Query 028574
Match_columns 207
No_of_seqs 149 out of 1317
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 22:53:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028574.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028574hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2igv_A Peptidyl-prolyl CIS-tra 100.0 6.3E-55 2.2E-59 344.8 21.6 170 37-206 3-172 (173)
2 1a58_A Cyclophilin; isomerase, 100.0 6.6E-54 2.3E-58 340.1 22.5 172 35-206 4-177 (177)
3 2wfi_A Peptidyl-prolyl CIS-tra 100.0 7.6E-54 2.6E-58 340.2 22.4 171 35-205 7-179 (179)
4 1qng_A Peptidyl-prolyl CIS-tra 100.0 4.5E-54 1.5E-58 339.0 20.2 169 36-205 2-170 (170)
5 2poy_A Peptidyl-prolyl CIS-tra 100.0 6.4E-54 2.2E-58 342.1 21.2 173 32-204 14-186 (186)
6 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.5E-53 5.3E-58 334.5 21.5 162 37-206 3-165 (165)
7 2r99_A Peptidyl-prolyl CIS-tra 100.0 1.6E-53 5.6E-58 336.6 21.6 166 34-206 8-173 (173)
8 2he9_A NK-tumor recognition pr 100.0 2.3E-53 8E-58 340.4 22.4 173 34-206 16-190 (192)
9 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.7E-53 5.9E-58 336.0 21.1 164 35-206 8-172 (172)
10 3pmp_A Cyclophilin A; peptidyl 100.0 3.2E-53 1.1E-57 332.6 21.4 162 37-206 2-164 (164)
11 3rdd_A Peptidyl-prolyl CIS-tra 100.0 7.5E-53 2.6E-57 335.7 20.7 166 34-206 19-184 (184)
12 2haq_A Cyclophilin; rotamase, 100.0 7E-53 2.4E-57 332.2 20.1 163 34-205 8-172 (172)
13 1mzw_A Cyclophilin H, U-snRNP- 100.0 6.6E-53 2.3E-57 334.2 19.6 169 35-205 8-177 (177)
14 4fru_A Cyclophilin B, peptidyl 100.0 9.1E-53 3.1E-57 335.8 19.8 168 32-206 7-175 (185)
15 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.4E-52 4.7E-57 335.0 20.1 168 31-206 9-178 (188)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 6.6E-52 2.2E-56 332.4 22.0 165 35-206 25-191 (193)
17 1z81_A Cyclophilin; structural 100.0 5E-51 1.7E-55 334.0 20.1 169 35-205 57-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 2.7E-51 9.2E-56 323.6 13.5 161 36-205 2-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 1E-48 3.5E-53 322.0 18.5 173 32-206 9-207 (234)
20 1ihg_A Cyclophilin 40; ppiase 100.0 3.5E-48 1.2E-52 338.5 21.8 170 37-206 15-185 (370)
21 1w74_A Peptidyl-prolyl CIS-tra 100.0 4E-47 1.4E-51 303.8 19.3 163 34-205 20-191 (191)
22 2fu0_A Cyclophilin, putative; 100.0 2.4E-47 8.1E-52 297.8 17.4 147 49-206 12-160 (160)
23 2x7k_A Peptidyl-prolyl CIS-tra 100.0 3.6E-47 1.2E-51 298.4 18.0 152 38-205 12-165 (166)
24 2ok3_A Peptidyl-prolyl CIS-tra 100.0 3.3E-47 1.1E-51 297.5 16.7 147 49-206 7-156 (161)
25 2poe_A Cyclophilin-like protei 100.0 3.5E-47 1.2E-51 303.1 16.7 152 43-206 18-175 (185)
26 1zkc_A Peptidyl-prolyl CIS-tra 100.0 8.9E-47 3E-51 302.8 19.1 147 49-206 26-175 (197)
27 2a2n_A Peptidylprolyl isomeras 100.0 1.1E-46 3.9E-51 297.9 18.2 145 49-204 28-175 (176)
28 2b71_A Cyclophilin-like protei 100.0 1.4E-46 4.6E-51 301.7 18.2 154 37-206 38-193 (196)
29 2k7n_A Peptidyl-prolyl CIS-tra 100.0 2E-46 7E-51 301.8 17.0 153 38-206 12-166 (203)
30 3bo7_A Peptidyl-prolyl CIS-tra 100.0 4.6E-46 1.6E-50 300.5 17.3 154 39-206 6-173 (201)
31 2hq6_A Serologically defined c 100.0 3.7E-45 1.3E-49 291.2 15.7 156 34-206 21-180 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 5.3E-45 1.8E-49 286.4 15.8 152 37-206 4-166 (166)
33 1lop_A Cyclophilin A; rotamase 100.0 5.1E-45 1.7E-49 286.0 14.1 144 49-206 6-164 (164)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 4.8E-44 1.6E-48 281.3 15.3 144 49-205 10-167 (167)
35 3bkp_A Cyclophilin; malaria, i 100.0 8.6E-44 2.9E-48 292.2 15.8 157 33-206 17-193 (232)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 1.8E-38 6.2E-43 274.7 8.2 157 28-201 159-355 (369)
37 3kop_A Uncharacterized protein 96.3 0.039 1.3E-06 42.7 9.9 118 40-184 22-166 (188)
38 2nnz_A Hypothetical protein; b 95.0 0.029 1E-06 42.5 4.8 106 41-184 31-143 (153)
39 1zx8_A Hypothetical protein TM 80.5 4.9 0.00017 29.5 6.4 96 52-184 22-124 (136)
40 4ank_A Transthyretin; hormone 34.1 18 0.00063 26.8 1.8 15 47-61 41-55 (147)
41 4dz1_A DALS D-alanine transpor 28.3 24 0.00081 27.2 1.7 7 1-7 1-7 (259)
42 4i62_A Amino acid ABC transpor 28.0 15 0.0005 28.1 0.4 12 1-12 2-13 (269)
43 2k9u_B Filamin-binding LIM pro 26.1 38 0.0013 17.2 1.6 14 147-160 7-20 (26)
44 1x7f_A Outer surface protein; 20.1 1E+02 0.0035 26.4 4.2 50 134-184 326-376 (385)
No 1
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=6.3e-55 Score=344.79 Aligned_cols=170 Identities=71% Similarity=1.234 Sum_probs=162.6
Q ss_pred CceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCC
Q 028574 37 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGG 116 (207)
Q Consensus 37 ~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 116 (207)
++++|||+.+++++.|+|+||||++.||++|+||++||++++|.+..++..||+|+.||||+|+|||||||+..+++.++
T Consensus 3 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg 82 (173)
T 2igv_A 3 RSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGG 82 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCC
Confidence 67999999999999999999999999999999999999988777767788899999999999999999999987888899
Q ss_pred ccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCcccc
Q 028574 117 ESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSK 196 (207)
Q Consensus 117 ~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P~~~ 196 (207)
+++|+..+++|+..++|.++|+||||+.+|++++|||||++++.|+||++|+|||||++|||||++|++.++++++|.++
T Consensus 83 ~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~ 162 (173)
T 2igv_A 83 ESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKD 162 (173)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSC
T ss_pred CccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred eEEeeeeeec
Q 028574 197 VVVADSGELP 206 (207)
Q Consensus 197 i~I~~cg~l~ 206 (207)
|+|.+||+|+
T Consensus 163 v~I~~~g~l~ 172 (173)
T 2igv_A 163 CMIADCGQLK 172 (173)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEeEEEc
Confidence 9999999996
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=6.6e-54 Score=340.09 Aligned_cols=172 Identities=57% Similarity=0.943 Sum_probs=160.0
Q ss_pred ccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCC-CCcccccCCEEEEeecCceeEeccCCCCCC
Q 028574 35 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQGGDFTLGDG 113 (207)
Q Consensus 35 ~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~-~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 113 (207)
..++++|||+++++++.|+|+||||++.||++|+||++||++++|.++. ++..||+|+.||||+|+|+|||||+..+++
T Consensus 4 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 83 (177)
T 1a58_A 4 KDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDG 83 (177)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSS
T ss_pred CCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCC
Confidence 3568999999999999999999999999999999999999998876543 456699999999999999999999987888
Q ss_pred CCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCC
Q 028574 114 RGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGT 192 (207)
Q Consensus 114 ~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~ 192 (207)
.+++++|+..+++|+..++|+++|+||||+.+|++++|||||++++.|+||++|+|||||++|||||++|++.++ ++++
T Consensus 84 ~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~ 163 (177)
T 1a58_A 84 TGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNR 163 (177)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997765 4589
Q ss_pred cccceEEeeeeeec
Q 028574 193 PKSKVVVADSGELP 206 (207)
Q Consensus 193 P~~~i~I~~cg~l~ 206 (207)
|.++|+|.+||+|.
T Consensus 164 P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 164 PLADVVILNCGELV 177 (177)
T ss_dssp BSSCEEEEEEEEEC
T ss_pred CCCCeEEEEeEEEC
Confidence 99999999999984
No 3
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=7.6e-54 Score=340.18 Aligned_cols=171 Identities=56% Similarity=0.954 Sum_probs=160.3
Q ss_pred ccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCC-CCCcccccCCEEEEeecCceeEeccCCCCCC
Q 028574 35 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQGGDFTLGDG 113 (207)
Q Consensus 35 ~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~-~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 113 (207)
..++++|||+++++|+.|+|+||||++.||++|+||++||+|++|.++ .++.+||+|+.||||+|+|||||||+..+++
T Consensus 7 ~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g 86 (179)
T 2wfi_A 7 VQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNG 86 (179)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCC
Confidence 457899999999999999999999999999999999999999888763 4577899999999999999999999987888
Q ss_pred CCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCC
Q 028574 114 RGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGT 192 (207)
Q Consensus 114 ~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~ 192 (207)
.+++++|+..+++|+..++|+++|+|+||+.+|++++|||||++++.|+||++|+|||||++|||||++|++.++ ++++
T Consensus 87 ~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~ 166 (179)
T 2wfi_A 87 RGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASK 166 (179)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSC
T ss_pred CCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999997765 5689
Q ss_pred cccceEEeeeeee
Q 028574 193 PKSKVVVADSGEL 205 (207)
Q Consensus 193 P~~~i~I~~cg~l 205 (207)
|.++|+|.+||+|
T Consensus 167 P~~~v~I~~~G~l 179 (179)
T 2wfi_A 167 PFAEVRILSCGEL 179 (179)
T ss_dssp BSSCEEEEEEEEC
T ss_pred CCCCeEEEeCeeC
Confidence 9999999999987
No 4
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=4.5e-54 Score=339.01 Aligned_cols=169 Identities=63% Similarity=1.081 Sum_probs=158.9
Q ss_pred cCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCC
Q 028574 36 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRG 115 (207)
Q Consensus 36 ~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 115 (207)
.+++||||+++++++.|+|+||||++.||++|+||++||+++ |++..++..+|+|+.||||+|+|||||||+..+++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 468999999999999999999999999999999999999865 5555566677999999999999999999998788888
Q ss_pred CccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCccc
Q 028574 116 GESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKS 195 (207)
Q Consensus 116 ~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P~~ 195 (207)
++++|+..+++|+..++|.++|+||||+.+|++++|||||++++.++||++|+|||||++|||||++|++.++++++|.+
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~ 160 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKR 160 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred ceEEeeeeee
Q 028574 196 KVVVADSGEL 205 (207)
Q Consensus 196 ~i~I~~cg~l 205 (207)
+|+|.+||+|
T Consensus 161 ~v~I~~cG~l 170 (170)
T 1qng_A 161 SVVITDCGEL 170 (170)
T ss_dssp CEEEEEEEEC
T ss_pred CeEEEeceeC
Confidence 9999999987
No 5
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=6.4e-54 Score=342.07 Aligned_cols=173 Identities=66% Similarity=1.082 Sum_probs=161.1
Q ss_pred cccccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCC
Q 028574 32 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLG 111 (207)
Q Consensus 32 ~~~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~ 111 (207)
.....++++|||+.+++++.|+|+||||++.||++|+||++||++++|+++.++..+|+|+.||||+|+|||||||+..+
T Consensus 14 ~~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 14 LYFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp ----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred cccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 34567789999999999999999999999999999999999999888877777888899999999999999999999878
Q ss_pred CCCCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCC
Q 028574 112 DGRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG 191 (207)
Q Consensus 112 ~~~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~ 191 (207)
++.+++++|+..+++|+..++|.++|+|+||+.+|++++|||||++++.++||++|+|||||++|||||++|++.+++++
T Consensus 94 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~ 173 (186)
T 2poy_A 94 DGTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNG 173 (186)
T ss_dssp SSSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTS
T ss_pred CCCCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccceEEeeeee
Q 028574 192 TPKSKVVVADSGE 204 (207)
Q Consensus 192 ~P~~~i~I~~cg~ 204 (207)
+|.++|+|.+||+
T Consensus 174 ~P~~~v~I~~cG~ 186 (186)
T 2poy_A 174 KPTKSVCITASGV 186 (186)
T ss_dssp CCSSCEEEEEEEC
T ss_pred CCCCCEEEEeCCC
Confidence 9999999999996
No 6
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.5e-53 Score=334.47 Aligned_cols=162 Identities=66% Similarity=1.147 Sum_probs=154.8
Q ss_pred CceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCccc-ccCCEEEEeecCceeEeccCCCCCCCC
Q 028574 37 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLH-YKGSTFHRIIPSFMLQGGDFTLGDGRG 115 (207)
Q Consensus 37 ~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 115 (207)
++++|||+++++|++|+|+||||++.||++|+||++||+|++| | |+|+.|||++|+|+|||||+..+++.+
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g 74 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKG--------FGYKGSTFHRVIPSFMCQAGDFTNHNGTG 74 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCC--------ccCcCCEEEEEECCCEEEeCCccCCCCCC
Confidence 5799999999999999999999999999999999999987665 6 999999999999999999998778888
Q ss_pred CccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCccc
Q 028574 116 GESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKS 195 (207)
Q Consensus 116 ~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P~~ 195 (207)
++++|+..+++|+..++|.++|+|+||+.+|++++|||||++++.++||++|+|||||++|||||++|++.++++++|.+
T Consensus 75 g~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~ 154 (165)
T 2z6w_A 75 GKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSK 154 (165)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSS
T ss_pred CCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCC
Confidence 88999999999998999998999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeeeeeec
Q 028574 196 KVVVADSGELP 206 (207)
Q Consensus 196 ~i~I~~cg~l~ 206 (207)
+|+|.+||+|+
T Consensus 155 ~v~I~~~g~l~ 165 (165)
T 2z6w_A 155 KIVITDCGQLS 165 (165)
T ss_dssp CEEEEEEEECC
T ss_pred cEEEEEeEEEC
Confidence 99999999984
No 7
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=1.6e-53 Score=336.59 Aligned_cols=166 Identities=63% Similarity=1.077 Sum_probs=155.8
Q ss_pred cccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCC
Q 028574 34 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDG 113 (207)
Q Consensus 34 ~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 113 (207)
...++++|||+.+++|+.|+|+||||++.||++|+||++||++++|+ +|+|+.|||++|+|||||||+..+++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g 80 (173)
T 2r99_A 8 ARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGF-------GFKGSSFHRIIPQFMCQGGDFTNHNG 80 (173)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSC-------CSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred ccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCc-------eecCCEEEEeeCCCEEEeCCcCCCCC
Confidence 34578999999999999999999999999999999999999876652 39999999999999999999987888
Q ss_pred CCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCc
Q 028574 114 RGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 193 (207)
Q Consensus 114 ~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P 193 (207)
.+++++|+..+++|+..++|+++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|++.++++++|
T Consensus 81 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P 160 (173)
T 2r99_A 81 TGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKP 160 (173)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCC
T ss_pred CCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccceEEeeeeeec
Q 028574 194 KSKVVVADSGELP 206 (207)
Q Consensus 194 ~~~i~I~~cg~l~ 206 (207)
.++|+|.+||+|.
T Consensus 161 ~~~v~I~~cG~l~ 173 (173)
T 2r99_A 161 KQKVIIADCGEYV 173 (173)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCeEEEEeeeEC
Confidence 9999999999984
No 8
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-53 Score=340.36 Aligned_cols=173 Identities=54% Similarity=0.898 Sum_probs=160.6
Q ss_pred cccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCC-CCCcccccCCEEEEeecCceeEeccCCCCC
Q 028574 34 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQGGDFTLGD 112 (207)
Q Consensus 34 ~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~-~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~ 112 (207)
...+++||||+++++|++|+|+||||++.||++|+||++||+|++|.++ .+|.+||+|+.||||+|+|||||||+..++
T Consensus 16 ~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 16 PRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp ---CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 4678899999999999999999999999999999999999999888763 457889999999999999999999998788
Q ss_pred CCCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCC
Q 028574 113 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNG 191 (207)
Q Consensus 113 ~~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~ 191 (207)
+.+++++|+..+++|+..++|.++|+|+||+.+|++++|||||++++.|+||++|+|||||++|||||++|++.++ +++
T Consensus 96 G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~ 175 (192)
T 2he9_A 96 GKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAAS 175 (192)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS
T ss_pred CCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999997765 568
Q ss_pred CcccceEEeeeeeec
Q 028574 192 TPKSKVVVADSGELP 206 (207)
Q Consensus 192 ~P~~~i~I~~cg~l~ 206 (207)
+|..+|+|.+||+|.
T Consensus 176 ~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 176 RPYADVRVIDCGVLA 190 (192)
T ss_dssp CBSSCEEEEEEEECC
T ss_pred CCcCCeEEEEeEEEc
Confidence 999999999999985
No 9
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.7e-53 Score=336.01 Aligned_cols=164 Identities=59% Similarity=1.034 Sum_probs=155.7
Q ss_pred ccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCccc-ccCCEEEEeecCceeEeccCCCCCC
Q 028574 35 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLH-YKGSTFHRIIPSFMLQGGDFTLGDG 113 (207)
Q Consensus 35 ~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~ 113 (207)
..++++|||+.+++|+.|+|+||||++.||++|+||++||++++| | |+|+.||||+|+|+|||||+..+++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG--------FGYHNCCFHRVIPQFMCQGGDFVKGDG 79 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC--------ceECCCEEEEEECCCEEEcCCccCCCC
Confidence 457899999999999999999999999999999999999987655 5 9999999999999999999987888
Q ss_pred CCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCc
Q 028574 114 RGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 193 (207)
Q Consensus 114 ~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P 193 (207)
.+++++|+..+++|+..++|.++|+|+||+.+|++++|||||++++.++||++|+|||+|++|||||++|++.++++++|
T Consensus 80 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P 159 (172)
T 2cmt_A 80 TGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKV 159 (172)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCC
T ss_pred CCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 88999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeeeeeec
Q 028574 194 KSKVVVADSGELP 206 (207)
Q Consensus 194 ~~~i~I~~cg~l~ 206 (207)
.++|+|.+||+|+
T Consensus 160 ~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 160 KEPVIISRCGELI 172 (172)
T ss_dssp SSCEEEEEEEEEC
T ss_pred CCCEEEEEeEeEC
Confidence 9999999999985
No 10
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3.2e-53 Score=332.59 Aligned_cols=162 Identities=62% Similarity=1.090 Sum_probs=154.8
Q ss_pred CceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCccc-ccCCEEEEeecCceeEeccCCCCCCCC
Q 028574 37 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLH-YKGSTFHRIIPSFMLQGGDFTLGDGRG 115 (207)
Q Consensus 37 ~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~-Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 115 (207)
++++||||.+++|+.|+|+||||++.||++|+||++||+|++| + |+|+.|||++|+|++||||+..+++.+
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g 73 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG--------FGYKDSIFHRVIPQFMLQGGDFTRHNGTG 73 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC--------CcccCCEEEEEECCCeEEeCCCCCCCCCC
Confidence 5799999999999999999999999999999999999987665 5 999999999999999999977788899
Q ss_pred CccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCccc
Q 028574 116 GESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKS 195 (207)
Q Consensus 116 ~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P~~ 195 (207)
++++++..+++|...++|.++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|++.++++++|.+
T Consensus 74 g~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~ 153 (164)
T 3pmp_A 74 GKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNA 153 (164)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred ceEEeeeeeec
Q 028574 196 KVVVADSGELP 206 (207)
Q Consensus 196 ~i~I~~cg~l~ 206 (207)
+|+|.+||+|.
T Consensus 154 ~v~I~~cg~l~ 164 (164)
T 3pmp_A 154 TIKITDCGTVA 164 (164)
T ss_dssp CEEEEEEEEC-
T ss_pred CEEEEeCeEEC
Confidence 99999999983
No 11
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=7.5e-53 Score=335.67 Aligned_cols=166 Identities=63% Similarity=1.081 Sum_probs=156.5
Q ss_pred cccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCC
Q 028574 34 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDG 113 (207)
Q Consensus 34 ~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 113 (207)
+..+++||||+.+++++.|+|+||||++.||++|+||++||++++|+ .|+|+.|||++|+|+|||||+..+++
T Consensus 19 ~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 19 GMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGF-------GYKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC-------SSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCc-------ccCCCEEEEccCCcEEEeCCCCCCCC
Confidence 45679999999999999999999999999999999999999877652 19999999999999999999887888
Q ss_pred CCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCc
Q 028574 114 RGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 193 (207)
Q Consensus 114 ~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P 193 (207)
.+++++++..+++|+..++|+++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|++.++++++|
T Consensus 92 ~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P 171 (184)
T 3rdd_A 92 TGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT 171 (184)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCC
T ss_pred CCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeeeeeec
Q 028574 194 KSKVVVADSGELP 206 (207)
Q Consensus 194 ~~~i~I~~cg~l~ 206 (207)
.++|+|.+||+|+
T Consensus 172 ~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 172 SKKITIADCGQLE 184 (184)
T ss_dssp SSCEEEEEEEECC
T ss_pred cCCeEEEeCeEEC
Confidence 9999999999985
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=7e-53 Score=332.23 Aligned_cols=163 Identities=65% Similarity=1.075 Sum_probs=153.8
Q ss_pred cccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCccc-ccCCEEEEeecCceeEeccCCCCC
Q 028574 34 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLH-YKGSTFHRIIPSFMLQGGDFTLGD 112 (207)
Q Consensus 34 ~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~-Y~g~~f~rv~~~~~iq~G~~~~~~ 112 (207)
|..++++|||+.+++|+.|+|+||||++.||++|+||++||+|++| | |+|+.|||++|+|+|||||+..++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 8 PEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG--------FGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEECCCEEecCCccCCC
Confidence 5678999999999999999999999999999999999999987665 6 999999999999999999977788
Q ss_pred CCCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCC-C
Q 028574 113 GRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQN-G 191 (207)
Q Consensus 113 ~~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~-~ 191 (207)
+.+++++|+..+++|+..++|. +|+||||+.++++++|||||++++.++||++|+|||||++|||||++|++.++.+ +
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 8889999999999998899998 9999999999999999999999999999999999999999999999999877654 5
Q ss_pred CcccceEEeeeeee
Q 028574 192 TPKSKVVVADSGEL 205 (207)
Q Consensus 192 ~P~~~i~I~~cg~l 205 (207)
+|.++|+|.+||+|
T Consensus 159 ~P~~~v~I~~~g~l 172 (172)
T 2haq_A 159 RPVKPVKIVASGEL 172 (172)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred cCCCCeEEEEeEEC
Confidence 99999999999986
No 13
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=6.6e-53 Score=334.24 Aligned_cols=169 Identities=56% Similarity=0.990 Sum_probs=157.1
Q ss_pred ccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCC
Q 028574 35 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGR 114 (207)
Q Consensus 35 ~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 114 (207)
+.++++|||+.+++|+.|+|+||||++.||++|+||++||+++.|. .++..+|+|+.||||+|+|+|||||+..+++.
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 85 (177)
T 1mzw_A 8 PVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGT 85 (177)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSC
T ss_pred CCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccCCCC
Confidence 4578999999999999999999999999999999999999876543 23555699999999999999999999878889
Q ss_pred CCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCCc
Q 028574 115 GGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGTP 193 (207)
Q Consensus 115 ~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~P 193 (207)
+++++|+..+++|+..++|+++|+||||+.+|++++|||||++++.++||++|+|||||++|||||++|++.++ ++++|
T Consensus 86 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P 165 (177)
T 1mzw_A 86 GVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKP 165 (177)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCB
T ss_pred CCCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998776 67999
Q ss_pred ccceEEeeeeee
Q 028574 194 KSKVVVADSGEL 205 (207)
Q Consensus 194 ~~~i~I~~cg~l 205 (207)
.++|+|.+||+|
T Consensus 166 ~~~v~I~~cG~l 177 (177)
T 1mzw_A 166 KLPVVISQCGEM 177 (177)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCEEEEeceeC
Confidence 999999999987
No 14
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=9.1e-53 Score=335.83 Aligned_cols=168 Identities=65% Similarity=1.087 Sum_probs=158.2
Q ss_pred cccccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCC
Q 028574 32 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLG 111 (207)
Q Consensus 32 ~~~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~ 111 (207)
..|.++++||||+.+++++.|+|+||||++.||++|+||++||++++|. +|+|+.|||++|+|+|||||+..+
T Consensus 7 ~~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~ 79 (185)
T 4fru_A 7 KGPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGF-------GYKDSKFHRVIKDFMIQGGDFTRG 79 (185)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC-------CSTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCC-------eEcCCEEEEeeCCCeEEECCCCCC
Confidence 4578999999999999999999999999999999999999999876542 699999999999999999999888
Q ss_pred CCCCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CC
Q 028574 112 DGRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QN 190 (207)
Q Consensus 112 ~~~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~ 190 (207)
++.++.++++..+++|+..++|+++|+|+|++.++++++|||||++++.++||++|+|||||++|||||++|+..++ ++
T Consensus 80 ~g~gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~ 159 (185)
T 4fru_A 80 DGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGR 159 (185)
T ss_dssp SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTT
T ss_pred CCCCCccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999998775 46
Q ss_pred CCcccceEEeeeeeec
Q 028574 191 GTPKSKVVVADSGELP 206 (207)
Q Consensus 191 ~~P~~~i~I~~cg~l~ 206 (207)
++|.++|+|.+||+|.
T Consensus 160 ~~P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 160 DKPLKDVTIADCGKIE 175 (185)
T ss_dssp SCBSSCEEEEEEEEEE
T ss_pred CcCCCCEEEEEceEEe
Confidence 8999999999999985
No 15
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.4e-52 Score=335.04 Aligned_cols=168 Identities=64% Similarity=1.101 Sum_probs=157.0
Q ss_pred ccccccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCccc-ccCCEEEEeecCceeEeccCC
Q 028574 31 QNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLH-YKGSTFHRIIPSFMLQGGDFT 109 (207)
Q Consensus 31 ~~~~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~-Y~g~~f~rv~~~~~iq~G~~~ 109 (207)
...+.+++++|||+.+++|+.|+|+||||++.||++|+||++||+|++| | |+|+.||||+|+|||||||+.
T Consensus 9 ~~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~FhRvi~~f~iQgGd~~ 80 (188)
T 3ich_A 9 KKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG--------FGYKNSKFHRVIKDFMIQGGDFT 80 (188)
T ss_dssp CCSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS--------CSSTTCBCCEEETTTEEEECCTT
T ss_pred CCCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC--------ccccCCEEEEEECCCEEEcCCcc
Confidence 3456789999999999999999999999999999999999999987665 6 999999999999999999977
Q ss_pred CCCCCCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCC
Q 028574 110 LGDGRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ 189 (207)
Q Consensus 110 ~~~~~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~ 189 (207)
.+++.+++++|+..+++|+..++|+++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|++.++.
T Consensus 81 ~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~ 160 (188)
T 3ich_A 81 RGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTD 160 (188)
T ss_dssp TSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC
T ss_pred CCCCCCCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcC
Confidence 78888999999999999988999999999999999999999999999999999999999999999999999999987755
Q ss_pred -CCCcccceEEeeeeeec
Q 028574 190 -NGTPKSKVVVADSGELP 206 (207)
Q Consensus 190 -~~~P~~~i~I~~cg~l~ 206 (207)
+++|.++|+|.+||+|.
T Consensus 161 ~~~~P~~~v~I~~~~~l~ 178 (188)
T 3ich_A 161 SRDKPLKDVIIADCGKIE 178 (188)
T ss_dssp TTSCBSSCEEEEEEEEEE
T ss_pred CCCeECCCEEEEEeEEEe
Confidence 46999999999999984
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=6.6e-52 Score=332.38 Aligned_cols=165 Identities=60% Similarity=0.976 Sum_probs=156.1
Q ss_pred ccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCC
Q 028574 35 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGR 114 (207)
Q Consensus 35 ~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 114 (207)
..++++|||+.+++|+.|+|+||||++.||++|+||++||++++|+ .|+|+.||||+|+|+|||||+..+++.
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 97 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGE-------GYKGSTFHRIIPGFMVQGGDYTAHNGT 97 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTS-------SSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCC-------cccCCEEEEEeCCCEEEeCCCCCCCCc
Confidence 5678999999999999999999999999999999999999877652 299999999999999999998878889
Q ss_pred CCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCcc
Q 028574 115 GGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPK 194 (207)
Q Consensus 115 ~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P~ 194 (207)
++.++++..+++|+..++|+++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|++.++++++|.
T Consensus 98 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~ 177 (193)
T 3k2c_A 98 GGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVK 177 (193)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCC
T ss_pred CCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred --cceEEeeeeeec
Q 028574 195 --SKVVVADSGELP 206 (207)
Q Consensus 195 --~~i~I~~cg~l~ 206 (207)
++|+|.+||+|+
T Consensus 178 ~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 178 KGYRIEIRDCGVLG 191 (193)
T ss_dssp TTCCEEEEEEEECC
T ss_pred cCccEEEEEceEeC
Confidence 999999999985
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5e-51 Score=333.96 Aligned_cols=169 Identities=47% Similarity=0.846 Sum_probs=157.7
Q ss_pred ccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCC
Q 028574 35 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGR 114 (207)
Q Consensus 35 ~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~ 114 (207)
+.+++||||+.+++++.|+|+||||++.||++|+||++||+++++.+ ++..+|+|+.||||+|+|||||||+..+++.
T Consensus 57 ~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~ 134 (229)
T 1z81_A 57 PSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHNGS 134 (229)
T ss_dssp TTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSSSC
T ss_pred CCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCCCC
Confidence 35789999999999999999999999999999999999998876543 4566899999999999999999999878889
Q ss_pred CCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEE--eCHHHHHHHHhCCCCC--
Q 028574 115 GGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQN-- 190 (207)
Q Consensus 115 ~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi--~G~~vld~I~~~~~~~-- 190 (207)
+++++|+..+++|+..++|.++|+|+||+.++++++|||||++++.++||++|+|||||+ +|||||++|++.++.+
T Consensus 135 Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~ 214 (229)
T 1z81_A 135 GSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYI 214 (229)
T ss_dssp CCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTT
T ss_pred CCCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999877655
Q ss_pred CCcccceEEeeeeee
Q 028574 191 GTPKSKVVVADSGEL 205 (207)
Q Consensus 191 ~~P~~~i~I~~cg~l 205 (207)
++|.++|+|.+||+|
T Consensus 215 ~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 215 YKPKIPINVVECGEL 229 (229)
T ss_dssp CCBSSCEEEEEEEEC
T ss_pred CCCCCCeEEEeCeeC
Confidence 899999999999987
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.7e-51 Score=323.62 Aligned_cols=161 Identities=61% Similarity=1.057 Sum_probs=121.8
Q ss_pred cCceEEEEEEEC--C---eeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCccc-ccCCEEEEeecCceeEeccCC
Q 028574 36 ITNKVYFDVEIA--G---KPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLH-YKGSTFHRIIPSFMLQGGDFT 109 (207)
Q Consensus 36 ~~~~~~~di~~~--~---t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~-Y~g~~f~rv~~~~~iq~G~~~ 109 (207)
++ ++||||+++ + |++|+|+||||++.||++|+||++||++++| + |+|+.|||++|+|||||||+.
T Consensus 2 it-~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g--------~~Y~g~~fhRvi~~f~iQgGd~~ 72 (172)
T 2c3b_A 2 MS-QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG--------EGYRESTFHRIIPNFMIQGGDFT 72 (172)
T ss_dssp CC-CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT--------TSSTTCBCCEEETTTEEEECC--
T ss_pred ce-EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCC--------cccCCCEEEEEeCCCEEEeCCcC
Confidence 45 899999998 6 5559999999999999999999999987765 4 999999999999999999976
Q ss_pred CCCCCCCccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEe--CHHHHHHHHhCC
Q 028574 110 LGDGRGGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS--GMDVVYKVEAEG 187 (207)
Q Consensus 110 ~~~~~~~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~--G~~vld~I~~~~ 187 (207)
.+++.+++++|+..+++|+..++|+++|+|+||+.+|++++|||||++++.++||++|+|||||++ |||||++|++.+
T Consensus 73 ~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~ 152 (172)
T 2c3b_A 73 RGNGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALG 152 (172)
T ss_dssp --------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTC
T ss_pred CCCCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCC
Confidence 688888999999999999888999999999999999999999999999999999999999999999 999999999888
Q ss_pred CCCC--CcccceEEeeeeee
Q 028574 188 RQNG--TPKSKVVVADSGEL 205 (207)
Q Consensus 188 ~~~~--~P~~~i~I~~cg~l 205 (207)
++++ +|.++|+|.+||+|
T Consensus 153 t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 153 SSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp CTTSCCCSSSCCEEEEEEEC
T ss_pred CCCCCccCCCCeEEEeCeeC
Confidence 7665 99999999999986
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1e-48 Score=322.04 Aligned_cols=173 Identities=27% Similarity=0.434 Sum_probs=147.0
Q ss_pred cccccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCC------CC----CCcccccCCEEEEeecCc
Q 028574 32 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG------KS----GKPLHYKGSTFHRIIPSF 101 (207)
Q Consensus 32 ~~~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~------~~----~k~~~Y~g~~f~rv~~~~ 101 (207)
+....++++|||+.+++|+.|+|+||||++.||++|+||++||++++.+- +. |+...|+|+.||||+++|
T Consensus 9 p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~F 88 (234)
T 2ose_A 9 PNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNN 88 (234)
T ss_dssp CCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTT
T ss_pred CcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCC
Confidence 34456789999999999999999999999999999999999998762221 00 121239999999999999
Q ss_pred eeEeccCCCCCCCCCccccCCC-----CCCCCCCCccCCCcEEEeee----cCCCCCCceEEEecCC------CCCCCCC
Q 028574 102 MLQGGDFTLGDGRGGESIYGEK-----FPDENFKLKHTGPGLLSMAN----AGPDTNGSQFFITTVT------TSWLDGR 166 (207)
Q Consensus 102 ~iq~G~~~~~~~~~~~~~~~~~-----~~~e~~~~~h~~~G~v~~~~----~~~~~~~sqF~I~l~~------~~~ld~~ 166 (207)
||||||+..+++.+++++|+.. ++ ...++|.++|+||||+ .++++++|||||++++ .++||++
T Consensus 89 miQgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~ 166 (234)
T 2ose_A 89 YIVSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRD 166 (234)
T ss_dssp EEEECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTT
T ss_pred EEEcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCC
Confidence 9999997778888999998877 55 3478898999999999 8999999999999999 8999999
Q ss_pred ccEEEEEEeCHHHHHHHHhCCC-CCCCcccceEEeeeeeec
Q 028574 167 HVVFGKVLSGMDVVYKVEAEGR-QNGTPKSKVVVADSGELP 206 (207)
Q Consensus 167 ~~vfG~Vi~G~~vld~I~~~~~-~~~~P~~~i~I~~cg~l~ 206 (207)
|+|||||++|||||++|++.++ ++++|.++|+|.+||+|+
T Consensus 167 ~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~ 207 (234)
T 2ose_A 167 QVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYL 207 (234)
T ss_dssp SEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECC
T ss_pred eeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEec
Confidence 9999999999999999997665 449999999999999985
No 20
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=3.5e-48 Score=338.52 Aligned_cols=170 Identities=63% Similarity=1.049 Sum_probs=161.0
Q ss_pred CceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCC-CCcccccCCEEEEeecCceeEeccCCCCCCCC
Q 028574 37 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRG 115 (207)
Q Consensus 37 ~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~-~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~ 115 (207)
+++||||+.+++++.|+|+||||++.||+||+||++||++++|++.. |+..+|+|+.||||+|+|||||||+..++|.+
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 78999999999999999999999999999999999999998887643 56678999999999999999999999888999
Q ss_pred CccccCCCCCCCCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCccc
Q 028574 116 GESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKS 195 (207)
Q Consensus 116 ~~~~~~~~~~~e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P~~ 195 (207)
++++|+..+++|+..++|+++|+|+|++.+|++++|||||++++.|+||++|+|||+|++||+|+++|+..++..++|..
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988766699999
Q ss_pred ceEEeeeeeec
Q 028574 196 KVVVADSGELP 206 (207)
Q Consensus 196 ~i~I~~cg~l~ 206 (207)
+|+|.+||++.
T Consensus 175 ~v~I~~~g~l~ 185 (370)
T 1ihg_A 175 LCVIAECGELK 185 (370)
T ss_dssp CEEEEEEEEEC
T ss_pred eEEEEEEEEec
Confidence 99999999984
No 21
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=4e-47 Score=303.81 Aligned_cols=163 Identities=42% Similarity=0.655 Sum_probs=142.0
Q ss_pred cccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCC--C---CcccccCCEEEEeecCceeEeccC
Q 028574 34 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS--G---KPLHYKGSTFHRIIPSFMLQGGDF 108 (207)
Q Consensus 34 ~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~--~---k~~~Y~g~~f~rv~~~~~iq~G~~ 108 (207)
+..+.++.++ |+.|+|+||||++.||++|+||++||+|++++... + +.+||+|+.||||+|+|||||||+
T Consensus 20 ~~~~~~v~l~-----t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~ 94 (191)
T 1w74_A 20 PLATATATLH-----TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP 94 (191)
T ss_dssp -CCSEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT
T ss_pred CCCCeEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC
Confidence 3344455554 77999999999999999999999999999876421 2 357999999999999999999997
Q ss_pred CCCCCCCCccccCCCCCCCC-CCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEe--CHHHHHHHHh
Q 028574 109 TLGDGRGGESIYGEKFPDEN-FKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS--GMDVVYKVEA 185 (207)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~e~-~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~--G~~vld~I~~ 185 (207)
. +++.++ ++..+++|. ..++|+++|+|+||+.+|++++|||||++++.|+||++|+|||||++ |||||++|++
T Consensus 95 ~-g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~ 170 (191)
T 1w74_A 95 T-GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISK 170 (191)
T ss_dssp T-SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHT
T ss_pred C-CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHc
Confidence 5 566665 477899994 58899999999999999999999999999999999999999999999 9999999998
Q ss_pred CCC-CCCCcccceEEeeeeee
Q 028574 186 EGR-QNGTPKSKVVVADSGEL 205 (207)
Q Consensus 186 ~~~-~~~~P~~~i~I~~cg~l 205 (207)
.++ ++++|.++|+|.+|+++
T Consensus 171 ~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 171 TATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp SCBCTTSCBSSCCEEEEEEEC
T ss_pred CCcCCCCCcCCCeEEEEEEEC
Confidence 775 56999999999999974
No 22
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=2.4e-47 Score=297.80 Aligned_cols=147 Identities=44% Similarity=0.723 Sum_probs=136.6
Q ss_pred eeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCCCCCCCC
Q 028574 49 KPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFPDEN 128 (207)
Q Consensus 49 t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 128 (207)
|+.|+|+||||++.||++|+||++||+ .+||+|+.|||++|+|+|||||+. +++.+++++|+..+++|.
T Consensus 12 T~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 80 (160)
T 2fu0_A 12 TTMGDIHISLFYKECKKTVQNFSVHSI----------NGYYNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEFEDEF 80 (160)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCC
T ss_pred ecCccEEEEEeCCCChHHHHHHHHHhc----------cCccCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCccccc
Confidence 779999999999999999999999994 338999999999999999999986 678888999999999998
Q ss_pred C-CCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCCcccceEEeeeeeec
Q 028574 129 F-KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGTPKSKVVVADSGELP 206 (207)
Q Consensus 129 ~-~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~P~~~i~I~~cg~l~ 206 (207)
. .++|.++|+|+||+.+|++++|||||++++.|+||++|+|||||++|||||++|++.++ ++++|.++|+|.+|.+++
T Consensus 81 ~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~~ 160 (160)
T 2fu0_A 81 FDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKINN 160 (160)
T ss_dssp BTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC-
T ss_pred cCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEeC
Confidence 7 68998899999999999999999999999999999999999999999999999998775 469999999999998864
No 23
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=3.6e-47 Score=298.44 Aligned_cols=152 Identities=49% Similarity=0.842 Sum_probs=139.6
Q ss_pred ceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCc
Q 028574 38 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGE 117 (207)
Q Consensus 38 ~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~ 117 (207)
.++.++ |+.|+|+||||++.||++|+||++||+ .+||+|+.|||++|+|+|||||+. +++.+++
T Consensus 12 ~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~ 75 (166)
T 2x7k_A 12 PNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR----------RGYYNGTKFHRIIKDFMIQGGDPT-GTGRGGA 75 (166)
T ss_dssp SEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH----------HTTTTTEECCEEETTTEEEECCTT-SSSSCCC
T ss_pred CEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHHh----------cCCCCCCEEEEEECCCEEEcCCCC-CCCCCCC
Confidence 556665 779999999999999999999999994 348999999999999999999987 6788889
Q ss_pred cccCCCCCCCCC-CCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCCccc
Q 028574 118 SIYGEKFPDENF-KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGTPKS 195 (207)
Q Consensus 118 ~~~~~~~~~e~~-~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~P~~ 195 (207)
++|+..+++|.. .++|.++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|+..++ ++++|.+
T Consensus 76 si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~ 155 (166)
T 2x7k_A 76 SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVD 155 (166)
T ss_dssp CTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSS
T ss_pred ccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCC
Confidence 999999999984 78998899999999999999999999999999999999999999999999999997775 4489999
Q ss_pred ceEEeeeeee
Q 028574 196 KVVVADSGEL 205 (207)
Q Consensus 196 ~i~I~~cg~l 205 (207)
+|+|.+|.++
T Consensus 156 ~i~I~~~~i~ 165 (166)
T 2x7k_A 156 DVKIIKAYPS 165 (166)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 9999999876
No 24
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=3.3e-47 Score=297.46 Aligned_cols=147 Identities=46% Similarity=0.697 Sum_probs=136.8
Q ss_pred eeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCCCCCCCC
Q 028574 49 KPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFPDEN 128 (207)
Q Consensus 49 t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 128 (207)
|+.|+|+||||++.||++|+||++||++ +||+|+.|||++|+|+|||||+. +++.+++++|+..+++|.
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~----------g~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 75 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCAS----------NYYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEY 75 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHT----------TTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhh----------cccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCcccccc
Confidence 7899999999999999999999999943 37999999999999999999987 678888899999999997
Q ss_pred C-CCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCC--CCcccceEEeeeeee
Q 028574 129 F-KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQN--GTPKSKVVVADSGEL 205 (207)
Q Consensus 129 ~-~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~--~~P~~~i~I~~cg~l 205 (207)
. .++|+++|+||||+.++++++|||||++++.++||++|+|||||++|||||++|++.++.+ ++|.++|+|.+|.++
T Consensus 76 ~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~ 155 (161)
T 2ok3_A 76 SEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIH 155 (161)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEE
T ss_pred CcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEe
Confidence 5 6889899999999999999999999999999999999999999999999999999877544 899999999999987
Q ss_pred c
Q 028574 206 P 206 (207)
Q Consensus 206 ~ 206 (207)
+
T Consensus 156 ~ 156 (161)
T 2ok3_A 156 A 156 (161)
T ss_dssp C
T ss_pred c
Confidence 4
No 25
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=3.5e-47 Score=303.11 Aligned_cols=152 Identities=41% Similarity=0.668 Sum_probs=139.2
Q ss_pred EEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCC
Q 028574 43 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGE 122 (207)
Q Consensus 43 di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~ 122 (207)
++.+. |+.|+|+||||++.||++|+||++||+. +||+|+.||||+|+|||||||+. +++.+++++|+.
T Consensus 18 ~v~i~-t~~G~i~ieL~~~~aP~t~~NF~~L~~~----------g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~ 85 (185)
T 2poe_A 18 GVRII-TNYGDLKFELFCSQCPKACKNFLALSAS----------GYYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGR 85 (185)
T ss_dssp EEEEE-ETTEEEEEEECTTTCHHHHHHHHHHHHT----------TTTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBS
T ss_pred EEEEE-ecCccEEEEEeCCCCcHHHHHHHHHhcc----------CCCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCC
Confidence 33344 7899999999999999999999999943 38999999999999999999987 778888899999
Q ss_pred CCCCCC-CCCccCCCcEEEeeecC----CCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCCcccc
Q 028574 123 KFPDEN-FKLKHTGPGLLSMANAG----PDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGTPKSK 196 (207)
Q Consensus 123 ~~~~e~-~~~~h~~~G~v~~~~~~----~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~P~~~ 196 (207)
.+++|. ..++|+++|+|+||+.+ |++++|||||++++.++||++|+|||||++|||||++|++.++ ++++|.++
T Consensus 86 ~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~ 165 (185)
T 2poe_A 86 YFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDE 165 (185)
T ss_dssp CBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSC
T ss_pred cccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCC
Confidence 999997 67899899999999998 9999999999999999999999999999999999999998765 55899999
Q ss_pred eEEeeeeeec
Q 028574 197 VVVADSGELP 206 (207)
Q Consensus 197 i~I~~cg~l~ 206 (207)
|+|.+|++++
T Consensus 166 v~I~~~~i~~ 175 (185)
T 2poe_A 166 IIIKDIVIHS 175 (185)
T ss_dssp CEEEEEEEEC
T ss_pred eEEEEEEEEC
Confidence 9999999984
No 26
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.9e-47 Score=302.83 Aligned_cols=147 Identities=43% Similarity=0.748 Sum_probs=136.7
Q ss_pred eeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCCCCCCCC
Q 028574 49 KPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFPDEN 128 (207)
Q Consensus 49 t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 128 (207)
|+.|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|||||||+. +++.+++++|+..+++|.
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE~ 94 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLCK----------KHYYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDEF 94 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHHh----------cCCCCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 669999999999999999999999994 338999999999999999999987 678888999999999995
Q ss_pred -CCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCC--CCcccceEEeeeeee
Q 028574 129 -FKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQN--GTPKSKVVVADSGEL 205 (207)
Q Consensus 129 -~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~--~~P~~~i~I~~cg~l 205 (207)
..++|+.+|+|+||+.++++++|||||++++.++||++|+|||+|++|||||++|+..++.. ++|..+|+|.+|+++
T Consensus 95 ~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~ 174 (197)
T 1zkc_A 95 RPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVF 174 (197)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEE
T ss_pred CcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEE
Confidence 67899899999999999999999999999999999999999999999999999999877644 899999999999998
Q ss_pred c
Q 028574 206 P 206 (207)
Q Consensus 206 ~ 206 (207)
+
T Consensus 175 ~ 175 (197)
T 1zkc_A 175 V 175 (197)
T ss_dssp E
T ss_pred c
Confidence 4
No 27
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-46 Score=297.91 Aligned_cols=145 Identities=48% Similarity=0.750 Sum_probs=135.6
Q ss_pred eeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCCCCCCCC
Q 028574 49 KPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFPDEN 128 (207)
Q Consensus 49 t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 128 (207)
|+.|+|+||||++.||++|+||++||+ .+||+|+.|||++|+|+|||||+. +++.+++++|+..+++|.
T Consensus 28 t~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 96 (176)
T 2a2n_A 28 TSMGDIHTKLFPVECPKTVENFCVHSR----------NGYYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEFEDEF 96 (176)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCC
T ss_pred ecCccEEEEEeCCCChHHHHHHHHHhh----------cCccCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCcccccc
Confidence 789999999999999999999999994 338999999999999999999986 678888999999999998
Q ss_pred C-CCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCCC--CCCcccceEEeeeee
Q 028574 129 F-KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ--NGTPKSKVVVADSGE 204 (207)
Q Consensus 129 ~-~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~--~~~P~~~i~I~~cg~ 204 (207)
. .++|.++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|+..++. +++|.++|+|.+|.+
T Consensus 97 ~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 97 HSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp CTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred ccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 7 689998999999999999999999999999999999999999999999999999987765 799999999999864
No 28
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-46 Score=301.72 Aligned_cols=154 Identities=40% Similarity=0.673 Sum_probs=139.7
Q ss_pred CceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCC
Q 028574 37 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGG 116 (207)
Q Consensus 37 ~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 116 (207)
+.+|.++ |+.|+|+||||++.||++|+||++||+ .+||+|+.|||++|+|+|||||+. +++.++
T Consensus 38 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Y~g~~FhRVi~~f~iQgGd~~-~~g~gg 101 (196)
T 2b71_A 38 RGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLCE----------MGFYDNTIFHRVIPNFVIQGGDPT-GTGKGG 101 (196)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEEEEEEETTTEEEEEETT-SSSSCC
T ss_pred CcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHhh----------cCCcCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 4566666 779999999999999999999999994 338999999999999999999987 778888
Q ss_pred ccccCCCCCCCC-CCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCCcc
Q 028574 117 ESIYGEKFPDEN-FKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGTPK 194 (207)
Q Consensus 117 ~~~~~~~~~~e~-~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~P~ 194 (207)
+++|+..+++|. ..++|+++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|++.++ ++++|.
T Consensus 102 ~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~ 181 (196)
T 2b71_A 102 KSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPI 181 (196)
T ss_dssp CBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBS
T ss_pred CccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCC
Confidence 899999999995 478898999999999999999999999999999999999999999999999999997765 569999
Q ss_pred cceEEeeeeeec
Q 028574 195 SKVVVADSGELP 206 (207)
Q Consensus 195 ~~i~I~~cg~l~ 206 (207)
++|+|.+|.+++
T Consensus 182 ~~i~I~~~~i~~ 193 (196)
T 2b71_A 182 FDLKILRTSTAV 193 (196)
T ss_dssp SCCEEEEEEC--
T ss_pred CCeEEEEEEEec
Confidence 999999999874
No 29
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=2e-46 Score=301.82 Aligned_cols=153 Identities=48% Similarity=0.833 Sum_probs=140.5
Q ss_pred ceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCc
Q 028574 38 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGE 117 (207)
Q Consensus 38 ~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~ 117 (207)
.++.++ |++|+|+||||++.||++|+||++||+ .+||+++.||||+|+|+|||||+. +++.+++
T Consensus 12 ~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~----------~g~Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~ 75 (203)
T 2k7n_A 12 PNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR----------RGYYNGTKFHRIIKDFMIQGGDPT-GTGRGGA 75 (203)
T ss_dssp SEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHHH----------HTCGGGCEEEEEETTTEEEEECSS-SSSSCCC
T ss_pred CEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHHh----------cCccCCCEEEEEeCCcEEEcCCCC-CCCCCCC
Confidence 566666 779999999999999999999999994 348999999999999999999987 6778888
Q ss_pred cccCCCCCCCCC-CCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHhCCC-CCCCccc
Q 028574 118 SIYGEKFPDENF-KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGR-QNGTPKS 195 (207)
Q Consensus 118 ~~~~~~~~~e~~-~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~-~~~~P~~ 195 (207)
++|+..+++|.. .++|.++|+|+||+.++++++|||||++++.++||++|+|||||++|||||++|+..++ ++++|.+
T Consensus 76 si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~ 155 (203)
T 2k7n_A 76 SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVD 155 (203)
T ss_dssp TTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECC
T ss_pred ccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCC
Confidence 999999999984 78998899999999999999999999999999999999999999999999999997764 4589999
Q ss_pred ceEEeeeeeec
Q 028574 196 KVVVADSGELP 206 (207)
Q Consensus 196 ~i~I~~cg~l~ 206 (207)
+|+|.+|++++
T Consensus 156 ~V~I~~~~v~~ 166 (203)
T 2k7n_A 156 DVKIIKAYPSG 166 (203)
T ss_dssp CCBEEEEEECC
T ss_pred CeEEEEEEEEe
Confidence 99999999985
No 30
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-46 Score=300.46 Aligned_cols=154 Identities=32% Similarity=0.530 Sum_probs=133.3
Q ss_pred eEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEec-----cCCCCCC
Q 028574 39 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGG-----DFTLGDG 113 (207)
Q Consensus 39 ~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G-----~~~~~~~ 113 (207)
+.++.+. |+.|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|||||| |+. +++
T Consensus 6 ~~~v~l~---T~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g 71 (201)
T 3bo7_A 6 KGYLRIV---TTQGSLNIELHADMAPRACDSFLRLCA----------VKYFDDTIFHRCIRNFMIQGGRAELRQPS-KKK 71 (201)
T ss_dssp CEEEEEE---ETTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBEEEEETTTEEEECCGGGCCC-----
T ss_pred ceEEEEE---eCCCCEEEEEcCCCCcHHHHHHHHHHh----------cCccCCCEEEEeeCCCEEEcCcccccCCC-CCC
Confidence 3444444 668999999999999999999999994 338999999999999999999 887 677
Q ss_pred CCCcccc-------CCCCCCCC-CCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHHHHHHh
Q 028574 114 RGGESIY-------GEKFPDEN-FKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 185 (207)
Q Consensus 114 ~~~~~~~-------~~~~~~e~-~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vld~I~~ 185 (207)
.+++++| +..+++|. ..++|+.+|+|+||+.++++++|||||++++.++||++|+|||+|++|||||++|+.
T Consensus 72 ~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~ 151 (201)
T 3bo7_A 72 EVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEK 151 (201)
T ss_dssp ---CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTT
T ss_pred CCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHh
Confidence 8888888 78899995 678898999999999999999999999999999999999999999999999999997
Q ss_pred CCC-CCCCcccceEEeeeeeec
Q 028574 186 EGR-QNGTPKSKVVVADSGELP 206 (207)
Q Consensus 186 ~~~-~~~~P~~~i~I~~cg~l~ 206 (207)
.++ ++++|.++|+|.+|++|+
T Consensus 152 ~~t~~~~~P~~~i~I~~~~v~~ 173 (201)
T 3bo7_A 152 LETDKKDKPLKPPKVEEIIVFK 173 (201)
T ss_dssp CCBCTTSCBSSCCBEEEEEEEE
T ss_pred CCcCCCCCcCCCeEEEEEEEEc
Confidence 765 458999999999999984
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3.7e-45 Score=291.25 Aligned_cols=156 Identities=39% Similarity=0.674 Sum_probs=140.4
Q ss_pred cccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCC
Q 028574 34 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDG 113 (207)
Q Consensus 34 ~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~ 113 (207)
++.+++|+++ |++|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|+|||||+. +++
T Consensus 21 ~~~~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~-~~g 84 (185)
T 2hq6_A 21 PPTNGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPT-GTG 84 (185)
T ss_dssp CCCBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHH----------TTTTTTEECCEEETTTEEEECCTT-SSS
T ss_pred CCCCCEEEEE-----eCCccEEEEEeCCCCcHHHHHHHHHhh----------cCccCCCEEEEEECCCEEEcCCCC-CCC
Confidence 4566788887 679999999999999999999999994 338999999999999999999986 678
Q ss_pred CCCccccCCCCCCCCC-CCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEeCHHHH--HHHHhCC-CC
Q 028574 114 RGGESIYGEKFPDENF-KLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVV--YKVEAEG-RQ 189 (207)
Q Consensus 114 ~~~~~~~~~~~~~e~~-~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~G~~vl--d~I~~~~-~~ 189 (207)
.+++++|+..+++|.. .++|+++|+|+||+.++++++|||||++++.++||++|+|||||+ |++++ ++|+..+ ++
T Consensus 85 ~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~ 163 (185)
T 2hq6_A 85 SGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDD 163 (185)
T ss_dssp SCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCT
T ss_pred CCCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCC
Confidence 8888999999999986 688889999999999999999999999999999999999999999 88875 5777655 46
Q ss_pred CCCcccceEEeeeeeec
Q 028574 190 NGTPKSKVVVADSGELP 206 (207)
Q Consensus 190 ~~~P~~~i~I~~cg~l~ 206 (207)
+++|.++|+|.+|++++
T Consensus 164 ~~~P~~~v~I~~~~v~~ 180 (185)
T 2hq6_A 164 DERPHNPHKIKSCEVLF 180 (185)
T ss_dssp TSCBSSCCEEEEEEEEE
T ss_pred CCCCCCCeEEEEEEEeC
Confidence 79999999999999984
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=5.3e-45 Score=286.39 Aligned_cols=152 Identities=32% Similarity=0.500 Sum_probs=132.2
Q ss_pred CceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCC
Q 028574 37 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGG 116 (207)
Q Consensus 37 ~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~ 116 (207)
+++++++ |+.|+|+||||++.||++|+||++||+ .+||+|+.||||+|+|||||||+....+
T Consensus 4 ~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~~--- 65 (166)
T 1v9t_A 4 DPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYVN----------SGFYNNTTFHRVIPGFMIQGGGFTEQMQ--- 65 (166)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH----------TTTTTTCBEEEEETTTEEEESSBCTTCC---
T ss_pred CeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHhc----------cCCCCCCEEEEEECCcEEEcCCcCcCCC---
Confidence 4567777 789999999999999999999999993 3489999999999999999999874322
Q ss_pred ccccCCCCCCCCCCCccCCCcEEEeeec-CCCCCCceEEEecCCCCCCCCC-----ccEEEEEEeCHHHHHHHHhCCCC-
Q 028574 117 ESIYGEKFPDENFKLKHTGPGLLSMANA-GPDTNGSQFFITTVTTSWLDGR-----HVVFGKVLSGMDVVYKVEAEGRQ- 189 (207)
Q Consensus 117 ~~~~~~~~~~e~~~~~h~~~G~v~~~~~-~~~~~~sqF~I~l~~~~~ld~~-----~~vfG~Vi~G~~vld~I~~~~~~- 189 (207)
...++..+++|.....|+.+|+||||+. +|++++|||||++++.++||++ |+|||+|++|||||++|++.++.
T Consensus 66 ~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~ 145 (166)
T 1v9t_A 66 QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHD 145 (166)
T ss_dssp BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEE
T ss_pred CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 2334677889976555567999999997 5999999999999999999998 99999999999999999987764
Q ss_pred ----CCCcccceEEeeeeeec
Q 028574 190 ----NGTPKSKVVVADSGELP 206 (207)
Q Consensus 190 ----~~~P~~~i~I~~cg~l~ 206 (207)
+++|.++|+|.+|.+++
T Consensus 146 ~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 146 VGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp ETTEEEEESSCCBEEEEEECC
T ss_pred CCccCCCcCCCeEEEEEEEeC
Confidence 37899999999999874
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=5.1e-45 Score=285.96 Aligned_cols=144 Identities=33% Similarity=0.551 Sum_probs=128.6
Q ss_pred eeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCCCCCCCC
Q 028574 49 KPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFPDEN 128 (207)
Q Consensus 49 t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 128 (207)
|+.|+|+||||++.||++|+||++||+ .+||+|+.|||++|+|||||||+..+. +.++++..+++|.
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~ 72 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCR----------EGFYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEA 72 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHH----------TTTTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCC
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHh----------cCCCCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccc
Confidence 779999999999999999999999993 348999999999999999999987433 3456788899998
Q ss_pred CC-CccCCCcEEEeeec-CCCCCCceEEEecCCCCCCCCC--------ccEEEEEEeCHHHHHHHHhCCCC-----CCCc
Q 028574 129 FK-LKHTGPGLLSMANA-GPDTNGSQFFITTVTTSWLDGR--------HVVFGKVLSGMDVVYKVEAEGRQ-----NGTP 193 (207)
Q Consensus 129 ~~-~~h~~~G~v~~~~~-~~~~~~sqF~I~l~~~~~ld~~--------~~vfG~Vi~G~~vld~I~~~~~~-----~~~P 193 (207)
.. ++| .+|+||||++ +|++++|||||++++.++||++ |+|||+|++|||||++|++.++. +++|
T Consensus 73 ~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P 151 (164)
T 1lop_A 73 NNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVP 151 (164)
T ss_dssp CSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEE
T ss_pred cccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCc
Confidence 64 555 6999999985 7999999999999999999998 99999999999999999987764 4899
Q ss_pred ccceEEeeeeeec
Q 028574 194 KSKVVVADSGELP 206 (207)
Q Consensus 194 ~~~i~I~~cg~l~ 206 (207)
.++|+|.+|++++
T Consensus 152 ~~~v~I~~~~v~~ 164 (164)
T 1lop_A 152 KEDVIIESVTVSE 164 (164)
T ss_dssp SSCCEEEEEEECC
T ss_pred CCCeEEEEEEEeC
Confidence 9999999999874
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=4.8e-44 Score=281.30 Aligned_cols=144 Identities=31% Similarity=0.483 Sum_probs=126.0
Q ss_pred eeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCCCCCCCC
Q 028574 49 KPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFPDEN 128 (207)
Q Consensus 49 t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 128 (207)
|+.|+|+||||++.||++|+||++||+ .+||+|+.|||++|+|||||||+.... +...++..+++|.
T Consensus 10 T~~G~i~ieL~~~~aP~t~~NF~~L~~----------~g~Y~g~~FhRvi~~f~iQgGd~~~~~---~~~~~~~~~~~E~ 76 (167)
T 3s6m_A 10 TNHGVIKLELDEAKAPKTVENFLNYVK----------KGHYDGTIFHRVINGFMIQGGGFEPGL---KQKPTDAPIANEA 76 (167)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH----------HTTTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCG
T ss_pred eCCceEEEEEeCCCCcHHHHHHHHHhh----------hcccCCCEeEEecCCcEEEeccccCCC---CCCCCCCccCCcc
Confidence 789999999999999999999999994 348999999999999999999987432 2234567788886
Q ss_pred CCCccCCCcEEEeee-cCCCCCCceEEEecCCCCCCCCC--------ccEEEEEEeCHHHHHHHHhCCCC-----CCCcc
Q 028574 129 FKLKHTGPGLLSMAN-AGPDTNGSQFFITTVTTSWLDGR--------HVVFGKVLSGMDVVYKVEAEGRQ-----NGTPK 194 (207)
Q Consensus 129 ~~~~h~~~G~v~~~~-~~~~~~~sqF~I~l~~~~~ld~~--------~~vfG~Vi~G~~vld~I~~~~~~-----~~~P~ 194 (207)
....++.+|+|+||+ .+|++++|||||++++.++||++ |+|||||++|||||++|++.+++ +++|.
T Consensus 77 ~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~ 156 (167)
T 3s6m_A 77 NNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPN 156 (167)
T ss_dssp GGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBS
T ss_pred cccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcC
Confidence 543344799999999 57999999999999999999998 99999999999999999987754 48999
Q ss_pred cceEEeeeeee
Q 028574 195 SKVVVADSGEL 205 (207)
Q Consensus 195 ~~i~I~~cg~l 205 (207)
++|+|.+|.+|
T Consensus 157 ~~v~I~~~~il 167 (167)
T 3s6m_A 157 DDVVIEKAVVV 167 (167)
T ss_dssp SCCEEEEEEEC
T ss_pred CCeEEEEEEEC
Confidence 99999999875
No 35
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=8.6e-44 Score=292.22 Aligned_cols=157 Identities=32% Similarity=0.537 Sum_probs=139.1
Q ss_pred ccccCceEEEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCC
Q 028574 33 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGD 112 (207)
Q Consensus 33 ~~~~~~~~~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~ 112 (207)
.++.+.+|.++ |++|+|+||||++.||++|+||++||+. +||+|+.||||+|+|||||||+. ++
T Consensus 17 ~p~~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~~----------g~Ydgt~FhRVi~~FmiQgGdp~-~~ 80 (232)
T 3bkp_A 17 QGSTRGKVVLH-----TSLGDLDVELWARECPLACRNFVQLCLE----------GYYVNTIFHRVVKDFIVQGGDPT-GT 80 (232)
T ss_dssp CCSCBCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHHH----------TTTTTCBEEEEETTTEEEECCTT-SS
T ss_pred cCCCCCEEEEE-----ECCCcEEEEEcCCCCcHHHHHHHHHhhc----------CccCCCEEEEEeCCCEEEcCCCC-CC
Confidence 34566777777 7799999999999999999999999943 38999999999999999999987 77
Q ss_pred CCCCcccc--CCCCCCCCC-CCccCCCcEEEeeecCC--------------CCCCceEEEecCCCCCCCCCccEEEEEEe
Q 028574 113 GRGGESIY--GEKFPDENF-KLKHTGPGLLSMANAGP--------------DTNGSQFFITTVTTSWLDGRHVVFGKVLS 175 (207)
Q Consensus 113 ~~~~~~~~--~~~~~~e~~-~~~h~~~G~v~~~~~~~--------------~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~ 175 (207)
+.+++++| +..+++|.. .++|+.+|+|+||+.++ ++++|||||++++.++||++|+|||+|+
T Consensus 81 G~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv- 159 (232)
T 3bkp_A 81 GRGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT- 159 (232)
T ss_dssp SSCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-
T ss_pred CCCCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-
Confidence 88888898 888999976 68888999999999986 6999999999999999999999999999
Q ss_pred CHHH--HHHHHhCCC-CCCCcccceEEeeeeeec
Q 028574 176 GMDV--VYKVEAEGR-QNGTPKSKVVVADSGELP 206 (207)
Q Consensus 176 G~~v--ld~I~~~~~-~~~~P~~~i~I~~cg~l~ 206 (207)
||++ +++|+..++ ++++|..+|+|.+|++|+
T Consensus 160 g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~ 193 (232)
T 3bkp_A 160 GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLW 193 (232)
T ss_dssp GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEE
T ss_pred eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEc
Confidence 7765 889997764 678999999999999984
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=1.8e-38 Score=274.73 Aligned_cols=157 Identities=25% Similarity=0.379 Sum_probs=129.9
Q ss_pred cccccccccCceEEEEEEEC-----CeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCce
Q 028574 28 KSDQNLKEITNKVYFDVEIA-----GKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFM 102 (207)
Q Consensus 28 ~~~~~~~~~~~~~~~di~~~-----~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~ 102 (207)
..+...|.++.++++++.+. .++.|+|+||||++.||+||+||++||+ .+||+|+.|||+ ++||
T Consensus 159 ~~y~~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~----------~GfYdGt~FHRV-~gFm 227 (369)
T 3rfy_A 159 EEYRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVE----------RHFYDGMEIQRS-DGFV 227 (369)
T ss_dssp SSCTTSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHH----------TTTTTTEECEEE-EEEE
T ss_pred hhcccCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhh----------cCCcCCCeeeee-CCee
Confidence 45567788888988888775 2358999999999999999999999993 348999999999 9999
Q ss_pred eEeccCCCCCCCC---------------------CccccCCCCCCCC-----CCCccCCCcEEEeeec--CCCCCCceEE
Q 028574 103 LQGGDFTLGDGRG---------------------GESIYGEKFPDEN-----FKLKHTGPGLLSMANA--GPDTNGSQFF 154 (207)
Q Consensus 103 iq~G~~~~~~~~~---------------------~~~~~~~~~~~e~-----~~~~h~~~G~v~~~~~--~~~~~~sqF~ 154 (207)
|||||+. +++.+ +.++|+..+++|+ ..++|+.+|+|+||+. ++++++||||
T Consensus 228 IQgGDp~-g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFF 306 (369)
T 3rfy_A 228 VQTGDPE-GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVF 306 (369)
T ss_dssp ECCCCCC-CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCC
T ss_pred EecCCCC-CCCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEE
Confidence 9999987 44443 2345556666654 2578889999999997 7999999999
Q ss_pred Eec-------CCCCCCCCCccEEEEEEeCHHHHHHHHhCCCCCCCcccceEEee
Q 028574 155 ITT-------VTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVAD 201 (207)
Q Consensus 155 I~l-------~~~~~ld~~~~vfG~Vi~G~~vld~I~~~~~~~~~P~~~i~I~~ 201 (207)
|++ ++.++||++|+|||+|++|||||++|+. +.....|+|.+
T Consensus 307 Itl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~-----GD~I~sv~I~~ 355 (369)
T 3rfy_A 307 WLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKV-----GDVIESIQVVS 355 (369)
T ss_dssp CCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCT-----TCEEEEEEEEE
T ss_pred EEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhC-----CCceEEEEEec
Confidence 999 4689999999999999999999999986 34456666665
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=96.28 E-value=0.039 Score=42.73 Aligned_cols=118 Identities=15% Similarity=0.176 Sum_probs=69.1
Q ss_pred EEEEEEECCeeee-eEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecC--ceeEeccCCCCCCCCC
Q 028574 40 VYFDVEIAGKPAG-RIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPS--FMLQGGDFTLGDGRGG 116 (207)
Q Consensus 40 ~~~di~~~~t~~G-~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~--~~iq~G~~~~~~~~~~ 116 (207)
.|++|.+.. .| .++.+|..+.||+||+.|.++. =|.+..+|-..-+ .|+--++..
T Consensus 22 r~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~L-------------P~~~~viHarwSGeeVy~~lp~f~------- 79 (188)
T 3kop_A 22 RYINITLEK--RGVTCKALLLDDVAPRTSKAVWDAL-------------PQSSQVFHGKYARNEIYNLVPAFA------- 79 (188)
T ss_dssp CEEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHC-------------CEEEECEECSSSSSEEEEEEECCS-------
T ss_pred eEEEEEEec--CCeEEEEEEccccChHHHHHHHHhC-------------CCCcceEEEEEecceEEEECCccc-------
Confidence 467777653 34 3889999999999999999987 1444444444333 233333321
Q ss_pred ccccCCCCCCCCCCCccCCCcEEEeeec-----C-------C------CCCCceEEEecCCCCC-CCCC-----ccEEEE
Q 028574 117 ESIYGEKFPDENFKLKHTGPGLLSMANA-----G-------P------DTNGSQFFITTVTTSW-LDGR-----HVVFGK 172 (207)
Q Consensus 117 ~~~~~~~~~~e~~~~~h~~~G~v~~~~~-----~-------~------~~~~sqF~I~l~~~~~-ld~~-----~~vfG~ 172 (207)
....+.|+.... ..+|-|++-.. + + .....++.|-.+.... ++++ -.+|++
T Consensus 80 ----~~~~g~EN~T~~-P~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~T 154 (188)
T 3kop_A 80 ----PKEPGAENTTVT-PIPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFAT 154 (188)
T ss_dssp ----SSCCCSCSEESS-CCTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEE
T ss_pred ----ccCCCcCCCCCC-CCCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEE
Confidence 012344555432 24788776311 1 0 1112467776665442 2222 379999
Q ss_pred EEeCHHHHHHHH
Q 028574 173 VLSGMDVVYKVE 184 (207)
Q Consensus 173 Vi~G~~vld~I~ 184 (207)
|++|+|-|.++-
T Consensus 155 IveGle~la~~c 166 (188)
T 3kop_A 155 IVEGLDEMAAAC 166 (188)
T ss_dssp EEESHHHHHHHH
T ss_pred EecCHHHHHHHH
Confidence 999999887764
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=95.02 E-value=0.029 Score=42.53 Aligned_cols=106 Identities=15% Similarity=0.127 Sum_probs=61.7
Q ss_pred EEEEEECCeeeeeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCcccc
Q 028574 41 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIY 120 (207)
Q Consensus 41 ~~di~~~~t~~G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~ 120 (207)
-+.|.+++ ..++++|+.+.||++|+.|+++. =+... +.+. .+..+ + +..
T Consensus 31 ~I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~L-------------Pl~~~-~~~~-g~E~y-~-~lp----------- 79 (153)
T 2nnz_A 31 RLRIRFES---AECEVELYEEWAPETVRAIADAL-------------PIKST-ANRW-GDEIY-F-TTQ----------- 79 (153)
T ss_dssp CEEEEETT---EEEEECCCTTSCHHHHHHHHHTC-------------SEEEE-EEEE-TTEEE-E-CCS-----------
T ss_pred EEEEEECC---EEEEEEEcCCCCHHHHHHHHHhC-------------CcEEE-HHhh-CCcEE-E-ECC-----------
Confidence 35566675 67999999999999999999987 02222 1121 11100 0 000
Q ss_pred CCCCCC-CCCCCccCCCcEEEeeecCCCCCCceEEEecCCCCCCCC------CccEEEEEEeCHHHHHHHH
Q 028574 121 GEKFPD-ENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDG------RHVVFGKVLSGMDVVYKVE 184 (207)
Q Consensus 121 ~~~~~~-e~~~~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~------~~~vfG~Vi~G~~vld~I~ 184 (207)
..++. |+.. .....|-|+.-..+. .+.|-.++.|...+ .-.+||+|.+|++.|.++.
T Consensus 80 -~~l~~~en~~-~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 80 -VAVEKEENSK-DVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp -CCCCCSSCCB-CCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred -CCCCCCCCCc-ccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 00111 2222 233578888755433 37777777653322 2478999999977776543
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=80.50 E-value=4.9 Score=29.52 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=54.8
Q ss_pred eeEEEEEeCCCCchhHHHHHHHhcCCCCCCCCCCcccccCCEEEEeecCceeEeccCCCCCCCCCccccCCCCC-CCCCC
Q 028574 52 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFP-DENFK 130 (207)
Q Consensus 52 G~ivieL~~~~aP~~~~nF~~l~~~~~g~~~~~k~~~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~-~e~~~ 130 (207)
..++.+|+.. |.|++.|++.. ........|. ..++-..|.. ++ +|+..
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~L------Pl~~~~~~~g-~E~y~~~p~~----------------------l~~~e~~~ 70 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKI------PFESVVNTWG-EEIYFSTPVN----------------------VQKMENPR 70 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHC------SEEEECEESS-SEEEEECSCC----------------------CCCCSSEE
T ss_pred cEEEEEEcCC--HHHHHHHHHHC------CcEEEHHHhC-CcEEEECCcc----------------------CCCCCCCC
Confidence 6799999754 88999999987 1111222342 2322222211 11 11111
Q ss_pred CccCCCcEEEeeecCCCCCCceEEEecCCCCCCCC------CccEEEEEEeCHHHHHHHH
Q 028574 131 LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDG------RHVVFGKVLSGMDVVYKVE 184 (207)
Q Consensus 131 ~~h~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~------~~~vfG~Vi~G~~vld~I~ 184 (207)
.-...|-|+.-..+. -|.|-.++.|...+ .-.+||||.+|++.|.++.
T Consensus 71 -~~~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 71 -EVVEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp -SSBCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred -ccCCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 113468888765543 37777777754332 3689999999977665543
No 40
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=34.06 E-value=18 Score=26.77 Aligned_cols=15 Identities=33% Similarity=0.585 Sum_probs=12.0
Q ss_pred CCeeeeeEEEEEeCC
Q 028574 47 AGKPAGRIVMGLFGK 61 (207)
Q Consensus 47 ~~t~~G~ivieL~~~ 61 (207)
.|++...|.|+|+..
T Consensus 41 ~G~PA~gv~V~L~~~ 55 (147)
T 4ank_A 41 RGSPAINVAVHVFRK 55 (147)
T ss_dssp TTEECCSCEEEEEEE
T ss_pred CCcCCCCCEEEEEEE
Confidence 568888899999853
No 41
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=28.28 E-value=24 Score=27.17 Aligned_cols=7 Identities=29% Similarity=0.183 Sum_probs=0.0
Q ss_pred CCcCchH
Q 028574 1 MASTNLL 7 (207)
Q Consensus 1 ~~~~~~~ 7 (207)
|++..++
T Consensus 1 Mmk~~~~ 7 (259)
T 4dz1_A 1 MLSKKFG 7 (259)
T ss_dssp -------
T ss_pred CcHHHHH
Confidence 5444333
No 42
>4i62_A Amino acid ABC transporter, periplasmic amino ACI protein, putative; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases (NIAI niaid; HET: ARG; 1.05A {Streptococcus pneumoniae}
Probab=28.00 E-value=15 Score=28.12 Aligned_cols=12 Identities=25% Similarity=0.371 Sum_probs=0.0
Q ss_pred CCcCchHHHHHH
Q 028574 1 MASTNLLPLTML 12 (207)
Q Consensus 1 ~~~~~~~~~~~~ 12 (207)
|++|+.++++++
T Consensus 2 M~~m~~~~~~~~ 13 (269)
T 4i62_A 2 MNKMKKVLMTMF 13 (269)
T ss_dssp ------------
T ss_pred cHHHHHHHHHHH
Confidence 666666544433
No 43
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=26.09 E-value=38 Score=17.21 Aligned_cols=14 Identities=29% Similarity=0.325 Sum_probs=9.9
Q ss_pred CCCCceEEEecCCC
Q 028574 147 DTNGSQFFITTVTT 160 (207)
Q Consensus 147 ~~~~sqF~I~l~~~ 160 (207)
...-|..||||.+-
T Consensus 7 KR~aSSvFITLapp 20 (26)
T 2k9u_B 7 KRVASSVFITLAPP 20 (26)
T ss_dssp SSCEEEEEEEECCS
T ss_pred hheeeeEEEEecCc
Confidence 34457799999763
No 44
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=20.10 E-value=1e+02 Score=26.37 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=39.3
Q ss_pred CCCcEEEeeecCCCCCCceEEEecCCCCCCCCCccEEEEEEe-CHHHHHHHH
Q 028574 134 TGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKVE 184 (207)
Q Consensus 134 ~~~G~v~~~~~~~~~~~sqF~I~l~~~~~ld~~~~vfG~Vi~-G~~vld~I~ 184 (207)
..+|.|.+.+..-..-..|.-|++.+.| -|++.-|+|+|.+ -+.+|+-|.
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEECGGGGGGGGGCC
T ss_pred ccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEECHHHHHHHHhcC
Confidence 4589999988765555678999999987 5778899999995 566777665
Done!