Query 028571
Match_columns 207
No_of_seqs 316 out of 1748
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 22:48:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.9 3.8E-22 1.3E-26 139.4 8.5 71 72-145 3-73 (77)
2 2ctw_A DNAJ homolog subfamily 99.9 9.5E-22 3.2E-26 146.4 10.6 76 69-146 14-89 (109)
3 2ej7_A HCG3 gene; HCG3 protein 99.9 5.4E-22 1.9E-26 140.1 8.5 74 70-144 7-80 (82)
4 2dn9_A DNAJ homolog subfamily 99.9 4.1E-22 1.4E-26 139.8 7.3 72 70-143 5-76 (79)
5 2ctp_A DNAJ homolog subfamily 99.9 9.1E-22 3.1E-26 137.8 7.6 71 70-143 5-75 (78)
6 2yua_A Williams-beuren syndrom 99.9 1.6E-21 5.5E-26 142.6 8.9 71 69-141 14-84 (99)
7 2ctq_A DNAJ homolog subfamily 99.9 7.5E-22 2.6E-26 147.5 7.2 76 69-146 17-92 (112)
8 2ctr_A DNAJ homolog subfamily 99.9 1.1E-21 3.7E-26 140.6 7.6 73 70-145 5-77 (88)
9 2cug_A Mkiaa0962 protein; DNAJ 99.8 2E-21 6.7E-26 139.3 8.5 70 70-142 15-84 (88)
10 1wjz_A 1700030A21RIK protein; 99.8 1.5E-21 5.1E-26 141.2 7.3 73 69-141 13-89 (94)
11 2lgw_A DNAJ homolog subfamily 99.8 2.2E-21 7.4E-26 142.1 8.0 74 72-146 2-75 (99)
12 2och_A Hypothetical protein DN 99.8 3E-21 1E-25 133.6 8.2 67 70-141 6-72 (73)
13 2dmx_A DNAJ homolog subfamily 99.8 2.4E-21 8.2E-26 139.8 7.6 75 70-145 7-81 (92)
14 3hho_A CO-chaperone protein HS 99.8 2.2E-21 7.7E-26 155.5 7.7 102 71-178 3-109 (174)
15 3bvo_A CO-chaperone protein HS 99.8 6.6E-21 2.3E-25 156.7 9.3 76 70-146 41-121 (207)
16 2o37_A Protein SIS1; HSP40, J- 99.8 7.1E-21 2.4E-25 137.4 7.7 71 70-145 6-76 (92)
17 1fpo_A HSC20, chaperone protei 99.8 6.6E-21 2.3E-25 152.4 7.4 102 72-179 1-107 (171)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 6.8E-21 2.3E-25 141.6 6.9 72 70-141 13-86 (109)
19 1bq0_A DNAJ, HSP40; chaperone, 99.8 2.2E-21 7.6E-26 142.8 2.9 73 71-145 2-74 (103)
20 2l6l_A DNAJ homolog subfamily 99.8 1.2E-19 4.3E-24 142.6 8.6 73 69-141 7-83 (155)
21 3uo3_A J-type CO-chaperone JAC 99.8 2.3E-20 7.8E-25 150.5 2.9 99 69-177 8-117 (181)
22 3apq_A DNAJ homolog subfamily 99.8 1.7E-19 5.7E-24 146.8 7.0 72 72-145 2-73 (210)
23 1gh6_A Large T antigen; tumor 99.8 3.2E-20 1.1E-24 139.2 -0.6 64 71-140 7-72 (114)
24 2ys8_A RAB-related GTP-binding 99.8 5E-19 1.7E-23 127.3 4.6 62 70-134 25-86 (90)
25 1faf_A Large T antigen; J doma 99.7 5.5E-19 1.9E-23 124.2 1.8 65 70-141 9-75 (79)
26 2pf4_E Small T antigen; PP2A, 99.7 3E-19 1E-23 142.7 -1.1 66 70-141 9-76 (174)
27 1iur_A KIAA0730 protein; DNAJ 99.7 2.9E-18 9.8E-23 122.9 2.7 64 69-133 13-76 (88)
28 3lz8_A Putative chaperone DNAJ 99.7 1E-18 3.5E-23 152.7 0.0 70 70-142 26-95 (329)
29 1n4c_A Auxilin; four helix bun 99.7 7.9E-18 2.7E-22 135.4 1.2 65 72-136 117-182 (182)
30 2qwo_B Putative tyrosine-prote 99.6 4.8E-17 1.6E-21 117.3 2.5 58 72-129 33-91 (92)
31 2guz_A Mitochondrial import in 99.6 4E-17 1.4E-21 112.3 1.9 57 71-133 13-70 (71)
32 3ag7_A Putative uncharacterize 99.6 4.4E-17 1.5E-21 120.6 1.5 61 70-131 39-104 (106)
33 3apo_A DNAJ homolog subfamily 99.6 8E-17 2.7E-21 153.6 0.3 76 70-147 19-94 (780)
34 2y4t_A DNAJ homolog subfamily 99.1 4.1E-11 1.4E-15 103.9 5.3 68 71-138 381-449 (450)
35 2guz_B Mitochondrial import in 99.0 6E-10 2.1E-14 75.0 4.5 51 73-129 5-58 (65)
36 2pzi_A Probable serine/threoni 89.5 0.2 6.8E-06 46.6 3.3 48 69-126 626-675 (681)
37 2cqn_A Formin-binding protein 59.6 34 0.0012 22.7 6.4 57 84-141 6-63 (77)
38 2b7e_A PRE-mRNA processing pro 41.1 67 0.0023 20.4 5.6 50 87-141 3-57 (59)
39 1qqr_A Streptokinase domain B; 29.3 24 0.00083 26.3 1.8 30 74-103 34-63 (138)
40 1uzc_A Hypothetical protein FL 23.0 1.4E+02 0.0049 19.3 4.6 54 83-141 11-67 (71)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.87 E-value=3.8e-22 Score=139.39 Aligned_cols=71 Identities=38% Similarity=0.655 Sum_probs=65.4
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhccc
Q 028571 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (207)
Q Consensus 72 ~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (207)
.|||+||||+++++.++||++|+++++++|||+++.. .+.+.|+.|++||++|+||.+|..||.++..|+.
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP---GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT---THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 5899999999999999999999999999999998764 3568999999999999999999999999977654
No 2
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=9.5e-22 Score=146.36 Aligned_cols=76 Identities=33% Similarity=0.619 Sum_probs=68.7
Q ss_pred CcccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhcccc
Q 028571 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (207)
Q Consensus 69 ~~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (207)
....|||+||||+++|+.++||++|++|++++|||+++.. ..+.+.|++|++||+||+||.+|..||.++..++..
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~~ 89 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN--PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYV 89 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC--HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccccc
Confidence 3467999999999999999999999999999999999764 467899999999999999999999999998776543
No 3
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=5.4e-22 Score=140.14 Aligned_cols=74 Identities=42% Similarity=0.663 Sum_probs=67.1
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhcc
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGL 144 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~ 144 (207)
...|||+||||+++++.++||++|+++++++|||+++.. .+.+.+.|+.|++||++|+||.+|..||.++..++
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN-KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT-HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 457999999999999999999999999999999998754 35678999999999999999999999999986554
No 4
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=4.1e-22 Score=139.82 Aligned_cols=72 Identities=42% Similarity=0.636 Sum_probs=65.3
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhc
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMG 143 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~ 143 (207)
...|||+||||+++++.++||++|+++++++|||+++.. +.+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD--PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC--TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 467999999999999999999999999999999998754 246789999999999999999999999988543
No 5
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=9.1e-22 Score=137.78 Aligned_cols=71 Identities=32% Similarity=0.532 Sum_probs=65.1
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhc
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMG 143 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~ 143 (207)
...|||+||||+++++.++||++|+++++++|||+++.. .+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP---GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH---HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 467999999999999999999999999999999998753 56789999999999999999999999988643
No 6
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.6e-21 Score=142.64 Aligned_cols=71 Identities=38% Similarity=0.652 Sum_probs=64.8
Q ss_pred CcccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 69 ~~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
....|||+||||+++++.++||++|++|+++||||+++.. ..+.+.|++|++||+||+||.+|..||..+.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS--AEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC--SHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4568999999999999999999999999999999999754 3567899999999999999999999999764
No 7
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=7.5e-22 Score=147.55 Aligned_cols=76 Identities=29% Similarity=0.421 Sum_probs=68.6
Q ss_pred CcccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhcccc
Q 028571 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (207)
Q Consensus 69 ~~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (207)
....|||+||||+++|+.++||+||++|+++||||+++... .+.+.|++|++||+||+||.+|..||.++..++..
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~ 92 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENP--KAVETFQKLQKAKEILTNEESRARYDHWRRSQMSM 92 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCS--THHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCSS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH--HHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccCC
Confidence 45689999999999999999999999999999999997542 56799999999999999999999999999876653
No 8
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=140.57 Aligned_cols=73 Identities=40% Similarity=0.631 Sum_probs=66.7
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhccc
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (207)
...|||+||||+++++.++||++|++|++++|||+++. ..+.+.|+.|++||++|+||.+|..||.++..++.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS---PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS---HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC---hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 46799999999999999999999999999999999974 36779999999999999999999999999876544
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=2e-21 Score=139.25 Aligned_cols=70 Identities=37% Similarity=0.605 Sum_probs=64.5
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchh
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSM 142 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~ 142 (207)
...|||+||||+++++.++||++|+++++++|||+++.. .+.+.|++|++||++|+||.+|..||.++..
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP---GAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST---THHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh---hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 467999999999999999999999999999999998764 4568999999999999999999999998854
No 10
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.85 E-value=1.5e-21 Score=141.21 Aligned_cols=73 Identities=30% Similarity=0.591 Sum_probs=65.9
Q ss_pred CcccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----hHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPD----RVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 69 ~~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
....|||+||||+++++.++||++|++|+++||||+++.. ....+.+.|++|++||+||+||.+|+.||..+.
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4578999999999999999999999999999999998632 235678999999999999999999999999874
No 11
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.85 E-value=2.2e-21 Score=142.12 Aligned_cols=74 Identities=42% Similarity=0.676 Sum_probs=65.1
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhcccc
Q 028571 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (207)
Q Consensus 72 ~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (207)
.|||+||||+++++.++||++|+++++++|||+++... +.+.+.|+.|++||++|+||.+|..||.++..++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~-~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNK-EFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCC-HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 48999999999999999999999999999999987653 467899999999999999999999999998776653
No 12
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.85 E-value=3e-21 Score=133.57 Aligned_cols=67 Identities=42% Similarity=0.750 Sum_probs=61.5
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
...|||+||||+++++.++||++|+++++++|||+++.. .+.|+.|++||++|+||.+|..||.+|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~-----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG-----AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC-----HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH-----HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 467999999999999999999999999999999998754 2689999999999999999999999874
No 13
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=2.4e-21 Score=139.79 Aligned_cols=75 Identities=40% Similarity=0.682 Sum_probs=67.5
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhccc
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (207)
...|||+||||+++++.++||++|++|+++||||+++... +.+.+.|+.|++||++|+||.+|..||..+..++.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 81 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNK-EEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR 81 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCS-HHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 4579999999999999999999999999999999987543 46789999999999999999999999999866543
No 14
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.84 E-value=2.2e-21 Score=155.54 Aligned_cols=102 Identities=20% Similarity=0.387 Sum_probs=76.7
Q ss_pred ccchhhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchH---HHHHHHHHHHHHHHHHcCChhHHHHHHHhchhccc
Q 028571 71 ELSFYDLLGIPESVS--LVEIKQAYKQMARKYHPDVSPPDRV---EEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (207)
Q Consensus 71 ~~~~Y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~~---~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (207)
..|||+||||+++++ .++||++|++++++||||+++.... ..|.+.|..|++||+||+||.+|+.||..+. |..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~-g~~ 81 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ-GIE 81 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT-TCC
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc-CCC
Confidence 579999999999987 9999999999999999999866543 2377999999999999999999999999875 555
Q ss_pred chhhhcccccCCccccchhHHHHHHHHHHHHHH
Q 028571 146 LAFSARRRQQNDVDFQVRSEWRNRWQSQLSELK 178 (207)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 178 (207)
.........+..+.|+ .+.|++.++++.
T Consensus 82 ~~~e~~~~~d~~fLme-----~me~rE~le~~~ 109 (174)
T 3hho_A 82 MNAEQQTLQDPMFLME-----QMELREELESVT 109 (174)
T ss_dssp CC----CCCCHHHHHH-----HHHHHHHHHHHT
T ss_pred cccccCCCCCHHHHHH-----HHHHHHHHHHHh
Confidence 4433222222222222 257888877764
No 15
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.83 E-value=6.6e-21 Score=156.68 Aligned_cols=76 Identities=26% Similarity=0.434 Sum_probs=65.5
Q ss_pred cccchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhcc
Q 028571 70 KELSFYDLLGIPES--VSLVEIKQAYKQMARKYHPDVSPPDR---VEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGL 144 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~---~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~ 144 (207)
...|||+||||+++ ++.++||++||+|+++||||+++... +..|.+.|+.|++||+||+||.+|+.||..+. |.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~-G~ 119 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH-GI 119 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT-TC
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc-CC
Confidence 46799999999987 79999999999999999999986542 34577899999999999999999999998764 44
Q ss_pred cc
Q 028571 145 HL 146 (207)
Q Consensus 145 ~~ 146 (207)
..
T Consensus 120 ~~ 121 (207)
T 3bvo_A 120 EI 121 (207)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 16
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.83 E-value=7.1e-21 Score=137.43 Aligned_cols=71 Identities=41% Similarity=0.680 Sum_probs=64.7
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhccc
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (207)
...|||+||||+++++.++||++|++|++++|||+++.. .+.|++|++||+||+||.+|..||.++..++.
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD-----TEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC-----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh-----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 457999999999999999999999999999999999755 25899999999999999999999999876654
No 17
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.83 E-value=6.6e-21 Score=152.41 Aligned_cols=102 Identities=22% Similarity=0.429 Sum_probs=77.3
Q ss_pred cchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhcccc
Q 028571 72 LSFYDLLGIPESV--SLVEIKQAYKQMARKYHPDVSPPDR---VEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHL 146 (207)
Q Consensus 72 ~~~Y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~---~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~ 146 (207)
.|||+||||++++ +..+||++|++|+++||||+++... ...|.+.|..|++||+||+||.+|+.||..+. |...
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~-g~~~ 79 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH-GFDL 79 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT-TCCT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc-CCCc
Confidence 3899999999999 9999999999999999999986543 23577899999999999999999999999875 4443
Q ss_pred hhhhcccccCCccccchhHHHHHHHHHHHHHHH
Q 028571 147 AFSARRRQQNDVDFQVRSEWRNRWQSQLSELKR 179 (207)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 179 (207)
........+..+.|. .+.|++.++++..
T Consensus 80 ~~e~~~~~d~~fLme-----~me~rE~lee~~~ 107 (171)
T 1fpo_A 80 ASEQHTVRDTAFLME-----QLELREELDEIEQ 107 (171)
T ss_dssp TCSSSCCSCHHHHHH-----HHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHH-----HHHHHHHHHHhhc
Confidence 222111111111111 3688888887754
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.83 E-value=6.8e-21 Score=141.55 Aligned_cols=72 Identities=31% Similarity=0.425 Sum_probs=66.0
Q ss_pred cccchhhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 70 KELSFYDLLGIPESV-SLVEIKQAYKQMARKYHPDVSPP-DRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~a-s~~eIk~ayr~l~~~~HPDk~~~-~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
...|||+||||+++| +.++||+||+++++++|||+++. ...+.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 467999999999999 99999999999999999999875 3446788999999999999999999999999874
No 19
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.82 E-value=2.2e-21 Score=142.84 Aligned_cols=73 Identities=37% Similarity=0.670 Sum_probs=66.4
Q ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhccc
Q 028571 71 ELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (207)
Q Consensus 71 ~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (207)
..|||+||||+++++.++||++|++|++++|||+++.. ..+.+.|++|++||+||+||.+|..||.++..++.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD--KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT--CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 36899999999999999999999999999999998753 24668999999999999999999999999987765
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=142.56 Aligned_cols=73 Identities=30% Similarity=0.584 Sum_probs=65.6
Q ss_pred CcccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc----hHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPD----RVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 69 ~~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
....|||+||||+++++.++||+||++|++++|||+++.. ..+.|.+.|+.|++||+||+||.+|+.||..+.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3467999999999999999999999999999999998654 234578999999999999999999999998774
No 21
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.79 E-value=2.3e-20 Score=150.53 Aligned_cols=99 Identities=22% Similarity=0.403 Sum_probs=75.9
Q ss_pred Ccccchhhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 69 SKELSFYDLL------GIPE-SVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 69 ~~~~~~Y~iL------gv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
....|||+|| |+++ +++.++||++||+|+++||||+++. +.+.|+.|++||+||+||.+|+.||..+.
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~ 82 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ-----GSEQSSTLNQAYHTLKDPLRRSQYMLKLL 82 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS-----CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc-----HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 3467999999 4665 8999999999999999999999875 34789999999999999999999999885
Q ss_pred hcccchhhh----cccccCCccccchhHHHHHHHHHHHHH
Q 028571 142 MGLHLAFSA----RRRQQNDVDFQVRSEWRNRWQSQLSEL 177 (207)
Q Consensus 142 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~e~ 177 (207)
.|+...... ....+.++.|+. +.|++.++++
T Consensus 83 ~g~~~~~e~~~~~~~~~d~~fLme~-----me~rE~leea 117 (181)
T 3uo3_A 83 RNIDLTQEQTSNEVTTSDPQLLLKV-----LDIHDELSQM 117 (181)
T ss_dssp HCCCTTSHHHHHHHHHTCHHHHHHH-----HHHHHHHHHC
T ss_pred hCCCccccccccccccCCHHHHHHH-----HHHHHHHHhc
Confidence 566654432 122222333322 5788877765
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.78 E-value=1.7e-19 Score=146.77 Aligned_cols=72 Identities=40% Similarity=0.699 Sum_probs=66.0
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhccc
Q 028571 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLH 145 (207)
Q Consensus 72 ~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~ 145 (207)
.|||+||||+++|+.++||+|||++++++|||+++.. .++.++|+.|++||++|+||.+|+.||.++..++.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~--~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC--TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 5899999999999999999999999999999999654 35678999999999999999999999999977655
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.76 E-value=3.2e-20 Score=139.17 Aligned_cols=64 Identities=22% Similarity=0.337 Sum_probs=59.4
Q ss_pred ccchhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhc
Q 028571 71 ELSFYDLLGIPESVSL--VEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDL 140 (207)
Q Consensus 71 ~~~~Y~iLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~ 140 (207)
..+||+||||+++++. ++||+|||+|++++|||+++.. ++|++|++||+||+||.+|+.||.++
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~------e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT------TTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccH------HHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 4689999999999999 9999999999999999998763 68999999999999999999999765
No 24
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5e-19 Score=127.27 Aligned_cols=62 Identities=24% Similarity=0.315 Sum_probs=56.4
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHH
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRA 134 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~ 134 (207)
...|||+||||+++++.++||++|++|+++||||+++.. .+.+.|++|++||++|+||.+|+
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP---GSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT---THHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCccccc
Confidence 358999999999999999999999999999999999764 35588999999999999998875
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.73 E-value=5.5e-19 Score=124.18 Aligned_cols=65 Identities=18% Similarity=0.231 Sum_probs=57.2
Q ss_pred cccchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 70 KELSFYDLLGIPES--VSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
...++|+||||+++ ++.++||++||+|++++|||+++.. +.|++|++||++|+|+.+|..+ .++.
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~------~~f~~i~~AYe~L~~~~~r~~~-~~g~ 75 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH------ALMQELNSLWGTFKTEVYNLRM-NLGG 75 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCH------HHHHHHHHHHHHHHHHHHHHTT-CCSS
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH------HHHHHHHHHHHHHhhHHHHHHH-hcCC
Confidence 34689999999999 9999999999999999999998642 6899999999999999999873 3443
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.71 E-value=3e-19 Score=142.72 Aligned_cols=66 Identities=21% Similarity=0.371 Sum_probs=58.3
Q ss_pred cccchhhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhch
Q 028571 70 KELSFYDLLGIPESVS--LVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLS 141 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~ 141 (207)
...|||+||||+++|+ .++||+|||++++++|||+++.. ++|++|++||+||+||.+|+.||.+|.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~------e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC------TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH------HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 4579999999999998 69999999999999999998764 679999999999999999999999884
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.70 E-value=2.9e-18 Score=122.90 Aligned_cols=64 Identities=17% Similarity=0.236 Sum_probs=57.2
Q ss_pred CcccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHH
Q 028571 69 SKELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLR 133 (207)
Q Consensus 69 ~~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R 133 (207)
....++|+||||+++|+.++||+||++|+++||||+++... +.+.+.|++|++||++|+|...|
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~-~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENH-DIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCH-HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch-HHHHHHHHHHHHHHHHHHhhccc
Confidence 34578999999999999999999999999999999997653 56789999999999999987655
No 28
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.70 E-value=1e-18 Score=152.72 Aligned_cols=70 Identities=39% Similarity=0.640 Sum_probs=0.0
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchh
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSM 142 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~ 142 (207)
...|||+||||+++|+.++||+|||+|+++||||+++.. .|.++|++|++||++|+||.+|+.||.++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN---DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh---HHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 457999999999999999999999999999999998754 5678999999999999999999999998543
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.67 E-value=7.9e-18 Score=135.35 Aligned_cols=65 Identities=18% Similarity=0.414 Sum_probs=58.5
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchH-HHHHHHHHHHHHHHHHcCChhHHHHH
Q 028571 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRV-EEYTQRFIRVQEAYETLSDPGLRALY 136 (207)
Q Consensus 72 ~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~-~~a~~~f~~I~~Ay~vLsdp~~R~~Y 136 (207)
.|||+||||+++|+.++||+|||+++++||||+++.... ..|.+.|+.|++||+||+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 689999999999999999999999999999999865432 24789999999999999999999866
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.64 E-value=4.8e-17 Score=117.25 Aligned_cols=58 Identities=14% Similarity=0.301 Sum_probs=51.7
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHHHHcCC
Q 028571 72 LSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDR-VEEYTQRFIRVQEAYETLSD 129 (207)
Q Consensus 72 ~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~~~a~~~f~~I~~Ay~vLsd 129 (207)
.++|++|||++.|+.++||+|||+++++|||||+++.. ...|.+.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999987543 23578899999999999964
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.64 E-value=4e-17 Score=112.31 Aligned_cols=57 Identities=18% Similarity=0.304 Sum_probs=50.6
Q ss_pred ccchhhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHH
Q 028571 71 ELSFYDLLGIPE-SVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLR 133 (207)
Q Consensus 71 ~~~~Y~iLgv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R 133 (207)
..++|+||||++ +++.++||++|++|++++|||+++.. +.|++|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~------~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP------FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH------HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH------HHHHHHHHHHHHHhhhhhc
Confidence 468999999999 79999999999999999999997543 5899999999999987544
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.63 E-value=4.4e-17 Score=120.56 Aligned_cols=61 Identities=15% Similarity=0.200 Sum_probs=52.8
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHHHHHHHHHHcCChh
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPD-----RVEEYTQRFIRVQEAYETLSDPG 131 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-----~~~~a~~~f~~I~~Ay~vLsdp~ 131 (207)
...|||+|||++. |+.++||+|||+++++|||||++.. ....|.++|+.|++||++|+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3579999999996 9999999999999999999997531 22357899999999999999985
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.60 E-value=8e-17 Score=153.60 Aligned_cols=76 Identities=38% Similarity=0.658 Sum_probs=40.8
Q ss_pred cccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCChhHHHHHHHhchhcccch
Q 028571 70 KELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSDPGLRALYDRDLSMGLHLA 147 (207)
Q Consensus 70 ~~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~~~~~~~~~~ 147 (207)
...|||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|++|++||++|+||.+|+.||.+|..|+...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~--~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 467999999999999999999999999999999998654 3577899999999999999999999999998766543
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.12 E-value=4.1e-11 Score=103.93 Aligned_cols=68 Identities=31% Similarity=0.610 Sum_probs=57.5
Q ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-HHHHHHHHHHHHHHHHHcCChhHHHHHHH
Q 028571 71 ELSFYDLLGIPESVSLVEIKQAYKQMARKYHPDVSPPDR-VEEYTQRFIRVQEAYETLSDPGLRALYDR 138 (207)
Q Consensus 71 ~~~~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~~~a~~~f~~I~~Ay~vLsdp~~R~~YD~ 138 (207)
..++|.+||+...++.++|+++|+++++.+|||+.+.+. +..+.+.|+.|.+||++|+||.+|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 458999999999999999999999999999999987643 45688999999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.95 E-value=6e-10 Score=74.97 Aligned_cols=51 Identities=18% Similarity=0.127 Sum_probs=45.2
Q ss_pred chhhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCC
Q 028571 73 SFYDLLGIPES---VSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSD 129 (207)
Q Consensus 73 ~~Y~iLgv~~~---as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsd 129 (207)
.-|.||||+++ ++.++|+++|++|...+|||+.+.. .....|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~------yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF------YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH------HHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH------HHHHHHHHHHHHHHH
Confidence 45899999999 9999999999999999999998665 467889999999853
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.52 E-value=0.2 Score=46.62 Aligned_cols=48 Identities=19% Similarity=0.292 Sum_probs=37.3
Q ss_pred CcccchhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHH
Q 028571 69 SKELSFYDLLGIPESVSL--VEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYET 126 (207)
Q Consensus 69 ~~~~~~Y~iLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~v 126 (207)
....+||.|||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----------HHHHHHHHHhccc
Confidence 345569999999776555 67999999999976554 1578888888876
No 37
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=59.58 E-value=34 Score=22.74 Aligned_cols=57 Identities=16% Similarity=0.336 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHhch
Q 028571 84 VSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQEAYETLSD-PGLRALYDRDLS 141 (207)
Q Consensus 84 as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~~Ay~vLsd-p~~R~~YD~~~~ 141 (207)
.-...++.+|+.+.+...|.......=+.+...|.... +|..|.+ ..++.+|+.+..
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHH
Confidence 34677899999999999887665554466667776655 7999977 467777777763
No 38
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=41.10 E-value=67 Score=20.35 Aligned_cols=50 Identities=16% Similarity=0.282 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHH---HHHHHHcCC-hh-HHHHHHHhch
Q 028571 87 VEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRV---QEAYETLSD-PG-LRALYDRDLS 141 (207)
Q Consensus 87 ~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I---~~Ay~vLsd-p~-~R~~YD~~~~ 141 (207)
+|..++|.+|.+...-|-.=.- + +..+.| ..-|.+|.| |. ++..|+.++.
T Consensus 3 eEae~aF~~lL~~~~V~s~wsw--e---qamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~~ 57 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSF--S---RIISELGTRDPRYWMVDDDPLWKKEMFEKYLS 57 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCH--H---HHHHHHHHHCTHHHHSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcH--H---HHHHHhccCCCccccccCCHHHHHHHHHHHHh
Confidence 5678999999998865544333 2 334444 457999997 65 7778888763
No 39
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=29.33 E-value=24 Score=26.28 Aligned_cols=30 Identities=20% Similarity=0.377 Sum_probs=27.5
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHhCCC
Q 028571 74 FYDLLGIPESVSLVEIKQAYKQMARKYHPD 103 (207)
Q Consensus 74 ~Y~iLgv~~~as~~eIk~ayr~l~~~~HPD 103 (207)
++..|.|....+.++++++-..+..++||+
T Consensus 34 ~l~~k~ig~~Its~eL~~~AqeiL~q~hp~ 63 (138)
T 1qqr_A 34 LLKTLAIGDTITSQELLAQAQSILNKNHPG 63 (138)
T ss_dssp EEEEECTTCEEEHHHHHHHHHHHHHHHSTT
T ss_pred hhcccccCcccCHHHHHHHHHHHHHhcCCC
Confidence 477888888899999999999999999998
No 40
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=22.99 E-value=1.4e+02 Score=19.27 Aligned_cols=54 Identities=15% Similarity=0.155 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHH--HHHHHcCC-hhHHHHHHHhch
Q 028571 83 SVSLVEIKQAYKQMARKYHPDVSPPDRVEEYTQRFIRVQ--EAYETLSD-PGLRALYDRDLS 141 (207)
Q Consensus 83 ~as~~eIk~ayr~l~~~~HPDk~~~~~~~~a~~~f~~I~--~Ay~vLsd-p~~R~~YD~~~~ 141 (207)
-++.++.+.+|+.|...++-+-.-.- +.+ ...|. .-|.+|.+ -.++..|+.+..
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~tW--e~~---~~~i~~DpRY~al~~~~eRk~~F~ey~~ 67 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNASW--EQA---MKMIINDPRYSALAKLSEKKQAFNAYKV 67 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTCCH--HHH---HHHHHTSGGGGGCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCCH--HHH---HHHHccCccccccCCHHHHHHHHHHHHH
Confidence 36899999999999998865444333 221 12222 34666766 356666776653
Done!