999999763
No 50
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.74 E-value=6.4e-17 Score=118.32 Aligned_cols=109 Identities=11% Similarity=0.065 Sum_probs=90.8
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccc-cCCCCeeEEEeCcc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDE-FQTGSFDSVVDKGT 122 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~~~fD~v~~~~~ 122 (207)
.++.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++... .+++++++|+.+..+ ++.++||+|+++.+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 344599999999999999888887668999999999999999987532 579999999998632 34689999999988
Q ss_pred hhhhccCCCChhhHHHHHHHHHH--hcCCCcEEEEEEeCC
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWR--VLKDKGVYILVTYGA 160 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~--~L~pgG~~~~~~~~~ 160 (207)
+++. ..+...+++.+.+ +|+|||.+++.....
T Consensus 123 ~~~~------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVD------SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSC------HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcc------hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 7652 3678899999999 999999999987543
No 51
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.74 E-value=8.7e-18 Score=127.27 Aligned_cols=120 Identities=14% Similarity=0.146 Sum_probs=90.8
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccc-cccCCCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQM-DEFQTGS 113 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~-~~~~~~~ 113 (207)
+.+.+......++.+|||||||+|..+..+++....+++++|+++.+++.++++.... .+++++.+|+.+. .++++++
T Consensus 49 ~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 128 (236)
T 3orh_A 49 YMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTC
T ss_pred HHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccC
Confidence 3344444444555599999999999999999876669999999999999999987643 5688888888764 3467889
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
||.|+...+.... ......+...++++++++|||||+|++..
T Consensus 129 FD~i~~D~~~~~~--~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 129 FDGILYDTYPLSE--ETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEEEEECCCCCBG--GGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CceEEEeeeeccc--chhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 9999854322111 00122788999999999999999998754
No 52
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=3.1e-17 Score=125.44 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=94.0
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCee
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD 115 (207)
..++..+...++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++. +++.+.+.|+.+. + +.++||
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~~-~-~~~~fD 97 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---PNTNFGKADLATW-K-PAQKAD 97 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---TTSEEEECCTTTC-C-CSSCEE
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---CCcEEEECChhhc-C-ccCCcC
Confidence 344444433444599999999999999998872 239999999999999999883 5789999999987 4 678999
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+|++..+++++ .+...++++++++|+|||.+++.+..
T Consensus 98 ~v~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 98 LLYANAVFQWV-------PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp EEEEESCGGGS-------TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred EEEEeCchhhC-------CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 99999999998 78999999999999999999998754
No 53
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.73 E-value=6.5e-18 Score=131.66 Aligned_cols=111 Identities=19% Similarity=0.286 Sum_probs=91.2
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccc---cCCCCeeEE
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDE---FQTGSFDSV 117 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~---~~~~~fD~v 117 (207)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... ..++.+..+|+.++ + ++.++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL-DKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGH-HHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhC-ccccccCCCeEEE
Confidence 335999999999999999999987 999999999999999886521 14678899998886 4 567899999
Q ss_pred EeC-cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 118 VDK-GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 118 ~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
++. .+++|+.....+.+....++++++++|+|||.+++.+..
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 998 899988211112355999999999999999999998743
No 54
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.73 E-value=3.2e-17 Score=125.38 Aligned_cols=111 Identities=14% Similarity=0.231 Sum_probs=87.4
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc----cCCC
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE----FQTG 112 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~ 112 (207)
..++......++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.... ++..++.+... ...+
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKELAG 109 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGGTT
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc----cceeeeeecccccccccCC
Confidence 3444444334445999999999999999999977 9999999999999999998653 33444444321 1257
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+||+|+++.+++++ ..++...+++++.++| |||.+++...
T Consensus 110 ~fD~Vv~~~~l~~~-----~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 110 HFDFVLNDRLINRF-----TTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCSEEEEESCGGGS-----CHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CccEEEEhhhhHhC-----CHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 89999999999987 5577889999999999 9999998763
No 55
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.73 E-value=2.3e-17 Score=126.13 Aligned_cols=101 Identities=18% Similarity=0.262 Sum_probs=89.3
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
.+|||+|||+|.++..+++.+..+|+++|+++.+++.++++.... .++.++++|+.++ +++.++||+|++..++++
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-PFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-SSCTTCEEEEEEESCSCC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-CCCCCCEEEEEecChHhh
Confidence 499999999999999999986569999999999999999886532 3599999999887 577899999999999987
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+ +...+++++.++|+|||.+++.+.
T Consensus 127 ~--------~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 127 I--------GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp C--------CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred c--------CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 5 468899999999999999999874
No 56
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.73 E-value=6.5e-17 Score=126.67 Aligned_cols=117 Identities=14% Similarity=0.218 Sum_probs=94.9
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCe
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~f 114 (207)
++..+..+++.+|||+|||+|.++..+++. + .+|+++|+|+.+++.++++.... .++.+..+|+.++ +++|
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~f 138 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DEPV 138 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CCCC
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CCCc
Confidence 344443344459999999999999999988 6 49999999999999999987632 3789999999775 5789
Q ss_pred eEEEeCcchhhhccCCC---ChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 115 DSVVDKGTLDSLLCGSN---SRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~---~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|+|++..+++++. .+. +..+...+++++.++|+|||.+++.++..+
T Consensus 139 D~v~~~~~~~~~~-d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 139 DRIVSLGAFEHFA-DGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp SEEEEESCGGGTT-CCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred cEEEEcchHHhcC-ccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 9999999999871 111 336778999999999999999999886544
No 57
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.73 E-value=3.1e-17 Score=121.58 Aligned_cols=106 Identities=23% Similarity=0.354 Sum_probs=90.3
Q ss_pred CcEEEEcCCCchhh-HHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGNSAFS-EGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~G~~~-~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
.+|||+|||+|.++ ..++..+. +++++|+++.+++.++++... ..++.+.+.|+.+. +++.++||+|++..+++++
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~ 102 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL-PFKDESMSFVYSYGTIFHM 102 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC-CSCTTCEEEEEECSCGGGS
T ss_pred CEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC-CCCCCceeEEEEcChHHhC
Confidence 49999999999984 45555555 999999999999999987652 25789999999987 5778899999999999887
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+..+...++++++++|+|||.+++.++..+
T Consensus 103 -----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 103 -----RKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp -----CHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred -----CHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 567899999999999999999999887554
No 58
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.73 E-value=8.8e-18 Score=120.72 Aligned_cols=100 Identities=19% Similarity=0.363 Sum_probs=88.7
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++ .+++.+...| . +++.++||+|++..+++++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---~~~v~~~~~d---~-~~~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK---FDSVITLSDP---K-EIPDNSVDFILFANSFHDM 88 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH---CTTSEEESSG---G-GSCTTCEEEEEEESCSTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh---CCCcEEEeCC---C-CCCCCceEEEEEccchhcc
Confidence 334999999999999999999876 999999999999999998 3578999998 3 5677899999999999988
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
.+...+++++.++|+|||.+++.++...
T Consensus 89 -------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 89 -------DDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred -------cCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 7889999999999999999999886543
No 59
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.72 E-value=5.6e-17 Score=126.40 Aligned_cols=113 Identities=17% Similarity=0.239 Sum_probs=94.0
Q ss_pred hCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEecccccccc-CCCCeeEEE
Q 028547 43 YVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEF-QTGSFDSVV 118 (207)
Q Consensus 43 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~-~~~~fD~v~ 118 (207)
.+.+.. +|||+|||+|.++..+++.+..+++++|+++.+++.++++.... .++.++++|+.+. ++ +.++||+|+
T Consensus 61 ~~~~~~-~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~fD~v~ 138 (298)
T 1ri5_A 61 YTKRGD-SVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-HMDLGKEFDVIS 138 (298)
T ss_dssp HCCTTC-EEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-CCCCSSCEEEEE
T ss_pred hCCCCC-eEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc-ccCCCCCcCEEE
Confidence 344444 99999999999999998887669999999999999999987643 3589999999987 45 578999999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+..++++.. ....+...+++++.++|+|||.+++.+...
T Consensus 139 ~~~~l~~~~---~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 139 SQFSFHYAF---STSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EESCGGGGG---SSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ECchhhhhc---CCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999887621 133788999999999999999999988654
No 60
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.72 E-value=3e-17 Score=125.96 Aligned_cols=113 Identities=24% Similarity=0.404 Sum_probs=93.2
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCe
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~f 114 (207)
.+..++...+++. .+|||+|||+|.++..+++.+. +++++|+++.+++.++++... .+.+.|+.+. +++.++|
T Consensus 43 ~~~~~l~~~~~~~-~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~----~~~~~d~~~~-~~~~~~f 115 (260)
T 2avn_A 43 LIGSFLEEYLKNP-CRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK----NVVEAKAEDL-PFPSGAF 115 (260)
T ss_dssp HHHHHHHHHCCSC-CEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS----CEEECCTTSC-CSCTTCE
T ss_pred HHHHHHHHhcCCC-CeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC----CEEECcHHHC-CCCCCCE
Confidence 3456666666644 4999999999999999999876 999999999999999998652 2888999887 5778899
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|+|++..++.++ . .+...+++++.++|+|||.+++.+...
T Consensus 116 D~v~~~~~~~~~-----~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 116 EAVLALGDVLSY-----V-ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EEEEECSSHHHH-----C-SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEEEEcchhhhc-----c-ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 999998766554 1 348999999999999999999987553
No 61
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.72 E-value=4.5e-17 Score=128.20 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=90.5
Q ss_pred CCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 47 HHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
++.+|||+|||+|.++..+++. +. +|+++|+++.+++.++++.... .++.++++|+.+. +++.++||+|++..+
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-PFDKGAVTASWNNES 194 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CCCTTCEEEEEEESC
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-CCCCCCEeEEEECCc
Confidence 3459999999999999999987 55 9999999999999999986632 4799999999987 577899999999999
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++++ . ...+++++.++|+|||.+++.+.
T Consensus 195 l~~~-------~-~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 195 TMYV-------D-LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp GGGS-------C-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhC-------C-HHHHHHHHHHHcCCCcEEEEEEc
Confidence 9987 2 89999999999999999999874
No 62
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.72 E-value=1.2e-16 Score=124.26 Aligned_cols=105 Identities=20% Similarity=0.283 Sum_probs=89.8
Q ss_pred CCCCcEEEEcCCCchhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
+++.+|||+|||+|.++..+++ .+. +|+|+|+++.+++.+++++... .++.+...|+.++ + ++||+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~-~~fD~v~~~~ 137 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF---D-EPVDRIVSIG 137 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC---C-CCCSEEEEES
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC---C-CCeeEEEEeC
Confidence 3445999999999999999984 455 9999999999999999987632 4789999999765 3 7899999999
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+++++ +..+...+++++.++|+|||.+++.++..
T Consensus 138 ~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 138 AFEHF-----GHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp CGGGT-----CTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred chhhc-----ChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 99998 44678999999999999999999987543
No 63
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.72 E-value=1.7e-17 Score=129.27 Aligned_cols=107 Identities=16% Similarity=0.231 Sum_probs=81.4
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCC--------------------------------C
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRP--------------------------------Q 95 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~--------------------------------~ 95 (207)
+.+|||+|||+|.+...++.....+|+|+|+|+.+++.+++++.... .
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 151 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV 151 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE
T ss_pred CCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh
Confidence 34999999999996655554333499999999999999988654210 1
Q ss_pred ceEEEeccccccc-----cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 96 LKYIKMDVRQMDE-----FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 96 ~~~~~~d~~~~~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+.++.+|+.+..+ ++.++||+|+++.+++++. ....+...++++++++|||||.|++..
T Consensus 152 ~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~---~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 152 KRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVS---PDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHC---SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ceEEecccCCCCCccccccCCCCCCEEEehhhhhhhc---CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3566778887323 3456799999999999840 012689999999999999999999975
No 64
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.72 E-value=1.3e-16 Score=116.53 Aligned_cols=115 Identities=16% Similarity=0.288 Sum_probs=93.3
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCC--ceEEEeccccccccCCCC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQ--LKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~--~~~~~~d~~~~~~~~~~~ 113 (207)
.+++....+++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++.. ..+ +.+.+.|+.+. .+.++
T Consensus 43 ~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~ 119 (194)
T 1dus_A 43 ILVENVVVDKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--VKDRK 119 (194)
T ss_dssp HHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--CTTSC
T ss_pred HHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc--cccCC
Confidence 34444433444599999999999999999884 4999999999999999998753 244 89999999885 34678
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
||+|+++.++++ .......+++++.++|+|||.+++.+....
T Consensus 120 ~D~v~~~~~~~~------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 120 YNKIITNPPIRA------GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp EEEEEECCCSTT------CHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred ceEEEECCCccc------chhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 999999887775 236788999999999999999999887654
No 65
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.71 E-value=3.9e-17 Score=127.43 Aligned_cols=109 Identities=17% Similarity=0.244 Sum_probs=87.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC---------------------------------
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR--------------------------------- 93 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~--------------------------------- 93 (207)
+++|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++...
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 3499999999999999999873 359999999999999999875421
Q ss_pred ---------------------------CCceEEEecccccc----ccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHH
Q 028547 94 ---------------------------PQLKYIKMDVRQMD----EFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKE 142 (207)
Q Consensus 94 ---------------------------~~~~~~~~d~~~~~----~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~ 142 (207)
.++.|.++|+.... ++..++||+|++..+++|+. ...+......++++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ih-l~~~~~~~~~~l~~ 205 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVH-LNWGDEGLKRMFRR 205 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHH-HHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhh-hcCCHHHHHHHHHH
Confidence 37999999998642 24678999999999997760 00012388999999
Q ss_pred HHHhcCCCcEEEEEE
Q 028547 143 VWRVLKDKGVYILVT 157 (207)
Q Consensus 143 ~~~~L~pgG~~~~~~ 157 (207)
++++|+|||.|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999864
No 66
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.71 E-value=3.7e-17 Score=123.68 Aligned_cols=111 Identities=16% Similarity=0.196 Sum_probs=87.1
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccc-cccCCCCeeEEEe-Cc
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQM-DEFQTGSFDSVVD-KG 121 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~-~~~~~~~fD~v~~-~~ 121 (207)
..++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++.... .++.++++|+.+. .++++++||+|++ ..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 3344499999999999999998866569999999999999999987643 5789999999886 2467789999998 33
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.+ .. ..........++++++++|||||.+++..+
T Consensus 138 ~~-~~--~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PL-SE--ETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CC-BG--GGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cc-ch--hhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 32 11 001235667889999999999999998764
No 67
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.71 E-value=1.1e-16 Score=121.32 Aligned_cols=105 Identities=17% Similarity=0.290 Sum_probs=90.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCeeEEEeCc-chhh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFDSVVDKG-TLDS 125 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~-~l~~ 125 (207)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.... .++.+.+.|+.+. +++ ++||+|++.. ++++
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~-~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL-NIN-RKFDLITCCLDSTNY 114 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC-CCS-CCEEEEEECTTGGGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC-Ccc-CCceEEEEcCccccc
Confidence 34999999999999999999876 8999999999999999987633 3789999999987 445 8899999998 8888
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+ .+..+...+++++.++|+|||.+++....
T Consensus 115 ~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 115 I----IDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp C----CSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred c----CCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6 23368899999999999999999986643
No 68
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.71 E-value=2e-16 Score=124.65 Aligned_cols=106 Identities=11% Similarity=0.202 Sum_probs=91.6
Q ss_pred CCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
.++.+|||+|||+|.++..+++. +. +|+++|+++.+++.++++.... .++.+...|+.+. + ++||+|++..
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~---~~fD~v~~~~ 163 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-A---EPVDRIVSIE 163 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-C---CCCSEEEEES
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-C---CCcCEEEEeC
Confidence 34459999999999999999987 66 9999999999999999987642 4689999998776 2 7899999999
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+++++ +..+...+++++.++|+|||.+++.++...
T Consensus 164 ~l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 164 AFEHF-----GHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp CGGGT-----CGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred hHHhc-----CHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 99988 557889999999999999999999886544
No 69
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.71 E-value=4.6e-17 Score=127.50 Aligned_cols=109 Identities=16% Similarity=0.241 Sum_probs=83.7
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCC--------CceEEEeccc------cc-cccCCC
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRP--------QLKYIKMDVR------QM-DEFQTG 112 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~--------~~~~~~~d~~------~~-~~~~~~ 112 (207)
+.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++..... ++.|.+.|+. ++ .+++.+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 34999999999987776666654599999999999999999865321 2567788773 22 124567
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+||+|+|..++|++ +.. .+...++++++++|||||.|++.+...
T Consensus 129 ~FD~V~~~~~lhy~-~~~---~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 129 KFNIIDWQFAIHYS-FHP---RHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp CEEEEEEESCGGGT-CST---TTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CeeEEEECchHHHh-CCH---HHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 99999999888865 111 245799999999999999999988643
No 70
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.71 E-value=8.1e-17 Score=125.11 Aligned_cols=103 Identities=14% Similarity=0.200 Sum_probs=90.5
Q ss_pred CCcEEEEcCCCchhhHHHHhcCC--CcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGY--EDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
+.+|||+|||+|.++..+++... .+|+++|+++.+++.+++++... .++.+.+.|+.+. ++ .++||+|++..+++
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~-~~-~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-EL-NDKYDIAICHAFLL 100 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CC-SSCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc-Cc-CCCeeEEEECChhh
Confidence 35999999999999999998732 49999999999999999987644 4899999999987 45 46999999999999
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
++ .+...++++++++|+|||.+++....
T Consensus 101 ~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 101 HM-------TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GC-------SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cC-------CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 98 78899999999999999999988754
No 71
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=2.5e-16 Score=119.99 Aligned_cols=114 Identities=22% Similarity=0.403 Sum_probs=90.6
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCee
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD 115 (207)
..++.....+++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.... .++.++++|+.+. +. .++||
T Consensus 31 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~-~~~fD 107 (252)
T 1wzn_A 31 EEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-AF-KNEFD 107 (252)
T ss_dssp HHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-CC-CSCEE
T ss_pred HHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhc-cc-CCCcc
Confidence 3444444334445999999999999999999877 9999999999999999887532 4789999999987 33 36899
Q ss_pred EEEeC-cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 116 SVVDK-GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 116 ~v~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+|++. ..++++ +..+...+++++.++|+|||.+++...
T Consensus 108 ~v~~~~~~~~~~-----~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 108 AVTMFFSTIMYF-----DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEECSSGGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcCCchhcC-----CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 99986 334443 346789999999999999999987653
No 72
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.70 E-value=5.4e-16 Score=114.65 Aligned_cols=110 Identities=12% Similarity=0.090 Sum_probs=88.1
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCee
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD 115 (207)
++..+..+++.+|||+|||+|.++..+++.+. .+++++|+++.+++.++++... ..++.+++.|+.+..+ ...+||
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D 110 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPD 110 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCS
T ss_pred HHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCC
Confidence 34444344445999999999999999999863 5999999999999999988652 2579999999977532 336799
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+|++...++ +...+++++.++|+|||.+++....
T Consensus 111 ~i~~~~~~~----------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 111 RVFIGGSGG----------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp EEEESCCTT----------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred EEEECCCCc----------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999876544 4578999999999999999998654
No 73
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=7.2e-17 Score=121.46 Aligned_cols=120 Identities=13% Similarity=0.167 Sum_probs=91.3
Q ss_pred HhhCCCCCCcEEEEcCC-CchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCeeEEE
Q 028547 41 KLYVPSHHQRILIVGCG-NSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 41 ~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~v~ 118 (207)
...+.+. .+|||+||| +|.++..+++....+|+++|+++.+++.+++++... .++.++++|+....+++.++||+|+
T Consensus 50 ~~~~~~~-~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 50 KTFLRGG-EVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp HTTCCSS-CEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred HhhcCCC-CEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEE
Confidence 3334444 499999999 999999999883239999999999999999987632 3799999998665455678999999
Q ss_pred eCcchhhhcc------------CCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 119 DKGTLDSLLC------------GSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 119 ~~~~l~~~~~------------~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
++.++++... +.........+++++.++|+|||.+++......
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 9977754311 111223458899999999999999999775543
No 74
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.69 E-value=2.3e-16 Score=117.12 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=98.6
Q ss_pred CCCCChhchhhhhcccCCcee---eecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHH
Q 028547 8 QAYGEPWYWDNRYAHESGPFD---WYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIE 84 (207)
Q Consensus 8 ~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~ 84 (207)
..|....++...|......+. +.........++..+..+++.+|||+|||+|.++..+++.+. +|+++|+++.+++
T Consensus 35 ~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~ 113 (210)
T 3lbf_A 35 EKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQW 113 (210)
T ss_dssp GGGSCGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHH
T ss_pred HHcCCcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHH
Confidence 345555566666654321111 111111233344444344445999999999999999999854 9999999999999
Q ss_pred HHHHHccC--CCCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 85 AMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 85 ~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
.+++++.. ..++.+..+|+.+.. ...++||+|++...++++ . +.+.+.|+|||.+++....
T Consensus 114 ~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~~~~~~-------~------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 114 QARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTAAPPEI-------P------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp HHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESSBCSSC-------C------THHHHTEEEEEEEEEEECS
T ss_pred HHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEccchhhh-------h------HHHHHhcccCcEEEEEEcC
Confidence 99998763 257999999998863 356799999999888877 2 2578999999999998754
No 75
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.69 E-value=6.4e-16 Score=116.33 Aligned_cols=140 Identities=21% Similarity=0.130 Sum_probs=101.5
Q ss_pred CCCCCChhchhhhhc--ccCCceeeec--CccC-HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHH
Q 028547 7 TQAYGEPWYWDNRYA--HESGPFDWYQ--KYPS-LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSV 81 (207)
Q Consensus 7 ~~~~~~~~~w~~~~~--~~~~~~~~~~--~~~~-~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~ 81 (207)
...|....+|...|. .....+.... .... +..++......++.+|||+|||+|.++..+++.+ .+++++|+++.
T Consensus 25 r~~f~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~ 103 (231)
T 1vbf_A 25 RSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEK 103 (231)
T ss_dssp HHHHSCGGGGGGSSSSTTCCEEEETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHH
T ss_pred HHHcCCcchhhhccccCCCceeeCCCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHH
Confidence 334556677777776 4322222111 1112 2334444433444599999999999999999987 49999999999
Q ss_pred HHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 82 VIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 82 ~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+++.++++.....++.++++|+.+.. ...++||+|++..+++++ . +++.++|+|||.+++......
T Consensus 104 ~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~-------~------~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 104 MYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATAPTL-------L------CKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp HHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBBSSC-------C------HHHHHTEEEEEEEEEEECSSS
T ss_pred HHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcHHHH-------H------HHHHHHcCCCcEEEEEEcCCC
Confidence 99999998875448999999998742 245789999999998876 1 468999999999999875444
No 76
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.69 E-value=2.4e-16 Score=119.00 Aligned_cols=135 Identities=18% Similarity=0.280 Sum_probs=101.8
Q ss_pred hhchhhhhcccCCceeeecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC
Q 028547 13 PWYWDNRYAHESGPFDWYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 13 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~ 92 (207)
..+|+..+..... .|......+...+.....+.. +|||+|||+|.++..+++.+. +++++|+++.+++.++++.
T Consensus 9 a~~yd~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~-- 82 (239)
T 3bxo_A 9 ADVYDLFYLGRGK--DYAAEASDIADLVRSRTPEAS-SLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL-- 82 (239)
T ss_dssp HHHHHHHHHHHTC--CHHHHHHHHHHHHHHHCTTCC-EEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC--
T ss_pred HHHHHHHhhccHh--hHHHHHHHHHHHHHHhcCCCC-eEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC--
Confidence 4566666543211 122222234555555554444 999999999999999999876 9999999999999999986
Q ss_pred CCCceEEEeccccccccCCCCeeEEEe-CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 93 RPQLKYIKMDVRQMDEFQTGSFDSVVD-KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 93 ~~~~~~~~~d~~~~~~~~~~~fD~v~~-~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+++.+.+.|+.+. +. .++||+|++ ..+++++ ....+...+++++.++|+|||.+++.++..
T Consensus 83 -~~~~~~~~d~~~~-~~-~~~~D~v~~~~~~~~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 83 -PDATLHQGDMRDF-RL-GRKFSAVVSMFSSVGYL----KTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp -TTCEEEECCTTTC-CC-SSCEEEEEECTTGGGGC----CSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred -CCCEEEECCHHHc-cc-CCCCcEEEEcCchHhhc----CCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 4689999999987 34 678999995 5577776 233678899999999999999999976544
No 77
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.69 E-value=9.1e-17 Score=120.24 Aligned_cols=110 Identities=17% Similarity=0.239 Sum_probs=89.9
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc---cccCCCCee
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM---DEFQTGSFD 115 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~fD 115 (207)
++..+....+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++ .++.+...|+.+. ......+||
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA----GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT----CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh----cccccchhhHHhhcccccccCCCcc
Confidence 34444334445999999999999999999876 999999999999999988 4678888888876 222345699
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+|++..+++ . .+...+++++.++|+|||.+++.++...
T Consensus 119 ~v~~~~~l~-~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 119 LICANFALL-H-------QDIIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp EEEEESCCC-S-------SCCHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEEECchhh-h-------hhHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 999998888 5 6778999999999999999999886443
No 78
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.69 E-value=1.1e-16 Score=129.44 Aligned_cols=104 Identities=21% Similarity=0.281 Sum_probs=90.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHcc----------CCCCceEEEecccccc-----ccC
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYS----------NRPQLKYIKMDVRQMD-----EFQ 110 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~----------~~~~~~~~~~d~~~~~-----~~~ 110 (207)
+.+|||+|||+|.++..+++.. ..+|+++|+++.+++.+++++. ...++.|+++|+.++. +++
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 3499999999999999998862 2499999999999999998753 1158999999998862 567
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.++||+|+++.+++++ .+...++++++++|+|||.+++.+.
T Consensus 164 ~~~fD~V~~~~~l~~~-------~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLS-------TNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp TTCEEEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEccchhcC-------CCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8899999999999998 7789999999999999999999764
No 79
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.68 E-value=1.7e-16 Score=124.48 Aligned_cols=115 Identities=12% Similarity=0.183 Sum_probs=91.3
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHH--hcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCC
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMV--DDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~--~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~ 113 (207)
.+...+.+.. +|||+|||+|.++..++ .....+|+++|+++.+++.+++++... .++.++++|+.+. +++ ++
T Consensus 111 ~l~~~l~~~~-~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~-~~ 187 (305)
T 3ocj_A 111 ALQRHLRPGC-VVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL-DTR-EG 187 (305)
T ss_dssp HHHHHCCTTC-EEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC-CCC-SC
T ss_pred HHHhhCCCCC-EEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC-Ccc-CC
Confidence 3333344444 99999999999999985 222349999999999999999988643 3489999999998 556 89
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
||+|+++.+++++ .+......+++++.++|+|||.+++.++..
T Consensus 188 fD~v~~~~~~~~~----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 188 YDLLTSNGLNIYE----PDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEECCSSGGGC----CCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred eEEEEECChhhhc----CCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 9999999999886 122344458999999999999999987544
No 80
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.68 E-value=6e-16 Score=117.10 Aligned_cols=115 Identities=22% Similarity=0.361 Sum_probs=93.7
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccCCCCe
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~f 114 (207)
+...+...+++.. +|||+|||+|.++..+++. . +++++|+++.+++.++++... ..++.+.+.|+.+. +.+ ++|
T Consensus 23 ~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~-~~f 97 (243)
T 3d2l_A 23 WVAWVLEQVEPGK-RIADIGCGTGTATLLLADH-Y-EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMREL-ELP-EPV 97 (243)
T ss_dssp HHHHHHHHSCTTC-EEEEESCTTCHHHHHHTTT-S-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGC-CCS-SCE
T ss_pred HHHHHHHHcCCCC-eEEEecCCCCHHHHHHhhC-C-eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhc-CCC-CCc
Confidence 3445555555555 9999999999999999888 4 999999999999999988653 25789999999887 344 789
Q ss_pred eEEEeCc-chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 115 DSVVDKG-TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 115 D~v~~~~-~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
|+|++.. +++++ .+..+...+++++.++|+|||.+++....
T Consensus 98 D~v~~~~~~~~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 98 DAITILCDSLNYL----QTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp EEEEECTTGGGGC----CSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CEEEEeCCchhhc----CCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 9999975 77775 23467889999999999999999986643
No 81
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.68 E-value=3.3e-16 Score=113.23 Aligned_cols=107 Identities=15% Similarity=0.182 Sum_probs=86.6
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
.+.+|||+|||+|.++..+++.+..+++++|+++.+++.+++++... .++.++++|+.+..+...++||+|+++.++
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 33499999999999999999886569999999999999999987643 368999999988533445679999998776
Q ss_pred hhhccCCCChhhHHHHHHHHH--HhcCCCcEEEEEEeCCc
Q 028547 124 DSLLCGSNSRQNATQMLKEVW--RVLKDKGVYILVTYGAP 161 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~--~~L~pgG~~~~~~~~~~ 161 (207)
+. ......++.+. ++|+|||.+++......
T Consensus 111 ~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 111 AK--------ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HH--------HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred Cc--------chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 42 45567777776 99999999999875443
No 82
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.68 E-value=2.1e-16 Score=116.92 Aligned_cols=111 Identities=17% Similarity=0.150 Sum_probs=90.1
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~ 113 (207)
+...+.....+.. +|||+|||+|.++..+++.+..+++++|+++.+++.+++++... .++.+.+.|+.+. ..++
T Consensus 50 ~~~~l~~~~~~~~-~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~~~ 125 (205)
T 3grz_A 50 AMLGIERAMVKPL-TVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD---VDGK 125 (205)
T ss_dssp HHHHHHHHCSSCC-EEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT---CCSC
T ss_pred HHHHHHHhccCCC-EEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc---CCCC
Confidence 3444444444444 99999999999999999886669999999999999999987632 3599999999875 3578
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
||+|+++.+++++ ..+++++.++|+|||.+++..+..
T Consensus 126 fD~i~~~~~~~~~----------~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 126 FDLIVANILAEIL----------LDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp EEEEEEESCHHHH----------HHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred ceEEEECCcHHHH----------HHHHHHHHHhcCCCCEEEEEecCc
Confidence 9999998776654 788999999999999999976543
No 83
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=1.3e-16 Score=120.01 Aligned_cols=99 Identities=11% Similarity=0.178 Sum_probs=81.9
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC-CCCeeE
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ-TGSFDS 116 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~fD~ 116 (207)
.++.....+.. +|||+|||+|.++..+++.+. +|+++|+++.+++.++++. +++.++++|+.+..+++ .++||+
T Consensus 40 ~~~~~~~~~~~-~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 40 LWLSRLLTPQT-RVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA---PHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp HHHHHHCCTTC-EEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC---TTSEEEECCSCSSCCTTCCCCEEE
T ss_pred HHHHhcCCCCC-eEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC---CCceEEEcchhhccCCcCCCCEEE
Confidence 33444444444 999999999999999999866 9999999999999999983 57999999996554666 789999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYI 154 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~ 154 (207)
|+++. +...+++++.++|+|||.++
T Consensus 115 v~~~~-------------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 115 IVSRR-------------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEES-------------CCSGGGGGHHHHEEEEEEEE
T ss_pred EEeCC-------------CHHHHHHHHHHHcCCCcEEE
Confidence 99862 34566889999999999998
No 84
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.67 E-value=7.7e-16 Score=114.73 Aligned_cols=110 Identities=21% Similarity=0.291 Sum_probs=84.3
Q ss_pred CCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccc-cCCCCeeEEEeCcch
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDE-FQTGSFDSVVDKGTL 123 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~-~~~~~fD~v~~~~~l 123 (207)
..+|||+|||+|.++..+++... .+++|+|+++.+++.++++... ..++.++++|+.++.. ++.++||+|+++.+.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~ 121 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD 121 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC
Confidence 34999999999999999998753 4999999999999999988652 2589999999998621 567889999987543
Q ss_pred hhhcc-CCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLC-GSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~-~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.+... +.........+++++.++|+|||.+++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 122 PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 32200 00000124689999999999999999876
No 85
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.66 E-value=4.9e-16 Score=117.54 Aligned_cols=109 Identities=13% Similarity=0.105 Sum_probs=80.6
Q ss_pred cEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHcc--------CCCCceEEEeccccccc--cCCCCeeEEE
Q 028547 50 RILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYS--------NRPQLKYIKMDVRQMDE--FQTGSFDSVV 118 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~--------~~~~~~~~~~d~~~~~~--~~~~~fD~v~ 118 (207)
+|||||||+|.++..+++... ..++|+|+++.+++.+++++. ...|+.++++|+.+..+ ++.++||.|+
T Consensus 49 ~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~ 128 (235)
T 3ckk_A 49 EFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMF 128 (235)
T ss_dssp EEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEE
T ss_pred eEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEE
Confidence 999999999999999998753 489999999999999987642 23689999999987324 5688999998
Q ss_pred eCcchhhhcc-CCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLC-GSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~-~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+...-.+... +.........+++++.++|+|||.|++.+.
T Consensus 129 ~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 129 FLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 6533222100 000000125799999999999999999873
No 86
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.66 E-value=1.8e-15 Score=116.88 Aligned_cols=107 Identities=18% Similarity=0.172 Sum_probs=89.0
Q ss_pred CcEEEEcCCC---chhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc----------ccCCCCe
Q 028547 49 QRILIVGCGN---SAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD----------EFQTGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~---G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~----------~~~~~~f 114 (207)
.+|||||||+ |.++..+.+... .+|+++|+|+.+++.+++++....++.++++|+.+.. .++..+|
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~ 158 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRP 158 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSC
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCC
Confidence 4999999999 988776665432 4999999999999999998865568999999997641 1233589
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|+|++..++|++ +..+...++++++++|+|||.|++.++..
T Consensus 159 d~v~~~~vlh~~-----~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 159 AAIMLVGMLHYL-----SPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CEEEETTTGGGS-----CTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred EEEEEechhhhC-----CcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 999999999998 33358999999999999999999998765
No 87
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.66 E-value=4.7e-16 Score=114.31 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=90.5
Q ss_pred hhCCCCCCcEEEEcCCCchhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeE
Q 028547 42 LYVPSHHQRILIVGCGNSAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 42 ~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
..+.+.. +|||+|||+|.++..+++. + ..+++++|+++.+++.+++++... .++.++++|+.+...+..++||+
T Consensus 18 ~~~~~~~-~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 18 MFVKEGD-TVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HHCCTTC-EEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred hcCCCCC-EEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceE
Confidence 3344444 9999999999999999887 2 249999999999999999987642 57999999998874456689999
Q ss_pred EEeCcchhhhc--cCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 117 VVDKGTLDSLL--CGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 117 v~~~~~l~~~~--~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|+++.++.... .......+...+++++.++|+|||.+++..+..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 99886551100 001223466779999999999999999987643
No 88
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.66 E-value=2.2e-16 Score=118.17 Aligned_cols=112 Identities=17% Similarity=0.098 Sum_probs=84.5
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccc--cCCCCeeEEEeC
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDE--FQTGSFDSVVDK 120 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~--~~~~~fD~v~~~ 120 (207)
..+ +|||||||+|.++..+++... ..|+|+|+++.+++.++++... ..|++++++|+.+..+ +++++||.|+++
T Consensus 34 ~~~-~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAP-VTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCC-EEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCC-eEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 444 999999999999999998764 4899999999999999988653 3689999999988523 578899999986
Q ss_pred cchhhhccC-CCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 121 GTLDSLLCG-SNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 121 ~~l~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.+..+.... .........+++.++++|+|||.+++.+-
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 332221000 00000113599999999999999999873
No 89
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.66 E-value=5.7e-16 Score=114.53 Aligned_cols=103 Identities=8% Similarity=0.040 Sum_probs=84.5
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++... .++.++++|+.+..+...++||+|+++.+++ .
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~-~ 134 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR-R 134 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS-T
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC-C
Confidence 499999999999999988877669999999999999999987633 4799999999885444567899999987744 2
Q ss_pred ccCCCChhhHHHHHHHHHH--hcCCCcEEEEEEeC
Q 028547 127 LCGSNSRQNATQMLKEVWR--VLKDKGVYILVTYG 159 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~--~L~pgG~~~~~~~~ 159 (207)
.....+++.+.+ +|+|||.+++....
T Consensus 135 -------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 135 -------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp -------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred -------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 456677777765 59999999987743
No 90
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.66 E-value=1.7e-16 Score=117.29 Aligned_cols=105 Identities=15% Similarity=0.107 Sum_probs=85.5
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC----CCceEEEecccccccc-CCCC-eeEEEeCcc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR----PQLKYIKMDVRQMDEF-QTGS-FDSVVDKGT 122 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~----~~~~~~~~d~~~~~~~-~~~~-fD~v~~~~~ 122 (207)
.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++... .++.++++|+.+..+. ..++ ||+|+++.+
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP 134 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC
Confidence 499999999999999888877669999999999999999987532 4789999999886322 3578 999999877
Q ss_pred hhhhccCCCChhhHHHHHHHH--HHhcCCCcEEEEEEeCCc
Q 028547 123 LDSLLCGSNSRQNATQMLKEV--WRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~--~~~L~pgG~~~~~~~~~~ 161 (207)
++ . .....+++.+ .++|+|||.+++......
T Consensus 135 ~~-~-------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 135 FH-F-------NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SS-S-------CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CC-C-------ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 54 2 5667788888 668999999998875443
No 91
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.66 E-value=6.2e-16 Score=115.88 Aligned_cols=106 Identities=18% Similarity=0.311 Sum_probs=89.5
Q ss_pred hhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc-cccCCCCeeEEEeC
Q 028547 42 LYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM-DEFQTGSFDSVVDK 120 (207)
Q Consensus 42 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~fD~v~~~ 120 (207)
..+..++.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++. ..+.+.|+.+. .++++++||+|++.
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 27 KHIKKEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL-----DHVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp TTCCTTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS-----SEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred HHhccCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-----CcEEEcchhhcCCCCCCCccCEEEEC
Confidence 3333444599999999999999999886 59999999999999998764 37888998873 35667899999999
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.+++++ .+...+++++.++|+|||.+++.+...
T Consensus 101 ~~l~~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 101 DVLEHL-------FDPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp SCGGGS-------SCHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred Chhhhc-------CCHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999998 677899999999999999999987543
No 92
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.66 E-value=1.1e-15 Score=120.25 Aligned_cols=110 Identities=20% Similarity=0.244 Sum_probs=90.1
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC---------CCCceEEEecccccc---ccC--CCCe
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN---------RPQLKYIKMDVRQMD---EFQ--TGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~---------~~~~~~~~~d~~~~~---~~~--~~~f 114 (207)
.+|||+|||+|.++..+++.+..+++++|+++.+++.++++... ..++.++++|+.+.. +++ .++|
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~f 115 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCF 115 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCE
T ss_pred CEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCE
Confidence 49999999999999999886556999999999999999987642 236899999998862 243 4589
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|+|++..+++++. .+..+...+++++.++|+|||.+++.++...
T Consensus 116 D~V~~~~~l~~~~---~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 116 DICSCQFVCHYSF---ESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp EEEEEETCGGGGG---GSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred EEEEEecchhhcc---CCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 9999999998741 1235678999999999999999999887553
No 93
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.66 E-value=7.3e-17 Score=125.84 Aligned_cols=105 Identities=13% Similarity=0.108 Sum_probs=80.4
Q ss_pred CcEEEEcCCCchhhHHH----HhcCC-Cc--EEEEeCCHHHHHHHHHHccCC---CCceE--EEecccccc-----ccCC
Q 028547 49 QRILIVGCGNSAFSEGM----VDDGY-ED--VVNVDISSVVIEAMMKKYSNR---PQLKY--IKMDVRQMD-----EFQT 111 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l----~~~~~-~~--v~~~D~s~~~i~~~~~~~~~~---~~~~~--~~~d~~~~~-----~~~~ 111 (207)
.+|||||||+|.++..+ +.... .. ++++|+|+.|++.++++.... .++.+ ...++.++. ++++
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKEL 133 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCC
Confidence 49999999999765433 33222 23 399999999999999986532 35544 345554431 1457
Q ss_pred CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 112 GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++||+|++..+++|+ .++..++++++++|||||.+++...+.
T Consensus 134 ~~fD~V~~~~~l~~~-------~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 134 QKWDFIHMIQMLYYV-------KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp CCEEEEEEESCGGGC-------SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred CceeEEEEeeeeeec-------CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 899999999999999 899999999999999999999987554
No 94
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.66 E-value=1.1e-15 Score=113.78 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=77.3
Q ss_pred CCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc---cccCCCCeeEEEeCcc
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM---DEFQTGSFDSVVDKGT 122 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~fD~v~~~~~ 122 (207)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+.+......++.++.+|+.+. .++. ++||+|+++.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~- 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQDI- 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEECC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEec-
Confidence 33499999999999999998864 2489999999988766555443335788888888774 2333 7899999872
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.+ ......++++++++|||||.+++..
T Consensus 135 ~~--------~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 135 AQ--------KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CS--------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC--------hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 11 1445566999999999999999985
No 95
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.65 E-value=2.9e-15 Score=112.42 Aligned_cols=120 Identities=18% Similarity=0.247 Sum_probs=93.9
Q ss_pred eecCccCHHHHHHh----hCCCCCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEec
Q 028547 29 WYQKYPSLAPLIKL----YVPSHHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD 102 (207)
Q Consensus 29 ~~~~~~~~~~~l~~----~~~~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d 102 (207)
|....+.+...+.. +..+++.+|||+|||+|.++..+++. |. ..|+++|+++++++.++++.....|+..+..|
T Consensus 55 w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d 134 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGD 134 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESC
T ss_pred ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEe
Confidence 55544456555543 22345559999999999999999986 44 48999999999999999998877899999998
Q ss_pred ccccc--ccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 103 VRQMD--EFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 103 ~~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..... +...+++|+|++... +. .+...++.++.+.|||||.++++.
T Consensus 135 ~~~p~~~~~~~~~vDvVf~d~~--~~-------~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 135 ARFPEKYRHLVEGVDGLYADVA--QP-------EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp TTCGGGGTTTCCCEEEEEECCC--CT-------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCccccccccceEEEEEEecc--CC-------hhHHHHHHHHHHhccCCCEEEEEE
Confidence 87752 345678999987532 22 577889999999999999999865
No 96
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=1.5e-15 Score=113.55 Aligned_cols=103 Identities=22% Similarity=0.318 Sum_probs=88.5
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEE
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
..+....+ . .+|||+|||+|.++..+++. +++|+++.+++.++++ ++.+.+.|+.+. +++.++||+|
T Consensus 40 ~~l~~~~~-~-~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-----~~~~~~~d~~~~-~~~~~~fD~v 106 (219)
T 1vlm_A 40 QAVKCLLP-E-GRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-----GVFVLKGTAENL-PLKDESFDFA 106 (219)
T ss_dssp HHHHHHCC-S-SCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-----TCEEEECBTTBC-CSCTTCEEEE
T ss_pred HHHHHhCC-C-CcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-----CCEEEEcccccC-CCCCCCeeEE
Confidence 34555554 4 49999999999999888754 9999999999999887 688999999887 5677899999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++..+++++ .+...+++++.++|+|||.+++.+...
T Consensus 107 ~~~~~l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 107 LMVTTICFV-------DDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp EEESCGGGS-------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EEcchHhhc-------cCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 999999988 778999999999999999999987654
No 97
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.65 E-value=1.2e-15 Score=123.03 Aligned_cols=108 Identities=19% Similarity=0.255 Sum_probs=90.7
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++... .++++++.|+.+.. ...++||+|+++.++++.
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~-~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL-TEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS-CTTCCEEEEEECCCCCTT
T ss_pred CCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc-ccCCCeEEEEECCchhhc
Confidence 34999999999999999999876 9999999999999999987643 35899999999873 345899999999988862
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
..........+++++.++|+|||.++++...
T Consensus 312 --~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 312 --GAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp --CSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred --ccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 1112378889999999999999999998643
No 98
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.64 E-value=3.4e-15 Score=111.16 Aligned_cols=141 Identities=12% Similarity=0.063 Sum_probs=100.6
Q ss_pred CCCCCChhchhhhhcccCCceeeec---CccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-C-CcEEEEeCCHH
Q 028547 7 TQAYGEPWYWDNRYAHESGPFDWYQ---KYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-Y-EDVVNVDISSV 81 (207)
Q Consensus 7 ~~~~~~~~~w~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~~D~s~~ 81 (207)
...|....+|...|......+.... .......++......++.+|||+|||+|.++..+++.+ . .+|+++|+++.
T Consensus 34 r~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~ 113 (215)
T 2yxe_A 34 REEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPE 113 (215)
T ss_dssp GGGGSCGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHH
T ss_pred HHHcCCchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHH
Confidence 3456667777777775433332111 11122334444433444599999999999999999875 2 59999999999
Q ss_pred HHHHHHHHccC--CCCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 82 VIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 82 ~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+++.+++++.. ..++.+...|+.... ...++||+|++..+++++ . +++.++|+|||.+++....
T Consensus 114 ~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~-------~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 114 LAEKAERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRIYTTAAGPKI-------P------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp HHHHHHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEEEESSBBSSC-------C------HHHHHTEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEEEECCchHHH-------H------HHHHHHcCCCcEEEEEECC
Confidence 99999988652 256899999986542 235789999999998876 2 4789999999999998754
Q ss_pred Cc
Q 028547 160 AP 161 (207)
Q Consensus 160 ~~ 161 (207)
..
T Consensus 180 ~~ 181 (215)
T 2yxe_A 180 YL 181 (215)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 99
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.64 E-value=1.8e-16 Score=129.48 Aligned_cols=104 Identities=16% Similarity=0.196 Sum_probs=84.1
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++........|...+...+ ++++++||+|++..+++|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l-~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDV-RRTEGPANVIYAANTLCH 183 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHH-HHHHCCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhc-ccCCCCEEEEEECChHHh
Confidence 3345999999999999999999877 99999999999999988721111112223344444 456789999999999999
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+ .++..++++++++|+|||.+++.+.
T Consensus 184 ~-------~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 184 I-------PYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp C-------TTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-------CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9 7999999999999999999999764
No 100
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.64 E-value=4.9e-16 Score=113.05 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=96.9
Q ss_pred hhchhhhhcccCCceeeecCccCHHHHHHhhC-C-CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHc
Q 028547 13 PWYWDNRYAHESGPFDWYQKYPSLAPLIKLYV-P-SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKY 90 (207)
Q Consensus 13 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~ 90 (207)
..||...+...... ........+.+.+...+ . ..+.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++
T Consensus 9 g~~~~~~~~~~~~~-~~rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~ 87 (187)
T 2fhp_A 9 GEYGGRRLKALDGD-NTRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENI 87 (187)
T ss_dssp STTTTCBCCCCCCC-SSCCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred ccccCccccCCCCC-CcCcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH
Confidence 34555555544322 22222333443333332 2 233499999999999999988876569999999999999999887
Q ss_pred cCC---CCceEEEeccccccc---cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHH--HHhcCCCcEEEEEEeCCc
Q 028547 91 SNR---PQLKYIKMDVRQMDE---FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEV--WRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 91 ~~~---~~~~~~~~d~~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~--~~~L~pgG~~~~~~~~~~ 161 (207)
... .++.++++|+.+..+ ...++||+|+++.+++. ......++.+ .++|+|||.+++......
T Consensus 88 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 88 AITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAK--------QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGG--------CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCc--------hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 532 368999999988522 12678999999877552 3455666666 888999999998875443
No 101
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.64 E-value=1.1e-15 Score=117.97 Aligned_cols=117 Identities=16% Similarity=0.176 Sum_probs=91.2
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHH------HHHHHHHHccCC---CCceEEEec-c-
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSV------VIEAMMKKYSNR---PQLKYIKMD-V- 103 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~------~i~~~~~~~~~~---~~~~~~~~d-~- 103 (207)
..++..+..+++.+|||+|||+|.++..+++. +. .+++++|+++. +++.+++++... .++.+.+.| .
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh
Confidence 34444443344459999999999999999987 43 59999999997 899999887643 478999998 3
Q ss_pred -ccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 104 -RQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 104 -~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
... +++.++||+|++..+++++ .+...+++.+.++++|||.+++.++..+
T Consensus 113 ~~~~-~~~~~~fD~v~~~~~l~~~-------~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 113 DDLG-PIADQHFDRVVLAHSLWYF-------ASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp TCCG-GGTTCCCSEEEEESCGGGS-------SCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred hccC-CCCCCCEEEEEEccchhhC-------CCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 333 5677899999999999988 5556677777778888999999886543
No 102
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.64 E-value=1.7e-15 Score=116.16 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=86.6
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccc-cCCCCeeEEEeCcch
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDE-FQTGSFDSVVDKGTL 123 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~-~~~~~fD~v~~~~~l 123 (207)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++... .++.++++|+.+... ++.++||+|+++.++
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 4599999999999999999986569999999999999999987632 369999999998732 457899999998776
Q ss_pred hhhc-cCCC------------ChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 124 DSLL-CGSN------------SRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 124 ~~~~-~~~~------------~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.... .+.. .......+++.+.++|+|||.++++..
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 5430 0110 113567899999999999999999663
No 103
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.64 E-value=1.5e-16 Score=114.11 Aligned_cols=104 Identities=13% Similarity=0.190 Sum_probs=80.7
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCC-CceEEEeccccccc-cC--CCCeeEEEeCcchh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRP-QLKYIKMDVRQMDE-FQ--TGSFDSVVDKGTLD 124 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~-~~~~~~~d~~~~~~-~~--~~~fD~v~~~~~l~ 124 (207)
.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++.... ++.+++.|+.+..+ .. .++||+|+++.+++
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA 121 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT
T ss_pred CeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc
Confidence 4999999999999999999877 59999999999999999875322 78999999987422 11 34899999987764
Q ss_pred hhccCCCChhhHHHHHHHHH--HhcCCCcEEEEEEeCCcc
Q 028547 125 SLLCGSNSRQNATQMLKEVW--RVLKDKGVYILVTYGAPI 162 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~--~~L~pgG~~~~~~~~~~~ 162 (207)
- .....++.+. ++|+|||.+++.+.....
T Consensus 122 -~--------~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 122 -M--------DLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp -S--------CTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred -h--------hHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 1 1233444455 999999999998865443
No 104
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.63 E-value=1.4e-15 Score=117.65 Aligned_cols=143 Identities=12% Similarity=0.140 Sum_probs=98.9
Q ss_pred hhchhhhhcccCCceeeecCccCHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHcc
Q 028547 13 PWYWDNRYAHESGPFDWYQKYPSLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYS 91 (207)
Q Consensus 13 ~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~ 91 (207)
.+||...+......+......+.+.+.+...+..++.+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++..
T Consensus 75 ~~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~ 154 (276)
T 2b3t_A 75 REFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ 154 (276)
T ss_dssp EEETTEEEECCTTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHH
T ss_pred eEECCceEEeCCCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 356666555444443333333333333333333333499999999999999998753 3499999999999999999875
Q ss_pred C--CCCceEEEeccccccccCCCCeeEEEeCcchhhhc---------cCC---------CChhhHHHHHHHHHHhcCCCc
Q 028547 92 N--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL---------CGS---------NSRQNATQMLKEVWRVLKDKG 151 (207)
Q Consensus 92 ~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~---------~~~---------~~~~~~~~~l~~~~~~L~pgG 151 (207)
. ..++.++++|+.+. .+.++||+|+++.++.... ... .+......+++.+.++|+|||
T Consensus 155 ~~~~~~v~~~~~d~~~~--~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG 232 (276)
T 2b3t_A 155 HLAIKNIHILQSDWFSA--LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGG 232 (276)
T ss_dssp HHTCCSEEEECCSTTGG--GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred HcCCCceEEEEcchhhh--cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCC
Confidence 2 24799999999875 3467899999986554220 000 011467889999999999999
Q ss_pred EEEEEE
Q 028547 152 VYILVT 157 (207)
Q Consensus 152 ~~~~~~ 157 (207)
.+++..
T Consensus 233 ~l~~~~ 238 (276)
T 2b3t_A 233 FLLLEH 238 (276)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 999865
No 105
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.63 E-value=3.9e-15 Score=119.52 Aligned_cols=115 Identities=18% Similarity=0.249 Sum_probs=93.3
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEecccccc-ccCCC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMD-EFQTG 112 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~-~~~~~ 112 (207)
.++.........+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++++... .+++|..+|+.+.. +++ +
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~ 247 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-T 247 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-C
T ss_pred HHHHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-C
Confidence 344443333445999999999999999998643 48999999 99999999987643 47999999999863 345 7
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+||+|++..++|++ +..+...+++++++.|+|||.+++....
T Consensus 248 ~~D~v~~~~vlh~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 248 GFDAVWMSQFLDCF-----SEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp CCSEEEEESCSTTS-----CHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CcCEEEEechhhhC-----CHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 89999999999877 5566788999999999999999998753
No 106
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.63 E-value=5.2e-15 Score=109.56 Aligned_cols=108 Identities=11% Similarity=0.130 Sum_probs=85.2
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CC-CceEEEeccccccccCCCCee
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RP-QLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~-~~~~~~~d~~~~~~~~~~~fD 115 (207)
++..+...++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++... .. ++.++++|+.+..+ ....||
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~~~~D 124 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-DLPLPE 124 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-TSCCCS
T ss_pred HHHhcCCCCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-cCCCCC
Confidence 33444344445999999999999999999854 999999999999999998653 24 79999999998422 335799
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+|++...+ +.. +++++.++|+|||.+++.....
T Consensus 125 ~v~~~~~~-----------~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 125 AVFIGGGG-----------SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp EEEECSCC-----------CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred EEEECCcc-----------cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 99976532 334 8999999999999999987543
No 107
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=3.2e-15 Score=107.86 Aligned_cols=111 Identities=14% Similarity=0.201 Sum_probs=85.1
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC--C-CceEEEeccccccccCCCCe
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR--P-QLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~--~-~~~~~~~d~~~~~~~~~~~f 114 (207)
++..+...++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++... . ++ ++..|..+..+...++|
T Consensus 17 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~ 95 (178)
T 3hm2_A 17 AISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNP 95 (178)
T ss_dssp HHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCC
T ss_pred HHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCC
Confidence 3334433444599999999999999998874 249999999999999999987643 3 67 88888766433333789
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|+|++...+++ ..+++++.++|+|||.+++.+...+
T Consensus 96 D~i~~~~~~~~-----------~~~l~~~~~~L~~gG~l~~~~~~~~ 131 (178)
T 3hm2_A 96 DVIFIGGGLTA-----------PGVFAAAWKRLPVGGRLVANAVTVE 131 (178)
T ss_dssp SEEEECC-TTC-----------TTHHHHHHHTCCTTCEEEEEECSHH
T ss_pred CEEEECCcccH-----------HHHHHHHHHhcCCCCEEEEEeeccc
Confidence 99998877653 5689999999999999998875443
No 108
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.63 E-value=2.3e-15 Score=129.25 Aligned_cols=105 Identities=15% Similarity=0.244 Sum_probs=88.7
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCC--CcEEEEeCCHHHHHHHHHHcc--------CCCCceEEEeccccccccCCCCeeE
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGY--EDVVNVDISSVVIEAMMKKYS--------NRPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~i~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
.+.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.|++++. ...++.|+++|+.++ ++..++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-p~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-DSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-CTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-CcccCCeeE
Confidence 445999999999999999999872 499999999999999988543 225799999999998 567889999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|++..+++|+ .......+++++.++|+|| .+++.+.
T Consensus 800 VV~~eVLeHL-----~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 800 GTCLEVIEHM-----EEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEEESCGGGS-----CHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EEEeCchhhC-----ChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 9999999998 4445567999999999998 7777663
No 109
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.62 E-value=2.1e-15 Score=112.45 Aligned_cols=111 Identities=18% Similarity=0.239 Sum_probs=83.7
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEecccccc-ccCCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMD-EFQTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~-~~~~~~fD~v~~~~ 121 (207)
..+ +|||+|||+|.++..+++... .+++|+|+++.+++.++++... ..++.++++|+.++. .++.++||.|++..
T Consensus 38 ~~~-~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNP-IHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCC-EEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCc-eEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 344 999999999999999998743 4999999999999999988652 258999999998862 15678899998753
Q ss_pred chhhhcc-CCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 122 TLDSLLC-GSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 122 ~l~~~~~-~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+..+... +.........+++++.++|+|||.+++.+
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 3221100 00000114788999999999999999987
No 110
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.62 E-value=1.7e-15 Score=116.67 Aligned_cols=102 Identities=15% Similarity=0.290 Sum_probs=82.5
Q ss_pred CcEEEEcCCCch----hhHHHHhc-C----CCcEEEEeCCHHHHHHHHHHcc------------------------CC--
Q 028547 49 QRILIVGCGNSA----FSEGMVDD-G----YEDVVNVDISSVVIEAMMKKYS------------------------NR-- 93 (207)
Q Consensus 49 ~~vLdiG~G~G~----~~~~l~~~-~----~~~v~~~D~s~~~i~~~~~~~~------------------------~~-- 93 (207)
.+|||+|||+|. ++..+++. + ..+|+|+|+|+.+++.|+++.. ..
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 186 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLV 186 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEE
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCce
Confidence 499999999998 55556554 2 1289999999999999998641 00
Q ss_pred -------CCceEEEeccccccccC-CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 94 -------PQLKYIKMDVRQMDEFQ-TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 94 -------~~~~~~~~d~~~~~~~~-~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
.++.|.+.|+.+. +++ .++||+|+|.+++.++ .......+++++++.|+|||.+++-
T Consensus 187 ~v~~~lr~~V~F~~~dl~~~-~~~~~~~fDlI~crnvliyf-----~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 187 RVRQELANYVEFSSVNLLEK-QYNVPGPFDAIFCRNVMIYF-----DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EECHHHHTTEEEEECCTTCS-SCCCCCCEEEEEECSSGGGS-----CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eechhhcccCeEEecccCCC-CCCcCCCeeEEEECCchHhC-----CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 2689999999885 444 5789999999999988 5566799999999999999999873
No 111
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.62 E-value=2.1e-15 Score=120.04 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=83.8
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
++.+|||+|||+|.++..+++.+..+|+++|+++ +++.+++++... .++.++++|+.+. +++.++||+|++..+.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV-HLPVEKVDVIISEWMG 141 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSCSCEEEEEECCCB
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCCCCcEEEEEEcCch
Confidence 3449999999999999999998766999999997 899998876532 5799999999987 5677899999987632
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYI 154 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~ 154 (207)
..+ ........+++++.++|+|||.++
T Consensus 142 ~~l----~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFL----LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTB----TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhc----cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 222 123677889999999999999987
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=3.4e-15 Score=108.72 Aligned_cols=107 Identities=17% Similarity=0.209 Sum_probs=86.4
Q ss_pred HhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCC-CCeeE
Q 028547 41 KLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQT-GSFDS 116 (207)
Q Consensus 41 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~-~~fD~ 116 (207)
......++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++... .++.+.+.|+.+. ++. ++||+
T Consensus 27 ~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~ 103 (192)
T 1l3i_A 27 CLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA--LCKIPDIDI 103 (192)
T ss_dssp HHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH--HTTSCCEEE
T ss_pred HhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh--cccCCCCCE
Confidence 33333444599999999999999999987 59999999999999999876532 4789999998873 232 58999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
|++..++++ ...+++++.++|+|||.+++..+..
T Consensus 104 v~~~~~~~~----------~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 104 AVVGGSGGE----------LQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp EEESCCTTC----------HHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred EEECCchHH----------HHHHHHHHHHhcCCCcEEEEEecCc
Confidence 999876654 3789999999999999999987543
No 113
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.62 E-value=1.6e-15 Score=121.66 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=89.3
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHcc---------C--CCCceEEEecc
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYS---------N--RPQLKYIKMDV 103 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~---------~--~~~~~~~~~d~ 103 (207)
+..++......++.+|||||||+|.++..++.. +..+++|+|+++.+++.|+++.. . ..++.|+++|+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~ 241 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF 241 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc
Confidence 455666554455559999999999999999865 44469999999999988876431 1 25799999999
Q ss_pred ccccccCC--CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 104 RQMDEFQT--GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 104 ~~~~~~~~--~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.+. ++.. ..||+|+++.++.. .+....|.++++.|||||.|++...
T Consensus 242 ~~l-p~~d~~~~aDVVf~Nn~~F~--------pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 242 LSE-EWRERIANTSVIFVNNFAFG--------PEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp TSH-HHHHHHHTCSEEEECCTTCC--------HHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred cCC-ccccccCCccEEEEcccccC--------chHHHHHHHHHHcCCCCcEEEEeec
Confidence 987 4433 47999999876542 6788888999999999999998754
No 114
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=3.1e-15 Score=120.40 Aligned_cols=118 Identities=17% Similarity=0.214 Sum_probs=89.2
Q ss_pred HHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-----CCceEEEeccccccccCCCC
Q 028547 40 IKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-----PQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 40 l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~ 113 (207)
+..+....+.+|||+|||+|.++..+++.+. .+|+++|+++.+++.+++++... .++.|...|+.+. ++.++
T Consensus 215 l~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~--~~~~~ 292 (375)
T 4dcm_A 215 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG--VEPFR 292 (375)
T ss_dssp HHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT--CCTTC
T ss_pred HHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc--CCCCC
Confidence 3333333335999999999999999999863 59999999999999999987632 2578899999885 46789
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
||+|+++.++++... ........+++++.++|+|||.++++.....
T Consensus 293 fD~Ii~nppfh~~~~--~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHA--LTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp EEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred eeEEEECCCcccCcc--cCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 999999998875310 0123445789999999999999999875444
No 115
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.61 E-value=1.3e-15 Score=109.98 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=85.3
Q ss_pred hhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCeeEEEe
Q 028547 42 LYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFDSVVD 119 (207)
Q Consensus 42 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~v~~ 119 (207)
.+++... +|||+|||+|.++..++...+ .+|+++|+++.+++.+++++... ....+...|.... .+.++||+|++
T Consensus 45 ~~l~~~~-~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~--~~~~~~DvVLa 121 (200)
T 3fzg_A 45 GNIKHVS-SILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD--VYKGTYDVVFL 121 (200)
T ss_dssp HHSCCCS-EEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH--HTTSEEEEEEE
T ss_pred hhcCCCC-eEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc--CCCCCcChhhH
Confidence 3455555 999999999999999977743 49999999999999999998642 2223444666554 36788999999
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..++|++ ++.+..+.++++.|+|||+|+-..
T Consensus 122 ~k~LHlL-------~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 122 LKMLPVL-------KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ETCHHHH-------HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhHHHhh-------hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 9999999 888888889999999999987644
No 116
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.61 E-value=7.3e-15 Score=110.98 Aligned_cols=140 Identities=16% Similarity=0.104 Sum_probs=98.2
Q ss_pred CCCCCChhchhhhhcccCCceeeec--Ccc-CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHH
Q 028547 7 TQAYGEPWYWDNRYAHESGPFDWYQ--KYP-SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVI 83 (207)
Q Consensus 7 ~~~~~~~~~w~~~~~~~~~~~~~~~--~~~-~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i 83 (207)
...|....+|...|......+.... ... ....++..+...++.+|||+|||+|.++..+++.+..+|+++|+++.++
T Consensus 48 r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~ 127 (235)
T 1jg1_A 48 RYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELV 127 (235)
T ss_dssp GGGGSCGGGGGGTTSSSCEECSTTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred HhhhCCchhhhcCccCCCcccCCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHH
Confidence 4456666777777765433322111 111 2333444443344459999999999999999987525999999999999
Q ss_pred HHHHHHccC--CCCceEEEeccccccccCC-CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 84 EAMMKKYSN--RPQLKYIKMDVRQMDEFQT-GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 84 ~~~~~~~~~--~~~~~~~~~d~~~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+.+++++.. ..++.+..+|+... ++. .+||+|++..+++++ .+++.+.|+|||.+++.....
T Consensus 128 ~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~fD~Ii~~~~~~~~-------------~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 128 EFAKRNLERAGVKNVHVILGDGSKG--FPPKAPYDVIIVTAGAPKI-------------PEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp HHHHHHHHHTTCCSEEEEESCGGGC--CGGGCCEEEEEECSBBSSC-------------CHHHHHTEEEEEEEEEEECSS
T ss_pred HHHHHHHHHcCCCCcEEEECCcccC--CCCCCCccEEEECCcHHHH-------------HHHHHHhcCCCcEEEEEEecC
Confidence 999998753 24689999998432 333 459999999888776 236889999999999987544
Q ss_pred c
Q 028547 161 P 161 (207)
Q Consensus 161 ~ 161 (207)
.
T Consensus 193 ~ 193 (235)
T 1jg1_A 193 H 193 (235)
T ss_dssp S
T ss_pred C
Confidence 3
No 117
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.61 E-value=2.5e-14 Score=110.64 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=80.7
Q ss_pred CCCCcEEEEcCCCchhhH-HHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 46 SHHQRILIVGCGNSAFSE-GMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~-~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
+++.+|||+|||+|.++. .+++....+|+++|+++++++.|++++.. ..+++|+++|+.++ ++++||+|++...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l---~d~~FDvV~~~a~ 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI---DGLEFDVLMVAAL 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG---GGCCCSEEEECTT
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC---CCCCcCEEEECCC
Confidence 344599999999987664 44553224999999999999999998652 26899999999886 3689999997543
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
. .+...+++++.++|||||.+++...
T Consensus 198 ---~-------~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 ---A-------EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---C-------SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---c-------cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 2 5778999999999999999998773
No 118
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=2e-15 Score=116.99 Aligned_cols=111 Identities=9% Similarity=0.078 Sum_probs=88.7
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--C-CCceEEEeccccccccCCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--R-PQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~-~~~~~~~~d~~~~~~~~~~ 112 (207)
....+.....+.. +|||+|||+|.++..+++.+..+|+++|+++.+++.+++++.. . .++.++++|+.+.. ..+
T Consensus 115 ~~~~l~~~~~~~~-~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~--~~~ 191 (278)
T 2frn_A 115 ERVRMAKVAKPDE-LVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GEN 191 (278)
T ss_dssp HHHHHHHHCCTTC-EEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCS
T ss_pred HHHHHHHhCCCCC-EEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc--ccC
Confidence 3444444544444 9999999999999999998765799999999999999998762 2 24889999999984 277
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+||+|+++.+.. ...+++.+.++|+|||.+++.+++.
T Consensus 192 ~fD~Vi~~~p~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 192 IADRILMGYVVR-----------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CEEEEEECCCSS-----------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CccEEEECCchh-----------HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 899999865422 2567888999999999999988764
No 119
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.60 E-value=1.7e-15 Score=120.91 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=84.2
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
++|||+|||+|.++..+++.+..+|+|+|+++ +++.++++.... .++.++++|+.+. +++.++||+|++..+.+.
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCCBBT
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEcccccc
Confidence 49999999999999999999767999999995 999998876532 3499999999998 577889999999765443
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
+ ........+++.+.++|+|||.++.
T Consensus 146 l----~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 146 L----FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp B----TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred c----cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 3 1236788899999999999999864
No 120
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.60 E-value=2.3e-15 Score=120.01 Aligned_cols=111 Identities=19% Similarity=0.277 Sum_probs=88.4
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
.....+|||+|||+|.++..+++.+. .+++++|+++.+++.+++++... ...++...|+.+. ..++||+|+++.+
T Consensus 194 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~---~~~~fD~Iv~~~~ 270 (343)
T 2pjd_A 194 PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE---VKGRFDMIISNPP 270 (343)
T ss_dssp TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT---CCSCEEEEEECCC
T ss_pred cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc---ccCCeeEEEECCC
Confidence 33345999999999999999999875 39999999999999999987632 3467888888765 3678999999988
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+++... ........+++++.++|+|||.++++....
T Consensus 271 ~~~g~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 271 FHDGMQ--TSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CCSSSH--HHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred cccCcc--CCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 874100 012577899999999999999999987543
No 121
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.60 E-value=4.4e-15 Score=113.55 Aligned_cols=109 Identities=14% Similarity=0.181 Sum_probs=87.7
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCee
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD 115 (207)
.+.+.....+.. +|||+|||+|.++..+++.+. +|+++|+++.+++.++++.... ..+.+.+.|+.+. ++.++||
T Consensus 111 ~~~l~~~~~~~~-~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~--~~~~~fD 186 (254)
T 2nxc_A 111 LKALARHLRPGD-KVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFD 186 (254)
T ss_dssp HHHHHHHCCTTC-EEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEE
T ss_pred HHHHHHhcCCCC-EEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc--CcCCCCC
Confidence 344544544444 999999999999999999887 9999999999999999987632 2288999988874 3467899
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+|+++...+. ...+++.+.++|+|||.+++....
T Consensus 187 ~Vv~n~~~~~----------~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 187 LLVANLYAEL----------HAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EEEEECCHHH----------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCcHHH----------HHHHHHHHHHHcCCCCEEEEEeec
Confidence 9998765443 478899999999999999997643
No 122
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.60 E-value=4.5e-15 Score=119.64 Aligned_cols=104 Identities=15% Similarity=0.132 Sum_probs=85.2
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
++++|||+|||+|.++..+++.+..+|+++|++ .+++.+++++... .++.++++|+.+. +++ ++||+|++..+.
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI-SLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC-CCS-SCEEEEEECCCB
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc-CcC-CcceEEEEcChh
Confidence 345999999999999999999987799999999 8999998886532 3589999999987 344 899999996544
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+.+ ..+.....+++.+.++|+|||.+++..
T Consensus 140 ~~l----~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 140 YFL----LRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TTB----TTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hcc----cchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 443 123567889999999999999998743
No 123
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.59 E-value=5.3e-15 Score=111.40 Aligned_cols=101 Identities=14% Similarity=0.226 Sum_probs=81.4
Q ss_pred CCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc---cccCCCCeeEEEeCcc
Q 028547 47 HHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM---DEFQTGSFDSVVDKGT 122 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~fD~v~~~~~ 122 (207)
++.+|||+|||+|.++..+++. +..+|+++|+++.+++.++++.....++.++.+|+.+. .++. ++||+|+..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~-- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED-- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC--
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe--
Confidence 3349999999999999999987 33599999999999999999877657899999999872 1344 789999932
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+ ........+++++.++|+|||.+++..
T Consensus 151 ---~----~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 151 ---V----AQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp ---C----CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---c----CChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 1 112345778999999999999999973
No 124
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=3.7e-17 Score=123.95 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=81.8
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++... .++.++++|+.+.. +.++||+|+++.+++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGM-RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPWG 155 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCCS
T ss_pred CCEEEECccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCcC
Confidence 34999999999999999999874 9999999999999999987632 37999999999873 567999999999888
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
+. .+....+.++.++|+|||.+++.
T Consensus 156 ~~-------~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GP-------DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SG-------GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred Cc-------chhhhHHHHHHhhcCCcceeHHH
Confidence 76 44444566777888888876553
No 125
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=1.9e-14 Score=104.05 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=83.8
Q ss_pred HHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCCeeEE
Q 028547 40 IKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 40 l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
+..+...++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++... .++.+++.|+.+. ++.++||+|
T Consensus 28 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~i 104 (183)
T 2yxd_A 28 IGKLNLNKDDVVVDVGCGSGGMTVEIAKR-CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--LDKLEFNKA 104 (183)
T ss_dssp HHHHCCCTTCEEEEESCCCSHHHHHHHTT-SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH--GGGCCCSEE
T ss_pred HHHcCCCCCCEEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc--ccCCCCcEE
Confidence 33333334459999999999999999984 459999999999999999987532 5789999999883 456789999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++..+ .+...+++++.++ |||.+++.+...
T Consensus 105 ~~~~~-----------~~~~~~l~~~~~~--~gG~l~~~~~~~ 134 (183)
T 2yxd_A 105 FIGGT-----------KNIEKIIEILDKK--KINHIVANTIVL 134 (183)
T ss_dssp EECSC-----------SCHHHHHHHHHHT--TCCEEEEEESCH
T ss_pred EECCc-----------ccHHHHHHHHhhC--CCCEEEEEeccc
Confidence 98866 2457888888888 999999987543
No 126
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.59 E-value=4e-15 Score=107.02 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=78.7
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhcc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLC 128 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~ 128 (207)
.+|||+|||+|.++..+++.+ +++|+|+++.+++. ..++.++++|+.+. ++.++||+|+++.++++...
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~-------~~~~~~~~~d~~~~--~~~~~fD~i~~n~~~~~~~~ 93 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES-------HRGGNLVRADLLCS--INQESVDVVVFNPPYVPDTD 93 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT-------CSSSCEEECSTTTT--BCGGGCSEEEECCCCBTTCC
T ss_pred CeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc-------ccCCeEEECChhhh--cccCCCCEEEECCCCccCCc
Confidence 499999999999999999987 99999999999887 25789999999884 45589999999988875410
Q ss_pred C--CCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 129 G--SNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 129 ~--~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
. ..+..+...+++++.+.+ |||.+++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 0 001123456788888888 99999997754
No 127
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.59 E-value=2e-14 Score=110.56 Aligned_cols=106 Identities=24% Similarity=0.385 Sum_probs=84.7
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeE
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
..+...++.++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++. .++.+...|+.+. ++++++||+
T Consensus 76 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~-~~~~~~fD~ 151 (269)
T 1p91_A 76 AQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---PQVTFCVASSHRL-PFSDTSMDA 151 (269)
T ss_dssp HHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---TTSEEEECCTTSC-SBCTTCEEE
T ss_pred HHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcchhhC-CCCCCceeE
Confidence 33344343344599999999999999999873 249999999999999999876 4689999999887 577789999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|++..+. ..++++.++|+|||.+++.+....
T Consensus 152 v~~~~~~--------------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 152 IIRIYAP--------------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp EEEESCC--------------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEeCCh--------------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 9985432 247889999999999999886554
No 128
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.58 E-value=7.8e-15 Score=117.16 Aligned_cols=106 Identities=12% Similarity=0.221 Sum_probs=88.9
Q ss_pred CCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
..+|||+|||+|.++..+++... .+++++|+ +.+++.++++.... .++++..+|+.+..++..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 45999999999999999998754 48999999 78999998876532 469999999998733345679999999999
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
|++ +..+...+++++++.|+|||.+++.+..
T Consensus 259 h~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 259 HYF-----DAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp GGS-----CHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccC-----CHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 987 4556799999999999999999998753
No 129
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=4.3e-15 Score=112.08 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=82.7
Q ss_pred CCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccc-cCCCCeeEEEeCcc
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDE-FQTGSFDSVVDKGT 122 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~-~~~~~fD~v~~~~~ 122 (207)
+.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .++.++++|+.+..+ ...++||+|++...
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 3499999999999999999853 259999999999999999987632 379999999988644 34689999997643
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. .....+++.+.++|+|||.+++..
T Consensus 152 ~----------~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 152 K----------AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp S----------SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred H----------HHHHHHHHHHHHhcCCCeEEEEee
Confidence 2 456789999999999999998854
No 130
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.58 E-value=2.6e-14 Score=114.90 Aligned_cols=107 Identities=11% Similarity=0.110 Sum_probs=88.6
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccCCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
....+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++++.. ..+++|..+|+.+ +++. .||+|++..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~--~~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE--TIPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT--CCCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC--CCCC-CceEEEhhh
Confidence 3345999999999999999998754 48999999 9999999987652 2579999999984 3454 899999999
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+++++ +......+++++++.|+|||.+++.+...+
T Consensus 277 vlh~~-----~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 277 VLHDW-----DDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp CGGGS-----CHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred hhccC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99987 444556899999999999999999875433
No 131
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.58 E-value=4.3e-15 Score=112.61 Aligned_cols=98 Identities=15% Similarity=0.102 Sum_probs=80.8
Q ss_pred CCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccC---CCCeeEEEeCc
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQ---TGSFDSVVDKG 121 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~---~~~fD~v~~~~ 121 (207)
+.+|||+|||+|..+..++... ..+|+++|+++.+++.++++... ..++.++++|+.++ ++. .++||+|++..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETF-GQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHH-TTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHh-cccccccCCccEEEEec
Confidence 3499999999999999998642 24999999999999999987652 24799999999886 332 57899999865
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+ .+...+++.+.++|+|||.+++..
T Consensus 150 ~-----------~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 150 V-----------ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp C-----------SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred c-----------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 456899999999999999998865
No 132
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.58 E-value=8.6e-15 Score=114.06 Aligned_cols=110 Identities=17% Similarity=0.278 Sum_probs=82.3
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHcc-------CCCCceEEEeccccccccCCCCeeE
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYS-------NRPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
.+++++|||||||+|.++..+++.. ..+|+++|+++.+++.+++++. ..++++++.+|+.+......++||+
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 3444599999999999999999874 3589999999999999999864 1358999999998864445688999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|++...-... ....-....+++.+.+.|+|||++++..
T Consensus 161 Ii~D~~~p~~---~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIG---PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC-------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccC---cchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 9986443211 1111123789999999999999999976
No 133
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=9.1e-16 Score=113.81 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=68.4
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCC-----CCeeEEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQT-----GSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~-----~~fD~v~ 118 (207)
.++.+|||+|||+|.++..+++.+. .+++++|+++.+++.+++++... .+++++++|+.+. ++. ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEW--LIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHH--HHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhh--hhhhhhccCcccEEE
Confidence 3345999999999999999999854 39999999999999999887643 2688888998874 344 8999999
Q ss_pred eCcchhhhcc-------------------CCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLC-------------------GSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~-------------------~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++.+++.... +..+......+++++.++|+|||.+++...
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9876643210 001112237888999999999999554443
No 134
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.58 E-value=8.8e-15 Score=111.53 Aligned_cols=110 Identities=14% Similarity=0.095 Sum_probs=84.2
Q ss_pred CCcEEEEcCCCchhhHHHHhc--C-CCcEEEEeCCHHHHHHHHHHccCCC------C-----------------------
Q 028547 48 HQRILIVGCGNSAFSEGMVDD--G-YEDVVNVDISSVVIEAMMKKYSNRP------Q----------------------- 95 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~--~-~~~v~~~D~s~~~i~~~~~~~~~~~------~----------------------- 95 (207)
+.+|||+|||+|.++..+++. . ..+|+|+|+++.+++.++++..... +
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 349999999999999999876 2 2489999999999999998765420 1
Q ss_pred --ce-------------EEEecccccccc----CCCCeeEEEeCcchhhhccC--CCChhhHHHHHHHHHHhcCCCcEEE
Q 028547 96 --LK-------------YIKMDVRQMDEF----QTGSFDSVVDKGTLDSLLCG--SNSRQNATQMLKEVWRVLKDKGVYI 154 (207)
Q Consensus 96 --~~-------------~~~~d~~~~~~~----~~~~fD~v~~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~pgG~~~ 154 (207)
+. |.+.|+.+..+. ...+||+|+++.++...... .........+++++.++|+|||.++
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEE
Confidence 56 999998875321 34589999998777654110 1124677899999999999999999
Q ss_pred EEE
Q 028547 155 LVT 157 (207)
Q Consensus 155 ~~~ 157 (207)
++.
T Consensus 212 ~~~ 214 (250)
T 1o9g_A 212 VTD 214 (250)
T ss_dssp EEE
T ss_pred EeC
Confidence 854
No 135
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.57 E-value=1.2e-14 Score=115.25 Aligned_cols=104 Identities=12% Similarity=0.133 Sum_probs=87.5
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
.+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++++.. ..+++|...|+.+ +.+. +||+|++..++|
T Consensus 171 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~p~-~~D~v~~~~vlh 246 (332)
T 3i53_A 171 GHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD--PLPA-GAGGYVLSAVLH 246 (332)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS--CCCC-SCSEEEEESCGG
T ss_pred CEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC--CCCC-CCcEEEEehhhc
Confidence 4999999999999999988654 48999999 9999999987652 2579999999984 3444 899999999999
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
++ +.+....+++++++.|+|||.+++.+...+
T Consensus 247 ~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 247 DW-----DDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp GS-----CHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred cC-----CHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 88 445579999999999999999999875433
No 136
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.57 E-value=1.6e-14 Score=114.51 Aligned_cols=108 Identities=14% Similarity=0.232 Sum_probs=89.2
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccCCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
.+..+|||+|||+|.++..+++... .+++++|++ .+++.+++++.. ..+++|..+|+.+. +++. .||+|++..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~-~~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV-DYGN-DYDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS-CCCS-CEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC-CCCC-CCcEEEEcc
Confidence 3445999999999999999998742 399999999 999999987642 13699999999886 4443 499999999
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+++++ +..+...++++++++|+|||.+++.+...+
T Consensus 241 ~l~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 241 FLHHF-----DVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred hhccC-----CHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 99987 556778999999999999999999875443
No 137
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=9.9e-15 Score=116.51 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=83.7
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--C-CCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--R-PQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
.++.+|||+|||+|.++..+++.+..+|+++|+++ +++.+++++.. . .++.++.+|+.+. +.+ ++||+|++..+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLP-EQVDIIISEPM 125 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCS-SCEEEEEECCC
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC-CCC-CceeEEEEeCc
Confidence 34459999999999999999998767999999996 77888877652 2 5799999999987 333 68999999987
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
++++ ..+.....+.++.++|+|||.+++.
T Consensus 126 ~~~~-----~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 126 GYML-----FNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTB-----TTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hhcC-----ChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7765 2345667788899999999999854
No 138
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.57 E-value=3.7e-14 Score=109.94 Aligned_cols=104 Identities=16% Similarity=0.190 Sum_probs=83.5
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeC-CHHHHHHHHHHc-----cCC-------CCceEEEeccccc-ccc---
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDI-SSVVIEAMMKKY-----SNR-------PQLKYIKMDVRQM-DEF--- 109 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~-s~~~i~~~~~~~-----~~~-------~~~~~~~~d~~~~-~~~--- 109 (207)
.+.+|||+|||+|.++..+++.+..+|+++|+ ++.+++.++++. ... .++.+...+..+. ...
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 33499999999999999999987669999999 899999999987 322 2677887665542 111
Q ss_pred -CCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcC---C--CcEEEEEE
Q 028547 110 -QTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLK---D--KGVYILVT 157 (207)
Q Consensus 110 -~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~---p--gG~~~~~~ 157 (207)
..++||+|++..++++. .+...+++.+.++|+ | ||.++++.
T Consensus 159 ~~~~~fD~Ii~~dvl~~~-------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH-------QAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HSCSSBSEEEEESCCSCG-------GGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred ccCCCCCEEEEeCcccCh-------HHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 35789999998888876 789999999999999 9 99887754
No 139
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.57 E-value=8.8e-15 Score=109.53 Aligned_cols=105 Identities=10% Similarity=0.023 Sum_probs=83.3
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCC-----CCeeEE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQT-----GSFDSV 117 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~-----~~fD~v 117 (207)
+.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .+++++++|+.+..+... ++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 3499999999999999999852 249999999999999999986532 369999999877433222 689999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++....++. .....+++.+ ++|+|||.+++.....
T Consensus 139 ~~d~~~~~~-------~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 139 FLDHWKDRY-------LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EECSCGGGH-------HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEcCCcccc-------hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 998777665 5556677777 9999999999876443
No 140
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.56 E-value=1e-14 Score=109.21 Aligned_cols=98 Identities=8% Similarity=0.174 Sum_probs=80.7
Q ss_pred cEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC----CCceEEEeccccccc-cCCCCeeEEEeCcc
Q 028547 50 RILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR----PQLKYIKMDVRQMDE-FQTGSFDSVVDKGT 122 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~----~~~~~~~~d~~~~~~-~~~~~fD~v~~~~~ 122 (207)
+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .+++++++|+.+..+ +..++||+|++...
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVS 138 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCc
Confidence 89999999999999998852 249999999999999999987632 369999999988633 33689999998643
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. .....+++.+.++|+|||++++..
T Consensus 139 ~----------~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 139 P----------MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp T----------TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred H----------HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 2 345678999999999999999854
No 141
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.56 E-value=8.8e-15 Score=115.91 Aligned_cols=102 Identities=18% Similarity=0.214 Sum_probs=83.3
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
+.+|||+|||+|.++..+++.+..+|+++|++ .+++.+++++... .++.++.+|+.+. +++.++||+|++..+.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDV-HLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSSSCEEEEEECCCBT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhc-cCCCCcccEEEEeCchh
Confidence 34999999999999999999876799999999 5889888876532 4689999999987 46668999999975544
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
.+ ........++..+.++|+|||.++.
T Consensus 117 ~l----~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FL----LYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TB----STTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hc----ccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 33 1235678899999999999999973
No 142
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=1.9e-14 Score=109.65 Aligned_cols=101 Identities=13% Similarity=0.043 Sum_probs=82.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccC--CCCeeEEEeC
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQ--TGSFDSVVDK 120 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~--~~~fD~v~~~ 120 (207)
+.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .++.++++|+.+..+.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 3499999999999999999872 249999999999999999987532 47999999998743322 3489999986
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
... .....+++++.++|+|||++++...
T Consensus 144 ~~~----------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 144 ADK----------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp SCG----------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred Cch----------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 532 4567899999999999999998764
No 143
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.56 E-value=2.9e-14 Score=107.54 Aligned_cols=103 Identities=13% Similarity=0.170 Sum_probs=80.8
Q ss_pred CCCcEEEEcCCCchhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc--ccCCCCeeEEEeCcc
Q 028547 47 HHQRILIVGCGNSAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD--EFQTGSFDSVVDKGT 122 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~fD~v~~~~~ 122 (207)
++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.+.++.....++.++++|+.+.. +...++||+|++..+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 3349999999999999999987 2 24999999999877776665544368999999998842 345678999998644
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
. ......++.++.++|+|||.+++...
T Consensus 157 --~-------~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 157 --Q-------PDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp --C-------TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --C-------ccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 1 14556678899999999999999653
No 144
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.56 E-value=4.6e-14 Score=113.03 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=91.6
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~ 113 (207)
.++..+...+..+|||+|||+|.++..+++... .+++++|+ +.+++.+++++... .+++++.+|+.+. +++.
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~-- 256 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE-SYPE-- 256 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-CCCC--
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC-CCCC--
Confidence 344444333445999999999999999998753 48999999 99999999886522 3599999999987 4443
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+|+|++..+++++ +.+....++++++++|+|||.+++.++..+
T Consensus 257 ~D~v~~~~vlh~~-----~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 ADAVLFCRILYSA-----NEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp CSEEEEESCGGGS-----CHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CCEEEEechhccC-----CHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 3999999999987 445589999999999999999998885443
No 145
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.56 E-value=1.9e-14 Score=109.40 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=80.3
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHcc----------CCCCceEEEeccccccc--cCCCCee
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYS----------NRPQLKYIKMDVRQMDE--FQTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~----------~~~~~~~~~~d~~~~~~--~~~~~fD 115 (207)
.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.+++++. ...++.++++|+.+..+ +..+.+|
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d 130 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLS 130 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEE
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccC
Confidence 3999999999999999999865 489999999999999987653 22589999999987433 5678899
Q ss_pred EEEeCcchhhhcc-CCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 116 SVVDKGTLDSLLC-GSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 116 ~v~~~~~l~~~~~-~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+....-.+... ..........+++++.++|+|||.+++.+
T Consensus 131 ~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 131 KMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 9985421111000 00000011589999999999999999975
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=2.5e-14 Score=109.72 Aligned_cols=110 Identities=13% Similarity=0.123 Sum_probs=85.1
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC---C---CCceEEEecccccc------ccCCCCee
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN---R---PQLKYIKMDVRQMD------EFQTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~---~---~~~~~~~~d~~~~~------~~~~~~fD 115 (207)
.+|||+|||+|.++..+++... .+++++|+++.+++.+++++.. . .++.+++.|+.+.. .++.++||
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD 117 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFH 117 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEE
T ss_pred CEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcC
Confidence 4999999999999999998863 4999999999999999999765 3 25899999998872 24578999
Q ss_pred EEEeCcchhhhc-----------cCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 116 SVVDKGTLDSLL-----------CGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 116 ~v~~~~~l~~~~-----------~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+|+++.++.... ...........+++.+.++|+|||.++++..
T Consensus 118 ~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 118 HVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 999997765421 0000112467899999999999999998763
No 147
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.56 E-value=1.8e-14 Score=109.77 Aligned_cols=99 Identities=10% Similarity=0.044 Sum_probs=81.7
Q ss_pred CCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccc--cCCCCeeEEEeCcc
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDE--FQTGSFDSVVDKGT 122 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~--~~~~~fD~v~~~~~ 122 (207)
+.+|||+|||+|..+..++... ..+|+++|+++.+++.++++... ..++.++++|+.+... ...++||+|++..+
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc
Confidence 3499999999999999998863 24999999999999999998763 3579999999988732 12478999998643
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.+...+++.+.++|+|||.+++..
T Consensus 161 -----------~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 161 -----------APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp -----------CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred -----------CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 345789999999999999998866
No 148
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.55 E-value=1.6e-14 Score=113.89 Aligned_cols=108 Identities=17% Similarity=0.114 Sum_probs=86.2
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC--CcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCC
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY--EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~ 112 (207)
..++.....+++.+|||+|||+|.++..+++.+. .+|+++|+++.+++.+++++.. ..++.+..+|+.+.. ...+
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~-~~~~ 143 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-PEFS 143 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGC
T ss_pred HHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc-ccCC
Confidence 3444444344445999999999999999998754 2599999999999999998753 256999999998853 2457
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+||+|++..+++++ . +.+.+.|+|||.+++...
T Consensus 144 ~fD~Iv~~~~~~~~-------~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 144 PYDVIFVTVGVDEV-------P------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CEEEEEECSBBSCC-------C------HHHHHHEEEEEEEEEEBC
T ss_pred CeEEEEEcCCHHHH-------H------HHHHHhcCCCcEEEEEEC
Confidence 89999999999887 1 578899999999998753
No 149
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.55 E-value=3.5e-14 Score=114.22 Aligned_cols=113 Identities=17% Similarity=0.164 Sum_probs=89.9
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCC
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~ 112 (207)
..++..+..++..+|||+|||+|.++..+++... .+++++|+ +.+++.+++++... .+++|..+|+.+. ++.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~- 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP--LPV- 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--CSC-
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc--CCC-
Confidence 3444443333345999999999999999998753 48999999 99999999886532 3799999999863 333
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.||+|++..+++++ +......++++++++|+|||.+++.+.
T Consensus 248 ~~D~v~~~~vl~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 248 TADVVLLSFVLLNW-----SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CEEEEEEESCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCEEEEeccccCC-----CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 49999999999987 334456999999999999999998776
No 150
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.55 E-value=2.8e-14 Score=107.02 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=82.2
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCC------CcEEEEeCCHHHHHHHHHHccC-------CCCceEEEeccccccc---cC
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGY------EDVVNVDISSVVIEAMMKKYSN-------RPQLKYIKMDVRQMDE---FQ 110 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~------~~v~~~D~s~~~i~~~~~~~~~-------~~~~~~~~~d~~~~~~---~~ 110 (207)
++.+|||+|||+|.++..+++... .+|+++|+++.+++.+++++.. ..++.+...|+.+..+ ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 334999999999999999988642 4999999999999999988652 2479999999987520 34
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.++||+|++...++++ ++.+.+.|+|||.+++.....
T Consensus 160 ~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~~ 196 (227)
T 2pbf_A 160 LGLFDAIHVGASASEL-------------PEILVDLLAENGKLIIPIEED 196 (227)
T ss_dssp HCCEEEEEECSBBSSC-------------CHHHHHHEEEEEEEEEEEEET
T ss_pred CCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEccC
Confidence 5789999998887765 478899999999999987543
No 151
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.55 E-value=7.9e-14 Score=104.63 Aligned_cols=102 Identities=15% Similarity=0.230 Sum_probs=81.6
Q ss_pred CCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc--cCCCCeeEEEeCcc
Q 028547 47 HHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE--FQTGSFDSVVDKGT 122 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~fD~v~~~~~ 122 (207)
++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.++++.....++.++++|+.+... ...++||+|++..+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 3349999999999999999976 32 59999999999999998888765789999999987421 12468999997644
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. ......+++++.++|+|||.+++..
T Consensus 153 --~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 153 --Q-------PTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp --S-------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --C-------HhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1 1344556999999999999999874
No 152
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.54 E-value=2.5e-14 Score=107.30 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=81.9
Q ss_pred CCCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHHHHHHHHHHccC-------CCCceEEEeccccccccCCCCeeE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSVVIEAMMKKYSN-------RPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~i~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
+++.+|||+|||+|..+..+++. +. .+|+++|+++.+++.++++... ..++.+.+.|+... ....++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCE
Confidence 33459999999999999999886 33 4999999999999999987653 24789999999865 234678999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
|++..+++++ ++++.++|+|||.+++....
T Consensus 155 i~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVV-------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHH-------------HHHHHHhcCCCcEEEEEEec
Confidence 9998877665 46889999999999998754
No 153
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.54 E-value=1.4e-14 Score=103.99 Aligned_cols=113 Identities=11% Similarity=0.129 Sum_probs=83.8
Q ss_pred HHHHHhhC-CCCCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc-----
Q 028547 37 APLIKLYV-PSHHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE----- 108 (207)
Q Consensus 37 ~~~l~~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~----- 108 (207)
.+++..+. .+++.+|||+|||+|.++..+++. +. .+++++|+++ ++.. .++.+.+.|+.+. +
T Consensus 11 ~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~~-~~~~~~ 80 (180)
T 1ej0_A 11 DEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------VGVDFLQGDFRDE-LVMKAL 80 (180)
T ss_dssp HHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------TTEEEEESCTTSH-HHHHHH
T ss_pred HHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------CcEEEEEcccccc-hhhhhh
Confidence 34455443 233349999999999999999887 43 5999999998 5432 4789999999886 3
Q ss_pred ---cCCCCeeEEEeCcchhhhccCCCChhh------HHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 109 ---FQTGSFDSVVDKGTLDSLLCGSNSRQN------ATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 109 ---~~~~~fD~v~~~~~l~~~~~~~~~~~~------~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
++.++||+|+++.++++.. ....+. ...+++++.++|+|||.+++..+...
T Consensus 81 ~~~~~~~~~D~i~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 81 LERVGDSKVQVVMSDMAPNMSG--TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHTTCCEEEEEECCCCCCCS--CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred hccCCCCceeEEEECCCccccC--CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 5678999999988876540 000011 26899999999999999999886554
No 154
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.54 E-value=1.4e-14 Score=122.56 Aligned_cols=114 Identities=13% Similarity=0.202 Sum_probs=88.7
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEecccccc-ccCCCCeeEEEeCc
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMD-EFQTGSFDSVVDKG 121 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~-~~~~~~fD~v~~~~ 121 (207)
.++. +|||||||.|.++..|++.|. +|+|+|+++.+|+.|+...... .++.|.+.++.++. .+..++||+|++..
T Consensus 65 ~~~~-~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPL-NVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCC-EEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCC-eEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 3444 999999999999999999988 9999999999999999877543 47899999998862 34567999999999
Q ss_pred chhhhccCCCChhhHH--HHHHHHHHhcCCCcEEEEEEeCCccccccc
Q 028547 122 TLDSLLCGSNSRQNAT--QMLKEVWRVLKDKGVYILVTYGAPIYRLGM 167 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~--~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~ 167 (207)
+++|+ .+.. ..+..+.+.|+++|..++...........+
T Consensus 143 ~~ehv-------~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~~~~~ 183 (569)
T 4azs_A 143 VFHHI-------VHLHGIDEVKRLLSRLADVTQAVILELAVKEEPFYW 183 (569)
T ss_dssp CHHHH-------HHHHCHHHHHHHHHHHHHHSSEEEEECCCTTSSSGG
T ss_pred chhcC-------CCHHHHHHHHHHHHHhccccceeeEEeccccccccc
Confidence 99998 4443 223456667788777777665444444433
No 155
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.54 E-value=3.9e-14 Score=113.27 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=88.2
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcC-C-CcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDG-Y-EDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
+++.+|||+|||+|.++..++..+ . .+++|+|+++.+++.+++++... .++.|.+.|+.++ +.+...||+|+++.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~-~~~~~~~D~Ii~np 280 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL-PRFFPEVDRILANP 280 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG-GGTCCCCSEEEECC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC-ccccCCCCEEEECC
Confidence 344599999999999999999865 2 49999999999999999987633 3799999999998 45567799999988
Q ss_pred chhhhccC-CCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 122 TLDSLLCG-SNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 122 ~l~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
++...... .........+++.+.++|+|||.+++.+..
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 76532100 001123478899999999999999998743
No 156
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.54 E-value=3.6e-14 Score=104.91 Aligned_cols=97 Identities=11% Similarity=0.141 Sum_probs=81.2
Q ss_pred CcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 49 QRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
.+|||+|||+|.++..++... ..+++++|+++.+++.++++.... .++.+.+.|+.+.. +.++||+|+++..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVISRAF--- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEECSCS---
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEEecc---
Confidence 499999999999999998863 249999999999999999886532 46899999998873 4578999997642
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.....+++.+.++|+|||.+++...
T Consensus 142 --------~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 --------ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp --------SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred --------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3457899999999999999998763
No 157
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.54 E-value=1.9e-14 Score=108.04 Aligned_cols=117 Identities=14% Similarity=0.082 Sum_probs=79.2
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCC-HHHHHHH---HHHccC--CCCceEEEeccccccccC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDIS-SVVIEAM---MKKYSN--RPQLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s-~~~i~~~---~~~~~~--~~~~~~~~~d~~~~~~~~ 110 (207)
+++.....+.. +|||||||+|.++..+++... .+|+|+|+| +.+++.| +++... ..++.|.++|+.++....
T Consensus 16 ~~~~~~~~~~~-~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~ 94 (225)
T 3p2e_A 16 ELTEIIGQFDR-VHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL 94 (225)
T ss_dssp HHHHHHTTCSE-EEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG
T ss_pred HHHHHhCCCCC-EEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhc
Confidence 34444444444 999999999999999986533 489999999 6666665 665442 257999999998872112
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.+.+|.|+++.+......+ ...+...++++++++|||||.+++.+
T Consensus 95 ~d~v~~i~~~~~~~~~~~~--~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 95 KNIADSISILFPWGTLLEY--VIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp TTCEEEEEEESCCHHHHHH--HHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCeEEEEEEeCCCcHHhhh--hhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 3667777765432221000 00123568999999999999999844
No 158
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.53 E-value=1.1e-14 Score=108.57 Aligned_cols=111 Identities=16% Similarity=0.200 Sum_probs=80.6
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHH----cc--CCCCceEEEeccccccccC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKK----YS--NRPQLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~----~~--~~~~~~~~~~d~~~~~~~~ 110 (207)
..+..+..+++.+|||+|||+|.++..+++... .+|+|+|+++.+++.+.++ .. ..+++.++++|+.++ ++.
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l-~~~ 96 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL-PPL 96 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC-CSC
T ss_pred HHHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC-CCC
Confidence 344444344445999999999999999999852 4999999999988864322 21 225899999999997 566
Q ss_pred CCCeeEEEeCcc---h--hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 111 TGSFDSVVDKGT---L--DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 111 ~~~fD~v~~~~~---l--~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.+. |.|+.... . +++ .+...++++++++|||||.+++..
T Consensus 97 ~~~-d~v~~~~~~~~~~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 97 SGV-GELHVLMPWGSLLRGVL-------GSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CCE-EEEEEESCCHHHHHHHH-------TSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CCC-CEEEEEccchhhhhhhh-------ccHHHHHHHHHHHcCCCcEEEEEe
Confidence 555 76663221 1 133 344889999999999999999854
No 159
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.53 E-value=4e-14 Score=112.15 Aligned_cols=111 Identities=14% Similarity=0.066 Sum_probs=85.2
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CC--CceEEEecccccccc---CCCCeeEEEeCc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RP--QLKYIKMDVRQMDEF---QTGSFDSVVDKG 121 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~--~~~~~~~d~~~~~~~---~~~~fD~v~~~~ 121 (207)
.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++.. .. ++.+++.|+.+..+. ..++||+|+++.
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dP 233 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDP 233 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECC
T ss_pred CcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECC
Confidence 4999999999999999999887 999999999999999998752 22 489999999886321 156899999976
Q ss_pred chhhhccCC---CChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 122 TLDSLLCGS---NSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 122 ~l~~~~~~~---~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+........ ....+...+++.+.++|+|||.+++.....
T Consensus 234 P~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 234 PKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp CSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 532210000 012567889999999999999977766443
No 160
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.53 E-value=3.6e-14 Score=111.20 Aligned_cols=110 Identities=22% Similarity=0.278 Sum_probs=83.0
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHcc------CCCCceEEEecccccccc-CCCCeeEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYS------NRPQLKYIKMDVRQMDEF-QTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~------~~~~~~~~~~d~~~~~~~-~~~~fD~v 117 (207)
+.+.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++. ..++++++.+|+.+.... ..++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 344599999999999999999874 3599999999999999999873 236899999999886321 46789999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++....... .........+++++.++|+|||++++...
T Consensus 174 i~d~~~~~~---~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 174 IIDTTDPAG---PASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEECC------------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCCCccc---cchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 986544321 00001126889999999999999998753
No 161
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.53 E-value=7.4e-14 Score=104.44 Aligned_cols=121 Identities=14% Similarity=0.127 Sum_probs=94.6
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCC
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~ 112 (207)
.+.+..+.++.. +|+|+|||+|.++..+++.+. .+|+++|+++.+++.|++++... .++.+..+|+.+.. .+.+
T Consensus 12 L~~i~~~v~~g~-~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~-~~~~ 89 (230)
T 3lec_A 12 LQKVANYVPKGA-RLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF-EEAD 89 (230)
T ss_dssp HHHHHTTSCTTE-EEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGG
T ss_pred HHHHHHhCCCCC-EEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc-cccc
Confidence 344556666665 999999999999999999875 58999999999999999987632 36999999999873 2334
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCcccccccc
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPIYRLGML 168 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~ 168 (207)
.||+|+..++.. .....+++...+.|+++|.|++...........++
T Consensus 90 ~~D~IviaGmGg---------~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L 136 (230)
T 3lec_A 90 NIDTITICGMGG---------RLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWL 136 (230)
T ss_dssp CCCEEEEEEECH---------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHH
T ss_pred ccCEEEEeCCch---------HHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHH
Confidence 799988655433 45788899999999999999988765544444444
No 162
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.53 E-value=2.8e-14 Score=118.16 Aligned_cols=101 Identities=16% Similarity=0.187 Sum_probs=82.9
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
++.+|||+|||+|.++..+++.+..+|+++|+++ +++.+++++... .+++++.+|+.+. +++ ++||+|+++.++
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLP-EQVDIIISEPMG 234 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCS-SCEEEEECCCCH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC-ccC-CCeEEEEEeCch
Confidence 3459999999999999999987666999999998 888888876532 5799999999986 333 689999998877
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
+++ ..+.....+.++.++|+|||.+++
T Consensus 235 ~~~-----~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YML-----FNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHH-----TCHHHHHHHHHGGGGEEEEEEEES
T ss_pred Hhc-----CcHHHHHHHHHHHHhcCCCCEEEE
Confidence 765 334566777888999999999985
No 163
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.53 E-value=1.1e-13 Score=103.90 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=75.5
Q ss_pred CCCCcEEEEcCCCchhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc--CCCCeeEEEeCc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF--QTGSFDSVVDKG 121 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~fD~v~~~~ 121 (207)
+++.+|||+|||+|.++..+++. + ...|+++|+++.+++.+.+......|+.++++|+.....+ ..++||+|++..
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 34459999999999999999875 3 2499999999988655443333236899999999875321 246899999874
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
... .....+...+.+.|||||.|+++.
T Consensus 155 a~~---------~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 155 AQP---------DQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CCT---------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCh---------hHHHHHHHHHHHhCCCCeEEEEEE
Confidence 431 333444556667999999999874
No 164
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.53 E-value=5.7e-14 Score=114.36 Aligned_cols=113 Identities=8% Similarity=0.028 Sum_probs=84.6
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHH-------HHHccC----CCCceEEEeccc
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAM-------MKKYSN----RPQLKYIKMDVR 104 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~-------~~~~~~----~~~~~~~~~d~~ 104 (207)
..++..+...++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.| ++++.. ..++.++++|..
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 44555443444459999999999999999986 445899999999998888 666542 257888887544
Q ss_pred c-cccc--CCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 105 Q-MDEF--QTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 105 ~-~~~~--~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. ..++ ..++||+|+++..+. . .+....++++.++|+|||.+++..
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~l~-~-------~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNFLF-D-------EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCTTC-C-------HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccccCCCCEEEEeCccc-c-------ccHHHHHHHHHHhCCCCeEEEEee
Confidence 2 1111 246899999876553 2 577788999999999999999874
No 165
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.53 E-value=2e-14 Score=113.14 Aligned_cols=112 Identities=22% Similarity=0.211 Sum_probs=85.7
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC-------CCCceEEEeccccccccCCCCeeEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN-------RPQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
+.+++|||+|||+|.++..+++.. ..+++++|+++.+++.+++++.. .++++++.+|+.+..+...++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 344599999999999999999873 35999999999999999998642 3689999999988533456789999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
++....+....+.........+++.+.++|+|||++++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9875443200011011124789999999999999999875
No 166
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.53 E-value=2.2e-14 Score=110.92 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=83.1
Q ss_pred CCCCcEEEEcCCCchhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeC
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~ 120 (207)
.++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++... .++.+.++|+.+. ++.++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF--ISDQMYDAVIAD 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC--CCSCCEEEEEEC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc--CcCCCccEEEEc
Confidence 34459999999999999999986 2 249999999999999999987643 5799999999884 466789999973
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+ .+...+++++.++|+|||.+++.+...
T Consensus 187 -----~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 187 -----I-------PDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp -----C-------SCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred -----C-------cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 2 234678999999999999999988543
No 167
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.52 E-value=2.3e-14 Score=111.91 Aligned_cols=111 Identities=18% Similarity=0.311 Sum_probs=83.3
Q ss_pred CCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccccCCCCeeEEEe
Q 028547 47 HHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDEFQTGSFDSVVD 119 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD~v~~ 119 (207)
.+.+|||+|||+|.++..+++. +..+++++|+++.+++.+++++.. .++++++++|+.+..+...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 3459999999999999999987 346999999999999999998742 368999999998753345678999998
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
...-.++ +.........+++.+.++|+|||++++...+
T Consensus 170 d~~~~~~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 170 DSTDPTA--GQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EC------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cCCCccc--CchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 5432212 0001113478899999999999999997643
No 168
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=2.2e-14 Score=107.47 Aligned_cols=100 Identities=8% Similarity=0.063 Sum_probs=81.1
Q ss_pred CcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEecccccccc-CC----CCeeEEE
Q 028547 49 QRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEF-QT----GSFDSVV 118 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~-~~----~~fD~v~ 118 (207)
.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .++.++++|+.+..+. .. ++||+|+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~ 145 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIY 145 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEE
Confidence 499999999999999999862 249999999999999999987532 3599999999775221 11 7899999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+.... .....+++.+.++|+|||.+++...
T Consensus 146 ~~~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 146 IDADK----------ANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp ECSCG----------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ECCCH----------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 76432 4568899999999999999998664
No 169
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.52 E-value=6e-14 Score=111.25 Aligned_cols=102 Identities=12% Similarity=0.164 Sum_probs=86.3
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
.+|||+|||+|.++..+++... .+++++|+ +.+++.+++++.. ..++++..+|+.+. ++ ++||+|++..++|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE--VP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC--CC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC--CC-CCCCEEEEchhcc
Confidence 5999999999999999998743 48999999 9999999887652 24799999999873 34 6799999999999
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
++ +......+++++++.|+|||.+++.+..
T Consensus 245 ~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 245 DL-----DEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp GC-----CHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CC-----CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 87 4455669999999999999999998753
No 170
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.52 E-value=5.5e-14 Score=113.60 Aligned_cols=123 Identities=14% Similarity=0.094 Sum_probs=89.0
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccCCCCee
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD 115 (207)
...+..+..+. .+|||+|||+|.++..++..+. .|+++|+|+.+++.+++++... ...++.++|+.+..+...+.||
T Consensus 205 r~~l~~~~~~g-~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD 282 (393)
T 4dmg_A 205 RRLFEAMVRPG-ERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFH 282 (393)
T ss_dssp HHHHHTTCCTT-CEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEE
T ss_pred HHHHHHHhcCC-CeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCC
Confidence 44455444334 4999999999999999999887 5999999999999999987522 2346778999886322234499
Q ss_pred EEEeCcchhhhccC--CCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 116 SVVDKGTLDSLLCG--SNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 116 ~v~~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+|+++.+...-... .........+++.+.++|+|||.+++.+++..
T Consensus 283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 99987654210000 00014667889999999999999998887655
No 171
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.52 E-value=4.6e-14 Score=111.31 Aligned_cols=110 Identities=17% Similarity=0.311 Sum_probs=84.6
Q ss_pred CCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccccCCCCeeEEEe
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDEFQTGSFDSVVD 119 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD~v~~ 119 (207)
.+++|||+|||+|.++..+++.. ..+++++|+++.+++.+++++.. .++++++++|+.+..+...++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 34599999999999999999873 35999999999999999998764 367999999998753334678999998
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+.. +.+ +.........+++++.+.|+|||.+++...+
T Consensus 196 d~~-~p~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 196 DSS-DPI--GPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ECC-CSS--SGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCc-CCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 642 111 0000011278999999999999999997643
No 172
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.52 E-value=2.8e-14 Score=110.74 Aligned_cols=141 Identities=13% Similarity=0.120 Sum_probs=93.4
Q ss_pred hchhhhhcccCCceeeecCccCHHHHHHhhCC-CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC
Q 028547 14 WYWDNRYAHESGPFDWYQKYPSLAPLIKLYVP-SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 14 ~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~ 92 (207)
+||...+......+......+.+.+.+...+. ..+.+|||+|||+|.++..+++....+|+++|+|+.+++.++++...
T Consensus 89 ~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 89 EFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp EETTEEEECCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHH
T ss_pred EECCeEEEeCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 45555554444444332333333333322222 23349999999999999999988224999999999999999998763
Q ss_pred C--C-CceEEEeccccccccCCCCe---eEEEeCcchhhhcc----CC--C------ChhhHHHHHHHHH-HhcCCCcEE
Q 028547 93 R--P-QLKYIKMDVRQMDEFQTGSF---DSVVDKGTLDSLLC----GS--N------SRQNATQMLKEVW-RVLKDKGVY 153 (207)
Q Consensus 93 ~--~-~~~~~~~d~~~~~~~~~~~f---D~v~~~~~l~~~~~----~~--~------~~~~~~~~l~~~~-~~L~pgG~~ 153 (207)
. . ++.|+++|+.+.. + ++| |+|+++.++..... .. . +..+...+++++. +.|+|||.+
T Consensus 169 ~~l~~~v~~~~~D~~~~~--~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l 245 (284)
T 1nv8_A 169 HGVSDRFFVRKGEFLEPF--K-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIV 245 (284)
T ss_dssp TTCTTSEEEEESSTTGGG--G-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEE
T ss_pred cCCCCceEEEECcchhhc--c-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEE
Confidence 2 2 4999999998853 2 478 99999866543210 00 0 0012237899999 999999999
Q ss_pred EEEE
Q 028547 154 ILVT 157 (207)
Q Consensus 154 ~~~~ 157 (207)
++..
T Consensus 246 ~~e~ 249 (284)
T 1nv8_A 246 LMEI 249 (284)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9855
No 173
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.52 E-value=8e-14 Score=111.63 Aligned_cols=112 Identities=12% Similarity=0.175 Sum_probs=89.3
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCe
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~f 114 (207)
++..+...+..+|||+|||+|.++..+++... .+++++|+ +.+++.+++++... .++.++.+|+.+. ++. .|
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~-~~ 250 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP--LPR-KA 250 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC--CSS-CE
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC--CCC-Cc
Confidence 34443333445999999999999999998754 48999999 89999999876532 3799999999864 333 49
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
|+|++..+++++ +..+...+++++.++|+|||.+++.+..
T Consensus 251 D~v~~~~vl~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNW-----PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGS-----CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCC-----CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999999987 4445578999999999999999998765
No 174
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.52 E-value=2.3e-13 Score=100.15 Aligned_cols=89 Identities=18% Similarity=0.347 Sum_probs=71.8
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
.+.+|||+|||+|.++..+++.+..+++++|+++.+++.++++.. ++.++++|+.++ + ++||+|+++.+++++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~d~~~~-~---~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---GVNFMVADVSEI-S---GKYDTWIMNPPFGSV 123 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---TSEEEECCGGGC-C---CCEEEEEECCCC---
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---CCEEEECcHHHC-C---CCeeEEEECCCchhc
Confidence 334999999999999999998866579999999999999999875 789999999886 2 689999999999886
Q ss_pred ccCCCChhhHHHHHHHHHHhc
Q 028547 127 LCGSNSRQNATQMLKEVWRVL 147 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L 147 (207)
.......+++++.+.+
T Consensus 124 -----~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 124 -----VKHSDRAFIDKAFETS 139 (200)
T ss_dssp ---------CHHHHHHHHHHE
T ss_pred -----cCchhHHHHHHHHHhc
Confidence 1122356788888888
No 175
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.52 E-value=5.2e-14 Score=109.22 Aligned_cols=109 Identities=16% Similarity=0.257 Sum_probs=85.3
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccccCCCCeeEE
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
.+.+++|||+|||+|.++..+++.. ..+++++|+++.+++.+++++.. .++++++++|+.+..+...++||+|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 3344599999999999999999874 35999999999999999998763 3689999999988533346789999
Q ss_pred EeCcchhhhccCCCChhh--HHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQN--ATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++....... .... ...+++.+.+.|+|||++++...
T Consensus 156 i~d~~~~~~-----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 156 IVDSSDPIG-----PAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEECCCTTT-----GGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCC-----cchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 985432211 1122 27899999999999999998753
No 176
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.51 E-value=3.1e-14 Score=111.47 Aligned_cols=110 Identities=18% Similarity=0.206 Sum_probs=83.1
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccccCCCCeeEEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD~v~ 118 (207)
..+++|||+|||+|.++..+++.. ..+++++|+++.+++.+++++.. .++++++.+|+.+..+...++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 344599999999999999999874 35999999999999999998752 36899999999875334567899999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+....+.. .........+++++.++|+|||++++...
T Consensus 174 ~d~~~~~~---~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 174 TDSSDPMG---PAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EECC--------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCCCCCC---cchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 86443211 00112346789999999999999998763
No 177
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=4.7e-14 Score=105.55 Aligned_cols=101 Identities=12% Similarity=0.016 Sum_probs=80.9
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccc-cC---CCCeeEEE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDE-FQ---TGSFDSVV 118 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~-~~---~~~fD~v~ 118 (207)
+.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++... .++.++++|+.+..+ +. .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 3499999999999999999873 249999999999999999887522 359999999987522 11 26799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+.... .....+++.+.++|+|||.+++...
T Consensus 139 ~d~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 139 IDADK----------QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp ECSCG----------GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EcCCc----------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 87543 4557899999999999998888653
No 178
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.51 E-value=2.8e-14 Score=110.41 Aligned_cols=108 Identities=17% Similarity=0.265 Sum_probs=79.0
Q ss_pred HHHHHHhhCCC-CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceE-EEecccccc--ccCC
Q 028547 36 LAPLIKLYVPS-HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKY-IKMDVRQMD--EFQT 111 (207)
Q Consensus 36 ~~~~l~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~-~~~d~~~~~--~~~~ 111 (207)
+..++..+... .+.+|||+|||+|.++..+++.+..+|+++|+++.|++.+.++. +++.. ...++.... .++.
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~---~rv~~~~~~ni~~l~~~~l~~ 149 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD---DRVRSMEQYNFRYAEPVDFTE 149 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC---TTEEEECSCCGGGCCGGGCTT
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---cccceecccCceecchhhCCC
Confidence 45566655433 34599999999999999999987779999999999998855432 22222 223444331 1344
Q ss_pred CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 112 GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
.+||+|++...++++ ..++.+++++|+|||.+++.
T Consensus 150 ~~fD~v~~d~sf~sl----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 150 GLPSFASIDVSFISL----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCCSEEEECCSSSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred CCCCEEEEEeeHhhH----------HHHHHHHHHHcCcCCEEEEE
Confidence 469999988766654 77899999999999999987
No 179
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.51 E-value=1.3e-13 Score=102.86 Aligned_cols=120 Identities=14% Similarity=0.108 Sum_probs=92.1
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~ 113 (207)
+.+..+.++.. +|||+|||+|.++..+++.+. .+|+++|+++.+++.|++++... .++.+..+|..+..+ +.+.
T Consensus 7 ~~l~~~v~~g~-~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~-~~~~ 84 (225)
T 3kr9_A 7 ELVASFVSQGA-ILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE-ETDQ 84 (225)
T ss_dssp HHHHTTSCTTE-EEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC-GGGC
T ss_pred HHHHHhCCCCC-EEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc-cCcC
Confidence 44555666665 999999999999999999875 58999999999999999987632 368999999976522 1236
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCcccccccc
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPIYRLGML 168 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~ 168 (207)
||+|+..++-. .....+++...+.|+++|.+++...........++
T Consensus 85 ~D~IviaG~Gg---------~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L 130 (225)
T 3kr9_A 85 VSVITIAGMGG---------RLIARILEEGLGKLANVERLILQPNNREDDLRIWL 130 (225)
T ss_dssp CCEEEEEEECH---------HHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHH
T ss_pred CCEEEEcCCCh---------HHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHH
Confidence 99988654422 45688899999999999999987765444444444
No 180
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.51 E-value=5.7e-14 Score=108.57 Aligned_cols=111 Identities=18% Similarity=0.261 Sum_probs=85.7
Q ss_pred CCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHcc------CCCCceEEEeccccccccCCCCeeEEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYS------NRPQLKYIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~fD~v~ 118 (207)
..+++|||+|||+|.++..+++. +..+++++|+++.+++.+++++. ..++++++.+|+.+..+...++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 34459999999999999999987 44699999999999999999873 236899999999875333467899999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+..... . .....-....+++.+.++|+|||++++...+
T Consensus 154 ~d~~~~-~--~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEP-V--GPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSC-C--SCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCC-C--CcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 865432 1 1111113467899999999999999987543
No 181
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=5.1e-14 Score=107.50 Aligned_cols=109 Identities=13% Similarity=0.168 Sum_probs=86.7
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccCCCC
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~ 113 (207)
++......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++.. ..++.+...|+.+. +++.++
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~~ 166 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-ELEEAA 166 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-CCCTTC
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCCCCC
Confidence 444333344459999999999999999987 4 25999999999999999988642 36899999999887 466788
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
||+|++. . .+...+++++.++|+|||.+++.....
T Consensus 167 ~D~v~~~-----~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 167 YDGVALD-----L-------MEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp EEEEEEE-----S-------SCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred cCEEEEC-----C-------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 9999973 1 234578999999999999999987543
No 182
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.51 E-value=7.9e-14 Score=105.10 Aligned_cols=121 Identities=14% Similarity=0.048 Sum_probs=93.9
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCC
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~ 112 (207)
.+.+..++++.. +|||+|||+|.++..+++.+. .+|+++|+++.+++.|++++... .++.+..+|+.+.. .+.+
T Consensus 12 L~~i~~~v~~g~-~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~-~~~~ 89 (244)
T 3gnl_A 12 LEKVASYITKNE-RIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI-EKKD 89 (244)
T ss_dssp HHHHHTTCCSSE-EEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGG
T ss_pred HHHHHHhCCCCC-EEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc-Cccc
Confidence 344556666665 999999999999999999875 48999999999999999987632 35899999999873 2334
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCcccccccc
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPIYRLGML 168 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~ 168 (207)
+||+|++.++-. .....+++...+.|+++|.|++...........++
T Consensus 90 ~~D~IviagmGg---------~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L 136 (244)
T 3gnl_A 90 AIDTIVIAGMGG---------TLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWS 136 (244)
T ss_dssp CCCEEEEEEECH---------HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHH
T ss_pred cccEEEEeCCch---------HHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHH
Confidence 699988654433 45788899999999999999988765544444444
No 183
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.50 E-value=3.9e-14 Score=113.51 Aligned_cols=101 Identities=17% Similarity=0.192 Sum_probs=80.0
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
+++|||||||+|.++..+++.|.++|+++|.++ +++.|++.+... .++.++++++.++. ++ ++||+|++..+-.
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~-lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE-LP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec-CC-ccccEEEeecccc
Confidence 349999999999999999999988999999986 778887765522 46999999999983 34 7899999843222
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
.+ ..+.....++....++|+|||.++-
T Consensus 161 ~l----~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GL----LHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TB----TTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cc----cccchhhhHHHHHHhhCCCCceECC
Confidence 21 2335778888889999999999875
No 184
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.50 E-value=7e-14 Score=102.41 Aligned_cols=115 Identities=15% Similarity=0.293 Sum_probs=81.0
Q ss_pred HHHHHHhhC-CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc------
Q 028547 36 LAPLIKLYV-PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE------ 108 (207)
Q Consensus 36 ~~~~l~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~------ 108 (207)
+.++++.+. .+++.+|||+|||+|.++..+++.+. +|+|+|+++. ...+++.++++|+.+...
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~~~-~V~gvD~~~~---------~~~~~v~~~~~D~~~~~~~~~~~~ 82 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLAR-KIISIDLQEM---------EEIAGVRFIRCDIFKETIFDDIDR 82 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTTCS-EEEEEESSCC---------CCCTTCEEEECCTTSSSHHHHHHH
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHcCC-cEEEEecccc---------ccCCCeEEEEccccCHHHHHHHHH
Confidence 345555442 23345999999999999999999844 9999999873 122589999999988521
Q ss_pred -cC---CCCeeEEEeCcchhhhccCCC------ChhhHHHHHHHHHHhcCCCcEEEEEEeCCcc
Q 028547 109 -FQ---TGSFDSVVDKGTLDSLLCGSN------SRQNATQMLKEVWRVLKDKGVYILVTYGAPI 162 (207)
Q Consensus 109 -~~---~~~fD~v~~~~~l~~~~~~~~------~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~ 162 (207)
+. .++||+|+++...... +.. .......+++.+.++|+|||.|++..+..+.
T Consensus 83 ~~~~~~~~~~D~Vlsd~~~~~~--g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 83 ALREEGIEKVDDVVSDAMAKVS--GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp HHHHHTCSSEEEEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred HhhcccCCcceEEecCCCcCCC--CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 11 1489999997643211 000 0123467888899999999999998886654
No 185
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.50 E-value=1.8e-13 Score=109.16 Aligned_cols=110 Identities=16% Similarity=0.152 Sum_probs=83.0
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccCCCC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~ 113 (207)
.++..+..+...+|||+|||+|.++..+++... .+++++|+ +.++. +++... ..+++|..+|+.+. .+ +
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~--~p--~ 247 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE--VP--H 247 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC--CC--C
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC--CC--C
Confidence 344444333445999999999999999998754 38899999 44444 333221 24799999999843 44 8
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
||+|++..++|++ +..+...++++++++|+|||.+++.+..
T Consensus 248 ~D~v~~~~vlh~~-----~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 248 ADVHVLKRILHNW-----GDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp CSEEEEESCGGGS-----CHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred CcEEEEehhccCC-----CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9999999999988 4445589999999999999999998753
No 186
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.50 E-value=2.1e-13 Score=100.29 Aligned_cols=115 Identities=15% Similarity=0.296 Sum_probs=80.2
Q ss_pred HHHHHHhhC-CCCCCcEEEEcCCCchhhHHHHhcCC---CcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc----
Q 028547 36 LAPLIKLYV-PSHHQRILIVGCGNSAFSEGMVDDGY---EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD---- 107 (207)
Q Consensus 36 ~~~~l~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~---~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~---- 107 (207)
+.++++.+. .+++.+|||+|||+|.++..+++... .+|+|+|+++.. ...++.++++|+.+..
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~~~~v~~~~~d~~~~~~~~~ 80 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------PIPNVYFIQGEIGKDNMNNI 80 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------CCTTCEEEECCTTTTSSCCC
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------CCCCceEEEccccchhhhhh
Confidence 344454442 23334999999999999999988632 489999999831 1257899999998762
Q ss_pred --------------------ccCCCCeeEEEeCcchhhhccCCCChh------hHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 108 --------------------EFQTGSFDSVVDKGTLDSLLCGSNSRQ------NATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 108 --------------------~~~~~~fD~v~~~~~l~~~~~~~~~~~------~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
.++.++||+|+++..+++. +....+ ....+++++.++|+|||.+++..+...
T Consensus 81 ~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~--g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 81 KNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCI--GNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp -----------CHHHHHHHHHHTTCCEEEEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred ccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCC--CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 0456799999998766542 000001 123478999999999999999776543
No 187
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.49 E-value=6.2e-14 Score=110.18 Aligned_cols=109 Identities=19% Similarity=0.324 Sum_probs=81.2
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccccCCCCeeEEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD~v~ 118 (207)
..+++|||||||+|..+..+++.. ..+++++|+++.+++.+++++.. .++++++.+|+.+..+...++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 344599999999999999999874 35999999999999999998863 35799999999885333567899999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+... +++ +.........+++.+.++|+|||++++..
T Consensus 187 ~d~~-~~~--~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPV--GPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC----------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCC--CcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8653 222 00001122789999999999999999865
No 188
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.49 E-value=3.8e-14 Score=113.45 Aligned_cols=106 Identities=20% Similarity=0.313 Sum_probs=80.7
Q ss_pred HHHHHHhhCCCCCCcEEEEcCC------CchhhHHHHhc--CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc
Q 028547 36 LAPLIKLYVPSHHQRILIVGCG------NSAFSEGMVDD--GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD 107 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G------~G~~~~~l~~~--~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~ 107 (207)
+..++..+..+.. +||||||| +|..+..+++. ...+|+|+|+++.+. ....+++|+++|+.++
T Consensus 206 Ye~lL~~l~~~~~-rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~~~rI~fv~GDa~dl- 276 (419)
T 3sso_A 206 YDRHFRDYRNQQV-RVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VDELRIRTIQGDQNDA- 276 (419)
T ss_dssp HHHHHGGGTTSCC-EEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GCBTTEEEEECCTTCH-
T ss_pred HHHHHHhhcCCCC-EEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hcCCCcEEEEeccccc-
Confidence 3445555544444 99999999 66666666654 225999999999862 1236899999999987
Q ss_pred ccC------CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 108 EFQ------TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 108 ~~~------~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++. .++||+|++... ++. .+....+++++++|||||++++.+.
T Consensus 277 pf~~~l~~~d~sFDlVisdgs-H~~-------~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 277 EFLDRIARRYGPFDIVIDDGS-HIN-------AHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp HHHHHHHHHHCCEEEEEECSC-CCH-------HHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred chhhhhhcccCCccEEEECCc-ccc-------hhHHHHHHHHHHhcCCCeEEEEEec
Confidence 454 689999999754 444 7889999999999999999999764
No 189
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.49 E-value=1.4e-13 Score=105.00 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=84.8
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccC--CC-CceEEEeccccccccCCC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSN--RP-QLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~--~~-~~~~~~~d~~~~~~~~~~ 112 (207)
.++......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++.. .. ++.+.+.|+.+. ++.+
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~ 161 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEE 161 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCC
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCC
Confidence 3344433344459999999999999999988 4 35999999999999999998752 23 499999999975 5678
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+||+|+++. .+...+++++.++|+|||.+++...
T Consensus 162 ~~D~v~~~~------------~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 162 NVDHVILDL------------PQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp SEEEEEECS------------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CcCEEEECC------------CCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 899999742 2335679999999999999998764
No 190
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.49 E-value=1.6e-13 Score=110.22 Aligned_cols=98 Identities=22% Similarity=0.272 Sum_probs=81.6
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
.+|||+|||+|.++..+++..+ .+++++|+ +.+++.++++ .+++|+.+|+.+. ++.. |+|++..++|++
T Consensus 205 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~~--~p~~--D~v~~~~vlh~~- 274 (368)
T 3reo_A 205 TTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----SGVEHLGGDMFDG--VPKG--DAIFIKWICHDW- 274 (368)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTTC--CCCC--SEEEEESCGGGB-
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----CCCEEEecCCCCC--CCCC--CEEEEechhhcC-
Confidence 5999999999999999998754 48999999 8777665432 5899999999873 4543 999999999987
Q ss_pred cCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 128 CGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 128 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+..+...+++++++.|+|||.+++.+...
T Consensus 275 ----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 275 ----SDEHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp ----CHHHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred ----CHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 55667799999999999999999987543
No 191
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.49 E-value=1.1e-13 Score=109.55 Aligned_cols=109 Identities=17% Similarity=0.326 Sum_probs=83.7
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccc-cCCCCeeEE
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDE-FQTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~-~~~~~fD~v 117 (207)
..+++|||||||+|.++..+++.. ..+|+++|+++.+++.+++++.. .++++++++|+.+..+ .+.++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 344599999999999999999874 35999999999999999998752 3689999999987522 345789999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
++...-. . +.........+++.+.++|+|||.+++..
T Consensus 199 i~d~~~p-~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDP-I--GPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCT-T--SGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCc-c--CcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9864311 1 00011125789999999999999999863
No 192
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=6.9e-14 Score=107.96 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=82.9
Q ss_pred CcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 49 QRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
.+|||+|||+|.++..+++.. ..+|+++|+++.+++.+++++... .++.++++|+.+. +. .++||+|++..+.
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGYVH-- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECCCS--
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECCcc--
Confidence 499999999999999999874 359999999999999999987632 5789999999987 54 6789999987653
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
....++..+.+.|+|||.+++..+..
T Consensus 197 ---------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ---------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ---------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 33557888999999999999877543
No 193
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=5.1e-14 Score=106.10 Aligned_cols=100 Identities=14% Similarity=0.110 Sum_probs=82.2
Q ss_pred CCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccC--CCCeeEEEeCc
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQ--TGSFDSVVDKG 121 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~--~~~fD~v~~~~ 121 (207)
+.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .++.++++|+.+..+.. .++||+|++..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 3499999999999999999874 249999999999999999987532 36899999998853333 57899999865
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.. .+...+++.+.++|+|||.+++.+
T Consensus 135 ~~----------~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 135 AK----------GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GG----------SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CH----------HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 43 355789999999999999999875
No 194
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.49 E-value=1.6e-13 Score=106.34 Aligned_cols=108 Identities=18% Similarity=0.295 Sum_probs=82.8
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc------------CCCCceEEEeccccccccCCCCe
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS------------NRPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~------------~~~~~~~~~~d~~~~~~~~~~~f 114 (207)
.+++|||+|||+|.++..+++.+..+++++|+++.+++.+++++. ..++++++.+|+.+..+. .++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 345999999999999999998854699999999999999999871 125789999998875333 6789
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+|++....+ . +.........+++.+.++|+|||++++...
T Consensus 154 D~Ii~d~~~~-~--~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 154 DVIIADSTDP-V--GPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEECCCC-C-------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCCCC-C--CcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9999865422 1 000111247889999999999999998753
No 195
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.48 E-value=3.8e-14 Score=105.14 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=79.5
Q ss_pred CcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 49 QRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .+++++++|+.+..+...+ ||+|++...
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~- 135 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD- 135 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT-
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC-
Confidence 499999999999999998863 249999999999999999876532 3689999999875333345 999997632
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..+...+++++.++|+|||.+++..
T Consensus 136 ---------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 136 ---------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ---------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred ---------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 1456889999999999999998854
No 196
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.48 E-value=2.1e-13 Score=109.45 Aligned_cols=99 Identities=24% Similarity=0.276 Sum_probs=82.2
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
...+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++ ..+++|+.+|+.+ +++.+ |+|++..++|+
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~D~~~--~~p~~--D~v~~~~vlh~ 271 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----FPGVTHVGGDMFK--EVPSG--DTILMKWILHD 271 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT--CCCCC--SEEEEESCGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----cCCeEEEeCCcCC--CCCCC--CEEEehHHhcc
Confidence 335999999999999999998754 48999999 777766543 2589999999987 34544 99999999998
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+ +.++...+++++++.|+|||.+++.+..
T Consensus 272 ~-----~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 272 W-----SDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp S-----CHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred C-----CHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 7 5567789999999999999999998754
No 197
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.48 E-value=5.8e-14 Score=106.89 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=81.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEecccccccc------CCCCeeE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEF------QTGSFDS 116 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~------~~~~fD~ 116 (207)
+++|||+|||+|..+..+++.. ..+++++|+++.+++.+++++... .+++++.+|+.+..+. ..++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 3499999999999999998862 249999999999999999987532 4689999999875322 1578999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|++.... .....+++.+.++|+|||++++..
T Consensus 160 V~~d~~~----------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 160 IFVDADK----------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEECSCS----------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEcCch----------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 9976431 456889999999999999998865
No 198
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.48 E-value=1.8e-13 Score=108.65 Aligned_cols=110 Identities=16% Similarity=0.239 Sum_probs=81.8
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHHHHHHHHHHccC-------------CCCceEEEec
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSVVIEAMMKKYSN-------------RPQLKYIKMD 102 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~i~~~~~~~~~-------------~~~~~~~~~d 102 (207)
.++..+...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.+++++.. ..++.+..+|
T Consensus 96 ~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 96 MILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence 3444443444459999999999999999987 54 5999999999999999998652 2579999999
Q ss_pred ccccc-ccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 103 VRQMD-EFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 103 ~~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+.+.. +++.++||+|++...-. ..+++++.++|+|||.+++....
T Consensus 176 ~~~~~~~~~~~~fD~V~~~~~~~------------~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 176 ISGATEDIKSLTFDAVALDMLNP------------HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp TTCCC-------EEEEEECSSST------------TTTHHHHGGGEEEEEEEEEEESS
T ss_pred hHHcccccCCCCeeEEEECCCCH------------HHHHHHHHHhcCCCcEEEEEeCC
Confidence 98863 34567899999853211 23789999999999999987643
No 199
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.48 E-value=3.4e-13 Score=106.19 Aligned_cols=115 Identities=10% Similarity=0.059 Sum_probs=86.4
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCeeEEEeC
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~ 120 (207)
.+++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++.. ..++.+++.|+.+.. ...++||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~-~~~~~fD~Il~d 194 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG-ELNVEFDKILLD 194 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG-GGCCCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc-cccccCCEEEEe
Confidence 3444599999999999999999863 24899999999999999998752 257899999999873 345689999986
Q ss_pred cchhhhcc-CCC-------Ch-------hhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 121 GTLDSLLC-GSN-------SR-------QNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 121 ~~l~~~~~-~~~-------~~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.+...... ... .. .....+++++.++|+|||.+++++++.
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 55332210 000 11 123689999999999999999988643
No 200
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.48 E-value=9.4e-14 Score=107.39 Aligned_cols=109 Identities=19% Similarity=0.229 Sum_probs=85.8
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccC-----CCCceEEEeccccccccC
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSN-----RPQLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~-----~~~~~~~~~d~~~~~~~~ 110 (207)
.++......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.+++++.. ..++.+.+.|+.+. +++
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~ 168 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELP 168 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCC
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCC
Confidence 3444433344459999999999999999985 3 24999999999999999988642 25899999999887 456
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
.++||+|++.. .+...+++++.++|+|||.+++.+..
T Consensus 169 ~~~~D~v~~~~------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 169 DGSVDRAVLDM------------LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp TTCEEEEEEES------------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCceeEEEECC------------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 78899999732 23346899999999999999998754
No 201
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.48 E-value=1.9e-13 Score=105.60 Aligned_cols=116 Identities=15% Similarity=0.184 Sum_probs=86.2
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhc--CCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEecccccccc---CCCCeeEE
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDD--GYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEF---QTGSFDSV 117 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~---~~~~fD~v 117 (207)
.+++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++... .++.+++.|+.+.... ..++||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 344459999999999999999884 3259999999999999999987632 4899999999886321 25789999
Q ss_pred EeCcchhhhccCC----C-------ChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 118 VDKGTLDSLLCGS----N-------SRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 118 ~~~~~l~~~~~~~----~-------~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
++..+........ . .......+++.+.++|+|||.+++.+++.
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 9875543221000 0 01345789999999999999999988643
No 202
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.48 E-value=1.4e-13 Score=111.63 Aligned_cols=124 Identities=17% Similarity=0.124 Sum_probs=92.2
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--C-CceEEEecccccccc---C
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--P-QLKYIKMDVRQMDEF---Q 110 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~-~~~~~~~d~~~~~~~---~ 110 (207)
...+..+..+. .+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++... . ++.|+++|+.+..+. .
T Consensus 208 ~~~~~~~~~~~-~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~ 286 (396)
T 2as0_A 208 RLALEKWVQPG-DRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK 286 (396)
T ss_dssp HHHHGGGCCTT-CEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHhhCC-CeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh
Confidence 34454443233 499999999999999999987669999999999999999987632 2 789999999876321 2
Q ss_pred CCCeeEEEeCcchhhhccC--CCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 111 TGSFDSVVDKGTLDSLLCG--SNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
..+||+|++..+....... .........++..+.++|+|||.+++.+++..
T Consensus 287 ~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 287 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 5789999987554221000 00015677889999999999999999886554
No 203
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.48 E-value=7.5e-14 Score=104.84 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=80.3
Q ss_pred CCCcEEEEcCCCchhhHHHHhc-CC------CcEEEEeCCHHHHHHHHHHccC-------CCCceEEEeccccccccCCC
Q 028547 47 HHQRILIVGCGNSAFSEGMVDD-GY------EDVVNVDISSVVIEAMMKKYSN-------RPQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~-~~------~~v~~~D~s~~~i~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~ 112 (207)
++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.+++++.. ..++.+...|+.+..+ ..+
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 162 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP-PNA 162 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-GGC
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC-cCC
Confidence 3349999999999999998884 21 3899999999999999987653 2478999999987421 237
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
+||+|++...++++ .+++.+.|+|||.+++....
T Consensus 163 ~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 163 PYNAIHVGAAAPDT-------------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SEEEEEECSCBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred CccEEEECCchHHH-------------HHHHHHHhcCCCEEEEEEec
Confidence 89999999888766 37789999999999987743
No 204
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.48 E-value=9.3e-14 Score=112.24 Aligned_cols=123 Identities=13% Similarity=0.120 Sum_probs=91.3
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--C--CceEEEecccccccc---C
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--P--QLKYIKMDVRQMDEF---Q 110 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~--~~~~~~~d~~~~~~~---~ 110 (207)
.++...+.+ +.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++... . +++|+++|+.+..+. .
T Consensus 204 ~~~~~~~~~-~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~ 282 (385)
T 2b78_A 204 NELINGSAA-GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH 282 (385)
T ss_dssp HHHHHTTTB-TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHhcC-CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh
Confidence 444444333 3499999999999999999977669999999999999999987632 3 799999999875221 2
Q ss_pred CCCeeEEEeCcchhhhc--cCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 111 TGSFDSVVDKGTLDSLL--CGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~--~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
..+||+|++..+..... ...........+++.+.++|+|||.+++...+..
T Consensus 283 ~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 283 HLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp TCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 45899999976653210 1111224667788899999999999998876554
No 205
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.48 E-value=8.5e-14 Score=103.52 Aligned_cols=86 Identities=23% Similarity=0.313 Sum_probs=74.1
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhcc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLC 128 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~ 128 (207)
.+|||+|||+|.++..++ .+++++|+++. ++.+.++|+.+. +++.++||+|++..++++
T Consensus 69 ~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~-------------~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~--- 127 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR----NPVHCFDLASL-------------DPRVTVCDMAQV-PLEDESVDVAVFCLSLMG--- 127 (215)
T ss_dssp SCEEEETCTTCHHHHHCC----SCEEEEESSCS-------------STTEEESCTTSC-SCCTTCEEEEEEESCCCS---
T ss_pred CeEEEECCcCCHHHHHhh----ccEEEEeCCCC-------------CceEEEeccccC-CCCCCCEeEEEEehhccc---
Confidence 499999999999988773 38999999986 568899999886 577889999999888863
Q ss_pred CCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 129 GSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 129 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.+...+++++.++|+|||.+++.++..
T Consensus 128 -----~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 128 -----TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp -----SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred -----cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 578899999999999999999987543
No 206
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.47 E-value=1.6e-13 Score=118.45 Aligned_cols=122 Identities=12% Similarity=0.076 Sum_probs=92.4
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC----CCceEEEeccccccccCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR----PQLKYIKMDVRQMDEFQT 111 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~----~~~~~~~~d~~~~~~~~~ 111 (207)
....+..+. + +++|||+|||+|.++..++..+..+|+++|+|+.+++.+++++... .++.++++|+.+..+...
T Consensus 530 ~r~~l~~~~-~-g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~ 607 (703)
T 3v97_A 530 ARRMLGQMS-K-GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREAN 607 (703)
T ss_dssp HHHHHHHHC-T-TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCC
T ss_pred HHHHHHHhc-C-CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcC
Confidence 344444443 3 3499999999999999999987767999999999999999987622 369999999998644456
Q ss_pred CCeeEEEeCcchhhhcc----CCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 112 GSFDSVVDKGTLDSLLC----GSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~~----~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
++||+|+++.+...-.. ......+...+++.+.++|+|||.+++.+..
T Consensus 608 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 608 EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 78999999765421100 0011257888999999999999999987744
No 207
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.47 E-value=1.4e-14 Score=109.98 Aligned_cols=101 Identities=12% Similarity=0.053 Sum_probs=81.8
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccC-----CCCeeEE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQ-----TGSFDSV 117 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~-----~~~fD~v 117 (207)
+++|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .+++++++|+.+..+.. .++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 3499999999999999999852 249999999999999988887532 47999999998753322 4789999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++.... .....+++++.++|+|||++++...
T Consensus 141 ~~d~~~----------~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 141 FIDADK----------TNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEESCG----------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEcCCh----------HHhHHHHHHHHHhcCCCeEEEEECC
Confidence 976442 4567789999999999999998653
No 208
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.46 E-value=1.1e-12 Score=96.97 Aligned_cols=96 Identities=17% Similarity=0.309 Sum_probs=77.3
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCC-CceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRP-QLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++..... ++.++++|+.+. + .+||+|+++.+++.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-N---SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-C---CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc-C---CCCCEEEEcCCCcc
Confidence 345999999999999999999876689999999999999999876432 789999999886 2 48999999988776
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEE
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVY 153 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~ 153 (207)
. .......+++.+.+++ |+.+
T Consensus 125 ~-----~~~~~~~~l~~~~~~l--~~~~ 145 (207)
T 1wy7_A 125 Q-----RKHADRPFLLKAFEIS--DVVY 145 (207)
T ss_dssp S-----STTTTHHHHHHHHHHC--SEEE
T ss_pred c-----cCCchHHHHHHHHHhc--CcEE
Confidence 4 2233456788888888 4444
No 209
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.46 E-value=1.8e-13 Score=110.17 Aligned_cols=97 Identities=19% Similarity=0.219 Sum_probs=80.2
Q ss_pred CCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
..+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++. ++++++.+|+.+. ++. ||+|++..++|++
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~~--~~~--~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----SGIEHVGGDMFAS--VPQ--GDAMILKAVCHNW 280 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTTC--CCC--EEEEEEESSGGGS
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----CCCEEEeCCcccC--CCC--CCEEEEecccccC
Confidence 34999999999999999998864 37888899 8888766542 5799999999873 443 9999999999988
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+......++++++++|+|||.+++.++
T Consensus 281 -----~d~~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 281 -----SDEKCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp -----CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 333445999999999999999999864
No 210
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=3.7e-13 Score=105.29 Aligned_cols=108 Identities=16% Similarity=0.192 Sum_probs=84.4
Q ss_pred cEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEecccccc-ccCCCCeeEEEeCcchhh
Q 028547 50 RILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMD-EFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~-~~~~~~fD~v~~~~~l~~ 125 (207)
+|||||||+|.++..+++. ...+++++|+++.+++.+++++.. .++++++++|+.+.. ..+.++||+|++....+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~ 171 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGA 171 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCcc
Confidence 9999999999999999984 224899999999999999999863 368999999998863 234678999998643221
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.....-....+++.++++|+|||++++...+.
T Consensus 172 ---~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 172 ---ITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp ---CCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ---ccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 01111234789999999999999999877543
No 211
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.45 E-value=1.5e-12 Score=104.09 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=86.8
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
...+|+|+|||+|.++..+++..+ .+++..|. +.+++.++++.... .+++|+.+|+.+. +. ..+|+|++..++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~-~~--~~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD-PL--PEADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS-CC--CCCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC-CC--CCceEEEeeeec
Confidence 334999999999999999999865 37888886 78999999887632 6899999999875 33 357999999999
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
|.+ +.++...+|+++++.|+|||.+++....
T Consensus 255 h~~-----~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 255 HDW-----ADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp GGS-----CHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ccC-----CHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 987 5566788999999999999999998853
No 212
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.45 E-value=2.1e-13 Score=105.08 Aligned_cols=107 Identities=9% Similarity=0.106 Sum_probs=85.3
Q ss_pred HHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCee
Q 028547 39 LIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 39 ~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD 115 (207)
.+.....+.. +|||+|||+|.++..+++.+.++|+++|+++.+++.+++++... .++.++++|+.++. ..+.||
T Consensus 118 ri~~~~~~g~-~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~--~~~~~D 194 (278)
T 3k6r_A 118 RMAKVAKPDE-LVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GENIAD 194 (278)
T ss_dssp HHHHHCCTTC-EEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCSCEE
T ss_pred HHHHhcCCCC-EEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc--cccCCC
Confidence 3444445555 99999999999999999988679999999999999999987632 46899999999873 567899
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
.|+++.+... ..++..+.++|++||++.+..+.
T Consensus 195 ~Vi~~~p~~~-----------~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 195 RILMGYVVRT-----------HEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEECCCSSG-----------GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCCCcH-----------HHHHHHHHHHcCCCCEEEEEeee
Confidence 9998755432 34567778999999998776543
No 213
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.45 E-value=4.1e-13 Score=102.74 Aligned_cols=108 Identities=14% Similarity=0.171 Sum_probs=82.9
Q ss_pred CcEEEEcCCC--chhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccc-----cCCCCee--
Q 028547 49 QRILIVGCGN--SAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDE-----FQTGSFD-- 115 (207)
Q Consensus 49 ~~vLdiG~G~--G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~-----~~~~~fD-- 115 (207)
.+|||||||. +.++..+++. . ..+|+++|.|+.+++.+++++... .++.|++.|+.+... ...+.||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcC
Confidence 5899999997 4444544442 2 249999999999999999988753 368999999988521 1124455
Q ss_pred ---EEEeCcchhhhccCCCChh-hHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 116 ---SVVDKGTLDSLLCGSNSRQ-NATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 116 ---~v~~~~~l~~~~~~~~~~~-~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
.|+++.++||+ +.. ++..+++++++.|+|||.|++.++..+
T Consensus 160 ~p~av~~~avLH~l-----~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 160 RPVALTVIAIVHFV-----LDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp SCCEEEEESCGGGS-----CGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcchHHhhhhHhcC-----CchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 68899999998 222 268899999999999999999987654
No 214
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.45 E-value=1.8e-13 Score=104.89 Aligned_cols=97 Identities=13% Similarity=0.201 Sum_probs=79.7
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC------CCCceEEEeccccccccCCCCeeEEE
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN------RPQLKYIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD~v~ 118 (207)
...+++|||+|||+|.++..+++.+ .+++++|+++.+++.+++++.. .++++++.+|+.+.. ++||+|+
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii 144 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIF 144 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEE
Confidence 3444599999999999999998876 7999999999999999887643 357899999998862 7899999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+.. .++..+++.+.+.|+|||++++...
T Consensus 145 ~d~------------~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 145 CLQ------------EPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp ESS------------CCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ECC------------CChHHHHHHHHHhcCCCcEEEEEcC
Confidence 762 1223489999999999999998653
No 215
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.44 E-value=8.1e-14 Score=105.39 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=76.1
Q ss_pred CcEEEEcCCCchhhHHHHhc----CC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc--cccC-CCCeeEEEeC
Q 028547 49 QRILIVGCGNSAFSEGMVDD----GY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM--DEFQ-TGSFDSVVDK 120 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~----~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~--~~~~-~~~fD~v~~~ 120 (207)
.+|||||||+|..+..+++. +. .+|+++|+++.+++.++. . ..+++++++|+.+. .+.. ..+||+|++.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~--~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D--MENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G--CTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c--CCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 49999999999999999886 32 499999999999887763 2 25899999999884 2333 3479999975
Q ss_pred cchhhhccCCCChhhHHHHHHHHHH-hcCCCcEEEEEE
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWR-VLKDKGVYILVT 157 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~-~L~pgG~~~~~~ 157 (207)
.. + .+...++.++.+ +|+|||.+++..
T Consensus 160 ~~-~---------~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 160 NA-H---------ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SS-C---------SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred Cc-h---------HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 43 1 256779999997 999999999964
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.44 E-value=2.2e-13 Score=103.07 Aligned_cols=100 Identities=12% Similarity=0.106 Sum_probs=80.9
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccc-c-----CCCCeeE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDE-F-----QTGSFDS 116 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~-~-----~~~~fD~ 116 (207)
+++|||+|||+|..+..+++.. ..+++++|+++.+++.+++++... .+++++.+|+.+..+ + ..++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 3499999999999999998862 249999999999999999987532 368999999887522 2 1578999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|++... ......+++.+.++|+|||++++..
T Consensus 151 I~~d~~----------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDAD----------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECSC----------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCc----------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 997633 2456889999999999999998865
No 217
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.44 E-value=3e-13 Score=102.35 Aligned_cols=100 Identities=15% Similarity=0.111 Sum_probs=80.5
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccc--------------
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDE-------------- 108 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~-------------- 108 (207)
+.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .++.+..+|+.+..+
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 3499999999999999999873 249999999999999999987532 248999999876422
Q ss_pred cC-C-CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 109 FQ-T-GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 109 ~~-~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
++ . ++||+|++.... .....+++.+.++|+|||.+++..
T Consensus 141 f~~~~~~fD~I~~~~~~----------~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADK----------ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCG----------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCH----------HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 11 2 789999987443 455788999999999999999876
No 218
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.43 E-value=4.8e-13 Score=108.53 Aligned_cols=123 Identities=14% Similarity=0.152 Sum_probs=92.2
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---C-CceEEEecccccccc---
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---P-QLKYIKMDVRQMDEF--- 109 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~-~~~~~~~d~~~~~~~--- 109 (207)
...+..+ . .+.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++... . ++.|+++|+.+..+.
T Consensus 212 ~~~l~~~-~-~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~ 289 (396)
T 3c0k_A 212 RLATRRY-V-ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD 289 (396)
T ss_dssp HHHHHHH-C-TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHh-h-CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh
Confidence 3444444 3 33499999999999999999987669999999999999999987622 2 789999999886321
Q ss_pred CCCCeeEEEeCcchhhhccC--CCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 110 QTGSFDSVVDKGTLDSLLCG--SNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 110 ~~~~fD~v~~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
...+||+|++..+....... .........++..+.+.|+|||.+++.+.+..
T Consensus 290 ~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 290 RGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp TTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred cCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 14689999998654321000 01125678899999999999999999876544
No 219
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.43 E-value=1.5e-13 Score=103.60 Aligned_cols=107 Identities=15% Similarity=0.245 Sum_probs=72.1
Q ss_pred HHHHHHhhCCC-CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-----CCceEEEecccccccc
Q 028547 36 LAPLIKLYVPS-HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-----PQLKYIKMDVRQMDEF 109 (207)
Q Consensus 36 ~~~~l~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-----~~~~~~~~d~~~~~~~ 109 (207)
+..++..+... .+++|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++.... .++.+...+ .+
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~-----~~ 99 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLA-----DF 99 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGG-----GC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHh-----Hc
Confidence 45566655433 33599999999999999999997669999999999999987754321 122222211 11
Q ss_pred CCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 110 QTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 110 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
....||.+.+..++..+ ..++++++++|+|||.+++..
T Consensus 100 ~~~~~d~~~~D~v~~~l----------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 100 EQGRPSFTSIDVSFISL----------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CSCCCSEEEECCSSSCG----------GGTHHHHHHHSCTTCEEEEEE
T ss_pred CcCCCCEEEEEEEhhhH----------HHHHHHHHHhccCCCEEEEEE
Confidence 11124544444333322 668999999999999999863
No 220
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.43 E-value=8.7e-13 Score=100.04 Aligned_cols=100 Identities=14% Similarity=0.224 Sum_probs=81.3
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++.... .++.+...|+.+.. .+.++||+|++..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~- 166 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVDV- 166 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEECS-
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEECC-
Confidence 34459999999999999999988 449999999999999999886532 57899999998852 2567899999742
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
.+...+++++.++|+|||.+++....
T Consensus 167 -----------~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 167 -----------REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp -----------SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred -----------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 23356789999999999999998853
No 221
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.42 E-value=5.4e-13 Score=103.12 Aligned_cols=100 Identities=15% Similarity=0.237 Sum_probs=81.9
Q ss_pred CCCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeC
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~ 120 (207)
.++.+|||+|||+|.++..+++. +. .+++++|+++.+++.+++++... .++.+...|+.+. ++.++||+|+++
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~V~~~ 188 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--FDEKDVDALFLD 188 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccCEEEEC
Confidence 34459999999999999999987 43 59999999999999999987532 4789999999886 456789999974
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
. .+...+++++.++|+|||.+++....
T Consensus 189 ~------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 189 V------------PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp C------------SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred C------------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 2 23356789999999999999998753
No 222
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.42 E-value=1.1e-12 Score=105.67 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=83.3
Q ss_pred CCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEecccccccc-CCCCeeEEEeCcch
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEF-QTGSFDSVVDKGTL 123 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~-~~~~fD~v~~~~~l 123 (207)
+.+|||+| |+|.++..++..+. .+|+++|+++.+++.+++++.. ..++.++++|+.+..+. ..++||+|+++.++
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 45999999 99999999998875 6999999999999999998763 23799999999983232 34689999999876
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcE-EEEEEeC
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGV-YILVTYG 159 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~-~~~~~~~ 159 (207)
+.. ....+++++.++|+|||. +++....
T Consensus 252 ~~~--------~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 252 TLE--------AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp SHH--------HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred chH--------HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 643 358899999999999994 4555443
No 223
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.42 E-value=2.5e-13 Score=109.68 Aligned_cols=112 Identities=14% Similarity=0.113 Sum_probs=86.4
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEecccccccc---CCCCeeEEEeCcch
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEF---QTGSFDSVVDKGTL 123 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~---~~~~fD~v~~~~~l 123 (207)
.+|||+|||+|.++..++.. ..+|+++|+++.+++.+++++... .++.++++|+.+..+. ...+||+|++..+.
T Consensus 211 ~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPA 289 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCC
Confidence 49999999999999999988 459999999999999999987632 4689999999886321 25789999987554
Q ss_pred hhhccCC--CChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 124 DSLLCGS--NSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 124 ~~~~~~~--~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
....... ........++..+.++|+|||.+++.+++..
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 290 FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 2210000 0014667899999999999999999886554
No 224
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.41 E-value=1.1e-12 Score=101.77 Aligned_cols=87 Identities=16% Similarity=0.274 Sum_probs=69.2
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~ 112 (207)
+..++......++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.... .++.++++|+.+. +++
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~-~~~-- 92 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT-DLP-- 92 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS-CCC--
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc-cch--
Confidence 34455544344445999999999999999999866 9999999999999999987532 4789999999887 333
Q ss_pred CeeEEEeCcchhhh
Q 028547 113 SFDSVVDKGTLDSL 126 (207)
Q Consensus 113 ~fD~v~~~~~l~~~ 126 (207)
.||+|+++.++++.
T Consensus 93 ~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 93 FFDTCVANLPYQIS 106 (285)
T ss_dssp CCSEEEEECCGGGH
T ss_pred hhcEEEEecCcccc
Confidence 79999998776653
No 225
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.41 E-value=2e-13 Score=106.94 Aligned_cols=106 Identities=13% Similarity=0.083 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeC----CHHHHHHHHHHccCCCCceEEEe-ccccccccCCCCeeEEEeC
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDI----SSVVIEAMMKKYSNRPQLKYIKM-DVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~----s~~~i~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~fD~v~~~ 120 (207)
+++.+|||+|||+|.++..+++. .+|+++|+ ++..++.........+++.|+++ |+.++ +.++||+|++.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l---~~~~fD~V~sd 155 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFI---PPERCDTLLCD 155 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTS---CCCCCSEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccC---CcCCCCEEEEC
Confidence 34459999999999999999988 38999998 45333211100001146888888 87765 35689999997
Q ss_pred cchhhhccCCCChhhH---HHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 121 GTLDSLLCGSNSRQNA---TQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~---~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
..++ . +. ...+. ..++..+.++|+|||.|++..+..
T Consensus 156 ~~~~-~--g~-~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 156 IGES-S--PN-PTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCC-C--SS-HHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred Cccc-c--Cc-chhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 6543 1 00 00122 257888999999999999877655
No 226
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.41 E-value=1.9e-13 Score=105.58 Aligned_cols=113 Identities=18% Similarity=0.102 Sum_probs=77.2
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC---C-CCceEE--EeccccccccC
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN---R-PQLKYI--KMDVRQMDEFQ 110 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~---~-~~~~~~--~~d~~~~~~~~ 110 (207)
..+++....+++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... . .++.|+ ++|+.++ +
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---~ 145 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM---E 145 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC---C
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC---C
Confidence 33444333334459999999999999999988 4999999998 43332222111 0 168899 8898886 3
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhH---HHHHHHHHHhcCCCc--EEEEEEeC
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNA---TQMLKEVWRVLKDKG--VYILVTYG 159 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~---~~~l~~~~~~L~pgG--~~~~~~~~ 159 (207)
+++||+|++... +.. +. ...+. ..+++.+.++|+||| .|++..+.
T Consensus 146 ~~~fD~Vvsd~~-~~~--~~-~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 PFQADTVLCDIG-ESN--PT-AAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCCSEEEECCC-CCC--SC-HHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCcCEEEECCC-cCC--Cc-hhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 678999999755 221 00 00111 137899999999999 99998776
No 227
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.41 E-value=1.6e-13 Score=105.42 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=77.7
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC---C-CCceEE--Eecccccccc
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN---R-PQLKYI--KMDVRQMDEF 109 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~---~-~~~~~~--~~d~~~~~~~ 109 (207)
+..+++....+++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... . .++.|+ ++|+.++
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l--- 136 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL--- 136 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS---
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC---
Confidence 344444433344459999999999999999988 4999999998 43222211110 0 168888 8898886
Q ss_pred CCCCeeEEEeCcchhhhccCCCChhhH---HHHHHHHHHhcCCCc--EEEEEEeC
Q 028547 110 QTGSFDSVVDKGTLDSLLCGSNSRQNA---TQMLKEVWRVLKDKG--VYILVTYG 159 (207)
Q Consensus 110 ~~~~fD~v~~~~~l~~~~~~~~~~~~~---~~~l~~~~~~L~pgG--~~~~~~~~ 159 (207)
++++||+|++... +.. +. ...+. ..+++.+.++|+||| .|++..+.
T Consensus 137 ~~~~fD~V~sd~~-~~~--~~-~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 137 PVERTDVIMCDVG-ESS--PK-WSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCCCSEEEECCC-CCC--SC-HHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCCCcEEEEeCc-ccC--Cc-cchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 3678999999755 221 10 00111 137899999999999 99998876
No 228
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.41 E-value=5.6e-13 Score=106.48 Aligned_cols=96 Identities=18% Similarity=0.255 Sum_probs=79.8
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
.+|||+|||+|.++..+++... .+++++|+ +.+++.+++. ++++|..+|+.+. ++ .||+|++..++|++
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~~--~p--~~D~v~~~~~lh~~- 259 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----NNLTYVGGDMFTS--IP--NADAVLLKYILHNW- 259 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----TTEEEEECCTTTC--CC--CCSEEEEESCGGGS-
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----CCcEEEeccccCC--CC--CccEEEeehhhccC-
Confidence 4999999999999999998743 48999999 8888776542 4699999999763 34 39999999999988
Q ss_pred cCCCChhhHHHHHHHHHHhcCC---CcEEEEEEe
Q 028547 128 CGSNSRQNATQMLKEVWRVLKD---KGVYILVTY 158 (207)
Q Consensus 128 ~~~~~~~~~~~~l~~~~~~L~p---gG~~~~~~~ 158 (207)
+......++++++++|+| ||.+++.+.
T Consensus 260 ----~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 260 ----TDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp ----CHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred ----CHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 333445999999999999 999999874
No 229
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.40 E-value=2.6e-12 Score=103.39 Aligned_cols=110 Identities=13% Similarity=0.150 Sum_probs=82.5
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEEeC
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~ 120 (207)
..++.+|||+|||+|.++..++..+. .+++|+|+++.+++.+++++... .++.+.++|+.+. +.+.++||+|+++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~-~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL-SQYVDSVDFAISN 293 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG-GGTCSCEEEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC-CcccCCcCEEEEC
Confidence 34445999999999999999999865 48999999999999999987632 4789999999998 4667899999998
Q ss_pred cchhhhccCCCC-hhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 121 GTLDSLLCGSNS-RQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 121 ~~l~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.++......... ......+++.+.++| +|.+++++
T Consensus 294 pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 294 LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 776542111111 123477888889988 45555555
No 230
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.40 E-value=4.9e-13 Score=100.33 Aligned_cols=100 Identities=12% Similarity=0.137 Sum_probs=80.4
Q ss_pred CCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccc-cCC----CCeeEE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDE-FQT----GSFDSV 117 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~-~~~----~~fD~v 117 (207)
+.+|||+|||+|..+..+++.. ..+++++|+++.+++.+++++... .++.++++|+.+..+ ... ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 3499999999999999999862 249999999999999999887532 478999999876421 111 689999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
++.... .....+++.+.++|+|||.+++..
T Consensus 150 ~~d~~~----------~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 150 VVDADK----------ENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EECSCS----------TTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCH----------HHHHHHHHHHHHHcCCCeEEEEEC
Confidence 986442 456788999999999999999865
No 231
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=1.1e-12 Score=104.24 Aligned_cols=102 Identities=20% Similarity=0.216 Sum_probs=82.7
Q ss_pred hhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccccccCCCCeeEEE
Q 028547 42 LYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 42 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~ 118 (207)
....+. .+|||+|||+|.++.. ++ +..+|+++|+++.+++.+++++... .++.++++|+.+.. ++||+|+
T Consensus 191 ~~~~~~-~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi 263 (336)
T 2yx1_A 191 KKVSLN-DVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVI 263 (336)
T ss_dssp HHCCTT-CEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEE
T ss_pred HhcCCC-CEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEE
Confidence 333444 4999999999999999 87 4569999999999999999987632 47999999999873 7899999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
++.+.. ...+++.+.++|+|||.+++.+++..
T Consensus 264 ~dpP~~-----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 264 MNLPKF-----------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ECCTTT-----------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ECCcHh-----------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 875422 23678889999999999999887654
No 232
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.38 E-value=2.3e-13 Score=103.77 Aligned_cols=79 Identities=11% Similarity=0.097 Sum_probs=61.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccc--cccC---CCCeeEEE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQM--DEFQ---TGSFDSVV 118 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~--~~~~---~~~fD~v~ 118 (207)
+.+|||+|||+|.++..++... ..+++++|+++.+++.++++.... .++.++++|+.+. .+++ +++||+|+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 3499999999999998888763 249999999999999999987532 3489999997662 1233 26899999
Q ss_pred eCcchhhh
Q 028547 119 DKGTLDSL 126 (207)
Q Consensus 119 ~~~~l~~~ 126 (207)
++.+++..
T Consensus 146 ~npp~~~~ 153 (254)
T 2h00_A 146 CNPPFFAN 153 (254)
T ss_dssp ECCCCC--
T ss_pred ECCCCccC
Confidence 99776643
No 233
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.38 E-value=2.2e-12 Score=105.84 Aligned_cols=116 Identities=14% Similarity=0.127 Sum_probs=86.8
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhc--CCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCeeEEEeC
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDD--GYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~ 120 (207)
..++.+|||+|||+|..+..+++. +...|+++|+++.+++.+++++.. ..++.+.+.|+.++.....++||+|+++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 344459999999999999999875 224899999999999999998763 3578999999988743346789999987
Q ss_pred cchhhhccCCCCh---------------hhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 121 GTLDSLLCGSNSR---------------QNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 121 ~~l~~~~~~~~~~---------------~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.+........... .....+++.+.++|+|||.++++|++-
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 6533221100000 123478999999999999999988644
No 234
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.38 E-value=5.4e-13 Score=100.55 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=80.2
Q ss_pred CCcEEEEcCCCchhhHHHHhcCC--CcEEEEeCCHHHHHHHHHHccC--C-CCceEEEeccccccc-c--CC--CCeeEE
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGY--EDVVNVDISSVVIEAMMKKYSN--R-PQLKYIKMDVRQMDE-F--QT--GSFDSV 117 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~i~~~~~~~~~--~-~~~~~~~~d~~~~~~-~--~~--~~fD~v 117 (207)
+.+|||+|||+|..+..+++... .+++++|+++.+++.+++++.. . .++.++.+|+.+..+ + .. ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 34999999999999999998632 4999999999999999987642 1 368999999866311 1 22 789999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++.... .....+++++.++|+|||.+++...
T Consensus 153 ~~d~~~----------~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 153 FIDADK----------RNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EECSCG----------GGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EECCCH----------HHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 976442 4567899999999999999998653
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.37 E-value=3.2e-12 Score=93.45 Aligned_cols=102 Identities=16% Similarity=0.199 Sum_probs=74.2
Q ss_pred CCcEEEEcCCCchhhHHHHhc-CC---------CcEEEEeCCHHHHHHHHHHccCCCCceEE-Eecccccc-------cc
Q 028547 48 HQRILIVGCGNSAFSEGMVDD-GY---------EDVVNVDISSVVIEAMMKKYSNRPQLKYI-KMDVRQMD-------EF 109 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~-~~---------~~v~~~D~s~~~i~~~~~~~~~~~~~~~~-~~d~~~~~-------~~ 109 (207)
+.+|||+|||+|.++..+++. +. .+++++|+++.. ...++.++ ..|+.+.. .+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLCPADVTDPRTSQRILEVL 93 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEECSCCTTSHHHHHHHHHHS
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEEeccCCCHHHHHHHHHhc
Confidence 349999999999999999987 32 589999999831 12468888 88877642 12
Q ss_pred CCCCeeEEEeCcchhhhccCCCChhhH-------HHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 110 QTGSFDSVVDKGTLDSLLCGSNSRQNA-------TQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 110 ~~~~fD~v~~~~~l~~~~~~~~~~~~~-------~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+.++||+|++...++.... ...+. ..+++++.++|+|||.+++.++...
T Consensus 94 ~~~~fD~V~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 94 PGRRADVILSDMAPNATGF---RDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp GGGCEEEEEECCCCCCCSC---HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred CCCCCcEEEeCCCCCCCCC---cccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 3468999999765443100 00122 5789999999999999999887554
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.37 E-value=2.7e-12 Score=105.44 Aligned_cols=115 Identities=13% Similarity=0.143 Sum_probs=86.1
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCeeEEEeC
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~ 120 (207)
.+++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++.. .. +.+++.|+.++.....++||+|+++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 3444599999999999999999763 24899999999999999998763 24 8899999888743346789999976
Q ss_pred cchhhhcc-C--C-----CCh-------hhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 121 GTLDSLLC-G--S-----NSR-------QNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 121 ~~l~~~~~-~--~-----~~~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.+...... . + ... .....+++.+.++|+|||.+++++++-
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 55422110 0 0 011 124789999999999999999988643
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.35 E-value=3.3e-12 Score=105.66 Aligned_cols=114 Identities=11% Similarity=0.144 Sum_probs=85.7
Q ss_pred CCCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++.. ..++.+++.|+.++.....++||+|++..+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 44599999999999999999862 24899999999999999998762 357899999998873224578999998644
Q ss_pred hhhhc---cCC-----CCh-------hhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 123 LDSLL---CGS-----NSR-------QNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 123 l~~~~---~~~-----~~~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
..... ..+ ... .....+++++.++|||||.+++++++-
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 32211 000 011 124678999999999999999988643
No 238
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.35 E-value=5.6e-12 Score=103.83 Aligned_cols=117 Identities=14% Similarity=0.149 Sum_probs=86.4
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcC-C-CcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccc-cCCCCeeEEEe
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDG-Y-EDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDE-FQTGSFDSVVD 119 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~-~~~~~fD~v~~ 119 (207)
.+++.+|||+|||+|..+..+++.. . .+++++|+++..++.+++++.. ..++.+++.|+.+..+ ++.++||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 3444599999999999999998853 2 4899999999999999998763 2578999999988632 34478999997
Q ss_pred Ccchhhhcc-CCCC-------hh-------hHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 120 KGTLDSLLC-GSNS-------RQ-------NATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 120 ~~~l~~~~~-~~~~-------~~-------~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
..+...... ...+ .. ....+++++.++|+|||.+++++++..
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 544322211 0000 01 126789999999999999999987543
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.35 E-value=1.8e-12 Score=103.26 Aligned_cols=108 Identities=13% Similarity=0.148 Sum_probs=82.1
Q ss_pred CcEEEEcCCCchhhHHHHhcCC------CcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccCCCCeeEEEeCc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY------EDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~------~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.+... ..++.+.++|..... ....||+|+++.
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~--~~~~fD~Ii~NP 209 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANL--LVDPVDVVISDL 209 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC--CCCCEEEEEEEC
T ss_pred CEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCcc--ccCCccEEEECC
Confidence 4999999999999998887631 4899999999999999987641 136789999987752 467899999998
Q ss_pred chhhhccC----------CCChh-hHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 122 TLDSLLCG----------SNSRQ-NATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 122 ~l~~~~~~----------~~~~~-~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++.++... ..+.. ....+++.+.+.|+|||.++++..
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 87654100 00111 223689999999999999988873
No 240
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.35 E-value=6.3e-12 Score=97.72 Aligned_cols=88 Identities=14% Similarity=0.166 Sum_probs=71.8
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCee
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD 115 (207)
+..+++.....++.+|||||||+|.++..+++.+. +|+++|+++.+++.+++++....++.++++|+.+. +++..+||
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~-~~~~~~fD 116 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKV-DLNKLDFN 116 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTS-CGGGSCCS
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhC-CcccCCcc
Confidence 44455554444445999999999999999999854 99999999999999999876446899999999997 45667899
Q ss_pred EEEeCcchhh
Q 028547 116 SVVDKGTLDS 125 (207)
Q Consensus 116 ~v~~~~~l~~ 125 (207)
.|+++.+++.
T Consensus 117 ~Iv~NlPy~i 126 (295)
T 3gru_A 117 KVVANLPYQI 126 (295)
T ss_dssp EEEEECCGGG
T ss_pred EEEEeCcccc
Confidence 9999876653
No 241
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.34 E-value=4.9e-12 Score=103.62 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=86.7
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccc-cCCCCeeEEEeCc
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDE-FQTGSFDSVVDKG 121 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~-~~~~~fD~v~~~~ 121 (207)
.+++.+|||+|||+|..+..+++... .+++++|+++..++.+++++... .++.+++.|+.+..+ ++.++||+|+++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 34445999999999999999998754 59999999999999999887632 357899999988632 4557899999865
Q ss_pred chhhhcc-CCCC-------hh-------hHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 122 TLDSLLC-GSNS-------RQ-------NATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 122 ~l~~~~~-~~~~-------~~-------~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+...... ...+ .. ....+++++.++|+|||.+++++++-
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 4432211 0001 11 23588999999999999999998644
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.34 E-value=3.5e-12 Score=96.22 Aligned_cols=103 Identities=12% Similarity=0.123 Sum_probs=84.0
Q ss_pred CCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccCCCCeeEEEeCc
Q 028547 44 VPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 44 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
+..+ .+|||||||+|-++..+.... ...|+++|+++.+++.+++++.. ..+.++...|..... +.+.||++++.-
T Consensus 130 i~~p-~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~--p~~~~DvaL~lk 206 (281)
T 3lcv_B 130 LPRP-NTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR--LDEPADVTLLLK 206 (281)
T ss_dssp SCCC-SEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC--CCSCCSEEEETT
T ss_pred cCCC-ceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC--CCCCcchHHHHH
Confidence 3444 499999999999999988874 36999999999999999999764 356788888888763 678899999999
Q ss_pred chhhhccCCCChhhH--HHHHHHHHHhcCCCcEEEEEE
Q 028547 122 TLDSLLCGSNSRQNA--TQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+++++ ++. ...+ ++.+.|+++|+++-..
T Consensus 207 ti~~L-------e~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 207 TLPCL-------ETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp CHHHH-------HHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHh-------hhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 99998 332 2444 8999999999987543
No 243
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.33 E-value=2.1e-12 Score=103.38 Aligned_cols=96 Identities=17% Similarity=0.224 Sum_probs=79.0
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
.+|||+|||+|.++..+++... .+++++|+ +.+++.+++ ..++.+..+|+.+ +++ .||+|++..++|++
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~--~~~--~~D~v~~~~vlh~~- 264 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----NENLNFVGGDMFK--SIP--SADAVLLKWVLHDW- 264 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----CSSEEEEECCTTT--CCC--CCSEEEEESCGGGS-
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----CCCcEEEeCccCC--CCC--CceEEEEcccccCC-
Confidence 4999999999999999998754 38999999 777765543 2469999999987 344 49999999999988
Q ss_pred cCCCChhhHHHHHHHHHHhcCC---CcEEEEEEe
Q 028547 128 CGSNSRQNATQMLKEVWRVLKD---KGVYILVTY 158 (207)
Q Consensus 128 ~~~~~~~~~~~~l~~~~~~L~p---gG~~~~~~~ 158 (207)
+......++++++++|+| ||.+++.++
T Consensus 265 ----~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 265 ----NDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp ----CHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred ----CHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 333455999999999999 999999774
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.33 E-value=1.4e-11 Score=96.19 Aligned_cols=86 Identities=20% Similarity=0.277 Sum_probs=64.5
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc--CCCCceEEEeccccccccCCCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS--NRPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~ 113 (207)
+..+++.....++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.. ...++.++++|+.+. ++ .+
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~-~~--~~ 106 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT-VF--PK 106 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS-CC--CC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC-Cc--cc
Confidence 34455544444445999999999999999998865 99999999999999998864 225899999999887 23 48
Q ss_pred eeEEEeCcchhh
Q 028547 114 FDSVVDKGTLDS 125 (207)
Q Consensus 114 fD~v~~~~~l~~ 125 (207)
||+|+++.+++.
T Consensus 107 ~D~Vv~n~py~~ 118 (299)
T 2h1r_A 107 FDVCTANIPYKI 118 (299)
T ss_dssp CSEEEEECCGGG
T ss_pred CCEEEEcCCccc
Confidence 999999877664
No 245
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.32 E-value=6.6e-12 Score=99.43 Aligned_cols=113 Identities=19% Similarity=0.236 Sum_probs=82.5
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC----------CCceEEEecccccccc---CCCC
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR----------PQLKYIKMDVRQMDEF---QTGS 113 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~----------~~~~~~~~d~~~~~~~---~~~~ 113 (207)
.+++||+||||+|..+.++++.+..+|+++|+++.+++.++++++.. ++++++.+|+.+.... ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 44699999999999999999887678999999999999999997631 2689999999986321 3678
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHH----HHhcCCCcEEEEEEeCC
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEV----WRVLKDKGVYILVTYGA 160 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~----~~~L~pgG~~~~~~~~~ 160 (207)
||+|++...-......+ .......+++.+ .++|+|||++++...+.
T Consensus 268 fDvII~D~~d~P~~~~p-~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSP-EEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp EEEEEEECCSSCCCCC-----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred ceEEEECCCCcccCcCc-hhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 99999864320110001 011234455554 99999999999877544
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.31 E-value=6.9e-12 Score=93.72 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=79.7
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+.+|||+|||+|.++..+. +...|+++|+++.+++.+++++.. ..+..+..+|..... +.++||+|++.-+++++
T Consensus 106 p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--~~~~~DvvLllk~lh~L 181 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--PAEAGDLALIFKLLPLL 181 (253)
T ss_dssp CSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC--CCCBCSEEEEESCHHHH
T ss_pred CCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC--CCCCcchHHHHHHHHHh
Confidence 3499999999999999877 345999999999999999998753 367889999999873 55699999999888887
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+.......-++.+.|+++|+++-..
T Consensus 182 ------E~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 182 ------EREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ------HHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred ------hhhchhhHHHHHHHhcCCCEEEEcC
Confidence 2223333448888999998877544
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.31 E-value=2e-11 Score=100.03 Aligned_cols=99 Identities=13% Similarity=0.229 Sum_probs=76.5
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEecccccc---ccCCCCeeEEEeC
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMD---EFQTGSFDSVVDK 120 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~---~~~~~~fD~v~~~ 120 (207)
..+.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++... ..++.|+++|+.+.. ++..++||+|+++
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~-~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAA-SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCC-EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 3334999999999999999999844 999999999999999998753 258999999998842 2456789999987
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
.+.... ..+++.+.+ ++|+++++++
T Consensus 364 PPr~g~----------~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 364 PARAGA----------AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp CCTTCC----------HHHHHHHHH-HCCSEEEEEE
T ss_pred CCCccH----------HHHHHHHHh-cCCCeEEEEE
Confidence 665432 235555544 6888887764
No 248
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.28 E-value=2.6e-12 Score=92.55 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=72.1
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---CCCCeeEEEeCcchhh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---QTGSFDSVVDKGTLDS 125 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~fD~v~~~~~l~~ 125 (207)
.+|||+|||. + ++|+|+.+++.++++... ++.+.++|+.++ ++ ++++||+|++..++++
T Consensus 14 ~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~~--~~~~~~~d~~~~-~~~~~~~~~fD~V~~~~~l~~ 75 (176)
T 2ld4_A 14 QFVAVVWDKS--------------S-PVEALKGLVDKLQALTGN--EGRVSVENIKQL-LQSAHKESSFDIILSGLVPGS 75 (176)
T ss_dssp SEEEEEECTT--------------S-CHHHHHHHHHHHHHHTTT--TSEEEEEEGGGG-GGGCCCSSCEEEEEECCSTTC
T ss_pred CEEEEecCCc--------------e-eeeCCHHHHHHHHHhccc--CcEEEEechhcC-ccccCCCCCEeEEEECChhhh
Confidence 4999999986 1 399999999999998754 589999999987 44 6889999999988887
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+ ..+...++++++++|||||.+++..
T Consensus 76 ~------~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 76 T------TLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp C------CCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred c------ccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 5 1345889999999999999999965
No 249
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.27 E-value=7.2e-11 Score=90.02 Aligned_cols=86 Identities=19% Similarity=0.364 Sum_probs=68.5
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC----C
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ----T 111 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~----~ 111 (207)
+..+++.....++.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++....+++++++|+.+.. ++ .
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~-~~~~~~~ 95 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFD-FSSVKTD 95 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS-EEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCC-GGGSCCS
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCC-HHHhccC
Confidence 34555555444455999999999999999999874 999999999999999999876568999999999973 32 3
Q ss_pred CCeeEEEeCcchh
Q 028547 112 GSFDSVVDKGTLD 124 (207)
Q Consensus 112 ~~fD~v~~~~~l~ 124 (207)
++|| |+++.++.
T Consensus 96 ~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 96 KPLR-VVGNLPYN 107 (255)
T ss_dssp SCEE-EEEECCHH
T ss_pred CCeE-EEecCCcc
Confidence 5688 77775554
No 250
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.26 E-value=1.1e-10 Score=88.66 Aligned_cols=84 Identities=15% Similarity=0.308 Sum_probs=65.0
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCC-CCeeE
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQT-GSFDS 116 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~fD~ 116 (207)
.++......++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++....++.++++|+.+. +++. ..| .
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~-~~~~~~~~-~ 97 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN-FVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQF-KFPKNQSY-K 97 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGC-CCCSSCCC-E
T ss_pred HHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC-eEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhC-CcccCCCe-E
Confidence 344433333445999999999999999999874 99999999999999999886556899999999987 3443 445 5
Q ss_pred EEeCcchh
Q 028547 117 VVDKGTLD 124 (207)
Q Consensus 117 v~~~~~l~ 124 (207)
|+++.+++
T Consensus 98 vv~nlPy~ 105 (244)
T 1qam_A 98 IFGNIPYN 105 (244)
T ss_dssp EEEECCGG
T ss_pred EEEeCCcc
Confidence 66665554
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.24 E-value=9.1e-13 Score=100.11 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=82.1
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC-CCC
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ-TGS 113 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~ 113 (207)
.+..+++.....++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++.....++.++++|+.+. +++ .++
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~-~~~~~~~ 94 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQF-QFPNKQR 94 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTT-TCCCSSE
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhc-CcccCCC
Confidence 34455555444444599999999999999999987 499999999999998888765445789999999987 344 367
Q ss_pred eeEEEeCcchhhhccCCCChhhHHH----------HH----HHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQ----------ML----KEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~----------~l----~~~~~~L~pgG~~~~~~ 157 (207)
| .|+++.+++.. ...... .+ +.+.++|+|||.+.+..
T Consensus 95 f-~vv~n~Py~~~------~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 95 Y-KIVGNIPYHLS------TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp E-EEEEECCSSSC------HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred c-EEEEeCCcccc------HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8 67776544321 111112 22 66889999999877654
No 252
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.24 E-value=2.8e-11 Score=97.23 Aligned_cols=99 Identities=12% Similarity=0.270 Sum_probs=75.7
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccc-cCC-------------
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDE-FQT------------- 111 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~------------- 111 (207)
+.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++++... .++.|+++|+.+..+ ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 348999999999999999885 459999999999999999987632 589999999887522 121
Q ss_pred -CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 112 -GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 112 -~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
.+||+|++..+... +..++.+.|+++|.++++++..
T Consensus 293 ~~~fD~Vv~dPPr~g-------------~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 293 SYQCETIFVDPPRSG-------------LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GCCEEEEEECCCTTC-------------CCHHHHHHHTTSSEEEEEESCH
T ss_pred cCCCCEEEECcCccc-------------cHHHHHHHHhCCCEEEEEECCH
Confidence 37999997755332 2345666777899988877544
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.24 E-value=1.2e-11 Score=100.86 Aligned_cols=117 Identities=18% Similarity=0.243 Sum_probs=83.9
Q ss_pred cCHHHHHHhhCC-CCCCcEEEEcCCCchhhHHHHhc--CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC
Q 028547 34 PSLAPLIKLYVP-SHHQRILIVGCGNSAFSEGMVDD--GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 34 ~~~~~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~ 110 (207)
+.+.+.+...+. ..+.+|||+|||+|.++..+++. ...+++|+|+++.+++.+ .++.++++|+.+.. .
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------~~~~~~~~D~~~~~--~ 95 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------PWAEGILADFLLWE--P 95 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------TTEEEEESCGGGCC--C
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------CCCcEEeCChhhcC--c
Confidence 334444444433 23349999999999999999875 235999999999887666 36889999998873 4
Q ss_pred CCCeeEEEeCcchhhhccCC-----CCh-----------------hhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 111 TGSFDSVVDKGTLDSLLCGS-----NSR-----------------QNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~-----~~~-----------------~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
.++||+|+++.++....... ... +....+++.+.++|+|||.+.++...
T Consensus 96 ~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 96 GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 57899999987765431100 001 12236799999999999999998754
No 254
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.22 E-value=8.4e-11 Score=95.97 Aligned_cols=94 Identities=17% Similarity=0.223 Sum_probs=73.4
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++... .. +.|+++|+.+.. +. +||+|+++.+....
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~--~~-~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS--VK-GFDTVIVDPPRAGL 366 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC--CT-TCSEEEECCCTTCS
T ss_pred CEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC--cc-CCCEEEEcCCccch
Confidence 4999999999999999999855 999999999999999998752 23 899999999873 22 89999987653321
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
...+++.+. .|+|+|+++++.
T Consensus 367 ---------~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 367 ---------HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ---------CHHHHHHHH-HHCCSEEEEEES
T ss_pred ---------HHHHHHHHH-hcCCCcEEEEEC
Confidence 123444444 489999988753
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.21 E-value=1.8e-10 Score=92.81 Aligned_cols=108 Identities=11% Similarity=0.119 Sum_probs=84.2
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY---------------------------------------EDVVNVDISSVVIEAM 86 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~---------------------------------------~~v~~~D~s~~~i~~~ 86 (207)
++...|||++||+|.++++++..+. .+++|+|+++.+++.+
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 3445999999999999988876432 2599999999999999
Q ss_pred HHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCC--CcEEEEEEe
Q 028547 87 MKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKD--KGVYILVTY 158 (207)
Q Consensus 87 ~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~p--gG~~~~~~~ 158 (207)
++++... ..+.|.+.|+.+.. . ..+||+|+++.++..- .........+++.+.+.|++ ||.+++.+.
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~-~-~~~fD~Iv~NPPYG~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFK-T-NKINGVLISNPPYGER---LLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCC-C-CCCSCEEEECCCCTTT---TSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHcCCCCceEEEECChHHCC-c-cCCcCEEEECCchhhc---cCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9987632 35899999999983 2 3589999999887532 22345677788888888876 888888874
No 256
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.19 E-value=7.4e-11 Score=90.64 Aligned_cols=86 Identities=13% Similarity=0.184 Sum_probs=71.2
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCC-CC
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQT-GS 113 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~ 113 (207)
.+..+++.....++ +|||+|||+|.++..+++.+. +|+++|+++.+++.+++++.. .+++++++|+.+.. ++. ..
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~-~~v~vi~~D~l~~~-~~~~~~ 110 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG-LPVRLVFQDALLYP-WEEVPQ 110 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT-SSEEEEESCGGGSC-GGGSCT
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC-CCEEEEECChhhCC-hhhccC
Confidence 34556666656667 999999999999999999975 999999999999999998874 58999999999873 443 36
Q ss_pred eeEEEeCcchh
Q 028547 114 FDSVVDKGTLD 124 (207)
Q Consensus 114 fD~v~~~~~l~ 124 (207)
+|.|+++.+++
T Consensus 111 ~~~iv~NlPy~ 121 (271)
T 3fut_A 111 GSLLVANLPYH 121 (271)
T ss_dssp TEEEEEEECSS
T ss_pred ccEEEecCccc
Confidence 89999987665
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.18 E-value=7.9e-11 Score=96.87 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=87.3
Q ss_pred CHHHHH-HhhCCCCCCcEEEEcCCCchhhHHHHhc--------------CCCcEEEEeCCHHHHHHHHHHcc--CCC--C
Q 028547 35 SLAPLI-KLYVPSHHQRILIVGCGNSAFSEGMVDD--------------GYEDVVNVDISSVVIEAMMKKYS--NRP--Q 95 (207)
Q Consensus 35 ~~~~~l-~~~~~~~~~~vLdiG~G~G~~~~~l~~~--------------~~~~v~~~D~s~~~i~~~~~~~~--~~~--~ 95 (207)
.+...+ +...+..+.+|||+|||+|.++..+++. ...+++|+|+++.+++.|+.++. ... +
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 334333 3333444459999999999999888764 12489999999999999988754 222 6
Q ss_pred ceEEEeccccccccCCCCeeEEEeCcchhhhccCCC----------ChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 96 LKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSN----------SRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 96 ~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~----------~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
..+.++|..... ...+||+|+++.++........ .......+++.+.+.|+|||.+.++..
T Consensus 238 ~~i~~gD~l~~~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 238 SPIVCEDSLEKE--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSEEECCTTTSC--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEeeCCCCCCc--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 789999988763 2348999999988875421110 011235789999999999999988773
No 258
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=1.2e-10 Score=94.19 Aligned_cols=108 Identities=14% Similarity=0.181 Sum_probs=80.4
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY---------------------------------------EDVVNVDISSVVIEAM 86 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~---------------------------------------~~v~~~D~s~~~i~~~ 86 (207)
.++.+|||++||+|.++++++..+. .+++|+|+++.+++.+
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3445999999999999988876532 2599999999999999
Q ss_pred HHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCC--CcEEEEEEe
Q 028547 87 MKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKD--KGVYILVTY 158 (207)
Q Consensus 87 ~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~p--gG~~~~~~~ 158 (207)
++++... .++.+.+.|+.+.. ...+||+|+++.++..- .........+.+.+.+.|++ ||.+++.+.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~--~~~~fD~Iv~NPPYg~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQ--TEDEYGVVVANPPYGER---LEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCC--CCCCSCEEEECCCCCCS---HHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHcCCCCceEEEECChHhCC--CCCCCCEEEECCCCccc---cCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9987632 35999999999983 34589999999876421 00113455666666666665 888888774
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.15 E-value=2.3e-10 Score=92.26 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=81.8
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGY---------------------------------------EDVVNVDISSVVIEAM 86 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~---------------------------------------~~v~~~D~s~~~i~~~ 86 (207)
.++.+|||++||+|.+++.++..+. .+|+|+|+++.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 3345999999999999998876531 3699999999999999
Q ss_pred HHHccCC---CCceEEEeccccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCC--CcEEEEEEe
Q 028547 87 MKKYSNR---PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKD--KGVYILVTY 158 (207)
Q Consensus 87 ~~~~~~~---~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~p--gG~~~~~~~ 158 (207)
++++... .++.|.+.|+.+.. ...+||+|+++.++..- .........+.+.+.+.|++ |+.+++.+.
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~--~~~~~D~Iv~NPPyg~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFK--SEDEFGFIITNPPYGER---LEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCC--CSCBSCEEEECCCCCCS---HHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHcCCCCceEEEECChhhcC--cCCCCcEEEECCCCcCc---cCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 9987632 36899999999973 34689999999886421 01124566677777777776 888888774
No 260
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.13 E-value=6.2e-11 Score=95.46 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=78.4
Q ss_pred CCcEEEEcCCCchhhHHHHhc--CCCcEEEEeCCHHHHHHHHHHccCC--CC--ceEEEeccccccc-cCCCCeeEEEeC
Q 028547 48 HQRILIVGCGNSAFSEGMVDD--GYEDVVNVDISSVVIEAMMKKYSNR--PQ--LKYIKMDVRQMDE-FQTGSFDSVVDK 120 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~i~~~~~~~~~~--~~--~~~~~~d~~~~~~-~~~~~fD~v~~~ 120 (207)
+.+|||++||+|.++..++.. |..+|+++|+++.+++.+++++... .+ +.++++|+.+... ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 349999999999999999985 4358999999999999999998732 34 8999999988632 224679999987
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. +. ....+++.+.+.|++||+++++.
T Consensus 133 P-~g----------~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P-FG----------TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C-SS----------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-Cc----------CHHHHHHHHHHHhCCCCEEEEEe
Confidence 5 21 12458888999999999777654
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.13 E-value=8.8e-10 Score=86.29 Aligned_cols=115 Identities=7% Similarity=-0.001 Sum_probs=81.0
Q ss_pred CCCCCcEEEEcCCCchhhHHHHhc--CCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEeccccccccC--CCCeeEEE
Q 028547 45 PSHHQRILIVGCGNSAFSEGMVDD--GYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEFQ--TGSFDSVV 118 (207)
Q Consensus 45 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~~--~~~fD~v~ 118 (207)
.+++.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++... .++.+++.|+.+..+.. ..+||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 344459999999999999999885 2359999999999999999987632 57999999998863211 15799999
Q ss_pred eCcchhhhccCC---C-------Ch-------hhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 119 DKGTLDSLLCGS---N-------SR-------QNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 119 ~~~~l~~~~~~~---~-------~~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+..+........ . +. .....+++.+.++++ ||.+++++++-
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 865543221100 0 00 122456777777776 99999988654
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.13 E-value=7.8e-11 Score=94.73 Aligned_cols=98 Identities=14% Similarity=0.059 Sum_probs=76.9
Q ss_pred CCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCC-----------------CCceEEEecccccccc
Q 028547 48 HQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNR-----------------PQLKYIKMDVRQMDEF 109 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~-----------------~~~~~~~~d~~~~~~~ 109 (207)
+.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++++... .++.++++|+.+....
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 349999999999999999987 4458999999999999999886522 2488999999886322
Q ss_pred CCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 110 QTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 110 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
..+.||+|+.... . ....+++.+.+.|++||.++++
T Consensus 128 ~~~~fD~I~lDP~-~----------~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 128 RHRYFHFIDLDPF-G----------SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp STTCEEEEEECCS-S----------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCEEEeCCC-C----------CHHHHHHHHHHhcCCCCEEEEE
Confidence 2467999996542 2 1256788889999999987765
No 263
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.12 E-value=2e-10 Score=88.95 Aligned_cols=100 Identities=10% Similarity=0.032 Sum_probs=69.6
Q ss_pred CCCcEEEEcCCC------chhhHHHHhc-C-CCcEEEEeCCHHHHHHHHHHccCCCCceE-EEeccccccccCCCCeeEE
Q 028547 47 HHQRILIVGCGN------SAFSEGMVDD-G-YEDVVNVDISSVVIEAMMKKYSNRPQLKY-IKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 47 ~~~~vLdiG~G~------G~~~~~l~~~-~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~fD~v 117 (207)
++.+|||+|||+ |. ..+++. + ..+|+|+|+++. . .++.+ +++|+.+. ++ .++||+|
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---~~v~~~i~gD~~~~-~~-~~~fD~V 127 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---SDADSTLIGDCATV-HT-ANKWDLI 127 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---CSSSEEEESCGGGC-CC-SSCEEEE
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---CCCEEEEECccccC-Cc-cCcccEE
Confidence 334999999955 65 333433 3 248999999997 1 37889 99999987 33 3689999
Q ss_pred EeCcchhhh----ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 118 VDKGTLDSL----LCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 118 ~~~~~l~~~----~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
+++...+.. ............+++.+.++|+|||.|++..+...
T Consensus 128 vsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~ 175 (290)
T 2xyq_A 128 ISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 175 (290)
T ss_dssp EECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred EEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 997432211 01111234567899999999999999999776543
No 264
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.12 E-value=4.2e-10 Score=86.86 Aligned_cols=111 Identities=19% Similarity=0.352 Sum_probs=87.8
Q ss_pred CCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHcc-------CCCCceEEEeccccccccCCCCee
Q 028547 44 VPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYS-------NRPQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 44 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~fD 115 (207)
.++++++||-||.|.|..+.++++.. ..+++.+|+++..++.+++.++ +.++++++..|+.+......++||
T Consensus 80 ~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 80 AHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp HSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred hCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 34555699999999999999999874 3699999999999999998764 237899999999997555678999
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+|+.... +.. +....-....+++.+.+.|+|||+++...
T Consensus 160 vIi~D~~-dp~--~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 160 VIISDCT-DPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEESCC-CCC--CTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEeCC-CcC--CCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 9997632 211 11122356788999999999999999864
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.07 E-value=1.1e-09 Score=83.27 Aligned_cols=84 Identities=12% Similarity=0.240 Sum_probs=63.8
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCC--CCe
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQT--GSF 114 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~f 114 (207)
..+++.....++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++ ...+++++++|+.+. +++. +.+
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~~~~v~~i~~D~~~~-~~~~~~~~~ 97 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--GDERLEVINEDASKF-PFCSLGKEL 97 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--CCTTEEEECSCTTTC-CGGGSCSSE
T ss_pred HHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--cCCCeEEEEcchhhC-ChhHccCCc
Confidence 44555544444459999999999999999998645999999999999999887 336899999999987 3332 233
Q ss_pred eEEEeCcchh
Q 028547 115 DSVVDKGTLD 124 (207)
Q Consensus 115 D~v~~~~~l~ 124 (207)
.|+++.+++
T Consensus 98 -~vv~NlPy~ 106 (249)
T 3ftd_A 98 -KVVGNLPYN 106 (249)
T ss_dssp -EEEEECCTT
T ss_pred -EEEEECchh
Confidence 666665543
No 266
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.05 E-value=5.7e-11 Score=90.13 Aligned_cols=121 Identities=12% Similarity=0.055 Sum_probs=75.4
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCC
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 113 (207)
.+.++.+....++..+|||||||+|.+++.+++. +...++++|+.-++............++.+...++... .+..++
T Consensus 62 KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~-~l~~~~ 140 (277)
T 3evf_A 62 KLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIH-RLEPVK 140 (277)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTT-TSCCCC
T ss_pred HHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceeh-hcCCCC
Confidence 3555555544455559999999999999998876 34578888887432000000000001455555554333 456789
Q ss_pred eeEEEeCcchhhhccCCC--ChhhHHHHHHHHHHhcCCC-cEEEEEEeC
Q 028547 114 FDSVVDKGTLDSLLCGSN--SRQNATQMLKEVWRVLKDK-GVYILVTYG 159 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~L~pg-G~~~~~~~~ 159 (207)
||+|++....+ - +.. .......+++.+.++|+|| |.|++-.|.
T Consensus 141 ~DlVlsD~apn-s--G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 141 CDTLLCDIGES-S--SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CSEEEECCCCC-C--SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccEEEecCccC-c--CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99999986554 1 110 0111123478889999999 999998887
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.03 E-value=4.4e-10 Score=94.39 Aligned_cols=124 Identities=10% Similarity=0.021 Sum_probs=87.1
Q ss_pred CHHHH-HHhhCCCCCCcEEEEcCCCchhhHHHHhc----C---------------CCcEEEEeCCHHHHHHHHHHcc--C
Q 028547 35 SLAPL-IKLYVPSHHQRILIVGCGNSAFSEGMVDD----G---------------YEDVVNVDISSVVIEAMMKKYS--N 92 (207)
Q Consensus 35 ~~~~~-l~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~---------------~~~v~~~D~s~~~i~~~~~~~~--~ 92 (207)
.+..+ ++...+....+|+|.|||+|.++..+++. . ...++|+|+++.++..|+.++. .
T Consensus 156 ~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g 235 (541)
T 2ar0_A 156 PLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD 235 (541)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC
Confidence 34444 33333444459999999999999877653 1 1379999999999999988754 2
Q ss_pred CCC-----ceEEEeccccccccCCCCeeEEEeCcchhhhccCC-------CChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 93 RPQ-----LKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLCGS-------NSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 93 ~~~-----~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~-------~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
..+ ..+.++|..........+||+|+++.++....... ........+++.+.+.|+|||.+.++..
T Consensus 236 i~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 236 IEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 233 78899998775333457899999998876531110 0012234789999999999999888763
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.02 E-value=1.9e-09 Score=83.15 Aligned_cols=85 Identities=12% Similarity=0.220 Sum_probs=64.2
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCc----EEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYED----VVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQT 111 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~----v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 111 (207)
+..+++.....++.+|||||||+|.++..+++.+. . |+++|+++.+++.++++. ..++.++++|+.+. +++.
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~--~~~v~~i~~D~~~~-~~~~ 106 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF--GELLELHAGDALTF-DFGS 106 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH--GGGEEEEESCGGGC-CGGG
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc--CCCcEEEECChhcC-ChhH
Confidence 44555555444445999999999999999998765 5 999999999999999884 35899999999987 2332
Q ss_pred C------CeeEEEeCcchh
Q 028547 112 G------SFDSVVDKGTLD 124 (207)
Q Consensus 112 ~------~fD~v~~~~~l~ 124 (207)
- ....|+++.++.
T Consensus 107 ~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 107 IARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp GSCSSSSCCEEEEEECCHH
T ss_pred hcccccCCceEEEEccCcc
Confidence 1 234677765544
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.00 E-value=2.4e-10 Score=87.35 Aligned_cols=100 Identities=11% Similarity=0.018 Sum_probs=71.3
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCH-------HHHHHHHHHccCC---CCceEEEeccccccc-cCC--CCee
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISS-------VVIEAMMKKYSNR---PQLKYIKMDVRQMDE-FQT--GSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~-------~~i~~~~~~~~~~---~~~~~~~~d~~~~~~-~~~--~~fD 115 (207)
.+|||+|||+|.++..++..+. +|+++|+++ .+++.++++.... .+++++++|+.+..+ +++ ++||
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred CeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 4999999999999999999876 999999999 9999988765421 349999999988532 333 6899
Q ss_pred EEEeCcchhhhccCC-------------CChhhHHHHHHHHHHhcCC
Q 028547 116 SVVDKGTLDSLLCGS-------------NSRQNATQMLKEVWRVLKD 149 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~-------------~~~~~~~~~l~~~~~~L~p 149 (207)
+|+++.++.+..... ....+...+++.+.++.+.
T Consensus 164 ~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~ 210 (258)
T 2r6z_A 164 IVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK 210 (258)
T ss_dssp EEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS
T ss_pred EEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc
Confidence 999987665421000 0112456667777777643
No 270
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.99 E-value=7.9e-10 Score=84.14 Aligned_cols=84 Identities=15% Similarity=0.206 Sum_probs=62.7
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCc--EEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCC---
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYED--VVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQT--- 111 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~--v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~--- 111 (207)
..+++.....++.+|||+|||+|.++. +.. +. + |+++|+++.+++.+++++....+++++++|+.+. +++.
T Consensus 11 ~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~-~~~~~~~ 86 (252)
T 1qyr_A 11 DSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTF-NFGELAE 86 (252)
T ss_dssp HHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGC-CHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhC-CHHHhhc
Confidence 445555444444599999999999999 654 43 6 9999999999999999876545899999999986 2321
Q ss_pred --CCeeEEEeCcchh
Q 028547 112 --GSFDSVVDKGTLD 124 (207)
Q Consensus 112 --~~fD~v~~~~~l~ 124 (207)
+..+.|+++.++.
T Consensus 87 ~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 87 KMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHTSCEEEEEECCTT
T ss_pred ccCCceEEEECCCCC
Confidence 2347888876644
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.95 E-value=1.6e-09 Score=84.38 Aligned_cols=87 Identities=16% Similarity=0.272 Sum_probs=67.6
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccc-cC--
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDE-FQ-- 110 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~-~~-- 110 (207)
+..+++.+..+++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .++.++++|+.++.. ..
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~ 94 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTL 94 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHT
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhc
Confidence 4556665555555599999999999999999874 249999999999999999987643 589999999887621 11
Q ss_pred -CCCeeEEEeCcc
Q 028547 111 -TGSFDSVVDKGT 122 (207)
Q Consensus 111 -~~~fD~v~~~~~ 122 (207)
..+||.|++...
T Consensus 95 g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 95 GIEKVDGILMDLG 107 (301)
T ss_dssp TCSCEEEEEEECS
T ss_pred CCCCCCEEEEcCc
Confidence 258999997543
No 272
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.93 E-value=5.4e-09 Score=90.36 Aligned_cols=110 Identities=12% Similarity=0.082 Sum_probs=78.5
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcC-------------------------------------------CCcEEEEeCCHHH
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDG-------------------------------------------YEDVVNVDISSVV 82 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~-------------------------------------------~~~v~~~D~s~~~ 82 (207)
+...+|||++||+|.+++.++..+ ...++|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 344599999999999998877642 1379999999999
Q ss_pred HHHHHHHccCC---CCceEEEeccccccc-cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHH---HHhcCCCcEEEE
Q 028547 83 IEAMMKKYSNR---PQLKYIKMDVRQMDE-FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEV---WRVLKDKGVYIL 155 (207)
Q Consensus 83 i~~~~~~~~~~---~~~~~~~~d~~~~~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~---~~~L~pgG~~~~ 155 (207)
++.|+.++... ..+.|.+.|+.+..+ ...++||+|+++.++..- .........+.+.+ .+.+.|||.+++
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~R---lg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER---LDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC------CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcccc---ccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 99999987632 248999999998732 223389999999887521 11223444455544 445568999998
Q ss_pred EEe
Q 028547 156 VTY 158 (207)
Q Consensus 156 ~~~ 158 (207)
.+.
T Consensus 346 lt~ 348 (703)
T 3v97_A 346 FSA 348 (703)
T ss_dssp EES
T ss_pred EeC
Confidence 873
No 273
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.90 E-value=2.3e-10 Score=86.96 Aligned_cols=121 Identities=12% Similarity=0.026 Sum_probs=74.7
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCC
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 113 (207)
.+.++.+.+.-++..+|||||||+|.+++.+++. +...++|+|+...+...+...-....++.+...++... .++..+
T Consensus 78 KL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~-~l~~~~ 156 (282)
T 3gcz_A 78 KLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVF-NMEVIP 156 (282)
T ss_dssp HHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGG-GSCCCC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchh-hcCCCC
Confidence 3556666655455559999999999999998865 44588999997642111100000012333333222212 346688
Q ss_pred eeEEEeCcchhhhccCCC--ChhhHHHHHHHHHHhcCCC--cEEEEEEeC
Q 028547 114 FDSVVDKGTLDSLLCGSN--SRQNATQMLKEVWRVLKDK--GVYILVTYG 159 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~L~pg--G~~~~~~~~ 159 (207)
+|+|+|....+ - +.. .......+++-+.++|+|| |.|++-.|.
T Consensus 157 ~DvVLSDmApn-s--G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 157 GDTLLCDIGES-S--PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CSEEEECCCCC-C--SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred cCEEEecCccC-C--CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 99999987655 1 111 1112223577778999999 999998887
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.90 E-value=7.5e-10 Score=84.36 Aligned_cols=76 Identities=12% Similarity=-0.029 Sum_probs=58.3
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc-------C---C-CCceEEEeccccccccCCCCeeEE
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS-------N---R-PQLKYIKMDVRQMDEFQTGSFDSV 117 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~-------~---~-~~~~~~~~d~~~~~~~~~~~fD~v 117 (207)
.+|||+|||+|..+..++..+. +|+++|+++.+...++.++. . . .+++++++|..+..+...++||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 4999999999999999999877 89999999976555444321 1 1 368899999988633223479999
Q ss_pred EeCcchhh
Q 028547 118 VDKGTLDS 125 (207)
Q Consensus 118 ~~~~~l~~ 125 (207)
++..++..
T Consensus 169 ~lDP~y~~ 176 (258)
T 2oyr_A 169 YLDPMFPH 176 (258)
T ss_dssp EECCCCCC
T ss_pred EEcCCCCC
Confidence 99877653
No 275
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.89 E-value=2.1e-09 Score=86.85 Aligned_cols=76 Identities=7% Similarity=-0.010 Sum_probs=63.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC----CCCceEEEecccccccc-CCCCeeEEEeCcc
Q 028547 48 HQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN----RPQLKYIKMDVRQMDEF-QTGSFDSVVDKGT 122 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~----~~~~~~~~~d~~~~~~~-~~~~fD~v~~~~~ 122 (207)
+.+|||+|||+|..+..+++.+. +|+++|+++.+++.+++++.. ..+++++++|+.+..+. ..++||+|+++.+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred CCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 34999999999999999998865 999999999999999998762 25799999999985222 2358999999866
Q ss_pred hh
Q 028547 123 LD 124 (207)
Q Consensus 123 l~ 124 (207)
..
T Consensus 173 rr 174 (410)
T 3ll7_A 173 RR 174 (410)
T ss_dssp EC
T ss_pred Cc
Confidence 54
No 276
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.86 E-value=7.5e-09 Score=71.03 Aligned_cols=100 Identities=16% Similarity=0.060 Sum_probs=69.5
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCc-hhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNS-AFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G-~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 113 (207)
+.+.+........ +|||+|||+| ..+..+++ .++ +|+++|+++.++. |++.|+.+...-.-+.
T Consensus 25 LaeYI~~~~~~~~-rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~-------------~v~dDiF~P~~~~Y~~ 89 (153)
T 2k4m_A 25 LAVYIIRCSGPGT-RVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG-------------IVRDDITSPRMEIYRG 89 (153)
T ss_dssp HHHHHHHHSCSSS-EEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT-------------EECCCSSSCCHHHHTT
T ss_pred HHHHHHhcCCCCC-cEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc-------------eEEccCCCCcccccCC
Confidence 4455554444445 9999999999 69999997 777 9999999985443 8889998863111158
Q ss_pred eeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCcc
Q 028547 114 FDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPI 162 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~ 162 (207)
||+|.+..+- .++...+.++++.+. .-+++..++.+.
T Consensus 90 ~DLIYsirPP----------~El~~~i~~lA~~v~--adliI~pL~~E~ 126 (153)
T 2k4m_A 90 AALIYSIRPP----------AEIHSSLMRVADAVG--ARLIIKPLTGED 126 (153)
T ss_dssp EEEEEEESCC----------TTTHHHHHHHHHHHT--CEEEEECBTTBC
T ss_pred cCEEEEcCCC----------HHHHHHHHHHHHHcC--CCEEEEcCCCCc
Confidence 9999864432 344556666665544 677777766654
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.86 E-value=5.8e-09 Score=87.56 Aligned_cols=127 Identities=12% Similarity=-0.015 Sum_probs=84.7
Q ss_pred cCccCHHHHHHh-hCCCCCCcEEEEcCCCchhhHHHHhcC----------------CCcEEEEeCCHHHHHHHHHHcc--
Q 028547 31 QKYPSLAPLIKL-YVPSHHQRILIVGCGNSAFSEGMVDDG----------------YEDVVNVDISSVVIEAMMKKYS-- 91 (207)
Q Consensus 31 ~~~~~~~~~l~~-~~~~~~~~vLdiG~G~G~~~~~l~~~~----------------~~~v~~~D~s~~~i~~~~~~~~-- 91 (207)
.+.+.+..++.. ..+... +|+|.+||+|.++..+++.- ...++|+|+++.++..|+.++.
T Consensus 228 yTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~ 306 (544)
T 3khk_A 228 YTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR 306 (544)
T ss_dssp CCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh
Confidence 333444444443 334444 99999999999988765420 1379999999999999988754
Q ss_pred CC-CCceEEEeccccccccCCCCeeEEEeCcchhhhcc----------------------CCCChhhHHHHHHHHHHhcC
Q 028547 92 NR-PQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLLC----------------------GSNSRQNATQMLKEVWRVLK 148 (207)
Q Consensus 92 ~~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~~~~~~~~l~~~~~~L~ 148 (207)
.. .++.+.++|..........+||+|+++.++..-.. ........-.+++.+.+.|+
T Consensus 307 gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 386 (544)
T 3khk_A 307 GIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLA 386 (544)
T ss_dssp TCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEE
T ss_pred CCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhc
Confidence 21 23334677776653345679999999988863100 00011112368999999999
Q ss_pred CCcEEEEEEe
Q 028547 149 DKGVYILVTY 158 (207)
Q Consensus 149 pgG~~~~~~~ 158 (207)
|||.+.++..
T Consensus 387 ~gGr~aiVlP 396 (544)
T 3khk_A 387 PTGSMALLLA 396 (544)
T ss_dssp EEEEEEEEEE
T ss_pred cCceEEEEec
Confidence 9999888764
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.85 E-value=2.7e-08 Score=83.39 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=81.4
Q ss_pred CCCcEEEEcCCCchhhHHHHhc----CCCcEEEEeCCHHHHHHHHHHcc--CC--CCceEEEecccccc--ccCCCCeeE
Q 028547 47 HHQRILIVGCGNSAFSEGMVDD----GYEDVVNVDISSVVIEAMMKKYS--NR--PQLKYIKMDVRQMD--EFQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~----~~~~v~~~D~s~~~i~~~~~~~~--~~--~~~~~~~~d~~~~~--~~~~~~fD~ 116 (207)
...+|+|.+||+|.++..+.+. +...++|+|+++.++..|+.++. .. .++.+.++|..... ......||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 3349999999999999888775 12489999999999999988754 22 35678888887651 235678999
Q ss_pred EEeCcchhhhccCC----------------CChhhHHHHHHHHHHhcC-CCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGS----------------NSRQNATQMLKEVWRVLK-DKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~----------------~~~~~~~~~l~~~~~~L~-pgG~~~~~~~ 158 (207)
|+++.++..-.... ......-.+++.+.+.|+ +||.+.++..
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 99998875311000 000112358999999999 9999888774
No 279
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.83 E-value=5.5e-08 Score=77.93 Aligned_cols=115 Identities=14% Similarity=0.044 Sum_probs=78.1
Q ss_pred CcEEEEcCCCchhhHHHHhc-----------------CC-CcEEEEeCC-----------HHHHHHHHHHccCCCCceEE
Q 028547 49 QRILIVGCGNSAFSEGMVDD-----------------GY-EDVVNVDIS-----------SVVIEAMMKKYSNRPQLKYI 99 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~-----------------~~-~~v~~~D~s-----------~~~i~~~~~~~~~~~~~~~~ 99 (207)
.+|+|+||++|.++..+... .+ -+|+..|+- +...+.+++......+..|.
T Consensus 54 ~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~ 133 (384)
T 2efj_A 54 FKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLI 133 (384)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEE
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEE
Confidence 48999999999988877664 12 267777876 43444333332221234666
Q ss_pred Eeccccc--cccCCCCeeEEEeCcchhhhccCCCC--------------------------------hhhHHHHHHHHHH
Q 028547 100 KMDVRQM--DEFQTGSFDSVVDKGTLDSLLCGSNS--------------------------------RQNATQMLKEVWR 145 (207)
Q Consensus 100 ~~d~~~~--~~~~~~~fD~v~~~~~l~~~~~~~~~--------------------------------~~~~~~~l~~~~~ 145 (207)
.+....+ ..++.+++|+|+++..+||+.-.+.. ..|...+|+..++
T Consensus 134 ~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~ 213 (384)
T 2efj_A 134 GAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSE 213 (384)
T ss_dssp EECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655543 34789999999999999998533211 1245566888899
Q ss_pred hcCCCcEEEEEEeCCccc
Q 028547 146 VLKDKGVYILVTYGAPIY 163 (207)
Q Consensus 146 ~L~pgG~~~~~~~~~~~~ 163 (207)
.|+|||.+++...+.+..
T Consensus 214 eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 214 ELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HEEEEEEEEEEEECCCTT
T ss_pred HhccCCeEEEEEecCCCc
Confidence 999999999998766543
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.80 E-value=6.5e-08 Score=83.52 Aligned_cols=111 Identities=13% Similarity=0.021 Sum_probs=78.1
Q ss_pred CCcEEEEcCCCchhhHHHHhcC----CCcEEEEeCCHHHHHHH--HHHccC------CCCceEEEeccccccccCCCCee
Q 028547 48 HQRILIVGCGNSAFSEGMVDDG----YEDVVNVDISSVVIEAM--MKKYSN------RPQLKYIKMDVRQMDEFQTGSFD 115 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~~----~~~v~~~D~s~~~i~~~--~~~~~~------~~~~~~~~~d~~~~~~~~~~~fD 115 (207)
+.+|||.|||+|.++..+++.. ..+++|+|+++.+++.| +.++.. .....+...|+..........||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 3499999999999999988763 24899999999999998 444332 12235566666664334567899
Q ss_pred EEEeCcchhhhccC----------------------CCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 116 SVVDKGTLDSLLCG----------------------SNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 116 ~v~~~~~l~~~~~~----------------------~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+|+++.++...... .........+++.+.+.|++||.+.++..
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99999988421000 00011245678899999999999998874
No 281
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.80 E-value=3.6e-08 Score=72.12 Aligned_cols=106 Identities=11% Similarity=0.030 Sum_probs=74.5
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-----CCCceEEEecccccc----
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-----RPQLKYIKMDVRQMD---- 107 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-----~~~~~~~~~d~~~~~---- 107 (207)
.+++...+.+. ++|||+||| .-+.++++...++|+.+|.+++..+.+++++.. ..++.++.+|+.+..
T Consensus 21 ~~~L~~~l~~a-~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~ 97 (202)
T 3cvo_A 21 AEALRMAYEEA-EVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGH 97 (202)
T ss_dssp HHHHHHHHHHC-SEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGC
T ss_pred HHHHHHHhhCC-CEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccc
Confidence 44554444444 499999984 677777775225999999999999999988763 236889999865420
Q ss_pred ----------c--------c-CCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 108 ----------E--------F-QTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 108 ----------~--------~-~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+ . ..++||+|+..+- .....+..+.+.|+|||++++-.
T Consensus 98 p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~------------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 98 PVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR------------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp BSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS------------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred cccchhhhhHHHHhhhhhccccCCCCCEEEEeCC------------CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 1368999996542 22366667789999999997643
No 282
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.79 E-value=1.8e-08 Score=80.19 Aligned_cols=111 Identities=20% Similarity=0.213 Sum_probs=82.4
Q ss_pred CCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC----------CCCceEEEeccccccc---cCCCC
Q 028547 47 HHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN----------RPQLKYIKMDVRQMDE---FQTGS 113 (207)
Q Consensus 47 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~----------~~~~~~~~~d~~~~~~---~~~~~ 113 (207)
++++||-||.|.|..+.++++....+++.||+++..++.+++.++. .++++++..|+.+... -..+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 3469999999999999999987667999999999999999997652 1357899999987521 13568
Q ss_pred eeEEEeCcchhhhcc---CCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLLC---GSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~~---~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
||+|+....-..... +.........+++.+.+.|+|||+++...
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 999997532111100 11122456788999999999999998744
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.76 E-value=9.9e-09 Score=87.22 Aligned_cols=101 Identities=16% Similarity=0.137 Sum_probs=71.7
Q ss_pred CcEEEEcCCCchhhHHHHhc----C----------CCcEEEEeCCHHHHHHHHHHccC-C-CCceEEEeccccccccC--
Q 028547 49 QRILIVGCGNSAFSEGMVDD----G----------YEDVVNVDISSVVIEAMMKKYSN-R-PQLKYIKMDVRQMDEFQ-- 110 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~----~----------~~~v~~~D~s~~~i~~~~~~~~~-~-~~~~~~~~d~~~~~~~~-- 110 (207)
+.|||+|||+|.++...+.. + ..+|++||.++.++..++.+..+ . ..+.++.+|+.+.. .+
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~-lp~~ 489 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLP-GIAK 489 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHH-HHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcc-cccc
Confidence 48999999999997433221 1 13999999999887666655432 2 46999999999983 43
Q ss_pred ---CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 111 ---TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 111 ---~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
.+++|+|++-.+ ..++ ..+-....+..+.+.|+|||+++=
T Consensus 490 ~~~~ekVDIIVSElm-Gsfl----~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 490 DRGFEQPDIIVSELL-GSFG----DNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HTTCCCCSEEEECCC-BTTB----GGGSHHHHHHTTGGGSCTTCEEES
T ss_pred cCCCCcccEEEEecc-cccc----chhccHHHHHHHHHhCCCCcEEEC
Confidence 689999998633 2221 123445677778899999998653
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.76 E-value=7.5e-08 Score=76.64 Aligned_cols=118 Identities=14% Similarity=0.134 Sum_probs=86.7
Q ss_pred CCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC--------CCCceEEEeccccccccCCCCe
Q 028547 44 VPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--------RPQLKYIKMDVRQMDEFQTGSF 114 (207)
Q Consensus 44 ~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~f 114 (207)
.++++.+|||+++|.|.=+..+++.+. ..++++|+++.-+..+++++.. ..++.+...|...+.....+.|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 345555999999999999988888765 4799999999988888776541 1467888889888744567899
Q ss_pred eEEEeCcchhhh--c-cCCCC-------h-------hhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 115 DSVVDKGTLDSL--L-CGSNS-------R-------QNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 115 D~v~~~~~l~~~--~-~~~~~-------~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
|.|++..+...- . ....+ . .....+|..+.+.|||||.++.+|++-.
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 999987654331 0 11110 0 1346788889999999999999997543
No 285
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.72 E-value=1.4e-08 Score=86.14 Aligned_cols=100 Identities=18% Similarity=0.256 Sum_probs=68.8
Q ss_pred CcEEEEcCCCchhhHHHHh---cCCC--cEEEEeCCHHHHHHHHHHccC-C-CCceEEEeccccccccCCCCeeEEEeCc
Q 028547 49 QRILIVGCGNSAFSEGMVD---DGYE--DVVNVDISSVVIEAMMKKYSN-R-PQLKYIKMDVRQMDEFQTGSFDSVVDKG 121 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~---~~~~--~v~~~D~s~~~i~~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~~fD~v~~~~ 121 (207)
..|+|+|||+|.+....++ .+.. +|++||.++.+....+....+ . ..|+++++|+++.. .++++|+|++-
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~--LPEKVDIIVSE- 435 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV--APEKADIIVSE- 435 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC--CSSCEEEEECC-
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc--CCcccCEEEEE-
Confidence 3799999999999554444 3322 789999998665444333222 1 57999999999984 34789999975
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
.+.+++.. +.....+....++|||||+++=
T Consensus 436 wMG~fLl~----E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 436 LLGSFADN----ELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp CCBTTBGG----GCHHHHHHHHGGGEEEEEEEES
T ss_pred cCcccccc----cCCHHHHHHHHHhcCCCcEEcc
Confidence 23333222 2334677788899999998753
No 286
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.67 E-value=1e-08 Score=78.40 Aligned_cols=123 Identities=13% Similarity=0.067 Sum_probs=73.2
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccCCCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQTGS 113 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~ 113 (207)
+.++.+..+.++..+|||+||++|.+++.+++. +...|+|+|+.......... ... ..++.....++.-. .+....
T Consensus 70 L~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~-~l~~~~ 147 (300)
T 3eld_A 70 IRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVF-TMPTEP 147 (300)
T ss_dssp HHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTT-TSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCCceEEeecCceee-ecCCCC
Confidence 444554433344559999999999999999985 44588999987532100000 000 01232232222111 235678
Q ss_pred eeEEEeCcchhhhccCCC--ChhhHHHHHHHHHHhcCCC-cEEEEEEeC--Cccc
Q 028547 114 FDSVVDKGTLDSLLCGSN--SRQNATQMLKEVWRVLKDK-GVYILVTYG--APIY 163 (207)
Q Consensus 114 fD~v~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~L~pg-G~~~~~~~~--~~~~ 163 (207)
+|+|++....+ - +.. .......+++-+.++|+|| |.|++-.|. ++..
T Consensus 148 ~DlVlsD~APn-s--G~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~ 199 (300)
T 3eld_A 148 SDTLLCDIGES-S--SNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDV 199 (300)
T ss_dssp CSEEEECCCCC-C--SSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHH
T ss_pred cCEEeecCcCC-C--CCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccH
Confidence 99999986554 1 111 1112234477778999999 999998887 5543
No 287
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.65 E-value=2.2e-07 Score=74.36 Aligned_cols=113 Identities=16% Similarity=0.156 Sum_probs=73.7
Q ss_pred CcEEEEcCCCchhhHHHHhc------------C---C-CcEEEEeCCHHHHHHHHHHccCC--------------CCceE
Q 028547 49 QRILIVGCGNSAFSEGMVDD------------G---Y-EDVVNVDISSVVIEAMMKKYSNR--------------PQLKY 98 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~------------~---~-~~v~~~D~s~~~i~~~~~~~~~~--------------~~~~~ 98 (207)
.+|+|+||++|.++..+... + + -+|+..|+-.......=+.++.. .+..|
T Consensus 54 ~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f 133 (374)
T 3b5i_A 54 FTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYF 133 (374)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSE
T ss_pred eEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceE
Confidence 48999999999988876331 1 2 26777786554332222222210 01234
Q ss_pred EEeccccc--cccCCCCeeEEEeCcchhhhccCCCC-------------------------------hhhHHHHHHHHHH
Q 028547 99 IKMDVRQM--DEFQTGSFDSVVDKGTLDSLLCGSNS-------------------------------RQNATQMLKEVWR 145 (207)
Q Consensus 99 ~~~d~~~~--~~~~~~~fD~v~~~~~l~~~~~~~~~-------------------------------~~~~~~~l~~~~~ 145 (207)
..+....+ ..++.+++|+|+++.++||+.-.+.. ..|...+|+..++
T Consensus 134 ~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~ 213 (374)
T 3b5i_A 134 VAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAA 213 (374)
T ss_dssp EEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333332 24789999999999999998422210 1277888999999
Q ss_pred hcCCCcEEEEEEeCCc
Q 028547 146 VLKDKGVYILVTYGAP 161 (207)
Q Consensus 146 ~L~pgG~~~~~~~~~~ 161 (207)
.|+|||.+++...+.+
T Consensus 214 eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 214 EVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HEEEEEEEEEEEEECC
T ss_pred HhCCCCEEEEEEecCC
Confidence 9999999999887554
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.64 E-value=3.2e-08 Score=75.41 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=73.0
Q ss_pred CcEEEEcCCCchhhHHHHhc-------CC------CcEEEEeCCH---HHHH-----------HHHHHccC---------
Q 028547 49 QRILIVGCGNSAFSEGMVDD-------GY------EDVVNVDISS---VVIE-----------AMMKKYSN--------- 92 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~-------~~------~~v~~~D~s~---~~i~-----------~~~~~~~~--------- 92 (207)
.+|||+|+|+|..+..+++. .+ .+++++|..+ +.+. .+++.+..
T Consensus 62 ~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~ 141 (257)
T 2qy6_A 62 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 141 (257)
T ss_dssp EEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchh
Confidence 49999999999988776542 22 3899999876 4433 33333211
Q ss_pred -------CCCceEEEeccccccccCC----CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 93 -------RPQLKYIKMDVRQMDEFQT----GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 93 -------~~~~~~~~~d~~~~~~~~~----~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
..+++++.+|+.+..+... ..||+|+..+ +....+++-....+++.+++.|+|||+|+ +|+..
T Consensus 142 r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~----fsp~~~p~lw~~~~l~~l~~~L~pGG~l~--tysaa 215 (257)
T 2qy6_A 142 RLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG----FAPAKNPDMWTQNLFNAMARLARPGGTLA--TFTSA 215 (257)
T ss_dssp EEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS----SCTTTCGGGCCHHHHHHHHHHEEEEEEEE--ESCCB
T ss_pred heeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC----CCcccChhhcCHHHHHHHHHHcCCCcEEE--EEeCC
Confidence 1357788999988533222 2799999653 21111122235789999999999999987 45554
Q ss_pred ccccccc
Q 028547 162 IYRLGML 168 (207)
Q Consensus 162 ~~~~~~~ 168 (207)
....+.+
T Consensus 216 ~~vrr~L 222 (257)
T 2qy6_A 216 GFVRRGL 222 (257)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4433333
No 289
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.61 E-value=1.5e-07 Score=74.76 Aligned_cols=114 Identities=12% Similarity=0.094 Sum_probs=81.7
Q ss_pred CcEEEEcCCCchhhHHHHhc---------------C-C-CcEEEEeCCHHHHHHHHHHccCC---CCceEEEeccccc--
Q 028547 49 QRILIVGCGNSAFSEGMVDD---------------G-Y-EDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQM-- 106 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~---------------~-~-~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~-- 106 (207)
-+|+|+||++|..+..+... . + -+|+..|........+-+.++.. .+..|..+....+
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 38999999999888766554 1 2 27788898776666665555421 1335555544443
Q ss_pred cccCCCCeeEEEeCcchhhhccCCCC--------------------------hhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 107 DEFQTGSFDSVVDKGTLDSLLCGSNS--------------------------RQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 107 ~~~~~~~fD~v~~~~~l~~~~~~~~~--------------------------~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
..++.+++|+|+++..+||+.-.+.. .+|...+|+..++.|+|||.+++...+.
T Consensus 133 rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 133 RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 34789999999999999998532211 2478888999999999999999988755
Q ss_pred cc
Q 028547 161 PI 162 (207)
Q Consensus 161 ~~ 162 (207)
+.
T Consensus 213 ~~ 214 (359)
T 1m6e_X 213 RS 214 (359)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.55 E-value=4.4e-07 Score=69.33 Aligned_cols=82 Identities=12% Similarity=0.237 Sum_probs=66.8
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc----cCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE----FQT 111 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~----~~~ 111 (207)
+.+.++.+..+++..+||.+||.|..+..+++.+. .|+|+|.++.+++.+++ +.. .++.+++.++.++.. ...
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g-~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILERGG-RVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHHHHHHHTTC
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCC-EEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHHHHHHHcCC
Confidence 45677766555555999999999999999999844 99999999999999999 766 689999999988632 123
Q ss_pred CCeeEEEeC
Q 028547 112 GSFDSVVDK 120 (207)
Q Consensus 112 ~~fD~v~~~ 120 (207)
+++|.|++.
T Consensus 88 ~~vDgIL~D 96 (285)
T 1wg8_A 88 ERVDGILAD 96 (285)
T ss_dssp SCEEEEEEE
T ss_pred CCcCEEEeC
Confidence 579999975
No 291
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.52 E-value=3.9e-07 Score=68.33 Aligned_cols=115 Identities=12% Similarity=0.029 Sum_probs=70.1
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCC-CCc---eEEEe-cccccccc
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNR-PQL---KYIKM-DVRQMDEF 109 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~-~~~---~~~~~-d~~~~~~~ 109 (207)
+.++.+..+-+++.+|||+||+.|.+++.+++.. ...|.|.++..+. . . .-.... .++ .|.++ |+.+.
T Consensus 62 L~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~-~P~~~~~~Gv~~i~~~~G~Df~~~--- 135 (269)
T 2px2_A 62 LRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-E-EPMLMQSYGWNIVTMKSGVDVFYK--- 135 (269)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-C-CCCCCCSTTGGGEEEECSCCGGGS---
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-c-CCCcccCCCceEEEeeccCCccCC---
Confidence 5555555555655699999999999999998862 1233444443321 0 0 001111 233 34445 88875
Q ss_pred CCCCeeEEEeCcchhhhccCCCChhhHH---HHHHHHHHhcCCCc-EEEEEEeCC
Q 028547 110 QTGSFDSVVDKGTLDSLLCGSNSRQNAT---QMLKEVWRVLKDKG-VYILVTYGA 160 (207)
Q Consensus 110 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~---~~l~~~~~~L~pgG-~~~~~~~~~ 160 (207)
...++|+|+|...-. ++.. ..|.. .+++-+.++|+||| .|++-.|.+
T Consensus 136 ~~~~~DvVLSDMAPn---SG~~-~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 136 PSEISDTLLCDIGES---SPSA-EIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CCCCCSEEEECCCCC---CSCH-HHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCCCCCEEEeCCCCC---CCcc-HHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 346799999975432 2211 11222 25666779999999 999988875
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.41 E-value=1.1e-06 Score=67.59 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=74.8
Q ss_pred CCcEEEEcCCCchhhHHHHhc----C--CCcEEEEeCCHH--------------------------HHHHHHHHccC---
Q 028547 48 HQRILIVGCGNSAFSEGMVDD----G--YEDVVNVDISSV--------------------------VIEAMMKKYSN--- 92 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~~~----~--~~~v~~~D~s~~--------------------------~i~~~~~~~~~--- 92 (207)
++.|||+|+..|.-+..++.. + ..+++++|..+. .++.+++++..
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 349999999999988877653 1 248999996421 24556666552
Q ss_pred -CCCceEEEeccccccc-cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 93 -RPQLKYIKMDVRQMDE-FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 93 -~~~~~~~~~d~~~~~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
..+++++.+++.+..+ .+.++||+|+...-.. ......++.+.+.|+|||++++-.+.
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y---------~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY---------ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH---------HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc---------ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 2579999999987533 3457899999764321 45568899999999999999987653
No 293
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.40 E-value=1.9e-06 Score=68.43 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=55.8
Q ss_pred CCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 46 SHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 46 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
+++.+|||+||++|.++..+++.+. .|++||+.+-. . .+...+++.+++.|+.... ....++|+|+|.....
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~-~----~l~~~~~V~~~~~d~~~~~-~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMA-Q----SLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEK 281 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCC-H----HHHTTTCEEEECSCTTTCC-CCSSCEEEEEECCSSC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcC-h----hhccCCCeEEEeCcccccc-CCCCCcCEEEEcCCCC
Confidence 3445999999999999999999986 99999986521 1 1223368999999999884 3457899999986544
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.35 E-value=2.4e-06 Score=63.20 Aligned_cols=120 Identities=14% Similarity=0.106 Sum_probs=78.0
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHH-ccCCCCceEEEe-ccccccccCC
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKK-YSNRPQLKYIKM-DVRQMDEFQT 111 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~-~~~~~~~~~~~~-d~~~~~~~~~ 111 (207)
.+.++.+.+.-++..+|||+||++|.+++.++.. +...|+++|+...-.+.-+-. ......+.|... |+.... .
T Consensus 66 KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~---~ 142 (267)
T 3p8z_A 66 KLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP---P 142 (267)
T ss_dssp HHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC---C
T ss_pred HHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC---C
Confidence 3556666665555569999999999999977776 446899999876321000000 001257889998 987663 3
Q ss_pred CCeeEEEeCcchhhhccCCCChhhH---HHHHHHHHHhcCCCcEEEEEEeCCcc
Q 028547 112 GSFDSVVDKGTLDSLLCGSNSRQNA---TQMLKEVWRVLKDKGVYILVTYGAPI 162 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~~~~~~~~~~---~~~l~~~~~~L~pgG~~~~~~~~~~~ 162 (207)
.++|.|+|...- +..++..+. ...|+-+.++|++ |.|.+-.+++..
T Consensus 143 ~~~DtllcDIge----Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 143 EKCDTLLCDIGE----SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CCCSEEEECCCC----CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred ccccEEEEecCC----CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 679999987321 111222233 3356666899998 899998876655
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.35 E-value=9.3e-07 Score=67.46 Aligned_cols=117 Identities=14% Similarity=0.121 Sum_probs=74.9
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHH--HHccCCCCceEEEe-ccccccccCC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMM--KKYSNRPQLKYIKM-DVRQMDEFQT 111 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~--~~~~~~~~~~~~~~-d~~~~~~~~~ 111 (207)
+.++.+...-+...+||||||++|.++..++.. +...|+|+|+...--+.-+ +.+ ....+.|... |+..+. .
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql-~w~lV~~~~~~Dv~~l~---~ 158 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSY-GWNIVTMKSGVDVFYRP---S 158 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBT-TGGGEEEECSCCTTSSC---C
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhc-CCcceEEEeccCHhhCC---C
Confidence 555666555455559999999999999977776 4468999998763110000 000 1123667765 776663 3
Q ss_pred CCeeEEEeCcchhhhccCCCChhhH---HHHHHHHHHhcCCC-cEEEEEEeCC
Q 028547 112 GSFDSVVDKGTLDSLLCGSNSRQNA---TQMLKEVWRVLKDK-GVYILVTYGA 160 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~~~~~~~~~~---~~~l~~~~~~L~pg-G~~~~~~~~~ 160 (207)
.++|+|+|.-. . +...+..+. ...|+-+.++|+++ |.|.+-.+++
T Consensus 159 ~~~D~ivcDig-e---Ss~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 ECCDTLLCDIG-E---SSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCSEEEECCC-C---CCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCEEEEECc-c---CCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 67999998733 2 222222233 33666668999998 9999988777
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.35 E-value=6.9e-06 Score=68.84 Aligned_cols=130 Identities=11% Similarity=0.099 Sum_probs=83.0
Q ss_pred eecCccCHHHHHH-hhCCCCCCcEEEEcCCCchhhHHHHhc----C----------CCcEEEEeCCHHHHHHHHHHcc--
Q 028547 29 WYQKYPSLAPLIK-LYVPSHHQRILIVGCGNSAFSEGMVDD----G----------YEDVVNVDISSVVIEAMMKKYS-- 91 (207)
Q Consensus 29 ~~~~~~~~~~~l~-~~~~~~~~~vLdiG~G~G~~~~~l~~~----~----------~~~v~~~D~s~~~i~~~~~~~~-- 91 (207)
.+.+.+.+..++- ...+..+.+|+|.+||+|.++..+.+. . ...++|+|+++.+...|+-++.
T Consensus 198 qfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh 277 (530)
T 3ufb_A 198 EFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH 277 (530)
T ss_dssp CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH
T ss_pred eECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc
Confidence 3444444555443 444444459999999999998776542 1 1369999999999998887643
Q ss_pred CCCCceEEEeccccc---cccCCCCeeEEEeCcchhhhc---------cCCCChhhHHHHHHHHHHhcC-------CCcE
Q 028547 92 NRPQLKYIKMDVRQM---DEFQTGSFDSVVDKGTLDSLL---------CGSNSRQNATQMLKEVWRVLK-------DKGV 152 (207)
Q Consensus 92 ~~~~~~~~~~d~~~~---~~~~~~~fD~v~~~~~l~~~~---------~~~~~~~~~~~~l~~~~~~L~-------pgG~ 152 (207)
......+..+|.... .......||+|+++.++..-. ...........+++.+.+.|+ +||.
T Consensus 278 g~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr 357 (530)
T 3ufb_A 278 GLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGR 357 (530)
T ss_dssp TCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCE
T ss_pred CCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCce
Confidence 223456677776653 112345799999999884210 000111233457778888886 6999
Q ss_pred EEEEEe
Q 028547 153 YILVTY 158 (207)
Q Consensus 153 ~~~~~~ 158 (207)
+.++..
T Consensus 358 ~avVlP 363 (530)
T 3ufb_A 358 AAVVVP 363 (530)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888763
No 297
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.06 E-value=3.8e-05 Score=58.71 Aligned_cols=98 Identities=9% Similarity=0.031 Sum_probs=67.5
Q ss_pred CcEEEEcC------CCchhhHHHHhcCC--CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeC
Q 028547 49 QRILIVGC------GNSAFSEGMVDDGY--EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDK 120 (207)
Q Consensus 49 ~~vLdiG~------G~G~~~~~l~~~~~--~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~ 120 (207)
.+|||+|+ .+|.. .+.+.+. +.++++|+.+ +....+ .++++|..+.. ...+||+|++.
T Consensus 111 mrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~---------~~sda~-~~IqGD~~~~~--~~~k~DLVISD 176 (344)
T 3r24_A 111 MRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLND---------FVSDAD-STLIGDCATVH--TANKWDLIISD 176 (344)
T ss_dssp CEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSC---------CBCSSS-EEEESCGGGEE--ESSCEEEEEEC
T ss_pred CEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcc---------cccCCC-eEEEccccccc--cCCCCCEEEec
Confidence 49999996 56763 3333333 2899999977 222223 56999987753 45889999998
Q ss_pred cchhhhccCC------CChhhHHHHHHHHHHhcCCCcEEEEEEeCCcc
Q 028547 121 GTLDSLLCGS------NSRQNATQMLKEVWRVLKDKGVYILVTYGAPI 162 (207)
Q Consensus 121 ~~l~~~~~~~------~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~ 162 (207)
..-.. ++. ....-.+.+++-+.+.|+|||.|++-.|.+..
T Consensus 177 MAPNt--TG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 177 MYDPR--TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp CCCTT--SCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred CCCCc--CCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 55432 221 12335777888889999999999999886665
No 298
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.06 E-value=4.7e-06 Score=63.73 Aligned_cols=104 Identities=7% Similarity=-0.033 Sum_probs=82.3
Q ss_pred cEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc---cCCCCeeEEEeCcchhhh
Q 028547 50 RILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE---FQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~v~~~~~l~~~ 126 (207)
.+||+=+|||.++.++...+ .+++.+|.++..++..++++....++++++.|...... -+...||+|++..++..-
T Consensus 94 ~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~k 172 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERK 172 (283)
T ss_dssp SSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCST
T ss_pred CceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCCC
Confidence 78999999999999999965 69999999999999999998766679999999766311 134579999998877632
Q ss_pred ccCCCChhhHHHHHHHHHH--hcCCCcEEEEEEeCCc
Q 028547 127 LCGSNSRQNATQMLKEVWR--VLKDKGVYILVTYGAP 161 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~--~L~pgG~~~~~~~~~~ 161 (207)
.+...+++.+.+ .+.|+|++++-.....
T Consensus 173 -------~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 173 -------EEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp -------THHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred -------cHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 466777777655 5678999998764333
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.96 E-value=1.6e-05 Score=61.74 Aligned_cols=54 Identities=9% Similarity=0.115 Sum_probs=44.2
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS 91 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~ 91 (207)
+..++..... ++..|||++||+|..+..+++.|. +++|+|+++.+++.+++++.
T Consensus 225 ~~~~i~~~~~-~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 225 AERLVRMFSF-VGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp HHHHHHHHCC-TTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHH
Confidence 3344444443 334999999999999999999876 99999999999999999875
No 300
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.77 E-value=5.4e-05 Score=59.24 Aligned_cols=86 Identities=13% Similarity=0.152 Sum_probs=65.4
Q ss_pred CHHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhc-CC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---
Q 028547 35 SLAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDD-GY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF--- 109 (207)
Q Consensus 35 ~~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~--- 109 (207)
.+.+.++.+..+++..++|..||.|..+..+++. +. ..|+|+|.++.+++.++ ++. ..++.+++.++.++...
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~-~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID-DPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC-CTTEEEEESCGGGHHHHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc-CCcEEEEeCCHHHHHHHHHh
Confidence 4566777766565569999999999999999886 33 58999999999999994 553 36899999998886221
Q ss_pred -C-CCCeeEEEeCcc
Q 028547 110 -Q-TGSFDSVVDKGT 122 (207)
Q Consensus 110 -~-~~~fD~v~~~~~ 122 (207)
. .+++|.|+...-
T Consensus 123 ~g~~~~vDgILfDLG 137 (347)
T 3tka_A 123 RDLIGKIDGILLDLG 137 (347)
T ss_dssp TTCTTCEEEEEEECS
T ss_pred cCCCCcccEEEECCc
Confidence 1 136999987633
No 301
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.71 E-value=0.00029 Score=54.60 Aligned_cols=113 Identities=18% Similarity=0.194 Sum_probs=71.7
Q ss_pred cEEEEcCCCchhhHHHH----hcCC-C--cEEEEeCCH------------HHHHHHHHHccC--C--CCceEEEeccccc
Q 028547 50 RILIVGCGNSAFSEGMV----DDGY-E--DVVNVDISS------------VVIEAMMKKYSN--R--PQLKYIKMDVRQM 106 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~----~~~~-~--~v~~~D~s~------------~~i~~~~~~~~~--~--~~~~~~~~d~~~~ 106 (207)
+|||+|.|+|....... +.+. . +++.+|..+ +..+........ . ..+.+..+|+.+.
T Consensus 99 ~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~ 178 (308)
T 3vyw_A 99 RILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARKR 178 (308)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHHH
T ss_pred EEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHHH
Confidence 89999999998654322 2222 1 566776421 122222222221 1 2356777888875
Q ss_pred cc-cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCcccccccc
Q 028547 107 DE-FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPIYRLGML 168 (207)
Q Consensus 107 ~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~ 168 (207)
.+ +....||+|+ ++.+.+..+++-....+++.++++++|||+|. ||+..+...+-+
T Consensus 179 l~~l~~~~~Da~f----lDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la--TYtaag~VRR~L 235 (308)
T 3vyw_A 179 IKEVENFKADAVF----HDAFSPYKNPELWTLDFLSLIKERIDEKGYWV--SYSSSLSVRKSL 235 (308)
T ss_dssp GGGCCSCCEEEEE----ECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE--ESCCCHHHHHHH
T ss_pred HhhhcccceeEEE----eCCCCcccCcccCCHHHHHHHHHHhCCCcEEE--EEeCcHHHHHHH
Confidence 33 3445799999 45554555666677899999999999999886 776666655555
No 302
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.70 E-value=0.00033 Score=55.09 Aligned_cols=74 Identities=16% Similarity=0.174 Sum_probs=61.4
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
.+|+|+.||.|.++..+...|+..+.++|+++.+++..+.++.... +.|+.+..+.....+|+|+...+...++
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~-----~~Di~~~~~~~~~~~D~l~~gpPCQ~fS 85 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP-----EGDITQVNEKTIPDHDILCAGFPCQAFS 85 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC-----BSCGGGSCGGGSCCCSEEEEECCCTTTC
T ss_pred CcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC-----cCCHHHcCHhhCCCCCEEEECCCCCCcc
Confidence 3899999999999999999998788999999999999999986532 6888886433334699999998888775
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.68 E-value=0.00016 Score=57.41 Aligned_cols=71 Identities=11% Similarity=0.049 Sum_probs=56.0
Q ss_pred CHHHHHHhhCCC------CCCcEEEEcCCCchhhHHHHhcC-CCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc
Q 028547 35 SLAPLIKLYVPS------HHQRILIVGCGNSAFSEGMVDDG-YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM 106 (207)
Q Consensus 35 ~~~~~l~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~ 106 (207)
.+..+++..... .+..|||||.|.|.++..+++.. ..+++++|+++..+...++.+ ...++.++.+|+.++
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EGSPLQILKRDPYDW 117 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TTSSCEEECSCTTCH
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cCCCEEEEECCccch
Confidence 445566554322 12489999999999999999862 458999999999999998877 346899999999765
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.65 E-value=0.00044 Score=55.41 Aligned_cols=75 Identities=13% Similarity=0.251 Sum_probs=62.3
Q ss_pred cEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc--c-----CCCCeeEEEeCcc
Q 028547 50 RILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE--F-----QTGSFDSVVDKGT 122 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~--~-----~~~~fD~v~~~~~ 122 (207)
+|+|+.||.|.++..+.+.|+..+.++|+++.+++..+.++. +..+++.|+.+... + ....+|+|+...+
T Consensus 4 ~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~---~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP---RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT---TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred eEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC---CCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 899999999999999999998678899999999999998874 56788899988632 1 2467999999888
Q ss_pred hhhhc
Q 028547 123 LDSLL 127 (207)
Q Consensus 123 l~~~~ 127 (207)
...++
T Consensus 81 CQ~fS 85 (376)
T 3g7u_A 81 CQGFS 85 (376)
T ss_dssp CCTTC
T ss_pred CCCcc
Confidence 76654
No 305
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.56 E-value=2.1e-05 Score=76.46 Aligned_cols=101 Identities=18% Similarity=0.158 Sum_probs=49.6
Q ss_pred CcEEEEcCCCchhhHHHHhc-C-----CCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 49 QRILIVGCGNSAFSEGMVDD-G-----YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~-~-----~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
.+|||+|.|+|..+..+.+. + +.+++..|+|+...+.+++++... ++.....|..+..++...+||+|++.++
T Consensus 1242 ~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1242 MKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-HVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-TEEEECCCSSCCCC-----CCEEEEECC
T ss_pred ceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-ccccccccccccccCCCCceeEEEEccc
Confidence 49999999999776654432 1 247889999987776666655321 1222112322211234567999999999
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+|.. .+....+.+++++|+|||.+++..
T Consensus 1321 l~~t-------~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1321 LATL-------GDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ---------------------------CCEEEEEE
T ss_pred cccc-------ccHHHHHHHHHHhcCCCcEEEEEe
Confidence 9866 678889999999999999988764
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.53 E-value=0.00023 Score=56.40 Aligned_cols=75 Identities=15% Similarity=0.260 Sum_probs=58.0
Q ss_pred cEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc--cCCCCeeEEEeCcchhh
Q 028547 50 RILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE--FQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~fD~v~~~~~l~~ 125 (207)
+|+|+.||.|.++..+...| +..+.++|+++.+++..+.++. +..+++.|+.+..+ ++...+|+++...+.+.
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~ 80 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---HTQLLAKTIEGITLEEFDRLSFDMILMSPPCQP 80 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---TSCEECSCGGGCCHHHHHHHCCSEEEECCC---
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---ccccccCCHHHccHhHcCcCCcCEEEEcCCCcc
Confidence 89999999999999999988 4579999999999999999985 34578889988732 12226899999988776
Q ss_pred hc
Q 028547 126 LL 127 (207)
Q Consensus 126 ~~ 127 (207)
++
T Consensus 81 fS 82 (343)
T 1g55_A 81 FT 82 (343)
T ss_dssp --
T ss_pred hh
Confidence 64
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.49 E-value=0.00027 Score=53.72 Aligned_cols=55 Identities=9% Similarity=0.082 Sum_probs=44.8
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~ 92 (207)
+..++.....+.. .|||..||+|..+....+.|- +++|+|+++..++.+++++..
T Consensus 202 ~~~~i~~~~~~~~-~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 202 IERIIRASSNPND-LVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHHCCTTC-EEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCC-EEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHh
Confidence 3344555444444 999999999999999998876 999999999999999998753
No 308
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.45 E-value=0.0014 Score=51.46 Aligned_cols=74 Identities=14% Similarity=0.207 Sum_probs=62.6
Q ss_pred cEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 50 RILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
+|||+-||.|.++.-+.+.|+..+.++|+++.+.+..+.++.. .++..|+.+..+..-...|+++...+.+.++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~----~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS 75 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA----KLIKGDISKISSDEFPKCDGIIGGPPSQSWS 75 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCS----EEEESCGGGCCGGGSCCCSEEECCCCGGGTE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCC----CcccCChhhCCHhhCCcccEEEecCCCCCcC
Confidence 7999999999999999888987788999999999999988743 6788999987543445789999998888775
No 309
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.33 E-value=0.0021 Score=50.68 Aligned_cols=117 Identities=11% Similarity=0.159 Sum_probs=80.3
Q ss_pred HHHHHHhhCC-CCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccC---------------------
Q 028547 36 LAPLIKLYVP-SHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSN--------------------- 92 (207)
Q Consensus 36 ~~~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~--------------------- 92 (207)
+...+..++. .+...|+.+|||.......+...+. ..++-+|. |+.++.-++.+..
T Consensus 85 iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~ 163 (334)
T 1rjd_A 85 IDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFL 163 (334)
T ss_dssp HHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEE
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccc
Confidence 3344444443 2234999999999988888877532 25666665 6666665554332
Q ss_pred --CCCceEEEecccccc-------cc-CCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 93 --RPQLKYIKMDVRQMD-------EF-QTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 93 --~~~~~~~~~d~~~~~-------~~-~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
..+..++.+|+.+.. .. ......++++-+++.++ +++....+++.+.+.. |+|.+++.+..
T Consensus 164 ~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL-----~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 164 IDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYM-----HNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp EECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGS-----CHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCC-----CHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 147889999998741 11 22456889999999998 7889999999999887 77877655543
No 310
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.96 E-value=0.0094 Score=46.04 Aligned_cols=76 Identities=21% Similarity=0.167 Sum_probs=61.3
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCc--EEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc--cC-CCCeeEEEeCcch
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYED--VVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE--FQ-TGSFDSVVDKGTL 123 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~--v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~--~~-~~~fD~v~~~~~l 123 (207)
.+|+|+-||.|.++.-+.+.|+.. +.++|+++.+.+..+.++. ...+...|+.+..+ ++ ...+|+++...+.
T Consensus 17 ~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~---~~~~~~~DI~~i~~~~i~~~~~~Dll~ggpPC 93 (295)
T 2qrv_A 17 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ---GKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPC 93 (295)
T ss_dssp EEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT---TCEEEECCGGGCCHHHHHHTCCCSEEEECCCC
T ss_pred CEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC---CCceeCCChHHccHHHhcccCCcCEEEecCCC
Confidence 399999999999999999888743 6899999999998888864 34678889988732 11 2469999999888
Q ss_pred hhhc
Q 028547 124 DSLL 127 (207)
Q Consensus 124 ~~~~ 127 (207)
..++
T Consensus 94 Q~fS 97 (295)
T 2qrv_A 94 NDLS 97 (295)
T ss_dssp GGGB
T ss_pred cccc
Confidence 8876
No 311
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.91 E-value=0.0035 Score=51.76 Aligned_cols=78 Identities=12% Similarity=0.112 Sum_probs=62.1
Q ss_pred cEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc----------------CCCC
Q 028547 50 RILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF----------------QTGS 113 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~----------------~~~~ 113 (207)
+++|+-||.|.++.-+.+.|+..+.++|+++.+.+..+.++...+...+++.|+.+.... ....
T Consensus 90 ~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~~~~ 169 (482)
T 3me5_A 90 RFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIPE 169 (482)
T ss_dssp EEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHHHSCC
T ss_pred eEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhhcCCC
Confidence 899999999999999988888678999999999999998885445567788888876311 1246
Q ss_pred eeEEEeCcchhhhc
Q 028547 114 FDSVVDKGTLDSLL 127 (207)
Q Consensus 114 fD~v~~~~~l~~~~ 127 (207)
+|+++...+...++
T Consensus 170 ~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 170 HDVLLAGFPCQPFS 183 (482)
T ss_dssp CSEEEEECCCCCC-
T ss_pred CCEEEecCCCcchh
Confidence 89999887777664
No 312
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.90 E-value=0.021 Score=44.38 Aligned_cols=117 Identities=13% Similarity=0.078 Sum_probs=79.7
Q ss_pred HHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc-----CCCCceEEEecccccc--c--
Q 028547 38 PLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS-----NRPQLKYIKMDVRQMD--E-- 108 (207)
Q Consensus 38 ~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~-----~~~~~~~~~~d~~~~~--~-- 108 (207)
..++.++......|++||||-=.....+.......++=+| .|..++..++.+. ...+..++.+|+.+.. .
T Consensus 93 ~~v~~~~~~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~ 171 (310)
T 2uyo_A 93 TYFNNAVIDGIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALR 171 (310)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHhCCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHH
Confidence 3343443333348999999975554444422113788888 5888888877765 2357888889987620 0
Q ss_pred ---cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 109 ---FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 109 ---~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
+....-=++++-++++++ +.+....+++.+...+.||+.+++.....
T Consensus 172 ~~g~d~~~Pt~~i~Egvl~Yl-----~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 172 SAGFDPSARTAWLAEGLLMYL-----PATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp HTTCCTTSCEEEEECSCGGGS-----CHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred hccCCCCCCEEEEEechHhhC-----CHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 112334578888899988 66788999999999988988888766543
No 313
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.81 E-value=0.0033 Score=49.37 Aligned_cols=73 Identities=5% Similarity=0.095 Sum_probs=58.4
Q ss_pred cEEEEcCCCchhhHHHHhcCC--CcE-EEEeCCHHHHHHHHHHccCCCCceEEEeccccccc--cCCCCeeEEEeCcchh
Q 028547 50 RILIVGCGNSAFSEGMVDDGY--EDV-VNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE--FQTGSFDSVVDKGTLD 124 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~--~~v-~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~fD~v~~~~~l~ 124 (207)
+++|+.||.|.++.-+.+.|. ..+ .++|+++.+.+..+.+++.. ++..|+.+..+ ++...+|+++...+..
T Consensus 12 ~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 12 NVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----VQVKNLDSISIKQIESLNCNTWFMSPPCQ 87 (327)
T ss_dssp EEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----CBCCCTTTCCHHHHHHTCCCEEEECCCCT
T ss_pred EEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----cccCChhhcCHHHhccCCCCEEEecCCcc
Confidence 899999999999999988884 456 79999999999999998652 56778887632 2233689999988877
Q ss_pred hh
Q 028547 125 SL 126 (207)
Q Consensus 125 ~~ 126 (207)
.+
T Consensus 88 ~f 89 (327)
T 3qv2_A 88 PY 89 (327)
T ss_dssp TC
T ss_pred Cc
Confidence 65
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.75 E-value=0.017 Score=43.56 Aligned_cols=106 Identities=9% Similarity=0.072 Sum_probs=71.4
Q ss_pred CCCCCCcEEEEcCCCchhhHHHHhc-------CC-CcEEEEe-----CCH----------------------HHHHHHH-
Q 028547 44 VPSHHQRILIVGCGNSAFSEGMVDD-------GY-EDVVNVD-----ISS----------------------VVIEAMM- 87 (207)
Q Consensus 44 ~~~~~~~vLdiG~G~G~~~~~l~~~-------~~-~~v~~~D-----~s~----------------------~~i~~~~- 87 (207)
...++ .|+|+|+-.|.-+..++.. +. .+++++| +.+ +.+....
T Consensus 67 ~~vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~ 145 (257)
T 3tos_A 67 LDVPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLD 145 (257)
T ss_dssp TTSCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHH
T ss_pred hCCCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHH
Confidence 34455 9999999999877776542 22 5899998 321 1122111
Q ss_pred --HH---ccC-CCCceEEEeccccccc-----cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 88 --KK---YSN-RPQLKYIKMDVRQMDE-----FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 88 --~~---~~~-~~~~~~~~~d~~~~~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
++ +.. ..++.++.+++.+..+ .+..++|+|+...-. . ......++.+...|+|||++++-
T Consensus 146 ~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y-------~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 146 AHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--Y-------EPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp HHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--H-------HHHHHHHHHHGGGEEEEEEEEES
T ss_pred HHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--c-------chHHHHHHHHHHHhCCCcEEEEc
Confidence 11 222 2679999999988532 244579999976432 1 56677899999999999999997
Q ss_pred EeC
Q 028547 157 TYG 159 (207)
Q Consensus 157 ~~~ 159 (207)
.+.
T Consensus 217 D~~ 219 (257)
T 3tos_A 217 ELD 219 (257)
T ss_dssp STT
T ss_pred CCC
Confidence 764
No 315
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.58 E-value=0.0037 Score=49.19 Aligned_cols=75 Identities=16% Similarity=0.274 Sum_probs=60.3
Q ss_pred cEEEEcCCCchhhHHHHhcCC--CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc--cCCCCeeEEEeCcchhh
Q 028547 50 RILIVGCGNSAFSEGMVDDGY--EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE--FQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~fD~v~~~~~l~~ 125 (207)
+++|+-||.|.+..-+.+.|. ..+.++|+++.+.+..+.+++. ..++..|+.+..+ ++...+|+++...+...
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~ 81 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---TNLLNRNIQQLTPQVIKKWNVDTILMSPPCQP 81 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---SCEECCCGGGCCHHHHHHTTCCEEEECCCCCC
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---CceeccccccCCHHHhccCCCCEEEecCCCcc
Confidence 899999999999999888875 5788999999999999998853 4577888888632 23336899999888776
Q ss_pred hc
Q 028547 126 LL 127 (207)
Q Consensus 126 ~~ 127 (207)
++
T Consensus 82 fS 83 (333)
T 4h0n_A 82 FT 83 (333)
T ss_dssp SE
T ss_pred hh
Confidence 64
No 316
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.48 E-value=0.0032 Score=48.72 Aligned_cols=64 Identities=20% Similarity=0.247 Sum_probs=43.7
Q ss_pred CCceEEEeccccc-cccCCCCeeEEEeCcchhhhccCCCC-------------hhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 94 PQLKYIKMDVRQM-DEFQTGSFDSVVDKGTLDSLLCGSNS-------------RQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 94 ~~~~~~~~d~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~-------------~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..++++++|+.+. ..+++++||+|+++.++......... ......+++++.++|+|||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3568999999984 23467899999999887532100000 0123567889999999999998864
No 317
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.39 E-value=0.0091 Score=46.73 Aligned_cols=69 Identities=6% Similarity=0.040 Sum_probs=51.3
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccc
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQM 106 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~ 106 (207)
+..++.....+.. .|||.-||+|..+....+.|- +++|+|+++...+.+++++... .....++.|+.+.
T Consensus 242 ~~~~i~~~~~~~~-~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~i 311 (323)
T 1boo_A 242 PEFFIRMLTEPDD-LVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRI 311 (323)
T ss_dssp HHHHHHHHCCTTC-EEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCC-EEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3344544444444 999999999999999888876 9999999999999999998753 2344444555544
No 318
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.30 E-value=0.0034 Score=54.22 Aligned_cols=102 Identities=11% Similarity=0.058 Sum_probs=65.9
Q ss_pred CcEEEEcCCCchhhHHHHhcC-----------C--CcEEEEeC---CHHHHHHHHHHcc-----------C---------
Q 028547 49 QRILIVGCGNSAFSEGMVDDG-----------Y--EDVVNVDI---SSVVIEAMMKKYS-----------N--------- 92 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~-----------~--~~v~~~D~---s~~~i~~~~~~~~-----------~--------- 92 (207)
-+|+|+|.|+|.....+.+.. . -+++++|. +.+.+..+...++ .
T Consensus 60 ~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 139 (689)
T 3pvc_A 60 CIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCH 139 (689)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEE
T ss_pred eEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCce
Confidence 399999999998776554421 1 26899998 5555544322111 0
Q ss_pred -------CCCceEEEeccccccccC----CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEE
Q 028547 93 -------RPQLKYIKMDVRQMDEFQ----TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYI 154 (207)
Q Consensus 93 -------~~~~~~~~~d~~~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~ 154 (207)
...+++..+|+.+..+.- ...+|.++.. .+....+++-....++..+.++++|||.+.
T Consensus 140 r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD----~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 140 RILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLD----GFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEEC----SSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred EEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEEC----CCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 014567778887753321 4689999954 443444555567889999999999999865
No 319
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.30 E-value=0.025 Score=44.91 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=62.2
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cccc-ccccCCCCeeEEEeC
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DVRQ-MDEFQTGSFDSVVDK 120 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~~~-~~~~~~~~fD~v~~~ 120 (207)
.+.+||-+|+|. |.++..+++. |...|+++|.+++.++.+++.-.. .++.. ++.+ ......+.+|+|+..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~~~~~~~gg~D~vid~ 265 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT----HVINSKTQDPVAAIKEITDGGVNFALES 265 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS----EEEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC----EEecCCccCHHHHHHHhcCCCCcEEEEC
Confidence 345999999876 7888888774 554799999999988888764211 22221 1111 111122379999864
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.. ....++.+.+.|+++|.+++...
T Consensus 266 ~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 266 TG-------------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp SC-------------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CC-------------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 21 13457888999999999887653
No 320
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.28 E-value=0.0044 Score=53.41 Aligned_cols=101 Identities=10% Similarity=0.088 Sum_probs=65.1
Q ss_pred cEEEEcCCCchhhHHHHhc------------CC-CcEEEEeC---CHHHHHHHHHH--------------ccC-------
Q 028547 50 RILIVGCGNSAFSEGMVDD------------GY-EDVVNVDI---SSVVIEAMMKK--------------YSN------- 92 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~------------~~-~~v~~~D~---s~~~i~~~~~~--------------~~~------- 92 (207)
+|+|+|.|+|.......+. .. -+++++|. +.+.+..+... .+.
T Consensus 69 ~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 148 (676)
T 3ps9_A 69 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHR 148 (676)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEEE
T ss_pred EEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCceE
Confidence 9999999999776554332 11 15899998 77776643331 111
Q ss_pred ------CCCceEEEeccccccccC----CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEE
Q 028547 93 ------RPQLKYIKMDVRQMDEFQ----TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYI 154 (207)
Q Consensus 93 ------~~~~~~~~~d~~~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~ 154 (207)
...+.+..+|+.+..+.- ...||+++..+ +....+++-....++..++++++|||.+.
T Consensus 149 ~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~----f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 149 LLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG----FAPAKNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp EEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC----SCGGGCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred EEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC----CCCcCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 012345566776642211 46799999543 33333455567889999999999999876
No 321
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.06 E-value=0.013 Score=45.80 Aligned_cols=55 Identities=9% Similarity=0.166 Sum_probs=43.6
Q ss_pred HHHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCH---HHHHHHHHHccC
Q 028547 36 LAPLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISS---VVIEAMMKKYSN 92 (207)
Q Consensus 36 ~~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~---~~i~~~~~~~~~ 92 (207)
+..++.....+.. .|||.-||+|..+....+.+- +++|+|+++ ..++.+++++..
T Consensus 232 ~~~~i~~~~~~~~-~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 232 IERLVRALSHPGS-TVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHHSCTTC-EEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCCCCC-EEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHH
Confidence 3345555544444 999999999999999988876 999999999 999999998764
No 322
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.98 E-value=0.045 Score=43.20 Aligned_cols=96 Identities=13% Similarity=0.199 Sum_probs=61.7
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec------cc-cccccCCCCeeE
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD------VR-QMDEFQTGSFDS 116 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d------~~-~~~~~~~~~fD~ 116 (207)
+.+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++.-.. .++..+ .. .........+|+
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD----LVLQISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS----EEEECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC----EEEcCcccccchHHHHHHHHhCCCCCE
Confidence 3345999999875 7888888775 444899999999888888753211 222211 11 111111257999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+..-. ....++...+.|+++|.++....
T Consensus 246 vid~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 246 TIECTG-------------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EEECSC-------------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred EEECCC-------------ChHHHHHHHHHhcCCCEEEEEec
Confidence 996421 13356778899999999987653
No 323
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.58 E-value=0.017 Score=46.69 Aligned_cols=45 Identities=9% Similarity=0.231 Sum_probs=37.5
Q ss_pred CCcEEEEcCCCchhhHHHH-hcC--CCcEEEEeCCHHHHHHHHHHccC
Q 028547 48 HQRILIVGCGNSAFSEGMV-DDG--YEDVVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 48 ~~~vLdiG~G~G~~~~~l~-~~~--~~~v~~~D~s~~~i~~~~~~~~~ 92 (207)
+..|+|+|++.|..+..++ +.+ ..+|+++|+++...+..+++...
T Consensus 227 ~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 227 SEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp SCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 3499999999999999887 433 25999999999999998887653
No 324
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.54 E-value=0.056 Score=43.00 Aligned_cols=96 Identities=15% Similarity=0.245 Sum_probs=61.8
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec-----ccc-ccccCCCCeeEE
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD-----VRQ-MDEFQTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d-----~~~-~~~~~~~~fD~v 117 (207)
+.+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++.-.. .++... +.+ ......+.+|+|
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~~~i~~~~~gg~D~v 267 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN----EFVNPKDHDKPIQEVIVDLTDGGVDYS 267 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC----EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc----EEEccccCchhHHHHHHHhcCCCCCEE
Confidence 3345999999875 7777777775 555899999999888887653111 222111 111 111223479999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCC-cEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDK-GVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 158 (207)
+.... ....++.+.+.|+++ |.+++...
T Consensus 268 id~~g-------------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 268 FECIG-------------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EECSC-------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred EECCC-------------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 96411 134678889999996 99887654
No 325
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.53 E-value=0.019 Score=44.96 Aligned_cols=64 Identities=14% Similarity=0.072 Sum_probs=45.3
Q ss_pred CCceEEEeccccc-cccCCCCeeEEEeCcchhhhccCCCC-------hhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 94 PQLKYIKMDVRQM-DEFQTGSFDSVVDKGTLDSLLCGSNS-------RQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 94 ~~~~~~~~d~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~-------~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
....++++|..+. ..++.++||+|++..++........+ .......++.+.++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 3578899998874 23567899999999887532100000 1256788899999999999998865
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.48 E-value=0.13 Score=40.52 Aligned_cols=97 Identities=13% Similarity=0.100 Sum_probs=63.8
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe------cccc-ccc-cCCCCee
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM------DVRQ-MDE-FQTGSFD 115 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~------d~~~-~~~-~~~~~fD 115 (207)
+.+.+||-+|+|. |.++..+++. |...|+++|.+++.++.+++. .. .+..... ++.+ ... .....+|
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~--~~~~~~~~~~~~~~~~~~v~~~t~g~g~D 254 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP--EVVTHKVERLSAEESAKKIVESFGGIEPA 254 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT--TCEEEECCSCCHHHHHHHHHHHTSSCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch--hcccccccccchHHHHHHHHHHhCCCCCC
Confidence 4445899999875 7788888775 454599999999999999876 32 2222221 1111 100 1245799
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+|+..-. -...++.+.+.|+++|.++....
T Consensus 255 vvid~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 255 VALECTG-------------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EEEECSC-------------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred EEEECCC-------------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 9996411 13457788899999999987654
No 327
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.42 E-value=0.12 Score=41.37 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=33.2
Q ss_pred cEEEEcCCCchhhHHHHhc--------CCCcEEEEeCCHHHHHHHHHHccC
Q 028547 50 RILIVGCGNSAFSEGMVDD--------GYEDVVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~--------~~~~v~~~D~s~~~i~~~~~~~~~ 92 (207)
.|+|+|.|.|.++..++.. ...+|+.||+|+...+.-++++..
T Consensus 83 ~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 83 RLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred EEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 7999999999998877642 113899999999887766666644
No 328
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.32 E-value=0.074 Score=41.77 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=61.4
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
+.+.+||-+|+|. |.++..+++. |. +|++++.+++.++.+++. .. -.++ .+.... . ..+|+|+..-.-
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga---~~v~-~~~~~~---~-~~~D~vid~~g~ 244 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM-GV---KHFY-TDPKQC---K-EELDFIISTIPT 244 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT-TC---SEEE-SSGGGC---C-SCEEEEEECCCS
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc-CC---Ceec-CCHHHH---h-cCCCEEEECCCc
Confidence 3445999999875 7777777775 45 999999999888888763 21 1222 332222 2 279999964211
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGA 160 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 160 (207)
...++...+.|+++|.++......
T Consensus 245 -------------~~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 245 -------------HYDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp -------------CCCHHHHHTTEEEEEEEEECCCCC
T ss_pred -------------HHHHHHHHHHHhcCCEEEEECCCC
Confidence 113667789999999998875433
No 329
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.21 E-value=0.043 Score=43.50 Aligned_cols=91 Identities=15% Similarity=0.202 Sum_probs=60.6
Q ss_pred CcEEEEc-CCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe--cccc-ccccCCCCeeEEEeCcc
Q 028547 49 QRILIVG-CGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM--DVRQ-MDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 49 ~~vLdiG-~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~--d~~~-~~~~~~~~fD~v~~~~~ 122 (207)
.+||-.| +|. |.++..+++. +..+|++++.+++.++.+++.-.. .++.. ++.+ ......+.+|+|+...
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad----~vi~~~~~~~~~v~~~~~~g~Dvvid~~- 247 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAH----HVIDHSKPLAAEVAALGLGAPAFVFSTT- 247 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCS----EEECTTSCHHHHHHTTCSCCEEEEEECS-
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCC----EEEeCCCCHHHHHHHhcCCCceEEEECC-
Confidence 4899998 554 8888899885 445999999999888888763211 11111 1111 1112345799998641
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
.-...++.+.+.|+++|.++..
T Consensus 248 ------------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 248 ------------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ------------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred ------------CchhhHHHHHHHhcCCCEEEEE
Confidence 2234678889999999999876
No 330
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.18 E-value=0.16 Score=40.29 Aligned_cols=96 Identities=15% Similarity=0.180 Sum_probs=62.6
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEE---eccccc-cc---cCCCCeeE
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIK---MDVRQM-DE---FQTGSFDS 116 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~---~d~~~~-~~---~~~~~fD~ 116 (207)
+.+.+||-.|+|. |.++..+++. |...|+++|.+++..+.+++.-.. .++. .|+.+. .. ...+.+|+
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT----ATVDPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS----EEECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC----EEECCCCcCHHHHHHhhhhccCCCCCE
Confidence 3445999999875 7777777775 445899999999988888764211 1221 111111 11 22347999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+.... ....++.+.+.|+++|.+++...
T Consensus 257 vid~~G-------------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 257 VIECAG-------------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEECSC-------------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEECCC-------------CHHHHHHHHHHhccCCEEEEEec
Confidence 996411 13467788999999999987653
No 331
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.13 E-value=0.22 Score=39.12 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=63.1
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cccc-ccc-cCCCCeeEEE
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DVRQ-MDE-FQTGSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~~~-~~~-~~~~~fD~v~ 118 (207)
+++.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++.-.. .++.. |+.+ ... .....+|+|+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~v~~~t~g~g~D~v~ 240 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT----DIINYKNGDIVEQILKATDGKGVDKVV 240 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC----EEECGGGSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc----eEEcCCCcCHHHHHHHHcCCCCCCEEE
Confidence 3445999999876 7888888876 444899999999888888775221 22221 1111 001 1234799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
....- ...++.+.+.|+++|.++.....
T Consensus 241 d~~g~-------------~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 241 IAGGD-------------VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp ECSSC-------------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred ECCCC-------------hHHHHHHHHHHhcCCEEEEeccc
Confidence 64111 23577788999999999876543
No 332
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.08 E-value=0.02 Score=44.85 Aligned_cols=94 Identities=14% Similarity=0.198 Sum_probs=61.7
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc----cccCCCCeeEEEe
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM----DEFQTGSFDSVVD 119 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~fD~v~~ 119 (207)
+.+.+||-.|+|. |.++..+++. |. +|+++|.+++.++.+++.-.. .++...-.+. .. ..+.+|+|+.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~~i~~~~~~~~~~~~~-~~g~~d~vid 238 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARDTDPAAWLQK-EIGGAHGVLV 238 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCS----EEEETTTSCHHHHHHH-HHSSEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCC----EEEeCCCcCHHHHHHH-hCCCCCEEEE
Confidence 3445899999975 8888888875 45 999999999988888764211 2222111111 00 1236898885
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
... ....++.+.+.|+++|.++....
T Consensus 239 ~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 239 TAV-------------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SSC-------------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred eCC-------------CHHHHHHHHHHhccCCEEEEeCC
Confidence 421 13467788899999999987653
No 333
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.99 E-value=0.11 Score=41.73 Aligned_cols=107 Identities=15% Similarity=0.213 Sum_probs=62.3
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cc-cc-cccc-CCCCeeEE
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DV-RQ-MDEF-QTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~-~~-~~~~-~~~~fD~v 117 (207)
+.+.+||.+|+|. |.++..+++. |..+|+++|.+++.++.+++. . ..++.. |. .+ .... ....+|+|
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-G----a~~i~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-G----FETIDLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-T----CEEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-C----CcEEcCCCcchHHHHHHHHhCCCCCCEE
Confidence 3345999999976 8888888775 545899999999988887643 1 222221 11 11 1001 22369999
Q ss_pred EeCcchhhhccCC-CChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 118 VDKGTLDSLLCGS-NSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 118 ~~~~~l~~~~~~~-~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+..-.-.....+. .........++.+.+.|+++|.+++..
T Consensus 259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 8642211000000 000012346788899999999987654
No 334
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.86 E-value=0.12 Score=41.09 Aligned_cols=92 Identities=21% Similarity=0.244 Sum_probs=58.3
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccc-ccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ-MDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~fD~v~~~~~l 123 (207)
.+.+||-+|+|. |.++..+++. |. +|++++.+++.++.+++. .. ..++...-.+ ..... ..+|+|+....-
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l-Ga---~~vi~~~~~~~~~~~~-~g~Dvvid~~g~ 267 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL-GA---DEVVNSRNADEMAAHL-KSFDFILNTVAA 267 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH-TC---SEEEETTCHHHHHTTT-TCEEEEEECCSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC---cEEeccccHHHHHHhh-cCCCEEEECCCC
Confidence 345999999975 7777777775 45 799999999888888763 21 1222211011 11111 579999864211
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
...++...+.|+++|.++...
T Consensus 268 -------------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 268 -------------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp -------------CCCHHHHHTTEEEEEEEEECC
T ss_pred -------------HHHHHHHHHHhccCCEEEEec
Confidence 113566789999999988754
No 335
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.74 E-value=0.14 Score=40.62 Aligned_cols=95 Identities=11% Similarity=0.117 Sum_probs=60.6
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec-----ccc-ccccCCCCeeEEE
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD-----VRQ-MDEFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d-----~~~-~~~~~~~~fD~v~ 118 (207)
.+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++. .. -.++..+ +.+ ......+.+|+|+
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga---~~vi~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GA---TECLNPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TC---SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CC---cEEEecccccchHHHHHHHHhCCCCCEEE
Confidence 335999999875 7777777775 444799999999888888753 21 1222111 111 1111224799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCC-cEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDK-GVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 158 (207)
..-. ....++.+.+.|+++ |.++....
T Consensus 267 d~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 267 ECAG-------------RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ECSC-------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCC-------------CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 6411 134577889999999 99887653
No 336
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.46 E-value=0.2 Score=39.34 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=60.2
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecc-cc----ccc-cC---CCCe
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDV-RQ----MDE-FQ---TGSF 114 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~-~~----~~~-~~---~~~f 114 (207)
+.+.+||-.|+|. |.++..+++. |. +|+++|.+++.++.+++.-.. .++..+- .+ ... .. ...+
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~~~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGAD----VTLVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCS----EEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCC----EEEcCcccccHHHHHHHHhccccCCCC
Confidence 3345999999875 7777777774 55 699999999988888753211 2222110 11 100 11 2569
Q ss_pred eEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 115 DSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 115 D~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+|+.... ....++...+.|+++|.++....
T Consensus 242 D~vid~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 242 NVTIDCSG-------------NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SEEEECSC-------------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCC-------------CHHHHHHHHHHHhcCCEEEEEec
Confidence 99996421 12356778899999999887653
No 337
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.30 E-value=0.22 Score=44.74 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=58.0
Q ss_pred cEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc--------------ccC-CCC
Q 028547 50 RILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD--------------EFQ-TGS 113 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~--------------~~~-~~~ 113 (207)
+++|+-||.|.++.-+.+.|+ ..+.++|+++.+.+..+.+++ +..++..|+.++. .++ .+.
T Consensus 542 ~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~ 618 (1002)
T 3swr_A 542 RTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---GSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGD 618 (1002)
T ss_dssp EEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---TSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTT
T ss_pred eEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---CCccccccHHHHhhhccchhhhhhhhhhcccCCC
Confidence 899999999999999988887 578899999999999888874 4456666654320 112 347
Q ss_pred eeEEEeCcchhhhc
Q 028547 114 FDSVVDKGTLDSLL 127 (207)
Q Consensus 114 fD~v~~~~~l~~~~ 127 (207)
+|+|+...+...++
T Consensus 619 vDll~GGpPCQ~FS 632 (1002)
T 3swr_A 619 VEMLCGGPPCQGFS 632 (1002)
T ss_dssp CSEEEECCCCTTCC
T ss_pred eeEEEEcCCCcchh
Confidence 89999998887764
No 338
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.20 E-value=0.74 Score=30.81 Aligned_cols=92 Identities=10% Similarity=0.096 Sum_probs=58.0
Q ss_pred cEEEEcCCC-ch-hhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc---cCCCCeeEEEeCcchh
Q 028547 50 RILIVGCGN-SA-FSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE---FQTGSFDSVVDKGTLD 124 (207)
Q Consensus 50 ~vLdiG~G~-G~-~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~v~~~~~l~ 124 (207)
+|+-+|||. |. ++..+.+.|. +|+++|.+++.++.+++. .+.++.+|..+... .....+|+|++.-.-
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~-----g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~- 81 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER-----GVRAVLGNAANEEIMQLAHLECAKWLILTIPN- 81 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-----TCEEEESCTTSHHHHHHTTGGGCSEEEECCSC-
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc-----CCCEEECCCCCHHHHHhcCcccCCEEEEECCC-
Confidence 899999975 43 3334445566 999999999988887652 56788888876421 123578988854211
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
......+-...+.+.|+..++...
T Consensus 82 ---------~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 82 ---------GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp ---------HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred ---------hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 122222334566677777655443
No 339
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.17 E-value=0.29 Score=38.77 Aligned_cols=95 Identities=13% Similarity=0.186 Sum_probs=60.1
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec-----ccc-ccccCCCCeeEEE
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD-----VRQ-MDEFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d-----~~~-~~~~~~~~fD~v~ 118 (207)
.+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++. .. -.++..+ +.+ ......+.+|+|+
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga---~~vi~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GA---TECVNPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC---SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC---ceEecccccchhHHHHHHHHhCCCCcEEE
Confidence 335999999875 7777777775 444799999999888888653 21 1222111 111 1111224799998
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCC-cEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDK-GVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 158 (207)
..-. ....++...+.|+++ |.++....
T Consensus 267 d~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 267 EVIG-------------RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp ECSC-------------CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred ECCC-------------CHHHHHHHHHHhhcCCcEEEEecc
Confidence 6421 134577888999999 99887653
No 340
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.14 E-value=0.25 Score=39.14 Aligned_cols=95 Identities=14% Similarity=0.227 Sum_probs=60.2
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec-----ccc-ccccCCCCeeEEE
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD-----VRQ-MDEFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d-----~~~-~~~~~~~~fD~v~ 118 (207)
.+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++. .. -.++... +.+ ......+.+|+|+
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga---~~vi~~~~~~~~~~~~~~~~~~~g~D~vi 267 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GA---TDFVNPNDHSEPISQVLSKMTNGGVDFSL 267 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC---CEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CC---ceEEeccccchhHHHHHHHHhCCCCCEEE
Confidence 335999999865 7777777775 444799999999888888753 21 1122111 111 1011124799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCC-cEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDK-GVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 158 (207)
..-. ....++.+.+.|+++ |.++....
T Consensus 268 d~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 268 ECVG-------------NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp ECSC-------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCC-------------CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 6421 134577889999999 99887653
No 341
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=94.04 E-value=0.0086 Score=45.50 Aligned_cols=67 Identities=10% Similarity=0.131 Sum_probs=42.1
Q ss_pred CceEE-EeccccccccCCCCeeEEEeCcchhhhccC-C---CChhhHHHHHHHHHHhcCCCcEEEEEEeCCccc
Q 028547 95 QLKYI-KMDVRQMDEFQTGSFDSVVDKGTLDSLLCG-S---NSRQNATQMLKEVWRVLKDKGVYILVTYGAPIY 163 (207)
Q Consensus 95 ~~~~~-~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~-~---~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~ 163 (207)
...++ .+|+.... ..+.+|+|+++.....-..+ . +......-+++.+.++|+|||.|++..+.....
T Consensus 189 GAt~~~~lDfg~p~--~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr 260 (320)
T 2hwk_A 189 EATFRARLDLGIPG--DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADR 260 (320)
T ss_dssp TCSEECCGGGCSCT--TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSH
T ss_pred CceeecccccCCcc--ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcc
Confidence 44555 67777753 33679999997544321000 0 001223346677789999999999999988743
No 342
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.92 E-value=0.28 Score=38.89 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=60.3
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec-----ccc-ccccCCCCeeEEE
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD-----VRQ-MDEFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d-----~~~-~~~~~~~~fD~v~ 118 (207)
.+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++. .. -.++..+ +.+ ......+.+|+|+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga---~~vi~~~~~~~~~~~~v~~~~~~g~Dvvi 270 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL-GA---TDCLNPRELDKPVQDVITELTAGGVDYSL 270 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC---SEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC---cEEEccccccchHHHHHHHHhCCCccEEE
Confidence 335999999875 7777777775 444799999999888888653 21 1122111 111 1011124799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCC-cEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDK-GVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 158 (207)
..-. ....++.+.+.|+++ |.+++...
T Consensus 271 d~~G-------------~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 271 DCAG-------------TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp ESSC-------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCC-------------CHHHHHHHHHHhhcCCCEEEEECC
Confidence 6411 134577889999999 99887654
No 343
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.91 E-value=0.22 Score=39.44 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=60.5
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec-----ccc-ccccCCCCeeEEE
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD-----VRQ-MDEFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d-----~~~-~~~~~~~~fD~v~ 118 (207)
.+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++.-.. .++... +.+ ......+.+|+|+
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~v~~~~~~g~D~vi 265 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT----ECINPQDFSKPIQEVLIEMTDGGVDYSF 265 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS----EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc----eEeccccccccHHHHHHHHhCCCCCEEE
Confidence 335899999865 7777777764 444799999999888888754211 222111 111 1111224799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCC-cEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDK-GVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 158 (207)
.... ....++.+.+.|+++ |.++....
T Consensus 266 d~~g-------------~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 266 ECIG-------------NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ECSC-------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCC-------------cHHHHHHHHHhhccCCcEEEEEec
Confidence 6421 134577889999999 99887653
No 344
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=93.84 E-value=0.22 Score=43.63 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=40.6
Q ss_pred CcEEEEcCCCchhhHHHHhcC------CCcEEEEeCCHHHHHHHHHHccCCCCceEEEecc
Q 028547 49 QRILIVGCGNSAFSEGMVDDG------YEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDV 103 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~------~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~ 103 (207)
.+|||+-||.|.++.-+.+.| +..+.++|+++.+++..+.|++. ..+.+.|+
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~---~~~~~~di 270 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ---TEVRNEKA 270 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT---SEEEESCH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC---CceecCcH
Confidence 489999999999988877655 45678999999999999988743 34444444
No 345
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.83 E-value=0.31 Score=38.76 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=60.4
Q ss_pred CCCcEEEEcCCC-chhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEec------ccc-cccc-CCCCeeE
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD------VRQ-MDEF-QTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d------~~~-~~~~-~~~~fD~ 116 (207)
.+.+||-.|+|. |.++..+++... .+|++++.+++.++.+++. .. -.++..+ +.+ .... ....+|+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga---~~vi~~~~~~~~~~~~~v~~~~~g~g~Dv 270 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA---DLTLNRRETSVEERRKAIMDITHGRGADF 270 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC---SEEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC---cEEEeccccCcchHHHHHHHHhCCCCCcE
Confidence 335999999764 777777777533 4999999999988888753 21 1222211 111 1111 2336999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+....- ...++...+.|+++|.++....
T Consensus 271 vid~~g~-------------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 271 ILEATGD-------------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp EEECSSC-------------TTHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC-------------HHHHHHHHHHHhcCCEEEEEec
Confidence 9964211 1246778899999999887653
No 346
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.83 E-value=0.38 Score=37.96 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=60.5
Q ss_pred CCCcEEEEcCCC-chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc----cc-cCCCCeeEEEeC
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM----DE-FQTGSFDSVVDK 120 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~----~~-~~~~~fD~v~~~ 120 (207)
.+.+||-+|+|. |..+..+++....+|++++.+++.++.+++.-.. .++..+-.+. .. .....+|+|+..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD----HGINRLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS----EEEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC----EEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 345999999875 7777777775323999999999888888764211 2222111111 00 123479999864
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.. ...++.+.+.|+++|.++....
T Consensus 265 ~g--------------~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 265 AG--------------GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TT--------------SSCHHHHHHHEEEEEEEEEECC
T ss_pred CC--------------hHHHHHHHHHhhcCCEEEEEec
Confidence 21 1236677899999999988764
No 347
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.80 E-value=0.47 Score=37.87 Aligned_cols=106 Identities=11% Similarity=0.183 Sum_probs=62.8
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec----ccc-ccc-cCCCCeeEEE
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD----VRQ-MDE-FQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d----~~~-~~~-~~~~~fD~v~ 118 (207)
.+.+||-+|+|. |.++..+++. |...|+++|.+++.++.+++. . ...+... +.+ ... .....+|+|+
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-G----a~~i~~~~~~~~~~~v~~~t~g~g~Dvvi 259 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-G----FEIADLSLDTPLHEQIAALLGEPEVDCAV 259 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-T----CEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-C----CcEEccCCcchHHHHHHHHhCCCCCCEEE
Confidence 345999999876 8888888875 444799999999988888653 1 1222211 111 101 1234799999
Q ss_pred eCcchhhhccC--CCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 119 DKGTLDSLLCG--SNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 119 ~~~~l~~~~~~--~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..-.-...... -.........++...+.|+++|.+++..
T Consensus 260 d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 260 DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp ECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred ECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 64221100000 0000122346788899999999987754
No 348
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.79 E-value=0.17 Score=39.58 Aligned_cols=94 Identities=12% Similarity=0.192 Sum_probs=60.3
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc---CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecc-cc-cccc-CCCCeeEEEe
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD---GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDV-RQ-MDEF-QTGSFDSVVD 119 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~---~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~-~~-~~~~-~~~~fD~v~~ 119 (207)
.+.+||-+|+|. |.++..+++. |. +|++++.+++.++.+++.-.. .++..+- .+ .... ....+|+|+.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~~~g~g~D~vid 244 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGAD----YVSEMKDAESLINKLTDGLGASIAID 244 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCS----EEECHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCC----EEeccccchHHHHHhhcCCCccEEEE
Confidence 344999999965 7777777764 55 899999999988888764211 2221110 01 0011 2337999996
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.-. ....++.+.+.|+++|.++....
T Consensus 245 ~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 245 LVG-------------TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp SSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC-------------ChHHHHHHHHHhhcCCEEEEeCC
Confidence 421 13357788899999999887553
No 349
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.57 E-value=0.86 Score=35.44 Aligned_cols=96 Identities=15% Similarity=0.176 Sum_probs=60.1
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec---cccc-cc-cCCCCeeEEE
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD---VRQM-DE-FQTGSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d---~~~~-~~-~~~~~fD~v~ 118 (207)
+.+.+||-.|+|. |.++..+++. |...++++|.+++-++.+++.-. ..++... ..+. .. .....+|+|+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa----~~~i~~~~~~~~~~~~~~~~~~g~d~v~ 234 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA----MQTFNSSEMSAPQMQSVLRELRFNQLIL 234 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC----SEEEETTTSCHHHHHHHHGGGCSSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC----eEEEeCCCCCHHHHHHhhcccCCccccc
Confidence 3445999999875 5666666664 55577899999998888876421 1222211 1111 00 1235678888
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
... .....++...+.|+++|.+++...
T Consensus 235 d~~-------------G~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 235 ETA-------------GVPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp ECS-------------CSHHHHHHHHHHCCTTCEEEECCC
T ss_pred ccc-------------cccchhhhhhheecCCeEEEEEec
Confidence 531 124457778899999999987653
No 350
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.38 E-value=0.28 Score=38.34 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=62.8
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec--ccc-cccc-CCCCeeEEEe
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD--VRQ-MDEF-QTGSFDSVVD 119 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d--~~~-~~~~-~~~~fD~v~~ 119 (207)
+++.+||-+|+|. |.++..+++. +..+|+++|.+++.++.+++.-.. .++..+ ..+ .... ....+|+|+.
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~----~~i~~~~~~~~~v~~~t~g~g~d~v~d 245 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD----AAVKSGAGAADAIRELTGGQGATAVFD 245 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS----EEEECSTTHHHHHHHHHGGGCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC----EEEcCCCcHHHHHHHHhCCCCCeEEEE
Confidence 3344999999875 7888888775 345999999999998888764211 222211 111 1001 2347999996
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.- .....++.+.+.|+++|.++....
T Consensus 246 ~~-------------G~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 246 FV-------------GAQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp SS-------------CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred CC-------------CCHHHHHHHHHHHhcCCEEEEECC
Confidence 41 113467888999999999987654
No 351
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.32 E-value=0.47 Score=37.00 Aligned_cols=92 Identities=17% Similarity=0.250 Sum_probs=59.3
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------cccCCCCeeEE
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------DEFQTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~fD~v 117 (207)
+.+.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++. .. ..+ .|..+. .... +.+|+|
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga---~~~--~d~~~~~~~~~~~~~~-~~~d~v 234 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKEL-GA---DLV--VNPLKEDAAKFMKEKV-GGVHAA 234 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-TC---SEE--ECTTTSCHHHHHHHHH-SSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHC-CC---CEE--ecCCCccHHHHHHHHh-CCCCEE
Confidence 3345999999864 7777777664 55 999999999888888652 21 111 122211 0011 479999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+.... ....++...+.|+++|.++....
T Consensus 235 id~~g-------------~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 235 VVTAV-------------SKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EESSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-------------CHHHHHHHHHHhhcCCEEEEecc
Confidence 86421 12457788899999999887643
No 352
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.16 E-value=0.12 Score=40.34 Aligned_cols=94 Identities=13% Similarity=0.132 Sum_probs=59.6
Q ss_pred CCCCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc----cccCCCCeeEEE
Q 028547 46 SHHQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM----DEFQTGSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~fD~v~ 118 (207)
+.+++||-.|+ |.|..+..+++. |. +|++++.+++.++.+.+.+.. ..++...-.+. .....+.+|+|+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~vi 223 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGF---DGAIDYKNEDLAAGLKRECPKGIDVFF 223 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCC---SEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC---CEEEECCCHHHHHHHHHhcCCCceEEE
Confidence 34459999998 346777777664 55 999999999888888444321 11221111111 011235799998
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.... ...++.+.+.|+++|.++...
T Consensus 224 ~~~g--------------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 224 DNVG--------------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp ESSC--------------HHHHHHHHTTEEEEEEEEECC
T ss_pred ECCC--------------cchHHHHHHHHhhCCEEEEEe
Confidence 6421 136788889999999988765
No 353
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.08 E-value=0.14 Score=40.10 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=58.7
Q ss_pred CCCcEEEEc-CCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe--cccc-ccccCCCCeeEEEeC
Q 028547 47 HHQRILIVG-CGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM--DVRQ-MDEFQTGSFDSVVDK 120 (207)
Q Consensus 47 ~~~~vLdiG-~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~--d~~~-~~~~~~~~fD~v~~~ 120 (207)
.+.+||-.| +|. |..+..+++. |. +|++++.+++.++.+++.-.. .++.. ++.+ ........+|+|+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD----IVLNHKESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCS----EEECTTSCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCc----EEEECCccHHHHHHHhCCCCccEEEEC
Confidence 344899884 543 7777777765 55 999999999988888774211 11111 1111 111234579999964
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
. .....++.+.+.|+++|.++..
T Consensus 225 ~-------------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 225 F-------------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp S-------------CHHHHHHHHHHHEEEEEEEEES
T ss_pred C-------------CchHHHHHHHHHhccCCEEEEE
Confidence 1 2244677888999999998754
No 354
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.04 E-value=0.083 Score=39.82 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=42.0
Q ss_pred CceEEEeccccc-cccCCCCeeEEEeCcchhhhccCCC---Ch----hhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 95 QLKYIKMDVRQM-DEFQTGSFDSVVDKGTLDSLLCGSN---SR----QNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 95 ~~~~~~~d~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~---~~----~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..+++++|..+. ...+.++||+|++..++..-..... +. ......++.+.++|+|+|.+++..
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 346788888764 2245678999999987652100000 01 245677888899999999998864
No 355
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.94 E-value=0.12 Score=40.31 Aligned_cols=62 Identities=16% Similarity=0.133 Sum_probs=42.4
Q ss_pred ceEE-Eeccccc-cccCCCCeeEEEeCcchhhhcc----CCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 96 LKYI-KMDVRQM-DEFQTGSFDSVVDKGTLDSLLC----GSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 96 ~~~~-~~d~~~~-~~~~~~~fD~v~~~~~l~~~~~----~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..++ ++|..+. ..++.++||+|+...++..-.. ...-.......+..+.++|+|+|.+++..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 5677 8998774 2245679999999987752100 00001256778888899999999998865
No 356
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.72 E-value=0.68 Score=35.89 Aligned_cols=91 Identities=14% Similarity=0.208 Sum_probs=57.6
Q ss_pred CCCCcEEEEcC--CCchhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccc---c----cccCCCCee
Q 028547 46 SHHQRILIVGC--GNSAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ---M----DEFQTGSFD 115 (207)
Q Consensus 46 ~~~~~vLdiG~--G~G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~---~----~~~~~~~fD 115 (207)
+.+++||-.|+ |.|..+..++. .|. +|+++|.+++.++.+++ +.. . .. .|..+ . .....+.+|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~-~g~--~-~~--~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ-IGF--D-AA--FNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH-TTC--S-EE--EETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh-cCC--c-EE--EecCCHHHHHHHHHHHhCCCCe
Confidence 33459999998 34666666655 456 99999999988888743 321 1 11 23322 1 011125799
Q ss_pred EEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 116 SVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 116 ~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+++.+.. ...++...+.|+++|.+++..
T Consensus 217 ~vi~~~g--------------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 217 CYFDNVG--------------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEESSC--------------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCC--------------hHHHHHHHHHHhcCCEEEEEe
Confidence 9986521 124678889999999988765
No 357
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.64 E-value=1.2 Score=35.69 Aligned_cols=99 Identities=12% Similarity=0.135 Sum_probs=58.0
Q ss_pred CCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cccc-ccc-cCCCCeeEEEeC
Q 028547 48 HQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DVRQ-MDE-FQTGSFDSVVDK 120 (207)
Q Consensus 48 ~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~~~-~~~-~~~~~fD~v~~~ 120 (207)
+.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++.-.. .++.. |+.+ ... .....+|+|+..
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD----HVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS----EEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC----EEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 34899999865 7777777775 445899999999988888765211 12211 1111 101 123479999964
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
-.-. .......++.+.+.++++|.+++...
T Consensus 290 ~g~~--------~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 290 TGVP--------QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp SSCH--------HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCc--------HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 2111 01222333333345599999988653
No 358
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.62 E-value=1.4 Score=34.00 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=58.1
Q ss_pred CcEEEEcCCC--chhhHHHHhcCCC-cEEEEeCCHHHHHHHHHHccCCCCceEEEecccc-ccccCCCCeeEEEeCcchh
Q 028547 49 QRILIVGCGN--SAFSEGMVDDGYE-DVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ-MDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 49 ~~vLdiG~G~--G~~~~~l~~~~~~-~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~fD~v~~~~~l~ 124 (207)
.+|.-||+|. +.++..+.+.|+. +|+++|.+++.++.+.+.- -+.-...+..+ . -...|+|+..-..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G----~~~~~~~~~~~~~----~~~aDvVilavp~- 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----IIDEGTTSIAKVE----DFSPDFVMLSSPV- 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----SCSEEESCTTGGG----GGCCSEEEECSCG-
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC----CcchhcCCHHHHh----hccCCEEEEeCCH-
Confidence 4899999885 4556666666653 8999999998887776531 11112233333 2 1357988865332
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
......++++...++++.+++-+
T Consensus 105 ---------~~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 105 ---------RTFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp ---------GGHHHHHHHHHHHSCTTCEEEEC
T ss_pred ---------HHHHHHHHHHhhccCCCcEEEEC
Confidence 34567788899999998766543
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.58 E-value=0.29 Score=38.49 Aligned_cols=89 Identities=19% Similarity=0.322 Sum_probs=57.7
Q ss_pred CcEEEEcCCC-chhh-HHHH-hc-CCCcEEEEeCCHH---HHHHHHHHccCCCCceEEEecccc-----ccccCCCCeeE
Q 028547 49 QRILIVGCGN-SAFS-EGMV-DD-GYEDVVNVDISSV---VIEAMMKKYSNRPQLKYIKMDVRQ-----MDEFQTGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~-G~~~-~~l~-~~-~~~~v~~~D~s~~---~i~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~fD~ 116 (207)
.+||-+|+|. |.++ ..++ +. |..+|++++.+++ .++.+++. . .... |..+ .... .+.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l-G----a~~v--~~~~~~~~~i~~~-~gg~Dv 245 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL-D----ATYV--DSRQTPVEDVPDV-YEQMDF 245 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT-T----CEEE--ETTTSCGGGHHHH-SCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc-C----Cccc--CCCccCHHHHHHh-CCCCCE
Confidence 4999999864 7777 7777 54 4534999999887 77777653 1 1222 2221 1111 237999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+..-. ....++.+.+.|+++|.++....
T Consensus 246 vid~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 246 IYEATG-------------FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEECSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCC-------------ChHHHHHHHHHHhcCCEEEEEeC
Confidence 985411 12357788899999999887653
No 360
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.54 E-value=0.53 Score=36.82 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=60.1
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cccc-cccc-CCCCeeEEEe
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DVRQ-MDEF-QTGSFDSVVD 119 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~~~-~~~~-~~~~fD~v~~ 119 (207)
.+.+||-+|+|. |..+..+++. |..+|++++.+++.++.+++.-.. .++.. ++.+ .... ....+|+|+.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~----~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGAD----YVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCS----EEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC----EEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 335999999964 7777777765 444899999999888888754211 12211 1111 1001 2346999996
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
... ....++.+.+.|+++|.++....
T Consensus 243 ~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 243 FSG-------------APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp CSC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC-------------CHHHHHHHHHHHhcCCEEEEEcc
Confidence 421 13457788899999999887653
No 361
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.47 E-value=0.19 Score=39.57 Aligned_cols=95 Identities=18% Similarity=0.194 Sum_probs=58.1
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccc-cc-cccCCCCeeEEEeCcc
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVR-QM-DEFQTGSFDSVVDKGT 122 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~-~~-~~~~~~~fD~v~~~~~ 122 (207)
.+.+||-+|+|. |.++..+++. |. +|++++.+++.++.+++. .. -.++..+-. +. .... +.+|+|+....
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l-Ga---~~v~~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM-GA---DHYIATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH-TC---SEEEEGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc-CC---CEEEcCcCchHHHHHhh-cCCCEEEECCC
Confidence 335999999864 7777777764 55 799999988888888763 21 122222111 11 0111 57999996422
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
-. ....++.+.+.|+++|.++....
T Consensus 253 ~~-----------~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 253 SL-----------TDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CS-----------TTCCTTTGGGGEEEEEEEEECCC
T ss_pred CC-----------cHHHHHHHHHHhcCCCEEEEecC
Confidence 10 01124556789999999887553
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.41 E-value=0.14 Score=40.01 Aligned_cols=91 Identities=11% Similarity=0.136 Sum_probs=58.9
Q ss_pred CCCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccc---c----cccCCCCeeE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ---M----DEFQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~---~----~~~~~~~fD~ 116 (207)
.+++||-.|+ |.|..+..+++. |. +|++++.+++.++.+++.+.. ..++ |..+ . .....+.+|+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~---~~~~--d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGF---DDAF--NYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCC---SEEE--ETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC---ceEE--ecCCHHHHHHHHHHHhCCCCcE
Confidence 3459999997 347777777664 55 899999999888888744421 1122 2221 1 0011256999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|+.... ...++...+.|+++|.+++..
T Consensus 229 vi~~~g--------------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 229 YFENVG--------------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEESSC--------------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEECCC--------------HHHHHHHHHHHhcCCEEEEEc
Confidence 986521 135788899999999988754
No 363
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.34 E-value=0.42 Score=37.24 Aligned_cols=94 Identities=13% Similarity=0.191 Sum_probs=57.8
Q ss_pred CCCCcEEEEcCCC--chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc----cc-cCCCCeeEE
Q 028547 46 SHHQRILIVGCGN--SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM----DE-FQTGSFDSV 117 (207)
Q Consensus 46 ~~~~~vLdiG~G~--G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~----~~-~~~~~fD~v 117 (207)
+.+.+||-.|+|+ |..+..+++. |. +|++++.+++.++.+++.-.. .++...-.+. .. .....+|+|
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~----~~~~~~~~~~~~~~~~~~~~~g~Dvv 217 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAA----YVIDTSTAPLYETVMELTNGIGADAA 217 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCS----EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCc----EEEeCCcccHHHHHHHHhCCCCCcEE
Confidence 3445999999874 6777777664 56 999999998888888764211 2222111111 00 123479999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+....- .. .....+.|+++|.++....
T Consensus 218 id~~g~-------------~~-~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 218 IDSIGG-------------PD-GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EESSCH-------------HH-HHHHHHTEEEEEEEEECCC
T ss_pred EECCCC-------------hh-HHHHHHHhcCCCEEEEEee
Confidence 964221 11 2334589999999987654
No 364
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.29 E-value=0.36 Score=37.76 Aligned_cols=94 Identities=19% Similarity=0.402 Sum_probs=58.4
Q ss_pred CCCcEEEEcCCC--chhhHHHHhc--CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccc----ccccCC-CCeeEE
Q 028547 47 HHQRILIVGCGN--SAFSEGMVDD--GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ----MDEFQT-GSFDSV 117 (207)
Q Consensus 47 ~~~~vLdiG~G~--G~~~~~l~~~--~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~----~~~~~~-~~fD~v 117 (207)
.+++||-.|+|+ |..+..+++. |. +|+++|.+++.++.+++. .. . .++...-.+ ...... +.+|+|
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~-g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA-GA--D-YVINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH-TC--S-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh-CC--C-EEecCCCccHHHHHHHHhcCCCceEE
Confidence 345999999984 5556565554 66 899999999888888653 21 1 122111011 111122 479999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+.... ....++.+.+.|+++|.++....
T Consensus 245 i~~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 245 IDLNN-------------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EESCC-------------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred EECCC-------------CHHHHHHHHHHHhcCCEEEEECC
Confidence 96521 13357778899999999887553
No 365
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.25 E-value=1.3 Score=33.26 Aligned_cols=108 Identities=18% Similarity=0.212 Sum_probs=65.2
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCC------------HHHHHHHHHHcc-CCCCceEEEecccccccc--
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDIS------------SVVIEAMMKKYS-NRPQLKYIKMDVRQMDEF-- 109 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s------------~~~i~~~~~~~~-~~~~~~~~~~d~~~~~~~-- 109 (207)
+++||--|++.| .++..+++.|+ +|+.+|.+ .+.++.+..... ...++.++.+|+.+....
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 347888887766 45566677777 89999876 555555544333 225788899998875211
Q ss_pred -------CCCCeeEEEeCcchhhhccCCCChhhH-----------HHHHHHHHHhcCCCcEEEEEE
Q 028547 110 -------QTGSFDSVVDKGTLDSLLCGSNSRQNA-----------TQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 110 -------~~~~fD~v~~~~~l~~~~~~~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.-+..|+++.+..+..... ..+.+++ -.+++.+.+.++.+|.++.+.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGA-HLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCT-TCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccC-cCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 1136899988755432211 1122222 234455566777788877655
No 366
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.17 E-value=0.52 Score=36.36 Aligned_cols=91 Identities=10% Similarity=0.152 Sum_probs=59.2
Q ss_pred cEEEEcC-C-CchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe-ccccccccCCCCeeEEEeCcchhhh
Q 028547 50 RILIVGC-G-NSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM-DVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 50 ~vLdiG~-G-~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+||-.|+ | .|.++..+++....+|++++.+++..+.+++.-.. .++.. +.........+.+|+|+.. .
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~~~~~d~v~d~-----~ 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGAN----RILSRDEFAESRPLEKQLWAGAIDT-----V 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCS----EEEEGGGSSCCCSSCCCCEEEEEES-----S
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC----EEEecCCHHHHHhhcCCCccEEEEC-----C
Confidence 5999997 3 47888888775333999999999888888764211 12211 1111111234579998853 1
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+ ...++.+.+.|+++|.++....
T Consensus 220 -----g----~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 -----G----DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp -----C----HHHHHHHHHTEEEEEEEEECCC
T ss_pred -----C----cHHHHHHHHHHhcCCEEEEEec
Confidence 1 1268888999999999987653
No 367
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.17 E-value=0.65 Score=32.95 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=55.8
Q ss_pred CCCcEEEEcC--CCchhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------cc-cCCCCeeE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------DE-FQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~~-~~~~~fD~ 116 (207)
.+++||..|+ |.|..+..++. .|. +|+++|.+++..+.+++. .. . .. .|..+. .. .....+|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~-g~--~-~~--~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL-GV--E-YV--GDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT-CC--S-EE--EETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc-CC--C-EE--eeCCcHHHHHHHHHHhCCCCCeE
Confidence 3459999995 34665555554 466 899999998877766542 11 1 11 232221 00 12346999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
++.+.. ...++.+.+.|+++|.++...
T Consensus 111 vi~~~g--------------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 111 VLNSLA--------------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEECCC--------------THHHHHHHHTEEEEEEEEECS
T ss_pred EEECCc--------------hHHHHHHHHHhccCCEEEEEc
Confidence 996421 135678889999999988755
No 368
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.11 E-value=2.1 Score=29.81 Aligned_cols=93 Identities=16% Similarity=0.172 Sum_probs=55.8
Q ss_pred CcEEEEcCCC-chh-hHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc---ccc-CCCCeeEEEeCc
Q 028547 49 QRILIVGCGN-SAF-SEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM---DEF-QTGSFDSVVDKG 121 (207)
Q Consensus 49 ~~vLdiG~G~-G~~-~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~---~~~-~~~~fD~v~~~~ 121 (207)
.+|+-+|+|. |.. +..+.+. |. +|+++|.+++.++.+++. .+.++.+|..+. ... ....+|+|+..-
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE-----GRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT-----TCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC-----CCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 3899999875 433 3344455 66 899999999887776542 355667776553 111 245689888631
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.- ......+-...+.+.|++.++...
T Consensus 114 ~~----------~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 114 PH----------HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SS----------HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CC----------hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 11 122222333556667777766654
No 369
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.05 E-value=0.43 Score=37.23 Aligned_cols=97 Identities=15% Similarity=0.102 Sum_probs=59.1
Q ss_pred CCCCCcEEEEcCCC-chhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEE---ecccc-ccc-cCCCCeeEE
Q 028547 45 PSHHQRILIVGCGN-SAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIK---MDVRQ-MDE-FQTGSFDSV 117 (207)
Q Consensus 45 ~~~~~~vLdiG~G~-G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~---~d~~~-~~~-~~~~~fD~v 117 (207)
.+++.+||-+|+|. |.++..+++ .+..+|+++|.+++-++.+++.-.. .++. .|..+ ... .....+|.+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~----~~i~~~~~~~~~~v~~~t~g~g~d~~ 236 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITGGLGVQSA 236 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS----EEEEC-CCCHHHHHHHHTTSSCEEEE
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe----EEEeCCCCCHHHHhhhhcCCCCceEE
Confidence 34445999999986 344444544 4445999999999888877764322 2221 12211 111 123457777
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
+... .-...+....+.|+++|.+++...
T Consensus 237 ~~~~-------------~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 237 IVCA-------------VARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EECC-------------SCHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEec-------------cCcchhheeheeecCCceEEEEec
Confidence 7431 114457788899999999887653
No 370
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.05 E-value=0.78 Score=34.12 Aligned_cols=107 Identities=13% Similarity=0.308 Sum_probs=66.4
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCee
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
++++|--|++.| .++..+++.|+ +|+.++.+++.++...+... .++.++.+|+.+.... ..+..|
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 347888887766 45566677787 99999999988777766553 3678888998875211 124789
Q ss_pred EEEeCcchhhhc-cCCCChhhHH-----------HHHHHHHHhcCCCcEEEEEE
Q 028547 116 SVVDKGTLDSLL-CGSNSRQNAT-----------QMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 116 ~v~~~~~l~~~~-~~~~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~ 157 (207)
+++.+....... ....+.+++. .+.+.+.+.++++|.++.+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 988765432210 0011222222 23445556667778877655
No 371
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.90 E-value=0.78 Score=30.55 Aligned_cols=65 Identities=15% Similarity=0.226 Sum_probs=45.0
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc---cCCCCeeEEEeC
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE---FQTGSFDSVVDK 120 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~v~~~ 120 (207)
+|+-+|+|. | .++..+.+.|. +|+++|.+++.++.+++. ...++.+|..+... .....+|.|+..
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 799999865 3 23344455567 999999999888777653 46778888877421 124578988864
No 372
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.78 E-value=1.6 Score=32.41 Aligned_cols=108 Identities=12% Similarity=0.183 Sum_probs=63.9
Q ss_pred CcEEEEcCC--Cc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEecccccccc---------CCC
Q 028547 49 QRILIVGCG--NS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEF---------QTG 112 (207)
Q Consensus 49 ~~vLdiG~G--~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~---------~~~ 112 (207)
+++|-.|++ .| .++..+++.|+ +|+.++.++...+.+++..... .++.++.+|+.+.... ..+
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 478888876 44 45667777787 8999987765444444333221 3688999999885211 113
Q ss_pred CeeEEEeCcchhhh-----ccCCCChhhHH-----------HHHHHHHHhcCCCcEEEEEE
Q 028547 113 SFDSVVDKGTLDSL-----LCGSNSRQNAT-----------QMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 113 ~fD~v~~~~~l~~~-----~~~~~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~ 157 (207)
..|+++.+..+... .....+.+... .+++.+.+.++++|.++.+.
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 68988876543220 00111222222 34556667778888887766
No 373
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=91.64 E-value=1.5 Score=40.74 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=57.7
Q ss_pred CcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc--------------ccC-CC
Q 028547 49 QRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD--------------EFQ-TG 112 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~--------------~~~-~~ 112 (207)
.+++|+-||.|.++.-+.+.|+ ..+.++|+++.+.+..+.+++ ...++..|+.++. .++ .+
T Consensus 852 l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~~ 928 (1330)
T 3av4_A 852 LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---GTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKG 928 (1330)
T ss_dssp EEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---TSEEECSCHHHHHHHHTTTCSBCSSCCBCCCTT
T ss_pred ceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---CCcEeeccHHHHhHhhhccchhhhhhhhccccC
Confidence 3899999999999999988886 568899999999999888874 3455555554220 111 24
Q ss_pred CeeEEEeCcchhhhc
Q 028547 113 SFDSVVDKGTLDSLL 127 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~ 127 (207)
.+|+|+...+.+.++
T Consensus 929 ~vDvl~GGpPCQ~FS 943 (1330)
T 3av4_A 929 DVEMLCGGPPCQGFS 943 (1330)
T ss_dssp TCSEEEECCCCTTTC
T ss_pred ccceEEecCCCcccc
Confidence 689999998888774
No 374
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.60 E-value=0.26 Score=38.02 Aligned_cols=87 Identities=22% Similarity=0.311 Sum_probs=56.1
Q ss_pred CCCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 46 SHHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 46 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
+.+.+||-.|+|. |.++..+++. |. +|++++ +++.++.+++.-.. .++ .| .... ...+|+|+..-
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~----~v~-~d---~~~v-~~g~Dvv~d~~-- 207 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVR----HLY-RE---PSQV-TQKYFAIFDAV-- 207 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEE----EEE-SS---GGGC-CSCEEEEECC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCC----EEE-cC---HHHh-CCCccEEEECC--
Confidence 3345999999964 7777777775 55 999999 88888888764211 222 23 2122 56899998531
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. ...+....+.|+++|.++...
T Consensus 208 g------------~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 208 N------------SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ------------------TTGGGEEEEEEEEEEC
T ss_pred C------------chhHHHHHHHhcCCCEEEEEe
Confidence 1 012355689999999988764
No 375
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.58 E-value=1.9 Score=32.70 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=65.0
Q ss_pred CCcEEEEcCCCc-----hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCC
Q 028547 48 HQRILIVGCGNS-----AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 48 ~~~vLdiG~G~G-----~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
++++|-.|++.| .++..+++.|+ +|+.++.++...+.+++......++.++.+|+.+.... .-+.
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK 109 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 347888887633 45566777787 89999988754444433322224678888998875211 1247
Q ss_pred eeEEEeCcchhhh-----ccCCCChhh-----------HHHHHHHHHHhcCCCcEEEEEEe
Q 028547 114 FDSVVDKGTLDSL-----LCGSNSRQN-----------ATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 114 fD~v~~~~~l~~~-----~~~~~~~~~-----------~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.|+++.+..+... .....+.++ ...+++.+.+.++++|.++.+..
T Consensus 110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 8999876543310 001112222 23345566677778888877653
No 376
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.49 E-value=0.36 Score=37.95 Aligned_cols=93 Identities=24% Similarity=0.303 Sum_probs=56.8
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe-ccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM-DVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~fD~v~~~~~l 123 (207)
.+.+||-+|+|. |.++..+++. |. +|++++.+++.++.+++.+... .++.. +....... .+.+|+|+..-.-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~-~~g~D~vid~~g~ 254 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGAD---DYVIGSDQAKMSEL-ADSLDYVIDTVPV 254 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCS---CEEETTCHHHHHHS-TTTEEEEEECCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCc---eeeccccHHHHHHh-cCCCCEEEECCCC
Confidence 445899999864 6777777664 55 8999999988777776444321 12211 11111111 2469999864211
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. ..++...+.|+++|.++...
T Consensus 255 ~-------------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 255 H-------------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp C-------------CCSHHHHTTEEEEEEEEECS
T ss_pred h-------------HHHHHHHHHhccCCEEEEeC
Confidence 1 12455678999999988754
No 377
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.48 E-value=2.4 Score=31.90 Aligned_cols=73 Identities=21% Similarity=0.344 Sum_probs=51.1
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCee
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
++++|-.|++.| .++..+++.|+ +|+.+|.+++..+...+.+. .++.++.+|+.+.... .-+..|
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIG--CGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHC--SSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC--CcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 347787787766 45566677787 99999999887777666552 3678889998875211 123689
Q ss_pred EEEeCcch
Q 028547 116 SVVDKGTL 123 (207)
Q Consensus 116 ~v~~~~~l 123 (207)
+++.+..+
T Consensus 106 ~lvnnAg~ 113 (277)
T 3gvc_A 106 KLVANAGV 113 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99877554
No 378
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.43 E-value=0.64 Score=36.71 Aligned_cols=94 Identities=24% Similarity=0.353 Sum_probs=56.8
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe-ccccccccCCCCeeEEEeCcch
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM-DVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~fD~v~~~~~l 123 (207)
.+.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++.+.. -.++.. +....... .+.+|+|+..-..
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~-~~~~D~vid~~g~ 261 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGA---DSFLVSRDQEQMQAA-AGTLDGIIDTVSA 261 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCC---SEEEETTCHHHHHHT-TTCEEEEEECCSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCC---ceEEeccCHHHHHHh-hCCCCEEEECCCc
Confidence 445899999864 6666666664 45 899999998877777654432 122211 11111111 2479999964221
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
. ..++...+.|+++|.++....
T Consensus 262 ~-------------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 262 V-------------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp C-------------CCSHHHHHHEEEEEEEEECCC
T ss_pred H-------------HHHHHHHHHHhcCCEEEEEcc
Confidence 1 124556788999999887653
No 379
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.23 E-value=0.33 Score=38.02 Aligned_cols=92 Identities=16% Similarity=0.274 Sum_probs=58.0
Q ss_pred CCCcEEEEcC--CCchhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccc---c----cccCCCCeeE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ---M----DEFQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~---~----~~~~~~~fD~ 116 (207)
.+++||..|+ |.|..+..+++ .|. +|++++.+++.++.+++. .. . .+ .|..+ . .....+.+|+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~-g~--~-~~--~d~~~~~~~~~~~~~~~~~~~D~ 241 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSI-GG--E-VF--IDFTKEKDIVGAVLKATDGGAHG 241 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHT-TC--C-EE--EETTTCSCHHHHHHHHHTSCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHc-CC--c-eE--EecCccHhHHHHHHHHhCCCCCE
Confidence 3459999998 34666666665 455 999999888777776652 11 1 12 23321 1 0011227999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+.... ....++.+.+.|+++|.++....
T Consensus 242 vi~~~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 242 VINVSV-------------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEECSS-------------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred EEECCC-------------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 986522 12457888899999999887653
No 380
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.88 E-value=1.7 Score=33.83 Aligned_cols=89 Identities=13% Similarity=0.129 Sum_probs=58.2
Q ss_pred CCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------cc-cCCCCeeEE
Q 028547 48 HQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------DE-FQTGSFDSV 117 (207)
Q Consensus 48 ~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~~-~~~~~fD~v 117 (207)
+.+||-.|+ |.|..+..+++. |. +|++++.+++.++.+++. .. . .++ |..+. .. .....+|+|
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~-ga--~-~~~--d~~~~~~~~~~~~~~~~~~~d~v 239 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL-GA--D-ETV--NYTHPDWPKEVRRLTGGKGADKV 239 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH-TC--S-EEE--ETTSTTHHHHHHHHTTTTCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC--C-EEE--cCCcccHHHHHHHHhCCCCceEE
Confidence 359999998 457777777664 55 999999999888888653 21 1 122 22211 00 123479999
Q ss_pred EeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 118 VDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
+.... . ..++.+.+.|+++|.++...
T Consensus 240 i~~~g-~-------------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 240 VDHTG-A-------------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EESSC-S-------------SSHHHHHHHEEEEEEEEESS
T ss_pred EECCC-H-------------HHHHHHHHhhccCCEEEEEe
Confidence 96532 1 23677789999999887754
No 381
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=90.75 E-value=3.5 Score=32.71 Aligned_cols=94 Identities=15% Similarity=0.083 Sum_probs=61.1
Q ss_pred CcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--C--CceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 49 QRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--P--QLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~--~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
.+||.++.+.|.+++.++..+ ++.+.=|-......+.++... . .+.+. +..+. ....+|+|+..-+
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~---~~~~~~~v~~~lp-- 109 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHK---PYSIGDSYISELATRENLRLNGIDESSVKFL--DSTAD---YPQQPGVVLIKVP-- 109 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCCGGGSEEE--ETTSC---CCSSCSEEEEECC--
T ss_pred CCEEEECCCCCHHHHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCCccceEec--ccccc---cccCCCEEEEEcC--
Confidence 389999999999999987653 344432444444444544321 1 23433 22222 3467999886422
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.........+..+...|++|+.+++..-
T Consensus 110 ------k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 110 ------KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp ------SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred ------CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 2336788889999999999999987663
No 382
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.60 E-value=0.42 Score=37.30 Aligned_cols=94 Identities=11% Similarity=0.169 Sum_probs=58.3
Q ss_pred CCCcEEEEcCCC-chhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cccc-ccccCCCCeeEEEeC
Q 028547 47 HHQRILIVGCGN-SAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DVRQ-MDEFQTGSFDSVVDK 120 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~~~-~~~~~~~~fD~v~~~ 120 (207)
.+.+||-+|+|. |..+..+++. |..+|++++.+++.++.+++. .. .++.. ++.+ ........+|+|+..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~----~v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD----RLVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS----EEECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH----hccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 334999999854 7777777775 444899999998777666543 21 11111 1111 000113469999864
Q ss_pred cchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 121 GTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.. ....++...+.|+++|.++....
T Consensus 239 ~g-------------~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 239 SG-------------NEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp SC-------------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CC-------------CHHHHHHHHHHHhcCCEEEEEec
Confidence 21 13457788899999999887653
No 383
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.38 E-value=2.1 Score=33.68 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=59.2
Q ss_pred CCCCcEEEEc--CCCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cccc-ccccCCCCeeEEE
Q 028547 46 SHHQRILIVG--CGNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DVRQ-MDEFQTGSFDSVV 118 (207)
Q Consensus 46 ~~~~~vLdiG--~G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~~~-~~~~~~~~fD~v~ 118 (207)
+.+.+||-.| .|.|..+..+++. |. +|++++.+++.++.+++. .. -.++.. ++.+ ........+|+|+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~-Ga---~~~~~~~~~~~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL-GC---DRPINYKTEPVGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-TC---SEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc-CC---cEEEecCChhHHHHHHHhcCCCCCEEE
Confidence 3345999999 3458888777765 55 899999999888888763 21 122221 1111 1011235799998
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.... ...++.+.+.|+++|.++...
T Consensus 237 d~~g--------------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 237 ESVG--------------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp ECSC--------------THHHHHHHHHEEEEEEEEECC
T ss_pred ECCC--------------HHHHHHHHHHHhcCCEEEEEe
Confidence 6421 135778889999999988755
No 384
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.30 E-value=1.1 Score=34.69 Aligned_cols=93 Identities=13% Similarity=0.140 Sum_probs=58.8
Q ss_pred CCCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc----cc-cCCCCeeEEE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM----DE-FQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~----~~-~~~~~fD~v~ 118 (207)
.+.+||-.|+ |.|..+..+++. |. +|++++.+++.++.+++.- . -.++..+-.+. .. .....+|+|+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g-a---~~~~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYG-A---EYLINASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT-C---SEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC-C---cEEEeCCCchHHHHHHHHhCCCCceEEE
Confidence 3459999994 346777777665 55 9999999998888776632 1 12222111111 00 1235799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
....- ..++.+.+.|+++|.++....
T Consensus 223 d~~g~--------------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 223 DSVGK--------------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp ECCGG--------------GGHHHHHHHEEEEEEEEECCC
T ss_pred ECCCh--------------HHHHHHHHHhccCCEEEEEcC
Confidence 64221 346778899999999987653
No 385
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.92 E-value=1.7 Score=33.50 Aligned_cols=93 Identities=10% Similarity=0.015 Sum_probs=59.3
Q ss_pred CCCcEEEEcC-C-CchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc-----cccCCCCeeEEE
Q 028547 47 HHQRILIVGC-G-NSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM-----DEFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~-G-~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~fD~v~ 118 (207)
++.+||-.|+ | .|..+..+++. |. +|++++.+++.++.+++.-.. .++..+-.+. .......+|+|+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~----~~~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAW----ETIDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCS----EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC----EEEeCCCccHHHHHHHHhCCCCceEEE
Confidence 3459999983 3 47777777664 55 999999999988888764211 2222111111 001235799999
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
....- ..+....+.|+++|.++....
T Consensus 215 d~~g~--------------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 215 DGVGQ--------------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp ESSCG--------------GGHHHHHTTEEEEEEEEECCC
T ss_pred ECCCh--------------HHHHHHHHHhcCCCEEEEEec
Confidence 64221 246677899999999988654
No 386
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.85 E-value=2.9 Score=27.32 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=52.8
Q ss_pred CcEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc---cCCCCeeEEEeCcch
Q 028547 49 QRILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE---FQTGSFDSVVDKGTL 123 (207)
Q Consensus 49 ~~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~v~~~~~l 123 (207)
.+|+-+|+|. | .++..+.+.+. +|+++|.+++.++...+.. .+.++.+|..+... .....+|+|+..-.-
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence 3788888864 3 22334445565 8999999998777665442 34566666654311 123568988865221
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
......+..+.+.+.++ .++.
T Consensus 80 ----------~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 80 ----------EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp ----------HHHHHHHHHHHHHTTCC-CEEE
T ss_pred ----------chHHHHHHHHHHHcCCC-EEEE
Confidence 22234455566667775 4443
No 387
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.45 E-value=2.7 Score=32.25 Aligned_cols=92 Identities=14% Similarity=0.126 Sum_probs=54.6
Q ss_pred CCCCcEEEEc-CCC-chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccc-ccccCCCCeeEEEeCcc
Q 028547 46 SHHQRILIVG-CGN-SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ-MDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 46 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~fD~v~~~~~ 122 (207)
+++.+||-.| +|. |.++..+++....++++++ +++..+.+++.-.. .++..+-.+ .. .....+|+|+..-.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~----~~i~~~~~~~~~-~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAE----QCINYHEEDFLL-AISTPVDAVIDLVG 224 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCS----EEEETTTSCHHH-HCCSCEEEEEESSC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCC----EEEeCCCcchhh-hhccCCCEEEECCC
Confidence 3445999986 554 8888888775333888887 55556666653211 222221111 11 11257999986411
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
-.. +....+.|+++|.++...
T Consensus 225 -------------~~~-~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 -------------GDV-GIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp -------------HHH-HHHHGGGEEEEEEEEECC
T ss_pred -------------cHH-HHHHHHhccCCCEEEEeC
Confidence 122 377889999999988754
No 388
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.37 E-value=1.6 Score=34.00 Aligned_cols=93 Identities=17% Similarity=0.221 Sum_probs=58.4
Q ss_pred CCCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEec--ccc-ccc-cCCCCeeEEEe
Q 028547 47 HHQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMD--VRQ-MDE-FQTGSFDSVVD 119 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d--~~~-~~~-~~~~~fD~v~~ 119 (207)
.+.+||-.|+ |.|..+..+++. |. +|++++.+++.++.+++.-. -.++..+ +.+ ... .....+|+|+.
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga----~~v~~~~~~~~~~v~~~~~~~g~Dvvid 233 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA----DIVLPLEEGWAKAVREATGGAGVDMVVD 233 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC----SEEEESSTTHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC----cEEecCchhHHHHHHHHhCCCCceEEEE
Confidence 3459999997 347777777765 55 99999998888888776421 1222222 111 111 12347999996
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
...- ..+..+.+.|+++|.++....
T Consensus 234 ~~g~--------------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 234 PIGG--------------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp SCC----------------CHHHHHHTEEEEEEEEEC--
T ss_pred CCch--------------hHHHHHHHhhcCCCEEEEEEc
Confidence 4211 146778899999999987653
No 389
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.36 E-value=3.7 Score=33.08 Aligned_cols=92 Identities=20% Similarity=0.235 Sum_probs=60.9
Q ss_pred cEEEEcCCC-chhh-HHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc---ccCCCCeeEEEeCcchh
Q 028547 50 RILIVGCGN-SAFS-EGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD---EFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 50 ~vLdiG~G~-G~~~-~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~fD~v~~~~~l~ 124 (207)
+|+-+|+|. |... ..|.+.|. .|+++|.+++.++.+++. .+.++.+|..+.. ...-...|+|++.- .
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~-----g~~vi~GDat~~~~L~~agi~~A~~viv~~--~ 77 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF-----GMKVFYGDATRMDLLESAGAAKAEVLINAI--D 77 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT-----TCCCEESCTTCHHHHHHTTTTTCSEEEECC--S
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC-----CCeEEEcCCCCHHHHHhcCCCccCEEEECC--C
Confidence 799999864 4333 33344566 999999999999888753 4678889988752 12346789888641 1
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.......+-...+.+.|+..++...
T Consensus 78 --------~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 78 --------DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp --------SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred --------ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 1344445556667778877666654
No 390
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.35 E-value=4.6 Score=29.00 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=55.8
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc---cCCCCeeEEEeCcchh
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE---FQTGSFDSVVDKGTLD 124 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~v~~~~~l~ 124 (207)
+|+-+|+|. | .++..+.+.+. +|+++|.+++.++...+.. ...++.+|..+... ..-...|+|++.-.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~-- 74 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILRDAEVSKNDVVVILTP-- 74 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHHHHTCCTTCEEEECCS--
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHHhcCcccCCEEEEecC--
Confidence 577788753 2 23334444566 9999999998887765543 46788888887421 13457898886421
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
.+.....+..+.+.+.+...++.
T Consensus 75 --------~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 75 --------RDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp --------CHHHHHHHHHHHHHTSCCCEEEE
T ss_pred --------CcHHHHHHHHHHHHHcCCCeEEE
Confidence 13334455555666666555554
No 391
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.31 E-value=1.9 Score=32.82 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=63.1
Q ss_pred CcEEEEcCCC--c---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCe
Q 028547 49 QRILIVGCGN--S---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~--G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
+++|-.|+++ | .++..+++.|+ +|+.++.++...+...+.......+.++.+|+.+.... .-+..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL 109 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4788888754 4 35666777787 89999988754444333222223568889998875211 11468
Q ss_pred eEEEeCcchhhh-----ccCCCChhh-----------HHHHHHHHHHhcCCCcEEEEEEe
Q 028547 115 DSVVDKGTLDSL-----LCGSNSRQN-----------ATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 115 D~v~~~~~l~~~-----~~~~~~~~~-----------~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+++.+..+... .....+.++ ...+++.+.+.++.+|.++.+..
T Consensus 110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 999877543211 001112222 22344555667777888877653
No 392
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=89.28 E-value=5.4 Score=29.64 Aligned_cols=72 Identities=17% Similarity=0.257 Sum_probs=48.9
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD~ 116 (207)
+++|-.|++.| .++..+++.|+ +|+.++.+++.++...+.+. .++.++.+|+.+.... .-+..|+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 37787887665 45556666777 99999999887776655543 3677888898875211 1136799
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+...
T Consensus 84 lvnnAg~ 90 (263)
T 2a4k_A 84 VAHFAGV 90 (263)
T ss_dssp EEEGGGG
T ss_pred EEECCCC
Confidence 9876544
No 393
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.16 E-value=2.1 Score=34.81 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=58.8
Q ss_pred CCCcEEEEcC-C-CchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cc------------------
Q 028547 47 HHQRILIVGC-G-NSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DV------------------ 103 (207)
Q Consensus 47 ~~~~vLdiG~-G-~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~------------------ 103 (207)
.+.+||-+|+ | .|.++..+++....++++++.+++-++.+++.-.. .++.. |.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~----~vi~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE----AIIDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC----EEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc----EEEecCcCcccccccccccchHHHHHHH
Confidence 3348999997 4 47777777775333889999899888888664211 11111 00
Q ss_pred ccccc-cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 104 RQMDE-FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 104 ~~~~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..... .....+|+|+.... ...+....+.|+++|.++...
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G--------------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG--------------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC--------------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHhCCCCCcEEEEcCC--------------chhHHHHHHHhhCCcEEEEEe
Confidence 01100 12357999986411 145778889999999998754
No 394
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.01 E-value=0.51 Score=37.02 Aligned_cols=90 Identities=11% Similarity=0.094 Sum_probs=57.4
Q ss_pred CcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------cccCCCCeeEEEe
Q 028547 49 QRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------DEFQTGSFDSVVD 119 (207)
Q Consensus 49 ~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~fD~v~~ 119 (207)
.+||-.|+ |.|..+..+++. |..+|++++.+++.++.+++.+.. ..+ .|..+. .....+.+|+++.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~---~~~--~d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF---DAA--INYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC---SEE--EETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---ceE--EecCchHHHHHHHHhcCCCCCEEEE
Confidence 59999998 346666666654 444899999998888877664421 112 222211 0111237999986
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
... ...++.+.+.|+++|.++...
T Consensus 237 ~~G--------------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 237 NVG--------------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp SCC--------------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCC--------------HHHHHHHHHHhccCcEEEEEC
Confidence 521 145778889999999988754
No 395
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=89.01 E-value=5.5 Score=29.87 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=50.5
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCee
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
++++|--|++.| .++..+++.|+ +|+.+|.+++.++...+... ..+.++.+|+.+.... .-+..|
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIG--SKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 347888888766 45566677777 99999999887776665543 3678888998875211 113689
Q ss_pred EEEeCcch
Q 028547 116 SVVDKGTL 123 (207)
Q Consensus 116 ~v~~~~~l 123 (207)
+++.+..+
T Consensus 104 ~lv~nAg~ 111 (277)
T 4dqx_A 104 VLVNNAGF 111 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 98877554
No 396
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=89.00 E-value=3.4 Score=32.88 Aligned_cols=105 Identities=18% Similarity=0.112 Sum_probs=64.6
Q ss_pred HHHHHhhCCCCCCcEEEEcCCCchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeE
Q 028547 37 APLIKLYVPSHHQRILIVGCGNSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDS 116 (207)
Q Consensus 37 ~~~l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~ 116 (207)
.+.+.+.......+||.++-+.|.+++.+... . +++.+.-+.......+.+-- ...+ .... ......||+
T Consensus 35 ~~~l~~~~~~~~~~~l~~n~~~g~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~---~~~~----~~~~-~~~~~~~d~ 104 (381)
T 3dmg_A 35 HDLLQKTVEPFGERALDLNPGVGWGSLPLEGR-M-AVERLETSRAAFRCLTASGL---QARL----ALPW-EAAAGAYDL 104 (381)
T ss_dssp HHHHHTTCCCCSSEEEESSCTTSTTTGGGBTT-B-EEEEEECBHHHHHHHHHTTC---CCEE----CCGG-GSCTTCEEE
T ss_pred HHHHHHHHHHhCCcEEEecCCCCccccccCCC-C-ceEEEeCcHHHHHHHHHcCC---Cccc----cCCc-cCCcCCCCE
Confidence 34444444444359999999999988887633 3 67777555554444433311 1111 1112 124578999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|+..-+-+ .........+..+.+.|+|||.+++..
T Consensus 105 v~~~~Pk~------k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 105 VVLALPAG------RGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp EEEECCGG------GCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCcc------hhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 99643211 112456888999999999999999876
No 397
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=88.98 E-value=3 Score=32.58 Aligned_cols=116 Identities=16% Similarity=0.259 Sum_probs=71.6
Q ss_pred HHHHHhhCCC--CCCcEEEEcCCCchhhHHHHhcC--CCcEEEEeCCHHHHHHHHHHcc---------------------
Q 028547 37 APLIKLYVPS--HHQRILIVGCGNSAFSEGMVDDG--YEDVVNVDISSVVIEAMMKKYS--------------------- 91 (207)
Q Consensus 37 ~~~l~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~i~~~~~~~~--------------------- 91 (207)
...+..++.. +...|+.+|||.=.....+...+ ...++=+|. |+.++.-++.+.
T Consensus 78 D~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~ 156 (334)
T 3iei_A 78 SQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMD 156 (334)
T ss_dssp HHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCC
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccc
Confidence 3444444432 23489999999866666665542 125666665 334333222221
Q ss_pred ----CCCCceEEEecccccc---------ccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 92 ----NRPQLKYIKMDVRQMD---------EFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 92 ----~~~~~~~~~~d~~~~~---------~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
...+.+++.+|+.+.. .+....-=++++-+++.++ +++....+++.+.+... +|.+++...
T Consensus 157 ~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL-----~~~~~~~ll~~ia~~f~-~~~~i~yE~ 230 (334)
T 3iei_A 157 GHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM-----TPEQSANLLKWAANSFE-RAMFINYEQ 230 (334)
T ss_dssp TTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS-----CHHHHHHHHHHHHHHCS-SEEEEEEEE
T ss_pred cccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC-----CHHHHHHHHHHHHHhCC-CceEEEEec
Confidence 1246788999987731 1233445588888889988 77899999999998764 566655554
Q ss_pred C
Q 028547 159 G 159 (207)
Q Consensus 159 ~ 159 (207)
.
T Consensus 231 i 231 (334)
T 3iei_A 231 V 231 (334)
T ss_dssp C
T ss_pred c
Confidence 3
No 398
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=88.92 E-value=2.3 Score=31.64 Aligned_cols=73 Identities=21% Similarity=0.307 Sum_probs=47.5
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccC---------CCC
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQ---------TGS 113 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~---------~~~ 113 (207)
++||-.|++.| .++..+++.|+ +|++++.+++..+...+.+.. ..++.++.+|+.+..... .+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 37888887665 44556666777 899999988766655444432 135778888988752110 135
Q ss_pred eeEEEeCcc
Q 028547 114 FDSVVDKGT 122 (207)
Q Consensus 114 fD~v~~~~~ 122 (207)
.|+++.+..
T Consensus 87 id~lv~~Ag 95 (267)
T 2gdz_A 87 LDILVNNAG 95 (267)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 798887654
No 399
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.81 E-value=2.4 Score=31.28 Aligned_cols=73 Identities=15% Similarity=0.246 Sum_probs=46.2
Q ss_pred CcEEEEcCCCc---hhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccC---------CCCe
Q 028547 49 QRILIVGCGNS---AFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQ---------TGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~---------~~~f 114 (207)
++||-.|+..| .++..+++ .|+ +|++++.++...+...+.+.. ..++.++.+|+.+..... .+.+
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 83 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 36776665543 34445566 677 899999887766655444432 246888999988752111 1368
Q ss_pred eEEEeCcc
Q 028547 115 DSVVDKGT 122 (207)
Q Consensus 115 D~v~~~~~ 122 (207)
|+|+.+..
T Consensus 84 d~li~~Ag 91 (276)
T 1wma_A 84 DVLVNNAG 91 (276)
T ss_dssp EEEEECCC
T ss_pred CEEEECCc
Confidence 99887644
No 400
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.71 E-value=2.8 Score=32.72 Aligned_cols=90 Identities=12% Similarity=0.189 Sum_probs=56.7
Q ss_pred CCCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------c-ccCCCCeeE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------D-EFQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~-~~~~~~fD~ 116 (207)
.+.+||-.|+ |.|..+..+++. |. +|++++.+++.++.+++. .. ..++ |..+. . ......+|+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~-ga---~~~~--d~~~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQN-GA---HEVF--NHREVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT-TC---SEEE--ETTSTTHHHHHHHHHCTTCEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHc-CC---CEEE--eCCCchHHHHHHHHcCCCCcEE
Confidence 3459999997 346666666654 55 899999999888876543 11 1122 22211 0 012347999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|+.... ...+....+.|+++|.++...
T Consensus 243 vi~~~G--------------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 243 IIEMLA--------------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEESCH--------------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC--------------hHHHHHHHHhccCCCEEEEEe
Confidence 986521 124677889999999988765
No 401
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.71 E-value=2.5 Score=32.56 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=57.2
Q ss_pred CCCcEEEEcC--CCchhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------cc-cCCCCeeE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------DE-FQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~~-~~~~~fD~ 116 (207)
.+++||-.|+ |.|..+..+++ .|. +|++++.+++.++.+++. .. . .++ |..+. .. .....+|+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~-g~--~-~~~--~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA-GA--W-QVI--NYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH-TC--S-EEE--ETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc-CC--C-EEE--ECCCccHHHHHHHHhCCCCceE
Confidence 3459999994 34666666555 466 999999999888877663 21 1 122 22211 00 12346999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++.... ...++.+.+.|+++|.++....
T Consensus 213 vi~~~g--------------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 213 VYDSVG--------------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEECSC--------------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EEECCc--------------hHHHHHHHHHhcCCCEEEEEec
Confidence 986532 1246778899999999887653
No 402
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.58 E-value=4.5 Score=33.05 Aligned_cols=94 Identities=17% Similarity=0.276 Sum_probs=58.7
Q ss_pred CcEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc-------------C----CCCceEEEecccccccc
Q 028547 49 QRILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS-------------N----RPQLKYIKMDVRQMDEF 109 (207)
Q Consensus 49 ~~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~-------------~----~~~~~~~~~d~~~~~~~ 109 (207)
++|.-||+|. | .++..++..|+ +|+++|.+++.++.+++... . ....++ ..|...
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~---- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE---- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG----
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH----
Confidence 3799999987 3 45566677777 99999999988777654211 0 001122 233311
Q ss_pred CCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 110 QTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 110 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
-...|+|+..-+ . .......+++++...++|+.+++..+
T Consensus 112 -~~~aDlVIeaVp-e-------~~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 112 -LSTVDLVVEAVF-E-------DMNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp -GTTCSEEEECCC-S-------CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -HCCCCEEEEcCC-C-------CHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 235798886421 1 12345778888999999887766533
No 403
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.30 E-value=6.4 Score=29.27 Aligned_cols=63 Identities=8% Similarity=0.092 Sum_probs=44.1
Q ss_pred CcEEEEcCCCchhhHHHH----hcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 49 QRILIVGCGNSAFSEGMV----DDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~----~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
++||-.|+ |.++..++ +.|+ +|++++-++........ .++.++.+|+.++. ...+|.|+....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~---~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-----SGAEPLLWPGEEPS---LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-----TTEEEEESSSSCCC---CTTCCEEEECCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-----CCCeEEEecccccc---cCCCCEEEECCC
Confidence 38999995 65554444 4566 99999988765444332 36889999998864 467899887544
No 404
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=88.26 E-value=3 Score=33.52 Aligned_cols=43 Identities=9% Similarity=-0.076 Sum_probs=36.4
Q ss_pred cEEEEcCCCchhhHHHHhcC--CCc----EEEEeCCHHHHHHHHHHccC
Q 028547 50 RILIVGCGNSAFSEGMVDDG--YED----VVNVDISSVVIEAMMKKYSN 92 (207)
Q Consensus 50 ~vLdiG~G~G~~~~~l~~~~--~~~----v~~~D~s~~~i~~~~~~~~~ 92 (207)
+|+|+-||.|.+..-+.+.| +.. |.++|+++.+++..+.++..
T Consensus 12 rvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 12 KVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred eEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 99999999999998887776 334 78899999999988888764
No 405
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.21 E-value=2.7 Score=31.11 Aligned_cols=109 Identities=15% Similarity=0.145 Sum_probs=62.2
Q ss_pred CCcEEEEcCC--Cc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCC
Q 028547 48 HQRILIVGCG--NS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 48 ~~~vLdiG~G--~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
.++||-.|++ .| .++..+++.|+ +|+.++.+....+.+++.......+.++.+|+.+.... ..+.
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 92 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDS 92 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3488888875 44 34556666777 89999877544333333222224578899999885211 1247
Q ss_pred eeEEEeCcchhhh----c-cCC-CChhhHH-----------HHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSL----L-CGS-NSRQNAT-----------QMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~----~-~~~-~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+++.+..+... . ... .+.++.. .+++.+.+.++++|.++.+.
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 93 LDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp EEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 8999977544321 0 000 1223322 33445556666677777655
No 406
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.20 E-value=6 Score=29.93 Aligned_cols=96 Identities=19% Similarity=0.231 Sum_probs=55.0
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC---CCCceEEEeccccccccCC--CCeeEEEeCcc
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN---RPQLKYIKMDVRQMDEFQT--GSFDSVVDKGT 122 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~---~~~~~~~~~d~~~~~~~~~--~~fD~v~~~~~ 122 (207)
+|.-+|+|. | .++..+++.|+ +|+.+|.+++.++..++.-.. .........++........ ...|+|+..-.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 788899975 3 44455666677 999999999877777654110 0000000011111101111 26898886422
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
.......++.+...++++..++..
T Consensus 84 ----------~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 84 ----------AQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp ----------HHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred ----------cccHHHHHHHHHHhcCCCCEEEEe
Confidence 234577788888888887765543
No 407
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.17 E-value=2.1 Score=33.23 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=59.9
Q ss_pred cEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc--------CC--C----------CceEEEecccccc
Q 028547 50 RILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS--------NR--P----------QLKYIKMDVRQMD 107 (207)
Q Consensus 50 ~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~--------~~--~----------~~~~~~~d~~~~~ 107 (207)
+|--||+|. +.++..++..|+ +|++.|.+++.++.+.++.. .. . ++.+ ..|..+.
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ea- 84 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA- 84 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH-
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHHH-
Confidence 788899986 466677777888 99999999998888765321 00 0 1222 1232221
Q ss_pred ccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 108 EFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 108 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
-...|+|+..-+ .+......+++++...++|+.++.-.+
T Consensus 85 ---v~~aDlVieavp--------e~~~~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 85 ---VEGVVHIQECVP--------ENLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp ---TTTEEEEEECCC--------SCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred ---HhcCCEEEEecc--------CCHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 245798886421 122445678889999999888665433
No 408
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=88.14 E-value=2.7 Score=31.16 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=63.0
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEE-eCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCC
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNV-DISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~-D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
++++|--|++.| .++..+++.|+ +|+.+ +.+.+..+...+.+.. ..++.++.+|+.+.... .-+.
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 347888888776 45566677787 78777 6666655555444432 25788999999875211 1147
Q ss_pred eeEEEeCcchh-hhc-cCCCChhhH-----------HHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLD-SLL-CGSNSRQNA-----------TQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~-~~~-~~~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+++.+.... ... ....+.+++ -.+.+.+.+.++++|.++.+.
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 89988765322 110 111122222 233445556666677777654
No 409
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.12 E-value=4 Score=30.84 Aligned_cols=108 Identities=17% Similarity=0.218 Sum_probs=68.7
Q ss_pred CCCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCe
Q 028547 47 HHQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 47 ~~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
.++.+|--|++.| ..+..+++.|. +|+.+|.+++.++.+.+.+. .+..++.+|+.+.... .-+..
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3447777787776 45566777787 99999999998888776664 3677888998875211 13578
Q ss_pred eEEEeCcchhhhc-cCCCChhhH-----------HHHHHHHHHhcCCCcEEEEEE
Q 028547 115 DSVVDKGTLDSLL-CGSNSRQNA-----------TQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 115 D~v~~~~~l~~~~-~~~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 157 (207)
|+++.+.-..... ...-+.+++ -.+.+.+.+.|+.+|.++.+.
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 9988775443221 112233332 233444566777778766654
No 410
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.07 E-value=3 Score=32.59 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=58.3
Q ss_pred CCCcEEEEcC-C-CchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc----cccCCCCeeEEEe
Q 028547 47 HHQRILIVGC-G-NSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM----DEFQTGSFDSVVD 119 (207)
Q Consensus 47 ~~~~vLdiG~-G-~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~fD~v~~ 119 (207)
.+.+||-.|+ | .|..+..+++. |. +|++++.+++.++.+++.-.. .++..+-.+. .......+|+|+.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~~~~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAK----RGINYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS----EEEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCC----EEEeCCchHHHHHHHHHhCCCceEEEE
Confidence 3458999853 3 47777777665 55 899999999988888764211 2222111111 0011457999996
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
...- ..++...+.|+++|.++....
T Consensus 242 ~~g~--------------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 242 MIGA--------------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SCCG--------------GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCH--------------HHHHHHHHHhccCCEEEEEEe
Confidence 4221 146677899999999887653
No 411
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.95 E-value=2.7 Score=32.67 Aligned_cols=99 Identities=13% Similarity=0.181 Sum_probs=65.7
Q ss_pred CcEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--------C---C---------CceEEEeccccc
Q 028547 49 QRILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--------R---P---------QLKYIKMDVRQM 106 (207)
Q Consensus 49 ~~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--------~---~---------~~~~~~~d~~~~ 106 (207)
.+|--||+|+ | .++..++..|+ +|+.+|++++.++.+.++... . . ++.+ ..|+.+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~~a 84 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchHhH
Confidence 3899999986 3 55666777788 999999999987776554321 0 0 1111 1222221
Q ss_pred cccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 107 DEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 107 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
-...|+|+-. +.+.+ +-...+++++.++++|+.++--.|.+-+
T Consensus 85 ----~~~ad~ViEa-v~E~l-------~iK~~lf~~l~~~~~~~aIlaSNTSsl~ 127 (319)
T 3ado_A 85 ----VEGVVHIQEC-VPENL-------DLKRKIFAQLDSIVDDRVVLSSSSSCLL 127 (319)
T ss_dssp ----TTTEEEEEEC-CCSCH-------HHHHHHHHHHHTTCCSSSEEEECCSSCC
T ss_pred ----hccCcEEeec-cccHH-------HHHHHHHHHHHHHhhhcceeehhhhhcc
Confidence 2356888754 34444 7889999999999999988876664443
No 412
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.88 E-value=3.7 Score=31.00 Aligned_cols=94 Identities=17% Similarity=0.291 Sum_probs=58.6
Q ss_pred cEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-----------C---------CCceEEEecccccc
Q 028547 50 RILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-----------R---------PQLKYIKMDVRQMD 107 (207)
Q Consensus 50 ~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-----------~---------~~~~~~~~d~~~~~ 107 (207)
+|.-||+|. +.++..++..|+ +|+.+|.+++.++.+.+.... . .++.+ ..|..+.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~- 82 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA- 82 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH-
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH-
Confidence 788888876 345556666777 999999999988877664210 0 01121 2232221
Q ss_pred ccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 108 EFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 108 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
-...|+|+..-. . ..+....+++++...++|+.+++-.+
T Consensus 83 ---~~~aDlVi~av~-~-------~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 83 ---VKDADLVIEAVP-E-------SLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp ---TTTCSEEEECCC-S-------CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ---hccCCEEEEecc-C-------cHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 235798886422 1 22466778889999999987765333
No 413
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=87.27 E-value=5.6 Score=30.56 Aligned_cols=95 Identities=9% Similarity=0.095 Sum_probs=56.9
Q ss_pred cEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEE-eccccccccCCCCeeEEEeCcchh
Q 028547 50 RILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIK-MDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 50 ~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~-~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
+|.-+|+|. +.++..+++.|. +|+.+ ..++.++..++.-.. .+...+.. ..+... .-....+|+|+..-.
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~D~vilavk-- 95 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSD-PSAVQGADLVLFCVK-- 95 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESC-GGGGTTCSEEEECCC--
T ss_pred cEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCC-HHHcCCCCEEEEEcc--
Confidence 899999986 355666677776 89999 888877777654110 01111111 011111 011246898886422
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.......++.+...++++..++...
T Consensus 96 --------~~~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 96 --------STDTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp --------GGGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred --------cccHHHHHHHHHHhcCCCCEEEEeC
Confidence 1356788888888998887665544
No 414
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.20 E-value=5.7 Score=30.58 Aligned_cols=91 Identities=16% Similarity=0.102 Sum_probs=57.7
Q ss_pred CCCcEEEEcC--CCchhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------cc-cCCCCeeE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------DE-FQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~~-~~~~~fD~ 116 (207)
.+.+||-.|+ |.|..+..+++ .|. +|++++.+++.++.+++. .. . ..+ |..+. .. .....+|+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~-g~--~-~~~--d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL-GC--H-HTI--NYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH-TC--S-EEE--ETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC--C-EEE--ECCCHHHHHHHHHHhCCCCCeE
Confidence 3458999995 45776666665 455 999999999888877653 21 1 112 22211 00 12346999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++....- ..++.+.+.|+++|.++....
T Consensus 218 vi~~~g~--------------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 218 VYDSIGK--------------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEECSCT--------------TTHHHHHHTEEEEEEEEECCC
T ss_pred EEECCcH--------------HHHHHHHHhhccCCEEEEEec
Confidence 9864211 346778899999999887653
No 415
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=87.00 E-value=2.2 Score=33.52 Aligned_cols=91 Identities=19% Similarity=0.315 Sum_probs=55.5
Q ss_pred CCcEEEEcCCC-chhhHHHHh-cCCCcEEEEeCCH---HHHHHHHHHccCCCCceEEEe-cccc-ccccCCCCeeEEEeC
Q 028547 48 HQRILIVGCGN-SAFSEGMVD-DGYEDVVNVDISS---VVIEAMMKKYSNRPQLKYIKM-DVRQ-MDEFQTGSFDSVVDK 120 (207)
Q Consensus 48 ~~~vLdiG~G~-G~~~~~l~~-~~~~~v~~~D~s~---~~i~~~~~~~~~~~~~~~~~~-d~~~-~~~~~~~~fD~v~~~ 120 (207)
+.+||-.|+|. |..+..+++ .|. +|++++.++ +.++.+++. . ...... ++.+ ... ....+|+|+..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~-g----a~~v~~~~~~~~~~~-~~~~~d~vid~ 253 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET-K----TNYYNSSNGYDKLKD-SVGKFDVIIDA 253 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH-T----CEEEECTTCSHHHHH-HHCCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh-C----CceechHHHHHHHHH-hCCCCCEEEEC
Confidence 45999999843 556666655 466 999999987 777777653 1 122211 1111 100 11569999865
Q ss_pred cchhhhccCCCChhhHHHHH-HHHHHhcCCCcEEEEEEe
Q 028547 121 GTLDSLLCGSNSRQNATQML-KEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 121 ~~l~~~~~~~~~~~~~~~~l-~~~~~~L~pgG~~~~~~~ 158 (207)
... ...+ +.+.+.|+++|.++....
T Consensus 254 ~g~-------------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 254 TGA-------------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCC-------------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred CCC-------------hHHHHHHHHHHHhcCCEEEEEec
Confidence 221 1135 778899999999887653
No 416
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=86.92 E-value=4.1 Score=31.80 Aligned_cols=91 Identities=11% Similarity=0.015 Sum_probs=56.4
Q ss_pred CCCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccc------cc-cCCCCeeE
Q 028547 47 HHQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQM------DE-FQTGSFDS 116 (207)
Q Consensus 47 ~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~------~~-~~~~~fD~ 116 (207)
.+.+||-.|+ |.|..+..+++. |. +|++++.+++.++.+++. .. . ..+ |..+. .. .....+|+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~-g~--~-~~~--~~~~~~~~~~~~~~~~~~~~d~ 234 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL-GA--A-AGF--NYKKEDFSEATLKFTKGAGVNL 234 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH-TC--S-EEE--ETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc-CC--c-EEE--ecCChHHHHHHHHHhcCCCceE
Confidence 3348999984 346666666554 55 899999999888888543 21 1 122 22111 00 12346999
Q ss_pred EEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 117 VVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 117 v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
++....- ..++...+.|+++|.++....
T Consensus 235 vi~~~G~--------------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 235 ILDCIGG--------------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEESSCG--------------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCc--------------hHHHHHHHhccCCCEEEEEec
Confidence 9865221 136667899999999887653
No 417
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.79 E-value=7.4 Score=29.02 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=52.3
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
+|.-||+|. | .++..+.+.++ +|+++|.+++.++.+.+. .. ... ...+..+ . ...|+|+..-.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~--~~~-~~~~~~~---~--~~~D~vi~av~----- 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER-QL--VDE-AGQDLSL---L--QTAKIIFLCTP----- 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-TS--CSE-EESCGGG---G--TTCSEEEECSC-----
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC-CC--Ccc-ccCCHHH---h--CCCCEEEEECC-----
Confidence 577888875 3 44455566676 899999999877776532 10 111 1122221 2 46798886522
Q ss_pred cCCCChhhHHHHHHHHHHhcCCCcEEE
Q 028547 128 CGSNSRQNATQMLKEVWRVLKDKGVYI 154 (207)
Q Consensus 128 ~~~~~~~~~~~~l~~~~~~L~pgG~~~ 154 (207)
.......++++...++++.+++
T Consensus 67 -----~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 -----IQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp -----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred -----HHHHHHHHHHHHhhCCCCCEEE
Confidence 2345677788888888877554
No 418
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=86.56 E-value=1.5 Score=33.40 Aligned_cols=89 Identities=10% Similarity=0.124 Sum_probs=56.3
Q ss_pred CCCCcEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccc---ccccCCCCeeEEEe
Q 028547 46 SHHQRILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQ---MDEFQTGSFDSVVD 119 (207)
Q Consensus 46 ~~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~fD~v~~ 119 (207)
+.+.+||-.|+ |.|..+..+++. |. +|++++.+++.++.+++. .. -.++ |..+ ... .-..+|+|+.
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~-ga---~~~~--~~~~~~~~~~-~~~~~d~vid 195 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLAL-GA---EEAA--TYAEVPERAK-AWGGLDLVLE 195 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHT-TC---SEEE--EGGGHHHHHH-HTTSEEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-CC---CEEE--ECCcchhHHH-HhcCceEEEE
Confidence 33459999997 347777777664 55 999999988877777652 21 1222 2221 100 1157999985
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..- ..++...+.|+++|.++...
T Consensus 196 -~g~--------------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 196 -VRG--------------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp -CSC--------------TTHHHHHTTEEEEEEEEEC-
T ss_pred -CCH--------------HHHHHHHHhhccCCEEEEEe
Confidence 211 14677889999999988754
No 419
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=86.50 E-value=2.5 Score=31.62 Aligned_cols=109 Identities=17% Similarity=0.216 Sum_probs=62.8
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEE-eCCHHHHHHHHHHcc-CCCCceEEEecccccccc---------CCCC
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNV-DISSVVIEAMMKKYS-NRPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~-D~s~~~i~~~~~~~~-~~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
++++|--|++.| .++..+++.|+ +|+.+ .-++...+...+.+. ...++.++.+|+.+.... .-+.
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 347888888776 45566777787 77776 344444444444332 224678888998875211 1247
Q ss_pred eeEEEeCcchhhhc-cCCCChhhH-----------HHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLL-CGSNSRQNA-----------TQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~-~~~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+++.+..+.... ....+.+++ -.+++.+.+.++++|.++.+.
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 89998775433211 011122222 234556667777788877765
No 420
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=86.28 E-value=1.9 Score=32.28 Aligned_cols=76 Identities=16% Similarity=0.293 Sum_probs=52.4
Q ss_pred CCCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCC
Q 028547 47 HHQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 47 ~~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
.++++|--|++.| ..+..+++.|. +|...|.+++.++...+.+.. ..++.++.+|+.+.... .-+.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 3446666676666 45566677787 999999999888777665542 25678888898875211 2457
Q ss_pred eeEEEeCcch
Q 028547 114 FDSVVDKGTL 123 (207)
Q Consensus 114 fD~v~~~~~l 123 (207)
.|+++.+.-+
T Consensus 87 iDiLVNNAG~ 96 (255)
T 4g81_D 87 VDILINNAGI 96 (255)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8999987544
No 421
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=86.24 E-value=2.8 Score=31.03 Aligned_cols=75 Identities=17% Similarity=0.190 Sum_probs=50.8
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCe
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
++++|--|++.| .++..+++.|+ +|+.++.+++..+...+.+.. ..++.++.+|+.+.... .-+..
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 90 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI 90 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 347777777665 44556667777 899999998877766655432 25788899998875211 11368
Q ss_pred eEEEeCcch
Q 028547 115 DSVVDKGTL 123 (207)
Q Consensus 115 D~v~~~~~l 123 (207)
|+++.+...
T Consensus 91 d~lv~nAg~ 99 (256)
T 3gaf_A 91 TVLVNNAGG 99 (256)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999877544
No 422
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.18 E-value=6.2 Score=27.90 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=54.3
Q ss_pred cEEEEcCCC--c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 50 RILIVGCGN--S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 50 ~vLdiG~G~--G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+||-.|+.. | .+...+++.|+ +|++++-++....... .++.++.+|+.+.....-..+|+|+.......
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~- 73 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH------KDINILQKDIFDLTLSDLSDQNVVVDAYGISP- 73 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC------SSSEEEECCGGGCCHHHHTTCSEEEECCCSST-
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc------CCCeEEeccccChhhhhhcCCCEEEECCcCCc-
Confidence 577777532 2 33344555676 9999998876544332 46889999998763212246798887543321
Q ss_pred ccCCCChhhHHHHHHHHHHhcCC--CcEEEEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKD--KGVYILVT 157 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~p--gG~~~~~~ 157 (207)
...........++.+.++. .+.+++.+
T Consensus 74 ----~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 74 ----DEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp ----TTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred ----cccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 1122233344555555544 35555543
No 423
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.16 E-value=5.8 Score=26.60 Aligned_cols=95 Identities=7% Similarity=0.054 Sum_probs=56.0
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCC-HHHHHHHHHHccCCCCceEEEeccccccc---cCCCCeeEEEeCcch
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDIS-SVVIEAMMKKYSNRPQLKYIKMDVRQMDE---FQTGSFDSVVDKGTL 123 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s-~~~i~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~v~~~~~l 123 (207)
+|+-+|+|. | .++..+.+.|. +|+.+|.+ ++..+....... ..+.++.+|..+... ..-...|.|++.-.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~- 80 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGIDRCRAILALSD- 80 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTTTTCSEEEECSS-
T ss_pred cEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc--CCCeEEEcCCCCHHHHHHcChhhCCEEEEecC-
Confidence 788888753 2 22233444566 99999997 454444443332 257888888876421 13457898886421
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.......+....+.+.|...++...
T Consensus 81 ---------~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 81 ---------NDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ---------CHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred ---------ChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 1334455556667777766665543
No 424
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.09 E-value=5.3 Score=29.72 Aligned_cols=109 Identities=22% Similarity=0.251 Sum_probs=63.5
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeC-CHHHHHHHHHHcc-CCCCceEEEecccccccc---------CCCCe
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDI-SSVVIEAMMKKYS-NRPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~-s~~~i~~~~~~~~-~~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
+++|--|++.| .++..+++.|+ +|+.++. +.+..+...+.+. ...++.++.+|+.+.... .-+..
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 97 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHL 97 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47788887765 35556677777 8888765 4444444444333 225788899998885211 11368
Q ss_pred eEEEeCcchhhhc-cCCCChhh-----------HHHHHHHHHHhcCCCcEEEEEEe
Q 028547 115 DSVVDKGTLDSLL-CGSNSRQN-----------ATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 115 D~v~~~~~l~~~~-~~~~~~~~-----------~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
|+++.+....... ....+.++ .-.+.+.+.+.++++|.++.+..
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 9988765432210 00112222 23345566778888888877664
No 425
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.01 E-value=5.1 Score=29.95 Aligned_cols=109 Identities=15% Similarity=0.199 Sum_probs=63.6
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCC-HHHHHHHHHHcc-CCCCceEEEecccccccc---------CCCC
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDIS-SVVIEAMMKKYS-NRPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s-~~~i~~~~~~~~-~~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
++++|--|++.| .++..+++.|+ +|+.++.. .+..+...+.+. ...++.++.+|+.+.... ..+.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 348888888776 45566777787 88887544 344444433332 224678889998875211 1236
Q ss_pred eeEEEeCcchhhhc-cCCCChhh-----------HHHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLL-CGSNSRQN-----------ATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~-~~~~~~~~-----------~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+++.+..+.... ....+.++ .-.+++.+.+.++++|.++.+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 89998765432210 00112222 2334566677788888877765
No 426
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.93 E-value=1 Score=36.54 Aligned_cols=93 Identities=17% Similarity=0.103 Sum_probs=57.8
Q ss_pred CCCcEEEEcC-C-CchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cc------------------
Q 028547 47 HHQRILIVGC-G-NSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DV------------------ 103 (207)
Q Consensus 47 ~~~~vLdiG~-G-~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~------------------ 103 (207)
.+.+||-.|+ | -|..+..+++....++++++.+++.++.+++. .. . .++.. +.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l-Ga--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL-GC--D-LVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TC--C-CEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CC--C-EEEecccccccccccccccccchhhhHH
Confidence 3458999997 3 37777777775334889999999888888653 21 1 12211 11
Q ss_pred -ccccccCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 104 -RQMDEFQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 104 -~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..........+|+|+.... ...++...+.|+++|.++...
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G--------------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTG--------------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSC--------------HHHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHhCCCceEEEECCC--------------chHHHHHHHHHhcCCEEEEEe
Confidence 0110011356999986421 125677889999999998765
No 427
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=85.76 E-value=0.9 Score=35.09 Aligned_cols=89 Identities=16% Similarity=0.243 Sum_probs=54.7
Q ss_pred cEEEEcC--CCchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe-cc-cc-ccccCCCCeeEEEeCcch
Q 028547 50 RILIVGC--GNSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM-DV-RQ-MDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 50 ~vLdiG~--G~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~-d~-~~-~~~~~~~~fD~v~~~~~l 123 (207)
+||-.|+ |.|..+..+++. |. ++++++.+++.++.+++. .. -.++.. +. .+ ........+|+|+..-.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l-Ga---~~~i~~~~~~~~~~~~~~~~~~d~vid~~g- 225 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVL-GA---KEVLAREDVMAERIRPLDKQRWAAAVDPVG- 225 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHT-TC---SEEEECC---------CCSCCEEEEEECST-
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHc-CC---cEEEecCCcHHHHHHHhcCCcccEEEECCc-
Confidence 7999997 347777777765 55 899999988777777653 21 111111 11 01 11122347999886411
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. ..++...+.|+++|.++...
T Consensus 226 ----------~---~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 226 ----------G---RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp ----------T---TTHHHHHHTEEEEEEEEECS
T ss_pred ----------H---HHHHHHHHhhccCCEEEEEe
Confidence 0 13677789999999988754
No 428
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=85.50 E-value=4.5 Score=29.85 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=46.4
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc----C------CCCe
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF----Q------TGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~----~------~~~f 114 (207)
++||-.|++.| .++..+++.|+ +|++++.++..++...+.+.. ..++.++.+|+.+.... . .+..
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 93 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKL 93 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 37777776554 34455566677 899999988766655444322 24678888898774211 0 1568
Q ss_pred eEEEeCcc
Q 028547 115 DSVVDKGT 122 (207)
Q Consensus 115 D~v~~~~~ 122 (207)
|+++.+..
T Consensus 94 d~li~~Ag 101 (266)
T 1xq1_A 94 DILINNLG 101 (266)
T ss_dssp SEEEEECC
T ss_pred cEEEECCC
Confidence 98887644
No 429
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.44 E-value=3.7 Score=31.27 Aligned_cols=89 Identities=16% Similarity=0.222 Sum_probs=53.7
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
+|.-||+|. | .++..+++.|+ +|+++|.+++.++.+.+. .......+..+. -...|+|+..-.-
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~-----g~~~~~~~~~e~----~~~aDvvi~~vp~---- 74 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE-----GACGAAASAREF----AGVVDALVILVVN---- 74 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-----TCSEEESSSTTT----TTTCSEEEECCSS----
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc-----CCccccCCHHHH----HhcCCEEEEECCC----
Confidence 788898875 3 45556666777 999999999887777653 112212333332 1346888864221
Q ss_pred cCCCChhhHHHHH---HHHHHhcCCCcEEEEEE
Q 028547 128 CGSNSRQNATQML---KEVWRVLKDKGVYILVT 157 (207)
Q Consensus 128 ~~~~~~~~~~~~l---~~~~~~L~pgG~~~~~~ 157 (207)
.......+ +.+...+++|.+++-.+
T Consensus 75 -----~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 75 -----AAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp -----HHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred -----HHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 12334444 55667788877665443
No 430
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.39 E-value=7.8 Score=29.22 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=63.0
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHH-HHHHHHHHccC-CCCceEEEecccccccc---------CCCC
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSV-VIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~-~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
+++||-.|++.| .++..+++.|+ +|+.++.+.. ..+...+.... ..++.++.+|+.+.... .-+.
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 347888887766 45566677777 8999887754 33333333222 24788899999875211 1236
Q ss_pred eeEEEeCcchhhhc--cCCCChhh-----------HHHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLL--CGSNSRQN-----------ATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~--~~~~~~~~-----------~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+++.+....... ....+.++ .-.+++.+.+.++++|.++.+.
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 89988764322110 00012222 2334556677778888877654
No 431
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=85.37 E-value=12 Score=30.72 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=59.9
Q ss_pred cEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc-------CCC------------CceEEEeccccccc
Q 028547 50 RILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS-------NRP------------QLKYIKMDVRQMDE 108 (207)
Q Consensus 50 ~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~-------~~~------------~~~~~~~d~~~~~~ 108 (207)
+|--||+|. +.++..+++.|+ +|++.|.+++.++.+.+... ... ++.+ ..|...
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~--- 81 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA--- 81 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG---
T ss_pred EEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH---
Confidence 677888886 456667777787 99999999999888765421 111 1222 223221
Q ss_pred cCCCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 109 FQTGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 109 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
-...|+|+..- .. +......+++++.+.++++.++...+.
T Consensus 82 --~~~aDlVIeAV-pe-------~~~vk~~v~~~l~~~~~~~~IlasntS 121 (483)
T 3mog_A 82 --LAAADLVIEAA-SE-------RLEVKKALFAQLAEVCPPQTLLTTNTS 121 (483)
T ss_dssp --GGGCSEEEECC-CC-------CHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred --hcCCCEEEEcC-CC-------cHHHHHHHHHHHHHhhccCcEEEecCC
Confidence 13569888641 11 224456788999999999887755443
No 432
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.25 E-value=0.63 Score=37.06 Aligned_cols=99 Identities=10% Similarity=0.183 Sum_probs=54.6
Q ss_pred CCcEEEEcCCC-chhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 48 HQRILIVGCGN-SAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 48 ~~~vLdiG~G~-G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
+++|+-+|+|. |......+. .|. +|+++|.+++.++.+++.+.. .+.....+..++.. .-...|+|+..-....
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--~~~~~~~~~~~l~~-~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--RIHTRYSSAYELEG-AVKRADLVIGAVLVPG 243 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--SSEEEECCHHHHHH-HHHHCSEEEECCCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--eeEeccCCHHHHHH-HHcCCCEEEECCCcCC
Confidence 35999999965 444444443 455 999999999888777665432 12221111111110 0125799986321110
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
. .....+.+...+.++|||.++.+.
T Consensus 244 ------~-~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 244 ------A-KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp ------S-CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred ------C-CCcceecHHHHhcCCCCcEEEEEe
Confidence 0 001112455678899999887654
No 433
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.20 E-value=2.4 Score=31.30 Aligned_cols=74 Identities=19% Similarity=0.355 Sum_probs=51.0
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc----CCCCceEEEecccccccc---------CCC
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS----NRPQLKYIKMDVRQMDEF---------QTG 112 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~----~~~~~~~~~~d~~~~~~~---------~~~ 112 (207)
+++|--|++.| .++..+++.|+ +|+.++.+++.++...+.+. ...++.++.+|+.+.... ..+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYG 86 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcC
Confidence 47888888776 45566677787 99999999887766655432 115678899999875211 124
Q ss_pred CeeEEEeCcch
Q 028547 113 SFDSVVDKGTL 123 (207)
Q Consensus 113 ~fD~v~~~~~l 123 (207)
..|+++.+..+
T Consensus 87 ~iD~lvnnAg~ 97 (250)
T 3nyw_A 87 AVDILVNAAAM 97 (250)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 78999877544
No 434
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.98 E-value=0.93 Score=35.89 Aligned_cols=99 Identities=10% Similarity=0.215 Sum_probs=53.3
Q ss_pred CcEEEEcCCC-chhhHHHH-hcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGN-SAFSEGMV-DDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~-G~~~~~l~-~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
++|+-+|+|. |......+ ..|. +|+++|.+++.++.+++.... .+.....+..+... .-..+|+|+.......-
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~--~~~~~~~~~~~l~~-~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGG--RVITLTATEANIKK-SVQHADLLIGAVLVPGA 242 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--SEEEEECCHHHHHH-HHHHCSEEEECCC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCc--eEEEecCCHHHHHH-HHhCCCEEEECCCCCcc
Confidence 4899999853 44333333 3466 999999999887777654422 11111111111110 11357999865332210
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
.....+.+...+.+++||.++.+..
T Consensus 243 -------~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 243 -------KAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp ----------CCSCHHHHTTSCTTCEEEECC-
T ss_pred -------ccchhHHHHHHHhhcCCCEEEEEec
Confidence 0111124667788899998776553
No 435
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=84.91 E-value=4.1 Score=30.42 Aligned_cols=74 Identities=14% Similarity=0.204 Sum_probs=49.3
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccC----------CCCe
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQ----------TGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~----------~~~f 114 (207)
+++|-.|++.| .++..+++.|+ +|+.++.+++.++...+.+.. ..++.++.+|+.+..... .+..
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 100 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKL 100 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCC
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47888887665 44556666777 899999998776655444332 246788889988752110 1678
Q ss_pred eEEEeCcch
Q 028547 115 DSVVDKGTL 123 (207)
Q Consensus 115 D~v~~~~~l 123 (207)
|+++.+...
T Consensus 101 d~lv~nAg~ 109 (273)
T 1ae1_A 101 NILVNNAGV 109 (273)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCCC
Confidence 999887543
No 436
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=84.85 E-value=3.4 Score=30.52 Aligned_cols=72 Identities=22% Similarity=0.355 Sum_probs=47.3
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC---------CCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ---------TGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~---------~~~fD~ 116 (207)
++||-.|++.| .++..+++.|+ +|+.++.+++..+...+.+. .++.++.+|+.+..... .+..|+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 37788887665 44556666777 89999998877666554432 35678888887742110 136899
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+..+
T Consensus 83 lv~nAg~ 89 (254)
T 1hdc_A 83 LVNNAGI 89 (254)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8876543
No 437
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.29 E-value=1.5 Score=35.93 Aligned_cols=67 Identities=21% Similarity=0.335 Sum_probs=47.1
Q ss_pred CcEEEEcCCC-chhhH-HHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccc---cCCCCeeEEEeC
Q 028547 49 QRILIVGCGN-SAFSE-GMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDE---FQTGSFDSVVDK 120 (207)
Q Consensus 49 ~~vLdiG~G~-G~~~~-~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~fD~v~~~ 120 (207)
.+|+-+|||. |.... .|...++ +|+.+|.+++.++.+..++ .+..+.+|..+..- ..-+..|++++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 4788888874 43332 3333455 8999999999998887775 57889999888521 234678888864
No 438
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.29 E-value=2.9 Score=28.30 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=50.7
Q ss_pred CcEEEEcCCC-chhh-HHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc---ccCCCCeeEEEeCcch
Q 028547 49 QRILIVGCGN-SAFS-EGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD---EFQTGSFDSVVDKGTL 123 (207)
Q Consensus 49 ~~vLdiG~G~-G~~~-~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~fD~v~~~~~l 123 (207)
.+|+-+|+|. |... ..+...|. +|+++|.+++.++.++. .....++..|..+.. ......+|+|+..-.-
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~----~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS----EFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT----TCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh----cCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 4899999875 4333 33444566 99999998865433221 123456666654421 1113468988864211
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
......+..+.+.+.+...++...
T Consensus 95 ----------~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 95 ----------DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp ----------HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred ----------cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 223344444555555555555443
No 439
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=84.22 E-value=8.1 Score=31.44 Aligned_cols=102 Identities=15% Similarity=0.122 Sum_probs=57.8
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---------------CCceEEEeccccccccCCC
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---------------PQLKYIKMDVRQMDEFQTG 112 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---------------~~~~~~~~d~~~~~~~~~~ 112 (207)
+|.-||+|. | .++..+++.|+ +|+++|.+++.++..++..... .++.+ ..|..+. -.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea----~~ 77 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA----VP 77 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH----GG
T ss_pred EEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH----Hh
Confidence 677888875 2 44556666777 9999999999888776632110 11221 1222221 12
Q ss_pred CeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 113 SFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 113 ~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
..|+|+..-.-..-..+..+.......++.+.+.|++|-+++..+
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 468887542111000001112367788889999998876665544
No 440
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.21 E-value=5.9 Score=29.79 Aligned_cols=83 Identities=11% Similarity=0.163 Sum_probs=52.8
Q ss_pred cEEEEcC-CC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 50 RILIVGC-GN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 50 ~vLdiG~-G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+|.-||+ |. | .++..+.+.|+ +|+++|.+++.++.+.+. .+.. .+..+. -...|+|+..-.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~-----g~~~--~~~~~~----~~~aDvVi~av~---- 76 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM-----GIPL--TDGDGW----IDEADVVVLALP---- 76 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT-----TCCC--CCSSGG----GGTCSEEEECSC----
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc-----CCCc--CCHHHH----hcCCCEEEEcCC----
Confidence 7999999 75 3 44555666676 899999999877766551 1221 122221 235799986422
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYI 154 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~ 154 (207)
.......++.+...++++.+++
T Consensus 77 ------~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 77 ------DNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ------HHHHHHHHHHHGGGSCTTCEEE
T ss_pred ------chHHHHHHHHHHHhCCCCCEEE
Confidence 2345777778878888776544
No 441
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.15 E-value=2.9 Score=31.24 Aligned_cols=74 Identities=14% Similarity=0.284 Sum_probs=53.1
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCe
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
++.+|-=|++.| ..+..+++.|. +|..+|.+++.++...+.+.. ..++.++.+|+.+.... .-+..
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 347777787776 45566677777 999999999988877776653 25788899999885211 12578
Q ss_pred eEEEeCcc
Q 028547 115 DSVVDKGT 122 (207)
Q Consensus 115 D~v~~~~~ 122 (207)
|+++.+.-
T Consensus 86 DiLVNNAG 93 (254)
T 4fn4_A 86 DVLCNNAG 93 (254)
T ss_dssp CEEEECCC
T ss_pred CEEEECCc
Confidence 99988754
No 442
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.55 E-value=6.3 Score=30.52 Aligned_cols=92 Identities=17% Similarity=0.234 Sum_probs=54.7
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC---CCCce------EEEeccccccccCCCCeeEEE
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN---RPQLK------YIKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~---~~~~~------~~~~d~~~~~~~~~~~fD~v~ 118 (207)
+|.-+|+|. | .++..+++.|. +|+.+|.+++.++..++...- ..... ....|..+. ...+|+|+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~vi 80 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA----VKDADVIL 80 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH----HTTCSEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH----HhcCCEEE
Confidence 789999986 3 44455566676 899999999887777664210 00000 011121111 13579888
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
..-.- ......++.+...++++..++..
T Consensus 81 ~~v~~----------~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 81 IVVPA----------IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp ECSCG----------GGHHHHHHHHGGGCCTTCEEEES
T ss_pred EeCCc----------hHHHHHHHHHHHhCCCCCEEEEc
Confidence 64222 23467778888888887765543
No 443
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=83.25 E-value=5.4 Score=30.20 Aligned_cols=108 Identities=11% Similarity=0.077 Sum_probs=62.0
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCC--HHHHHHHHHHcc-CCCCceEEEecccccccc---------CCCC
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDIS--SVVIEAMMKKYS-NRPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s--~~~i~~~~~~~~-~~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
+++|-.|++.| .++..+++.|+ +|+.++.+ ....+...+... ...++.++.+|+.+.... ..+.
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 128 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGG 128 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47888887766 45556677777 88888876 233333333222 124678888898875211 1246
Q ss_pred eeEEEeCcchhhhc--cCCCChhh-----------HHHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLL--CGSNSRQN-----------ATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~--~~~~~~~~-----------~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+++.+....... ....+.++ .-.+++.+.+.++++|.++.+.
T Consensus 129 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 89988765432110 00112222 2234455667777888877765
No 444
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.03 E-value=3.2 Score=31.95 Aligned_cols=74 Identities=16% Similarity=0.376 Sum_probs=51.3
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC---CCceEEEecccccccc---------CCCC
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR---PQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~---~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
++||--|++.| .++..+++.|+ +|++++.+++.++.+.+.+... .++.++.+|+.+...+ ..+.
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGP 87 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 47888888776 45566677787 8999999998777665544311 2678889998875211 1247
Q ss_pred eeEEEeCcch
Q 028547 114 FDSVVDKGTL 123 (207)
Q Consensus 114 fD~v~~~~~l 123 (207)
.|+++.+..+
T Consensus 88 id~lv~nAg~ 97 (319)
T 3ioy_A 88 VSILCNNAGV 97 (319)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987554
No 445
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=82.76 E-value=1.5 Score=34.16 Aligned_cols=89 Identities=19% Similarity=0.159 Sum_probs=56.7
Q ss_pred CCCcEEEEcC-C-CchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc-----ccCCCCeeEEE
Q 028547 47 HHQRILIVGC-G-NSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD-----EFQTGSFDSVV 118 (207)
Q Consensus 47 ~~~~vLdiG~-G-~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~fD~v~ 118 (207)
.+.+||-+|+ | .|..+..+++. |. +|+++ .+++.++.+++.- ...+. +-.+.. ......+|+|+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lG-----a~~i~-~~~~~~~~~~~~~~~~g~D~vi 221 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLG-----ATPID-ASREPEDYAAEHTAGQGFDLVY 221 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHT-----SEEEE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcC-----CCEec-cCCCHHHHHHHHhcCCCceEEE
Confidence 3459999994 3 47777777775 45 89999 7888888776642 12221 111110 01235799998
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.... ...+....+.|+++|.++...
T Consensus 222 d~~g--------------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 222 DTLG--------------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp ESSC--------------THHHHHHHHHEEEEEEEEESC
T ss_pred ECCC--------------cHHHHHHHHHHhcCCeEEEEc
Confidence 6411 135777889999999988754
No 446
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.59 E-value=13 Score=27.70 Aligned_cols=88 Identities=17% Similarity=0.260 Sum_probs=52.8
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCC-CeeEEEeCcchhh
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTG-SFDSVVDKGTLDS 125 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~fD~v~~~~~l~~ 125 (207)
+|.-||+|. | .++..+.+.|+ .+|+++|.+++.++.+++.- -......|..+. .. ..|+|+..-..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g----~~~~~~~~~~~~----~~~~aDvVilavp~-- 72 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----IIDEGTTSIAKV----EDFSPDFVMLSSPV-- 72 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----SCSEEESCGGGG----GGTCCSEEEECSCH--
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCC----CcccccCCHHHH----hcCCCCEEEEcCCH--
Confidence 678888875 3 44444555554 27999999998877765421 111111232222 12 57988865322
Q ss_pred hccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 126 LLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
......++++...++++.+++.
T Consensus 73 --------~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 73 --------RTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp --------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred --------HHHHHHHHHHHhhCCCCcEEEE
Confidence 3445777888888998875554
No 447
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=82.59 E-value=0.75 Score=36.35 Aligned_cols=100 Identities=11% Similarity=0.164 Sum_probs=55.9
Q ss_pred CcEEEEcCCC-chhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGN-SAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~-G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
++|+-+|+|. |.....++. .|. +|+++|.+++..+.+++.... .+.....+..++.. .-..+|+|+..-....-
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--RVELLYSNSAEIET-AVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--GSEEEECCHHHHHH-HHHTCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--eeEeeeCCHHHHHH-HHcCCCEEEECCCcCCC
Confidence 4999999964 444444444 466 999999999888777665432 12222212111110 11258999864322110
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
..+..+.+...+.++++|.++-+.+.
T Consensus 244 -------~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 244 -------RAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp -------SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred -------CCCeecCHHHHhhCCCCCEEEEEecC
Confidence 00011134456788999988766543
No 448
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=82.59 E-value=3.6 Score=28.41 Aligned_cols=100 Identities=11% Similarity=0.061 Sum_probs=57.4
Q ss_pred CCCCCCcEEEEcCCCchhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCC-CCceEEEeccccccccC----CCCeeEE
Q 028547 44 VPSHHQRILIVGCGNSAFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEFQ----TGSFDSV 117 (207)
Q Consensus 44 ~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~~----~~~fD~v 117 (207)
....+ .|||+|-|+|+.--++.+..+ ..++++|-.-.. ..... +.-.++.+|+.+..+.. ..+.-++
T Consensus 38 ~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~------hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~La 110 (174)
T 3iht_A 38 AGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS------HPDSTPPEAQLILGDIRETLPATLERFGATASLV 110 (174)
T ss_dssp TTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC------CGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEE
T ss_pred cCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc------CCCCCCchHheecccHHHHHHHHHHhcCCceEEE
Confidence 33445 999999999999999988755 599999853210 00011 34578889988863321 3334444
Q ss_pred EeCcchhhhccCCCCh--hhHHHHHHHHHHhcCCCcEEEE
Q 028547 118 VDKGTLDSLLCGSNSR--QNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 118 ~~~~~l~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
.+..- ++.... .....+-.-+..+|+|||+++-
T Consensus 111 HaD~G-----~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 111 HADLG-----GHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EECCC-----CSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EeecC-----CCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 43311 111000 1122222334678899998863
No 449
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=82.44 E-value=7 Score=29.26 Aligned_cols=109 Identities=17% Similarity=0.233 Sum_probs=59.3
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHH-HHHHHHHcc-CCCCceEEEecccccccc---------CCCC
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVV-IEAMMKKYS-NRPQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~-i~~~~~~~~-~~~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
++++|-.|++.| .++..+++.|+ +|++++.+... .+...+.+. ...++.++.+|+.+.... .-+.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 336777776655 34455566677 89988876532 333322222 124678888888764211 1136
Q ss_pred eeEEEeCcchhhhc-cCCCChhhH-----------HHHHHHHHHhcCCCcEEEEEE
Q 028547 114 FDSVVDKGTLDSLL-CGSNSRQNA-----------TQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 114 fD~v~~~~~l~~~~-~~~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.|+++.+....... ....+.+++ ..+++.+.+.++.+|.++.+.
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 89988765432210 000122222 224455666777778877765
No 450
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=82.37 E-value=5.1 Score=31.50 Aligned_cols=94 Identities=11% Similarity=0.123 Sum_probs=56.3
Q ss_pred CCCCcEEEEcCC--CchhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe---cccc-ccccCCCCeeEEEe
Q 028547 46 SHHQRILIVGCG--NSAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM---DVRQ-MDEFQTGSFDSVVD 119 (207)
Q Consensus 46 ~~~~~vLdiG~G--~G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~---d~~~-~~~~~~~~fD~v~~ 119 (207)
+.+.+||-.|++ .|.++..+++....+|+++. +++-++.+++.-. -.++.. |+.+ ......+.+|+|+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa----~~vi~~~~~~~~~~v~~~t~g~~d~v~d 237 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGA----EEVFDYRAPNLAQTIRTYTKNNLRYALD 237 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC----SEEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCC----cEEEECCCchHHHHHHHHccCCccEEEE
Confidence 344589999983 58888888775333888875 7777777765311 122221 1111 11112345999996
Q ss_pred CcchhhhccCCCChhhHHHHHHHHHHhc-CCCcEEEEEE
Q 028547 120 KGTLDSLLCGSNSRQNATQMLKEVWRVL-KDKGVYILVT 157 (207)
Q Consensus 120 ~~~l~~~~~~~~~~~~~~~~l~~~~~~L-~pgG~~~~~~ 157 (207)
.-. -...++.+.+.| +++|.++...
T Consensus 238 ~~g-------------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 238 CIT-------------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp SSC-------------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CCC-------------chHHHHHHHHHhhcCCCEEEEEe
Confidence 411 134567778888 6999988654
No 451
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=82.26 E-value=1.7 Score=33.47 Aligned_cols=90 Identities=18% Similarity=0.295 Sum_probs=56.5
Q ss_pred cEEEEcC-C-CchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEe-cc-cc-ccccCCCCeeEEEeCcch
Q 028547 50 RILIVGC-G-NSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKM-DV-RQ-MDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 50 ~vLdiG~-G-~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~-d~-~~-~~~~~~~~fD~v~~~~~l 123 (207)
+||-.|+ | .|..+..+++. |. ++++++.+++.++.+++. .. -.++.. +. .+ ........+|+|+..-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l-Ga---~~v~~~~~~~~~~~~~~~~~~~d~vid~~g- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL-GA---SEVISREDVYDGTLKALSKQQWQGAVDPVG- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH-TC---SEEEEHHHHCSSCCCSSCCCCEEEEEESCC-
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-CC---cEEEECCCchHHHHHHhhcCCccEEEECCc-
Confidence 7999997 3 47777777664 55 899999888777777653 21 122221 11 11 11122346999886411
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEe
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTY 158 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 158 (207)
. ..+....+.|+++|.++....
T Consensus 227 -----------~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 227 -----------G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp -----------T--HHHHHHHTTEEEEEEEEECCC
T ss_pred -----------H--HHHHHHHHhhcCCCEEEEEec
Confidence 1 257788899999999887653
No 452
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=82.26 E-value=4.8 Score=29.84 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=61.1
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCC---HHHHHHHHHHccC-CCCceEEEecccccccc---------CC
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDIS---SVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QT 111 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s---~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~ 111 (207)
++++|--|++.| .++..+++.|+ +|+.++.+ .+.++...+.+.. ..++.++.+|+.+.... .-
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 347888887766 34455666677 88887653 3344444444332 24678889998875211 12
Q ss_pred CCeeEEEeCcchhhhc-cCCCChhhHH-----------HHHHHHHHhcCCCcEEEEEE
Q 028547 112 GSFDSVVDKGTLDSLL-CGSNSRQNAT-----------QMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~-~~~~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~ 157 (207)
+..|+++.+..+.... ....+.+++. .+++.+.+.++++|.++.+.
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 4789998765432210 0011222222 33444556666778777654
No 453
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=82.13 E-value=3.5 Score=30.17 Aligned_cols=73 Identities=19% Similarity=0.286 Sum_probs=45.6
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccC---------CCCee
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQ---------TGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~---------~~~fD 115 (207)
++||-.|++.| .++..+++.|+ +|++++.++...+...+.+.. ..++.++.+|+.+..... .+..|
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 90 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 37777776543 33444555676 899999988766655444331 246788889988752111 13689
Q ss_pred EEEeCcc
Q 028547 116 SVVDKGT 122 (207)
Q Consensus 116 ~v~~~~~ 122 (207)
+|+.+..
T Consensus 91 ~vi~~Ag 97 (255)
T 1fmc_A 91 ILVNNAG 97 (255)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8887644
No 454
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=81.95 E-value=5.9 Score=29.78 Aligned_cols=75 Identities=21% Similarity=0.281 Sum_probs=52.5
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEecccccccc---------CCCCe
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
++++|--|++.| .++..+++.|+ +|+.++.+++.++...+.+... .++.++.+|+.+.... .-+..
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 347888887766 45556677777 9999999998877776665432 5688899998875211 12478
Q ss_pred eEEEeCcch
Q 028547 115 DSVVDKGTL 123 (207)
Q Consensus 115 D~v~~~~~l 123 (207)
|+++.+..+
T Consensus 107 D~lVnnAg~ 115 (283)
T 3v8b_A 107 DIVVANAGI 115 (283)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 998876544
No 455
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.93 E-value=4.7 Score=29.78 Aligned_cols=73 Identities=19% Similarity=0.347 Sum_probs=51.3
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC-CCceEEEecccccccc---------CCCCee
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR-PQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~-~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
+++|-.|++.| .++..+++.|+ +|+.++.+++.++.+.+.+... .++.++.+|+.+.... ..+..|
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 36777777665 45556677777 8999999998888777766533 4788899999875211 113689
Q ss_pred EEEeCcc
Q 028547 116 SVVDKGT 122 (207)
Q Consensus 116 ~v~~~~~ 122 (207)
+++.+..
T Consensus 86 ~lv~nAg 92 (257)
T 3imf_A 86 ILINNAA 92 (257)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9887654
No 456
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.77 E-value=12 Score=29.32 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=58.1
Q ss_pred CcEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC---CCCce----E-EEeccccccccCCCCeeEEE
Q 028547 49 QRILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN---RPQLK----Y-IKMDVRQMDEFQTGSFDSVV 118 (207)
Q Consensus 49 ~~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~---~~~~~----~-~~~d~~~~~~~~~~~fD~v~ 118 (207)
.+|.-||+|. +.++..+++.|. +|+..|.+++.++..++.-.. .+.+. + ...|..+. -...|+|+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea----~~~aDvVi 104 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKAS----LEGVTDIL 104 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHH----HTTCCEEE
T ss_pred CeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHH----HhcCCEEE
Confidence 3899999986 345566666676 899999999888777664221 01111 1 11222221 13568888
Q ss_pred eCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 119 DKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 119 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
..-. .......++++...++++..++..
T Consensus 105 laVp----------~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 105 IVVP----------SFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp ECCC----------HHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred ECCC----------HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6422 245678888888889887765543
No 457
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=81.77 E-value=0.86 Score=36.96 Aligned_cols=42 Identities=19% Similarity=0.437 Sum_probs=31.4
Q ss_pred CcEEEEcCCCchhhHHHHhc----C--CCcEEEEeCCHHHHHHHHHHc
Q 028547 49 QRILIVGCGNSAFSEGMVDD----G--YEDVVNVDISSVVIEAMMKKY 90 (207)
Q Consensus 49 ~~vLdiG~G~G~~~~~l~~~----~--~~~v~~~D~s~~~i~~~~~~~ 90 (207)
..|+|+|+|.|.++..++.. + ..+++.||+|+...+.-++++
T Consensus 139 ~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L 186 (432)
T 4f3n_A 139 RRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETL 186 (432)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHH
T ss_pred CeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHH
Confidence 39999999999988777653 2 247999999997655555443
No 458
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.58 E-value=3.3 Score=30.35 Aligned_cols=74 Identities=23% Similarity=0.386 Sum_probs=51.7
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCee
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
++||-.|++.| .++..+++.|+ +|+.++.+++.++...+.+.. ..++.++.+|+.+.... ..+..|
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGID 88 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47888888766 45666777787 899999999877776665542 24678888999875211 113689
Q ss_pred EEEeCcch
Q 028547 116 SVVDKGTL 123 (207)
Q Consensus 116 ~v~~~~~l 123 (207)
+++.+..+
T Consensus 89 ~li~~Ag~ 96 (253)
T 3qiv_A 89 YLVNNAAI 96 (253)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99887543
No 459
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.40 E-value=7.7 Score=31.67 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=58.1
Q ss_pred CccCHHHHHHhhCCC--CCCcEEEEcCCC-chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc-
Q 028547 32 KYPSLAPLIKLYVPS--HHQRILIVGCGN-SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD- 107 (207)
Q Consensus 32 ~~~~~~~~l~~~~~~--~~~~vLdiG~G~-G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~- 107 (207)
..+.+..+...+.+. ..++|+-+|+|. |..+....+..+ ++..+|.+++-.+.+.+.+ ++..++++|..+..
T Consensus 217 ~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~-~v~iIE~d~~r~~~la~~l---~~~~Vi~GD~td~~~ 292 (461)
T 4g65_A 217 ASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTY-SVKLIERNLQRAEKLSEEL---ENTIVFCGDAADQEL 292 (461)
T ss_dssp ETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHHHHC---TTSEEEESCTTCHHH
T ss_pred ccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcC-ceEEEecCHHHHHHHHHHC---CCceEEeccccchhh
Confidence 344566666554332 235899998876 555554555555 8999999998888877776 46789999999852
Q ss_pred --ccCCCCeeEEEeC
Q 028547 108 --EFQTGSFDSVVDK 120 (207)
Q Consensus 108 --~~~~~~fD~v~~~ 120 (207)
...-+..|++++.
T Consensus 293 L~ee~i~~~D~~ia~ 307 (461)
T 4g65_A 293 LTEENIDQVDVFIAL 307 (461)
T ss_dssp HHHTTGGGCSEEEEC
T ss_pred HhhcCchhhcEEEEc
Confidence 1234578988874
No 460
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=81.32 E-value=14 Score=27.23 Aligned_cols=74 Identities=19% Similarity=0.265 Sum_probs=50.7
Q ss_pred CCcEEEEcCCC--c---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC--CCCceEEEecccccccc---------CC
Q 028547 48 HQRILIVGCGN--S---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN--RPQLKYIKMDVRQMDEF---------QT 111 (207)
Q Consensus 48 ~~~vLdiG~G~--G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~--~~~~~~~~~d~~~~~~~---------~~ 111 (207)
++++|--|+++ | ..+..+++.|. +|+.++.+++.++.+.+.... ..++.++.+|+.+.... .-
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 44778778543 4 45667778887 999999998777777665543 24688899998875211 13
Q ss_pred CCeeEEEeCcc
Q 028547 112 GSFDSVVDKGT 122 (207)
Q Consensus 112 ~~fD~v~~~~~ 122 (207)
+..|+++.+..
T Consensus 85 G~iD~lvnnAg 95 (256)
T 4fs3_A 85 GNIDGVYHSIA 95 (256)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEeccc
Confidence 57898887644
No 461
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=81.30 E-value=5.1 Score=29.60 Aligned_cols=74 Identities=18% Similarity=0.313 Sum_probs=51.7
Q ss_pred CcEEEEcC-CCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCceEEEecccccccc---------CCCC
Q 028547 49 QRILIVGC-GNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQLKYIKMDVRQMDEF---------QTGS 113 (207)
Q Consensus 49 ~~vLdiG~-G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~~~~~~d~~~~~~~---------~~~~ 113 (207)
++||-.|+ |.| .++..+++.|+ +|+.++.+++.++...+.+... .++.++.+|+.+.... ..+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 101 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR 101 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 47888887 555 45566777787 8999999988777766655432 4788999999875211 1136
Q ss_pred eeEEEeCcch
Q 028547 114 FDSVVDKGTL 123 (207)
Q Consensus 114 fD~v~~~~~l 123 (207)
.|+++.+..+
T Consensus 102 id~li~~Ag~ 111 (266)
T 3o38_A 102 LDVLVNNAGL 111 (266)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCc
Confidence 8999877554
No 462
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=81.27 E-value=23 Score=30.90 Aligned_cols=99 Identities=14% Similarity=0.212 Sum_probs=66.3
Q ss_pred CcEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc-------------CC-C--CceEEEeccccccccC
Q 028547 49 QRILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS-------------NR-P--QLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 49 ~~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~-------------~~-~--~~~~~~~d~~~~~~~~ 110 (207)
++|--||+|+ +.++..++..|+ .|+..|++++.++.+++... .. . .......|...+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l---- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL---- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGG----
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHH----
Confidence 4889999987 355666777788 99999999998877665331 00 0 111112222222
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCc
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAP 161 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 161 (207)
...|+|+-. +++.+ +-...+++++.++++|+.+|--.|.+-+
T Consensus 392 -~~aDlVIEA-V~E~l-------~iK~~vf~~le~~~~~~aIlASNTSsl~ 433 (742)
T 3zwc_A 392 -STVDLVVEA-VFEDM-------NLKKKVFAELSALCKPGAFLCTNTSALN 433 (742)
T ss_dssp -GSCSEEEEC-CCSCH-------HHHHHHHHHHHHHSCTTCEEEECCSSSC
T ss_pred -hhCCEEEEe-ccccH-------HHHHHHHHHHhhcCCCCceEEecCCcCC
Confidence 356888864 45544 7889999999999999988876664443
No 463
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=81.14 E-value=5.9 Score=30.43 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=52.8
Q ss_pred cEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHH---ccC--CCCceEEEeccccccccCCCCeeEEEeCcc
Q 028547 50 RILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKK---YSN--RPQLKYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 50 ~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~---~~~--~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
+|+-+|+|. +.++..+++.|. +|+.++-++ .+..++. ... .....+....+..........+|+|+..-.
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 788899986 455666666776 999999876 2444443 111 122222111111110011236899886422
Q ss_pred hhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 123 LDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 123 l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
-. .....++.+...+.++..++...
T Consensus 81 ~~----------~~~~~l~~l~~~l~~~t~Iv~~~ 105 (320)
T 3i83_A 81 VV----------EGADRVGLLRDAVAPDTGIVLIS 105 (320)
T ss_dssp CC----------TTCCHHHHHTTSCCTTCEEEEEC
T ss_pred CC----------ChHHHHHHHHhhcCCCCEEEEeC
Confidence 22 23456788888888887666543
No 464
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.03 E-value=14 Score=27.18 Aligned_cols=90 Identities=11% Similarity=0.239 Sum_probs=54.8
Q ss_pred CcEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
.+|.-+|+|. | .++..+.+.|+..++.+|.+++..+.+.+.. .+.. ..+..+. ....|+|+..-.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~----g~~~-~~~~~~~----~~~~Dvvi~av~---- 77 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV----EAEY-TTDLAEV----NPYAKLYIVSLK---- 77 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT----TCEE-ESCGGGS----CSCCSEEEECCC----
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc----CCce-eCCHHHH----hcCCCEEEEecC----
Confidence 3788999974 3 3444555566623899999998877766653 2222 2233332 135799886422
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.......++.+...++++.+++-.+
T Consensus 78 ------~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 78 ------DSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp ------HHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred ------HHHHHHHHHHHHhhcCCCcEEEECC
Confidence 1344677777877887776555433
No 465
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=80.93 E-value=4.2 Score=30.90 Aligned_cols=75 Identities=19% Similarity=0.287 Sum_probs=52.9
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCe
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
+++||-.|++.| .++..+++.|+ +|+.++.+++.++.+.+.+.. ..++.++.+|+.+.... ..+..
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 347888888776 45566677787 899999999887777665542 25788899999885211 11368
Q ss_pred eEEEeCcch
Q 028547 115 DSVVDKGTL 123 (207)
Q Consensus 115 D~v~~~~~l 123 (207)
|+++.+..+
T Consensus 110 d~lvnnAg~ 118 (301)
T 3tjr_A 110 DVVFSNAGI 118 (301)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999877543
No 466
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.87 E-value=5 Score=29.77 Aligned_cols=72 Identities=17% Similarity=0.313 Sum_probs=51.3
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCee
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
+++|--|++.| .++..+++.|+ +|+.++.+++.++...+.+.. ..++.++.+|+.+.... ..+..|
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVD 90 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCS
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 47888888776 45566777787 899999998877776665442 25788899999885211 124789
Q ss_pred EEEeCc
Q 028547 116 SVVDKG 121 (207)
Q Consensus 116 ~v~~~~ 121 (207)
+++.+.
T Consensus 91 ~lv~nA 96 (264)
T 3ucx_A 91 VVINNA 96 (264)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 998765
No 467
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=80.66 E-value=4.5 Score=31.79 Aligned_cols=66 Identities=23% Similarity=0.344 Sum_probs=43.1
Q ss_pred CcEEEEcCCC-chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc--CCCCeeEEEeCc
Q 028547 49 QRILIVGCGN-SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF--QTGSFDSVVDKG 121 (207)
Q Consensus 49 ~~vLdiG~G~-G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~fD~v~~~~ 121 (207)
.+|+-+|||. |......+...+ +|+..|.+.+.++.+++ .+..+..|+.+...+ .-...|+|++..
T Consensus 17 mkilvlGaG~vG~~~~~~L~~~~-~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKDEF-DVYIGDVNNENLEKVKE------FATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHTT------TSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cEEEEECCCHHHHHHHHHHhcCC-CeEEEEcCHHHHHHHhc------cCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 4899999963 555554444445 89999999987776643 345566777654211 124679998753
No 468
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=80.56 E-value=2.9 Score=30.92 Aligned_cols=74 Identities=14% Similarity=0.209 Sum_probs=48.4
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccC---------C-CCe
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQ---------T-GSF 114 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~---------~-~~f 114 (207)
++||-.|++.| .++..+++.|+ +|++++.+++.++...+.+.. ..++.++.+|+.+..... - +..
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 37887777655 44556666777 899999988776655444321 235778888988752110 1 578
Q ss_pred eEEEeCcch
Q 028547 115 DSVVDKGTL 123 (207)
Q Consensus 115 D~v~~~~~l 123 (207)
|+++.+..+
T Consensus 89 d~lv~~Ag~ 97 (260)
T 2ae2_A 89 NILVNNAGI 97 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999876543
No 469
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=80.16 E-value=5.3 Score=29.83 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=49.6
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc--------CCCCeeEE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF--------QTGSFDSV 117 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~~~fD~v 117 (207)
+++|-.|++.| .++..+++.|+ +|+.++.+++.++...+.+. .++.++.+|+.+.... ..+..|++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELG--NRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 37888888776 45566677787 89999999988777766653 3688999998875211 12467888
Q ss_pred EeC
Q 028547 118 VDK 120 (207)
Q Consensus 118 ~~~ 120 (207)
+.+
T Consensus 108 v~~ 110 (281)
T 3ppi_A 108 VVA 110 (281)
T ss_dssp EEC
T ss_pred EEc
Confidence 876
No 470
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=79.95 E-value=7.4 Score=29.79 Aligned_cols=75 Identities=17% Similarity=0.341 Sum_probs=47.9
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCC------------HHHHHHHHHHcc-CCCCceEEEecccccccc--
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDIS------------SVVIEAMMKKYS-NRPQLKYIKMDVRQMDEF-- 109 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s------------~~~i~~~~~~~~-~~~~~~~~~~d~~~~~~~-- 109 (207)
++++|--|++.| .++..+++.|+ +|+++|.+ .+.++...+... ...++.++.+|+.+....
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 347777777666 45566677777 89999875 555554443332 225788889999875211
Q ss_pred -------CCCCeeEEEeCcch
Q 028547 110 -------QTGSFDSVVDKGTL 123 (207)
Q Consensus 110 -------~~~~fD~v~~~~~l 123 (207)
.-+..|+++.+..+
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 11478999877544
No 471
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=79.69 E-value=4.7 Score=33.33 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=53.4
Q ss_pred CCCcEEEEcCCC-chhhHHHHh-cCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchh
Q 028547 47 HHQRILIVGCGN-SAFSEGMVD-DGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLD 124 (207)
Q Consensus 47 ~~~~vLdiG~G~-G~~~~~l~~-~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 124 (207)
.+++|+-+|+|. |......++ .|. +|+++|.++.....+++. ...+ .++.+. ....|+|+..-.-.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~-----Ga~~--~~l~e~----l~~aDvVi~atgt~ 340 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMME-----GFDV--VTVEEA----IGDADIVVTATGNK 340 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-----TCEE--CCHHHH----GGGCSEEEECSSSS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-----CCEE--ecHHHH----HhCCCEEEECCCCH
Confidence 345999999875 554444444 455 999999999877666542 2222 233232 13579998642111
Q ss_pred hhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 125 SLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
.+ +-....+.+++||.++.+...
T Consensus 341 ~~------------i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 341 DI------------IMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp CS------------BCHHHHHHSCTTCEEEECSSS
T ss_pred HH------------HHHHHHHhcCCCcEEEEeCCC
Confidence 11 112556779999998776543
No 472
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=79.56 E-value=4.2 Score=30.53 Aligned_cols=71 Identities=14% Similarity=0.254 Sum_probs=46.2
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHcc--CCCCceEEEecccccccc---------CCCCe
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYS--NRPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~--~~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
++||-.|++.| .++..+++.|+ +|++++.+++.++...+.+. ...++.++.+|+.+.... ..+..
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 107 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGL 107 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 37887777655 34445666777 89999999877666554332 113578888998874211 01468
Q ss_pred eEEEeC
Q 028547 115 DSVVDK 120 (207)
Q Consensus 115 D~v~~~ 120 (207)
|+++.+
T Consensus 108 D~li~n 113 (286)
T 1xu9_A 108 DMLILN 113 (286)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999876
No 473
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=79.28 E-value=7.4 Score=29.50 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=55.3
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
+|.-||+|. | .++..+++.|+ +|+++|.+++.++.+.+. .+.+ ..+..+. . . .|+|+..-+
T Consensus 17 ~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~-----g~~~-~~~~~~~---~-~-aDvvi~~vp----- 79 (296)
T 3qha_A 17 KLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA-----GATL-ADSVADV---A-A-ADLIHITVL----- 79 (296)
T ss_dssp CEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT-----TCEE-CSSHHHH---T-T-SSEEEECCS-----
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC-----CCEE-cCCHHHH---H-h-CCEEEEECC-----
Confidence 788999886 3 45555666677 999999998776666543 2221 2233332 1 2 798886422
Q ss_pred cCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 128 CGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 128 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
........++.+...++++.+++-.+
T Consensus 80 ----~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 80 ----DDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp ----SHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred ----ChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 12345667788888888887765544
No 474
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=79.11 E-value=6.5 Score=29.42 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=51.8
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCee
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
+++|--|++.| .++..+++.|+ +|+.++.+++.++...+.+.. ..++.++.+|+.+.... .-+..|
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 37888887766 45566677787 899999998877776665543 25788899998875211 124689
Q ss_pred EEEeCcch
Q 028547 116 SVVDKGTL 123 (207)
Q Consensus 116 ~v~~~~~l 123 (207)
+++.+...
T Consensus 104 ~lv~nAg~ 111 (279)
T 3sju_A 104 ILVNSAGR 111 (279)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 98876543
No 475
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=79.01 E-value=9.9 Score=27.63 Aligned_cols=72 Identities=11% Similarity=0.280 Sum_probs=46.9
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCc-eEEEeccccccccC--------CCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQL-KYIKMDVRQMDEFQ--------TGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~-~~~~~d~~~~~~~~--------~~~fD~ 116 (207)
++||-.|++.| .++..+++.|+ +|++++.+++.++...+.+. .++ .++.+|+.+..... .+..|+
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELG--AAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG--GGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc--ccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 37887777655 44555666777 89999998877666554442 245 77888888752111 146899
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+...
T Consensus 89 li~~Ag~ 95 (254)
T 2wsb_A 89 LVNSAGI 95 (254)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 8876543
No 476
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=78.87 E-value=7.1 Score=29.18 Aligned_cols=74 Identities=15% Similarity=0.341 Sum_probs=50.0
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD~ 116 (207)
+++|-.|++.| .++..+++.|+ +|+.++.+++.++...+.+....++.++.+|+.+.... .-+..|+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 100 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG 100 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 37888887665 45556677777 89999999887776665544324678888998874211 1246799
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+..+
T Consensus 101 lvnnAG~ 107 (272)
T 2nwq_A 101 LINNAGL 107 (272)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8876543
No 477
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=78.85 E-value=17 Score=27.16 Aligned_cols=87 Identities=15% Similarity=0.204 Sum_probs=52.1
Q ss_pred cEEEEcCCC-c-hhhHHHHhcCC-CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 50 RILIVGCGN-S-AFSEGMVDDGY-EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 50 ~vLdiG~G~-G-~~~~~l~~~~~-~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+|.-||+|. | .++..+.+.+. .+|+++|.+++.++.+.+.- .......+..+. -...|+|+..-..
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g----~~~~~~~~~~~~----~~~aDvVilavp~--- 76 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERG----IVDEATADFKVF----AALADVIILAVPI--- 76 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT----SCSEEESCTTTT----GGGCSEEEECSCH---
T ss_pred eEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcC----CcccccCCHHHh----hcCCCEEEEcCCH---
Confidence 788899886 3 44455555532 38999999998777665421 111112232222 1357988865322
Q ss_pred ccCCCChhhHHHHHHHHHHh-cCCCcEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRV-LKDKGVYI 154 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~-L~pgG~~~ 154 (207)
......++.+... ++++.+++
T Consensus 77 -------~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 77 -------KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp -------HHHHHHHHHHHTSCCCTTCEEE
T ss_pred -------HHHHHHHHHHHhcCCCCCCEEE
Confidence 3346777888877 88776555
No 478
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=78.84 E-value=5.1 Score=31.37 Aligned_cols=87 Identities=10% Similarity=0.105 Sum_probs=52.4
Q ss_pred CcEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
.+|.-||+|. +.++..+.+.|+ +|++.|.+++.++.+.+. .+.. ..+..+.........|+|+..-+.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~-----G~~~-~~~~~e~~~~a~~~aDlVilavP~--- 78 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDE-----GFDV-SADLEATLQRAAAEDALIVLAVPM--- 78 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHT-----TCCE-ESCHHHHHHHHHHTTCEEEECSCH---
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-----CCee-eCCHHHHHHhcccCCCEEEEeCCH---
Confidence 3889999885 456666677776 999999999888777543 2221 223222210001135888865433
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVY 153 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~ 153 (207)
......++.+... +|+.++
T Consensus 79 -------~~~~~vl~~l~~~-~~~~iv 97 (341)
T 3ktd_A 79 -------TAIDSLLDAVHTH-APNNGF 97 (341)
T ss_dssp -------HHHHHHHHHHHHH-CTTCCE
T ss_pred -------HHHHHHHHHHHcc-CCCCEE
Confidence 3446677777775 676443
No 479
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=78.77 E-value=6.2 Score=29.31 Aligned_cols=71 Identities=21% Similarity=0.359 Sum_probs=49.8
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD~ 116 (207)
++||--|++.| ..+..+++.|+ +|..+|.+++..+...+. ..++.++++|+.+.... .-+..|+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKE---RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh---cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36777788777 45667777887 999999998776655443 35678889999875211 1257899
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+...
T Consensus 79 LVNNAG~ 85 (247)
T 3ged_A 79 LVNNACR 85 (247)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8877543
No 480
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=78.74 E-value=12 Score=27.86 Aligned_cols=85 Identities=4% Similarity=0.020 Sum_probs=51.3
Q ss_pred cEEEEcCCC-ch-hhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhhc
Q 028547 50 RILIVGCGN-SA-FSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSLL 127 (207)
Q Consensus 50 ~vLdiG~G~-G~-~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~ 127 (207)
+|.-+|+|. |. ++..+.+ |+ +|+.+|.+++..+.+.+. .+... +..+. -...|+|+..-.-.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~-----g~~~~--~~~~~----~~~~D~vi~~v~~~--- 66 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEE-----FGSEA--VPLER----VAEARVIFTCLPTT--- 66 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHH-----HCCEE--CCGGG----GGGCSEEEECCSSH---
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHC-----CCccc--CHHHH----HhCCCEEEEeCCCh---
Confidence 678889986 43 4555666 76 899999998877666553 11111 11121 13579888642211
Q ss_pred cCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 128 CGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 128 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
......++.+...+++|..++..
T Consensus 67 ------~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 67 ------REVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp ------HHHHHHHHHHTTTCCTTEEEEEC
T ss_pred ------HHHHHHHHHHHhhCCCCCEEEEC
Confidence 23455667777788877665543
No 481
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=78.74 E-value=7.3 Score=28.04 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=49.2
Q ss_pred cEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc------CCCCeeEEEeC
Q 028547 50 RILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF------QTGSFDSVVDK 120 (207)
Q Consensus 50 ~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~~fD~v~~~ 120 (207)
+||-.|++.| .++..+++.|+ +|+.++.+++.++...+.+. .++.++.+|+.+.... -.+.+|+++.+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLS--NNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCS--SCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh--hccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence 5777787766 45556667777 89999999988877766552 4678889998875211 12345888876
Q ss_pred cch
Q 028547 121 GTL 123 (207)
Q Consensus 121 ~~l 123 (207)
...
T Consensus 80 Ag~ 82 (230)
T 3guy_A 80 AGS 82 (230)
T ss_dssp CCC
T ss_pred CCc
Confidence 543
No 482
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=78.63 E-value=4.7 Score=30.13 Aligned_cols=75 Identities=12% Similarity=0.212 Sum_probs=48.0
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCee
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
++++|--|++.| ..+..+++.|. +|..++.+++..+.+++......+..++.+|+.+.... .-+..|
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD 85 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD 85 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 447788888777 35567777787 88888876544333332222235778899998875211 135789
Q ss_pred EEEeCcch
Q 028547 116 SVVDKGTL 123 (207)
Q Consensus 116 ~v~~~~~l 123 (207)
+++.+.-+
T Consensus 86 iLVNnAGi 93 (258)
T 4gkb_A 86 GLVNNAGV 93 (258)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99887654
No 483
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=78.62 E-value=4.8 Score=30.20 Aligned_cols=74 Identities=12% Similarity=0.222 Sum_probs=46.6
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCee
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
++||-.|++.| .++..+++.|. +|++++-+++..+...+.+.. ..++.++.+|+.+.... ..+..|
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id 123 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 123 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 36787776654 33444555566 888888887766655544432 24678888998875211 124689
Q ss_pred EEEeCcch
Q 028547 116 SVVDKGTL 123 (207)
Q Consensus 116 ~v~~~~~l 123 (207)
+++.+...
T Consensus 124 ~li~~Ag~ 131 (285)
T 2c07_A 124 ILVNNAGI 131 (285)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99876543
No 484
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=78.38 E-value=1.6 Score=34.41 Aligned_cols=93 Identities=18% Similarity=0.207 Sum_probs=53.2
Q ss_pred CCCcEEEEc-CC-CchhhHHHHhc-CCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccc-c-cCCCCeeEEEeCc
Q 028547 47 HHQRILIVG-CG-NSAFSEGMVDD-GYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMD-E-FQTGSFDSVVDKG 121 (207)
Q Consensus 47 ~~~~vLdiG-~G-~G~~~~~l~~~-~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~-~-~~~~~fD~v~~~~ 121 (207)
.+.+||-.| +| .|..+..+++. |. +|++++ +++..+.+++ +.. -.++..+-.+.. . .....+|+|+...
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~-lGa---~~v~~~~~~~~~~~~~~~~g~D~vid~~ 256 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRK-LGA---DDVIDYKSGSVEEQLKSLKPFDFILDNV 256 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH-TTC---SEEEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHH-cCC---CEEEECCchHHHHHHhhcCCCCEEEECC
Confidence 335999999 34 47777777765 44 899888 6666666644 221 112211111110 0 1124699998642
Q ss_pred chhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 122 TLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 122 ~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
.-. ...+....+.|+++|.++...
T Consensus 257 g~~------------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 257 GGS------------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CTT------------HHHHGGGGBCSSSCCEEEESC
T ss_pred CCh------------hhhhHHHHHhhcCCcEEEEeC
Confidence 111 123566678899999987654
No 485
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.35 E-value=19 Score=29.49 Aligned_cols=96 Identities=15% Similarity=0.157 Sum_probs=57.7
Q ss_pred CcEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHH-HHHHHH----ccCC-----------CCceEEEeccccccccC
Q 028547 49 QRILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVI-EAMMKK----YSNR-----------PQLKYIKMDVRQMDEFQ 110 (207)
Q Consensus 49 ~~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i-~~~~~~----~~~~-----------~~~~~~~~d~~~~~~~~ 110 (207)
++|--||+|. +.++..+++.|+ +|+++|.+++.. ...++. .... .++.+ ..|...
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~a----- 127 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHK----- 127 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGG-----
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHH-----
Confidence 4889999986 466677777888 999999999721 111111 1110 12222 223321
Q ss_pred CCCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEEEEeC
Q 028547 111 TGSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYILVTYG 159 (207)
Q Consensus 111 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 159 (207)
-...|+||..-+ . +......+++++...++|+.++...+.+
T Consensus 128 l~~aDlVIeAVp-e-------~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 128 LSNCDLIVESVI-E-------DMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp CTTCSEEEECCC-S-------CHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred HccCCEEEEcCC-C-------CHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 245799986421 1 2245567889999999998887654433
No 486
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=78.17 E-value=1.5 Score=33.15 Aligned_cols=55 Identities=20% Similarity=0.245 Sum_probs=33.2
Q ss_pred CCCeeEEEeCcch----hhhc-cCCCChhhHHHHHHHHHHhcCCCcEEEEEEeCCcccccc
Q 028547 111 TGSFDSVVDKGTL----DSLL-CGSNSRQNATQMLKEVWRVLKDKGVYILVTYGAPIYRLG 166 (207)
Q Consensus 111 ~~~fD~v~~~~~l----~~~~-~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~ 166 (207)
.+.||+|+.+--- ||.- |. +......-+-....+.|+|||.+++..|+-......
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCe-DHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE 268 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCV-DHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSE 268 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHH-HHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHH
T ss_pred CCceeEEEEecCCccccchHHHHH-HHHHHHHHHHHHHHhhcCCCceEEEEeecccccchH
Confidence 3799999986221 2210 00 000133444555678999999999999876655444
No 487
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=78.00 E-value=16 Score=25.85 Aligned_cols=99 Identities=14% Similarity=0.152 Sum_probs=56.9
Q ss_pred cEEEEcCCC--c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 50 RILIVGCGN--S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 50 ~vLdiG~G~--G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
+||-.|+.. | .+...+++.|+ +|++++-++....... ..++.++.+|+.+.....-..+|+|+......+-
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~ 75 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRL-----GATVATLVKEPLVLTEADLDSVDAVVDALSVPWG 75 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHT-----CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTT
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccccccccc-----CCCceEEecccccccHhhcccCCEEEECCccCCC
Confidence 567777532 2 33344555676 9999998886554321 1478999999988632122467988876443210
Q ss_pred ccCCCChhhHHHHHHHHHHhcCC-CcEEEEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKD-KGVYILVT 157 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~p-gG~~~~~~ 157 (207)
............++.+.++. |+.+++++
T Consensus 76 ---~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 76 ---SGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp ---SSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred ---cchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 11123334445666666654 45555553
No 488
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=77.98 E-value=10 Score=28.94 Aligned_cols=93 Identities=15% Similarity=0.122 Sum_probs=51.7
Q ss_pred cEEEEcCCC--chhhHHHHhcCCCcEEEEeCCHHHHHHHHHHc---cC-CCCceEEEeccccccccCCCCeeEEEeCcch
Q 028547 50 RILIVGCGN--SAFSEGMVDDGYEDVVNVDISSVVIEAMMKKY---SN-RPQLKYIKMDVRQMDEFQTGSFDSVVDKGTL 123 (207)
Q Consensus 50 ~vLdiG~G~--G~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~---~~-~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l 123 (207)
+|.-+|+|. +.++..+++.|. +|+.++-++ .+..++.- .. .....+....+... +-....+|+|+..-.-
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~D~vilavk~ 79 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGE-DVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRA-PEEIGPMDLVLVGLKT 79 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESC-HHHHCCCSEEEECCCG
T ss_pred EEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecC-HHHcCCCCEEEEecCC
Confidence 788899986 355666677776 899999876 34444321 00 01111100111111 0012468988864222
Q ss_pred hhhccCCCChhhHHHHHHHHHHhcCCCcEEEEE
Q 028547 124 DSLLCGSNSRQNATQMLKEVWRVLKDKGVYILV 156 (207)
Q Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 156 (207)
......++.+...+.++..++..
T Consensus 80 ----------~~~~~~l~~l~~~l~~~~~iv~l 102 (312)
T 3hn2_A 80 ----------FANSRYEELIRPLVEEGTQILTL 102 (312)
T ss_dssp ----------GGGGGHHHHHGGGCCTTCEEEEC
T ss_pred ----------CCcHHHHHHHHhhcCCCCEEEEe
Confidence 23456788888889888766543
No 489
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=77.98 E-value=8.6 Score=28.43 Aligned_cols=73 Identities=16% Similarity=0.250 Sum_probs=48.0
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC---------CCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ---------TGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~---------~~~fD~ 116 (207)
++||-.|++.| .++..+++.|+ +|++++.++...+...+.+....++.++.+|+.+..... .+..|+
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 95 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 95 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 37888887655 34455666777 899999988766555544433236888999988752110 136899
Q ss_pred EEeCcc
Q 028547 117 VVDKGT 122 (207)
Q Consensus 117 v~~~~~ 122 (207)
++.+..
T Consensus 96 li~~Ag 101 (278)
T 2bgk_A 96 MFGNVG 101 (278)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886643
No 490
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.83 E-value=13 Score=26.77 Aligned_cols=69 Identities=14% Similarity=0.142 Sum_probs=43.7
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCc-eEEEeccccccccCCCCeeEEEeCcc
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQL-KYIKMDVRQMDEFQTGSFDSVVDKGT 122 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~fD~v~~~~~ 122 (207)
+++||-.|+..| .+...+++.|+ +|++++-++...+.... .++ .++.+|+.+.....-+..|+|+....
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRE-----RGASDIVVANLEEDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH-----TTCSEEEECCTTSCCGGGGTTCSEEEECCC
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHh-----CCCceEEEcccHHHHHHHHcCCCEEEECCC
Confidence 348888876432 34445556677 99999988766554433 257 88888886221112246899987644
No 491
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=77.83 E-value=12 Score=30.79 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=59.2
Q ss_pred CCcEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCC--CCc-----------eEE-EeccccccccCC
Q 028547 48 HQRILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNR--PQL-----------KYI-KMDVRQMDEFQT 111 (207)
Q Consensus 48 ~~~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~--~~~-----------~~~-~~d~~~~~~~~~ 111 (207)
..+|.-+|+|. | .++..+++.|+ +|+++|.+++.++..++..... +.+ .+. ..|..+. -
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a----~ 82 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAA----V 82 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHH----H
T ss_pred CceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHH----h
Confidence 35899999985 4 45566777777 9999999999888877642100 111 111 1122111 1
Q ss_pred CCeeEEEeCcchhhhccCCCChhhHHHHHHHHHHhcCCCcEEEE
Q 028547 112 GSFDSVVDKGTLDSLLCGSNSRQNATQMLKEVWRVLKDKGVYIL 155 (207)
Q Consensus 112 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 155 (207)
...|+|+..-.-..-..+..+.......++.+.+.|+++.+++.
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~ 126 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD 126 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 24687775411100000111225678888899999998766644
No 492
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=77.79 E-value=2.9 Score=30.88 Aligned_cols=74 Identities=11% Similarity=0.250 Sum_probs=51.1
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEeccccccccC--------CCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEFQ--------TGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~~--------~~~fD~ 116 (207)
+++|-.|++.| .++..+++.|+ +|+.++.+++.++...+.+.. ..++.++.+|+.+..... .+..|+
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~ 86 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEV 86 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceE
Confidence 47888888776 45566777787 899999988766666555432 246888999988752110 157899
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+..+
T Consensus 87 lv~nAg~ 93 (252)
T 3h7a_A 87 TIFNVGA 93 (252)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 8876544
No 493
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=77.78 E-value=7 Score=28.43 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=48.2
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccC---------CCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQ---------TGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~---------~~~fD~ 116 (207)
++||-.|++.| .++..+++.|+ +|++++.++...+...+......++.++.+|+.+..... .+.+|+
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 36777776554 34445566677 899999988777666555443346888999988752110 135898
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+...
T Consensus 86 li~~Ag~ 92 (251)
T 1zk4_A 86 LVNNAGI 92 (251)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8876543
No 494
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=77.64 E-value=4.3 Score=30.02 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=50.6
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCe
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSF 114 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~f 114 (207)
+++||-.|++.| .++..+++.|+ +|+.++.+++.++...+.+.. ..++.++.+|+.+.... ..+..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 107 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC 107 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 347887787665 44556666777 899999998877776665432 24678888998875211 11468
Q ss_pred eEEEeCcch
Q 028547 115 DSVVDKGTL 123 (207)
Q Consensus 115 D~v~~~~~l 123 (207)
|+++.+...
T Consensus 108 d~lv~~Ag~ 116 (262)
T 3rkr_A 108 DVLVNNAGV 116 (262)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 998876544
No 495
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=77.63 E-value=14 Score=27.71 Aligned_cols=86 Identities=21% Similarity=0.246 Sum_probs=54.5
Q ss_pred cEEEEcCCC--chhhHHHHhcCC--CcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhh
Q 028547 50 RILIVGCGN--SAFSEGMVDDGY--EDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDS 125 (207)
Q Consensus 50 ~vLdiG~G~--G~~~~~l~~~~~--~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 125 (207)
+|.-||||. +.++..+.+.|+ .+|+.+|.+++.++.+.+.+ .+.+ ..|..+. -...|+|+..-.
T Consensus 5 ~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~----gi~~-~~~~~~~----~~~aDvVilav~--- 72 (280)
T 3tri_A 5 NITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC----GVHT-TQDNRQG----ALNADVVVLAVK--- 72 (280)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT----CCEE-ESCHHHH----HSSCSEEEECSC---
T ss_pred EEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc----CCEE-eCChHHH----HhcCCeEEEEeC---
Confidence 788899985 345555666664 38999999998887776653 2332 1222222 124698886422
Q ss_pred hccCCCChhhHHHHHHHHHHh-cCCCcEEE
Q 028547 126 LLCGSNSRQNATQMLKEVWRV-LKDKGVYI 154 (207)
Q Consensus 126 ~~~~~~~~~~~~~~l~~~~~~-L~pgG~~~ 154 (207)
.......++++... ++++-+++
T Consensus 73 -------p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 73 -------PHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp -------GGGHHHHHHHHHHHHHTTTCEEE
T ss_pred -------HHHHHHHHHHHHhhccCCCeEEE
Confidence 24567888888887 77664544
No 496
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=77.53 E-value=7.8 Score=28.24 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=50.3
Q ss_pred CCcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc-----CCCCeeEEEe
Q 028547 48 HQRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF-----QTGSFDSVVD 119 (207)
Q Consensus 48 ~~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~fD~v~~ 119 (207)
+++||-.|++.| .++..+++.|+ +|+.++.+++.++...+.+.. ++.+..+|+.+.... ..+..|+++.
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKD--NYTIEVCNLANKEECSNLISKTSNLDILVC 90 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCS--SEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhcc--CccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 348888887765 45556667777 899999999887777665543 678888888774211 1246899887
Q ss_pred Ccch
Q 028547 120 KGTL 123 (207)
Q Consensus 120 ~~~l 123 (207)
+...
T Consensus 91 ~Ag~ 94 (249)
T 3f9i_A 91 NAGI 94 (249)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 7544
No 497
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=77.24 E-value=7.5 Score=30.60 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=55.4
Q ss_pred CcEEEEcCCC-c-hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEeccccccccCCCCeeEEEeCcchhhh
Q 028547 49 QRILIVGCGN-S-AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEFQTGSFDSVVDKGTLDSL 126 (207)
Q Consensus 49 ~~vLdiG~G~-G-~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~ 126 (207)
.+|.-||+|. | .++..+++.|+ +|+++|.+++.++.+.+. .+.. ..+..+.. ......|+|+..-.-
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~-----g~~~-~~s~~e~~-~~a~~~DvVi~~vp~--- 91 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE-----GIAG-ARSIEEFC-AKLVKPRVVWLMVPA--- 91 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT-----TCBC-CSSHHHHH-HHSCSSCEEEECSCG---
T ss_pred CEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC-----CCEE-eCCHHHHH-hcCCCCCEEEEeCCH---
Confidence 3788998875 3 44556666777 999999999877766543 1111 12222221 011345888864221
Q ss_pred ccCCCChhhHHHHHHHHHHhcCCCcEEEEEE
Q 028547 127 LCGSNSRQNATQMLKEVWRVLKDKGVYILVT 157 (207)
Q Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 157 (207)
......++.+...|++|.+++-.+
T Consensus 92 -------~~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 92 -------AVVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp -------GGHHHHHHHHGGGCCTTCEEEECS
T ss_pred -------HHHHHHHHHHHhhCCCCCEEEeCC
Confidence 245667788888888877665443
No 498
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=76.92 E-value=11 Score=28.05 Aligned_cols=71 Identities=18% Similarity=0.335 Sum_probs=43.3
Q ss_pred CcEEEEcCC--Cc---hhhHHHHhcCCCcEEEEeCCHH---HHHHHHHHccCCCCceEEEecccccccc---------CC
Q 028547 49 QRILIVGCG--NS---AFSEGMVDDGYEDVVNVDISSV---VIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QT 111 (207)
Q Consensus 49 ~~vLdiG~G--~G---~~~~~l~~~~~~~v~~~D~s~~---~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~ 111 (207)
++||-.|++ .| .++..+++.|+ +|+.++.++. .++...+.. ..+.++.+|+.+.... ..
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQEL---NSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 378888875 33 34445566676 8999987764 333332222 2467888998875211 12
Q ss_pred CCeeEEEeCcch
Q 028547 112 GSFDSVVDKGTL 123 (207)
Q Consensus 112 ~~fD~v~~~~~l 123 (207)
+..|+++.+..+
T Consensus 83 g~id~lv~nAg~ 94 (275)
T 2pd4_A 83 GSLDFIVHSVAF 94 (275)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478998877543
No 499
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=76.70 E-value=9.9 Score=27.88 Aligned_cols=72 Identities=19% Similarity=0.311 Sum_probs=51.1
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccCCCCceEEEecccccccc---------CCCCeeE
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSNRPQLKYIKMDVRQMDEF---------QTGSFDS 116 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~~~fD~ 116 (207)
++||-.|++.| .++..+++.|+ +|+.++.+++.++...+... .++.++.+|+.+.... ..+..|+
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIG--DAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 47888888776 45667777787 89999999988777766553 3678889998875211 1136898
Q ss_pred EEeCcch
Q 028547 117 VVDKGTL 123 (207)
Q Consensus 117 v~~~~~l 123 (207)
++.+...
T Consensus 87 li~~Ag~ 93 (261)
T 3n74_A 87 LVNNAGI 93 (261)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 8876543
No 500
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=76.60 E-value=6 Score=28.81 Aligned_cols=74 Identities=12% Similarity=0.270 Sum_probs=50.4
Q ss_pred CcEEEEcCCCc---hhhHHHHhcCCCcEEEEeCCHHHHHHHHHHccC-CCCceEEEecccccccc---------CCCCee
Q 028547 49 QRILIVGCGNS---AFSEGMVDDGYEDVVNVDISSVVIEAMMKKYSN-RPQLKYIKMDVRQMDEF---------QTGSFD 115 (207)
Q Consensus 49 ~~vLdiG~G~G---~~~~~l~~~~~~~v~~~D~s~~~i~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~~~fD 115 (207)
+++|-.|++.| .++..+++.|+ +|+.++.++...+...+.+.. ..++.++.+|+.+.... ..+..|
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 37777777665 45566677777 899999998877766655432 24788899998875211 234689
Q ss_pred EEEeCcch
Q 028547 116 SVVDKGTL 123 (207)
Q Consensus 116 ~v~~~~~l 123 (207)
+++.+..+
T Consensus 85 ~li~~Ag~ 92 (247)
T 3lyl_A 85 ILVNNAGI 92 (247)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 98876543
Done!