Query 028548
Match_columns 207
No_of_seqs 234 out of 1176
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 22:09:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028548.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028548hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1txo_A Putative bacterial enzy 99.9 4.4E-23 1.5E-27 171.5 9.8 119 57-183 5-135 (237)
2 3kdj_B Protein phosphatase 2C 99.9 2.8E-22 9.6E-27 174.7 13.0 121 61-182 13-162 (316)
3 2pk0_A Serine/threonine protei 99.9 5E-22 1.7E-26 166.3 12.5 123 59-183 8-143 (250)
4 3qn1_B Protein phosphatase 2C 99.9 2.1E-22 7.2E-27 177.4 10.5 123 57-182 16-191 (337)
5 2j82_A TPPHA, protein serine-t 99.9 5.5E-22 1.9E-26 165.0 11.7 122 59-183 3-139 (240)
6 2iq1_A Protein phosphatase 2C 99.9 1.1E-21 3.8E-26 167.5 10.9 119 61-189 12-147 (274)
7 2p8e_A PPM1B beta isoform vari 99.9 3.5E-22 1.2E-26 173.5 7.9 131 54-189 23-177 (307)
8 4da1_A Protein phosphatase 1K, 99.9 1.4E-21 4.6E-26 175.4 11.3 115 60-182 125-256 (389)
9 2i0o_A Ser/Thr phosphatase; be 99.9 4.3E-21 1.5E-25 166.3 12.7 124 54-188 22-174 (304)
10 2i44_A Serine-threonine phosph 99.8 3E-21 1E-25 168.2 11.0 126 58-188 23-184 (324)
11 1a6q_A Phosphatase 2C; catalyt 99.8 3.2E-21 1.1E-25 173.0 10.5 129 54-188 21-169 (382)
12 2jfr_A Ser-Thr phosphatase MSP 99.8 4.5E-21 1.5E-25 159.0 10.2 118 57-183 6-132 (234)
13 3rnr_A Stage II sporulation E 99.8 2E-20 6.9E-25 154.2 11.2 102 82-183 9-113 (211)
14 2j4o_A Mitogen-activated prote 99.8 6.7E-21 2.3E-25 171.7 7.6 130 54-188 26-212 (401)
15 2irm_A Mitogen-activated prote 99.8 1.2E-20 4.1E-25 167.4 7.5 122 62-188 25-202 (358)
16 2pnq_A [pyruvate dehydrogenase 99.8 1.7E-19 5.8E-24 165.7 8.8 120 63-182 43-244 (467)
17 2isn_A NYSGXRC-8828Z, phosphat 99.8 2.3E-18 8E-23 153.3 12.4 114 58-182 14-202 (364)
18 3d8k_A PP2C, protein phosphata 99.7 6.1E-18 2.1E-22 151.4 6.9 111 61-182 17-194 (377)
19 3t91_A Stage II sporulation pr 99.4 3.6E-12 1.2E-16 106.0 14.1 122 50-180 3-131 (242)
20 3pu9_A Protein serine/threonin 99.2 5.9E-10 2E-14 93.2 15.9 122 51-181 7-135 (242)
21 3zt9_A Serine phosphatase; hyd 98.8 4.3E-08 1.5E-12 79.2 11.6 113 55-178 4-118 (193)
22 3f79_A Probable two-component 98.7 5.3E-07 1.8E-11 75.1 14.2 121 55-180 38-167 (255)
23 3ke6_A Protein RV1364C/MT1410; 97.6 0.0023 7.7E-08 56.9 15.2 118 55-180 36-159 (399)
24 3eq2_A Probable two-component 93.7 1.7 5.7E-05 37.5 13.9 116 55-178 177-304 (394)
25 2oq8_A ORF157, hypothetical pr 26.4 9.4 0.00032 28.6 -0.9 27 167-193 80-117 (160)
26 3ii2_A ORF157, putative unchar 24.6 9.4 0.00032 28.6 -1.2 27 167-193 77-114 (157)
No 1
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.88 E-value=4.4e-23 Score=171.52 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=87.7
Q ss_pred EEEEEecCCCCCCCCCCceEEEeccCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHHHH-
Q 028548 57 VGTHLIPHPNKVERGGEDAFFVSCYNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKAHA- 135 (207)
Q Consensus 57 ~~~~~~~~~g~~R~~nEDa~~~~~~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A~~- 135 (207)
+.....+++|++|+.|||++++.. .+|+|||||||+..++.+|..+++.+.+.+ .. ....++.+.|.+++.
T Consensus 5 ~~~~~~s~~G~~r~~nED~~~~~~---~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~----~~-~~~~~~~~~l~~a~~~ 76 (237)
T 1txo_A 5 LRYAARSDRGLVRANNEDSVYAGA---RLLALADGMGGHAAGEVASQLVIAALAHLD----DD-EPGGDLLAKLDAAVRA 76 (237)
T ss_dssp EEEEEEEECCSSCSSCCEEEEECS---SEEEEEEEECTTTHHHHHHHHHHHHHGGGG----SS-CCCSCHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCcCCCccccCC---CEEEEEeCCCCcHHHHHHHHHHHHHHHHHh----hh-CCchhHHHHHHHHHHH
Confidence 344556789988999999998855 899999999999988888877776654432 11 112244444443332
Q ss_pred -----------ccCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEECCeEEEeCcceee
Q 028548 136 -----------ATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEH 183 (207)
Q Consensus 136 -----------~~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR~g~l~~lT~dq~h 183 (207)
.....+++||+++++..+++++++||||||+|++|+|++.++|+||..
T Consensus 77 ~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~ 135 (237)
T 1txo_A 77 GNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTF 135 (237)
T ss_dssp HHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBH
T ss_pred HHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCH
Confidence 223355677777777777799999999999999999999999999763
No 2
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.88 E-value=2.8e-22 Score=174.73 Aligned_cols=121 Identities=13% Similarity=-0.021 Sum_probs=88.0
Q ss_pred EecCCCCCCCCCCceEEEecc------------------CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhccc-
Q 028548 61 LIPHPNKVERGGEDAFFVSCY------------------NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVE- 121 (207)
Q Consensus 61 ~~~~~g~~R~~nEDa~~~~~~------------------~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~- 121 (207)
..++.|+ |..|||++++..+ +..+|+||||||||..++++|..+++.+.+.+........
T Consensus 13 ~~s~~G~-R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~ 91 (316)
T 3kdj_B 13 FTSICGR-RPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSD 91 (316)
T ss_dssp EEEECTT-SSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred EEEeEeC-CCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 3445676 8999999998532 3579999999999999999999999988877643321100
Q ss_pred ---CcccHHHHHHHHHHc-------cCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEECCeEEEeCccee
Q 028548 122 ---VNYDPQILMRKAHAA-------TSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQE 182 (207)
Q Consensus 122 ---~~~~~~~~l~~A~~~-------~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR~g~l~~lT~dq~ 182 (207)
....+...|.+++.. ....++|||+++++..++++|++||||||+|++|+|++.++|+||.
T Consensus 92 ~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~ 162 (316)
T 3kdj_B 92 GDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHK 162 (316)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCC
Confidence 011234455555432 2234566666666666679999999999999999999999999965
No 3
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.87 E-value=5e-22 Score=166.33 Aligned_cols=123 Identities=18% Similarity=0.149 Sum_probs=87.9
Q ss_pred EEEecCCCCCCCCCCceEEEecc--CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHHHHc
Q 028548 59 THLIPHPNKVERGGEDAFFVSCY--NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKAHAA 136 (207)
Q Consensus 59 ~~~~~~~g~~R~~nEDa~~~~~~--~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A~~~ 136 (207)
....+++|++|+.|||++++... +..+|+|||||||+..++++|..+++.+.+.+.+... .....+.+.|.+++..
T Consensus 8 ~~~~s~~G~~r~~neD~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~--~~~~~~~~~l~~~~~~ 85 (250)
T 2pk0_A 8 ISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDF--SELSEIRDWMLVSIET 85 (250)
T ss_dssp EEEEEECCTTCSCCCEEEEEEECTTCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCC--CSHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCcCCCceEeccCCCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhccc--CChhhHHHHHHHHHHH
Confidence 34557899989999999987653 4579999999999999899999988887733322100 0011122222222211
Q ss_pred -----------cCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEECCeEEEeCcceee
Q 028548 137 -----------TSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEH 183 (207)
Q Consensus 137 -----------~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR~g~l~~lT~dq~h 183 (207)
....+++||+++++..+++++++|+||||+|++|+|++.++|+||..
T Consensus 86 ~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~ 143 (250)
T 2pk0_A 86 ENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSL 143 (250)
T ss_dssp HHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBH
T ss_pred HHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCH
Confidence 11456777777777777899999999999999999999999999654
No 4
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.87 E-value=2.1e-22 Score=177.36 Aligned_cols=123 Identities=19% Similarity=0.146 Sum_probs=89.1
Q ss_pred EEEEEecCCCCCCCCCCceEEEecc-----------------------CCeEEEEeeCCCCccccCccHHHHHHHHHHHH
Q 028548 57 VGTHLIPHPNKVERGGEDAFFVSCY-----------------------NGGVIAVADGVSGWAEQNVDPSLFSRELMANA 113 (207)
Q Consensus 57 ~~~~~~~~~g~~R~~nEDa~~~~~~-----------------------~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~ 113 (207)
+|.++. .|+ |..|||++++..+ +..+|+||||||||..+++++..+++.+.+.+
T Consensus 16 ~G~~s~--~G~-R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~ 92 (337)
T 3qn1_B 16 WGTVSI--QGN-RSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEI 92 (337)
T ss_dssp EEEEEE--CTT-SSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEe--eeC-CchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHH
Confidence 344444 665 8999999988542 24699999999999999999999999888776
Q ss_pred hhhhhc-------ccCcccHHHHHHHHHHcc-----------------------CCCCCcceEEEEEEeCCeEEEEEeCC
Q 028548 114 SYFVED-------VEVNYDPQILMRKAHAAT-----------------------SSVGSATVIVAMLERNGILKVASVGD 163 (207)
Q Consensus 114 ~~~~~~-------~~~~~~~~~~l~~A~~~~-----------------------~~~g~~Tt~va~l~~~~~l~vanVGD 163 (207)
...... ......+.+.|.+++... ...+|+||+++++..++++|++||||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGD 172 (337)
T 3qn1_B 93 ERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGD 172 (337)
T ss_dssp HHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESS
T ss_pred HhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccC
Confidence 543211 001123445555544321 12457777777777777999999999
Q ss_pred CCeEEEECCeEEEeCccee
Q 028548 164 CGLRIIRKGQITFSSSPQE 182 (207)
Q Consensus 164 SR~yllR~g~l~~lT~dq~ 182 (207)
||+|++|+|++.++|+||+
T Consensus 173 SR~~l~r~g~~~~lT~DH~ 191 (337)
T 3qn1_B 173 SRAVLFRGKEAMPLSVDHK 191 (337)
T ss_dssp CEEEEEETTEEEESCCCCC
T ss_pred cEEEEEeCCEeeeecCCCC
Confidence 9999999999999999964
No 5
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.87 E-value=5.5e-22 Score=164.95 Aligned_cols=122 Identities=23% Similarity=0.250 Sum_probs=84.7
Q ss_pred EEEecCCCCCCCCCCceEEEeccCCe-EEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHHHH--
Q 028548 59 THLIPHPNKVERGGEDAFFVSCYNGG-VIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKAHA-- 135 (207)
Q Consensus 59 ~~~~~~~g~~R~~nEDa~~~~~~~~~-l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A~~-- 135 (207)
+...+++|++|+.|||++ +...... +|+|||||||+..++++|..+++.+.+.+...... ....+.+.|.+++.
T Consensus 3 ~~~~s~~G~~r~~neD~~-~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~--~~~~~~~~l~~~~~~~ 79 (240)
T 2j82_A 3 VAGLTDCGLIRKSNQDAF-YIDEKHQRFFIVADGMGGHAGGEEASRLAVDHIRQYLETHLED--LQHDPVTLLRQAFLAA 79 (240)
T ss_dssp EEEEEECCSSCSSCCEEE-EECTTTCCEEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHH--HTTSHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCcCCCcc-EecCCCCeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccc--cchhHHHHHHHHHHHH
Confidence 345688999999999999 6553223 99999999999998899999888877654332210 01223333333321
Q ss_pred ----------ccCCCCCcceEEEEEEe--CCeEEEEEeCCCCeEEEECCeEEEeCcceee
Q 028548 136 ----------ATSSVGSATVIVAMLER--NGILKVASVGDCGLRIIRKGQITFSSSPQEH 183 (207)
Q Consensus 136 ----------~~~~~g~~Tt~va~l~~--~~~l~vanVGDSR~yllR~g~l~~lT~dq~h 183 (207)
.....+++||+++++.. +++++++|+||||+|++|+|++.++|+||..
T Consensus 80 ~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~ 139 (240)
T 2j82_A 80 NHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTW 139 (240)
T ss_dssp HHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBH
T ss_pred HHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcH
Confidence 11345566777776666 6799999999999999999999999999653
No 6
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=167.50 Aligned_cols=119 Identities=24% Similarity=0.154 Sum_probs=81.6
Q ss_pred EecCCCCCCCCCCceEEEec--cCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHHHHc--
Q 028548 61 LIPHPNKVERGGEDAFFVSC--YNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKAHAA-- 136 (207)
Q Consensus 61 ~~~~~g~~R~~nEDa~~~~~--~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A~~~-- 136 (207)
..+++|+ |+.|||++++.. .+..+|+|||||||+..+++++..+.+.+.+.+.. ..++.+.|.+++..
T Consensus 12 ~~s~~G~-R~~nED~~~~~~~~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~-------~~~~~~~l~~a~~~~~ 83 (274)
T 2iq1_A 12 CASQIGK-RKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-------EKNLETLLTLAFLEID 83 (274)
T ss_dssp EEEECCS-SSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-------CCCHHHHHHHHHHHHH
T ss_pred EEecccC-CCCccceEEEeeCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc-------cccHHHHHHHHHHHHH
Confidence 3567888 999999998864 24579999999999987777776666555443211 12334444333211
Q ss_pred ------------cCCCCCcceEEEEEEe-CCeEEEEEeCCCCeEEEECCeEEEeCcceeecCCCce
Q 028548 137 ------------TSSVGSATVIVAMLER-NGILKVASVGDCGLRIIRKGQITFSSSPQEHYFDCPY 189 (207)
Q Consensus 137 ------------~~~~g~~Tt~va~l~~-~~~l~vanVGDSR~yllR~g~l~~lT~dq~h~f~~p~ 189 (207)
....++|||+++++.. +.++|++||||||+|++|+|++.++|+| |.+..|.
T Consensus 84 ~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~D--H~~~~~~ 147 (274)
T 2iq1_A 84 KAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTID--HTPERKD 147 (274)
T ss_dssp HHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCC--CCTTSHH
T ss_pred HHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCC--CCCcCHH
Confidence 1233455666555554 4589999999999999999999999999 5554443
No 7
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.86 E-value=3.5e-22 Score=173.47 Aligned_cols=131 Identities=18% Similarity=0.086 Sum_probs=85.4
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEecc------CCeEEEEeeCCCCccccCccHHHHHHHHHHH--Hhhhhh----ccc
Q 028548 54 SFCVGTHLIPHPNKVERGGEDAFFVSCY------NGGVIAVADGVSGWAEQNVDPSLFSRELMAN--ASYFVE----DVE 121 (207)
Q Consensus 54 ~~~~~~~~~~~~g~~R~~nEDa~~~~~~------~~~l~aVADGvGG~~~g~~as~~~~~~l~~~--~~~~~~----~~~ 121 (207)
.+.+++ .++.|+ |+.|||++++... +..+|+|||||||+..+++++..+.+.+.+. +.+... ...
T Consensus 23 ~~~~~~--~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 99 (307)
T 2p8e_A 23 GLRYGL--SSMQGW-RVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALEL 99 (307)
T ss_dssp TEEEEE--EEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------
T ss_pred CeeEEE--EecCCC-CCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccc
Confidence 344444 456777 8999999987542 2469999999999988777777766665431 110000 000
Q ss_pred CcccHHHHHHHHHHc------------cCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEECCeEEEeCcceeecCCCce
Q 028548 122 VNYDPQILMRKAHAA------------TSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHYFDCPY 189 (207)
Q Consensus 122 ~~~~~~~~l~~A~~~------------~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR~g~l~~lT~dq~h~f~~p~ 189 (207)
....+.+.|.+++.. ....++|||+++++..++++|++||||||+|++|+|++.++|+| |.+..|.
T Consensus 100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~D--H~~~~~~ 177 (307)
T 2p8e_A 100 SVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQD--HKPCNPR 177 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCC--CCTTSHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCC--CCCCCHH
Confidence 011223445444321 11245677777777777799999999999999999999999999 6666553
No 8
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.86 E-value=1.4e-21 Score=175.42 Aligned_cols=115 Identities=23% Similarity=0.180 Sum_probs=82.5
Q ss_pred EEecCCCCCCCCCCceEEEecc--CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHHHH--
Q 028548 60 HLIPHPNKVERGGEDAFFVSCY--NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKAHA-- 135 (207)
Q Consensus 60 ~~~~~~g~~R~~nEDa~~~~~~--~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A~~-- 135 (207)
...+++|+ |+.|||++++... +..+|+|||||||+..++++|..+.+.+.+.+.. ..++.+.|.+++.
T Consensus 125 g~~s~~G~-R~~NED~~~~~~~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~-------~~~~~~~l~~a~~~~ 196 (389)
T 4da1_A 125 GCASQIGK-RKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-------EKNLETLLTLAFLEI 196 (389)
T ss_dssp EEEEECTT-SSSCCEEEEEEECSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-------CCCHHHHHHHHHHHH
T ss_pred EEecCCCC-CCCCcceeeeeecCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhcc-------ccCHHHHHHHHHHHH
Confidence 45678888 9999999988542 4579999999999999888888888776655421 1233343333322
Q ss_pred ----------ccC--CCCCcceEEE-EEEeCCeEEEEEeCCCCeEEEECCeEEEeCccee
Q 028548 136 ----------ATS--SVGSATVIVA-MLERNGILKVASVGDCGLRIIRKGQITFSSSPQE 182 (207)
Q Consensus 136 ----------~~~--~~g~~Tt~va-~l~~~~~l~vanVGDSR~yllR~g~l~~lT~dq~ 182 (207)
... ..+++||+++ ++..+.++|++||||||+|++|+|++.++|+||.
T Consensus 197 n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs 256 (389)
T 4da1_A 197 DKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHT 256 (389)
T ss_dssp HHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCC
T ss_pred HHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCC
Confidence 111 2335555554 4444448999999999999999999999999954
No 9
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.85 E-value=4.3e-21 Score=166.28 Aligned_cols=124 Identities=19% Similarity=0.085 Sum_probs=84.9
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEec---cCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHH
Q 028548 54 SFCVGTHLIPHPNKVERGGEDAFFVSC---YNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILM 130 (207)
Q Consensus 54 ~~~~~~~~~~~~g~~R~~nEDa~~~~~---~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l 130 (207)
++.++++ +++|. |..|||++++.. .+..+|+|||||||+..+++++..+.+.+.+... .. ..++.+.|
T Consensus 22 ~~~~~~~--s~~G~-R~~nED~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~--~~----~~~~~~~l 92 (304)
T 2i0o_A 22 FLASGSS--SMQGW-RISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEA--YG----RKEFEKAL 92 (304)
T ss_dssp SEEEEEE--EEEES-SSCCCEEEEEEEEEETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHH--HH----TTCHHHHH
T ss_pred ceEEEEe--ecCCC-CCCccCEEEEEeccCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhh--cc----cccHHHHH
Confidence 4555554 45675 899999998753 2457999999999998877777776665543211 01 11233333
Q ss_pred HHHHH--------------------------ccCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEECCeEEEeCcceeec
Q 028548 131 RKAHA--------------------------ATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHY 184 (207)
Q Consensus 131 ~~A~~--------------------------~~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR~g~l~~lT~dq~h~ 184 (207)
++++. .....++|||+++++..++++|++||||||+|++|+|++.++|+|| .
T Consensus 93 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH--~ 170 (304)
T 2i0o_A 93 KEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDH--K 170 (304)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCC--C
T ss_pred HHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCc--C
Confidence 33221 1113457777777777778999999999999999999999999994 4
Q ss_pred CCCc
Q 028548 185 FDCP 188 (207)
Q Consensus 185 f~~p 188 (207)
+..|
T Consensus 171 ~~~~ 174 (304)
T 2i0o_A 171 PEDT 174 (304)
T ss_dssp TTSH
T ss_pred CcCH
Confidence 4443
No 10
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.85 E-value=3e-21 Score=168.19 Aligned_cols=126 Identities=17% Similarity=0.180 Sum_probs=84.4
Q ss_pred EEEEecCCCCCCCCCCceEEEecc------CCeEEEEeeCCCCccccCccHHHHHHHHHHH--Hhhhhh---cccC----
Q 028548 58 GTHLIPHPNKVERGGEDAFFVSCY------NGGVIAVADGVSGWAEQNVDPSLFSRELMAN--ASYFVE---DVEV---- 122 (207)
Q Consensus 58 ~~~~~~~~g~~R~~nEDa~~~~~~------~~~l~aVADGvGG~~~g~~as~~~~~~l~~~--~~~~~~---~~~~---- 122 (207)
.+...+++|+ |+.|||++++..+ +..+|+|||||||+..|+++|..+++.+.+. +.+... ....
T Consensus 23 ~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 101 (324)
T 2i44_A 23 DAAIFTDIGG-RKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEV 101 (324)
T ss_dssp EEEEEEECTT-SSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHHHH
T ss_pred EEEEEECCCC-CCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCcccc
Confidence 3445677898 9999999988752 3469999999999999999999888877652 221100 0000
Q ss_pred ----cccHHHHHHHHHH------------c-cCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEEC---C-eEEEeCcce
Q 028548 123 ----NYDPQILMRKAHA------------A-TSSVGSATVIVAMLERNGILKVASVGDCGLRIIRK---G-QITFSSSPQ 181 (207)
Q Consensus 123 ----~~~~~~~l~~A~~------------~-~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR~---g-~l~~lT~dq 181 (207)
..++.+.|.+++. . ....|+|||+++ + .++++|++||||||+|++|+ | ++.++|+|
T Consensus 102 ~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~-i-~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~D- 178 (324)
T 2i44_A 102 DEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAV-L-AKGFVAVGHLGDSRIAMGVETPNGLNCEFLTVD- 178 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEE-E-ETTEEEEEEESSCEEEEEEEETTEEEEEESCCC-
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE-E-ECCeEEEEEccCceEEEEeccCCCceEEECCCC-
Confidence 0112333333322 1 223455555554 4 45689999999999999997 7 99999999
Q ss_pred eecCCCc
Q 028548 182 EHYFDCP 188 (207)
Q Consensus 182 ~h~f~~p 188 (207)
|.+..|
T Consensus 179 -H~~~~~ 184 (324)
T 2i44_A 179 -HKPDMP 184 (324)
T ss_dssp -CCTTSH
T ss_pred -CCCcCH
Confidence 555544
No 11
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.84 E-value=3.2e-21 Score=172.98 Aligned_cols=129 Identities=16% Similarity=0.047 Sum_probs=85.9
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEecc------CCeEEEEeeCCCCccccCccHHHHHHHHHHH--HhhhhhcccCccc
Q 028548 54 SFCVGTHLIPHPNKVERGGEDAFFVSCY------NGGVIAVADGVSGWAEQNVDPSLFSRELMAN--ASYFVEDVEVNYD 125 (207)
Q Consensus 54 ~~~~~~~~~~~~g~~R~~nEDa~~~~~~------~~~l~aVADGvGG~~~g~~as~~~~~~l~~~--~~~~~~~~~~~~~ 125 (207)
.+.+++ .+++|+ |..|||++++... +..+|+|||||||+..+++++..+++.+.+. +.+. ........
T Consensus 21 ~l~~g~--~s~~G~-R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~-~~~~~~~~ 96 (382)
T 1a6q_A 21 GLRYGL--SSMQGW-RVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGS-AGAPSVEN 96 (382)
T ss_dssp TEEEEE--EEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCS-SSSCCHHH
T ss_pred ceEEEE--EecCCC-CCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhcc-CCCCCHHH
Confidence 345554 455777 8999999987542 2369999999999988878777777766531 1110 00000111
Q ss_pred HHHHHHHHHH------------ccCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEECCeEEEeCcceeecCCCc
Q 028548 126 PQILMRKAHA------------ATSSVGSATVIVAMLERNGILKVASVGDCGLRIIRKGQITFSSSPQEHYFDCP 188 (207)
Q Consensus 126 ~~~~l~~A~~------------~~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR~g~l~~lT~dq~h~f~~p 188 (207)
+.+.|.+++. .....++|||+++++..++++|++||||||+|++|+|++.++|+| |.+..|
T Consensus 97 ~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~D--Hs~~~~ 169 (382)
T 1a6q_A 97 VKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQD--HKPSNP 169 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCC--CCTTSH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCC--CCCCCH
Confidence 2333333321 223445677777777767799999999999999999999999999 555554
No 12
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.84 E-value=4.5e-21 Score=159.04 Aligned_cols=118 Identities=19% Similarity=0.162 Sum_probs=81.9
Q ss_pred EEEEEecCCCCCCCCCCceEEEeccCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHHHHc
Q 028548 57 VGTHLIPHPNKVERGGEDAFFVSCYNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKAHAA 136 (207)
Q Consensus 57 ~~~~~~~~~g~~R~~nEDa~~~~~~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A~~~ 136 (207)
+.....+++|++|+.|||++++. ..+|+|||||||| |..+|.++++.+.+.+... . . .....+.+.++.+.
T Consensus 6 ~~~~~~s~~G~~r~~neD~~~~~---~~~~~V~DG~Gg~--G~~as~~~~~~l~~~~~~~--~-~-~~~l~~~~~~~~~~ 76 (234)
T 2jfr_A 6 LSAATATDQGPVRENNQDACLAD---GILYAVADGFGAR--GHHASATALKTLSAGFAAA--P-D-RDGLLEAVQQANLR 76 (234)
T ss_dssp EEEEEEEECCSSCSSCCEEEEEE---TTEEEEEEEESTT--HHHHHHHHHHHHHHHHHHS--C-S-HHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCcCCCcceeC---CcEEEEEeCCCcc--HHHHHHHHHHHHHHHHhcC--C-c-HHHHHHHHHHHHHH
Confidence 44556788999999999999773 4799999999999 6788888777776654321 0 0 11122223222211
Q ss_pred ----c--CCCCCcceEEEEEEeCCe---EEEEEeCCCCeEEEECCeEEEeCcceee
Q 028548 137 ----T--SSVGSATVIVAMLERNGI---LKVASVGDCGLRIIRKGQITFSSSPQEH 183 (207)
Q Consensus 137 ----~--~~~g~~Tt~va~l~~~~~---l~vanVGDSR~yllR~g~l~~lT~dq~h 183 (207)
. ....++||+++++..+++ ++++|+||||+|++|+|++.++|+||..
T Consensus 77 l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~ 132 (234)
T 2jfr_A 77 VFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSV 132 (234)
T ss_dssp HHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBH
T ss_pred HHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCH
Confidence 1 111155666666555667 9999999999999999999999999765
No 13
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.83 E-value=2e-20 Score=154.15 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=76.8
Q ss_pred CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhc-ccCcccHHHHHHHHHHccCCCCCcceEEEEEEe--CCeEEE
Q 028548 82 NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVED-VEVNYDPQILMRKAHAATSSVGSATVIVAMLER--NGILKV 158 (207)
Q Consensus 82 ~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~-~~~~~~~~~~l~~A~~~~~~~g~~Tt~va~l~~--~~~l~v 158 (207)
+..+|+||||||||..|++||.++++.+.+.+...... +.....+..+++.+.......+|+||+++++.. ++++++
T Consensus 9 ~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~~ 88 (211)
T 3rnr_A 9 DKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGSPLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEW 88 (211)
T ss_dssp TEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEEE
T ss_pred CccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEEE
Confidence 56799999999999999999999999988766432110 001111223333444445667788888888877 789999
Q ss_pred EEeCCCCeEEEECCeEEEeCcceee
Q 028548 159 ASVGDCGLRIIRKGQITFSSSPQEH 183 (207)
Q Consensus 159 anVGDSR~yllR~g~l~~lT~dq~h 183 (207)
+||||||+|++|+|++.++|+||..
T Consensus 89 anvGDSr~yl~r~g~~~~lt~dh~~ 113 (211)
T 3rnr_A 89 ASVGDCRVYLFKGGRLSRLSLDHNV 113 (211)
T ss_dssp EEESSCEEEEEETTEEEECCCCCBH
T ss_pred EEEccCeEEEEeCCEEEEECCCcHH
Confidence 9999999999999999999999753
No 14
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.82 E-value=6.7e-21 Score=171.71 Aligned_cols=130 Identities=18% Similarity=0.139 Sum_probs=82.3
Q ss_pred eEEEEEEEe-----cCCCCCCCCCCceEEEec--cCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccH
Q 028548 54 SFCVGTHLI-----PHPNKVERGGEDAFFVSC--YNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDP 126 (207)
Q Consensus 54 ~~~~~~~~~-----~~~g~~R~~nEDa~~~~~--~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~ 126 (207)
.+.+|++.. .++|+.|..|||++++.. .+..+|+|||||||+..+++++..+...|.+. .+.......++
T Consensus 26 ~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~---~~~~~~~~~~~ 102 (401)
T 2j4o_A 26 LSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLG---QLNAEHAEADV 102 (401)
T ss_dssp TEEEEEECCEEECSSSSCEECCCCCEEEEEEEETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSS---SCCTTSCHHHH
T ss_pred cCceeEEecccccccccccCCCCCCceEEEecCCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHh---hhhcccchhhH
Confidence 456666643 235556778999998763 24579999999999987777766655544321 00000001122
Q ss_pred HHHHHHHHHcc----------------------------------------------CCCCCcceEEEEEEeCCeEEEEE
Q 028548 127 QILMRKAHAAT----------------------------------------------SSVGSATVIVAMLERNGILKVAS 160 (207)
Q Consensus 127 ~~~l~~A~~~~----------------------------------------------~~~g~~Tt~va~l~~~~~l~van 160 (207)
.+.|.+++... ...+||||+++++..++++|++|
T Consensus 103 ~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~van 182 (401)
T 2j4o_A 103 RRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVAN 182 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEEEE
Confidence 22232222100 12246666666666677999999
Q ss_pred eCCCCeEEEECC----eEEEeCcceeecCCCc
Q 028548 161 VGDCGLRIIRKG----QITFSSSPQEHYFDCP 188 (207)
Q Consensus 161 VGDSR~yllR~g----~l~~lT~dq~h~f~~p 188 (207)
|||||+|++|++ ++++||+| |....|
T Consensus 183 vGDSRa~l~r~~~~g~~~~~LT~D--H~~~~~ 212 (401)
T 2j4o_A 183 VGTNRALLCKSTVDGLQVTQLNVD--HTTENE 212 (401)
T ss_dssp ESSCEEEEEEECSSSEEEEECSCC--CSTTSH
T ss_pred ccCceEEEEEcCCCCceEEECCCC--CCCCCH
Confidence 999999999998 99999999 555444
No 15
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.82 E-value=1.2e-20 Score=167.39 Aligned_cols=122 Identities=14% Similarity=0.176 Sum_probs=78.7
Q ss_pred ecCCCCCCC--CCCceEEEecc--CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHHHHc-
Q 028548 62 IPHPNKVER--GGEDAFFVSCY--NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKAHAA- 136 (207)
Q Consensus 62 ~~~~g~~R~--~nEDa~~~~~~--~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A~~~- 136 (207)
.+..|++|. .|||++++... +..+|+|||||||+..+++++..+.+.+.+. .+.......++.+.|.+++..
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~---~l~~~~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVTVAENALQEMAAELLLG---QLNVCNTDEAVKELIRQSFMSV 101 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEECSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSS---TTTTCCSHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEECCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHh---hhccccchhhHHHHHHHHHHHH
Confidence 445787553 69999987642 4579999999999977666665555444320 111000011222333322211
Q ss_pred ----------------------------------------------cCCCCCcceEEEEEEeCCeEEEEEeCCCCeEEEE
Q 028548 137 ----------------------------------------------TSSVGSATVIVAMLERNGILKVASVGDCGLRIIR 170 (207)
Q Consensus 137 ----------------------------------------------~~~~g~~Tt~va~l~~~~~l~vanVGDSR~yllR 170 (207)
....+||||+++++..++++|++||||||+|++|
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 0123467777777666779999999999999999
Q ss_pred C---C--eEEEeCcceeecCCCc
Q 028548 171 K---G--QITFSSSPQEHYFDCP 188 (207)
Q Consensus 171 ~---g--~l~~lT~dq~h~f~~p 188 (207)
+ | ++++||+| |.+..|
T Consensus 182 ~~~~g~~~~~~LT~D--H~~~~~ 202 (358)
T 2irm_A 182 TDEHDTLTVTQLSVD--HNLLNA 202 (358)
T ss_dssp CCTTCSCEEEECSCC--CBTTSH
T ss_pred ecCCCceeeEeCCCC--CCCCCH
Confidence 8 8 99999999 555555
No 16
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.79 E-value=1.7e-19 Score=165.71 Aligned_cols=120 Identities=17% Similarity=0.069 Sum_probs=83.6
Q ss_pred cCCCCCCCCCCceEEEec---cCCeEEEEeeCCCCccccCccHHHHHHHHHHHH------hhh---hhc-----------
Q 028548 63 PHPNKVERGGEDAFFVSC---YNGGVIAVADGVSGWAEQNVDPSLFSRELMANA------SYF---VED----------- 119 (207)
Q Consensus 63 ~~~g~~R~~nEDa~~~~~---~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~------~~~---~~~----------- 119 (207)
++.|..|+.|||++.+.. .+..+|||||||||+.++++++..+...|...+ .+. ...
T Consensus 43 s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~ 122 (467)
T 2pnq_A 43 SNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWH 122 (467)
T ss_dssp EEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEEC
T ss_pred eeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccccc
Confidence 456788999999997753 256799999999999999999988887776432 100 000
Q ss_pred ----------------------c----c------CcccHHHHHHHHHHcc----------------------CCCCCcce
Q 028548 120 ----------------------V----E------VNYDPQILMRKAHAAT----------------------SSVGSATV 145 (207)
Q Consensus 120 ----------------------~----~------~~~~~~~~l~~A~~~~----------------------~~~g~~Tt 145 (207)
+ . ...++.+.|.+++... ...+||||
T Consensus 123 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtT 202 (467)
T 2pnq_A 123 KHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGAT 202 (467)
T ss_dssp CCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEEC
T ss_pred ccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcce
Confidence 0 0 0013445555544321 12346677
Q ss_pred EEEEEEeCCeEEEEEeCCCCeEEEE---CC--eEEEeCccee
Q 028548 146 IVAMLERNGILKVASVGDCGLRIIR---KG--QITFSSSPQE 182 (207)
Q Consensus 146 ~va~l~~~~~l~vanVGDSR~yllR---~g--~l~~lT~dq~ 182 (207)
+++++..++++||+||||||+|++| +| ++.++|+||.
T Consensus 203 a~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~ 244 (467)
T 2pnq_A 203 ACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHN 244 (467)
T ss_dssp EEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCS
T ss_pred EEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCC
Confidence 7777767779999999999999999 47 8999999953
No 17
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.77 E-value=2.3e-18 Score=153.35 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=75.1
Q ss_pred EEEEecCCCCCCCCCCceEEEec-----cCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHH
Q 028548 58 GTHLIPHPNKVERGGEDAFFVSC-----YNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRK 132 (207)
Q Consensus 58 ~~~~~~~~g~~R~~nEDa~~~~~-----~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 132 (207)
.++..+++|+ |+.|||++++.. .+..+|+||||||| ..+|..+++.|.+.+.+.. ... .+.|++
T Consensus 14 ~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG----~~as~~a~~~l~~~l~~~~-----~~~-~~~l~~ 82 (364)
T 2isn_A 14 TTVAATMLGR-RPTDEDAILVSAPATSRPNVRIKAVFDGHAG----EATSQYCAKHAAKHLGKLS-----EFT-FAEVKK 82 (364)
T ss_dssp EEEEEEECTT-SSSCCEEEEEECC----CCEEEEEEEEEESC----SHHHHHHHHHHHHHHTTCS-----SCC-HHHHHH
T ss_pred EEEEEEcCCC-CCcCCCeeEEeccCCCCCCeEEEEEEECCCC----HHHHHHHHHHHHHHHHHhh-----ccc-HHHHHH
Confidence 3445677887 999999998863 24579999999996 4567777777766654321 111 122222
Q ss_pred HHHc---------cCCCCCcceEEEEEEe---------------------------------------------------
Q 028548 133 AHAA---------TSSVGSATVIVAMLER--------------------------------------------------- 152 (207)
Q Consensus 133 A~~~---------~~~~g~~Tt~va~l~~--------------------------------------------------- 152 (207)
++.. .....++||+++++..
T Consensus 83 a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (364)
T 2isn_A 83 ACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPD 162 (364)
T ss_dssp HHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCC
T ss_pred HHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccccccccc
Confidence 2211 1123455555544432
Q ss_pred --------C-CeEEEEEeCCCCeEEE-ECCeEEEeCccee
Q 028548 153 --------N-GILKVASVGDCGLRII-RKGQITFSSSPQE 182 (207)
Q Consensus 153 --------~-~~l~vanVGDSR~yll-R~g~l~~lT~dq~ 182 (207)
+ .++|++||||||+|++ |+|++.++|+||.
T Consensus 163 ~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~ 202 (364)
T 2isn_A 163 VQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHK 202 (364)
T ss_dssp CEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCC
T ss_pred ccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCC
Confidence 1 2799999999999999 7999999999953
No 18
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.71 E-value=6.1e-18 Score=151.42 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=70.9
Q ss_pred EecCCCCCCCCC-----CceEEEec-----cCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHH
Q 028548 61 LIPHPNKVERGG-----EDAFFVSC-----YNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILM 130 (207)
Q Consensus 61 ~~~~~g~~R~~n-----EDa~~~~~-----~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l 130 (207)
..+++|+ |+.| ||++++.. .+..+|+|||||||+..+++++..+.+.+ .+.. ..+.+.|
T Consensus 17 ~~s~~G~-R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l----~~~~------~~~~~al 85 (377)
T 3d8k_A 17 SATSRNR-RPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYL----NDLR------DVNEEEI 85 (377)
T ss_dssp HTTTCEE-EEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHH----TTCS------SSSHHHH
T ss_pred EEEccCC-CCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHH----HHhc------ccHHHHH
Confidence 3567887 6655 66666642 13469999999999876555555544433 2211 1123444
Q ss_pred HHHHHc-------cCCCCCcceEEEEEEe--------------------------------------------------C
Q 028548 131 RKAHAA-------TSSVGSATVIVAMLER--------------------------------------------------N 153 (207)
Q Consensus 131 ~~A~~~-------~~~~g~~Tt~va~l~~--------------------------------------------------~ 153 (207)
++++.. ....+++|++++++.. +
T Consensus 86 ~~af~~~d~~l~~~~~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~ 165 (377)
T 3d8k_A 86 TRQFERMDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGI 165 (377)
T ss_dssp HHHHHHHHHHHHHHTCCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCE
T ss_pred HHHHHHHHHHHHhcccCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecccccccccCC
Confidence 444332 2223455555555531 1
Q ss_pred CeEEEEEeCCCCeEEEECCeEEEeCccee
Q 028548 154 GILKVASVGDCGLRIIRKGQITFSSSPQE 182 (207)
Q Consensus 154 ~~l~vanVGDSR~yllR~g~l~~lT~dq~ 182 (207)
+++|++||||||+|++|+|++.++|+||.
T Consensus 166 ~~l~vanvGDSRa~l~r~g~~~~LT~DH~ 194 (377)
T 3d8k_A 166 YTIHVASLGNSRCVLKSGRTAIHLSTPHT 194 (377)
T ss_dssp EEEEEEEESSCEEEEEETTEEEESSCCCS
T ss_pred CeEEEEEcccceEEEEECCEEEECCcCCC
Confidence 37999999999999999999999999954
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.41 E-value=3.6e-12 Score=105.99 Aligned_cols=122 Identities=13% Similarity=0.130 Sum_probs=80.9
Q ss_pred CCceeEEEEEEEecCCCCCCCCCCceEEEecc-C-CeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHH
Q 028548 50 RPELSFCVGTHLIPHPNKVERGGEDAFFVSCY-N-GGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQ 127 (207)
Q Consensus 50 ~~~~~~~~~~~~~~~~g~~R~~nEDa~~~~~~-~-~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 127 (207)
...+.+.++.++++.|+ +.-|.|.+.+... + ..+++||||||++..+..++..+...+..... . ..++.
T Consensus 3 ~~~~~i~~~~~~~~~p~--~~v~GD~y~~~~~~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~----~---~~~~~ 73 (242)
T 3t91_A 3 AMSYRVSTGAAHAAKGG--GLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIKLLEKILE----S---GIDEK 73 (242)
T ss_dssp CCCCEEEEEEEEECTTS--CSCCSCEEEEEEETTTEEEEEEECC-----CCSEEECHHHHHHHHHHH----H---TCCHH
T ss_pred cceEEEEEEeehhcCCc--cccCCcEEEEEEeCCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHH----h---CCCHH
Confidence 35688999999999998 5789999877542 3 34699999999988888887776665543321 1 23566
Q ss_pred HHHHHHHH---ccCCCCC-cceEEEEEE-eCCeEEEEEeCCCCeEEEECCeEEEeCcc
Q 028548 128 ILMRKAHA---ATSSVGS-ATVIVAMLE-RNGILKVASVGDCGLRIIRKGQITFSSSP 180 (207)
Q Consensus 128 ~~l~~A~~---~~~~~g~-~Tt~va~l~-~~~~l~vanVGDSR~yllR~g~l~~lT~d 180 (207)
++++.... .....++ +|++++++. .+++++++|+||||+|++|+|++.+++.+
T Consensus 74 ~~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~ 131 (242)
T 3t91_A 74 IAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQAS 131 (242)
T ss_dssp HHHHHHHHHHTTC----CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCC
Confidence 76655443 2222344 444444454 35689999999999999999999988764
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.20 E-value=5.9e-10 Score=93.18 Aligned_cols=122 Identities=12% Similarity=0.076 Sum_probs=80.8
Q ss_pred CceeEEEEEEEecCCCCCCCCCCceEEEecc-CC-eEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHH
Q 028548 51 PELSFCVGTHLIPHPNKVERGGEDAFFVSCY-NG-GVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQI 128 (207)
Q Consensus 51 ~~~~~~~~~~~~~~~g~~R~~nEDa~~~~~~-~~-~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~ 128 (207)
..+.+.++.+..+.|+ +.-+.|.|.+... ++ .+++||||+|++..+.+++..+...+... ... ..++.+
T Consensus 7 m~~~~~~~~~~~~~~~--~~vgGD~y~~~~~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~----~~~---~~~~~~ 77 (242)
T 3pu9_A 7 MPVTIELAVAKTHKFG--TRESGDTVELVERPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRL----LNE---GVRDGA 77 (242)
T ss_dssp CCEEEEEEEEEECCTT--CSSCSEEEEEEECTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHH----HHT---TCCHHH
T ss_pred CCcEEEEEEEecccCc--cccCCceEEEEEeCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHH----HHc---CCCHHH
Confidence 4667888888888877 5779999877542 33 45899999997665555555444433322 221 235666
Q ss_pred HHHHHHH---ccCCCCCcceEEEE-EE-eCCeEEEEEeCCCCeEEEECCeEEEeCcce
Q 028548 129 LMRKAHA---ATSSVGSATVIVAM-LE-RNGILKVASVGDCGLRIIRKGQITFSSSPQ 181 (207)
Q Consensus 129 ~l~~A~~---~~~~~g~~Tt~va~-l~-~~~~l~vanVGDSR~yllR~g~l~~lT~dq 181 (207)
+++.... .....++.+|++++ +. .+++++++|+||+++|++|+|++.+++.+.
T Consensus 78 ~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~ 135 (242)
T 3pu9_A 78 AARAAHDFLYAMRDGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESG 135 (242)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCC
T ss_pred HHHHHHHHHHhccCCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCC
Confidence 6654432 12223344555444 44 356899999999999999999999998863
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=98.81 E-value=4.3e-08 Score=79.20 Aligned_cols=113 Identities=19% Similarity=0.203 Sum_probs=77.4
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEecc-CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHH
Q 028548 55 FCVGTHLIPHPNKVERGGEDAFFVSCY-NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKA 133 (207)
Q Consensus 55 ~~~~~~~~~~~g~~R~~nEDa~~~~~~-~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A 133 (207)
+.+++++.|.|+ +.-+.|.|.+... +..+++|+||+|. ++.|++++..+...+.+. ...+|.++++..
T Consensus 4 ~~~~~~~~p~~~--~~v~GD~y~~~~~~~~~~~~v~Dv~Gh----G~~Aa~~s~~~~~~l~~~-----~~~~p~~il~~l 72 (193)
T 3zt9_A 4 LEVGIYTRAREG--EIACGDACLVKRVEGVIFLAVGDGIGH----GPEAARAAEIAIASMESS-----MNTGLVNIFQLC 72 (193)
T ss_dssp CCEEEEEECCTT--CSSCSEEEEEEEETTEEEEEEEEESSS----HHHHHHHHHHHHHHHHHH-----TTSCHHHHHHHH
T ss_pred cEEEEEEeccCC--CCCCCCeEEEEEeCCEEEEEEEeCCCC----CHHHHHHHHHHHHHHHHc-----ccCCHHHHHHHH
Confidence 567888888887 4778999977643 4568899999994 445555555444443321 235678887766
Q ss_pred HHccCCCCCcceEEEEEEe-CCeEEEEEeCCCCeEEEECCeEEEeC
Q 028548 134 HAATSSVGSATVIVAMLER-NGILKVASVGDCGLRIIRKGQITFSS 178 (207)
Q Consensus 134 ~~~~~~~g~~Tt~va~l~~-~~~l~vanVGDSR~yllR~g~l~~lT 178 (207)
........+.|++++.+.. .+++.++|+|+++.|++|+|++.++.
T Consensus 73 n~~l~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~ 118 (193)
T 3zt9_A 73 HRELRGTRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPL 118 (193)
T ss_dssp HHHHTTSSCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCC
T ss_pred HHHHhccCceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEec
Confidence 5543323345666666653 56899999999999999999876554
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.66 E-value=5.3e-07 Score=75.14 Aligned_cols=121 Identities=12% Similarity=0.068 Sum_probs=68.2
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEec--cCCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhc--ccCcccHHHHH
Q 028548 55 FCVGTHLIPHPNKVERGGEDAFFVSC--YNGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVED--VEVNYDPQILM 130 (207)
Q Consensus 55 ~~~~~~~~~~~g~~R~~nEDa~~~~~--~~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~--~~~~~~~~~~l 130 (207)
+.+.+.+.|. +.-+-|.+-+.. .+..+++|+||+|+...+...+..+ +.+++.+.+.... .....+|.+++
T Consensus 38 ~~~~~~~~p~----~~vgGD~yd~~~~~~~~~~~~vaD~~GhG~~aa~~s~~~-~~~~~~~~~~~~~~~~~~~~~p~~~l 112 (255)
T 3f79_A 38 LEFSHRIIPS----LYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLL-KFMTTRLLYESRRNGTLPEFKPSEVL 112 (255)
T ss_dssp EEEEEEEECS----SSSCSEEEEEEEETTTEEEEEEEEESSCSHHHHHHHHHH-HHHHHHHHHHHTTCCC----CHHHHH
T ss_pred EEEEEEEeEh----hhcCceEEeEEEeCCCEEEEEEEEecCCCHHHHHHHHHH-HHHHHHHHHhhccccccccCCHHHHH
Confidence 4555555543 466889874432 2346789999999543333333222 2222222111110 11234677777
Q ss_pred HHHHHc--cCCCCCcceEEEEEE--eCCeEEEEEeCC-CCeEEEECCeEEEeCcc
Q 028548 131 RKAHAA--TSSVGSATVIVAMLE--RNGILKVASVGD-CGLRIIRKGQITFSSSP 180 (207)
Q Consensus 131 ~~A~~~--~~~~g~~Tt~va~l~--~~~~l~vanVGD-SR~yllR~g~l~~lT~d 180 (207)
...... ....++.+|+++++. .+++++++|+|| ++.|++|+|++.+++.+
T Consensus 113 ~~ln~~l~~~~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~ 167 (255)
T 3f79_A 113 AHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGR 167 (255)
T ss_dssp HHHHHHHBTTBSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC-
T ss_pred HHHHHHHHhcCCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCC
Confidence 665442 223456666666655 356899999999 57999999999988865
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=97.57 E-value=0.0023 Score=56.88 Aligned_cols=118 Identities=14% Similarity=0.185 Sum_probs=71.1
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEecc-CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhcccCcccHHHHHHHH
Q 028548 55 FCVGTHLIPHPNKVERGGEDAFFVSCY-NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVEDVEVNYDPQILMRKA 133 (207)
Q Consensus 55 ~~~~~~~~~~~g~~R~~nEDa~~~~~~-~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~A 133 (207)
+.+.+.+.|.... ..-+-|.|.+... +..+++|+|++|- |+.|+.++..+...+..... ...+|.+++...
T Consensus 36 ~~~~~~y~P~~~~-~~vgGD~y~~~~~~~~~~~~v~Dv~Gh----Gv~AA~~~~~~~~~l~~~~~---~~~~p~~il~~l 107 (399)
T 3ke6_A 36 ADIAAEYLVAAED-TAAGGDWFDALALGDRLVLVVGDVVGH----GVEAAAVMSQLRTALRMQIS---AGYTVVEALEAV 107 (399)
T ss_dssp EEEEEEEECSSSS-CSCCSEEEEEEECSSEEEEEEEECSSC----SHHHHHHHHHHHHHHHHHHH---TTCCHHHHHHHH
T ss_pred eEEEEEEEECCCC-CCCCCceEEEEEECCEEEEEEEEecCC----CHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHH
Confidence 4566666654311 2456898866543 4567899999883 45555444443333332222 134677766544
Q ss_pred HH---ccCCCCCcceEEEEEE-eCCeEEEEEeCCCCeEEEE-CCeEEEeCcc
Q 028548 134 HA---ATSSVGSATVIVAMLE-RNGILKVASVGDCGLRIIR-KGQITFSSSP 180 (207)
Q Consensus 134 ~~---~~~~~g~~Tt~va~l~-~~~~l~vanVGDSR~yllR-~g~l~~lT~d 180 (207)
.. ........|++++.+. ..+++.++|.|..+.|++| +|++..+..+
T Consensus 108 n~~~~~~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~ 159 (399)
T 3ke6_A 108 DRFHKQVPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPT 159 (399)
T ss_dssp HHHGGGSTTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCC
T ss_pred HHHHHhcCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecC
Confidence 32 2222233555566665 3568999999999999999 7777777654
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=93.72 E-value=1.7 Score=37.52 Aligned_cols=116 Identities=11% Similarity=0.072 Sum_probs=62.2
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEec-c-CCeEEEEeeCCCCccccCccHHHHHHHHHHHHhhhhhc-----ccCcccHH
Q 028548 55 FCVGTHLIPHPNKVERGGEDAFFVSC-Y-NGGVIAVADGVSGWAEQNVDPSLFSRELMANASYFVED-----VEVNYDPQ 127 (207)
Q Consensus 55 ~~~~~~~~~~~g~~R~~nEDa~~~~~-~-~~~l~aVADGvGG~~~g~~as~~~~~~l~~~~~~~~~~-----~~~~~~~~ 127 (207)
+.+.+.+.| . ..-+-|.|.+.. . +...++|+|++| . |+.|++.+..+...+...+.. .....+|.
T Consensus 177 ~~~~~~~~p--~--~~vgGD~yd~~~~~~~~~~~~i~Dv~G---h-Gv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 248 (394)
T 3eq2_A 177 LEFSHRIIP--S--LYLSGDFVDYFRVDERRVAFYLADVSG---H-GASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPS 248 (394)
T ss_dssp EEEEEEEC---------CCCEEECCEETTTEEEEEEEEESS---C-STTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHH
T ss_pred eEEEEEecc--c--hhcCccEEeEEEeCCCcEEEEEEECCC---C-ChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHH
Confidence 344444443 2 355778874433 2 346789999887 2 444444433322222222111 01234677
Q ss_pred HHHHHHH---HccCCCCCcceEEEEEE-eCCeEEEEEeCC-CCeEEEECCeEEEeC
Q 028548 128 ILMRKAH---AATSSVGSATVIVAMLE-RNGILKVASVGD-CGLRIIRKGQITFSS 178 (207)
Q Consensus 128 ~~l~~A~---~~~~~~g~~Tt~va~l~-~~~~l~vanVGD-SR~yllR~g~l~~lT 178 (207)
+++.... .........|.+.+.+. ..+++.++|.|= .-.|+.++|++..+.
T Consensus 249 ~~l~~ln~~l~~~~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~ 304 (394)
T 3eq2_A 249 EVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLE 304 (394)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECC
T ss_pred HHHHHHHHHHhccCcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecC
Confidence 7765433 33332233566666665 356899999997 457888899887765
No 25
>2oq8_A ORF157, hypothetical protein; archaea, DNA binding, DNA binding protein; 1.80A {Acidianus filamentous virus 1} PDB: 3ii2_A 3ii3_A 3ile_A 3ild_A 3vb8_A
Probab=26.39 E-value=9.4 Score=28.65 Aligned_cols=27 Identities=26% Similarity=0.555 Sum_probs=17.5
Q ss_pred EEEECCeEEEeC-----------cceeecCCCceeccc
Q 028548 167 RIIRKGQITFSS-----------SPQEHYFDCPYQLSS 193 (207)
Q Consensus 167 yllR~g~l~~lT-----------~dq~h~f~~p~Ql~~ 193 (207)
|+-.+|++...| .|-...|||||||..
T Consensus 80 ~i~~~g~iee~~vysie~~~~~f~~i~~~~~~py~l~~ 117 (160)
T 2oq8_A 80 HVDKDGKIEERTVYSIETYWHIFIDIENDLNCPYVLAK 117 (160)
T ss_dssp EECTTSCEEEEEEEEEEEEHHHHHGGGGCSSSCHHHHH
T ss_pred EECCCCceeeeEEEEEEeeHHHHHHHHHhcCCcHHHHH
Confidence 455577765443 234456999999964
No 26
>3ii2_A ORF157, putative uncharacterized protein; archaea, nuclease, DNA binding protein; 2.00A {Acidianus filamentous virus 1} PDB: 3ii3_A 3ild_A 3ile_A 3vb8_A
Probab=24.65 E-value=9.4 Score=28.57 Aligned_cols=27 Identities=26% Similarity=0.555 Sum_probs=17.1
Q ss_pred EEEECCeEEEeC-----------cceeecCCCceeccc
Q 028548 167 RIIRKGQITFSS-----------SPQEHYFDCPYQLSS 193 (207)
Q Consensus 167 yllR~g~l~~lT-----------~dq~h~f~~p~Ql~~ 193 (207)
|+-.+|++...| .|-...|||||||..
T Consensus 77 ~i~~~g~iee~~vysie~~~~~f~~i~~~~~~py~l~~ 114 (157)
T 3ii2_A 77 HVDKDGKIEERTVYSIETYWHIFIDIENDLNCPYVLAK 114 (157)
T ss_dssp EECTTSCEEEEEEEEEEEEHHHHHHGGGCSSSCHHHHH
T ss_pred EECCCCceeeeEEEEEEeeHHHHHHHHHhcCCcHHHHH
Confidence 455577765443 233456999999864
Done!