Your job contains 1 sequence.
>028550
MDSIVLPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALR
RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP
VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG
DLMTPAPVVVRETTNLEDAARSSHSFF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028550
(207 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2114970 - symbol:LEJ2 "AT4G36910" species:3702... 616 3.9e-60 1
TAIR|locus:2124276 - symbol:LEJ1 "AT4G34120" species:3702... 510 6.7e-49 1
UNIPROTKB|Q3AFN9 - symbol:acuB "Acetoin utilization prote... 106 0.00017 2
TIGR_CMR|CHY_0173 - symbol:CHY_0173 "acetoin utilization ... 106 0.00017 2
ZFIN|ZDB-GENE-060421-6938 - symbol:zgc:136850 "zgc:136850... 111 0.00041 1
TIGR_CMR|CJE_1201 - symbol:CJE_1201 "inosine-5'-monophosp... 112 0.00055 1
>TAIR|locus:2114970 [details] [associations]
symbol:LEJ2 "AT4G36910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0045454 "cell redox
homeostasis" evidence=IDA] InterPro:IPR000644 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:COG0517 GO:GO:0045454 EMBL:Z99707
EMBL:AL161590 EMBL:AY085164 EMBL:BT003835 EMBL:BT005190
IPI:IPI00526612 PIR:H85435 RefSeq:NP_195409.1 UniGene:At.31287
UniGene:At.65827 PDB:4GQV PDB:4GQW PDBsum:4GQV PDBsum:4GQW
ProteinModelPortal:O23193 SMR:O23193 IntAct:O23193 PaxDb:O23193
PRIDE:O23193 EnsemblPlants:AT4G36910.1 GeneID:829844
KEGG:ath:AT4G36910 TAIR:At4g36910 HOGENOM:HOG000187907
InParanoid:O23193 OMA:GRTENSM PhylomeDB:O23193
ProtClustDB:CLSN2685590 Genevestigator:O23193 Uniprot:O23193
Length = 236
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 132/201 (65%), Positives = 152/201 (75%)
Query: 1 MDSIVLPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALR 60
MD+++ +S LRA +S +S L LP L +P C F+ + +
Sbjct: 1 MDAVLYSVPLSFTPLRA-----SSSPSSPYLLLPRFLSVQP-CHKFTFSRSFPSKSRIPS 54
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
SSA A TL NS++P SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFP
Sbjct: 55 ASSA--AGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFP 112
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VG
Sbjct: 113 VIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVG 172
Query: 181 DLMTPAPVVVRETTNLEDAAR 201
DLMTPAP+VV E TNLEDAA+
Sbjct: 173 DLMTPAPLVVEEKTNLEDAAK 193
>TAIR|locus:2124276 [details] [associations]
symbol:LEJ1 "AT4G34120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0045454 "cell redox homeostasis" evidence=IDA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0517 GO:GO:0045454 EMBL:AL021961 EMBL:AL161584
HOGENOM:HOG000187907 ProtClustDB:CLSN2685590 EMBL:AF360331
EMBL:AY056339 IPI:IPI00529341 PIR:T05424 RefSeq:NP_567952.1
UniGene:At.27243 UniGene:At.49487 UniGene:At.68482 PDB:3SL7
PDBsum:3SL7 ProteinModelPortal:Q9C5D0 SMR:Q9C5D0 IntAct:Q9C5D0
STRING:Q9C5D0 PaxDb:Q9C5D0 PRIDE:Q9C5D0 ProMEX:Q9C5D0
EnsemblPlants:AT4G34120.1 GeneID:829558 KEGG:ath:AT4G34120
TAIR:At4g34120 InParanoid:Q9C5D0 OMA:KRETENS PhylomeDB:Q9C5D0
Genevestigator:Q9C5D0 Uniprot:Q9C5D0
Length = 238
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 102/162 (62%), Positives = 133/162 (82%)
Query: 46 FSVLATSSDRVSALRRSS----AVFAS-GTLTANSAAPS-SGVYTVGDFMTTKEELHVVK 99
FS+L S+ R S+ S A FA+ ++ N++ P+ +G YTVGDFMT ++ LHVVK
Sbjct: 34 FSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVK 93
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P+T+VD+ALE+LVEK++TG PVIDD+W LVG+VSDYDLLALDSISG + D ++FP+VDS
Sbjct: 94 PSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 153
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
TWKTFNE+QKL+SKT GK+VGDLMTP+P+VVR++TNLEDAAR
Sbjct: 154 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAAR 195
>UNIPROTKB|Q3AFN9 [details] [associations]
symbol:acuB "Acetoin utilization protein AcuB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR000644 InterPro:IPR002912 Pfam:PF00571 Pfam:PF01842
PROSITE:PS51371 SMART:SM00116 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0006091
GO:GO:0016597 GO:GO:0045150 RefSeq:YP_359045.1
ProteinModelPortal:Q3AFN9 STRING:Q3AFN9 GeneID:3726273
KEGG:chy:CHY_0173 PATRIC:21273531 HOGENOM:HOG000187908 KO:K04767
OMA:VQTMNPI BioCyc:CHYD246194:GJCN-174-MONOMER Uniprot:Q3AFN9
Length = 210
Score = 106 (42.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/53 (54%), Positives = 33/53 (62%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V D MT EL VK T T+ EA+ EKRI PV+DD KLVG+VSD DL
Sbjct: 3 VKDIMT--RELITVKSTDTIREAMAKGHEKRIRHLPVVDDG-KLVGIVSDRDL 52
Score = 35 (17.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 179 VGDLMTPAPVVVRETTNLEDAAR 201
VGD+M V +E+AA+
Sbjct: 73 VGDIMQKRVVTAHPLDPVEEAAK 95
>TIGR_CMR|CHY_0173 [details] [associations]
symbol:CHY_0173 "acetoin utilization protein AcuB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR000644 InterPro:IPR002912 Pfam:PF00571 Pfam:PF01842
PROSITE:PS51371 SMART:SM00116 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0006091
GO:GO:0016597 GO:GO:0045150 RefSeq:YP_359045.1
ProteinModelPortal:Q3AFN9 STRING:Q3AFN9 GeneID:3726273
KEGG:chy:CHY_0173 PATRIC:21273531 HOGENOM:HOG000187908 KO:K04767
OMA:VQTMNPI BioCyc:CHYD246194:GJCN-174-MONOMER Uniprot:Q3AFN9
Length = 210
Score = 106 (42.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/53 (54%), Positives = 33/53 (62%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V D MT EL VK T T+ EA+ EKRI PV+DD KLVG+VSD DL
Sbjct: 3 VKDIMT--RELITVKSTDTIREAMAKGHEKRIRHLPVVDDG-KLVGIVSDRDL 52
Score = 35 (17.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 179 VGDLMTPAPVVVRETTNLEDAAR 201
VGD+M V +E+AA+
Sbjct: 73 VGDIMQKRVVTAHPLDPVEEAAK 95
>ZFIN|ZDB-GENE-060421-6938 [details] [associations]
symbol:zgc:136850 "zgc:136850" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000644 Pfam:PF00571
PROSITE:PS51371 SMART:SM00116 ZFIN:ZDB-GENE-060421-6938
GeneTree:ENSGT00390000009849 EMBL:AL929266 IPI:IPI00482602
Ensembl:ENSDART00000135209 Bgee:F1QK10 Uniprot:F1QK10
Length = 342
Score = 111 (44.1 bits), Expect = 0.00041, P = 0.00041
Identities = 31/111 (27%), Positives = 51/111 (45%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
T + + VK T TV +AL I VE+R++ PV+++ K+V L S +D++ L + +
Sbjct: 208 TFKSIATVKETETVYDALTIFVERRVSALPVVNEQGKVVALYSRFDVINLAAQKTYNHLN 267
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+M + W V K + V D + A V + ED R
Sbjct: 268 MTMAEAIQGRWCCIEGVLKCYPHETLETVIDRIAEAEVHRLVLVDTEDVVR 318
>TIGR_CMR|CJE_1201 [details] [associations]
symbol:CJE_1201 "inosine-5'-monophosphate dehydrogenase"
species:195099 "Campylobacter jejuni RM1221" [GO:0003938 "IMP
dehydrogenase activity" evidence=ISS] [GO:0009152 "purine
ribonucleotide biosynthetic process" evidence=ISS]
UniPathway:UPA00601 HAMAP:MF_01964 InterPro:IPR000644
InterPro:IPR001093 InterPro:IPR005990 InterPro:IPR013785
InterPro:IPR015875 Pfam:PF00478 Pfam:PF00571 PIRSF:PIRSF000130
PROSITE:PS00487 PROSITE:PS51371 SMART:SM00116 Gene3D:3.20.20.70
GO:GO:0000166 GO:GO:0046872 eggNOG:COG0517 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006177 KO:K00088 GO:GO:0003938
PANTHER:PTHR11911:SF6 TIGRFAMs:TIGR01302 OMA:SAGLKES
HOGENOM:HOG000165755 ProtClustDB:PRK05567 RefSeq:YP_179191.1
ProteinModelPortal:Q5HU44 SMR:Q5HU44 STRING:Q5HU44 GeneID:3231710
KEGG:cjr:CJE1201 PATRIC:20044198
BioCyc:CJEJ195099:GJC0-1228-MONOMER Uniprot:Q5HU44
Length = 485
Score = 112 (44.5 bits), Expect = 0.00055, P = 0.00055
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM--FP 155
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL +S S +N M P
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL-RFES-DFSNLVENVMTKMP 156
Query: 156 EVDSTWK-TFNEVQKLLSKTN 175
+ + T ++ +K+ S TN
Sbjct: 157 LITAPKGCTLDDAEKIFS-TN 176
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 207 207 0.00099 111 3 11 22 0.37 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 598 (64 KB)
Total size of DFA: 149 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.09u 0.08s 18.17t Elapsed: 00:00:01
Total cpu time: 18.10u 0.08s 18.18t Elapsed: 00:00:01
Start: Sat May 11 01:19:13 2013 End: Sat May 11 01:19:14 2013