BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028553
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 194 bits (493), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 146/236 (61%), Gaps = 46/236 (19%)
Query: 1 MALSSSSSSLCLHSATVLS-GSQFSTPQLLFPPRVSFSYFPTKLNNNYQNNRNLSSSEYY 59
MAL S CL + ++S + F+ L F+ PTKL + + +R
Sbjct: 1 MALPS-----CLKTGALMSPATGFNFSGSLMKSDSGFAV-PTKLQSTRKGDRE------- 47
Query: 60 HSSASQKWRASVSFFPAFLNKGKDA---KVLKEELLEAIAPLDRGAEATPEDQQRVEQIA 116
+ +A SF PAFL + A K LK+ELLEAI PL+RGA A+P+DQ R++Q+A
Sbjct: 48 ----RLRVQAIFSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLA 103
Query: 117 RKLEGVNPTKEPLKSDLLNGKWELIYTTSQSILQTQRPRFLRSVRNYQAINVDTLRAQNM 176
RK+E VNPTKEPLKSDL+NGKWELIYTTS SILQ ++PRFLRS+ NYQ+INVDTL+ QNM
Sbjct: 104 RKVEAVNPTKEPLKSDLVNGKWELIYTTSASILQAKKPRFLRSITNYQSINVDTLKVQNM 163
Query: 177 ESGPFFNQ-------------------------IPVKAPNTARGELETTYLDEDLR 207
E+ PF+N IP+KAP++ARGELE TY+DE+LR
Sbjct: 164 ETWPFYNSVTGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELR 219
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 112/164 (68%), Gaps = 26/164 (15%)
Query: 70 SVSFFPAFLNKGKDAKVLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPL 129
+V FP + K LK EL+EAI PL+RGA A+P+DQ ++Q+ARK+E VNPTKEPL
Sbjct: 48 AVFSFPPRNGGAEKRKQLKHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPL 107
Query: 130 KSDLLNGKWELIYTTSQSILQTQRPRFLRSVRNYQAINVDTLRAQNMESGPFFNQ----- 184
KSDL+NGKWELIYTTS +ILQ ++PRFLRS+ NYQ IN+DTL+ Q ME+ PF+N
Sbjct: 108 KSDLINGKWELIYTTSAAILQAKKPRFLRSLTNYQCINMDTLKVQRMETWPFYNSVTGDL 167
Query: 185 --------------------IPVKAPN-TARGELETTYLDEDLR 207
IPVKAP+ TARGELE TY+DE+LR
Sbjct: 168 TPLNSKTVAVKLQVFKILGFIPVKAPDGTARGELEITYVDEELR 211
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 8/115 (6%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQ-RVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
+KEEL EA+ ++RG D++ +E + + LE NPT EP D + G W+LIY+T
Sbjct: 86 IKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLIYST 145
Query: 145 SQSILQTQRPRFLRSVRNYQAINVDTLRAQNMESGPFFN--QIPVKAPNTARGEL 197
++L ++R + +R++ ++ D L+ ++ G + + V+ N GE
Sbjct: 146 I-TVLGSKRTKL--GLRDFVSLG-DLLQQIDIAQGKTVHVLKFDVRGLNLLDGEF 196
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK +L EA+ +RG A+ E + V ++ +LE NPT P ++ LLNGKW L YT+
Sbjct: 95 LKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSF 154
Query: 146 QSIL----QTQRPRFLRSVRNYQAINVDTLRAQNME--SGPF 181
+ P+ ++ Q I+ + QN SGP
Sbjct: 155 SQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPL 196
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
LK+ L+++ DRG AT E + + ++ +LE NPT P ++ LLN KW L+YT+
Sbjct: 99 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTS 157
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 82 KDAKVLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSD-LLNGKWEL 140
++ +VLK L++++ DRG A+ E + + + +LE NPT P + LLNGKW L
Sbjct: 90 EETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWIL 149
Query: 141 IYTT 144
YT+
Sbjct: 150 AYTS 153
>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
Length = 409
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 90 ELLEAIAPL-DRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSDLLNGKWELIYTT 144
+L++A+ + RG A+P+ VE + LEG+ + P SDL+ G+W L++TT
Sbjct: 77 KLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDSDLIEGRWRLMFTT 132
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK L++ + + G A E + V + +LE NPT P++ DLLNG W L+YT S
Sbjct: 135 LKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTAS 194
Query: 146 QSIL 149
+L
Sbjct: 195 SELL 198
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK+ L+++ DRG + + + + ++ +LE NPT P ++ LLNGKW L YTT
Sbjct: 99 LKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTF 158
Query: 146 QSI--LQTQRPRFLRSVRNYQAINVDTLRAQNME--SGPF 181
+ L ++ ++ Q I+ + L QN SGP
Sbjct: 159 AGLFPLLSRNLPLVKVEEISQTIDSENLTVQNSVQFSGPL 198
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSD-LLNGKWELIYTT 144
LK L++++ DRG A+ E + + + +LE NPT P ++ LLNGKW L YT+
Sbjct: 86 LKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTS 144
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSD-LLNGKWELIYTTS 145
LK L +++ DRG + + + + ++ +LE NPT P ++ LLNGKW L YT+
Sbjct: 94 LKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSF 153
Query: 146 QSI--LQTQRPRFLRSVRNY-QAINVDTLRAQNME--SGPF 181
+ L ++R L V Q I+ D+ QN +GPF
Sbjct: 154 VGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPF 194
>sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic
OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 239
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSDLLNGKWELIYTT 144
L LL +A D G +PE + V Q+A +L+ KEP+K+ L+ G WE++Y +
Sbjct: 68 LISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYC-VKEPVKNPLIFGDWEVVYCS 124
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLK-SDLLNGKWELIYTTS 145
LK L++ + D G A+ E + V ++ +LE NPT EP++ + LL G W LIYT
Sbjct: 149 LKRCLVDTVYGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAY 208
Query: 146 QSIL 149
+L
Sbjct: 209 SELL 212
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 86 VLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
+LK++L +++ +RG A+ E + + ++ +LE NP P ++ LLNGKW L YT+
Sbjct: 101 LLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS 160
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 86 VLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTT 144
+LK++L +++ +RG A+ E + + ++ +LE NP P ++ LLNGKW L YT+
Sbjct: 101 LLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS 160
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKSD-LLNGKWELIYTT 144
LK L ++ DRG A+ E + + ++ +LE NP P ++ LLNGKW L+YT+
Sbjct: 103 LKRVLAGSLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTS 161
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYT 143
LK L +++ + G +A E + V ++ +LE +NPT PL++ +LL+G W L+YT
Sbjct: 153 LKRCLADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYT 210
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 87 LKEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKEPLKS-DLLNGKWELIYTTS 145
LK L + + + G A E + V +I +LE +NPT+ P+++ +LL+G W L+YT
Sbjct: 137 LKRCLADTVYGTELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAF 196
Query: 146 QSIL 149
+L
Sbjct: 197 SELL 200
>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic
OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1
Length = 284
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 88 KEELLEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPTKE--PLKSDLLNGKWELIYTTS 145
K +LL A+ RG AT + + +E+ +EG N +E P+K L+G W L YT++
Sbjct: 64 KHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDPVK---LDGTWRLQYTSA 120
Query: 146 QSIL 149
++
Sbjct: 121 PDVV 124
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 98 LDRGAEATPEDQQRVEQIARKLEGVN-PTKEPLKSDLLNGKWELIYTTSQS 147
L+RG A+ +D +R E A++LE P D L GKW L+Y+++ S
Sbjct: 98 LNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFS 148
>sp|P23445|FLII_BACSU Flagellum-specific ATP synthase OS=Bacillus subtilis (strain 168)
GN=fliI PE=3 SV=2
Length = 438
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 42 KLNNNYQNNRNLSSSEYYHSSASQKWRASVSFFP---AFLNKGKDAKVLKEELLEAIAPL 98
+L + YQN+ +L + Y +S++ ++ F+P FL +G D L EE + A+ L
Sbjct: 374 ELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDEPALLEESIAALTSL 433
>sp|Q0I7L9|RPOC2_SYNS3 DNA-directed RNA polymerase subunit beta' OS=Synechococcus sp.
(strain CC9311) GN=rpoC2 PE=3 SV=1
Length = 1365
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 75 PAFLNKGKDAKVLKEELLEAIAPLDRGAEATPEDQQRVEQIARKLE-------GVNPTKE 127
P F N+ D KVLKE L A A + G AT +++ + K VN K
Sbjct: 36 PPFRNRVVDKKVLKE--LVAWAFKNHGTAATASMADQLKDLGFKYATQAAVSISVNDLKV 93
Query: 128 P-LKSDLLNGKWELIYTTSQSI---LQTQRPRFLRSVRNYQAIN---VDTLRAQNMESGP 180
P K DLL+ ELI T +S + T+ R + + + N VD ++ ++ P
Sbjct: 94 PAAKKDLLDQAEELITETEESYRLGVITEVERHTKVIDTWTETNERLVDAVKKNFNDNDP 153
Query: 181 FFNQIPVKAPNTARGEL 197
N + + A + ARG +
Sbjct: 154 -LNSVWMMANSGARGNM 169
>sp|Q9XW87|LONP2_CAEEL Lon protease homolog 2, peroxisomal OS=Caenorhabditis elegans
GN=Y75B8A.4 PE=3 SV=1
Length = 773
Score = 31.6 bits (70), Expect = 3.8, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 69 ASVSFFPAFLNKGKDAKVLKEEL---LEAIAPLDRGAEATPEDQQRVEQIARKLEGVNPT 125
A V ++N+ KDA LK ++ LEA P+D P + +VEQ+ KL + +
Sbjct: 185 ARVEMCIKWMNEKKDANTLKLKVPNSLEASFPVDGKKRKIPNVKNQVEQLEEKLNAIEFS 244
Query: 126 KE 127
E
Sbjct: 245 DE 246
>sp|Q03GG4|SYL_PEDPA Leucine--tRNA ligase OS=Pediococcus pentosaceus (strain ATCC 25745
/ 183-1w) GN=leuS PE=3 SV=1
Length = 805
Score = 30.8 bits (68), Expect = 6.2, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
Query: 66 KWRASVSFFPAFLNKGKDAKVLKEELLEAIAPLDR---GAEATPEDQQRVEQIARKLE-- 120
+W S +F +++ D K+ E+LL+ P+D GAE + L
Sbjct: 493 QWAGSSWYFLRYVDPKNDQKIADEDLLKEWLPVDLYVGGAEHAVLHLLYARFWHKVLYDL 552
Query: 121 GVNPTKEPLKSDLLNGKWELIYTTSQSILQTQRPRFLRSVRNYQAINVDTLRAQNMESGP 180
GV PTKEP + + G +I ++ + + + + DTLR M GP
Sbjct: 553 GVVPTKEPFQKLVNQG---MILGSNHEKMSKSKGNVVNPDDIVERFGADTLRLYEMFMGP 609
Query: 181 FFNQI 185
+
Sbjct: 610 LTESV 614
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 31 PPRVSFSYFPTKLNNNYQNNRNLSSSEYYHSSASQKWRASVS 72
P +V FS+ LN ++ NR L+S+ +H+ WR+ ++
Sbjct: 376 PSKVQFSF--ELLNKDFTRNRKLASTNIFHTENKWGWRSFIN 415
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,933,967
Number of Sequences: 539616
Number of extensions: 2901419
Number of successful extensions: 8558
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 8506
Number of HSP's gapped (non-prelim): 67
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)