BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028572
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU93|MAD2_ARATH Mitotic spindle checkpoint protein MAD2 OS=Arabidopsis thaliana
GN=MAD2 PE=2 SV=1
Length = 209
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/208 (90%), Positives = 197/208 (94%), Gaps = 1/208 (0%)
Query: 1 MASRTVA-KDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDE 59
MAS+T A KDIITL GSAAIVSEFF YAANSILYNR VYPEESFVKVKKYGLPMLL EDE
Sbjct: 1 MASKTAAAKDIITLHGSAAIVSEFFCYAANSILYNRAVYPEESFVKVKKYGLPMLLIEDE 60
Query: 60 GVKSFIANLTAQLSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREK 119
VKSF++NLT+Q+SEWLEAGKLQRVVLVIMSKAT EVLERWNF IETDNEVV+KGVSREK
Sbjct: 61 SVKSFMSNLTSQISEWLEAGKLQRVVLVIMSKATGEVLERWNFRIETDNEVVDKGVSREK 120
Query: 120 SDKEIMREIQAIMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQ 179
SDKEIMREIQAIMRQ+ASS+TYLPCLDETCVFDVLAYTD DVAVPFTWIESDPKLIANPQ
Sbjct: 121 SDKEIMREIQAIMRQVASSVTYLPCLDETCVFDVLAYTDTDVAVPFTWIESDPKLIANPQ 180
Query: 180 MVKLHSFDTKIHKVDTLVSYKNDEWDEQ 207
MVKLH FDTKIHKVDTLVSYKNDEWDE+
Sbjct: 181 MVKLHGFDTKIHKVDTLVSYKNDEWDEE 208
>sp|Q9XFH3|MAD2_MAIZE Mitotic spindle checkpoint protein MAD2 OS=Zea mays GN=MAD2 PE=2
SV=1
Length = 208
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/207 (85%), Positives = 189/207 (91%)
Query: 1 MASRTVAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEG 60
MASR+ +KDIITLRGSAAIVSEFFGYAANSILYNR VYPEESF KVKKYGL MLLT+DEG
Sbjct: 1 MASRSASKDIITLRGSAAIVSEFFGYAANSILYNRAVYPEESFSKVKKYGLTMLLTQDEG 60
Query: 61 VKSFIANLTAQLSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKS 120
VK+FIA+LT+QLSEWLEAGKLQR+VLVIMSKAT EVLERWNF+I TD EVVEKG +EKS
Sbjct: 61 VKNFIASLTSQLSEWLEAGKLQRIVLVIMSKATSEVLERWNFNIVTDAEVVEKGAIKEKS 120
Query: 121 DKEIMREIQAIMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQM 180
DKEIMREIQAIMRQIAS ITYLPCLDE CVFDVLAYTD DV P TW+ESD KLI NPQM
Sbjct: 121 DKEIMREIQAIMRQIASCITYLPCLDEPCVFDVLAYTDTDVDAPGTWVESDAKLIDNPQM 180
Query: 181 VKLHSFDTKIHKVDTLVSYKNDEWDEQ 207
VKLHSFDTKIHKVDTLVSYK DEWDE+
Sbjct: 181 VKLHSFDTKIHKVDTLVSYKKDEWDEE 207
>sp|Q556Y9|MD2L1_DICDI Mitotic spindle assembly checkpoint protein MAD2A OS=Dictyostelium
discoideum GN=mad2l1-1 PE=3 SV=1
Length = 203
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 146/201 (72%), Gaps = 3/201 (1%)
Query: 1 MASRTVAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEG 60
M + +K I+L+GS IV+EFF Y+ N+IL+ RG+YP ESF +V KYGLP+L+T D+
Sbjct: 1 MQAAVASKTNISLKGSTEIVTEFFSYSINTILFQRGLYPPESFTRVAKYGLPILVTNDQS 60
Query: 61 VKSFIANLTAQLSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKG-VSREK 119
+K ++ N+ QLSEWL +G +Q++VLVI TKEVLERW F + TD + ++G R+K
Sbjct: 61 LKDYLDNVLKQLSEWLLSGDVQKLVLVITDIVTKEVLERWVFDVTTD--IPKEGEAPRQK 118
Query: 120 SDKEIMREIQAIMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQ 179
+KEIM EIQAI+RQI +S+T+LP L C FD+L YT KD+AVP W ESDPK I N Q
Sbjct: 119 PEKEIMNEIQAIIRQITASVTFLPLLPNACTFDLLVYTSKDLAVPQKWEESDPKFITNSQ 178
Query: 180 MVKLHSFDTKIHKVDTLVSYK 200
VKL SF T IHKV+++V+YK
Sbjct: 179 QVKLRSFTTTIHKVESMVAYK 199
>sp|Q9Z1B5|MD2L1_MOUSE Mitotic spindle assembly checkpoint protein MAD2A OS=Mus musculus
GN=Mad2l1 PE=2 SV=2
Length = 205
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 139/201 (69%)
Query: 1 MASRTVAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEG 60
MA + + ITLRGSA IV+EFF + NSILY RG+YP E+F +V+KYGL +L T D
Sbjct: 1 MAQQLAREQGITLRGSAEIVAEFFSFGINSILYQRGIYPSETFTRVQKYGLTLLTTTDPE 60
Query: 61 VKSFIANLTAQLSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKS 120
+ ++ N+ QL EWL +Q++V+VI + + EVLERW F IE D E+GV REKS
Sbjct: 61 LIKYLNNVVEQLKEWLYKCSVQKLVVVISNIESGEVLERWQFDIECDKTAKEEGVRREKS 120
Query: 121 DKEIMREIQAIMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQM 180
K I EI++++RQI +++T+LP L+ +C FD+L YTDKD+ VP W ES P+ I N +
Sbjct: 121 QKAIQDEIRSVIRQITATVTFLPLLEVSCSFDLLIYTDKDLVVPEKWEESGPQFITNCEE 180
Query: 181 VKLHSFDTKIHKVDTLVSYKN 201
V+L SF T IHKV+++V+YK
Sbjct: 181 VRLRSFTTTIHKVNSMVAYKT 201
>sp|Q13257|MD2L1_HUMAN Mitotic spindle assembly checkpoint protein MAD2A OS=Homo sapiens
GN=MAD2L1 PE=1 SV=1
Length = 205
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 137/200 (68%)
Query: 1 MASRTVAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEG 60
MA + + ITLRGSA IV+EFF + NSILY RG+YP E+F +V+KYGL +L+T D
Sbjct: 1 MALQLSREQGITLRGSAEIVAEFFSFGINSILYQRGIYPSETFTRVQKYGLTLLVTTDLE 60
Query: 61 VKSFIANLTAQLSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKS 120
+ ++ N+ QL +WL +Q++V+VI + + EVLERW F IE D + REKS
Sbjct: 61 LIKYLNNVVEQLKDWLYKCSVQKLVVVISNIESGEVLERWQFDIECDKTAKDDSAPREKS 120
Query: 121 DKEIMREIQAIMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQM 180
K I EI++++RQI +++T+LP L+ +C FD+L YTDKD+ VP W ES P+ I N +
Sbjct: 121 QKAIQDEIRSVIRQITATVTFLPLLEVSCSFDLLIYTDKDLVVPEKWEESGPQFITNSEE 180
Query: 181 VKLHSFDTKIHKVDTLVSYK 200
V+L SF T IHKV+++V+YK
Sbjct: 181 VRLRSFTTTIHKVNSMVAYK 200
>sp|O14417|MAD2_SCHPO Mitotic spindle checkpoint component mad2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mad2 PE=1 SV=1
Length = 203
Score = 194 bits (494), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 136/190 (71%), Gaps = 1/190 (0%)
Query: 12 TLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQ 71
+L+GS+ +VSEFF YA NSIL+ RG+YP E F V+KYGL ML++ DE VK++I + +Q
Sbjct: 11 SLKGSSKLVSEFFEYAVNSILFQRGIYPAEDFKVVRKYGLNMLVSVDEEVKTYIRKIVSQ 70
Query: 72 LSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIE-TDNEVVEKGVSREKSDKEIMREIQA 130
L +W+ A K+Q+++LVI SK + E LERW F++E D + + ++ + + +EIQA
Sbjct: 71 LHKWMFAKKIQKLILVITSKCSGEDLERWQFNVEMVDTADQFQNIGNKEDELRVQKEIQA 130
Query: 131 IMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVKLHSFDTKI 190
++RQI +++T+LP L+E C F+VL Y DKD VP W++SDP+++ + + V+L SF T +
Sbjct: 131 LIRQITATVTFLPQLEEQCTFNVLVYADKDSEVPTDWVDSDPRILRDAEQVQLRSFSTSM 190
Query: 191 HKVDTLVSYK 200
HK+D V+Y+
Sbjct: 191 HKIDCQVAYR 200
>sp|P40958|MAD2_YEAST Mitotic spindle checkpoint component MAD2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAD2 PE=1
SV=1
Length = 196
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 119/196 (60%), Gaps = 11/196 (5%)
Query: 11 ITLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTA 70
I+L+GS V+EFF Y+ NSILY RGVYP E FV VKKY L +L T D+ +K +I +
Sbjct: 5 ISLKGSTRTVTEFFEYSINSILYQRGVYPAEDFVTVKKYDLTLLKTHDDELKDYIRKILL 64
Query: 71 QLSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSD----KEIMR 126
Q+ WL GK ++VL I+ K EV+ERW+F+++ + G S + D
Sbjct: 65 QVHRWLLGGKCNQLVLCIVDKDEGEVVERWSFNVQHIS-----GNSNGQDDVVDLNTTQS 119
Query: 127 EIQAIMRQIASSITYLPCL--DETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVKLH 184
+I+A++RQI SS+T+LP L + F VLAYTD D VP W +S+ K I + ++V+
Sbjct: 120 QIRALIRQITSSVTFLPELTKEGGYTFTVLAYTDADAKVPLEWADSNSKEIPDGEVVQFK 179
Query: 185 SFDTKIHKVDTLVSYK 200
+F T HKV VSYK
Sbjct: 180 TFSTNDHKVGAQVSYK 195
>sp|D3Z8D9|MD2L2_RAT Mitotic spindle assembly checkpoint protein MAD2B OS=Rattus
norvegicus GN=Mad2l2 PE=2 SV=1
Length = 211
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A ++SEF A + ILY R VYP F K KKY +P+ ++ + +I + + L
Sbjct: 16 ADVLSEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLL 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E +++VV+VI+ K + V E++ F E+ + + SD ++ ++ ++R
Sbjct: 76 EKNDVEKVVVVILDKEHRPV-EKFVF------EITQPPLLSINSDS-LLSHVEQLLRAFI 127
Query: 137 SSITYL-PCLDET---CVFDVLAYTDK---------DVAVPFTWIESDPK--LIANPQMV 181
I+ LD C F VL +T + V F WI +D + + +P+++
Sbjct: 128 LKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLI 187
Query: 182 KLHSFDTKIHKVDTLV---SYKN 201
L + + I K+ V ++KN
Sbjct: 188 PLKTMTSDILKMQLYVEERAHKN 210
>sp|Q9D752|MD2L2_MOUSE Mitotic spindle assembly checkpoint protein MAD2B OS=Mus musculus
GN=Mad2l2 PE=1 SV=2
Length = 211
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A ++SEF A + ILY R VYP F K KKY +P+ ++ + +I + + L
Sbjct: 16 ADVLSEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLL 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E +++VV+VI+ K + V E++ F E+ + + SD ++ ++ ++R
Sbjct: 76 EKNDVEKVVVVILDKEHRPV-EKFVF------EITQPPLLSINSDS-LLSHVEQLLRAFI 127
Query: 137 SSITYL-PCLDET---CVFDVLAYTDK---------DVAVPFTWIESDPK--LIANPQMV 181
I+ LD C F VL +T + V F WI +D + + +P+++
Sbjct: 128 LKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLI 187
Query: 182 KLHSFDTKIHKVDTLV---SYKN 201
L + + I K+ V ++KN
Sbjct: 188 PLKTMTSDILKMQLYVEERAHKN 210
>sp|Q4KWZ6|MD2L2_CHICK Mitotic spindle assembly checkpoint protein MAD2B OS=Gallus gallus
GN=MAD2L2 PE=1 SV=1
Length = 211
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A ++SEF A + ILY R VYP F K KKY +P+ ++ + +I + + L
Sbjct: 16 ADVLSEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLL 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E +++VV+VI+ K V ER+ F I + S ++++R A + +I+
Sbjct: 76 EKNDVEKVVVVILDKEHHPV-ERFVFEITQPPLLSISSESLLSHVEQLLR---AFILKIS 131
Query: 137 SSITYLPCLDETCVFDVLAYTDK---------DVAVPFTWIESDPK--LIANPQMVKLHS 185
L C F VL +T + V F WI +D + + +P+++ L +
Sbjct: 132 VCDAVLDNNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLIPLKT 191
Query: 186 FDTKIHKVDTLV 197
+ I K+ V
Sbjct: 192 MTSDILKMQLYV 203
>sp|Q568H3|MD2L2_DANRE Mitotic spindle assembly checkpoint protein MAD2B OS=Danio rerio
GN=mad2l2 PE=2 SV=1
Length = 211
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A I+ EF A + ILY R +YP F K +KY +P+ ++ + +I + + +
Sbjct: 16 ADILCEFLEVAIHLILYVRDIYPSGIFQKRQKYNVPVQMSCHPQLNQYIQDTLHCVKPLI 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E + ++VV+VIM+K V ER+ F I + +S E + + ++A++ +I+
Sbjct: 76 EKNEAEKVVVVIMNKEHHPV-ERFVFEISQPPLL---AISSETLLSHVEQLLRAMILKIS 131
Query: 137 SSITYLPCLDETCVFDVLAYTDK---------DVAVPFTWIESD 171
L C F VL +T + V F WI +D
Sbjct: 132 VCDAVLDSNPPGCTFTVLVHTREAATRNMEKVQVIKDFPWIVAD 175
>sp|Q9UI95|MD2L2_HUMAN Mitotic spindle assembly checkpoint protein MAD2B OS=Homo sapiens
GN=MAD2L2 PE=1 SV=2
Length = 211
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A ++ EF A + ILY R VYP F K KKY +P+ ++ + +I + + L
Sbjct: 16 ADVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLL 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E +++VV+VI+ K + V E++ F I + S ++++R A + +I+
Sbjct: 76 EKNDVEKVVVVILDKEHRPV-EKFVFEITQPPLLSISSDSLLSHVEQLLR---AFILKIS 131
Query: 137 SSITYLPCLDETCVFDVLAYTDK---------DVAVPFTWIESDPK--LIANPQMVKLHS 185
L C F VL +T + V F WI +D + + +P+++ L +
Sbjct: 132 VCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLIPLKT 191
Query: 186 FDTKIHKVDTLV 197
+ I K+ V
Sbjct: 192 MTSDILKMQLYV 203
>sp|Q2KIP7|MD2L2_BOVIN Mitotic spindle assembly checkpoint protein MAD2B OS=Bos taurus
GN=MAD2L2 PE=2 SV=1
Length = 211
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A ++ EF A + ILY R VYP F K KKY +P+ ++ + +I + + L
Sbjct: 16 ADVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLL 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E +++VV+VI+ K + V E++ F E+ + + SD ++ ++ ++R
Sbjct: 76 EKNDVEKVVVVILDKEHRPV-EKFVF------EITQPPLLPISSDS-LLSHVEQLLRAFI 127
Query: 137 SSITYL-PCLDET---CVFDVLAYTDK---------DVAVPFTWIESDPK--LIANPQMV 181
I+ LD C F VL +T + V F WI +D + + +P+++
Sbjct: 128 LKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLI 187
Query: 182 KLHSFDTKIHKVDTLV 197
L + + I K+ V
Sbjct: 188 PLKTMTSDILKMQLYV 203
>sp|Q8QFR4|MD2L2_XENLA Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus laevis
GN=mad2l2 PE=1 SV=1
Length = 211
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A I+ EF A + ILY R VYP F K KKY +P+ ++ + +I + + +
Sbjct: 16 ADILCEFLEVAVHLILYVREVYPTGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLI 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E +++VV+VI+ K V ER+ F I + S ++++R A + +I+
Sbjct: 76 EKNDVEKVVVVILDKEHHPV-ERFVFEIAQPPLLSISSDSLLSHVEQLLR---AFILKIS 131
Query: 137 SSITYLPCLDETCVFDVLAYTDK---------DVAVPFTWIESDPK--LIANPQMVKLHS 185
L C F +L +T + V F WI +D + + P+++ L +
Sbjct: 132 VCDAVLDNNPPGCTFTLLVHTREAATRNMEKIQVIKDFPWILADEQDVHMQEPRLIPLKT 191
Query: 186 FDTKIHKVDTLV 197
+ I K+ V
Sbjct: 192 MTSDILKMQLYV 203
>sp|Q28H85|MD2L2_XENTR Mitotic spindle assembly checkpoint protein MAD2B OS=Xenopus
tropicalis GN=mad2l2 PE=2 SV=1
Length = 211
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWL 76
A I+ EF A + ILY R VYP F K KKY +P+ ++ + +I + + +
Sbjct: 16 ADILCEFLEVAVHLILYVREVYPIGIFQKRKKYNVPVQMSCHPELNRYIQDTLHCVKPLI 75
Query: 77 EAGKLQRVVLVIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIA 136
E +++VV+VI+ K V ER+ F I + S ++++R A + +I+
Sbjct: 76 EKNDVEKVVVVILDKEHHPV-ERFVFEIAQPPLLSISSDSLLSHVEQLLR---AFILKIS 131
Query: 137 SSITYLPCLDETCVFDVLAYTDK---------DVAVPFTWIESDPK--LIANPQMVKLHS 185
L C F +L +T + V F WI +D + + P+++ L +
Sbjct: 132 VCDAVLDNNPPGCTFTLLVHTREAATRNMEKIQVIKDFPWILADEQDVHMQEPRLIPLKT 191
Query: 186 FDTKIHKVDTLV 197
+ I K+ V
Sbjct: 192 MTSDILKMQLYV 203
>sp|Q0E7J8|REV7_SCHPO DNA polymerase zeta processivity subunit OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rev7 PE=3 SV=1
Length = 213
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 12 TLRGSAAIVSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQ 71
+++ I EF + + ILY R +YP++ F+K +KY + + + +I +
Sbjct: 8 SVKKCIDIFGEFLLVSIHCILYARRLYPQDLFIKARKYNTIVWQSRHPILCEYIEEVVQS 67
Query: 72 LSEWLEAGKLQRVVLVIMSKATKEVLERWNFSIET----DNEVVEKGVSREKSDKEIMRE 127
E L+ G + +V L I++K +E ER+ FS ++ + ++EK +S + + E
Sbjct: 68 CIEELQTGSVHQVALSIINKEQREE-ERYVFSTDSIPIIPDFLLEKQISTNEPFTDAYVE 126
Query: 128 -IQAIMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIE 169
++A + Q+ + LP +++ C + + P W E
Sbjct: 127 YMRASLIQLLNITNGLPLIEQECTWTLRVTLKDGFPRPKQWEE 169
>sp|Q54S00|MD2L2_DICDI Mitotic spindle assembly checkpoint protein MAD2B OS=Dictyostelium
discoideum GN=mad2l2 PE=3 SV=1
Length = 332
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 20 VSEFFGYAANSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWLEAG 79
+ EF + + ILY RGVYP F K KY +P+ ++ + + +I+N L
Sbjct: 10 IGEFLETSFHCILYIRGVYPSCLFSKSIKYDIPVPISRSDLLTRYISNSIDSLKPHFLKD 69
Query: 80 KLQRVVLVIMSKATKEVLERWNFSIET 106
++++ L I++K K + E++ F I +
Sbjct: 70 TIEKISLTILNKYDKPI-EKFIFEISS 95
>sp|Q8F3J9|HPRK_LEPIN HPr kinase/phosphorylase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=hprK
PE=3 SV=1
Length = 321
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 19 IVSEFFGYAANSILYNRGVYPEESFVK-VKKYGLPMLLTEDEGVKSFIANLTAQLSEWLE 77
I +EFFG+ N I++ G P F++ +K G+P++++E FI ++ L L
Sbjct: 79 IAAEFFGFHLNCIIFTHGNMPPPIFMENCEKLGIPLMISEVS-THKFITLISGILDRSLA 137
Query: 78 AGKLQRVVLV 87
++ VL+
Sbjct: 138 PRTMRHGVLI 147
>sp|Q72S40|HPRK_LEPIC HPr kinase/phosphorylase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=hprK PE=3 SV=1
Length = 321
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 19 IVSEFFGYAANSILYNRGVYPEESFVK-VKKYGLPMLLTEDEGVKSFIANLTAQLSEWLE 77
I +EFFG+ N I++ G P F++ +K G+P++++E FI ++ L L
Sbjct: 79 IAAEFFGFHLNCIIFTHGNMPPPIFMENCEKLGIPLMISEVS-THKFITLISGILDRSLA 137
Query: 78 AGKLQRVVLV 87
++ VL+
Sbjct: 138 PRTMRHGVLI 147
>sp|P64228|GLMS_STAAN Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Staphylococcus aureus (strain N315) GN=glmS PE=1 SV=2
Length = 601
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 34 NRGVYPEESFVKV-----KKYGL------------------PMLLTEDEGVKSFIANLTA 70
N+G+ EE+F KV Y L P+LL EG ++ A
Sbjct: 137 NQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALA 196
Query: 71 QL---SEWLEAGKLQRVVL----VIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKE 123
L SE+ E + V++ VI+ A V+ER ++ E D EKGV KE
Sbjct: 197 MLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKE 256
Query: 124 IMREIQAIMRQI 135
I E A+MR+I
Sbjct: 257 I-HEQPAVMRRI 267
>sp|P64227|GLMS_STAAM Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=glmS PE=1 SV=2
Length = 601
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 34 NRGVYPEESFVKV-----KKYGL------------------PMLLTEDEGVKSFIANLTA 70
N+G+ EE+F KV Y L P+LL EG ++ A
Sbjct: 137 NQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALA 196
Query: 71 QL---SEWLEAGKLQRVVL----VIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKE 123
L SE+ E + V++ VI+ A V+ER ++ E D EKGV KE
Sbjct: 197 MLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKE 256
Query: 124 IMREIQAIMRQI 135
I E A+MR+I
Sbjct: 257 I-HEQPAVMRRI 267
>sp|Q8NVE6|GLMS_STAAW Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Staphylococcus aureus (strain MW2) GN=glmS PE=3 SV=2
Length = 601
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 34 NRGVYPEESFVKV-----KKYGL------------------PMLLTEDEGVKSFIANLTA 70
N+G+ EE+F KV Y L P+LL EG ++ A
Sbjct: 137 NQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALA 196
Query: 71 QL---SEWLEAGKLQRVVL----VIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKE 123
L SE+ E + V++ VI+ A V+ER ++ E D EKGV KE
Sbjct: 197 MLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKE 256
Query: 124 IMREIQAIMRQI 135
I E A+MR+I
Sbjct: 257 I-HEQPAVMRRI 267
>sp|Q6G7F8|GLMS_STAAS Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Staphylococcus aureus (strain MSSA476) GN=glmS PE=3
SV=3
Length = 601
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 34 NRGVYPEESFVKV-----KKYGL------------------PMLLTEDEGVKSFIANLTA 70
N+G+ EE+F KV Y L P+LL EG ++ A
Sbjct: 137 NQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALA 196
Query: 71 QL---SEWLEAGKLQRVVL----VIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKE 123
L SE+ E + V++ VI+ A V+ER ++ E D EKGV KE
Sbjct: 197 MLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKE 256
Query: 124 IMREIQAIMRQI 135
I E A+MR+I
Sbjct: 257 I-HEQPAVMRRI 267
>sp|Q6GES3|GLMS_STAAR Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Staphylococcus aureus (strain MRSA252) GN=glmS PE=3
SV=3
Length = 601
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 34 NRGVYPEESFVKV-----KKYGL------------------PMLLTEDEGVKSFIANLTA 70
N+G+ EE+F KV Y L P+LL EG ++ A
Sbjct: 137 NQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALA 196
Query: 71 QL---SEWLEAGKLQRVVL----VIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKE 123
L SE+ E + V++ VI+ A V+ER ++ E D EKGV KE
Sbjct: 197 MLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKE 256
Query: 124 IMREIQAIMRQI 135
I E A+MR+I
Sbjct: 257 I-HEQPAVMRRI 267
>sp|Q5HE49|GLMS_STAAC Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
OS=Staphylococcus aureus (strain COL) GN=glmS PE=3 SV=3
Length = 601
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 31/132 (23%)
Query: 34 NRGVYPEESFVKV-----KKYGL------------------PMLLTEDEGVKSFIANLTA 70
N+G+ EE+F KV Y L P+LL EG ++ A
Sbjct: 137 NQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALA 196
Query: 71 QL---SEWLEAGKLQRVVL----VIMSKATKEVLERWNFSIETDNEVVEKGVSREKSDKE 123
L SE+ E + V++ VI+ A V+ER ++ E D EKGV KE
Sbjct: 197 MLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKE 256
Query: 124 IMREIQAIMRQI 135
I E A+MR+I
Sbjct: 257 I-HEQPAVMRRI 267
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 29 NSILYNRGVYPEESFVKVKKYGLPMLLTEDEGVKSFIANLTAQLSEWLEAGKLQRVVLVI 88
S+L V+ KV L +L E+ G S +ANL + +W EA K+++
Sbjct: 587 GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK----- 641
Query: 89 MSKATKEVLERWNFS-IETDNEV----VEKGVSREKSD-----KEIMREIQAIMRQIASS 138
S V + FS IE ++V VE G EK++ K+I EI+ M + +
Sbjct: 642 -SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKK-MGYVPDT 699
Query: 139 ITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPK 173
+ L L+E +L + + +A+ F I + K
Sbjct: 700 ASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDK 734
>sp|B0SR57|HPRK_LEPBP HPr kinase/phosphorylase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / ATCC 23582 / Paris) GN=hprK PE=3 SV=1
Length = 322
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFV-KVKKYGLPMLLTEDEGVKSFIANLTAQLSEW 75
I +FF + N I+Y G P+ FV + K+ G+P+ TE FI ++ L
Sbjct: 77 GEITDKFFEFHLNCIIYTHGNEPQVPFVERAKEKGIPLFKTEI-ATHRFITLISQILDRA 135
Query: 76 LEAGKLQRVVLV 87
L ++ VL+
Sbjct: 136 LAPRTMRHGVLI 147
>sp|B0S8M8|HPRK_LEPBA HPr kinase/phosphorylase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / Ames) GN=hprK PE=3 SV=1
Length = 322
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 17 AAIVSEFFGYAANSILYNRGVYPEESFV-KVKKYGLPMLLTEDEGVKSFIANLTAQLSEW 75
I +FF + N I+Y G P+ FV + K+ G+P+ TE FI ++ L
Sbjct: 77 GEITDKFFEFHLNCIIYTHGNEPQVPFVERAKEKGIPLFKTEI-ATHRFITLISQILDRA 135
Query: 76 LEAGKLQRVVLV 87
L ++ VL+
Sbjct: 136 LAPRTMRHGVLI 147
>sp|Q58373|Y963_METJA Uncharacterized protein MJ0963 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0963 PE=3 SV=1
Length = 563
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 25 GYAANSI------LYNRG-VYPEESFV---KVKKYGLPMLLTEDEGVKSFIANLTAQLSE 74
GYA SI LY+ G + P V K+ K L ++ + KS I +L AQ++
Sbjct: 130 GYAPGSISSNVKELYHEGLIIPPSKLVINGKLNKELLNLITSNVRVPKSTIGDLKAQIAS 189
Query: 75 WLEAGKLQRVVLVIMSKATKEVLERWNFSIETDNE 109
L G ++R++ +I +EV E WN S++ E
Sbjct: 190 -LNIG-VERILKLIEKYGDREVTEAWNKSLDYSEE 222
>sp|A5CWL9|SYM_VESOH Methionine--tRNA ligase OS=Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA) GN=metG PE=3 SV=1
Length = 545
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 65 IANLTAQLSEWLEAGKLQRVVLVIMSKATKEVLERWNFS 103
+ QL EW +AG LQ + +S+ KE L++W+ S
Sbjct: 193 LPQFEVQLKEWTKAGHLQDAISNKLSEWFKEGLQQWDIS 231
>sp|Q9XTM1|EXOC5_DROME Exocyst complex component 5 OS=Drosophila melanogaster GN=sec10
PE=2 SV=1
Length = 710
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 145 LDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVK 182
L E C D L Y DK V F + +D ++I N +K
Sbjct: 669 LQEVCTGDTLNYLDKSVVRQFIQLRTDFRIIKNTNYLK 706
>sp|O67810|HSLO_AQUAE 33 kDa chaperonin OS=Aquifex aeolicus (strain VF5) GN=hslO PE=3
SV=1
Length = 325
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 90 SKATKEVLERWNFSIETDNEVVEKGVSREKSDKEIMREIQAIMRQIASSITYLPCLDE 147
S+ KE+LE+ S+ E++EKG+ E EI+++++ + + Y PC +E
Sbjct: 208 SEKVKELLEKRILSLPPVTEMMEKGMRPEDIAVEILKDMEPQLIGLKEVEYYCPCDEE 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,556,625
Number of Sequences: 539616
Number of extensions: 2606141
Number of successful extensions: 7805
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 7782
Number of HSP's gapped (non-prelim): 41
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)