Citrus Sinensis ID: 028555

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------
MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW
cccccccccccccccccccccccccccccEEEEEEccccEEEEcccccccccccccccEEEEcccccccccEEEEccccccccccccHHHHcccccccccccccccccccccccccEEEEEEcccEEEEEEccccccccHHHHHHHHHHHHHcccEEEccccccccccccHHHHcccccccEEEEEcHHHHHHHHHHHHcccccccc
ccccccccccHHHHHcccccccccccccEEEEEEEEccccEEEEccccccccccccccEEEEcccccHHHcEEEEcHHcccccccHHHHccHHHHHHHHcccccccccEEEccHHHHHEEEcccccEEEEcccccHHHEHHHcHHHHHHHHHcccEEEccccccccccccccHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHcc
mgcpnwledkpctsttsmqeyesnqagsgIIMVSHVgcgtwtkklssiqdtktldywtrcsvdrcclvhkasfcipdsqtweslplsalfnakndadnigddeillvPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICvheaggkvtdwrgspidldadqaerraifpsggilvtndnLHHQIVEMISsrssiflw
mgcpnwledkpctSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEaggkvtdwrgSPIDLDADQAERRAIFPsggilvtndnLHHQIVEmissrssiflw
MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW
***************************SGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMIS********
MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSS********************VHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSI**W
MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW
*GCPNWLEDKPCTS***********AGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRSSIFLW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query207 2.2.26 [Sep-21-2011]
Q9M0Y6397 Putative PAP-specific pho yes no 0.908 0.473 0.599 3e-67
Q38945373 PAP-specific phosphatase no no 0.850 0.471 0.315 1e-09
Q5BCG1352 3'(2'),5'-bisphosphate nu yes no 0.874 0.514 0.235 6e-08
Q8GY63357 Probable SAL3 phosphatase no no 0.425 0.246 0.35 6e-06
Q42546353 SAL1 phosphatase OS=Arabi no no 0.859 0.504 0.247 2e-05
Q59XQ1358 3'(2'),5'-bisphosphate nu N/A no 0.396 0.229 0.284 2e-05
O94505353 3'(2'),5'-bisphosphate nu yes no 0.444 0.260 0.288 3e-05
P0CY20364 3'(2'),5'-bisphosphate nu N/A no 0.396 0.225 0.272 4e-05
P0CY21364 3'(2'),5'-bisphosphate nu N/A no 0.396 0.225 0.272 4e-05
Q55F34332 3'(2'),5'-bisphosphate nu yes no 0.285 0.177 0.406 8e-05
>sp|Q9M0Y6|DPNPM_ARATH Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1 Back     alignment and function desciption
 Score =  254 bits (649), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 121/202 (59%), Positives = 151/202 (74%), Gaps = 14/202 (6%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRC 60
           MGCPNW  D             S+   +G +M+SH+GCGTWTKKL ++      D W RC
Sbjct: 207 MGCPNWPGD-------------SSDGSTGTLMLSHIGCGTWTKKLQNVSGNVAGD-WIRC 252

Query: 61  SVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMV 120
            VD C L++KA FCI +SQTWESLPLS  F+A   ++++   EILL+PTCCGSLCKYLMV
Sbjct: 253 FVDACVLMNKARFCIQESQTWESLPLSGFFDASTVSEDLKHKEILLLPTCCGSLCKYLMV 312

Query: 121 ATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPS 180
           A+GRASVF+LRA+ Q  IK+WDHAVGIICVHEAGGKVTDW G  I+L+ DQ+ERR IFP+
Sbjct: 313 ASGRASVFLLRAKTQRTIKSWDHAVGIICVHEAGGKVTDWEGDEINLEEDQSERRLIFPA 372

Query: 181 GGILVTNDNLHHQIVEMISSRS 202
           GG++V+N +LH+QI+EMISS S
Sbjct: 373 GGVVVSNGSLHNQILEMISSAS 394
Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 7
>sp|Q38945|DPNPH_ARATH PAP-specific phosphatase HAL2-like OS=Arabidopsis thaliana GN=AHL PE=2 SV=1 Back     alignment and function description
>sp|Q5BCG1|DPNP_EMENI 3'(2'),5'-bisphosphate nucleotidase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1769 PE=1 SV=1 Back     alignment and function description
>sp|Q8GY63|DPNP3_ARATH Probable SAL3 phosphatase OS=Arabidopsis thaliana GN=SAL3 PE=2 SV=1 Back     alignment and function description
>sp|Q42546|DPNP1_ARATH SAL1 phosphatase OS=Arabidopsis thaliana GN=SAL1 PE=1 SV=1 Back     alignment and function description
>sp|Q59XQ1|HAL22_CANAL 3'(2'),5'-bisphosphate nucleotidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HAL22 PE=3 SV=2 Back     alignment and function description
>sp|O94505|DPNP_SCHPO 3'(2'),5'-bisphosphate nucleotidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tol1 PE=3 SV=1 Back     alignment and function description
>sp|P0CY20|HAL21_CANAL 3'(2'),5'-bisphosphate nucleotidase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HAL21 PE=3 SV=1 Back     alignment and function description
>sp|P0CY21|HAL21_CANAW 3'(2'),5'-bisphosphate nucleotidase 1 OS=Candida albicans (strain WO-1) GN=HAL21 PE=3 SV=1 Back     alignment and function description
>sp|Q55F34|DPNP_DICDI 3'(2'),5'-bisphosphate nucleotidase OS=Dictyostelium discoideum GN=DDB_G0268652 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query207
224078840 411 predicted protein [Populus trichocarpa] 0.975 0.491 0.686 2e-75
255567433 414 diphosphonucleoside phosphohydrolase, pu 0.971 0.485 0.674 4e-75
359495718 437 PREDICTED: putative PAP-specific phospha 0.966 0.457 0.665 3e-73
356554991 403 PREDICTED: putative PAP-specific phospha 0.975 0.501 0.627 6e-72
297809703 393 inositol monophosphatase family protein 0.922 0.486 0.595 1e-66
15234590 397 putative PAP-specific phosphatase [Arabi 0.908 0.473 0.599 1e-65
449433900 411 PREDICTED: putative PAP-specific phospha 0.980 0.493 0.602 2e-64
449479384 411 PREDICTED: putative PAP-specific phospha 0.980 0.493 0.602 5e-64
356546680 423 PREDICTED: LOW QUALITY PROTEIN: putative 0.975 0.477 0.593 9e-64
357122444 404 PREDICTED: putative PAP-specific phospha 0.942 0.482 0.590 9e-62
>gi|224078840|ref|XP_002305648.1| predicted protein [Populus trichocarpa] gi|222848612|gb|EEE86159.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 140/204 (68%), Positives = 160/204 (78%), Gaps = 2/204 (0%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQ--DTKTLDYWT 58
           MGCPNW E     ST  +Q  ES  + SGI+MV+HVGCGTW ++LS +     K  + WT
Sbjct: 208 MGCPNWKEASSYNSTIDVQGSESVPSRSGILMVAHVGCGTWARQLSDLMGVSAKVPNGWT 267

Query: 59  RCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYL 118
           RC VD C LV KA FCI DSQTWES+PLSA F+A +DA  + D EILL+PTCCGSLCKYL
Sbjct: 268 RCFVDGCHLVPKARFCISDSQTWESVPLSAFFSATSDAGGVSDKEILLLPTCCGSLCKYL 327

Query: 119 MVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIF 178
           MVA+GRASVFILRARAQT IKAWDHAVGIICVHEAGGKVTDW+GS IDL ADQ ERR +F
Sbjct: 328 MVASGRASVFILRARAQTTIKAWDHAVGIICVHEAGGKVTDWKGSDIDLAADQVERRILF 387

Query: 179 PSGGILVTNDNLHHQIVEMISSRS 202
           PS G+LVTN  +H+QI+EMISS S
Sbjct: 388 PSMGVLVTNGTIHNQILEMISSTS 411

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255567433|ref|XP_002524696.1| diphosphonucleoside phosphohydrolase, putative [Ricinus communis] gi|223536057|gb|EEF37715.1| diphosphonucleoside phosphohydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359495718|ref|XP_003635071.1| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Vitis vinifera] gi|297745650|emb|CBI40861.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356554991|ref|XP_003545824.1| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|297809703|ref|XP_002872735.1| inositol monophosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297318572|gb|EFH48994.1| inositol monophosphatase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15234590|ref|NP_192418.1| putative PAP-specific phosphatase [Arabidopsis thaliana] gi|34395727|sp|Q9M0Y6.1|DPNPM_ARATH RecName: Full=Putative PAP-specific phosphatase, mitochondrial; AltName: Full=3'(2'),5'-bisphosphate nucleotidase; AltName: Full=3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; AltName: Full=DPNPase; Flags: Precursor gi|7267268|emb|CAB81051.1| 3'(2'), 5'-BISPHOSPHATE NUCLEOTIDASE-like protein [Arabidopsis thaliana] gi|21553719|gb|AAM62812.1| 3(2),5-BISPHOSPHATE NUCLEOTIDASE-like protein [Arabidopsis thaliana] gi|51968744|dbj|BAD43064.1| 3'(2'),5'-bisphosphate nucleotidase-like protein [Arabidopsis thaliana] gi|332657076|gb|AEE82476.1| putative PAP-specific phosphatase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449433900|ref|XP_004134734.1| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449479384|ref|XP_004155585.1| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356546680|ref|XP_003541751.1| PREDICTED: LOW QUALITY PROTEIN: putative PAP-specific phosphatase, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|357122444|ref|XP_003562925.1| PREDICTED: putative PAP-specific phosphatase, mitochondrial-like isoform 2 [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query207
TAIR|locus:2115698397 AT4G05090 "AT4G05090" [Arabido 0.908 0.473 0.599 2.6e-63
TAIR|locus:2147279373 HL "HAL2-like" [Arabidopsis th 0.869 0.482 0.321 4.9e-11
ASPGD|ASPL0000065989352 AN7034 [Emericella nidulans (t 0.381 0.224 0.297 6.2e-06
CGD|CAL0002967358 HAL22 [Candida albicans (taxid 0.396 0.229 0.295 3.6e-05
UNIPROTKB|Q59XQ1358 HAL22 "3'(2'),5'-bisphosphate 0.396 0.229 0.295 3.6e-05
TAIR|locus:2160831357 AT5G63990 [Arabidopsis thalian 0.439 0.254 0.329 5.7e-05
POMBASE|SPCC1753.04353 tol1 "3'(2'),5'-bisphosphate n 0.444 0.260 0.288 0.00011
CGD|CAL0000710364 HAL21 [Candida albicans (taxid 0.396 0.225 0.284 0.00011
UNIPROTKB|P0CY20364 HAL21 "3'(2'),5'-bisphosphate 0.396 0.225 0.284 0.00011
DICTYBASE|DDB_G0268652332 ippB "inositol polyphosphate p 0.429 0.268 0.354 0.00051
TAIR|locus:2115698 AT4G05090 "AT4G05090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 121/202 (59%), Positives = 151/202 (74%)

Query:     1 MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRC 60
             MGCPNW  D             S+   +G +M+SH+GCGTWTKKL ++      D W RC
Sbjct:   207 MGCPNWPGD-------------SSDGSTGTLMLSHIGCGTWTKKLQNVSGNVAGD-WIRC 252

Query:    61 SVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMV 120
              VD C L++KA FCI +SQTWESLPLS  F+A   ++++   EILL+PTCCGSLCKYLMV
Sbjct:   253 FVDACVLMNKARFCIQESQTWESLPLSGFFDASTVSEDLKHKEILLLPTCCGSLCKYLMV 312

Query:   121 ATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFPS 180
             A+GRASVF+LRA+ Q  IK+WDHAVGIICVHEAGGKVTDW G  I+L+ DQ+ERR IFP+
Sbjct:   313 ASGRASVFLLRAKTQRTIKSWDHAVGIICVHEAGGKVTDWEGDEINLEEDQSERRLIFPA 372

Query:   181 GGILVTNDNLHHQIVEMISSRS 202
             GG++V+N +LH+QI+EMISS S
Sbjct:   373 GGVVVSNGSLHNQILEMISSAS 394
GO:0006790 "sulfur compound metabolic process" evidence=ISS
GO:0008441 "3'(2'),5'-bisphosphate nucleotidase activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA
TAIR|locus:2147279 HL "HAL2-like" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000065989 AN7034 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0002967 HAL22 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59XQ1 HAL22 "3'(2'),5'-bisphosphate nucleotidase 2" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
TAIR|locus:2160831 AT5G63990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPCC1753.04 tol1 "3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0000710 HAL21 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|P0CY20 HAL21 "3'(2'),5'-bisphosphate nucleotidase 1" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268652 ippB "inositol polyphosphate phosphatase B" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.IV.2193.1
hypothetical protein (372 aa)
(Populus trichocarpa)
Predicted Functional Partners:
grail3.0175000802
hypothetical protein (462 aa)
     •  0.899
fgenesh4_pg.C_LG_II000227
SubName- Full=Putative uncharacterized protein; (426 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_V1509
hypothetical protein (427 aa)
     •  0.899
estExt_Genewise1_v1.C_LG_VIII2439
hypothetical protein (462 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query207
cd01517274 cd01517, PAP_phosphatase, PAP-phosphatase_like dom 3e-28
pfam00459269 pfam00459, Inositol_P, Inositol monophosphatase fa 5e-12
COG0483260 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatas 5e-10
TIGR01330353 TIGR01330, bisphos_HAL2, 3'(2'),5'-bisphosphate nu 8e-10
TIGR02067251 TIGR02067, his_9_HisN, histidinol-phosphatase, ino 3e-09
cd01637238 cd01637, IMPase_like, Inositol-monophosphatase-lik 2e-08
COG1218276 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfa 5e-08
cd01641248 cd01641, Bacterial_IMPase_like_1, Predominantly ba 7e-08
cd01639244 cd01639, IMPase, IMPase, inositol monophosphatase 4e-06
PRK12676263 PRK12676, PRK12676, bifunctional inositol-1 monoph 4e-06
cd01636184 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain 8e-06
cd01638242 cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phos 2e-05
cd01640293 cd01640, IPPase, IPPase; Inositol polyphosphate-1- 7e-05
PRK14076 569 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kin 1e-04
TIGR01331249 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nu 2e-04
cd01515257 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisp 2e-04
PLN02737363 PLN02737, PLN02737, inositol monophosphatase famil 4e-04
PLN02553270 PLN02553, PLN02553, inositol-phosphate phosphatase 0.004
>gnl|CDD|238775 cd01517, PAP_phosphatase, PAP-phosphatase_like domains Back     alignment and domain information 
 Score =  106 bits (267), Expect = 3e-28
 Identities = 50/200 (25%), Positives = 71/200 (35%), Gaps = 36/200 (18%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRC 60
           +GCPN   D                 G G +  +  G G W + L             R 
Sbjct: 109 IGCPNLPLD---------------DGGGGDLFSAVRGQGAWLRPLDGSSLQPLSV---RQ 150

Query: 61  SVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMV 120
             +       ASFC  +S              K              P    S  KY  V
Sbjct: 151 LTNAAR----ASFC--ESVESAHSSHRLQAAIKALGGTPQ-------PVRLDSQAKYAAV 197

Query: 121 ATGRASVFILRARAQTI-IKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFP 179
           A G A  ++    + +   K WDHA G++ V EAGGKVTD  G P+D        R +  
Sbjct: 198 ARGAADFYLRLPLSMSYREKIWDHAAGVLIVEEAGGKVTDADGKPLDFGKG----RKLLN 253

Query: 180 SGGILVTNDNLHHQIVEMIS 199
           +GG++     +H Q++E + 
Sbjct: 254 NGGLIAAPGEIHEQVLEALR 273

PAP-phosphatase is a member of the inositol monophosphatase family, and catalyses the hydrolysis of 3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In Saccharomyces cerevisiae, HAL2 (MET22) is involved in methionine biosynthesis and provides increased salt tolerance when over-expressed. Bacterial members of this domain family may differ in their substrate specificity and dephosphorylate different targets, as the substrate binding site does not appear to be conserved in that sub-set. Length = 274
>gnl|CDD|215930 pfam00459, Inositol_P, Inositol monophosphatase family Back     alignment and domain information
>gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233360 TIGR01330, bisphos_HAL2, 3'(2'),5'-bisphosphate nucleotidase, HAL2 family Back     alignment and domain information
>gnl|CDD|213680 TIGR02067, his_9_HisN, histidinol-phosphatase, inositol monophosphatase family Back     alignment and domain information
>gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains Back     alignment and domain information
>gnl|CDD|224139 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238819 cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases Back     alignment and domain information
>gnl|CDD|238817 cd01639, IMPase, IMPase, inositol monophosphatase and related domains Back     alignment and domain information
>gnl|CDD|183673 PRK12676, PRK12676, bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; Reviewed Back     alignment and domain information
>gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain Back     alignment and domain information
>gnl|CDD|238816 cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family Back     alignment and domain information
>gnl|CDD|238818 cd01640, IPPase, IPPase; Inositol polyphosphate-1-phosphatase, a member of the Mg++ dependent family of inositol monophosphatase-like domains, hydrolyzes the 1' position phosphate from inositol 1,3,4-trisphosphate and inositol 1,4-bisphosphate Back     alignment and domain information
>gnl|CDD|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>gnl|CDD|130398 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nucleotidase, bacterial Back     alignment and domain information
>gnl|CDD|238773 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (FBPase class IV) Back     alignment and domain information
>gnl|CDD|215392 PLN02737, PLN02737, inositol monophosphatase family protein Back     alignment and domain information
>gnl|CDD|178168 PLN02553, PLN02553, inositol-phosphate phosphatase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 207
KOG1528351 consensus Salt-sensitive 3'-phosphoadenosine-5'-ph 99.96
PLN02553270 inositol-phosphate phosphatase 99.94
PRK10757267 inositol monophosphatase; Provisional 99.94
TIGR02067251 his_9_proposed histidinol-phosphate phosphatase Hi 99.93
PLN02911296 inositol-phosphate phosphatase 99.93
KOG2951279 consensus Inositol monophosphatase [Carbohydrate t 99.93
cd01641248 Bacterial_IMPase_like_1 Predominantly bacterial fa 99.93
COG0483260 SuhB Archaeal fructose-1,6-bisphosphatase and rela 99.93
PLN02737363 inositol monophosphatase family protein 99.93
TIGR01330353 bisphos_HAL2 3'(2'),5'-bisphosphate nucleotidase, 99.92
cd01517274 PAP_phosphatase PAP-phosphatase_like domains. PAP- 99.91
PRK12676263 bifunctional inositol-1 monophosphatase/fructose-1 99.91
cd01515257 Arch_FBPase_1 Archaeal fructose-1,6-bisphosphatase 99.9
cd01643242 Bacterial_IMPase_like_2 Bacterial family of Mg++ d 99.89
cd01639244 IMPase IMPase, inositol monophosphatase and relate 99.89
PF00459270 Inositol_P: Inositol monophosphatase family; Inter 99.89
cd01638242 CysQ CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate 99.88
PRK14076 569 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 99.87
cd01637238 IMPase_like Inositol-monophosphatase-like domains. 99.86
TIGR01331249 bisphos_cysQ 3'(2'),5'-bisphosphate nucleotidase, 99.86
cd01640293 IPPase IPPase; Inositol polyphosphate-1-phosphatas 99.85
COG1218276 CysQ 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 99.85
PRK10931246 adenosine-3'(2'),5'-bisphosphate nucleotidase; Pro 99.83
cd01642244 Arch_FBPase_2 Putative fructose-1,6-bisphosphatase 99.56
cd01636184 FIG FIG, FBPase/IMPase/glpX-like domain. A superfa 99.14
KOG3853350 consensus Inositol monophosphatase [Signal transdu 98.81
KOG3099340 consensus Bisphosphate 3'-nucleotidase BPNT1/Inosi 98.75
>KOG1528 consensus Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1 [Nucleotide transport and metabolism; Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=99.96  E-value=5.5e-30  Score=214.35  Aligned_cols=179  Identities=30%  Similarity=0.415  Sum_probs=140.0

Q ss_pred             CCCCCCCCCCCCCCCCcccccccCCCCcceEEEEEcCCceeeeeCCCCccccccCcceeeeecCCCCCCceEEEeecCCc
Q 028555            1 MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQT   80 (207)
Q Consensus         1 ~gcpn~~~~~~~~~~~~~~~~vV~~P~~g~~y~A~rG~GA~~n~~~~~~~~~~~~~~~~l~v~~~~~l~~~~~~~~~~~~   80 (207)
                      |||||||..+++.-.-+.      .-..|.+|+|.+|.|+|...+....     ..+.+++|+...+++++.|+.+....
T Consensus       168 mgCPNlpl~s~~~~~~s~------~es~Gclf~a~~G~G~y~qsL~~~s-----~p~~kv~Vs~v~~~~~a~f~Es~e~~  236 (351)
T KOG1528|consen  168 MGCPNLPLASYAAKDKSS------PESVGCLFFAVRGSGTYVQSLDNES-----LPVIKVHVSSVENPKDAKFCESVEKG  236 (351)
T ss_pred             ecCCCCcchhhhhhccCC------CCcceEEEEEEecCceEeeeccCCC-----CCceEEEEecccChhhceeecccccC
Confidence            799999985543211111      1233999999999999998765432     11257899999999999998775444


Q ss_pred             cccchhhHHHhhhcccccCCcccccccccccchHHhHHHhhcCcccEEEEecccCCCCcchhHhhHHHHHHhcCCeeecC
Q 028555           81 WESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDW  160 (207)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~GS~~~~~~VA~G~~d~~~~~~~~~~~~~~WD~AAg~li~~EAGg~vtd~  160 (207)
                      ++....+..+...+        +|+.++.++.|.+|||++|.|++|+|++|++..+..++||||||.+|++||||+|||.
T Consensus       237 ~s~h~~~~~IankL--------gI~~~P~~i~SqaKYaalarGdaeVyLrf~~k~y~EkIWDHAaG~iiV~EAGGvVtDa  308 (351)
T KOG1528|consen  237 HSIHGFQSTIANKL--------GIKKLPTRIDSQAKYAALARGDAEVYLRFPLKGYREKIWDHAAGSIIVHEAGGVVTDA  308 (351)
T ss_pred             CccchhhHHHHHhh--------CcccCCceechhHHHHHHhcCCcceeEeecccccchhhhhcccccEEEEecCceeecC
Confidence            44333333343333        4555667899999999999999999999998888999999999999999999999999


Q ss_pred             CCCCCCCCchhHhhhhcCCCCeEEEeCHHHHHHHHHHHhccc
Q 028555          161 RGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISSRS  202 (207)
Q Consensus       161 ~G~~~~~~~~~~~~~~~~~~~~~iaa~~~~~~~il~~l~~~~  202 (207)
                      .|+|++|..+    +.+..+.|||+++..+|+.+++.+.+..
T Consensus       309 ~G~pLDFs~G----r~L~~~~GiIvs~~~L~~~il~av~~si  346 (351)
T KOG1528|consen  309 AGKPLDFSKG----RYLAHKTGIIVSTKKLHPKILEAVRESI  346 (351)
T ss_pred             CCCcccccCC----ceeecCCcEEEEchhhHHHHHHHHHHhh
Confidence            9999999875    3355689999999999999999887654

>PLN02553 inositol-phosphate phosphatase Back     alignment and domain information
>PRK10757 inositol monophosphatase; Provisional Back     alignment and domain information
>TIGR02067 his_9_proposed histidinol-phosphate phosphatase HisN, inositol monophosphatase family Back     alignment and domain information
>PLN02911 inositol-phosphate phosphatase Back     alignment and domain information
>KOG2951 consensus Inositol monophosphatase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01641 Bacterial_IMPase_like_1 Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases Back     alignment and domain information
>COG0483 SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02737 inositol monophosphatase family protein Back     alignment and domain information
>TIGR01330 bisphos_HAL2 3'(2'),5'-bisphosphate nucleotidase, HAL2 family Back     alignment and domain information
>cd01517 PAP_phosphatase PAP-phosphatase_like domains Back     alignment and domain information
>PRK12676 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase; Reviewed Back     alignment and domain information
>cd01515 Arch_FBPase_1 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (FBPase class IV) Back     alignment and domain information
>cd01643 Bacterial_IMPase_like_2 Bacterial family of Mg++ dependent phosphatases, related to inositol monophosphatases Back     alignment and domain information
>cd01639 IMPase IMPase, inositol monophosphatase and related domains Back     alignment and domain information
>PF00459 Inositol_P: Inositol monophosphatase family; InterPro: IPR000760 It has been shown that several proteins share two sequence motifs [] Back     alignment and domain information
>cd01638 CysQ CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family Back     alignment and domain information
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd01637 IMPase_like Inositol-monophosphatase-like domains Back     alignment and domain information
>TIGR01331 bisphos_cysQ 3'(2'),5'-bisphosphate nucleotidase, bacterial Back     alignment and domain information
>cd01640 IPPase IPPase; Inositol polyphosphate-1-phosphatase, a member of the Mg++ dependent family of inositol monophosphatase-like domains, hydrolyzes the 1' position phosphate from inositol 1,3,4-trisphosphate and inositol 1,4-bisphosphate Back     alignment and domain information
>COG1218 CysQ 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10931 adenosine-3'(2'),5'-bisphosphate nucleotidase; Provisional Back     alignment and domain information
>cd01642 Arch_FBPase_2 Putative fructose-1,6-bisphosphatase or related enzymes of inositol monophosphatase family Back     alignment and domain information
>cd01636 FIG FIG, FBPase/IMPase/glpX-like domain Back     alignment and domain information
>KOG3853 consensus Inositol monophosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG3099 consensus Bisphosphate 3'-nucleotidase BPNT1/Inositol polyphosphate 1-phosphatase [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query207
1qgx_A357 X-Ray Structure Of Yeast Hal2p Length = 357 8e-04
>pdb|1QGX|A Chain A, X-Ray Structure Of Yeast Hal2p Length = 357 Back     alignment and structure 
Iteration: 1

 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 113 SLCKYLMVATGRASVFI-LRARAQTIIKAWDHAVGIICVHEAGGKVTD-WRGSPIDL 167
           S  KY ++A G A V++ L  +     K WDHA G + VHEAGG  TD     P+D 
Sbjct: 264 SQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDF 320

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query207
1ka1_A357 Halotolerance protein HAL2; nucleotidase, salt tol 3e-30
3ryd_A273 Inositol monophosphatase family protein; impase fo 1e-12
3t0j_A283 Impase II, inositol monophosphatase family protein 2e-12
1lbv_A252 Fbpase/impase, fructose 1,6-bisphosphatase/inosito 1e-11
1g0h_A252 Inositol monophosphatase; homodimer, complexed wit 2e-11
2p3n_A256 Inositol-1-monophosphatase; tetramer, hydrolase; 2 4e-11
1vdw_A254 Hypothetical protein PH1897; homodimer, riken stru 5e-11
2fvz_A273 Inositol monophosphatase 2; inositol metabolism, s 5e-11
1xi6_A262 Extragenic suppressor; structural genomics, southe 2e-10
1jp4_A308 3'(2'),5'-bisphosphate nucleotidase; protein-produ 2e-10
2bji_A277 Inositol-1(OR 4)-monophosphatase; hydrolase, aspar 3e-10
2qfl_A267 Inositol-1-monophosphatase; impase extragenic supp 4e-10
3lv0_A267 Extragenic suppressor protein SUHB; niaid, seattle 5e-10
2q74_A299 Inositol-1-monophosphatase; alpha-beta-alpha-beta- 4e-09
1inp_A400 Inositol polyphosphate 1-phosphatase; hydrolase(ph 8e-09
2pcr_A264 Inositol-1-monophosphatase; bipolar disorder, stru 2e-08
>1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance, inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces cerevisiae} SCOP: e.7.1.1 PDB: 1k9y_A 1ka0_A* 1k9z_A* 1qgx_A* Length = 357 Back     alignment and structure
 Score =  113 bits (283), Expect = 3e-30
 Identities = 44/211 (20%), Positives = 73/211 (34%), Gaps = 34/211 (16%)

Query: 1   MGCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRC 60
           +GCPN         ++   +        G I  +  G G +    S  +       WT+ 
Sbjct: 173 IGCPNL------VLSSYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAES------WTKI 220

Query: 61  SVDRCCLVHKASFCIPDSQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMV 120
            V                +   S             + +   +         S  KY ++
Sbjct: 221 HVRHLKDTKDMITLEGVEKGHSSHDEQTAI-----KNKLNISK----SLHLDSQAKYCLL 271

Query: 121 ATGRASVFI-LRARAQTIIKAWDHAVGIICVHEAGGKVTDW-RGSPIDLDADQAERRAIF 178
           A G A V++ L  +     K WDHA G + VHEAGG  TD     P+D            
Sbjct: 272 ALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGIHTDAMEDVPLDFG-----NGRTL 326

Query: 179 PSGGILVTNDN--LHHQIV----EMISSRSS 203
            + G++ ++    LH  +V    ++I SR++
Sbjct: 327 ATKGVIASSGPRELHDLVVSTSCDVIQSRNA 357
>3ryd_A Inositol monophosphatase family protein; impase fold, FIG superfamily protein, hydrolase; HET: SRT; 2.37A {Staphylococcus aureus} PDB: 3qmf_A Length = 273 Back     alignment and structure
>3t0j_A Impase II, inositol monophosphatase family protein; FIG superfamily, hydrolase; HET: PG4; 2.59A {Staphylococcus aureus} Length = 283 Back     alignment and structure
>1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A* Length = 252 Back     alignment and structure
>1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A* Length = 252 Back     alignment and structure
>2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima} PDB: 2p3v_A* Length = 256 Back     alignment and structure
>1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1 Length = 254 Back     alignment and structure
>2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A Length = 273 Back     alignment and structure
>1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1 Length = 262 Back     alignment and structure
>1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus norvegicus} SCOP: e.7.1.1 PDB: 2wef_A* Length = 308 Back     alignment and structure
>2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A Length = 277 Back     alignment and structure
>2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli} Length = 267 Back     alignment and structure
>3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} PDB: 3luz_A Length = 267 Back     alignment and structure
>2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis} Length = 299 Back     alignment and structure
>1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric monoester); 2.30A {Bos taurus} SCOP: e.7.1.1 Length = 400 Back     alignment and structure
>2pcr_A Inositol-1-monophosphatase; bipolar disorder, struct genomics, NPPSFA, national project on protein structural AN functional analyses; 2.60A {Aquifex aeolicus} Length = 264 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query207
3lv0_A267 Extragenic suppressor protein SUHB; niaid, seattle 99.96
3ryd_A273 Inositol monophosphatase family protein; impase fo 99.95
3t0j_A283 Impase II, inositol monophosphatase family protein 99.95
2p3n_A256 Inositol-1-monophosphatase; tetramer, hydrolase; 2 99.95
2bji_A277 Inositol-1(OR 4)-monophosphatase; hydrolase, aspar 99.94
2pcr_A264 Inositol-1-monophosphatase; bipolar disorder, stru 99.94
2fvz_A273 Inositol monophosphatase 2; inositol metabolism, s 99.94
2q74_A299 Inositol-1-monophosphatase; alpha-beta-alpha-beta- 99.94
1g0h_A252 Inositol monophosphatase; homodimer, complexed wit 99.93
2qfl_A267 Inositol-1-monophosphatase; impase extragenic supp 99.93
1lbv_A252 Fbpase/impase, fructose 1,6-bisphosphatase/inosito 99.92
1vdw_A254 Hypothetical protein PH1897; homodimer, riken stru 99.92
1xi6_A262 Extragenic suppressor; structural genomics, southe 99.92
1ka1_A357 Halotolerance protein HAL2; nucleotidase, salt tol 99.91
3b8b_A292 CYSQ, sulfite synthesis pathway protein; 3'-phosph 99.89
1jp4_A308 3'(2'),5'-bisphosphate nucleotidase; protein-produ 99.89
1inp_A400 Inositol polyphosphate 1-phosphatase; hydrolase(ph 99.84
1nuw_A337 Fructose-1,6-bisphosphatase; allosteric enzymes, g 99.74
2gq1_A332 Fructose-1,6-bisphosphatase; allosteric activator 99.41
2fhy_A374 Fructose-1,6-bisphosphatase 1; allosteric inhibito 98.8
1dcu_A357 Fructose-1,6-bisphosphatase; chloroplast, photosyn 97.93
>3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} SCOP: e.7.1.0 PDB: 3luz_A Back     alignment and structure
Probab=99.96  E-value=1.9e-29  Score=213.01  Aligned_cols=162  Identities=19%  Similarity=0.240  Sum_probs=125.3

Q ss_pred             CCCCCCCCCCCCCCCcccccccCCCCcceEEEEEcCCceeeeeCCCCccccccCcceeeeecCCCCCCceEEEeecCCcc
Q 028555            2 GCPNWLEDKPCTSTTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTW   81 (207)
Q Consensus         2 gcpn~~~~~~~~~~~~~~~~vV~~P~~g~~y~A~rG~GA~~n~~~~~~~~~~~~~~~~l~v~~~~~l~~~~~~~~~~~~~   81 (207)
                      |-|.+.++..+.-..+...||||+|.++++|+|.+|+|||+|+             +||+++...+++++.++++.++..
T Consensus       101 g~p~f~vsIAl~~~g~pv~GvV~~P~~~e~~~A~~G~GA~~ng-------------~~i~vs~~~~l~~~~v~~~~~~~~  167 (267)
T 3lv0_A          101 GIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFND-------------RRCRVSARRRLEDCVIATGMPHLG  167 (267)
T ss_dssp             TCSCCEEEEEEEETTEEEEEEEEETTTTEEEEEETTTEEEETT-------------EECCCCCCCSGGGCEEEECCCCC-
T ss_pred             CCCceEEEEEEEECCEEEEEEEecCCCccEEEEECCccccCCC-------------eecccCCCCChhhcEEEEecCccc
Confidence            4455555554444567788999999999999999999999998             899999988899998888766432


Q ss_pred             ccc--hhhHHHhhhcccccCCcccccccccccchH-HhHHHhhcCcccEEEEecccCCCCcchhHhhHHHHHHhcCCeee
Q 028555           82 ESL--PLSALFNAKNDADNIGDDEILLVPTCCGSL-CKYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVT  158 (207)
Q Consensus        82 ~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~GS~-~~~~~VA~G~~d~~~~~~~~~~~~~~WD~AAg~li~~EAGg~vt  158 (207)
                      ...  .....+..+....    .++    |++||+ +++|+||+|++|+|+     +.++++||+|||.+|++||||.+|
T Consensus       168 ~~~~~~~~~~~~~l~~~~----~~~----r~~Gsaal~l~~vA~G~~d~y~-----~~~~~~WD~AAg~liv~eAGG~vt  234 (267)
T 3lv0_A          168 RPGHGTYLIELRNVMAEV----SGI----RRFGTAALDLAYVAAGRTDGFW-----EDNLQIWDMAAGILMVREAGGFVT  234 (267)
T ss_dssp             -CCHHHHHHHHHHHHTTC----SEE----EBCSCSHHHHHHHHTTSSSEEE-----ESSCCHHHHHHHHHHHHHTTCEEE
T ss_pred             ccchHHHHHHHHHHHHhc----CeE----EEecHHHHHHHHHhCcCccEEE-----ECCCCHHHHHHHHHHHHhCCCEEE
Confidence            111  1112233332211    133    567885 599999999999999     567999999999999999999999


Q ss_pred             cCCCCCCCCCchhHhhhhcCCCCeEEEeCHHHHHHHHHHHhc
Q 028555          159 DWRGSPIDLDADQAERRAIFPSGGILVTNDNLHHQIVEMISS  200 (207)
Q Consensus       159 d~~G~~~~~~~~~~~~~~~~~~~~~iaa~~~~~~~il~~l~~  200 (207)
                      |++|+|+.+           .+..++|+++.+|+++++.++.
T Consensus       235 d~~G~~~~~-----------~~~~iia~~~~l~~~l~~~l~~  265 (267)
T 3lv0_A          235 DKEGGNDIF-----------RKKNIIAGNEHIRIKLERALKK  265 (267)
T ss_dssp             CTTSSSCHH-----------HHTCEEEECHHHHHHHHHHHHT
T ss_pred             CCCCCcccC-----------CCCEEEEECHHHHHHHHHHHhc
Confidence            999998642           2567999999999999999875
>3ryd_A Inositol monophosphatase family protein; impase fold, FIG superfamily protein, hydrolase; HET: SRT; 2.37A {Staphylococcus aureus} PDB: 3qmf_A Back     alignment and structure
>3t0j_A Impase II, inositol monophosphatase family protein; FIG superfamily, hydrolase; HET: PG4; 2.59A {Staphylococcus aureus} Back     alignment and structure
>2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima} PDB: 2p3v_A* Back     alignment and structure
>2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A Back     alignment and structure
>2pcr_A Inositol-1-monophosphatase; bipolar disorder, struct genomics, NPPSFA, national project on protein structural AN functional analyses; 2.60A {Aquifex aeolicus} Back     alignment and structure
>2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A Back     alignment and structure
>2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A* Back     alignment and structure
>2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A* Back     alignment and structure
>1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1 Back     alignment and structure
>1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1 Back     alignment and structure
>1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance, inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces cerevisiae} SCOP: e.7.1.1 PDB: 1k9y_A 1ka0_A* 1k9z_A* 1qgx_A* Back     alignment and structure
>3b8b_A CYSQ, sulfite synthesis pathway protein; 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus norvegicus} SCOP: e.7.1.1 PDB: 2wef_A* Back     alignment and structure
>1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric monoester); 2.30A {Bos taurus} SCOP: e.7.1.1 Back     alignment and structure
>1nuw_A Fructose-1,6-bisphosphatase; allosteric enzymes, gluconeogenesis, hydrola; HET: F6P; 1.30A {Sus scrofa} SCOP: e.7.1.1 PDB: 1eyi_A* 1eyj_A* 1cnq_A* 1eyk_A* 1nux_A* 1nuy_A* 1nuz_A* 1nv0_A* 1nv1_A* 1nv2_A* 1nv3_A* 1nv4_A* 1nv5_A* 1nv6_A* 1nv7_A* 1q9d_A* 2qvu_A* 2qvv_A* 1fj6_A* 1fj9_A* ... Back     alignment and structure
>2gq1_A Fructose-1,6-bisphosphatase; allosteric activator site, quaternary conformation, hydrolas; 1.45A {Escherichia coli} PDB: 2owz_A* 2ox3_A* 2q8m_A* 2qvr_A* Back     alignment and structure
>2fhy_A Fructose-1,6-bisphosphatase 1; allosteric inhibitors human fbpase, benzoxazole, intersubunit allosteric inhibition of human fpbase, hydrolase; HET: A37; 2.95A {Homo sapiens} Back     alignment and structure
>1dcu_A Fructose-1,6-bisphosphatase; chloroplast, photosynthesis, redox regulation, thioredoxin, allostery, hydrolase; 2.20A {Pisum sativum} SCOP: e.7.1.1 PDB: 1d9q_A 1dbz_A 1spi_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 207
d1inpa_400 e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase 3e-14
d1ka1a_354 e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP p 2e-11
d1jp4a_304 e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxI 2e-10
d2hhma_272 e.7.1.1 (A:) Inositol monophosphatase {Human (Homo 2e-09
d1lbva_252 e.7.1.1 (A:) Archaeal inositol monophosphatase/fru 4e-09
d1vdwa_253 e.7.1.1 (A:) Archaeal inositol monophosphatase/fru 3e-08
d1g0ha_252 e.7.1.1 (A:) Archaeal inositol monophosphatase/fru 1e-07
d1xi6a_249 e.7.1.1 (A:) Archaeal inositol monophosphatase/fru 6e-07
>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} Length = 400 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Carbohydrate phosphatase
superfamily: Carbohydrate phosphatase
family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
domain: Inositol polyphosphate 1-phosphatase
species: Cow (Bos taurus), brain [TaxId: 9913]

 Score = 68.1 bits (165), Expect = 3e-14
 Identities = 23/197 (11%), Positives = 48/197 (24%), Gaps = 29/197 (14%)

Query: 18  MQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPD 77
           + +    +   G         GT    L     T++                   F +  
Sbjct: 206 VSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQGTQNPSSEGSCRFSVVI 265

Query: 78  SQTWESLPLSALFNAKNDADNIGDDEILLVPTCCGSLCKYLMVATGRASVFILRARAQTI 137
           S + +     AL +   +           +    G+  K L V  G A ++I        
Sbjct: 266 STSEKETIKGALSHVCGER----------IFRAAGAGYKSLCVILGLADIYIFSEDT--- 312

Query: 138 IKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQAERRAIFP---------------SGG 182
              WD       +   GG + D +           +   +                  GG
Sbjct: 313 TFKWDSCAAHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGG 372

Query: 183 ILVT-NDNLHHQIVEMI 198
           ++   ++      +  +
Sbjct: 373 LIAYRSEKQLETFLSRL 389
>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP phosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 354 Back     information, alignment and structure
>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 304 Back     information, alignment and structure
>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 272 Back     information, alignment and structure
>d1lbva_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252 Back     information, alignment and structure
>d1vdwa_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 253 Back     information, alignment and structure
>d1g0ha_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 252 Back     information, alignment and structure
>d1xi6a_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 249 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query207
d2hhma_272 Inositol monophosphatase {Human (Homo sapiens) [Ta 99.91
d1ka1a_354 3';5'-adenosine bisphosphatase, PAP phosphatase {B 99.91
d1lbva_252 Archaeal inositol monophosphatase/fructose-1,6-bis 99.9
d1vdwa_253 Archaeal inositol monophosphatase/fructose-1,6-bis 99.88
d1g0ha_252 Archaeal inositol monophosphatase/fructose-1,6-bis 99.88
d1xi6a_249 Archaeal inositol monophosphatase/fructose-1,6-bis 99.86
d1inpa_400 Inositol polyphosphate 1-phosphatase {Cow (Bos tau 99.81
d1jp4a_304 PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} 99.76
>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Carbohydrate phosphatase
superfamily: Carbohydrate phosphatase
family: Inositol monophosphatase/fructose-1,6-bisphosphatase-like
domain: Inositol monophosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-25  Score=185.40  Aligned_cols=155  Identities=21%  Similarity=0.253  Sum_probs=114.1

Q ss_pred             CCCcccccccCCCCcceEEEEEcCCceeeeeCCCCccccccCcceeeeecCCCCCCceEEEeecCCccccchhhHHHhhh
Q 028555           14 STTSMQEYESNQAGSGIIMVSHVGCGTWTKKLSSIQDTKTLDYWTRCSVDRCCLVHKASFCIPDSQTWESLPLSALFNAK   93 (207)
Q Consensus        14 ~~~~~~~~vV~~P~~g~~y~A~rG~GA~~n~~~~~~~~~~~~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   93 (207)
                      ...+...|+||+|..+++|+|.+|+|||+|+             ++++++....++...+................+...
T Consensus       109 ~~~~~~~gvi~~P~~~~~~~a~~G~Ga~~n~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (272)
T d2hhma_         109 VNKKIEFGVVYSCVEGKMYTARKGKGAFCNG-------------QKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNM  175 (272)
T ss_dssp             ETTEEEEEEEEETTTTEEEEEETTSCEEETT-------------EECCCCCCCCGGGCEEECCCCSCCCHHHHHHHHHHH
T ss_pred             ccCcccccceeccccCceEEEcCCcccccCC-------------cccccccccchhhhheeeeecccccchhhhhhhhhh
Confidence            3556678999999999999999999999998             778888777787777766554332211111111111


Q ss_pred             cccccCCcccccccccccchHH-hHHHhhcCcccEEEEecccCCCCcchhHhhHHHHHHhcCCeeecCCCCCCCCCchhH
Q 028555           94 NDADNIGDDEILLVPTCCGSLC-KYLMVATGRASVFILRARAQTIIKAWDHAVGIICVHEAGGKVTDWRGSPIDLDADQA  172 (207)
Q Consensus        94 ~~~~~~~~~~i~~~~~~~GS~~-~~~~VA~G~~d~~~~~~~~~~~~~~WD~AAg~li~~EAGg~vtd~~G~~~~~~~~~~  172 (207)
                      .........++    |..||++ ++|+||.|++|+|+     ..+.++||+|||.+|++||||.+||++|+|++++    
T Consensus       176 ~~~~~~~~~~i----r~~Gs~~l~~~~va~G~~d~~v-----~~~~~~wD~aAg~li~~eaGg~vtd~~G~~~~~~----  242 (272)
T d2hhma_         176 EKLFCIPVHGI----RSVGTAAVNMCLVATGGADAYY-----EMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLM----  242 (272)
T ss_dssp             HHHHTTTCSEE----EBCSCHHHHHHHHHHTSSSEEE-----EESCCHHHHHHHHHHHHHTTCEEECTTSSCCCTT----
T ss_pred             hccccccccce----eeechHHHHHHHhccCCeeEEe-----ecCCChhhhHHHHHHHHHCCCeEECCCCCccCCC----
Confidence            10000000133    5678765 99999999999999     4578999999999999999999999999999874    


Q ss_pred             hhhhcCCCCeEEEe-CHHHHHHHHHHHhcc
Q 028555          173 ERRAIFPSGGILVT-NDNLHHQIVEMISSR  201 (207)
Q Consensus       173 ~~~~~~~~~~~iaa-~~~~~~~il~~l~~~  201 (207)
                             ++++|++ ++.+|+.+++.++..
T Consensus       243 -------~~~ii~a~~~~~~~~l~~~l~~~  265 (272)
T d2hhma_         243 -------SRRVIAANNRILAERIAKEIQVI  265 (272)
T ss_dssp             -------SSEEEEESSHHHHHHHHHHCCCC
T ss_pred             -------CCcEEEECCHHHHHHHHHHhhhc
Confidence                   5667776 466789999988754
>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP phosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lbva_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1vdwa_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1g0ha_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1xi6a_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} Back     information, alignment and structure
>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure