BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028575
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P96554|Y319_MYXXA Uncharacterized membrane protein STKORF319 OS=Myxococcus xanthus
PE=3 SV=1
Length = 319
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%)
Query: 122 AFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNR 181
A VS A+ FG GV + G +F GY++E+SLSVDN+FVFV+IF ++P +YQ+R
Sbjct: 48 ALWVSLALVFGAGVWWKFGPEPGLQFITGYLIEKSLSVDNIFVFVVIFSALRIPALYQHR 107
Query: 182 VLSYGIAGAIVFRLSLILLGTATL 205
VL +GI A+ R +I G A L
Sbjct: 108 VLFWGILSALALRAIMIFAGVAML 131
>sp|Q52356|TERC_SERMA Tellurium resistance protein TerC OS=Serratia marcescens GN=terC
PE=3 SV=1
Length = 346
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Query: 111 RESYTSSVKTVA----FCVSTAVAFGLGVGFI---EGASKASEFFAGYILEQSLSVDNLF 163
R+ S+K+ A F V A+AF GF+ GA AS F GY LE+ LSVDNLF
Sbjct: 32 RDDKPISLKSAALWSVFWVVVAMAFA---GFLYIHHGAEVASLFVTGYALEKVLSVDNLF 88
Query: 164 VFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQV 207
V + IF +F VP Y++RVL +GI GAIVFR + +GT+ L +
Sbjct: 89 VMMAIFSWFAVPDRYRHRVLYWGIIGAIVFRGIFVAIGTSLLSL 132
>sp|P18780|TERC_ALCSP Tellurium resistance protein TerC OS=Alcaligenes sp. GN=terC PE=3
SV=1
Length = 346
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 123 FCVSTAVAFGLGVGFI---EGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQ 179
F V A+AF GF+ GA AS F GY LE+ LSVDNLFV + IF +F VP Y+
Sbjct: 48 FWVVVAMAFA---GFLYVHHGAEVASLFVTGYALEKVLSVDNLFVMMAIFSWFSVPDRYR 104
Query: 180 NRVLSYGIAGAIVFRLSLILLGTATLQV 207
+R L +GI GAIVFR + +GT L +
Sbjct: 105 HRGLYWGIIGAIVFRGIFVAIGTGLLSL 132
>sp|Q92GA4|Y1219_RICCN Uncharacterized membrane protein RC1219 OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=RC1219 PE=3 SV=1
Length = 301
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 57/86 (66%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ SV F + A FG+ V + GA A E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKESVLFSLFYLVIACLFGIYVYYNTGADHAREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLI 198
K+P YQ+RVL +GI G I+FR +I
Sbjct: 89 KIPWQYQHRVLFFGIIGVIIFRAVMI 114
>sp|P60067|ALX_PHOLL Inner membrane protein alx OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=alx PE=3 SV=1
Length = 320
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 106 RQIEGRESYTSSVKTVAFCVSTAVAFGLG--------VGFIEGASKASEFFAGYILEQSL 157
R+ E S+ + VS ++ F LG VG S+ F GY+LE++L
Sbjct: 30 RKKEQAMSFRQAAVWSVIWVSLSLLFALGLWWYCRETVGVAVANSQVMAFLTGYLLEKAL 89
Query: 158 SVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+VDN+FV++++F YF +P Q RVL YG+ GAIV R +I G+
Sbjct: 90 AVDNVFVWLMLFSYFAIPANLQRRVLIYGVLGAIVLRTVMIFAGS 134
>sp|P0A615|Y2742_MYCBO Uncharacterized membrane protein Mb2742 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2742 PE=3 SV=1
Length = 397
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%)
Query: 125 VSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLS 184
V A+ FG+ V G+ A E+FA Y+ +++LSVDNLFVF++I F VP + Q +VL
Sbjct: 46 VGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLL 105
Query: 185 YGIAGAIVFRLSLILLGTATLQ 206
+GIA A+V R I +G A ++
Sbjct: 106 FGIAFALVTRTGFIFVGAALIE 127
>sp|P0A614|Y2723_MYCTU Uncharacterized membrane protein Rv2723/MT2795 OS=Mycobacterium
tuberculosis GN=Rv2723 PE=3 SV=1
Length = 397
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%)
Query: 125 VSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLS 184
V A+ FG+ V G+ A E+FA Y+ +++LSVDNLFVF++I F VP + Q +VL
Sbjct: 46 VGIAILFGIAVVVFGGSELAVEYFACYLTDEALSVDNLFVFLVIISSFGVPRLAQQKVLL 105
Query: 185 YGIAGAIVFRLSLILLGTATLQ 206
+GIA A+V R I +G A ++
Sbjct: 106 FGIAFALVTRTGFIFVGAALIE 127
>sp|Q4UK32|Y1252_RICFE Uncharacterized membrane protein RF_1252 OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=RF_1252 PE=3 SV=2
Length = 301
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ SV F A FG+ + GA A E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKESVLFSLFYFVIACLFGIYFYYNTGAEHAREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQ 206
K+P YQ+RVL +GI G I+FR +I GT +
Sbjct: 89 KIPGKYQHRVLFFGIIGVIIFRAIMIYGGTILIN 122
>sp|Q8ZLX2|ALX_SALTY Inner membrane protein alx OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=alx PE=3 SV=1
Length = 322
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I GT
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPPALQRRVLVYGVLGAIVLRTIMIFAGT 134
>sp|Q8Z3L5|ALX_SALTI Inner membrane protein alx OS=Salmonella typhi GN=alx PE=3 SV=1
Length = 322
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I GT
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPPALQRRVLVYGVLGAIVLRTIMIFAGT 134
>sp|Q8FDE1|ALX_ECOL6 Inner membrane protein alx OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=alx PE=3 SV=1
Length = 321
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
>sp|P42601|ALX_ECOLI Inner membrane protein alx OS=Escherichia coli (strain K12) GN=alx
PE=1 SV=2
Length = 321
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
>sp|Q83Q35|ALX_SHIFL Inner membrane protein alx OS=Shigella flexneri GN=alx PE=3 SV=1
Length = 320
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
>sp|Q8XAJ0|ALX_ECO57 Inner membrane protein alx OS=Escherichia coli O157:H7 GN=alx PE=3
SV=1
Length = 321
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGT 202
+A F GY++E+SL+VDN+FV++++F YF VP Q RVL YG+ GAIV R +I G+
Sbjct: 75 QALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGS 134
>sp|Q1RKF1|Y082_RICBR Uncharacterized membrane protein RBE_0082 OS=Rickettsia bellii
(strain RML369-C) GN=RBE_0082 PE=3 SV=1
Length = 302
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 55/86 (63%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ S+ F + + FG+ + + GA E++ +++E+++S+DN+FV +IF++F
Sbjct: 29 SFKQSLLFSLFYFTISCLFGIYIYYNMGADSTREYYTCFLIEKAMSLDNIFVISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLI 198
K+P YQ+RVL +GI G I FR +I
Sbjct: 89 KIPQKYQHRVLFFGIIGVIAFRAVMI 114
>sp|Q8K9X4|Y160_BUCAP Uncharacterized membrane protein BUsg_160 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_160 PE=3
SV=1
Length = 310
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 143 KASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFR 194
K F Y LE LS+DN+F + IFK K+P++YQ +VL YG+ GA++ R
Sbjct: 68 KIIYFLTSYFLEILLSIDNVFAWFFIFKSLKIPLIYQKKVLLYGLWGALILR 119
>sp|Q89AT3|Y156_BUCBP Uncharacterized membrane protein bbp_156 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_156 PE=3
SV=1
Length = 321
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 147 FFAGYILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATL 205
F +GY+LEQSLS+DN+ ++ +F+ F + +++Q +L YG A+VFR S+I G L
Sbjct: 80 FISGYLLEQSLSMDNVAMWFFLFQLFSISMVHQRVILFYGTFLALVFRSSIIFFGVWLL 138
>sp|Q68VW2|Y774_RICTY Uncharacterized membrane protein RT0774 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0774 PE=3 SV=1
Length = 302
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
++ SSV F + FG+ + G A E++ +++E+++++DN+F+ +IF++F
Sbjct: 29 AFKSSVFLSLFYFIISCLFGIYIYHNMGLDHAREYYTCFLIEKAMALDNIFIISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATL 205
K+P YQ+RVL +GI G I+F+ ++I+ G L
Sbjct: 89 KIPTTYQHRVLFFGIIGVIIFK-AIIIYGGIML 120
>sp|O05976|Y786_RICPR Uncharacterized membrane protein RP786 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP786 PE=3 SV=1
Length = 297
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 113 SYTSSVKTVAFCVSTAVAFGLGVGFIEGASKASEFFAGYILEQSLSVDNLFVFVLIFKYF 172
S+ S+ F + FG+ V G A E++ +++E+++++DN+F+ +IF++F
Sbjct: 29 SFKGSILLSLFYFIISCLFGIYVYHNMGLDHAREYYTCFLIEKAMALDNIFIISIIFQFF 88
Query: 173 KVPVMYQNRVLSYGIAGAIVFRLSLILLGTATL 205
+P YQ+RVL +GI G I+F+ ++I+ G L
Sbjct: 89 NIPSTYQHRVLFFGIIGVIIFK-AIIIYGGIML 120
>sp|O34447|YCEF_BACSU Uncharacterized membrane protein YceF OS=Bacillus subtilis (strain
168) GN=yceF PE=3 SV=1
Length = 257
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 152 ILEQSLSVDNLFVFVLIFKYFKVPVMYQNRVLSYGIAGAIVFRLSLILLGTATLQ 206
+LE LS DN V ++ K+ +P + + L+YG+ GA +FR I LG ++
Sbjct: 38 VLEGLLSADNALVLAVMVKH--LPEKQRKKALTYGLFGAYIFRFIFIGLGMLLIK 90
>sp|P53109|AIM14_YEAST Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIM14 PE=1 SV=1
Length = 570
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAFCVSTA 128
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F +A
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSMIEVKSKHSFTLSNELKSFNNESA 531
>sp|B3LHL3|AIM14_YEAS1 Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=AIM14 PE=3 SV=1
Length = 570
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAF 123
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSLIEVKSKHSFTLSSELKSF 526
>sp|A6ZU25|AIM14_YEAS7 Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
YJM789) GN=AIM14 PE=3 SV=1
Length = 570
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAF 123
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSLIEVKSKHSFTLSNELKSF 526
>sp|C8Z891|AIM14_YEAS8 Probable metalloreductase AIM14 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=AIM14 PE=3 SV=1
Length = 576
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 70 TEQEDDLSTSEVGRSSSQSHEN-DNTSHSPTTVDDAERQIEGRESYTSSVKTVAFCVSTA 128
+++DLS S ++ S++N TSHSPT + + +++ + S+T S + +F +A
Sbjct: 472 NNEDEDLSISNFNSENADSNDNTPETSHSPTKENGSLIEVKSKHSFTLSNELKSFNNESA 531
>sp|P14242|PMS1_YEAST DNA mismatch repair protein PMS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PMS1 PE=1 SV=3
Length = 873
Score = 30.8 bits (68), Expect = 6.9, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 8 YSGVQAPHKFDSLLLRFSPTSTSQVP-KLTSLLHFCNSQA-----PTFYSVSHNRRGQYS 61
++ VQ P F +L L S + P K LLH N +A T S +NR+
Sbjct: 306 FNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLH--NERAVIDIFKTTLSDYYNRQELAL 363
Query: 62 PLLACAKGTEQEDDLSTSEVGRSSSQSHENDNTSH 96
P C++ +Q +EV S +HE+DN ++
Sbjct: 364 PKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENY 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,938,035
Number of Sequences: 539616
Number of extensions: 2416288
Number of successful extensions: 8005
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7953
Number of HSP's gapped (non-prelim): 63
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)