BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028563
MVLYYKSFHFSSECSLISYLRIYTCVSHFPLLSGDLHLLERVANVLTSLPFIALGLQTPR
KNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMIATATVCLSRALRDENPKML
MAASALALPIQPLMVSAVHTGMMEVAFAKRALNDPNLRMAHTVHKVSSLLGGVFFIADDV
FPETPYLHAAWHLAAAVGVGTCNKLLE

High Scoring Gene Products

Symbol, full name Information P value
AT1G70900 protein from Arabidopsis thaliana 4.0e-74
AT1G23110 protein from Arabidopsis thaliana 3.2e-72

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028563
        (207 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013935 - symbol:AT1G70900 "AT1G70900" species...   748  4.0e-74   1
TAIR|locus:2201215 - symbol:AT1G23110 "AT1G23110" species...   730  3.2e-72   1


>TAIR|locus:2013935 [details] [associations]
            symbol:AT1G70900 "AT1G70900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            EMBL:CP002684 EMBL:AC008148 ProtClustDB:CLSN2689133 EMBL:AY050997
            EMBL:AY079318 IPI:IPI00528337 PIR:F96733 RefSeq:NP_565005.1
            UniGene:At.11632 EnsemblPlants:AT1G70900.1 GeneID:843429
            KEGG:ath:AT1G70900 TAIR:At1g70900 InParanoid:Q9SSK4 OMA:CLRPIHC
            PhylomeDB:Q9SSK4 ArrayExpress:Q9SSK4 Genevestigator:Q9SSK4
            Uniprot:Q9SSK4
        Length = 244

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 138/176 (78%), Positives = 158/176 (89%)

Query:    32 LSGDLHLLERVANVLTSLPFIALGLQTPRKNLNMTLYANSLVGVGVTSSLYHSSRGKLRK 91
             + GD  +LE  ANV+TS+PFI LG+Q PRKNLNM +YANSL+GVG+ SSLYHSSRGK RK
Sbjct:    69 IHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGIASSLYHSSRGKFRK 128

Query:    92 YLRWADYAMIATATVCLSRALRDENPKMLMAASALALPIQPLMVSAVHTGMMEVAFAKRA 151
             YLRWADY MIATAT+CL+RALR+ENPK LMAASALALP QPL+VSAVHTGMMEVAFAKRA
Sbjct:   129 YLRWADYTMIATATICLTRALREENPKFLMAASALALPFQPLVVSAVHTGMMEVAFAKRA 188

Query:   152 LNDPNLRMAHTVHKVSSLLGGVFFIADDVFPETPYLHAAWHLAAAVGVGTCNKLLE 207
             L DP+L+MAH VHK+SSLLGG  FIADD+FPETP++HA WHLAAA+GVGTCNKLL+
Sbjct:   189 LEDPDLKMAHDVHKMSSLLGGALFIADDLFPETPFIHAGWHLAAAIGVGTCNKLLQ 244


>TAIR|locus:2201215 [details] [associations]
            symbol:AT1G23110 "AT1G23110" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            EMBL:CP002684 EMBL:AY648308 IPI:IPI00520002 RefSeq:NP_001117336.1
            RefSeq:NP_001117337.1 RefSeq:NP_001185068.1 RefSeq:NP_001185069.1
            RefSeq:NP_173724.2 UniGene:At.41569 UniGene:At.50783
            EnsemblPlants:AT1G23110.1 EnsemblPlants:AT1G23110.2
            EnsemblPlants:AT1G23110.3 EnsemblPlants:AT1G23110.4
            EnsemblPlants:AT1G23110.5 GeneID:838919 KEGG:ath:AT1G23110
            TAIR:At1g23110 InParanoid:Q6DSU0 OMA:IADDFFP PhylomeDB:Q6DSU0
            ProtClustDB:CLSN2689133 Genevestigator:Q6DSU0 Uniprot:Q6DSU0
        Length = 248

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 137/176 (77%), Positives = 152/176 (86%)

Query:    32 LSGDLHLLERVANVLTSLPFIALGLQTPRKNLNMTLYANSLVGVGVTSSLYHSSRGKLRK 91
             + GD  +LE  ANV TSLPFI LG+Q PRKNLN  +YANSL+GVG+ SSLYH+SRGKLRK
Sbjct:    73 IRGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVGIASSLYHASRGKLRK 132

Query:    92 YLRWADYAMIATATVCLSRALRDENPKMLMAASALALPIQPLMVSAVHTGMMEVAFAKRA 151
             YLRW DY MIAT T+CLSRALR+ENPK LMAASAL LP QPLMVSAVHTGMMEVAFAKR+
Sbjct:   133 YLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVSAVHTGMMEVAFAKRS 192

Query:   152 LNDPNLRMAHTVHKVSSLLGGVFFIADDVFPETPYLHAAWHLAAAVGVGTCNKLLE 207
             L DP+L+ AH VHK+SSLLGG  FIADD FPETP+LHA WHLAAA+GVGTCNKLLE
Sbjct:   193 LKDPDLKTAHNVHKMSSLLGGALFIADDFFPETPFLHAGWHLAAAIGVGTCNKLLE 248


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.135   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      207       207   0.00099  111 3  11 22  0.41    32
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  169 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.54u 0.10s 17.64t   Elapsed:  00:00:01
  Total cpu time:  17.54u 0.10s 17.64t   Elapsed:  00:00:01
  Start:  Sat May 11 01:43:15 2013   End:  Sat May 11 01:43:16 2013

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