Query 028566
Match_columns 207
No_of_seqs 260 out of 1243
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 13:31:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028566.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028566hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd00018 AP2 DNA-binding domain 99.8 6.2E-21 1.3E-25 133.5 7.1 61 95-156 1-61 (61)
2 smart00380 AP2 DNA-binding dom 99.8 4.7E-20 1E-24 130.6 8.3 62 96-158 1-62 (64)
3 PHA00280 putative NHN endonucl 99.6 8.3E-16 1.8E-20 122.7 7.9 78 69-150 41-119 (121)
4 PF00847 AP2: AP2 domain; Int 99.2 2.8E-11 6.2E-16 82.5 6.0 53 95-147 1-56 (56)
5 PF14657 Integrase_AP2: AP2-li 80.8 5.6 0.00012 26.1 5.1 38 107-144 1-41 (46)
6 PHA02601 int integrase; Provis 76.5 4.1 9E-05 35.7 4.5 45 99-144 2-46 (333)
7 cd00801 INT_P4 Bacteriophage P 57.9 23 0.00049 30.6 5.2 39 105-144 9-49 (357)
8 PF08846 DUF1816: Domain of un 54.8 25 0.00053 25.8 4.1 38 107-145 9-46 (68)
9 PF05036 SPOR: Sporulation rel 48.7 12 0.00025 25.5 1.5 23 119-141 43-65 (76)
10 PF08471 Ribonuc_red_2_N: Clas 41.2 29 0.00063 26.9 2.8 20 125-144 71-90 (93)
11 PRK09692 integrase; Provisiona 39.5 89 0.0019 28.6 6.3 43 100-142 33-80 (413)
12 PF14112 DUF4284: Domain of un 29.3 35 0.00076 27.0 1.6 17 120-136 2-18 (122)
13 PF13356 DUF4102: Domain of un 29.2 1.5E+02 0.0032 21.5 4.9 41 101-142 28-72 (89)
14 COG0197 RplP Ribosomal protein 24.7 1.1E+02 0.0024 25.5 3.8 36 108-147 96-131 (146)
15 PF07913 DUF1678: Protein of u 23.6 1.6E+02 0.0034 25.6 4.6 25 34-58 5-29 (201)
16 PF09954 DUF2188: Uncharacteri 20.3 2.7E+02 0.0059 18.9 4.6 39 100-143 3-41 (62)
No 1
>cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies.
Probab=99.84 E-value=6.2e-21 Score=133.46 Aligned_cols=61 Identities=70% Similarity=1.269 Sum_probs=56.3
Q ss_pred CceEEeEECCCCcEEEEEecCCCCCeEEecCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 028566 95 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDRAAFDIRGSKALLNFPHR 156 (207)
Q Consensus 95 S~yRGVr~r~~GKW~A~Ir~~~~~gkrv~LGtFdT~EeAA~AYD~AA~~~~G~~A~lNFp~~ 156 (207)
|+|+||+++++|||+|+|+++. .|+++|||+|+|+||||.|||.++++++|.++.+|||++
T Consensus 1 s~~~GV~~~~~gkw~A~I~~~~-~gk~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~ 61 (61)
T cd00018 1 SKYRGVRQRPWGKWVAEIRDPS-GGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFPDS 61 (61)
T ss_pred CCccCEEECCCCcEEEEEEeCC-CCceEccCCCCCHHHHHHHHHHHHHHhcCCccccCCCCC
Confidence 6899999888999999999763 268999999999999999999999999999999999974
No 2
>smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
Probab=99.82 E-value=4.7e-20 Score=130.59 Aligned_cols=62 Identities=71% Similarity=1.235 Sum_probs=57.1
Q ss_pred ceEEeEECCCCcEEEEEecCCCCCeEEecCCCCCHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 028566 96 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDRAAFDIRGSKALLNFPHRIG 158 (207)
Q Consensus 96 ~yRGVr~r~~GKW~A~Ir~~~~~gkrv~LGtFdT~EeAA~AYD~AA~~~~G~~A~lNFp~~~~ 158 (207)
+|+||+++++|||+|+|+++. +|+++|||+|+|+||||.|||.++++++|.++.+|||.+.+
T Consensus 1 ~~kGV~~~~~gkw~A~I~~~~-~~k~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~~y 62 (64)
T smart00380 1 KYRGVRQRPWGKWVAEIRDPS-KGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFPNSLY 62 (64)
T ss_pred CEeeEEeCCCCeEEEEEEecC-CCcEEecCCCCCHHHHHHHHHHHHHHhcCCccccCCCCccC
Confidence 599998888999999999763 57899999999999999999999999999999999998754
No 3
>PHA00280 putative NHN endonuclease
Probab=99.63 E-value=8.3e-16 Score=122.68 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=67.0
Q ss_pred cccccccccccccccccCccCCCCCCCceEEeE-ECCCCcEEEEEecCCCCCeEEecCCCCCHHHHHHHHHHHHHhhcCC
Q 028566 69 SVKAESVSDNYKNNNNINNQKMCRGGRHYRGVR-QRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDRAAFDIRGS 147 (207)
Q Consensus 69 ~~k~e~~~~~~~~~n~~n~~~~~~~~S~yRGVr-~r~~GKW~A~Ir~~~~~gkrv~LGtFdT~EeAA~AYD~AA~~~~G~ 147 (207)
..-++.+...+..+|+.|++..+.++|+|+||. ....|||+|+|+ .+|++++||.|+|+|+|+.||+ ++.++||+
T Consensus 41 dnri~NLr~~T~~eN~~N~~~~~~N~SG~kGV~~~k~~~kw~A~I~---~~gK~~~lG~f~~~e~A~~a~~-~~~~lhGe 116 (121)
T PHA00280 41 NDALDNLRLALPKENSWNMKTPKSNTSGLKGLSWSKEREMWRGTVT---AEGKQHNFRSRDLLEVVAWIYR-TRRELHGQ 116 (121)
T ss_pred CCcHHHhhhcCHHHHhcccCCCCCCCCCCCeeEEecCCCeEEEEEE---ECCEEEEcCCCCCHHHHHHHHH-HHHHHhhc
Confidence 344555666778888999888889999999995 556799999999 6799999999999999999997 77889999
Q ss_pred CCC
Q 028566 148 KAL 150 (207)
Q Consensus 148 ~A~ 150 (207)
+|.
T Consensus 117 Fa~ 119 (121)
T PHA00280 117 FAR 119 (121)
T ss_pred ccc
Confidence 985
No 4
>PF00847 AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-related genes transcriptional activator binds to the GCC-box pathogenesis-related promoter element and activates the plant's defence genes. Ethylene, chemically the simplest plant hormone, participates in a number of stress responses and developmental processes: e.g., fruit ripening, inhibition of stem and root elongation, promotion of seed germination and flowering, senescence of leaves and flowers, and sex determination []. DNA sequence elements that confer ethylene responsiveness have been shown to contain two 11bp GCC boxes, which are necessary and sufficient for transcriptional control by ethylene. Ethylene responsive element binding proteins (EREBPs) have now been identified in a variety of plants. The proteins share a similar domain of around 59 amino acids, which interacts directly with the GCC box in the ERE.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 3IGM_A 3GCC_A 1GCC_A 2GCC_A.
Probab=99.22 E-value=2.8e-11 Score=82.53 Aligned_cols=53 Identities=32% Similarity=0.481 Sum_probs=45.3
Q ss_pred CceEEeE-ECCCCcEEEEEecCCCCC--eEEecCCCCCHHHHHHHHHHHHHhhcCC
Q 028566 95 RHYRGVR-QRPWGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAFDIRGS 147 (207)
Q Consensus 95 S~yRGVr-~r~~GKW~A~Ir~~~~~g--krv~LGtFdT~EeAA~AYD~AA~~~~G~ 147 (207)
|+|+||+ .+..++|+|+|++...+| ++++||.|++++||++||+.++..++|+
T Consensus 1 s~~~GV~~~~~~~~W~a~i~~~~~~g~~k~f~~g~fg~~~eA~~~a~~~r~~~~~e 56 (56)
T PF00847_consen 1 SGYKGVSWDKRRGRWRAQIRVWSENGKRKRFSVGKFGFEEEAKRAAIEARKELEGE 56 (56)
T ss_dssp SSSTTEEEETTTTEEEEEEEECCCTTEEEEEEECCCCCHHHHHHHHHHHHHHCTS-
T ss_pred CCcEEEEEcCCCCEEEEEEEEcccCcccEEEeCccCCCHHHHHHHHHHHHHHhcCC
Confidence 6899996 455799999999853343 8999999999999999999999999874
No 5
>PF14657 Integrase_AP2: AP2-like DNA-binding integrase domain
Probab=80.84 E-value=5.6 Score=26.06 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=28.5
Q ss_pred cEEEEEe--cC-CCCCeEEecCCCCCHHHHHHHHHHHHHhh
Q 028566 107 KFAAEIR--DP-AKNGARVWLGTYETAEEAALAYDRAAFDI 144 (207)
Q Consensus 107 KW~A~Ir--~~-~~~gkrv~LGtFdT~EeAA~AYD~AA~~~ 144 (207)
+|..+|. ++ ..+.++++-+-|.|..||-.+.......+
T Consensus 1 ~w~~~v~g~~~~~Gkrk~~~k~GF~TkkeA~~~~~~~~~~~ 41 (46)
T PF14657_consen 1 TWYYRVYGYDDETGKRKQKTKRGFKTKKEAEKALAKIEAEL 41 (46)
T ss_pred CEEEEEEEEECCCCCEEEEEcCCCCcHHHHHHHHHHHHHHH
Confidence 5777773 33 33347788999999999999998876654
No 6
>PHA02601 int integrase; Provisional
Probab=76.51 E-value=4.1 Score=35.69 Aligned_cols=45 Identities=24% Similarity=0.322 Sum_probs=31.0
Q ss_pred EeEECCCCcEEEEEecCCCCCeEEecCCCCCHHHHHHHHHHHHHhh
Q 028566 99 GVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDRAAFDI 144 (207)
Q Consensus 99 GVr~r~~GKW~A~Ir~~~~~gkrv~LGtFdT~EeAA~AYD~AA~~~ 144 (207)
+|++.+.|+|.+++......|+++.. +|.|..||....+.....+
T Consensus 2 ~~~~~~~g~w~~~~~~~~~~g~r~~~-~f~tk~eA~~~~~~~~~~~ 46 (333)
T PHA02601 2 AVRKLKDGKWLCEIYPNGRDGKRIRK-RFATKGEALAFENYTMAEV 46 (333)
T ss_pred ceEEcCCCCEEEEEEECCCCCchhhh-hhcCHHHHHHHHHHHHHhc
Confidence 56677789999999853344666653 6999988876655544433
No 7
>cd00801 INT_P4 Bacteriophage P4 integrase. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. They share the same fold in their catalytic domain and the overall reaction mechanism with the superfamily of DNA breaking-rejoining enzymes. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes.
Probab=57.90 E-value=23 Score=30.61 Aligned_cols=39 Identities=26% Similarity=0.231 Sum_probs=27.7
Q ss_pred CCcEEEEEecCCCCCeEEecCCCC--CHHHHHHHHHHHHHhh
Q 028566 105 WGKFAAEIRDPAKNGARVWLGTYE--TAEEAALAYDRAAFDI 144 (207)
Q Consensus 105 ~GKW~A~Ir~~~~~gkrv~LGtFd--T~EeAA~AYD~AA~~~ 144 (207)
.+.|..+++..++. .++.||+|+ |.++|..........+
T Consensus 9 ~~~~~~~~~~~g~~-~~~~~g~~~~~~~~~A~~~~~~~~~~~ 49 (357)
T cd00801 9 SKSWRFRYRLAGKR-KRLTLGSYPAVSLAEAREKADEARALL 49 (357)
T ss_pred CEEEEEEeccCCce-eEEeCcCCCCCCHHHHHHHHHHHHHHH
Confidence 35799999876543 678899995 6777777666654444
No 8
>PF08846 DUF1816: Domain of unknown function (DUF1816); InterPro: IPR014945 Q4C9H3 from SWISSPROT is associated with the IPR008213 from INTERPRO domain suggesting this protein could have a role in phycobilisomes.
Probab=54.81 E-value=25 Score=25.77 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=27.8
Q ss_pred cEEEEEecCCCCCeEEecCCCCCHHHHHHHHHHHHHhhc
Q 028566 107 KFAAEIRDPAKNGARVWLGTYETAEEAALAYDRAAFDIR 145 (207)
Q Consensus 107 KW~A~Ir~~~~~gkrv~LGtFdT~EeAA~AYD~AA~~~~ 145 (207)
.|-++|.-..-+ -..|.|-|+|.+||..+.-.-...+.
T Consensus 9 aWWveI~T~~P~-ctYyFGPF~s~~eA~~~~~gyieDL~ 46 (68)
T PF08846_consen 9 AWWVEIETQNPN-CTYYFGPFDSREEAEAALPGYIEDLE 46 (68)
T ss_pred cEEEEEEcCCCC-EEEEeCCcCCHHHHHHHhccHHHHHH
Confidence 577999854333 67999999999999988654444443
No 9
>PF05036 SPOR: Sporulation related domain; InterPro: IPR007730 This 70 residue domain is composed of two 35 residue repeats that are found in bacterial proteins involved in sporulation and cell division, such as FtsN, CwlM and RlpA. This repeat might be involved in binding peptidoglycan. FtsN is an essential cell division protein with a simple bitopic topology: a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. The repeats lie at the periplasmic C terminus, which has an RNP-like fold []. FtsN localises to the septum ring complex. The CwlM protein is a cell wall hydrolase, where the C-terminal region, including the repeats, determines substrate specificity []. RlpA is a rare lipoprotein A protein that may be important for cell division. Its N-terminal cysteine may be attached to thioglyceride and N-fatty acyl residues [].; PDB: 1X60_A 1UTA_A.
Probab=48.65 E-value=12 Score=25.46 Aligned_cols=23 Identities=30% Similarity=0.387 Sum_probs=19.2
Q ss_pred CeEEecCCCCCHHHHHHHHHHHH
Q 028566 119 GARVWLGTYETAEEAALAYDRAA 141 (207)
Q Consensus 119 gkrv~LGtFdT~EeAA~AYD~AA 141 (207)
..+|.+|.|+|.++|..+-.+..
T Consensus 43 ~yrV~~G~f~~~~~A~~~~~~l~ 65 (76)
T PF05036_consen 43 WYRVRVGPFSSREEAEAALRKLK 65 (76)
T ss_dssp CEEEEECCECTCCHHHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHh
Confidence 46799999999999988877655
No 10
>PF08471 Ribonuc_red_2_N: Class II vitamin B12-dependent ribonucleotide reductase; InterPro: IPR013678 This domain is found to the N terminus of the ribonucleotide reductase barrel domain (IPR000788 from INTERPRO). It occurs in bacterial class II ribonucleotide reductase proteins which depend upon coenzyme B12 (deoxyadenosylcobalamine) []. ; GO: 0004748 ribonucleoside-diphosphate reductase activity, 0050897 cobalt ion binding, 0055114 oxidation-reduction process
Probab=41.17 E-value=29 Score=26.94 Aligned_cols=20 Identities=30% Similarity=0.579 Sum_probs=17.9
Q ss_pred CCCCCHHHHHHHHHHHHHhh
Q 028566 125 GTYETAEEAALAYDRAAFDI 144 (207)
Q Consensus 125 GtFdT~EeAA~AYD~AA~~~ 144 (207)
|+|+|+|+|..=||..+..|
T Consensus 71 GYF~t~eDA~~FydEl~~mL 90 (93)
T PF08471_consen 71 GYFATEEDAEAFYDELTYML 90 (93)
T ss_pred CCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999987654
No 11
>PRK09692 integrase; Provisional
Probab=39.55 E-value=89 Score=28.57 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=26.0
Q ss_pred eEECCCC--cEEEEEecC-CCCCeEEecCCCC--CHHHHHHHHHHHHH
Q 028566 100 VRQRPWG--KFAAEIRDP-AKNGARVWLGTYE--TAEEAALAYDRAAF 142 (207)
Q Consensus 100 Vr~r~~G--KW~A~Ir~~-~~~gkrv~LGtFd--T~EeAA~AYD~AA~ 142 (207)
|+-++.| .|..+.+.+ ..+.+++-||.|. |..+|..+..++..
T Consensus 33 l~v~~~G~k~~~~rY~~~~~gk~~~~~lG~yp~~sl~~AR~~a~~~~~ 80 (413)
T PRK09692 33 LLIKSSGSKIWQFRYYRPLTKTRAKKSFGPYPSVTLADARNYRAESRS 80 (413)
T ss_pred EEEECCCcEEEEEEEecCCCCceeeeeCCCCCCCCHHHHHHHHHHHHH
Confidence 3444554 599988754 2222447899999 67666555544433
No 12
>PF14112 DUF4284: Domain of unknown function (DUF4284)
Probab=29.31 E-value=35 Score=26.98 Aligned_cols=17 Identities=18% Similarity=0.687 Sum_probs=13.1
Q ss_pred eEEecCCCCCHHHHHHH
Q 028566 120 ARVWLGTYETAEEAALA 136 (207)
Q Consensus 120 krv~LGtFdT~EeAA~A 136 (207)
..||||+|.|.++-..=
T Consensus 2 VsiWiG~f~s~~el~~Y 18 (122)
T PF14112_consen 2 VSIWIGNFKSEDELEEY 18 (122)
T ss_pred eEEEEecCCCHHHHHHH
Confidence 45999999988775543
No 13
>PF13356 DUF4102: Domain of unknown function (DUF4102); PDB: 3JU0_A 3RMP_A 3JTZ_A 2KJ8_A.
Probab=29.23 E-value=1.5e+02 Score=21.50 Aligned_cols=41 Identities=29% Similarity=0.286 Sum_probs=24.7
Q ss_pred EECCCC--cEEEEEecCCCCCeEEecCCCCC--HHHHHHHHHHHHH
Q 028566 101 RQRPWG--KFAAEIRDPAKNGARVWLGTYET--AEEAALAYDRAAF 142 (207)
Q Consensus 101 r~r~~G--KW~A~Ir~~~~~gkrv~LGtFdT--~EeAA~AYD~AA~ 142 (207)
+-.+.| .|..+.+..++ .+++-||.|.+ ..+|.........
T Consensus 28 ~v~~~G~kt~~~r~~~~gk-~~~~~lG~~p~~sl~~AR~~a~~~~~ 72 (89)
T PF13356_consen 28 RVTPSGSKTFYFRYRINGK-RRRITLGRYPELSLAEAREKARELRA 72 (89)
T ss_dssp EE-TTS-EEEEEEEEETTE-EEEEEEEECTTS-HHHHHHHHHHHHH
T ss_pred EEEeCCCeEEEEEEEecce-EEEeccCCCccCCHHHHHHHHHHHHH
Confidence 344443 58888875533 36788999975 5555555444433
No 14
>COG0197 RplP Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis]
Probab=24.71 E-value=1.1e+02 Score=25.54 Aligned_cols=36 Identities=25% Similarity=0.177 Sum_probs=29.9
Q ss_pred EEEEEecCCCCCeEEecCCCCCHHHHHHHHHHHHHhhcCC
Q 028566 108 FAAEIRDPAKNGARVWLGTYETAEEAALAYDRAAFDIRGS 147 (207)
Q Consensus 108 W~A~Ir~~~~~gkrv~LGtFdT~EeAA~AYD~AA~~~~G~ 147 (207)
|+|+|. -|+-++-=..++++.|..|..+|+.+|=+.
T Consensus 96 waArVk----pG~vlfei~g~~e~~A~EAlr~Aa~KLP~~ 131 (146)
T COG0197 96 WAARVK----PGRVLFEIAGVPEELAREALRRAAAKLPVK 131 (146)
T ss_pred EEEEec----CCcEEEEEecCcHHHHHHHHHHHhhcCCCc
Confidence 999997 367788777888899999999999887554
No 15
>PF07913 DUF1678: Protein of unknown function (DUF1678); InterPro: IPR012465 This family is composed of uncharacterised proteins expressed by Methanopyrus kandleri, a hyperthermophilic archaeon.
Probab=23.57 E-value=1.6e+02 Score=25.56 Aligned_cols=25 Identities=16% Similarity=0.343 Sum_probs=17.8
Q ss_pred CCCCCCCCchhHHHHHhhhhhhcCC
Q 028566 34 DLPLRVNDSEDMIIFNYLYDAVNSG 58 (207)
Q Consensus 34 ~lp~~~~ds~dm~~~~~l~~a~~~~ 58 (207)
..|...|..|.+-.+.+|.+...-|
T Consensus 5 ~vPiP~dPVEriR~lRVLrE~~rRg 29 (201)
T PF07913_consen 5 HVPIPSDPVERIRALRVLREVYRRG 29 (201)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcc
Confidence 3566677788887888888766544
No 16
>PF09954 DUF2188: Uncharacterized protein conserved in bacteria (DUF2188); InterPro: IPR018691 This family has no known function.
Probab=20.27 E-value=2.7e+02 Score=18.90 Aligned_cols=39 Identities=28% Similarity=0.198 Sum_probs=25.1
Q ss_pred eEECCCCcEEEEEecCCCCCeEEecCCCCCHHHHHHHHHHHHHh
Q 028566 100 VRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDRAAFD 143 (207)
Q Consensus 100 Vr~r~~GKW~A~Ir~~~~~gkrv~LGtFdT~EeAA~AYD~AA~~ 143 (207)
|..+..|.|..+... ..--..+|+|.+||-.+=...|..
T Consensus 3 V~p~~~~~W~v~~eg-----~~ra~~~~~Tk~eAi~~Ar~~a~~ 41 (62)
T PF09954_consen 3 VVPREDGGWAVKKEG-----AKRASKTFDTKAEAIEAARELAKN 41 (62)
T ss_pred EEecCCCCceEEeCC-----CcccccccCcHHHHHHHHHHHHHh
Confidence 333456789988762 222369999999887665444443
Done!