Citrus Sinensis ID: 028576

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------
Protein Sequence
MRVAGAATLISIPLKPSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIRKS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccEEEEEcccccccccccccHHHHHHHcHHHHHHHcccHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHcccccccHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cEEEEEEEcccccccccccccccccccccccccccccccHHHHccccccccccccccEEEEEcHHHHccccHHHHHHHHHcccHHHHHHcccccHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHcHHHHccEEEEEcHcccccHHHHcccccEEEEEEEcc
Coil and Loop (DISEMBL)
MRVAGAATLisiplkpsktkptriMALNssnknknmnpptVAMASlsgkenekrklpILLFDIMDtivrdpfyhdvpaffGMSMKELIECKHPNAWIEFEMGMISEMELARKFftdgrpfdleGLKICMKKGYAYLDGVEELLHELKQSnyemhaftnYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIRKS
Flexible Loop (DISEMBL)
mrvagaatlisiplkpsktkptRIMALnssnknknmnppTVAMASlsgkenekRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLilifirks
Low Complexity Region (SEG)
MRVAGAATLISIPLKPSKTKPTRIMALnssnknknmnppTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIRKS
Disordered region (IsUnstruct)
*******************************************************LPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFI***
Disordered Region (DISOPRED)
*********************************************************ILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIRKS
Disordered Region (DISEMBL)
MRVAGAATLISIPLKPSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIRKS
Disordered Region (DISPRO)
MRVAGAATLISIPLKPSKTKPTRI*A*NS*****NM*PP****AS****ENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIRKS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRVAGAATLISIPLKPSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIRKS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
359476630	244	PREDICTED: uncharacterized protein LOC10	0.811	0.688	0.668	1e-63
224111942	252	predicted protein [Populus trichocarpa]	0.888	0.730	0.639	2e-62
255632788	214	unknown [Glycine max]	0.811	0.785	0.662	2e-62
351723195	255	uncharacterized protein LOC100527586 [Gl	0.811	0.658	0.662	4e-62
297735303	216	unnamed protein product [Vitis vinifera]	0.685	0.657	0.767	8e-62
297839955	240	hypothetical protein ARALYDRAFT_477291 [	0.777	0.670	0.674	1e-60
388506662	256	unknown [Lotus japonicus]	0.710	0.574	0.707	1e-60
363807772	257	uncharacterized protein LOC100790345 [Gl	0.816	0.657	0.652	2e-60
255558130	224	catalytic, putative [Ricinus communis] g	0.840	0.776	0.607	4e-60
388492746	257	unknown [Medicago truncatula]	0.792	0.638	0.635	5e-60

>gi|359476630|ref|XP_003631869.1| PREDICTED: uncharacterized protein LOC100261651 [Vitis vinifera]

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 119/178 (66%), Positives = 138/178 (77%), Gaps = 10/178 (5%)

Query: 10  ISIPLK-PSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIV 68
           +S PLK    T  +R MA+   N + N         + S  +N  RKLPILLFDIMDTIV
Sbjct: 13  VSFPLKLKHPTSKSRKMAIKIINSSSN---------TTSTGDNGNRKLPILLFDIMDTIV 63

Query: 69  RDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKIC 128
           RDPFYHDVP FF M M+EL+ECKHP AWIEFE G+I+E ELARKFF DGR FDLEGLK C
Sbjct: 64  RDPFYHDVPVFFRMPMEELLECKHPTAWIEFEKGLINETELARKFFKDGRDFDLEGLKNC 123

Query: 129 MKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIG 186
           M++GY+Y++GVE LL  LKQ+NYEMHAFTNYPIWYE+IEDKLK+ST+LSWTFCSC IG
Sbjct: 124 MRRGYSYIEGVEGLLRALKQNNYEMHAFTNYPIWYEMIEDKLKLSTFLSWTFCSCTIG 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111942|ref|XP_002316029.1| predicted protein [Populus trichocarpa] gi|222865069|gb|EEF02200.1| predicted protein [Populus trichocarpa]

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 119/186 (63%), Positives = 137/186 (73%), Gaps = 2/186 (1%)

Query: 1   MRVAGAATLISIPLKPSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILL 60
           M VA     + +PLK    K TR   LN   + K M P   +    + +    RKLPILL
Sbjct: 1   MAVALTVRAVHVPLKKVLPKSTRNNNLNY--RKKKMMPIVSSFPIRTEQNVNNRKLPILL 58

Query: 61  FDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPF 120
           FDIMDTIVRDPFYHDV  FFGMS +ELIE KHP AWIEFE G + EMELARKFF D R F
Sbjct: 59  FDIMDTIVRDPFYHDVAPFFGMSFEELIESKHPTAWIEFEEGRVDEMELARKFFKDKRSF 118

Query: 121 DLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTF 180
           DLEGLK CM++GY+Y+DG+EELL  LK++NYEMHAFTNYPIWY +IE+KL ISTYLSWTF
Sbjct: 119 DLEGLKNCMRRGYSYIDGIEELLCNLKENNYEMHAFTNYPIWYRLIEEKLNISTYLSWTF 178

Query: 181 CSCVIG 186
           CSC+IG
Sbjct: 179 CSCMIG 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255632788|gb|ACU16747.1| unknown [Glycine max]

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 112/169 (66%), Positives = 136/169 (80%), Gaps = 1/169 (0%)

Query: 18  KTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDVP 77
           +T+PTR + L    K+ +++    +MA  +     +RKLPILLFDIMDT+VRDPFY DVP
Sbjct: 19  QTRPTRHLCLKFRLKH-SLSHSITSMALTNNTTTNERKLPILLFDIMDTLVRDPFYQDVP 77

Query: 78  AFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLD 137
           AFFGMS+KELI+CKHP AWIEFE G+I EMELARKFF DGR FDLEGLK CM+ GY+Y++
Sbjct: 78  AFFGMSLKELIDCKHPTAWIEFEKGLIDEMELARKFFKDGRDFDLEGLKTCMRSGYSYIE 137

Query: 138 GVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIG 186
           G+E+LL  LK +NYEMHAFTNYPIWY++IEDKLK+S YLSWTFCS   G
Sbjct: 138 GIEQLLLSLKLNNYEMHAFTNYPIWYQLIEDKLKLSKYLSWTFCSWAFG 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723195|ref|NP_001238294.1| uncharacterized protein LOC100527586 [Glycine max] gi|255632691|gb|ACU16697.1| unknown [Glycine max]

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 112/169 (66%), Positives = 136/169 (80%), Gaps = 1/169 (0%)

Query: 18  KTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDVP 77
           +T+PTR + L    K+ +++    +MA  +     +RKLPILLFDIMDT+VRDPFY DVP
Sbjct: 19  QTRPTRHLCLKFRLKH-SLSYSITSMALTNNTTTNERKLPILLFDIMDTLVRDPFYQDVP 77

Query: 78  AFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLD 137
           AFFGMS+KELI+CKHP AWIEFE G+I EMELARKFF DGR FDLEGLK CM+ GY+Y++
Sbjct: 78  AFFGMSLKELIDCKHPTAWIEFEKGLIDEMELARKFFKDGRDFDLEGLKTCMRSGYSYIE 137

Query: 138 GVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIG 186
           G+E+LL  LK +NYEMHAFTNYPIWY++IEDKLK+S YLSWTFCS   G
Sbjct: 138 GIEQLLLSLKLNNYEMHAFTNYPIWYQLIEDKLKLSKYLSWTFCSWAFG 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735303|emb|CBI17665.3| unnamed protein product [Vitis vinifera]

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 109/142 (76%), Positives = 124/142 (87%)

Query: 45  SLSGKENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMI 104
           + S  +N  RKLPILLFDIMDTIVRDPFYHDVP FF M M+EL+ECKHP AWIEFE G+I
Sbjct: 12  TTSTGDNGNRKLPILLFDIMDTIVRDPFYHDVPVFFRMPMEELLECKHPTAWIEFEKGLI 71

Query: 105 SEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYE 164
           +E ELARKFF DGR FDLEGLK CM++GY+Y++GVE LL  LKQ+NYEMHAFTNYPIWYE
Sbjct: 72  NETELARKFFKDGRDFDLEGLKNCMRRGYSYIEGVEGLLRALKQNNYEMHAFTNYPIWYE 131

Query: 165 IIEDKLKISTYLSWTFCSCVIG 186
           +IEDKLK+ST+LSWTFCSC IG
Sbjct: 132 MIEDKLKLSTFLSWTFCSCTIG 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839955|ref|XP_002887859.1| hypothetical protein ARALYDRAFT_477291 [Arabidopsis lyrata subsp. lyrata] gi|297333700|gb|EFH64118.1| hypothetical protein ARALYDRAFT_477291 [Arabidopsis lyrata subsp. lyrata]

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 114/169 (67%), Positives = 132/169 (78%), Gaps = 8/169 (4%)

Query: 26  ALNSSNKNKNMNP-----PTVAMASL---SGKENEKRKLPILLFDIMDTIVRDPFYHDVP 77
           A+++S +  N+ P     P  A  S    S   + KRKLPILLFD+MDTIVRDPFYHDVP
Sbjct: 4   AMHTSTEFINLKPNIWKKPDRASGSCCLSSDDISRKRKLPILLFDVMDTIVRDPFYHDVP 63

Query: 78  AFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLD 137
           AFFGM MKEL+ECKHP AWIEFE G+I E ELARKFF DGR FDLEGLK CM+ GY+YLD
Sbjct: 64  AFFGMPMKELLECKHPMAWIEFEKGLIDEEELARKFFIDGRDFDLEGLKDCMRSGYSYLD 123

Query: 138 GVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIG 186
           G++ELLH L   ++E+HAFTNYPIWY IIEDKLK+S YLSWTFCSC+ G
Sbjct: 124 GMQELLHTLAADDFEIHAFTNYPIWYNIIEDKLKLSAYLSWTFCSCISG 172

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506662|gb|AFK41397.1| unknown [Lotus japonicus]

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 104/147 (70%), Positives = 123/147 (83%)

Query: 40  TVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEF 99
           + ++ +++      RKLPILLFDIMDT+VRDPFY DVPAFFGMS KELI+CKHP AW+EF
Sbjct: 41  SASVTNMALPNTTNRKLPILLFDIMDTLVRDPFYEDVPAFFGMSFKELIDCKHPTAWLEF 100

Query: 100 EMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNY 159
           E G I EMELAR FF DGR FDLEGLK CM+ GY+Y+DG+E+LL  LKQ+N+EMHAFTNY
Sbjct: 101 EKGSIDEMELARIFFKDGRDFDLEGLKTCMRNGYSYIDGIEQLLFTLKQNNFEMHAFTNY 160

Query: 160 PIWYEIIEDKLKISTYLSWTFCSCVIG 186
           P WY++IEDKLK+STYLSWTFCSC  G
Sbjct: 161 PTWYQLIEDKLKLSTYLSWTFCSCTHG 187

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807772|ref|NP_001242176.1| uncharacterized protein LOC100790345 [Glycine max] gi|255641172|gb|ACU20863.1| unknown [Glycine max]

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/170 (65%), Positives = 137/170 (80%), Gaps = 1/170 (0%)

Query: 18  KTKPTRIMALNSSNK-NKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFYHDV 76
           +T+PTR + L    K + + +  ++A+ + +     +RKLPILLFDIMDT+VRDPFY DV
Sbjct: 19  QTRPTRHLCLKFRLKPSLSHSITSMALTNNNNTNTNERKLPILLFDIMDTLVRDPFYQDV 78

Query: 77  PAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYL 136
           PAFFGMS+KELI+CKHP AWIEF+ G+I EMELARKFF DGR FDLEGLK CM+ GY+Y+
Sbjct: 79  PAFFGMSLKELIDCKHPTAWIEFKKGLIDEMELARKFFKDGRDFDLEGLKSCMRSGYSYI 138

Query: 137 DGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIG 186
           +G E+LL  LKQ+NYEMHAFTNYPIWY++IEDKLK+S YLSWTFCS   G
Sbjct: 139 EGSEQLLLSLKQNNYEMHAFTNYPIWYQLIEDKLKLSKYLSWTFCSWAFG 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558130|ref|XP_002520093.1| catalytic, putative [Ricinus communis] gi|223540721|gb|EEF42282.1| catalytic, putative [Ricinus communis]

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 113/186 (60%), Positives = 138/186 (74%), Gaps = 12/186 (6%)

Query: 1   MRVAGAATLISIPLKPSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILL 60
           +RV  A  L       S ++ +  MAL  ++ NK     T +  S + K+   RKLPILL
Sbjct: 5   LRVTAATPL-------SSSRLSTKMALRPTSSNK-----TTSNVSFTSKKGGGRKLPILL 52

Query: 61  FDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPF 120
           FDIMDTIVRDPFYHD+P FFGMS +ELIECK P AWIEFE G I E+EL++KFF DGRPF
Sbjct: 53  FDIMDTIVRDPFYHDIPNFFGMSFEELIECKDPTAWIEFEKGFIDEIELSKKFFKDGRPF 112

Query: 121 DLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTF 180
           DLEGLK CM +GY+Y+DGVE+LL +LKQ+NYEMHAFTNYP W+ +IE+KL +STYLSW F
Sbjct: 113 DLEGLKNCMSRGYSYMDGVEDLLCDLKQNNYEMHAFTNYPNWHTMIEEKLNVSTYLSWMF 172

Query: 181 CSCVIG 186
           CS + G
Sbjct: 173 CSSLYG 178

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492746|gb|AFK34439.1| unknown [Medicago truncatula]

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 110/173 (63%), Positives = 131/173 (75%), Gaps = 9/173 (5%)

Query: 14  LKPSKTKPTRIMALNSSNKNKNMNPPTVAMASLSGKENEKRKLPILLFDIMDTIVRDPFY 73
           L+   T PT  +  + SN   NM+         S  +N  RKLPILLFDIMDTIVRDPFY
Sbjct: 25  LRTQTTPPTNYLKPSLSNSITNMS---------SFPKNTNRKLPILLFDIMDTIVRDPFY 75

Query: 74  HDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGY 133
            D+P FFGMS  ELI+CKHP +WIEFE G+I E EL RKFF DGR FDLEGLK CM+ GY
Sbjct: 76  KDIPEFFGMSFNELIDCKHPTSWIEFEKGLIDEAELERKFFKDGRDFDLEGLKTCMRNGY 135

Query: 134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIG 186
           +Y++GVE+LL  LK++N+EMHAFTNYPIWY++IEDKLK+S YLSWTFCSC +G
Sbjct: 136 SYIEGVEQLLLALKKNNFEMHAFTNYPIWYQLIEDKLKLSKYLSWTFCSCTLG 188

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
TAIR|locus:2019873	245	FHY1 "flavin mononucleotide hy	0.695	0.587	0.724	7.5e-57

TAIR|locus:2019873 FHY1 "flavin mononucleotide hydrolase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 105/145 (72%), Positives = 120/145 (82%)

Query:    43 MASLSGKE-NEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEM 101
             + S SG E + KRKLPILLFD+MDTIVRDPFY DVPAFFGM MK+L+ECKHP  WIEFE 
Sbjct:    33 LGSSSGDEISRKRKLPILLFDVMDTIVRDPFYQDVPAFFGMPMKQLLECKHPMVWIEFEK 92

Query:   102 GMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPI 161
             G+I E ELAR FF DGR FDLEGLK CM+ GY+YLDG++ELL  L   ++E+HAFTNYPI
Sbjct:    93 GLIDEEELARNFFIDGRDFDLEGLKECMRSGYSYLDGMQELLQTLAADDFEIHAFTNYPI 152

Query:   162 WYEIIEDKLKISTYLSWTFCSCVIG 186
             WY IIEDKLK+S YLSWTFCSC+ G
Sbjct:   153 WYNIIEDKLKLSAYLSWTFCSCIAG 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      207       195   0.00078  111 3  11 22  0.40    32
                                                     31  0.44    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  180 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.59u 0.15s 16.74t   Elapsed:  00:00:01
  Total cpu time:  16.59u 0.15s 16.74t   Elapsed:  00:00:01
  Start:  Sat May 11 02:23:48 2013   End:  Sat May 11 02:23:49 2013

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_X1288 SubName- Full=Putative uncharacterized protein; (253 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	207
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	3e-04

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 59  LLFDIMDTIV-RDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEME----LARKF 113
           ++FD+  T++  DP   +  A   ++ + L      +A    E G +   E    L R+ 
Sbjct: 1   IIFDLDGTLIDFDPVIFE--ALRDLAAERL--GLDISAEELREAGGLPFDEALADLLREH 56

Query: 114 FTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWY-EIIEDKLKI 172
             D        L+  ++        V ELL  LK    ++   +N      E + +KL +
Sbjct: 57  PIDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKLGL 116

Query: 173 STYLSWTFCSCVIGM 187
                  F S  +G 
Sbjct: 117 LDLFDAVFTSDDVGA 131

Length = 176

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	207
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.88
PRK09449	224	dUMP phosphatase; Provisional	99.87
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.83
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.83
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.82
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.82
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.82
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.82
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.81
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.8
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.8
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.79
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.79
PRK11587	218	putative phosphatase; Provisional	99.79
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.79
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.79
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.78
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.77
PRK13288	214	pyrophosphatase PpaX; Provisional	99.77
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.77
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.77
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.77
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.77
PLN02575	381	haloacid dehalogenase-like hydrolase	99.75
PLN02940	382	riboflavin kinase	99.75
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.75
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.73
COG0546	220	Gph Predicted phosphatases [General function predi	99.72
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.72
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.71
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.7
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.69
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.69
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.69
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.68
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.68
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.67
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.67
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.66
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.63
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.62
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.59
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.56
PHA02597	197	30.2 hypothetical protein; Provisional	99.54
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.53
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.52
PLN02954	224	phosphoserine phosphatase	99.51
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.46
PLN02811	220	hydrolase	99.45
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.42
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.35
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.32
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.3
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.29
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.29
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.26
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.26
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.25
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.24
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.21
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.21
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.17
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.08
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.07
PRK11590	211	hypothetical protein; Provisional	99.05
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.04
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	98.99
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.98
PRK06769	173	hypothetical protein; Validated	98.93
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.92
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.92
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	98.91
PRK08238	479	hypothetical protein; Validated	98.87
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.86
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.68
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	98.66
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.62
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.52
PHA02530	300	pseT polynucleotide kinase; Provisional	98.44
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.41
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.31
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.29
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.29
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.28
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.28
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	98.21
COG4996	164	Predicted phosphatase [General function prediction	98.19
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.15
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.14
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	98.03
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.99
PHA03398	303	viral phosphatase superfamily protein; Provisional	97.94
PLN02645	311	phosphoglycolate phosphatase	97.92
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.86
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.83
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	97.82
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.8
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.73
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.7
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	97.62
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	97.58
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	97.53
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.45
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.38
PTZ00445	219	p36-lilke protein; Provisional	97.38
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.38
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.32
PRK10513	270	sugar phosphate phosphatase; Provisional	97.32
COG4359	220	Uncharacterized conserved protein [Function unknow	97.31
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.23
PRK10444	248	UMP phosphatase; Provisional	97.2
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.18
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.18
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.05
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.97
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	96.93
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	96.88
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.72
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.66
PRK10976	266	putative hydrolase; Provisional	96.66
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	96.64
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.58
PLN02887	580	hydrolase family protein	96.53
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.43
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	96.43
COG4229	229	Predicted enolase-phosphatase [Energy production a	96.33
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	96.32
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	95.96
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	95.64
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	95.53
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	95.18
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	95.17
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	95.09
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	94.86
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	94.78
PLN02499	498	glycerol-3-phosphate acyltransferase	94.78
PLN02177	497	glycerol-3-phosphate acyltransferase	94.69
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	94.37
PTZ00174	247	phosphomannomutase; Provisional	94.03
COG2503	274	Predicted secreted acid phosphatase [General funct	94.0
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	93.71
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	93.53
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	93.46
PLN02423	245	phosphomannomutase	92.99
PRK10444	248	UMP phosphatase; Provisional	92.98
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	92.53
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	92.25
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	92.07
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	91.18
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	91.17
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	89.74
KOG4549	144	consensus Magnesium-dependent phosphatase [General	89.24
PRK10671	834	copA copper exporting ATPase; Provisional	89.06
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	88.64
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	88.39
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	88.04
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	87.98
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	87.79
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	87.61
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	87.1
COG5663	194	Uncharacterized conserved protein [Function unknow	86.93
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	86.04
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	85.17
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	85.11
PLN02645	311	phosphoglycolate phosphatase	85.11
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	85.03
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	84.87
PRK06769	173	hypothetical protein; Validated	84.73
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	84.61
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	84.41
COG0731	296	Fe-S oxidoreductases [Energy production and conver	84.26
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	84.24
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	82.61
PHA03398	303	viral phosphatase superfamily protein; Provisional	82.34
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	81.76
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	81.61
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	81.41
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	81.36
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	80.47
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	80.25
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	80.02

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.88  E-value=1.6e-21  Score=159.97  Aligned_cols=146  Identities=15%  Similarity=0.157  Sum_probs=111.5

Q ss_pred             CeEEEEcCCcccCCChhchH---HHHHcCCHHHHHHhhC-chHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHHHHh
Q 028576           57 PILLFDIMDTIVRDPFYHDV---PAFFGMSMKELIECKH-PNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKICMKK  131 (207)
Q Consensus        57 ~~IlFDLDGTLvD~~~~~~l---~~~~g~~~~~~~~~~~-~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~~~~  131 (207)
                      .+||||+||||+|.+....+   ....+....++...+. ...|.+++.|.++..++++.+.+. +.+.+.+++...+..
T Consensus         1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (199)
T PRK09456          1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHGWQA   80 (199)
T ss_pred             CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            37999999999996544433   3234556666655443 357999999999999998887765 555555666555543


Q ss_pred             c-CCcchhHHHHHHHHhHCCCeEEEEcCcHHHH-HHHHHh-CCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 G-YAYLDGVEELLHELKQSNYEMHAFTNYPIWY-EIIEDK-LKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~-~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~-~~il~~-~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      . ..++||+.++|+.|+++|++++|+||++... +..+.. .++..+||.+++|++++..||+|++|+.++...
T Consensus        81 ~~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~  154 (199)
T PRK09456         81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAE  154 (199)
T ss_pred             HHhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHc
Confidence            2 3689999999999999999999999997543 333333 478899999999999999999999999998764

>PRK09449 dUMP phosphatase; Provisional

Probab=99.87  E-value=2.5e-21  Score=160.74  Aligned_cols=146  Identities=18%  Similarity=0.267  Sum_probs=105.1

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHH---cCC--HHHHH--HhhCchHHHHHHhCCCCHHHHHHH----Hhhc-CCCCC
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFF---GMS--MKELI--ECKHPNAWIEFEMGMISEMELARK----FFTD-GRPFD  121 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~---g~~--~~~~~--~~~~~~~w~~~e~G~Is~~e~~~~----~~~~-g~~~~  121 (207)
                      |++++|+||+||||+|.....++.+++   |.+  .+.+.  .......|..++.|.++..++...    +.+. +.  +
T Consensus         1 m~~k~iiFDlDGTLid~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   78 (224)
T PRK09449          1 MKYDWILFDADETLFHFDAFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNV--T   78 (224)
T ss_pred             CCccEEEEcCCCchhcchhhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC--C
Confidence            468899999999999844444454443   543  23222  124446788888888887655422    2222 32  2


Q ss_pred             HHHHHH----HHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHH
Q 028576          122 LEGLKI----CMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       122 ~~~l~~----~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                      .+++.+    .+.....++||+.++|++|+ +|++++|+||++.. ....++.+++.+|||.+++|++++..||+|++|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~  157 (224)
T PRK09449         79 PGELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFD  157 (224)
T ss_pred             HHHHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHH
Confidence            333333    33344678999999999999 57999999998754 4456799999999999999999999999999999


Q ss_pred             Hhhhhh
Q 028576          197 GNLILI  202 (207)
Q Consensus       197 ~~~~~~  202 (207)
                      .++...
T Consensus       158 ~~~~~~  163 (224)
T PRK09449        158 YALEQM  163 (224)
T ss_pred             HHHHHc
Confidence            998754

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.83  E-value=1.8e-19  Score=148.73  Aligned_cols=146  Identities=21%  Similarity=0.192  Sum_probs=103.8

Q ss_pred             CCeEEEEcCCcccCC--ChhchHHHHH---cCCH--HHH--HHhhCchHHHHHHhCCCCHHHHH----HHHhhc-CCCCC
Q 028576           56 LPILLFDIMDTIVRD--PFYHDVPAFF---GMSM--KEL--IECKHPNAWIEFEMGMISEMELA----RKFFTD-GRPFD  121 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~--~~~~~l~~~~---g~~~--~~~--~~~~~~~~w~~~e~G~Is~~e~~----~~~~~~-g~~~~  121 (207)
                      +++|+||+||||+|.  ....++.+++   |...  +..  +.......|..+..|.++..++.    +.+++. +.+.+
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD   80 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence            579999999999993  2333455543   5432  111  12233456777888888876543    233333 43333


Q ss_pred             HHHHHHHHH----hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHH
Q 028576          122 LEGLKICMK----KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       122 ~~~l~~~~~----~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                      .+.+.+.+.    ....++||+.++|++|+++ ++++|+||+... .+..++.+++..+||.+++|++++..||+|++|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~  159 (224)
T TIGR02254        81 EALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFN  159 (224)
T ss_pred             HHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHH
Confidence            333433332    3357899999999999999 999999998754 4557899999999999999999999999999999


Q ss_pred             Hhhhhh
Q 028576          197 GNLILI  202 (207)
Q Consensus       197 ~~~~~~  202 (207)
                      .++...
T Consensus       160 ~~~~~~  165 (224)
T TIGR02254       160 YALERM  165 (224)
T ss_pred             HHHHHh
Confidence            998754

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.83  E-value=9e-20  Score=148.88  Aligned_cols=147  Identities=14%  Similarity=0.123  Sum_probs=95.1

Q ss_pred             CCeEEEEcCCcccCC-ChhchHHHHHcCCHHHH----HHhhCchHHHHHHhCCC-CHH----HHHHHHhhc-CCCCCHHH
Q 028576           56 LPILLFDIMDTIVRD-PFYHDVPAFFGMSMKEL----IECKHPNAWIEFEMGMI-SEM----ELARKFFTD-GRPFDLEG  124 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~~~~~l~~~~g~~~~~~----~~~~~~~~w~~~e~G~I-s~~----e~~~~~~~~-g~~~~~~~  124 (207)
                      +++|+||+||||+|. +....+.+.++....+.    ........|.....|.. +..    +.++.+++. |.+.+.+.
T Consensus         1 ik~viFD~dgTLiD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~   80 (198)
T TIGR01428         1 IKALVFDVYGTLFDVHSVVERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDESA   80 (198)
T ss_pred             CcEEEEeCCCcCccHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHHH
Confidence            368999999999993 23333444443221111    11111112222223322 222    223334433 54444332


Q ss_pred             HHHHH--HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          125 LKICM--KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       125 l~~~~--~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .....  .....++||+.++|++|+++|++++|+||++.. ....++++|+.++||.+++|++++..||+|++|+.++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~  160 (198)
T TIGR01428        81 ADRLAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEA  160 (198)
T ss_pred             HHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHH
Confidence            22221  134578899999999999999999999999854 555778999999999999999999999999999999875


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       161 ~  161 (198)
T TIGR01428       161 L  161 (198)
T ss_pred             h
Confidence            4

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.82  E-value=1.6e-19  Score=153.12  Aligned_cols=147  Identities=15%  Similarity=0.176  Sum_probs=96.3

Q ss_pred             CCCeEEEEcCCcccCC-C--hhchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCH---
Q 028576           55 KLPILLFDIMDTIVRD-P--FYHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDL---  122 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~-~--~~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~---  122 (207)
                      |+++||||+||||+|+ .  ...++.+++   |.  +.+++....+...|..+.. ..+..+..+.+.+. +.+.+.   
T Consensus         1 ~~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   79 (253)
T TIGR01422         1 KIEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRA-LLKMPAVAERWRAKFGRLPTEADI   79 (253)
T ss_pred             CceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHH-HhcCHHHHHHHHHHhCCCCCHHHH
Confidence            4689999999999995 2  234455554   43  3344443333333332221 11111222222222 322222   


Q ss_pred             HHHHHHH--------HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccccc-CeEEEccccCCCCCCh
Q 028576          123 EGLKICM--------KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYL-SWTFCSCVIGMFSKQC  192 (207)
Q Consensus       123 ~~l~~~~--------~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yF-D~v~~S~evg~~KPdP  192 (207)
                      +++...+        .....++||+.++|++|+++|++++|+||++.. .+.+++++++.+|| |.|++|++++..||+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p  159 (253)
T TIGR01422        80 EAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAP  159 (253)
T ss_pred             HHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCH
Confidence            2221222        234578999999999999999999999999854 55577899999996 9999999999999999


Q ss_pred             HHHHHhhhhh
Q 028576          193 LKERGNLILI  202 (207)
Q Consensus       193 eiy~~~~~~~  202 (207)
                      ++|+.++...
T Consensus       160 ~~~~~a~~~l  169 (253)
T TIGR01422       160 WMALKNAIEL  169 (253)
T ss_pred             HHHHHHHHHc
Confidence            9999998754

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.82  E-value=1.1e-19  Score=152.53  Aligned_cols=144  Identities=13%  Similarity=0.043  Sum_probs=92.5

Q ss_pred             CCCCeEEEEcCCcccCCChhch-HH--------HHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHH
Q 028576           54 RKLPILLFDIMDTIVRDPFYHD-VP--------AFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLE  123 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~-l~--------~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~  123 (207)
                      +++++|||||||||+|+.+... +.        +.+|.+.++....+.. .+... .+..+. +..+.+.+. +..  ..
T Consensus         8 ~~~k~vIFDlDGTL~d~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~~~--~~   82 (224)
T PRK14988          8 QDVDTVLLDMDGTLLDLAFDNYFWQKLVPETLGAQRGISPQEAQEYIRQ-EYHAV-QHTLNW-YCLDYWSERLGLD--IC   82 (224)
T ss_pred             ccCCEEEEcCCCCccchhhhchHHHhhHHHHHHHHhCcCHHHHHHHHHH-HHHHH-cCccce-ecHHHHHHHhCCC--HH
Confidence            6678999999999999532221 22        2235554443322111 01100 011110 111112111 221  11


Q ss_pred             HHHHHHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          124 GLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       124 ~l~~~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...........++||+.++|+.|+++|++++|+||++.. ....++++++.+|||.+++|++++..||+|++|+.++...
T Consensus        83 ~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~  162 (224)
T PRK14988         83 AMTTEQGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHT  162 (224)
T ss_pred             HHHHHHhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHc
Confidence            222223344678999999999999999999999998754 4456788999999999999999999999999999987653

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.82  E-value=1.3e-19  Score=149.40  Aligned_cols=147  Identities=14%  Similarity=0.097  Sum_probs=100.8

Q ss_pred             CCeEEEEcCCcccCCCh-hchHHHHH---cCCHHHHHHhh---CchHHHH-HHhCCCCHHHHHHHHhhc-CC----CCCH
Q 028576           56 LPILLFDIMDTIVRDPF-YHDVPAFF---GMSMKELIECK---HPNAWIE-FEMGMISEMELARKFFTD-GR----PFDL  122 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~-~~~l~~~~---g~~~~~~~~~~---~~~~w~~-~e~G~Is~~e~~~~~~~~-g~----~~~~  122 (207)
                      +++|||||||||+|+.. ..++...+   |.+.++....+   ....|.+ ++.|.++.+++.+.+.+. +.    +...
T Consensus         2 ik~viFDldGtL~d~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   81 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSPGVMRRWETERGLPGLKDFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGHDVRI   81 (211)
T ss_pred             ceEEEEecCCceecCHHHHHHHHHHcCCCCCccHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCCCcCc
Confidence            46899999999999532 33355443   33333322221   2234655 788988887777655432 21    1222


Q ss_pred             HHHHHHHH-hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH---HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHh
Q 028576          123 EGLKICMK-KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW---YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGN  198 (207)
Q Consensus       123 ~~l~~~~~-~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~---~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~  198 (207)
                      ++....+. ....++||+.++|+.|+++|++++|+||++..   ....+...++.++||.+++|++++..||+|++|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~  161 (211)
T TIGR02247        82 APVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLM  161 (211)
T ss_pred             hhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHH
Confidence            33333332 34678999999999999999999999998632   222234568889999999999999999999999999


Q ss_pred             hhhh
Q 028576          199 LILI  202 (207)
Q Consensus       199 ~~~~  202 (207)
                      +...
T Consensus       162 ~~~~  165 (211)
T TIGR02247       162 LERL  165 (211)
T ss_pred             HHHc
Confidence            8654

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.82  E-value=1.2e-19  Score=154.19  Aligned_cols=72  Identities=15%  Similarity=0.090  Sum_probs=65.0

Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ....++||+.++|++|+++|++++|+||++.. ....++++++.+|||.++++++++..||+|++|+.++...
T Consensus       105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~  177 (248)
T PLN02770        105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVL  177 (248)
T ss_pred             hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHh
Confidence            34678999999999999999999999999754 5557899999999999999999999999999999998764

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.81  E-value=4e-19  Score=145.42  Aligned_cols=145  Identities=16%  Similarity=0.203  Sum_probs=95.3

Q ss_pred             CeEEEEcCCcccCC--ChhchHHHHH---cCC--HHHHHHhh---Cc---hHHHHHH--hCCCCHHHHHHHHhh----c-
Q 028576           57 PILLFDIMDTIVRD--PFYHDVPAFF---GMS--MKELIECK---HP---NAWIEFE--MGMISEMELARKFFT----D-  116 (207)
Q Consensus        57 ~~IlFDLDGTLvD~--~~~~~l~~~~---g~~--~~~~~~~~---~~---~~w~~~e--~G~Is~~e~~~~~~~----~-  116 (207)
                      ++|+||+||||+|+  .+..++.+++   |.+  .+++...+   ..   ..|..+.  .| ++..+++..++.    . 
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~   79 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSG-LTPQQWWQKLVRDTFGRA   79 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCC-CCHHHHHHHHHHHHHHhc
Confidence            47999999999993  3455555554   443  22221110   00   1121111  13 555555444332    2 


Q ss_pred             CCCC--CHHHHHHHHHh------cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCC
Q 028576          117 GRPF--DLEGLKICMKK------GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMF  188 (207)
Q Consensus       117 g~~~--~~~~l~~~~~~------~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~  188 (207)
                      +...  ...++...+..      ...++||+.++|++|+++|++++|+||+....+..++.+++..+||.+++|++++..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~~~l~~~~l~~~fd~i~~s~~~~~~  159 (203)
T TIGR02252        80 GVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSRLRGLLEALGLLEYFDFVVTSYEVGAE  159 (203)
T ss_pred             CCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHCCcHHhcceEEeecccCCC
Confidence            3211  12222222221      236789999999999999999999999876666677899999999999999999999


Q ss_pred             CCChHHHHHhhhhh
Q 028576          189 SKQCLKERGNLILI  202 (207)
Q Consensus       189 KPdPeiy~~~~~~~  202 (207)
                      ||+|++|+.++...
T Consensus       160 KP~~~~~~~~~~~~  173 (203)
T TIGR02252       160 KPDPKIFQEALERA  173 (203)
T ss_pred             CCCHHHHHHHHHHc
Confidence            99999999998654

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.80  E-value=3.5e-19  Score=149.29  Aligned_cols=140  Identities=19%  Similarity=0.170  Sum_probs=93.7

Q ss_pred             CCCeEEEEcCCcccCC-Chhc-hHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHH
Q 028576           55 KLPILLFDIMDTIVRD-PFYH-DVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKI  127 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~-~~~~-~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~  127 (207)
                      ++++|||||||||||+ +.+. +|.+++   |..  .+..........|.        ...............+....+.
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~   72 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIAR--------IIDLLRKLAAGEDPADLAELER   72 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHH--------HHHHHHHHhcCCcccCHHHHHH
Confidence            3689999999999994 4433 466665   432  22222222211111        0122222211111012222211


Q ss_pred             -------HHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhh
Q 028576          128 -------CMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       128 -------~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                             .......++||+.++|+.|+++|.+++++||++. ..++.++.+|+.+||+.+++++++...||+|++|+.|.
T Consensus        73 ~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa  152 (221)
T COG0637          73 LLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAA  152 (221)
T ss_pred             HHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHH
Confidence                   1223457899999999999999999999999974 56778899999999999999999999999999999998


Q ss_pred             hhh
Q 028576          200 ILI  202 (207)
Q Consensus       200 ~~~  202 (207)
                      ..+
T Consensus       153 ~~L  155 (221)
T COG0637         153 ERL  155 (221)
T ss_pred             HHc
Confidence            764

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.80  E-value=6.3e-19  Score=151.34  Aligned_cols=139  Identities=14%  Similarity=0.112  Sum_probs=93.2

Q ss_pred             CCCeEEEEcCCcccCC-C-hh-chHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCC-CHHHH
Q 028576           55 KLPILLFDIMDTIVRD-P-FY-HDVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPF-DLEGL  125 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~-~-~~-~~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~-~~~~l  125 (207)
                      .+++|||||||||+|+ + .+ .++..++   |..  .++....         ..| .+..+.++.++...... ..+++
T Consensus        23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~---------~~G-~~~~~~~~~l~~~~~~~~~~~~l   92 (260)
T PLN03243         23 GWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKR---------AEG-MKNEQAISEVLCWSRDFLQMKRL   92 (260)
T ss_pred             CceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHH---------hcC-CCHHHHHHHHhccCCCHHHHHHH
Confidence            4579999999999996 3 33 3566654   332  2222211         123 22233333333211110 01111


Q ss_pred             HH----H---HH-hcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHH
Q 028576          126 KI----C---MK-KGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       126 ~~----~---~~-~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                      ..    .   +. ....++||+.++|+.|+++|++++|+||++. ....+++++++.+|||.++++++++..||+|++|+
T Consensus        93 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~  172 (260)
T PLN03243         93 AIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFM  172 (260)
T ss_pred             HHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHH
Confidence            11    1   11 2356899999999999999999999999974 45567899999999999999999999999999999


Q ss_pred             Hhhhhhh
Q 028576          197 GNLILIF  203 (207)
Q Consensus       197 ~~~~~~~  203 (207)
                      .|+...-
T Consensus       173 ~a~~~l~  179 (260)
T PLN03243        173 YAAERLG  179 (260)
T ss_pred             HHHHHhC
Confidence            9987643

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.79  E-value=1e-18  Score=140.34  Aligned_cols=136  Identities=17%  Similarity=0.161  Sum_probs=93.1

Q ss_pred             CCeEEEEcCCcccCC-Chh-chHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHH---H
Q 028576           56 LPILLFDIMDTIVRD-PFY-HDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGL---K  126 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~~~-~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l---~  126 (207)
                      +++|+||+||||+|+ +.+ .++..++   |.+.        ...|.....| .+..+.++.+.+. +...+.+++   .
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEF--------DKQYNTSLGG-LSREDILRAILKLRKPGLSLETIHQLA   71 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCC--------CHHHHHHcCC-CCHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            578999999999994 222 2344333   2221        1223333345 4445555555543 222222221   1


Q ss_pred             ----HHHH-----hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHH
Q 028576          127 ----ICMK-----KGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERG  197 (207)
Q Consensus       127 ----~~~~-----~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~  197 (207)
                          ..+.     ....++||+.++|+.|+++|++++++||+ ...+.+++.+++.+|||.++++++++..||+|++|+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~-~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~  150 (185)
T TIGR02009        72 ERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS-KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLL  150 (185)
T ss_pred             HHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc-hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHH
Confidence                1111     23578999999999999999999999998 5566678899999999999999999999999999998


Q ss_pred             hhhh
Q 028576          198 NLIL  201 (207)
Q Consensus       198 ~~~~  201 (207)
                      ++.-
T Consensus       151 ~~~~  154 (185)
T TIGR02009       151 AAEL  154 (185)
T ss_pred             HHHH
Confidence            8754

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.79  E-value=1.3e-18  Score=144.02  Aligned_cols=143  Identities=16%  Similarity=0.127  Sum_probs=94.4

Q ss_pred             CCeEEEEcCCcccCC-C-hhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCC-CHHHH----HH
Q 028576           56 LPILLFDIMDTIVRD-P-FYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPF-DLEGL----KI  127 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~-~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~-~~~~l----~~  127 (207)
                      +++||||+||||+|+ + +..++..++    +++........+.+.-.| .+..+.++.+++. +.+. ..+++    .+
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAV----TAAGLSPTPEEVQSAWMG-QSKIEAIRALLALDGADEAEAQAAFADFEE   75 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHH----HHcCCCCCHHHHHHhhcC-CCHHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence            478999999999993 2 333344443    111101011111121124 2445666666544 3221 11212    11


Q ss_pred             HHH-----hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcc--cccCeEEEccccCCCCCChHHHHHhh
Q 028576          128 CMK-----KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIS--TYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       128 ~~~-----~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~--~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                      .+.     ....++||+.++|+.|+++|++++|+||+... ...+++++++.  +||+.++++++++..||+|++|+.++
T Consensus        76 ~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~  155 (220)
T TIGR03351        76 RLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAM  155 (220)
T ss_pred             HHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHH
Confidence            111     12468999999999999999999999999754 55577899998  99999999999999999999999998


Q ss_pred             hhhh
Q 028576          200 ILIF  203 (207)
Q Consensus       200 ~~~~  203 (207)
                      ...=
T Consensus       156 ~~~~  159 (220)
T TIGR03351       156 ELTG  159 (220)
T ss_pred             HHcC
Confidence            7643

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK11587 putative phosphatase; Provisional

Probab=99.79  E-value=1.9e-18  Score=143.65  Aligned_cols=137  Identities=13%  Similarity=0.085  Sum_probs=88.7

Q ss_pred             CCCCeEEEEcCCcccCC--ChhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCC-H-HHH-
Q 028576           54 RKLPILLFDIMDTIVRD--PFYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFD-L-EGL-  125 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~--~~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~-~-~~l-  125 (207)
                      |++++||||+||||+|+  .+..++.+++   |.+..+....+         .|. +..+.++.+... ...+ . +.+ 
T Consensus         1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~---------~g~-~~~~~~~~~~~~-~~~~~~~~~~~   69 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFI---------HGK-QAITSLRHFMAG-ASEAEIQAEFT   69 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHH---------cCC-CHHHHHHHHhcc-CCcHHHHHHHH
Confidence            57899999999999994  2334455544   44433322211         121 122233333221 0000 0 111 


Q ss_pred             -----HHHHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhh
Q 028576          126 -----KICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       126 -----~~~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                           .........++||+.++|+.|+++|++++|+||++.. ....++..++ .+|+.++++++++..||+|++|+.++
T Consensus        70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~  148 (218)
T PRK11587         70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGA  148 (218)
T ss_pred             HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHH
Confidence                 1111234578999999999999999999999998743 3445677887 57899999999999999999999988


Q ss_pred             hhh
Q 028576          200 ILI  202 (207)
Q Consensus       200 ~~~  202 (207)
                      ...
T Consensus       149 ~~~  151 (218)
T PRK11587        149 QLL  151 (218)
T ss_pred             HHc
Confidence            654

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.79  E-value=2.2e-18  Score=147.56  Aligned_cols=150  Identities=15%  Similarity=0.130  Sum_probs=94.8

Q ss_pred             CCCCeEEEEcCCcccCCC-h--hchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHH-
Q 028576           54 RKLPILLFDIMDTIVRDP-F--YHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLE-  123 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~-~--~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~-  123 (207)
                      +++++||||+||||+|+. .  ..++.+++   |.  +.+++...++...|..+..- .+.......+.+. +.+.+.+ 
T Consensus         2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~   80 (267)
T PRK13478          2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRAL-LKMPRVAARWQAVFGRLPTEAD   80 (267)
T ss_pred             CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHH-HhcHHHHHHHHHHhCCCCCHHH
Confidence            568899999999999952 2  34565554   33  23333333332223222110 0001111111111 3222222 


Q ss_pred             --HHHHH--------HHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccccc-CeEEEccccCCCCCC
Q 028576          124 --GLKIC--------MKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYL-SWTFCSCVIGMFSKQ  191 (207)
Q Consensus       124 --~l~~~--------~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yF-D~v~~S~evg~~KPd  191 (207)
                        ++...        +.....++||+.++|+.|+++|++++|+||++.. ...+++.+++.++| |.++++++++..||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~  160 (267)
T PRK13478         81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY  160 (267)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCC
Confidence              12111        1233578999999999999999999999999855 44577888888885 999999999999999


Q ss_pred             hHHHHHhhhhhhc
Q 028576          192 CLKERGNLILIFI  204 (207)
Q Consensus       192 Peiy~~~~~~~~~  204 (207)
                      |++|+.++...-+
T Consensus       161 p~~~~~a~~~l~~  173 (267)
T PRK13478        161 PWMALKNAIELGV  173 (267)
T ss_pred             hHHHHHHHHHcCC
Confidence            9999999876543

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.79  E-value=2.2e-18  Score=142.52  Aligned_cols=71  Identities=17%  Similarity=0.078  Sum_probs=63.8

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|++|+++|++++|+||++. .....++++++.+|||.++++++++..||+|++|+.++...
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~  163 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRL  163 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHc
Confidence            457899999999999999999999999974 44556789999999999999999999999999999998653

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.78  E-value=1.8e-18  Score=138.90  Aligned_cols=135  Identities=17%  Similarity=0.183  Sum_probs=90.9

Q ss_pred             eEEEEcCCcccCCC--hhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHH---HHH-
Q 028576           58 ILLFDIMDTIVRDP--FYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEG---LKI-  127 (207)
Q Consensus        58 ~IlFDLDGTLvD~~--~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~---l~~-  127 (207)
                      +|+||+||||+|+.  +.+++.+++   |.+..        ........| .+..+.++.+++. +.+.+.+.   +.+ 
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFD--------EEFNESLKG-VSREDSLERILDLGGKKYSEEEKEELAER   71 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHcCCCCC--------HHHHHHhcC-CChHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence            58999999999942  223344433   32211        111112234 4445666666554 44333222   111 


Q ss_pred             ---HHH------hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHh
Q 028576          128 ---CMK------KGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGN  198 (207)
Q Consensus       128 ---~~~------~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~  198 (207)
                         .+.      ....++||+.++|++|+++|++++|+||+.. ....++.+++.++||.+++|++++..||+|++|+.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~-~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~  150 (185)
T TIGR01990        72 KNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN-APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAA  150 (185)
T ss_pred             HHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc-HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHH
Confidence               111      1236889999999999999999999999753 234678899999999999999999999999999999


Q ss_pred             hhhh
Q 028576          199 LILI  202 (207)
Q Consensus       199 ~~~~  202 (207)
                      +...
T Consensus       151 ~~~~  154 (185)
T TIGR01990       151 AEGL  154 (185)
T ss_pred             HHHc
Confidence            8754

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.77  E-value=3.2e-18  Score=141.64  Aligned_cols=150  Identities=19%  Similarity=0.104  Sum_probs=97.1

Q ss_pred             CCCCeEEEEcCCcccCCChh--chH-HHHH--cCC--HHHHHHhhCch-HHHHHHhCCCCHHHHHH--HHhh----cCCC
Q 028576           54 RKLPILLFDIMDTIVRDPFY--HDV-PAFF--GMS--MKELIECKHPN-AWIEFEMGMISEMELAR--KFFT----DGRP  119 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~--~~l-~~~~--g~~--~~~~~~~~~~~-~w~~~e~G~Is~~e~~~--~~~~----~g~~  119 (207)
                      +.+++|+||+||||+|....  ... ..+.  +..  ........... .|..+.++....+....  .+..    ....
T Consensus         2 ~~~k~i~FD~d~TL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (229)
T COG1011           2 MMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGLTLERLLELLERLLGD   81 (229)
T ss_pred             CceeEEEEecCCcccccchHHhHHHHHHHHHhchHHHhhhhHHHHHHHHHHHHHHcccchHHHhhhHHHHHHHHHhhccc
Confidence            56789999999999993221  111 1111  111  11111111112 57777777655533222  1111    1222


Q ss_pred             CCHHHHHH---HHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEccccCCCCCChHHH
Q 028576          120 FDLEGLKI---CMKKGYAYLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKE  195 (207)
Q Consensus       120 ~~~~~l~~---~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy  195 (207)
                      ...+....   .+.....++|++.+.|+.|+++ |+++|+||+. ......++++|+.++||.+++|+++|..||+|++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f  160 (229)
T COG1011          82 EDAELVEELLAALAKLLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIF  160 (229)
T ss_pred             ccHHHHHHHHHHHHhhCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHH
Confidence            22222222   2223468899999999999999 9999999976 44556779999999999999999999999999999


Q ss_pred             HHhhhhhhc
Q 028576          196 RGNLILIFI  204 (207)
Q Consensus       196 ~~~~~~~~~  204 (207)
                      +.++...=+
T Consensus       161 ~~~~~~~g~  169 (229)
T COG1011         161 EYALEKLGV  169 (229)
T ss_pred             HHHHHHcCC
Confidence            999986543

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.77  E-value=5.7e-18  Score=139.95  Aligned_cols=70  Identities=14%  Similarity=0.027  Sum_probs=63.4

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|++|+++|++++|+||++.. +...++.+++.+||+.++++++++..||+|++|+.++...
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~  151 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELL  151 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHc
Confidence            468999999999999999999999999754 5567899999999999999999999999999999988653

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.77  E-value=6.5e-18  Score=140.48  Aligned_cols=71  Identities=13%  Similarity=0.067  Sum_probs=64.0

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+++|++++|+||+... .+.+++.+++.+||+.+++|++++..||+|++|+.++...
T Consensus        90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  161 (222)
T PRK10826         90 TRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKL  161 (222)
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHc
Confidence            4578999999999999999999999998754 5557788999999999999999999999999999998754

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.77  E-value=5.2e-18  Score=136.94  Aligned_cols=137  Identities=15%  Similarity=0.081  Sum_probs=89.0

Q ss_pred             CCCeEEEEcCCcccCC-C-hhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH-
Q 028576           55 KLPILLFDIMDTIVRD-P-FYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKI-  127 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~-~-~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~-  127 (207)
                      ++++|+||+||||+|+ + +..++.+++   |...       ..... ....| .+..+.++.++.. +.+.+.+++.. 
T Consensus         4 ~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~-------~~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (188)
T PRK10725          4 RYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQF-------DEQAM-VALNG-SPTWRIAQAIIELNQADLDPHALARE   74 (188)
T ss_pred             cceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCC-------CHHHH-HHhcC-CCHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            4689999999999994 1 233344443   2211       00001 11123 2223444444432 32333333322 


Q ss_pred             -------HHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhh
Q 028576          128 -------CMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       128 -------~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                             .......++|| .++|+.|+++ ++++|+||++.. .+..++.+++.+|||.+++|++++..||+|++|+.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~  152 (188)
T PRK10725         75 KTEAVKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCA  152 (188)
T ss_pred             HHHHHHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHH
Confidence                   11234467786 5899999875 999999999754 5567899999999999999999999999999999997


Q ss_pred             hhh
Q 028576          200 ILI  202 (207)
Q Consensus       200 ~~~  202 (207)
                      ...
T Consensus       153 ~~~  155 (188)
T PRK10725        153 QLM  155 (188)
T ss_pred             HHc
Confidence            654

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.77  E-value=5.2e-18  Score=140.70  Aligned_cols=136  Identities=16%  Similarity=0.202  Sum_probs=93.3

Q ss_pred             CCCCeEEEEcCCcccCC-Ch-hchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHH
Q 028576           54 RKLPILLFDIMDTIVRD-PF-YHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGL  125 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~-~~-~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l  125 (207)
                      +++++|+||+||||+|+ +. .+++.+++   |.  +.+++.         ..-.| .+..+.++.+... +.+.+.+++
T Consensus         2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~---------~~~~g-~~~~~~~~~~~~~~~~~~~~~~~   71 (221)
T PRK10563          2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVF---------KRFKG-VKLYEIIDIISKEHGVTLAKAEL   71 (221)
T ss_pred             CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHH---------HHhcC-CCHHHHHHHHHHHhCCCCCHHHH
Confidence            46889999999999994 22 23444443   32  112211         11123 4455666666654 444444444


Q ss_pred             HHHH--------HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccC-eEEEccccCCCCCChHHH
Q 028576          126 KICM--------KKGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLS-WTFCSCVIGMFSKQCLKE  195 (207)
Q Consensus       126 ~~~~--------~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD-~v~~S~evg~~KPdPeiy  195 (207)
                      ...+        .....++||+.++|+.|   +++++|+||++. ..+..++.+++.+||+ .++++++++..||+|++|
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~  148 (221)
T PRK10563         72 EPVYRAEVARLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALM  148 (221)
T ss_pred             HHHHHHHHHHHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHH
Confidence            3222        23457899999999998   489999999974 4666789999999996 677888999999999999


Q ss_pred             HHhhhhh
Q 028576          196 RGNLILI  202 (207)
Q Consensus       196 ~~~~~~~  202 (207)
                      +.++...
T Consensus       149 ~~a~~~~  155 (221)
T PRK10563        149 FHAAEAM  155 (221)
T ss_pred             HHHHHHc
Confidence            9998654

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.77  E-value=4.6e-18  Score=139.61  Aligned_cols=70  Identities=16%  Similarity=0.088  Sum_probs=63.5

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++. ....+++++++.+|||.++++++++..||+|++|+.++...
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~  154 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERL  154 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHc
Confidence            56899999999999999999999999875 45567899999999999999999999999999999998754

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.75  E-value=7.5e-18  Score=151.44  Aligned_cols=140  Identities=14%  Similarity=0.062  Sum_probs=94.2

Q ss_pred             CCCeEEEEcCCcccCC-C-hhc-hHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCC-CCHHHH
Q 028576           55 KLPILLFDIMDTIVRD-P-FYH-DVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTDGRP-FDLEGL  125 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~-~-~~~-~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~-~~~~~l  125 (207)
                      ..++|||||||||+|+ + .+. ++.+++   |..  .++...         .-.| .+..+.++.++....+ ...+++
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~---------~~~G-~~~~~~l~~ll~~~~~~~~~e~l  199 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILR---------RVEG-MKNEQAISEVLCWSRDPAELRRM  199 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHH---------HhcC-CCHHHHHHHHhhccCCHHHHHHH
Confidence            6689999999999994 3 333 455543   321  121111         1123 2333444444321111 111112


Q ss_pred             ----HHHH----HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHH
Q 028576          126 ----KICM----KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       126 ----~~~~----~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                          .+.+    .....++||+.++|+.|+++|++++|+||++.. .+.+++++++.+|||.++++++++..||+|++|+
T Consensus       200 ~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl  279 (381)
T PLN02575        200 ATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFI  279 (381)
T ss_pred             HHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHH
Confidence                1111    123468999999999999999999999999854 5567899999999999999999999999999999


Q ss_pred             Hhhhhhhc
Q 028576          197 GNLILIFI  204 (207)
Q Consensus       197 ~~~~~~~~  204 (207)
                      .++..+-+
T Consensus       280 ~A~~~lgl  287 (381)
T PLN02575        280 YAAQLLNF  287 (381)
T ss_pred             HHHHHcCC
Confidence            99887543

>PLN02940 riboflavin kinase

Probab=99.75  E-value=1.1e-17  Score=150.79  Aligned_cols=146  Identities=14%  Similarity=0.055  Sum_probs=95.1

Q ss_pred             ccCCCCCeEEEEcCCcccCC--ChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH
Q 028576           51 NEKRKLPILLFDIMDTIVRD--PFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKI  127 (207)
Q Consensus        51 ~~~~~~~~IlFDLDGTLvD~--~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~  127 (207)
                      ..+-++++||||+||||+|+  .+.+++..++    +++..........+ -.|. +..+.++.+++. +.+.+.+++..
T Consensus         6 ~~~~~ik~VIFDlDGTLvDt~~~~~~a~~~~~----~~~G~~~~~~~~~~-~~G~-~~~~~~~~~~~~~~~~~~~~~~~~   79 (382)
T PLN02940          6 PLKKLVSHVILDLDGTLLNTDGIVSDVLKAFL----VKYGKQWDGREAQK-IVGK-TPLEAAATVVEDYGLPCSTDEFNS   79 (382)
T ss_pred             cccccCCEEEECCcCcCCcCHHHHHHHHHHHH----HHcCCCCCHHHHHH-hcCC-CHHHHHHHHHHHhCCCCCHHHHHH
Confidence            34456899999999999994  2233344333    11110000111111 1232 333445555443 43433333321


Q ss_pred             H----H---HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHH-hCCcccccCeEEEccccCCCCCChHHHHHh
Q 028576          128 C----M---KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIED-KLKISTYLSWTFCSCVIGMFSKQCLKERGN  198 (207)
Q Consensus       128 ~----~---~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~-~~~l~~yFD~v~~S~evg~~KPdPeiy~~~  198 (207)
                      .    +   .....++||+.++|+.|+++|++++|+||++.. +...++ ..++.+|||.++++++++..||+|++|+.+
T Consensus        80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a  159 (382)
T PLN02940         80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEA  159 (382)
T ss_pred             HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHH
Confidence            1    1   123568999999999999999999999999754 444555 789999999999999999999999999999


Q ss_pred             hhhh
Q 028576          199 LILI  202 (207)
Q Consensus       199 ~~~~  202 (207)
                      +...
T Consensus       160 ~~~l  163 (382)
T PLN02940        160 AKRL  163 (382)
T ss_pred             HHHc
Confidence            8754

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.75  E-value=1.3e-17  Score=139.85  Aligned_cols=71  Identities=18%  Similarity=0.094  Sum_probs=63.2

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|++|+++|++++|+||++.. ...+++++++.++|+.++++++++..||+|++|+.++...
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l  164 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERI  164 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHh
Confidence            3578999999999999999999999999755 4447789999999999999999999999999999998754

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.73  E-value=1.6e-17  Score=140.40  Aligned_cols=149  Identities=17%  Similarity=0.246  Sum_probs=105.5

Q ss_pred             CCCCeEEEEcCCcccC--CChhc---hHHHHHcCC--HHHHHHhhCc--------hHHHHHHhCCCCHHHHHHHHhhc-C
Q 028576           54 RKLPILLFDIMDTIVR--DPFYH---DVPAFFGMS--MKELIECKHP--------NAWIEFEMGMISEMELARKFFTD-G  117 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD--~~~~~---~l~~~~g~~--~~~~~~~~~~--------~~w~~~e~G~Is~~e~~~~~~~~-g  117 (207)
                      +++++|+||++|||+.  .+.-+   .+.+.+|+.  .++.......        ........|.++..+++..++.. .
T Consensus         5 ~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~f   84 (237)
T KOG3085|consen    5 MRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVESTF   84 (237)
T ss_pred             cceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHHh
Confidence            6788999999999997  22222   255556764  2222111110        11223456778888998876654 1


Q ss_pred             CCC---CHHHHHH----H-HHh----cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEcccc
Q 028576          118 RPF---DLEGLKI----C-MKK----GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVI  185 (207)
Q Consensus       118 ~~~---~~~~l~~----~-~~~----~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~ev  185 (207)
                      ...   ..++...    . +..    .+.+.+++.++|+.||++|+.|+++||...+.+.++..+++..|||+++.||++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~~~l~~~~l~~~fD~vv~S~e~  164 (237)
T KOG3085|consen   85 GKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLRLLLLPLGLSAYFDFVVESCEV  164 (237)
T ss_pred             ccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHHHHhhccCHHHhhhhhhhhhhh
Confidence            111   1222221    1 111    345678999999999999999999999988888888999999999999999999


Q ss_pred             CCCCCChHHHHHhhhhh
Q 028576          186 GMFSKQCLKERGNLILI  202 (207)
Q Consensus       186 g~~KPdPeiy~~~~~~~  202 (207)
                      |..||||+||+-||+.+
T Consensus       165 g~~KPDp~If~~al~~l  181 (237)
T KOG3085|consen  165 GLEKPDPRIFQLALERL  181 (237)
T ss_pred             ccCCCChHHHHHHHHHh
Confidence            99999999999999875

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.72  E-value=9.6e-17  Score=134.08  Aligned_cols=70  Identities=21%  Similarity=0.187  Sum_probs=62.9

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|.+|+++||+++|+||+++. .+.+++++|+.+||+.++++++....||+|+.+..++.-.
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~  158 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKL  158 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHh
Confidence            468999999999999999999999999855 5567899999999999999899999999999998877543

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.72  E-value=1.1e-16  Score=132.32  Aligned_cols=70  Identities=20%  Similarity=0.130  Sum_probs=63.2

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||+... ...+++.+++.++|+.++++++++..||+|++|+.++...
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  162 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKL  162 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence            568999999999999999999999999754 5567788999999999999999999999999999988754

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.71  E-value=1.1e-16  Score=131.05  Aligned_cols=66  Identities=12%  Similarity=-0.086  Sum_probs=58.3

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .+++.++|+.|+++|++++|+||++.. ...+++.+|+.+|||.++++++++. ||+|++|..++.-.
T Consensus       108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~  174 (197)
T TIGR01548       108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKAL  174 (197)
T ss_pred             ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHh
Confidence            445699999999999999999999854 5567899999999999999999987 99999999988754

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.70  E-value=1.3e-16  Score=124.90  Aligned_cols=135  Identities=19%  Similarity=0.165  Sum_probs=91.4

Q ss_pred             EEEEcCCcccCCCh--hchHHHHHcCCHHHHHHhhCc-hHHHHH-HhCCCCHHHHHHHHhhc-CCCCCHHHHHH----H-
Q 028576           59 LLFDIMDTIVRDPF--YHDVPAFFGMSMKELIECKHP-NAWIEF-EMGMISEMELARKFFTD-GRPFDLEGLKI----C-  128 (207)
Q Consensus        59 IlFDLDGTLvD~~~--~~~l~~~~g~~~~~~~~~~~~-~~w~~~-e~G~Is~~e~~~~~~~~-g~~~~~~~l~~----~-  128 (207)
                      |+||+||||+|...  .+.+...+       .+..+. ..+.++ +.+..+..+.++.+++. +..  ..++.+    . 
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   71 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLA-------LEEFGLEISAEELRELFGKSYEEALERLLERFGID--PEEIQELFREYN   71 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHH-------HHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHH-------HHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhhhh
Confidence            79999999999322  22233221       111111 011111 12334455666666543 211  222222    1 


Q ss_pred             HHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          129 MKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       129 ~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ......++||+.++|+.|+++|++++++||++.. ....++.+++.++||.+++|++.+..||+|++|+.++.-+
T Consensus        72 ~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~  146 (176)
T PF13419_consen   72 LESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKL  146 (176)
T ss_dssp             HHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHH
T ss_pred             hhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHc
Confidence            2345678999999999999999999999999754 5567899999999999999999999999999999998755

...

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.69  E-value=9.9e-17  Score=128.06  Aligned_cols=70  Identities=20%  Similarity=0.136  Sum_probs=61.7

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++........++++.++||.+++|++++..||+|++|+.++...
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~  153 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDHAVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKL  153 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHc
Confidence            5788999999999999999999999997544445556999999999999999999999999999987653

HAD subfamilies caused by an overly broad single model.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.69  E-value=2e-16  Score=133.55  Aligned_cols=66  Identities=11%  Similarity=0.060  Sum_probs=58.4

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|++|+++ ++++|+||++..    ++.+|+.+|||.+++|++++..||+|++|+.++...
T Consensus       111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~  176 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKL  176 (238)
T ss_pred             cCCCCccHHHHHHHHHcC-CCEEEEECCCch----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHc
Confidence            357889999999999975 999999998754    267899999999999999999999999999988654

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.69  E-value=1.4e-16  Score=130.79  Aligned_cols=72  Identities=18%  Similarity=0.034  Sum_probs=64.2

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ...++||+.++|++|+++|++++|+||+... ....++.+++.++||.++++++++..||+|++|+.++...-
T Consensus        73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~  145 (205)
T TIGR01454        73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLD  145 (205)
T ss_pred             ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcC
Confidence            4578999999999999999999999998744 55577999999999999999999999999999999987543

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.68  E-value=1.8e-16  Score=126.63  Aligned_cols=64  Identities=8%  Similarity=0.154  Sum_probs=55.7

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+       +++|+||++.. ....++++++.+|||.++++++++..||+|++|+.++...
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~  152 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTV  152 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHH
Confidence            4568999999998       48999999855 4457799999999999999999999999999999998754

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.68  E-value=5.9e-16  Score=133.49  Aligned_cols=70  Identities=21%  Similarity=0.221  Sum_probs=62.7

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++.. .+.+++++++..||+.++++++++..||+|++|+.++...
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~  170 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMA  170 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHh
Confidence            357899999999999999999999998754 5567788999999999999999999999999999988653

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.67  E-value=9.2e-16  Score=123.94  Aligned_cols=67  Identities=16%  Similarity=-0.008  Sum_probs=58.8

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCC----CCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGM----FSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~----~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|++|+   ++++|+||++. .....++.+|+.+|||.++++++++.    .||+|++|+.++..+
T Consensus        83 ~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~  154 (184)
T TIGR01993        83 LKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREA  154 (184)
T ss_pred             CCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHh
Confidence            468899999999997   58999999975 45567899999999999999999998    599999999998764

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.67  E-value=5.6e-16  Score=142.52  Aligned_cols=144  Identities=17%  Similarity=0.164  Sum_probs=91.7

Q ss_pred             cccCCCCCeEEEEcCCcccCC-C-hhchHHHHHcCCHHHHHH-----hhCc-hHHHHHHhCCCCHHHHHHHHhhc-CCCC
Q 028576           50 ENEKRKLPILLFDIMDTIVRD-P-FYHDVPAFFGMSMKELIE-----CKHP-NAWIEFEMGMISEMELARKFFTD-GRPF  120 (207)
Q Consensus        50 ~~~~~~~~~IlFDLDGTLvD~-~-~~~~l~~~~g~~~~~~~~-----~~~~-~~w~~~e~G~Is~~e~~~~~~~~-g~~~  120 (207)
                      ++.++.+++|||||||||+|+ + +..++.+++    +++..     .... ....+ ..| .+..+.++.++.. +.+.
T Consensus       235 ~~~~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~-~~G-~~~~~~~~~l~~~~~~~~  308 (459)
T PRK06698        235 KGENEMLQALIFDMDGTLFQTDKILELSLDDTF----DHLRSLQLWDTVTPIDKYRE-IMG-VPLPKVWEALLPDHSLEI  308 (459)
T ss_pred             cchHHhhhheeEccCCceecchhHHHHHHHHHH----HHHhhhcccCCCCCHHHHHH-HcC-CChHHHHHHHhhhcchhH
Confidence            344455789999999999994 2 233355444    22210     0000 11111 134 2334555555432 2111


Q ss_pred             CHHHH----HHHHH-----hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCC
Q 028576          121 DLEGL----KICMK-----KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSK  190 (207)
Q Consensus       121 ~~~~l----~~~~~-----~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KP  190 (207)
                       .++.    .+.+.     ....++||+.++|++|+++|++++|+||++.. ....++.+++.+|||.+++++++. .||
T Consensus       309 -~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-~~~  386 (459)
T PRK06698        309 -REQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-SLN  386 (459)
T ss_pred             -HHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-CCC
Confidence             1111    11111     23478999999999999999999999999854 556789999999999999999884 478


Q ss_pred             ChHHHHHhhhh
Q 028576          191 QCLKERGNLIL  201 (207)
Q Consensus       191 dPeiy~~~~~~  201 (207)
                      +|++|+.++.-
T Consensus       387 kP~~~~~al~~  397 (459)
T PRK06698        387 KSDLVKSILNK  397 (459)
T ss_pred             CcHHHHHHHHh
Confidence            88999988853

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.66  E-value=1.8e-15  Score=131.41  Aligned_cols=70  Identities=10%  Similarity=-0.098  Sum_probs=55.9

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccC--eEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLS--WTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD--~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++.. ...+++.+....+|+  .++++++++..||+|++|..++...
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~  215 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETL  215 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHh
Confidence            478999999999999999999999998754 445666653334444  2448999999999999999998764

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.63  E-value=1.8e-15  Score=118.46  Aligned_cols=68  Identities=19%  Similarity=0.252  Sum_probs=58.7

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++.. ....++.+ +.++|+.++++++++ .||+|++|+.++...
T Consensus        63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~  131 (154)
T TIGR01549        63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESL  131 (154)
T ss_pred             heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHc
Confidence            356799999999999999999999999754 44456666 889999999999999 999999999998754

HAD subfamilies caused by an overly broad single model.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.62  E-value=2.5e-15  Score=150.27  Aligned_cols=140  Identities=12%  Similarity=0.119  Sum_probs=92.5

Q ss_pred             CCCCeEEEEcCCcccCC-Ch-hchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CC-CCCHHH--
Q 028576           54 RKLPILLFDIMDTIVRD-PF-YHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GR-PFDLEG--  124 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~-~~-~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~-~~~~~~--  124 (207)
                      +++++|||||||||+|+ +. ..++.+++   |.+.       ....+..+ .| .+..++++.+... +. ..+.++  
T Consensus        73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~i-------t~e~~~~~-~G-~~~~~~~~~~~~~~~l~~~~~~~~~  143 (1057)
T PLN02919         73 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEV-------TVEDFVPF-MG-TGEANFLGGVASVKGVKGFDPDAAK  143 (1057)
T ss_pred             CCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCC-------CHHHHHHH-hC-CCHHHHHHHHHHhcCCCCCCHHHHH
Confidence            58899999999999994 22 33455554   3221       11112111 23 2334444443322 21 112222  


Q ss_pred             --HHHHHHh------cCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcc-cccCeEEEccccCCCCCChHH
Q 028576          125 --LKICMKK------GYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKIS-TYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       125 --l~~~~~~------~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~-~yFD~v~~S~evg~~KPdPei  194 (207)
                        +.+.+.+      ...++||+.++|++|+++|++++|+||+.. .....++++++. .|||.++++++++..||+|++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~  223 (1057)
T PLN02919        144 KRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI  223 (1057)
T ss_pred             HHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHH
Confidence              1111111      123689999999999999999999999974 455577899995 799999999999999999999


Q ss_pred             HHHhhhhh
Q 028576          195 ERGNLILI  202 (207)
Q Consensus       195 y~~~~~~~  202 (207)
                      |+.++...
T Consensus       224 ~~~a~~~l  231 (1057)
T PLN02919        224 FLAAAKIL  231 (1057)
T ss_pred             HHHHHHHc
Confidence            99998754

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.59  E-value=5.4e-14  Score=116.27  Aligned_cols=141  Identities=16%  Similarity=0.134  Sum_probs=92.4

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcC
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGY  133 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~  133 (207)
                      +++++++||+||||+|......+.+.+|.... .     ...+.++..|.++..+..+..+..-...+.+.+ ..+....
T Consensus        12 ~~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~-~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   84 (219)
T TIGR00338        12 RSKKLVVFDMDSTLINAETIDEIAKIAGVEEE-V-----SEITERAMRGELDFKASLRERVALLKGLPVELL-KEVRENL   84 (219)
T ss_pred             ccCCEEEEeCcccCCCchHHHHHHHHhCCHHH-H-----HHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHH-HHHHhcC
Confidence            55689999999999995322233333443211 1     123455667888887777655543111223333 3334456


Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEE-------Ec---cccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTF-------CS---CVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~-------~S---~evg~~KPdPeiy~~~~~~  201 (207)
                      .++||+.++|+.|+++|++++|+||+... ...+++.+++..+|+..+       .+   ......+|+|++|+.++..
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  163 (219)
T TIGR00338        85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK  163 (219)
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence            78999999999999999999999999755 445778899998886432       22   2233457889999987654

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.56  E-value=8.4e-14  Score=112.97  Aligned_cols=130  Identities=17%  Similarity=0.064  Sum_probs=88.4

Q ss_pred             CCeEEEEcCCcccCCC-hhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc--C--CCCCHHHHHHHHH
Q 028576           56 LPILLFDIMDTIVRDP-FYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD--G--RPFDLEGLKICMK  130 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~-~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~--g--~~~~~~~l~~~~~  130 (207)
                      +++|+||+||||+|.. ....+...+|......      ..+..+..|.++..++.+..++.  +  .....+.+... .
T Consensus         4 ~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   76 (201)
T TIGR01491         4 IKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAK------KNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEI-F   76 (201)
T ss_pred             ceEEEEeCCCCCcCCccHHHHHHHHhCchHHHH------HHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHH-H
Confidence            5789999999999932 2222333344321110      11234567888887776543221  1  12233344443 3


Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCCh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQC  192 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdP  192 (207)
                      ....++||+.++|+.|+++|++++|+||+... .+.+++++|+..+|+..+.+++.|..||++
T Consensus        77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~  139 (201)
T TIGR01491        77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDG  139 (201)
T ss_pred             HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecce
Confidence            44678999999999999999999999999855 555778999999999888888888888775

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PHA02597 30

Probab=99.54  E-value=4.5e-14  Score=115.21  Aligned_cols=130  Identities=11%  Similarity=0.142  Sum_probs=76.6

Q ss_pred             CCeEEEEcCCcccCCChhchHHHHH---cCCHHHHHHhhCchHHHHH--HhCCCCHHHHHHHHhhcCCCCCHHHHH-HHH
Q 028576           56 LPILLFDIMDTIVRDPFYHDVPAFF---GMSMKELIECKHPNAWIEF--EMGMISEMELARKFFTDGRPFDLEGLK-ICM  129 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~~~~l~~~~---g~~~~~~~~~~~~~~w~~~--e~G~Is~~e~~~~~~~~g~~~~~~~l~-~~~  129 (207)
                      +++||||+||||+|  +..++..++   |.+.+++...+........  ..| .+.++. ..+++.        +. ..+
T Consensus         2 ~k~viFDlDGTLiD--~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~-~~~~~~--------~~~~~~   69 (197)
T PHA02597          2 KPTILTDVDGVLLS--WQSGLPYFAQKYNIPTDHILKMIQDERFRDPGELFG-CDQELA-KKLIEK--------YNNSDF   69 (197)
T ss_pred             CcEEEEecCCceEc--hhhccHHHHHhcCCCHHHHHHHHhHhhhcCHHHHhc-ccHHHH-HHHhhh--------hhHHHH
Confidence            57999999999999  333343333   5555544433222111110  011 111111 111110        01 122


Q ss_pred             HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHHhCCccc----ccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          130 KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEI-IEDKLKIST----YLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       130 ~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~~~~l~~----yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .....++||+.++|++|+++ ++++++||++...+. .++.+++..    +|+.++++++   .||+|++|+.++..
T Consensus        70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~  142 (197)
T PHA02597         70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEK  142 (197)
T ss_pred             HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHH
Confidence            33456899999999999987 678999998744343 456677765    4566777666   37789999998864

2 hypothetical protein; Provisional

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.53  E-value=2.1e-13  Score=117.90  Aligned_cols=68  Identities=12%  Similarity=0.076  Sum_probs=55.6

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+++|++++|+||+... ....++++|+.+||+.+++++++.   |.|++|+.++...
T Consensus       140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~---~k~~~~~~~l~~~  208 (273)
T PRK13225        140 ALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL---SKRRALSQLVARE  208 (273)
T ss_pred             cCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC---CCHHHHHHHHHHh
Confidence            3467999999999999999999999999755 555789999999999988776653   4468888877643

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.52  E-value=9.8e-14  Score=116.63  Aligned_cols=140  Identities=17%  Similarity=0.120  Sum_probs=96.4

Q ss_pred             CCCCeEEEEcCCcccCCC-h-hchHHHHHcCCHHHHHHhhCc-hHHH--HHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH
Q 028576           54 RKLPILLFDIMDTIVRDP-F-YHDVPAFFGMSMKELIECKHP-NAWI--EFEMGMISEMELARKFFTD-GRPFDLEGLKI  127 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~-~-~~~l~~~~g~~~~~~~~~~~~-~~w~--~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~  127 (207)
                      .+..+++||+||||+|+. . .+.+...+        ..++. -.|.  ..-.|.-+ .|..+.++.. ..+.+.+++..
T Consensus         8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~--------~~ygk~~~~~~~~~~mG~~~-~eaa~~~~~~~~dp~s~ee~~~   78 (222)
T KOG2914|consen    8 LKVSACLFDMDGTLVDTEDLYTEAWQELL--------DRYGKPYPWDVKVKSMGKRT-SEAARLFVKKLPDPVSREEFNK   78 (222)
T ss_pred             cceeeEEEecCCcEEecHHHHHHHHHHHH--------HHcCCCChHHHHHHHcCCCH-HHHHHHHHhhcCCCCCHHHHHH
Confidence            456699999999999942 2 22233333        22221 1122  23446444 4777777643 45566666643


Q ss_pred             HH-------HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhC-CcccccCeEEE--ccccCCCCCChHHHH
Q 028576          128 CM-------KKGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKL-KISTYLSWTFC--SCVIGMFSKQCLKER  196 (207)
Q Consensus       128 ~~-------~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~-~l~~yFD~v~~--S~evg~~KPdPeiy~  196 (207)
                      ..       .....++||+.++++.|+.+|++++++||.++ .+....+.+ ++...|++++.  ..++...||+|++|+
T Consensus        79 e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l  158 (222)
T KOG2914|consen   79 EEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYL  158 (222)
T ss_pred             HHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHH
Confidence            32       23356789999999999999999999999864 344433444 48888999999  889999999999999


Q ss_pred             Hhhhhh
Q 028576          197 GNLILI  202 (207)
Q Consensus       197 ~~~~~~  202 (207)
                      .|..++
T Consensus       159 ~A~~~l  164 (222)
T KOG2914|consen  159 KAAKRL  164 (222)
T ss_pred             HHHHhc
Confidence            998765

>PLN02954 phosphoserine phosphatase

Probab=99.51  E-value=5.6e-13  Score=110.58  Aligned_cols=140  Identities=12%  Similarity=0.046  Sum_probs=89.2

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhc-
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKG-  132 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~-  132 (207)
                      +++++|+||+||||+|+.....+.+.+|... +..     ....++..|.++..+.++..+..- ....+.+...+... 
T Consensus        10 ~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~-~~~-----~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   82 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDEGIDELAEFCGAGE-AVA-----EWTAKAMGGSVPFEEALAARLSLF-KPSLSQVEEFLEKRP   82 (224)
T ss_pred             ccCCEEEEeCCCcccchHHHHHHHHHcCChH-HHH-----HHHHHHHCCCCCHHHHHHHHHHHc-CCCHHHHHHHHHHcc
Confidence            5578999999999999533222333344321 111     113345568888777776655431 12345555554432 


Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcc--cccCeE--------EEccc----cCCCCCChHHHHH
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIS--TYLSWT--------FCSCV----IGMFSKQCLKERG  197 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~--~yFD~v--------~~S~e----vg~~KPdPeiy~~  197 (207)
                      ..++||+.++|+.|+++|++++|+||+... .+.+++.+|+.  ++|+..        +.+.+    ....+|+|++++.
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~  162 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH  162 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence            468899999999999999999999999855 55577888886  466431        12221    1235677888887


Q ss_pred             hhh
Q 028576          198 NLI  200 (207)
Q Consensus       198 ~~~  200 (207)
                      ++.
T Consensus       163 ~~~  165 (224)
T PLN02954        163 IKK  165 (224)
T ss_pred             HHH
Confidence            654

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.46  E-value=6.7e-13  Score=110.51  Aligned_cols=130  Identities=13%  Similarity=0.010  Sum_probs=87.5

Q ss_pred             CeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCcc
Q 028576           57 PILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYL  136 (207)
Q Consensus        57 ~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~~  136 (207)
                      .+|+||+||||++......+.+-++.  ...     .....++..|+++-.+..+..++.-.....+++.+.+.....++
T Consensus         4 ~~vifDfDgTi~~~d~~~~~~~~~~~--~~~-----~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~   76 (219)
T PRK09552          4 IQIFCDFDGTITNNDNIIAIMKKFAP--PEW-----EELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLETAEIR   76 (219)
T ss_pred             cEEEEcCCCCCCcchhhHHHHHHhCH--HHH-----HHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhCCCcC
Confidence            38999999999994221121111211  111     11233455699988888888776521222355666666667899


Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc--cc--CeEEEccccCCCCCChHH
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST--YL--SWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~--yF--D~v~~S~evg~~KPdPei  194 (207)
                      ||+.++|+.|+++|++++|+||+... ++.+++++ +..  ++  +..+.++.+...||+|++
T Consensus        77 pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~  138 (219)
T PRK09552         77 EGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCD  138 (219)
T ss_pred             cCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcc
Confidence            99999999999999999999999854 55577776 533  33  555677778888999875

>PLN02811 hydrolase

Probab=99.45  E-value=5e-13  Score=111.25  Aligned_cols=71  Identities=7%  Similarity=-0.008  Sum_probs=60.5

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHH-HHHhCCcccccCeEEEcc--ccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEI-IEDKLKISTYLSWTFCSC--VIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~-il~~~~l~~yFD~v~~S~--evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+++|++++|+||+.. .... ..+..++.++|+.+++++  +++..||+|++|+.++...
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~  150 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRF  150 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHh
Confidence            457889999999999999999999999864 3433 334457889999999999  8999999999999998764

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.42  E-value=4.4e-12  Score=101.65  Aligned_cols=118  Identities=11%  Similarity=0.093  Sum_probs=73.8

Q ss_pred             eEEEEcCCcccCCChhchHHHHHcCC-HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCcc
Q 028576           58 ILLFDIMDTIVRDPFYHDVPAFFGMS-MKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYL  136 (207)
Q Consensus        58 ~IlFDLDGTLvD~~~~~~l~~~~g~~-~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~~  136 (207)
                      +|+||+||||+|......+.+.++.. .+++...     |.. ..+..+..+.+...+.. ...+.+.+.....+ ..++
T Consensus         3 ~iiFD~dgTL~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~l~   74 (188)
T TIGR01489         3 VVVSDFDGTITLNDSDDWITDKFGPPEANRLLDG-----VLS-KTLSIKFMDRRMKGLLP-SGLKEDEILEVLKS-APID   74 (188)
T ss_pred             EEEEeCCCcccCCCchHHHHHhcCcchhhHHHHH-----Hhh-cCCchHHHHHHHHHHhh-cCCCHHHHHHHHHh-CCCC
Confidence            68999999999954433344444321 1222211     211 00122223333333322 12334455554443 5889


Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEcc
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~  183 (207)
                      ||+.++|+.|+++|++++|+||+... ++.+++++++.++|+.+++++
T Consensus        75 ~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~  122 (188)
T TIGR01489        75 PGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNP  122 (188)
T ss_pred             ccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccC
Confidence            99999999999999999999999754 555778899999999999643

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.35  E-value=8.8e-12  Score=105.93  Aligned_cols=65  Identities=8%  Similarity=-0.003  Sum_probs=55.0

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCc----HHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNY----PIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGN  198 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~----~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~  198 (207)
                      .+.+++.++|++|+++|++++++||+    ++. ...+++++|+.++|+.++++++.+..||+|+.+...
T Consensus       114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~  183 (237)
T TIGR01672       114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQD  183 (237)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHh
Confidence            46678999999999999999999997    433 444678899999999999999999999999865543

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.32  E-value=1.3e-11  Score=102.54  Aligned_cols=129  Identities=10%  Similarity=-0.027  Sum_probs=84.6

Q ss_pred             EEEEcCCcccCCCh-hchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCcch
Q 028576           59 LLFDIMDTIVRDPF-YHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYLD  137 (207)
Q Consensus        59 IlFDLDGTLvD~~~-~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~~p  137 (207)
                      |+||+||||.+.+. ..-+.. ++.  +.+.     ....++..|.++..+.+++.++.-.....+++.+.+.....++|
T Consensus         2 ~~fDFDgTit~~d~~~~~~~~-~~~--~~~~-----~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~p   73 (214)
T TIGR03333         2 IICDFDGTITNNDNIISIMKQ-FAP--PEWE-----ALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEITSFVLETAEIRE   73 (214)
T ss_pred             EEeccCCCCCcchhHHHHHHH-hCc--HHHH-----HHHHHHHcCCccHHHHHHHHHhhCCCchHHHHHHHHHhcCcccc
Confidence            79999999998322 111221 111  1111     11224456888887888777754111123455555445578999


Q ss_pred             hHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccccc---CeEEEccccCCCCCChHHH
Q 028576          138 GVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYL---SWTFCSCVIGMFSKQCLKE  195 (207)
Q Consensus       138 gv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yF---D~v~~S~evg~~KPdPeiy  195 (207)
                      |+.++|+.|+++|++++|+||+... ++.+++.++...++   +.++.++.+...||+|+++
T Consensus        74 g~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~  135 (214)
T TIGR03333        74 GFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDG  135 (214)
T ss_pred             cHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCcc
Confidence            9999999999999999999999854 55566776444444   4566677778889999876

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.30  E-value=6e-12  Score=98.87  Aligned_cols=69  Identities=12%  Similarity=-0.043  Sum_probs=51.8

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCccc---ccCeEEEccccCCCCCChHH
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKIST---YLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~---yFD~v~~S~evg~~KPdPei  194 (207)
                      .++||+.++|+.|+++||+++|+||++.                .....++.+++..   |+..+..+++.+..||+|++
T Consensus        27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~  106 (147)
T TIGR01656        27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL  106 (147)
T ss_pred             EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence            4789999999999999999999999762                2333557788741   22222235677889999999


Q ss_pred             HHHhhhhh
Q 028576          195 ERGNLILI  202 (207)
Q Consensus       195 y~~~~~~~  202 (207)
                      |+.++...
T Consensus       107 ~~~~~~~~  114 (147)
T TIGR01656       107 ILEALKRL  114 (147)
T ss_pred             HHHHHHHc
Confidence            99998753

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.29  E-value=6.3e-11  Score=104.87  Aligned_cols=141  Identities=11%  Similarity=0.096  Sum_probs=89.8

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcC
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGY  133 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~  133 (207)
                      ++++.|+|||||||+.......+.+.+|...+..      .......+|+++..+.+++.+..-...+ +...+.+.+..
T Consensus       108 ~~~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~------~it~~~m~Geldf~esl~~rv~~l~g~~-~~il~~v~~~l  180 (322)
T PRK11133        108 RTPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVA------EVTERAMRGELDFEASLRQRVATLKGAD-ANILQQVRENL  180 (322)
T ss_pred             cCCCEEEEECCCCCcchHHHHHHHHHhCCchHHH------HHHHHHHcCCcCHHHHHHHHHHHhCCCC-HHHHHHHHHhC
Confidence            6779999999999996322222333444432211      1122345688888776665443211111 22223334557


Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHhCCccccc-------CeEEEcc---ccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDKLKISTYL-------SWTFCSC---VIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~~~l~~yF-------D~v~~S~---evg~~KPdPeiy~~~~~~  201 (207)
                      .++||+.++|+.|++.|++++|+||+...+. .+++++++...+       |..+++.   ++...||+|++++.++.-
T Consensus       181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~  259 (322)
T PRK11133        181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE  259 (322)
T ss_pred             CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence            7999999999999999999999999986544 466778876544       2333333   233578999999987653

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.29  E-value=2.8e-12  Score=104.19  Aligned_cols=67  Identities=10%  Similarity=0.034  Sum_probs=59.2

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCc-HH-HHHHHHHhCCcc---------cccCeEEEccccCCCCCChHHHHHhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNY-PI-WYEIIEDKLKIS---------TYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~-~~-~~~~il~~~~l~---------~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                      ..++||+.++|+.|+++|++++|+||+ .. ..+.+++.+++.         +|||.++++++.+..||+|++++.+.
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~  121 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN  121 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence            368899999999999999999999987 64 455677899998         99999999999999999999988764

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.26  E-value=3e-11  Score=97.78  Aligned_cols=67  Identities=13%  Similarity=-0.092  Sum_probs=53.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCcccccCeEEEc-----cccCCCCCCh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKISTYLSWTFCS-----CVIGMFSKQC  192 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~yFD~v~~S-----~evg~~KPdP  192 (207)
                      .++||+.++|++|+++|++++|+||++.                ++...++++++  +|+.++.+     ++++..||+|
T Consensus        29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p  106 (181)
T PRK08942         29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKP  106 (181)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCH
Confidence            5789999999999999999999999852                22334566676  48888765     4578899999


Q ss_pred             HHHHHhhhhh
Q 028576          193 LKERGNLILI  202 (207)
Q Consensus       193 eiy~~~~~~~  202 (207)
                      ++|+.++...
T Consensus       107 ~~~~~~~~~l  116 (181)
T PRK08942        107 GMLLSIAERL  116 (181)
T ss_pred             HHHHHHHHHc
Confidence            9999998654

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.26  E-value=1.7e-11  Score=94.51  Aligned_cols=66  Identities=6%  Similarity=0.028  Sum_probs=55.6

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCc-HHHHH-HHHHhCC-------cccccCeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNY-PIWYE-IIEDKLK-------ISTYLSWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~-~~~~~-~il~~~~-------l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      .++||+.++|++|+++|++++|+||+ +.... .+++..+       +.+||+.++++++    ||+|++|+.++...-
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg  103 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLN  103 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhc
Confidence            47899999999999999999999999 55444 4667777       8999999998864    599999999987653

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.25  E-value=1.7e-11  Score=98.66  Aligned_cols=67  Identities=16%  Similarity=0.012  Sum_probs=55.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-------------HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-------------WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLI  200 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-------------~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~  200 (207)
                      .++||+.++|+.|+++||+++|+||++.             .++.+++++++.  ++.++++++...+||+|++|+.++.
T Consensus        42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~  119 (166)
T TIGR01664        42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLYRKPMTGMWEYLQS  119 (166)
T ss_pred             EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCCCCCccHHHHHHHH
Confidence            3689999999999999999999999864             245567889984  3677778877789999999999876


Q ss_pred             hh
Q 028576          201 LI  202 (207)
Q Consensus       201 ~~  202 (207)
                      ..
T Consensus       120 ~~  121 (166)
T TIGR01664       120 QY  121 (166)
T ss_pred             Hc
Confidence            53

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.24  E-value=2.2e-10  Score=93.60  Aligned_cols=113  Identities=12%  Similarity=0.119  Sum_probs=70.0

Q ss_pred             CCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc--CCCCCHHHHHHHHHhcC
Q 028576           56 LPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD--GRPFDLEGLKICMKKGY  133 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~--g~~~~~~~l~~~~~~~~  133 (207)
                      ++.|+|||||||++..+. .+.+.+|.+..          | .+.+|.++..+.+....+.  ....+.+++...+ +..
T Consensus         1 ~~~v~FD~DGTL~~~~~~-~~~~~~g~~~~----------~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~-~~~   67 (205)
T PRK13582          1 MEIVCLDLEGVLVPEIWI-AFAEKTGIPEL----------R-ATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVI-ATL   67 (205)
T ss_pred             CeEEEEeCCCCChhhHHH-HHHHHcCChHH----------H-HHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHH-HhC
Confidence            468999999999964332 23333454321          1 1112333333333322221  1123445554443 345


Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S  182 (207)
                      .++||+.++|+.|+++ ++++|+||+... .+.+++++++..+|+..+..
T Consensus        68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~  116 (205)
T PRK13582         68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEV  116 (205)
T ss_pred             CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEE
Confidence            7899999999999999 999999999865 44577899999888754433

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.21  E-value=2e-10  Score=96.57  Aligned_cols=67  Identities=10%  Similarity=0.081  Sum_probs=55.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHHhC---CcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEI-IEDKL---KISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~~~---~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|++|+++|++++|+||++...+. ++++.   ++.+||+.+|. +.+| .||+|++|+.++..+
T Consensus        95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd-~~~g-~KP~p~~y~~i~~~l  165 (220)
T TIGR01691        95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFD-TTVG-LKTEAQSYVKIAGQL  165 (220)
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEE-eCcc-cCCCHHHHHHHHHHh
Confidence            58999999999999999999999999866554 45554   68888998774 4455 799999999998754

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.21  E-value=8.8e-11  Score=89.96  Aligned_cols=65  Identities=15%  Similarity=0.066  Sum_probs=52.6

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH--------H-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP--------I-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~--------~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|++|+++|++++++||++        . .++..++.+++.  |+.++.+.  +..||+|++|+.++...
T Consensus        25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~   98 (132)
T TIGR01662        25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HCRKPKPGMFLEALKRF   98 (132)
T ss_pred             eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CCCCCChHHHHHHHHHc
Confidence            477999999999999999999999987        3 355567888885  45455454  78899999999998765

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.17  E-value=8e-10  Score=87.94  Aligned_cols=118  Identities=18%  Similarity=0.131  Sum_probs=78.0

Q ss_pred             EEEEcCCcccCCCh-hchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHH-HHHhcCCcc
Q 028576           59 LLFDIMDTIVRDPF-YHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKI-CMKKGYAYL  136 (207)
Q Consensus        59 IlFDLDGTLvD~~~-~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~-~~~~~~~~~  136 (207)
                      ++||+||||++... ..-+...++.. ++..     .....+.+|+++..+..++.+..-.....+++.+ .+.+...++
T Consensus         2 ~~fD~DgTl~~~~s~~~~~~~~~~~~-~~~~-----~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (177)
T TIGR01488         2 AIFDFDGTLTRQDSLIDLLAKLLGTN-DEVI-----ELTRLAPSGRISFEDALGRRLALLHRSRSEEVAKEFLARQVALR   75 (177)
T ss_pred             EEecCccccccchhhHHHHHHHhCCh-HHHH-----HHHHHHHCCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHhcCCcC
Confidence            79999999998422 22233333321 1111     1233556799998888866554311112245555 455667788


Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEc
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S  182 (207)
                      ||+.++++.|+++|++++|+|++... ++.+++++++..+|...+..
T Consensus        76 ~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~  122 (177)
T TIGR01488        76 PGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEF  122 (177)
T ss_pred             cCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEE
Confidence            99999999999999999999999755 45577888988877654443

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.08  E-value=2.9e-09  Score=88.42  Aligned_cols=129  Identities=10%  Similarity=0.064  Sum_probs=79.5

Q ss_pred             CeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc--CCCCCHHHHHHHHHhcCC
Q 028576           57 PILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD--GRPFDLEGLKICMKKGYA  134 (207)
Q Consensus        57 ~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~--g~~~~~~~l~~~~~~~~~  134 (207)
                      ..++|||||||++..| ..+....|......           ..+|.+..+++.+.....  ....+.+.+.+... ...
T Consensus         2 ~la~FDlD~TLi~~~w-~~~~~~~g~~~~~~-----------~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~-~i~   68 (203)
T TIGR02137         2 EIACLDLEGVLVPEIW-IAFAEKTGIDALKA-----------TTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA-TLK   68 (203)
T ss_pred             eEEEEeCCcccHHHHH-HHHHHHcCCcHHHH-----------HhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH-hCC
Confidence            5699999999998411 11222224322111           234555555555432221  01234455555443 457


Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHhCCcccccC--------eEEEccccCCCCCChHHHHHhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDKLKISTYLS--------WTFCSCVIGMFSKQCLKERGNLI  200 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~~~l~~yFD--------~v~~S~evg~~KPdPeiy~~~~~  200 (207)
                      ++||+.++|+.|+++| +++|+||+...+. .+++++|+..+|.        ..++...+ ..||++..+..++.
T Consensus        69 l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~  141 (203)
T TIGR02137        69 PLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFK  141 (203)
T ss_pred             CCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHHH
Confidence            8999999999999975 9999999986644 4789999988886        22222222 46788887777653

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.07  E-value=4.9e-10  Score=83.52  Aligned_cols=70  Identities=21%  Similarity=0.199  Sum_probs=60.2

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCC----------------CCChHHH
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMF----------------SKQCLKE  195 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~----------------KPdPeiy  195 (207)
                      ..+++++.++|+.|+++|++++++||.+. .....++..++..+|+.+++++.....                ||+++.+
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL  102 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence            36889999999999999999999999874 455577888998899999999888776                9999999


Q ss_pred             HHhhhhh
Q 028576          196 RGNLILI  202 (207)
Q Consensus       196 ~~~~~~~  202 (207)
                      ..++...
T Consensus       103 ~~~~~~~  109 (139)
T cd01427         103 LAALKLL  109 (139)
T ss_pred             HHHHHHc
Confidence            9887764

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK11590 hypothetical protein; Provisional

Probab=99.05  E-value=1.1e-09  Score=90.93  Aligned_cols=50  Identities=16%  Similarity=-0.049  Sum_probs=38.7

Q ss_pred             CCcchhHHHHH-HHHhHCCCeEEEEcCcHHHHH-HHHHhCCcccccCeEEEcc
Q 028576          133 YAYLDGVEELL-HELKQSNYEMHAFTNYPIWYE-IIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       133 ~~~~pgv~elL-~~Lk~~G~kl~IlTN~~~~~~-~il~~~~l~~yFD~v~~S~  183 (207)
                      ..++||+.++| +.|+++|++++|+||+++.+. .+++.+++.. .++++++.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~  145 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQ  145 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEE
Confidence            46799999999 578889999999999986644 4777778633 55666665

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.04  E-value=1.4e-09  Score=92.48  Aligned_cols=114  Identities=11%  Similarity=0.001  Sum_probs=73.4

Q ss_pred             CCeEEEEcCCcccCC-ChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCC
Q 028576           56 LPILLFDIMDTIVRD-PFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYA  134 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~  134 (207)
                      ..+|+||+|||++|+ +....-...++...++         |       ++.+++++.+.+....            ...
T Consensus        63 p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~---------y-------~~~~~fw~~y~~~~~~------------~a~  114 (237)
T PRK11009         63 PMAVGFDIDDTVLFSSPGFWRGKKTFSPGSED---------Y-------LKNQKFWEKMNNGWDE------------FSI  114 (237)
T ss_pred             CcEEEEECcCccccCCchheeeeeccCCCccc---------c-------cChHHHHHHHHhcccc------------cCc
Confidence            348999999999994 3221111112111000         1       3445565555432111            136


Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HH-HHHHHHhCCc--ccccCeEEEccccCCCCCChHHHHHhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IW-YEIIEDKLKI--STYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~-~~~il~~~~l--~~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                      ++||+.++|+.|+++|++++++||..    +. ...+++.+++  .++|+.++++++.  .||++......+
T Consensus       115 p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~~~  184 (237)
T PRK11009        115 PKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLKKK  184 (237)
T ss_pred             chHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHHhc
Confidence            88999999999999999999999952    33 3345667999  8999988887753  788887655443

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.99  E-value=6.9e-09  Score=86.55  Aligned_cols=68  Identities=18%  Similarity=0.085  Sum_probs=56.1

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEccccC------CCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIG------MFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S~evg------~~KPdPeiy~~~~~~~  202 (207)
                      ..|-+-.+++|-.|++++  ..+.||+. .++.++++++|+.+.||++++-+...      ..||+++.|+.|....
T Consensus        99 LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~a  173 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVA  173 (244)
T ss_pred             cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHh
Confidence            456677899999998874  78999997 45667899999999999988766555      4799999999998654

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.98  E-value=1.1e-08  Score=85.61  Aligned_cols=124  Identities=15%  Similarity=0.086  Sum_probs=78.6

Q ss_pred             CCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCC
Q 028576           55 KLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYA  134 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~  134 (207)
                      ..+.++|||||||++......+...+|...+.. ..     -...-.|.++.++..+.....-...+.+.++....+...
T Consensus         4 ~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~-~~-----t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~~~   77 (212)
T COG0560           4 MKKLAVFDLDGTLINAELIDELARGAGVGEEVL-AI-----TERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEFLR   77 (212)
T ss_pred             ccceEEEecccchhhHHHHHHHHHHhCCHHHHH-HH-----HHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhcCc
Confidence            346899999999999111111233334322211 11     112234555555555554443112234444444444378


Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHhCCcccccCeEEEccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDKLKISTYLSWTFCSCV  184 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~~~l~~yFD~v~~S~e  184 (207)
                      +.||+.++++.|+++|++++|+|.++..+. .+.+.+|++..+...+..++
T Consensus        78 l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d  128 (212)
T COG0560          78 LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD  128 (212)
T ss_pred             CCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC
Confidence            899999999999999999999999997655 47789999888876666665

>PRK06769 hypothetical protein; Validated

Probab=98.93  E-value=1.4e-09  Score=87.77  Aligned_cols=69  Identities=10%  Similarity=-0.058  Sum_probs=54.2

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH---------HHHHHHhCCcccccCeEE-EccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW---------YEIIEDKLKISTYLSWTF-CSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~---------~~~il~~~~l~~yFD~v~-~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|++|+++|++++|+||++..         +...++.+++.++|..+. ++++++..||+|++|+.++...
T Consensus        28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l  106 (173)
T PRK06769         28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKH  106 (173)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHc
Confidence            57899999999999999999999998631         223356777766654333 5677889999999999998754

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.92  E-value=3.6e-09  Score=84.80  Aligned_cols=67  Identities=16%  Similarity=0.001  Sum_probs=56.0

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH----------------HHHHHHHHhCCcccccCeEEE-----ccccCCCCCCh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP----------------IWYEIIEDKLKISTYLSWTFC-----SCVIGMFSKQC  192 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~----------------~~~~~il~~~~l~~yFD~v~~-----S~evg~~KPdP  192 (207)
                      .++||+.++|++|+++||+++|+||++                ..+..+++.+|+.  ||.++.     |++++..||+|
T Consensus        29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~  106 (161)
T TIGR01261        29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKI  106 (161)
T ss_pred             eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCH
Confidence            588999999999999999999999962                2345567889985  886654     58999999999


Q ss_pred             HHHHHhhhhh
Q 028576          193 LKERGNLILI  202 (207)
Q Consensus       193 eiy~~~~~~~  202 (207)
                      ++|+.++...
T Consensus       107 ~~~~~~~~~~  116 (161)
T TIGR01261       107 KLLEPYLKKN  116 (161)
T ss_pred             HHHHHHHHHc
Confidence            9999987653

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.92  E-value=3.5e-09  Score=85.45  Aligned_cols=67  Identities=19%  Similarity=0.203  Sum_probs=53.0

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCcccccCeEEEc-----------cccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKISTYLSWTFCS-----------CVIG  186 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~yFD~v~~S-----------~evg  186 (207)
                      .++||+.++|++|+++||+++|+||++.                .+..+++..++.  ||.++.+           ++.+
T Consensus        26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~  103 (176)
T TIGR00213        26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCD  103 (176)
T ss_pred             EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCC
Confidence            5789999999999999999999999873                223345566664  7777654           3666


Q ss_pred             CCCCChHHHHHhhhhh
Q 028576          187 MFSKQCLKERGNLILI  202 (207)
Q Consensus       187 ~~KPdPeiy~~~~~~~  202 (207)
                      .+||+|++|+.++...
T Consensus       104 ~~KP~p~~~~~a~~~~  119 (176)
T TIGR00213       104 CRKPKPGMLLQARKEL  119 (176)
T ss_pred             CCCCCHHHHHHHHHHc
Confidence            8999999999998754

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=98.91  E-value=2.6e-08  Score=81.15  Aligned_cols=45  Identities=9%  Similarity=0.008  Sum_probs=38.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCe
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSW  178 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~  178 (207)
                      .++||+.++|+.++++|++++|+||++.. ...+.+.+++.++|..
T Consensus        87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~  132 (202)
T TIGR01490        87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT  132 (202)
T ss_pred             hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec
Confidence            57899999999999999999999999865 4446688899888765

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PRK08238 hypothetical protein; Validated

Probab=98.87  E-value=4.2e-08  Score=91.20  Aligned_cols=58  Identities=12%  Similarity=0.074  Sum_probs=50.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHH
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPei  194 (207)
                      .++||+.++|++++++|++++|+||+++. .+.+.+++|+   ||.++++++....||++..
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~  130 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKA  130 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHH
Confidence            46799999999999999999999999865 4457788887   9999999999889887654

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.86  E-value=3.2e-08  Score=84.01  Aligned_cols=114  Identities=20%  Similarity=0.276  Sum_probs=77.0

Q ss_pred             eEEEEcCCcccCCChhchHHHHHcCC--HHHHHHhhCchHHHHHHhCCCCH--HHHHHHHhhcCCCCCHHHHHHHHHhcC
Q 028576           58 ILLFDIMDTIVRDPFYHDVPAFFGMS--MKELIECKHPNAWIEFEMGMISE--MELARKFFTDGRPFDLEGLKICMKKGY  133 (207)
Q Consensus        58 ~IlFDLDGTLvD~~~~~~l~~~~g~~--~~~~~~~~~~~~w~~~e~G~Is~--~e~~~~~~~~g~~~~~~~l~~~~~~~~  133 (207)
                      .|+||+|+||+|.+-...+.+.++..  .+++.+.        +..|.+++  ...++.+...|  .+.+++.+.+. ..
T Consensus         2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~--------~~~~~wt~~m~~vl~~L~~~g--vt~~~I~~~l~-~i   70 (234)
T PF06888_consen    2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRES--------YPKGGWTEYMDRVLQLLHEQG--VTPEDIRDALR-SI   70 (234)
T ss_pred             EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHh--------ccccchHHHHHHHHHHHHHcC--CCHHHHHHHHH-cC
Confidence            58999999999955555554455332  1333332        22233332  13333333323  55677777664 45


Q ss_pred             CcchhHHHHHHHH--hHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEc
Q 028576          134 AYLDGVEELLHEL--KQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       134 ~~~pgv~elL~~L--k~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S  182 (207)
                      .+.||+.++++.+  ++.|+.+.|+|+++.. ++.++++.|+...|+.|++-
T Consensus        71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TN  122 (234)
T PF06888_consen   71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTN  122 (234)
T ss_pred             CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeC
Confidence            6789999999999  5579999999999865 55689999999999988765

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01684 viral_ppase viral phosphatase

Probab=98.68  E-value=3.3e-08  Score=86.19  Aligned_cols=70  Identities=13%  Similarity=0.056  Sum_probs=60.3

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhhcc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFIR  205 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~~~  205 (207)
                      -||+.++|++|+++|++++|+||+++ .....++.+|+.+|||.+++++++...||+|++.-.-.+.+|..
T Consensus       148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~  218 (301)
T TIGR01684       148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTK  218 (301)
T ss_pred             CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEec
Confidence            39999999999999999999999874 45567899999999999999999999999998765555555543

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=98.66  E-value=2.6e-07  Score=77.00  Aligned_cols=49  Identities=18%  Similarity=0.032  Sum_probs=36.3

Q ss_pred             CcchhHHHHHH-HHhHCCCeEEEEcCcHHHH-HHHHHhCCcccccCeEEEcc
Q 028576          134 AYLDGVEELLH-ELKQSNYEMHAFTNYPIWY-EIIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       134 ~~~pgv~elL~-~Lk~~G~kl~IlTN~~~~~-~~il~~~~l~~yFD~v~~S~  183 (207)
                      .++||+.++|+ .|+++|++++|+||+++.+ +.+.+..++.. .++++++.
T Consensus        94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~  144 (210)
T TIGR01545        94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQ  144 (210)
T ss_pred             CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEE
Confidence            57899999995 7888999999999998654 44555655533 24566554

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01686 FkbH FkbH-like domain

Probab=98.62  E-value=9.8e-08  Score=84.16  Aligned_cols=65  Identities=6%  Similarity=0.002  Sum_probs=55.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHh----CCcccccCeEEEccccCCCCCChHHHHHhhhhhhc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDK----LKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFI  204 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~----~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~~  204 (207)
                      +++|+.++|+.|+++|++++|+||++. ....++++    +++.+||+.+.++     .||+|+.++.++..+-+
T Consensus        32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i  101 (320)
T TIGR01686        32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNL  101 (320)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCC
Confidence            579999999999999999999999974 45567788    8999999988665     58999999999876543

The C-terminal portion of this domain is unique to this family (by BLAST).

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.52  E-value=1.3e-07  Score=74.50  Aligned_cols=65  Identities=17%  Similarity=0.116  Sum_probs=54.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc-ccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST-YLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~-yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|++|+ ++++++|+||++.. ++.+++++++.. +|+.+++++++...||+   |+.+|..+
T Consensus        45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l  111 (148)
T smart00577       45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLL  111 (148)
T ss_pred             EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe---EeecHHHc
Confidence            57899999999998 57999999999854 556788888865 56999999999999997   77777654

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.44  E-value=2.4e-07  Score=80.29  Aligned_cols=69  Identities=13%  Similarity=-0.034  Sum_probs=60.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHhCCccc-ccCeEEEcc-------ccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDKLKIST-YLSWTFCSC-------VIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~~~l~~-yFD~v~~S~-------evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|+.|+++|++++++||++.... ..++.+++.+ |||.+++++       +.+..||+|++++.+|...
T Consensus       187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~  264 (300)
T PHA02530        187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK  264 (300)
T ss_pred             CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence            5789999999999999999999999986544 4778889886 999999998       5678899999999999754

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.41  E-value=2.6e-06  Score=73.68  Aligned_cols=56  Identities=5%  Similarity=-0.094  Sum_probs=41.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH----HHHHHHhCCcccc-cCeEEEccccCCCCC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW----YEIIEDKLKISTY-LSWTFCSCVIGMFSK  190 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~----~~~il~~~~l~~y-FD~v~~S~evg~~KP  190 (207)
                      .++||+.++|+.|+++|++++++||....    ....++++|+..+ +++++.-. .+..||
T Consensus       118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~-~~~~K~  178 (266)
T TIGR01533       118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKK-DKSSKE  178 (266)
T ss_pred             CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCC-CCCCcH
Confidence            57899999999999999999999997521    2245678898665 46776654 334444

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.31  E-value=1.8e-06  Score=77.51  Aligned_cols=66  Identities=18%  Similarity=0.089  Sum_probs=52.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCc---------------H-HHHHHHHHhCCcccccCeEEE-----ccccCCCCCCh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNY---------------P-IWYEIIEDKLKISTYLSWTFC-----SCVIGMFSKQC  192 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~---------------~-~~~~~il~~~~l~~yFD~v~~-----S~evg~~KPdP  192 (207)
                      .++||+.++|++|+++|++++|+||+               + .....+++.+++  +|+.++.     +++.+.+||+|
T Consensus        30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd~~~~rKP~p  107 (354)
T PRK05446         30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPEDNCSCRKPKT  107 (354)
T ss_pred             eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcccCCCCCCCH
Confidence            68999999999999999999999995               1 123335677787  3777654     36788999999


Q ss_pred             HHHHHhhhh
Q 028576          193 LKERGNLIL  201 (207)
Q Consensus       193 eiy~~~~~~  201 (207)
                      ++++.++..
T Consensus       108 ~~l~~a~~~  116 (354)
T PRK05446        108 GLVEEYLAE  116 (354)
T ss_pred             HHHHHHHHH
Confidence            999988754

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.29  E-value=8e-07  Score=76.11  Aligned_cols=67  Identities=6%  Similarity=-0.127  Sum_probs=53.0

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHHhCCcccccCeEEEccccCC---CCCChHHHHHhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWYEI-IEDKLKISTYLSWTFCSCVIGM---FSKQCLKERGNLIL  201 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~~~~l~~yFD~v~~S~evg~---~KPdPeiy~~~~~~  201 (207)
                      .++++.+.++.|++.|++++++||+...+.. .....++..+|+.+.++.....   .||+|++|+.++..
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~  191 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRA  191 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHH
Confidence            3688999999999999999999998755442 3356788889987776655443   79999999999864

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.29  E-value=5e-06  Score=69.72  Aligned_cols=117  Identities=16%  Similarity=0.243  Sum_probs=76.9

Q ss_pred             CeEEEEcCCcccCCChhchHHHHHcC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCC
Q 028576           57 PILLFDIMDTIVRDPFYHDVPAFFGM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYA  134 (207)
Q Consensus        57 ~~IlFDLDGTLvD~~~~~~l~~~~g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~  134 (207)
                      -.+.||+|.||+|..-...+...++-  .++++...+....|.++-      ..+++++-++|  ...+++++.+.. ..
T Consensus        14 il~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M------~rv~k~Lheqg--v~~~~ik~~~r~-iP   84 (256)
T KOG3120|consen   14 ILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELM------DRVFKELHEQG--VRIAEIKQVLRS-IP   84 (256)
T ss_pred             EEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHH------HHHHHHHHHcC--CCHHHHHHHHhc-CC
Confidence            47889999999994333323333322  124444444445565331      13333333223  345667776654 45


Q ss_pred             cchhHHHHHHHHhHCC-CeEEEEcCcHHH-HHHHHHhCCcccccCeEEEc
Q 028576          135 YLDGVEELLHELKQSN-YEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G-~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S  182 (207)
                      ..||+.++++.+++.| |.+.|+|..+.. ++.++++.++.+.|+.|++-
T Consensus        85 ~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTN  134 (256)
T KOG3120|consen   85 IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTN  134 (256)
T ss_pred             CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcC
Confidence            5699999999999999 499999999865 55688999999999988753

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.28  E-value=1.2e-06  Score=75.59  Aligned_cols=67  Identities=7%  Similarity=-0.116  Sum_probs=49.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHHH--HHHHhCCcccccCeEE---EccccCCCCCChHHHHHhhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWYE--IIEDKLKISTYLSWTF---CSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~--~il~~~~l~~yFD~v~---~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++++.++++.|+++|+ ++|+||+.....  ..+...+...+|+.+.   +.+.+...||+|++|+.++...
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~  215 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENF  215 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHh
Confidence            37899999999998887 899999864322  1223456667777554   3455667899999999988654

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.28  E-value=3.7e-07  Score=73.93  Aligned_cols=49  Identities=22%  Similarity=0.377  Sum_probs=35.8

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcC--cHHHHHHHHHhCCcc----------cccCeEEE
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTN--YPIWYEIIEDKLKIS----------TYLSWTFC  181 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN--~~~~~~~il~~~~l~----------~yFD~v~~  181 (207)
                      ..+||++.++|++|+++|++++++|-  .|.+...+++.+++.          ++|+..-+
T Consensus        44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI  104 (169)
T PF12689_consen   44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEI  104 (169)
T ss_dssp             E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEE
T ss_pred             EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhe
Confidence            46899999999999999999999994  477788889999999          88887433

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.21  E-value=2e-05  Score=65.03  Aligned_cols=114  Identities=12%  Similarity=0.054  Sum_probs=72.2

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHH-hc
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMK-KG  132 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~-~~  132 (207)
                      ++-++|.||+|-|++-+.--..+.+..|+..+..  .+    -.+.=.|.++.++-++.....-. +..+++..... +.
T Consensus        14 ~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va--~~----T~rAMng~~~F~eaL~~Rl~llq-p~~~qv~~~v~~~k   86 (227)
T KOG1615|consen   14 RSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVA--EV----TRRAMNGEADFQEALAARLSLLQ-PLQVQVEQFVIKQK   86 (227)
T ss_pred             HhcCeEEEecCcchhHHhhHHHHHHHhCchHHHH--HH----HHHHhCCCCcHHHHHHHHHHHhc-ccHHHHHHHHhcCC
Confidence            4557999999999986322223454555532211  11    11222477887777766554311 22334444333 34


Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHHhCCccc
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIWYEI-IEDKLKIST  174 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~~~~l~~  174 (207)
                      ..+-||+.+++..||++|.+|+++|.+.+.+.. +.+.+|+..
T Consensus        87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~  129 (227)
T KOG1615|consen   87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK  129 (227)
T ss_pred             CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence            577899999999999999999999999865443 667777754

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.19  E-value=2.2e-06  Score=66.52  Aligned_cols=57  Identities=14%  Similarity=0.024  Sum_probs=46.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCc-HHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHH
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNY-PIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERG  197 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~-~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~  197 (207)
                      .++|.+.++|++++.+||-++.+|=. +...-+.++.+++.+||+.+|       .+|+|.-++-
T Consensus        41 ~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~V-------iePhP~K~~M   98 (164)
T COG4996          41 HLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIV-------IEPHPYKFLM   98 (164)
T ss_pred             EEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEE-------ecCCChhHHH
Confidence            68999999999999999999988854 444444678999999999887       5788876653

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.15  E-value=6.2e-06  Score=66.33  Aligned_cols=60  Identities=13%  Similarity=0.078  Sum_probs=46.6

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH-HHH-HHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP-IWY-EIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~-~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|++|+++|++++|+||++ ... +.+.+.+++..+         .+..||+|++|..++...
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~---------~~~~KP~p~~~~~~l~~~  104 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL---------PHAVKPPGCAFRRAHPEM  104 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE---------cCCCCCChHHHHHHHHHc
Confidence            467999999999999999999999987 343 334466665432         245799999999998754

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.14  E-value=5.4e-06  Score=77.94  Aligned_cols=65  Identities=17%  Similarity=-0.011  Sum_probs=55.7

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHH-------------HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPI-------------WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~-------------~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      ++||+.+.|+.|+++||+++|+||.+.             .+..+++.+++.  |+.++++++...+||+|..++.++..
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~  275 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEE  275 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHh
Confidence            679999999999999999999999643             244567888874  99899888889999999999988764

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=98.03  E-value=4.4e-05  Score=66.43  Aligned_cols=76  Identities=14%  Similarity=0.012  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHHHHH-hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeE------EEccccCCC
Q 028576          117 GRPFDLEGLKICMK-KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWT------FCSCVIGMF  188 (207)
Q Consensus       117 g~~~~~~~l~~~~~-~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v------~~S~evg~~  188 (207)
                      +...+.+.++.... ....+.||+.++++.|+++|++++|+|++... +..+++++++.+.+..+      |..+.+-..
T Consensus       103 ~~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG  182 (277)
T TIGR01544       103 QQAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG  182 (277)
T ss_pred             cCCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC
Confidence            44566777777665 46789999999999999999999999999754 66688889987777777      656667777


Q ss_pred             CCCh
Q 028576          189 SKQC  192 (207)
Q Consensus       189 KPdP  192 (207)
                      ||+|
T Consensus       183 ~~~P  186 (277)
T TIGR01544       183 FKGP  186 (277)
T ss_pred             CCCC
Confidence            9999

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.99  E-value=1.4e-05  Score=71.39  Aligned_cols=54  Identities=13%  Similarity=0.019  Sum_probs=45.3

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhC-C-------cccccCeEEEccccCCCCC
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKL-K-------ISTYLSWTFCSCVIGMFSK  190 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~-~-------l~~yFD~v~~S~evg~~KP  190 (207)
                      ....||+.++|+.|+++|++++|+||++.. .+.+++.+ +       +.+|||.|+++.    .||
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a----~KP  245 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDA----RKP  245 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCC----CCC
Confidence            456899999999999999999999999855 44577775 6       899999999665    676

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=97.94  E-value=1.3e-05  Score=70.12  Aligned_cols=54  Identities=15%  Similarity=0.020  Sum_probs=46.7

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCC
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFS  189 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~K  189 (207)
                      -|++.++|++|+++|++++|+||+++ .....++.+++.+|||.++++++.....
T Consensus       150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~  204 (303)
T PHA03398        150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEY  204 (303)
T ss_pred             ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccccc
Confidence            39999999999999999999999964 4556889999999999999998866433

>PLN02645 phosphoglycolate phosphatase

Probab=97.92  E-value=2.6e-05  Score=68.58  Aligned_cols=50  Identities=22%  Similarity=0.225  Sum_probs=40.1

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSCV  184 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~e  184 (207)
                      ++||+.+.|+.|+++|+++.++||.+    ..+...++++|+.-.++.|++|..
T Consensus        45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~   98 (311)
T PLN02645         45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF   98 (311)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH
Confidence            45899999999999999999999965    223334477899888899998864

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.86  E-value=1.8e-05  Score=66.79  Aligned_cols=53  Identities=15%  Similarity=0.068  Sum_probs=45.2

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHH-H--HHHHhCCccc-ccCeEEEccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWY-E--IIEDKLKIST-YLSWTFCSCVIG  186 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~-~--~il~~~~l~~-yFD~v~~S~evg  186 (207)
                      .++||+.++|++|+++|++++++||+++.. +  ..++++|+.. +||.|++|.++.
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~   80 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA   80 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH
Confidence            578999999999999999999999986432 2  4668999987 999999998754

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.83  E-value=3.7e-05  Score=67.93  Aligned_cols=118  Identities=11%  Similarity=-0.002  Sum_probs=62.6

Q ss_pred             eEEEEcCCcccCC-ChhchHHHHHcCCHHHHHHh---hCch-HHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHHHHh
Q 028576           58 ILLFDIMDTIVRD-PFYHDVPAFFGMSMKELIEC---KHPN-AWIEFEMGMISEMELARKFFTD-GRPFDLEGLKICMKK  131 (207)
Q Consensus        58 ~IlFDLDGTLvD~-~~~~~l~~~~g~~~~~~~~~---~~~~-~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~~~~  131 (207)
                      +++||+||||++. .......+++    +.+...   ++.. .+. ...+-.+..+..+.+++. |.+.+.+++....  
T Consensus         2 ~~ifD~DGvL~~g~~~i~ga~eal----~~L~~~~~~~g~~~~fl-TNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~--   74 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKPIAGASDAL----RRLNRNQGQLKIPYIFL-TNGGGFSERARAEEISSLLGVDVSPLQVIQSH--   74 (321)
T ss_pred             EEEEeCcCceECCccccHHHHHHH----HHHhccccccCCCEEEE-ecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh--
Confidence            6899999999993 2233333333    222111   0111 010 011224555666666444 6666655432221  


Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHH
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                           ..+..+++..+  +..++|.|++.   ...++..|    |+.+++++++...||+|++|.
T Consensus        75 -----~~~~~ll~~~~--~~v~viG~~~~---~~~l~~~G----~~~vv~~~~~~~~~p~~~~~~  125 (321)
T TIGR01456        75 -----SPYKSLVNKYE--KRILAVGTGSV---RGVAEGYG----FQNVVHQDEIVRYFRDIDPFS  125 (321)
T ss_pred             -----HHHHHHHHHcC--CceEEEeChHH---HHHHHHcC----CcccccHHHHHhcCCCCCccc
Confidence                 24556665442  23345666553   23334566    777888888999999988763

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=97.82  E-value=1.2e-05  Score=64.34  Aligned_cols=38  Identities=26%  Similarity=0.330  Sum_probs=30.4

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST  174 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~  174 (207)
                      |++.++|++++++|++++|+|.++.. ...+.+.+++..
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~  130 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD  130 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence            44449999999999999999999865 444667778754

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.80  E-value=4.1e-05  Score=66.37  Aligned_cols=53  Identities=15%  Similarity=-0.009  Sum_probs=41.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH----HHHHHHHh-CCcccccCeEEEccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI----WYEIIEDK-LKISTYLSWTFCSCVIG  186 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~----~~~~il~~-~~l~~yFD~v~~S~evg  186 (207)
                      .++||+.+.|++|+++|.++..+||.+.    .....++. .+++.-.|.|++|.+.-
T Consensus        24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at   81 (269)
T COG0647          24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDAT   81 (269)
T ss_pred             ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHH
Confidence            3679999999999999999999999752    23333455 67767789999997653

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.73  E-value=0.00019  Score=60.88  Aligned_cols=55  Identities=4%  Similarity=-0.162  Sum_probs=40.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHH----HHHHHhCCcccccCeEEEccccCCCC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWY----EIIEDKLKISTYLSWTFCSCVIGMFS  189 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~----~~il~~~~l~~yFD~v~~S~evg~~K  189 (207)
                      ..+|++.++++.|+++|++|.++||-+...    ...+...|+..+ ++++.-..-...|
T Consensus       120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~  178 (229)
T TIGR01675       120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNK  178 (229)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCc
Confidence            467999999999999999999999976322    234567787654 7777765333444

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.70  E-value=0.00013  Score=59.54  Aligned_cols=28  Identities=25%  Similarity=0.364  Sum_probs=21.7

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcH
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYP  160 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~  160 (207)
                      ..++||+.|+|++|++.|+.+.++|..+
T Consensus        72 l~p~~gA~e~l~~L~~~g~~~~~Itar~   99 (191)
T PF06941_consen   72 LPPIPGAVEALKKLRDKGHEIVIITARP   99 (191)
T ss_dssp             --B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred             CCccHHHHHHHHHHHHcCCcEEEEEecC
Confidence            4689999999999999998888888764

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=97.62  E-value=0.00019  Score=61.16  Aligned_cols=49  Identities=18%  Similarity=0.222  Sum_probs=36.5

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEccc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSCV  184 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~e  184 (207)
                      +|++.++|++|+++|+++.++||..    ..+...++.+|+....|.|++|..
T Consensus        19 i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~   71 (249)
T TIGR01457        19 IPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASM   71 (249)
T ss_pred             CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHH
Confidence            4678888999999999999999832    334445677888766778888753

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=97.58  E-value=0.00011  Score=59.34  Aligned_cols=51  Identities=14%  Similarity=0.028  Sum_probs=41.8

Q ss_pred             HHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          143 LHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       143 L~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ++.|+++|++++|+||++.. ....++++++..+|+.+         ||+|+.|+.++...
T Consensus        43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------kpkp~~~~~~~~~l   94 (169)
T TIGR02726        43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------KKKTEPYAQMLEEM   94 (169)
T ss_pred             HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------CCCHHHHHHHHHHc
Confidence            56678899999999999754 55578999999888742         89999999988754

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=97.53  E-value=0.00024  Score=57.51  Aligned_cols=64  Identities=19%  Similarity=0.087  Sum_probs=50.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++|++.++|++|+++|++++++|+-+. ....+.+.+|+   ++.++.+...  .||+|.+|..++...
T Consensus       127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi---~~~~v~a~~~--~kP~~k~~~~~i~~l  191 (215)
T PF00702_consen  127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGI---FDSIVFARVI--GKPEPKIFLRIIKEL  191 (215)
T ss_dssp             EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTS---CSEEEEESHE--TTTHHHHHHHHHHHH
T ss_pred             cchhhhhhhhhhhhccCcceeeeecccccccccccccccc---cccccccccc--ccccchhHHHHHHHH
Confidence            4679999999999999999999998754 45556788888   5555555544  899999888877653

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.45  E-value=0.00021  Score=56.50  Aligned_cols=51  Identities=16%  Similarity=-0.042  Sum_probs=42.3

Q ss_pred             HHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      +|++|+++|++++|+||++. ..+.+++++++..+|+.         .||+|+.++.++..
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~---------~~~k~~~~~~~~~~   87 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG---------QSNKLIAFSDILEK   87 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec---------ccchHHHHHHHHHH
Confidence            78999999999999999974 45567899999888763         37899999988764

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.38  E-value=0.00013  Score=61.72  Aligned_cols=51  Identities=14%  Similarity=-0.018  Sum_probs=36.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH----HHHHHHhCCcccccCeEEEcccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW----YEIIEDKLKISTYLSWTFCSCVI  185 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~----~~~il~~~~l~~yFD~v~~S~ev  185 (207)
                      ..+||+.++++.++++|++|.++||-++.    ...-|.+.|+. ..|.++...+-
T Consensus       115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~-~~~~l~lr~~~  169 (229)
T PF03767_consen  115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFP-GWDHLILRPDK  169 (229)
T ss_dssp             EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTS-TBSCGEEEEES
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCC-ccchhcccccc
Confidence            47899999999999999999999997532    22245667764 34666554433

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PTZ00445 p36-lilke protein; Provisional

Probab=97.38  E-value=0.00051  Score=57.56  Aligned_cols=66  Identities=17%  Similarity=0.041  Sum_probs=45.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCcccccCeEEEcc-----------ccCC
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKISTYLSWTFCSC-----------VIGM  187 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~yFD~v~~S~-----------evg~  187 (207)
                      +-|...+++.+|++.|++|.|+|=+..                -++..+++.+...-.+.+++-+           .+|.
T Consensus        76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl  155 (219)
T PTZ00445         76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL  155 (219)
T ss_pred             CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence            446788889999999999999997643                2333556555544445555332           2599


Q ss_pred             CCCChHH--H--HHhhh
Q 028576          188 FSKQCLK--E--RGNLI  200 (207)
Q Consensus       188 ~KPdPei--y--~~~~~  200 (207)
                      .||+|++  |  +..+.
T Consensus       156 ~KPdp~iK~yHle~ll~  172 (219)
T PTZ00445        156 DAPMPLDKSYHLKQVCS  172 (219)
T ss_pred             cCCCccchHHHHHHHHH
Confidence            9999999  9  66554

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.38  E-value=0.0017  Score=56.39  Aligned_cols=50  Identities=8%  Similarity=-0.120  Sum_probs=37.1

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHH----HHHHhCCcccccCeEEEccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYE----IIEDKLKISTYLSWTFCSCV  184 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~----~il~~~~l~~yFD~v~~S~e  184 (207)
                      ..+||+.++.+.|+++|++|.++||-.+...    +-|.+.|+.. .++++.-..
T Consensus       145 pAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~-~~~LiLR~~  198 (275)
T TIGR01680       145 PALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT-WEKLILKDP  198 (275)
T ss_pred             CCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC-cceeeecCC
Confidence            4679999999999999999999999753221    2356677754 377776644

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.32  E-value=0.0007  Score=58.10  Aligned_cols=41  Identities=15%  Similarity=0.182  Sum_probs=32.1

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccC
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLS  177 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD  177 (207)
                      +++.++|+.|+++|++++++||.+ .....+++.+++..+|-
T Consensus        24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i   65 (273)
T PRK00192         24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFI   65 (273)
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEE
Confidence            456778899999999999999986 45566678888876653

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.32  E-value=0.001  Score=56.58  Aligned_cols=16  Identities=13%  Similarity=0.308  Sum_probs=14.1

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      |+++.|+|||||||++
T Consensus         1 m~~kli~~DlDGTLl~   16 (270)
T PRK10513          1 MAIKLIAIDMDGTLLL   16 (270)
T ss_pred             CceEEEEEecCCcCcC
Confidence            4578999999999998

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=97.31  E-value=0.0063  Score=50.08  Aligned_cols=97  Identities=15%  Similarity=0.075  Sum_probs=66.8

Q ss_pred             CeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCcc
Q 028576           57 PILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYL  136 (207)
Q Consensus        57 ~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~~  136 (207)
                      ..|+=|+|||+.-.+...-+...+|.+...       .+.++.-.+.+|..+.+-+++.. .+.+.++.-+.+......-
T Consensus         4 ~vi~sDFDGTITl~Ds~~~itdtf~~~e~k-------~l~~~vls~tiS~rd~~g~mf~~-i~~s~~Eile~llk~i~Id   75 (220)
T COG4359           4 PVIFSDFDGTITLNDSNDYITDTFGPGEWK-------ALKDGVLSKTISFRDGFGRMFGS-IHSSLEEILEFLLKDIKID   75 (220)
T ss_pred             eEEEecCCCceEecchhHHHHhccCchHHH-------HHHHHHhhCceeHHHHHHHHHHh-cCCCHHHHHHHHHhhcccC
Confidence            467789999987544444454445543211       12333345778877877777765 2233466666666667888


Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcHH
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYPI  161 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~~  161 (207)
                      ||..+.+++.++++.++.++|++-.
T Consensus        76 p~fKef~e~ike~di~fiVvSsGm~  100 (220)
T COG4359          76 PGFKEFVEWIKEHDIPFIVVSSGMD  100 (220)
T ss_pred             ccHHHHHHHHHHcCCCEEEEeCCCc
Confidence            9999999999999999999999853

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.23  E-value=0.00098  Score=55.13  Aligned_cols=17  Identities=29%  Similarity=0.354  Sum_probs=14.4

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      |.++.|+|||||||++.
T Consensus         1 m~~kli~~DlDGTLl~~   17 (230)
T PRK01158          1 MKIKAIAIDIDGTITDK   17 (230)
T ss_pred             CceeEEEEecCCCcCCC
Confidence            35689999999999983

>PRK10444 UMP phosphatase; Provisional

Probab=97.20  E-value=0.00022  Score=60.96  Aligned_cols=26  Identities=8%  Similarity=-0.285  Sum_probs=19.2

Q ss_pred             CeEEEccccCCCCCChHHHHHhhhhh
Q 028576          177 SWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       177 D~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +.+.+.+.+...||+|++|+.++...
T Consensus       162 ~~~~g~~~~~~gKP~~~~~~~~~~~~  187 (248)
T PRK10444        162 EKISGRKPFYVGKPSPWIIRAALNKM  187 (248)
T ss_pred             HHHhCCCccccCCCCHHHHHHHHHHc
Confidence            34455555667899999999998754

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.18  E-value=0.00011  Score=62.06  Aligned_cols=66  Identities=14%  Similarity=-0.090  Sum_probs=51.5

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHhCCcccccCeE--EEccccCCCCCChHHHHHhhhhh
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDKLKISTYLSWT--FCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~~~l~~yFD~v--~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ++++.++++.|+++|+++ |+||+...+. ......+...+|..+  .+.+.+...||+|++|+.++...
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~  208 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKEC  208 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHc
Confidence            689999999999899997 9999875433 234566777777755  56666678999999999998654

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.18  E-value=0.00066  Score=50.17  Aligned_cols=52  Identities=21%  Similarity=0.114  Sum_probs=39.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEcccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSCVI  185 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~ev  185 (207)
                      .++||+.++|++|+++|.++.++||.+    ..+...++.+|+.---|.|++|.+.
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~   69 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMA   69 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHH
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHH
Confidence            578999999999999999999999974    3455556888987666889888653

...

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.05  E-value=0.0021  Score=54.41  Aligned_cols=17  Identities=12%  Similarity=0.296  Sum_probs=14.7

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      |+++.|+||+||||++.
T Consensus         1 M~~kli~~DlDGTLl~~   17 (272)
T PRK10530          1 MTYRVIALDLDGTLLTP   17 (272)
T ss_pred             CCccEEEEeCCCceECC
Confidence            45789999999999983

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.97  E-value=0.0026  Score=52.42  Aligned_cols=14  Identities=21%  Similarity=0.432  Sum_probs=12.5

Q ss_pred             CCeEEEEcCCcccC
Q 028576           56 LPILLFDIMDTIVR   69 (207)
Q Consensus        56 ~~~IlFDLDGTLvD   69 (207)
                      ++.|+|||||||++
T Consensus         1 ik~v~~DlDGTLl~   14 (215)
T TIGR01487         1 IKLVAIDIDGTLTE   14 (215)
T ss_pred             CcEEEEecCCCcCC
Confidence            46899999999997

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=96.93  E-value=0.00084  Score=53.65  Aligned_cols=64  Identities=19%  Similarity=0.095  Sum_probs=51.6

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc-ccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST-YLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~-yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      ...||+.++|++|++. |.++|.|++++. ++.+++.++... +|+.++++++....||.   |..+|..
T Consensus        42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~  107 (162)
T TIGR02251        42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK---YVKDLSL  107 (162)
T ss_pred             EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC---EEeEchh
Confidence            4569999999999987 999999999855 455788888765 89999999988877776   5555543

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=96.88  E-value=0.0018  Score=51.63  Aligned_cols=53  Identities=21%  Similarity=0.205  Sum_probs=42.3

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcc-ccc-CeEEEccccC
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIS-TYL-SWTFCSCVIG  186 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~-~yF-D~v~~S~evg  186 (207)
                      ..++||+.++|++|++. |+++|.||++.. +..+++.++.. .+| +.+++.++.+
T Consensus        57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~  112 (156)
T TIGR02250        57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG  112 (156)
T ss_pred             EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC
Confidence            35789999999999965 999999999865 44578899887 589 6677766643

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.72  E-value=0.0052  Score=54.05  Aligned_cols=37  Identities=11%  Similarity=0.156  Sum_probs=22.7

Q ss_pred             HHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccc
Q 028576          139 VEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTY  175 (207)
Q Consensus       139 v~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~y  175 (207)
                      +.+.|++|+++|+.+.++|++. .+...+++.+++..+
T Consensus        23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p   60 (302)
T PRK12702         23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP   60 (302)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence            4455666777777777777765 334445566666543

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.66  E-value=0.0076  Score=51.11  Aligned_cols=16  Identities=25%  Similarity=0.482  Sum_probs=14.1

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      |.++.|+||+||||++
T Consensus         1 ~~~kli~~DlDGTLl~   16 (264)
T COG0561           1 MMIKLLAFDLDGTLLD   16 (264)
T ss_pred             CCeeEEEEcCCCCccC
Confidence            4578999999999998

>PRK10976 putative hydrolase; Provisional

Probab=96.66  E-value=0.0059  Score=51.80  Aligned_cols=15  Identities=13%  Similarity=0.257  Sum_probs=13.4

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      +|.|+|||||||++.
T Consensus         2 ikli~~DlDGTLl~~   16 (266)
T PRK10976          2 YQVVASDLDGTLLSP   16 (266)
T ss_pred             ceEEEEeCCCCCcCC
Confidence            579999999999984

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=96.64  E-value=0.0065  Score=51.82  Aligned_cols=15  Identities=20%  Similarity=0.319  Sum_probs=13.3

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      ++.|+|||||||++.
T Consensus         2 ~kli~~DlDGTLl~~   16 (272)
T PRK15126          2 ARLAAFDMDGTLLMP   16 (272)
T ss_pred             ccEEEEeCCCcCcCC
Confidence            579999999999983

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.58  E-value=0.01  Score=50.83  Aligned_cols=35  Identities=9%  Similarity=0.098  Sum_probs=21.7

Q ss_pred             HHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          139 VEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       139 v~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      ..+.|++|+++|+++.++|..+ .....+.+.+++.
T Consensus        29 ~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         29 AAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            3445666777777777777765 3444455666653

>PLN02887 hydrolase family protein

Probab=96.53  E-value=0.0096  Score=56.92  Aligned_cols=36  Identities=11%  Similarity=-0.068  Sum_probs=24.5

Q ss_pred             hHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          138 GVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       138 gv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      ...+.|++|+++|++++|+|.-+ .....+++.+++.
T Consensus       329 ~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~  365 (580)
T PLN02887        329 TNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA  365 (580)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence            34556778888888888888865 3444555666653

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.43  E-value=0.015  Score=47.62  Aligned_cols=66  Identities=14%  Similarity=0.023  Sum_probs=48.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH---------HH-------HHHHHHhCCcccccCeEEEccc-----cCCCCCCh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP---------IW-------YEIIEDKLKISTYLSWTFCSCV-----IGMFSKQC  192 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~---------~~-------~~~il~~~~l~~yFD~v~~S~e-----vg~~KPdP  192 (207)
                      .+.||+.+.|..|++.||++.++||..         ..       ....++..|.  .||.++.--.     ...+||.|
T Consensus        31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~  108 (181)
T COG0241          31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKP  108 (181)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCCh
Confidence            467899999999999999999999931         11       2223445554  5777766443     35689999


Q ss_pred             HHHHHhhhh
Q 028576          193 LKERGNLIL  201 (207)
Q Consensus       193 eiy~~~~~~  201 (207)
                      ..++.++.-
T Consensus       109 gm~~~~~~~  117 (181)
T COG0241         109 GMLLSALKE  117 (181)
T ss_pred             HHHHHHHHH
Confidence            999998864

>smart00775 LNS2 LNS2 domain

Probab=96.43  E-value=0.0039  Score=49.66  Aligned_cols=26  Identities=27%  Similarity=0.560  Sum_probs=23.4

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHH
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPI  161 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~  161 (207)
                      .|++.++++.|+++||++.++|.-+.
T Consensus        29 ~~~~~~a~~~l~~~G~~ivy~TGRp~   54 (157)
T smart00775       29 HPGVAKLYRDIQNNGYKILYLTARPI   54 (157)
T ss_pred             CHHHHHHHHHHHHcCCeEEEEcCCcH
Confidence            48999999999999999999999874

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=96.33  E-value=0.033  Score=45.94  Aligned_cols=64  Identities=9%  Similarity=0.062  Sum_probs=44.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHH-H---HhCCcccccCeEEEccccCCCCCChHHHHHhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEII-E---DKLKISTYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~i-l---~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                      .+||++.+.|++-++.|.+++|-|++....|.+ .   ..-++..||++.|=- ..| .|-+...|..-+
T Consensus       103 hlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG-~KrE~~SY~kIa  170 (229)
T COG4229         103 HLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG-KKRESQSYAKIA  170 (229)
T ss_pred             ccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc-ccccchhHHHHH
Confidence            579999999999999999999999998666653 2   223566667666533 233 455555555443

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=96.32  E-value=0.0091  Score=47.65  Aligned_cols=64  Identities=22%  Similarity=0.086  Sum_probs=45.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH---H--------H----HHHHHHhCCcccccCeEEEcccc-CCCCCChHHHHHh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP---I--------W----YEIIEDKLKISTYLSWTFCSCVI-GMFSKQCLKERGN  198 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~---~--------~----~~~il~~~~l~~yFD~v~~S~ev-g~~KPdPeiy~~~  198 (207)
                      ..|++.+.|++|++.||++.|+||..   .        .    ++.+++.+++.   -.++++++. ..+||.|..++.+
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip---~~~~~a~~~d~~RKP~~GM~~~~  106 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP---IQVYAAPHKDPCRKPNPGMWEFA  106 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS----EEEEECGCSSTTSTTSSHHHHHH
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc---eEEEecCCCCCCCCCchhHHHHH
Confidence            34689999999999999999999951   1        1    22245666653   345666554 6899999999987


Q ss_pred             hhh
Q 028576          199 LIL  201 (207)
Q Consensus       199 ~~~  201 (207)
                      +..
T Consensus       107 ~~~  109 (159)
T PF08645_consen  107 LKD  109 (159)
T ss_dssp             CCC
T ss_pred             HHh
Confidence            754

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=95.96  E-value=0.024  Score=45.88  Aligned_cols=60  Identities=15%  Similarity=0.078  Sum_probs=46.6

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhhc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFI  204 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~~  204 (207)
                      -|.+.+++.++++.|.++.|+||..+ ......+++++    +++     .+..||-+..|+.||...-+
T Consensus        48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi-----~~A~KP~~~~fr~Al~~m~l  108 (175)
T COG2179          48 TPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFI-----YRAKKPFGRAFRRALKEMNL  108 (175)
T ss_pred             CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----cee-----ecccCccHHHHHHHHHHcCC
Confidence            36888999999999999999999764 45556567775    333     35699999999999976543

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=95.64  E-value=0.034  Score=53.96  Aligned_cols=26  Identities=15%  Similarity=0.049  Sum_probs=19.9

Q ss_pred             hhhhccccccccCCCCCeEEEEcCCcccCC
Q 028576           41 VAMASLSGKENEKRKLPILLFDIMDTIVRD   70 (207)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~IlFDLDGTLvD~   70 (207)
                      +.|...+    ..|+.+.|++|+||||+|.
T Consensus       405 ~~~~~~~----~~~~~KLIfsDLDGTLLd~  430 (694)
T PRK14502        405 RPSRLPS----SGQFKKIVYTDLDGTLLNP  430 (694)
T ss_pred             hcccCCC----cCceeeEEEEECcCCCcCC
Confidence            5555555    3377789999999999983

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=95.53  E-value=0.017  Score=54.68  Aligned_cols=46  Identities=15%  Similarity=0.093  Sum_probs=39.5

Q ss_pred             CcchhHHHHHHHHhHCC-CeEEEEcCcHHH-HHHHHHhCCcccccCeE
Q 028576          134 AYLDGVEELLHELKQSN-YEMHAFTNYPIW-YEIIEDKLKISTYLSWT  179 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G-~kl~IlTN~~~~-~~~il~~~~l~~yFD~v  179 (207)
                      .++||+.++|++|+++| ++++++||.+.. .+.+.+++|+.++|..+
T Consensus       384 ~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~  431 (556)
T TIGR01525       384 QLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL  431 (556)
T ss_pred             cchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccC
Confidence            46899999999999999 999999998755 55678999998887654

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=95.18  E-value=0.05  Score=44.06  Aligned_cols=52  Identities=17%  Similarity=-0.005  Sum_probs=39.3

Q ss_pred             HHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++.|+++|++++|+||.+. ....+++.+++..+|+.         .+|.|+.++.++...
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g---------~~~k~~~l~~~~~~~  108 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG---------QSNKLIAFSDLLEKL  108 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC---------CCcHHHHHHHHHHHh
Confidence            45677889999999999874 45557788998877752         356678888887643

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=95.17  E-value=0.057  Score=39.74  Aligned_cols=85  Identities=18%  Similarity=0.137  Sum_probs=38.3

Q ss_pred             EEEEcCCcccCC--ChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCcc
Q 028576           59 LLFDIMDTIVRD--PFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYL  136 (207)
Q Consensus        59 IlFDLDGTLvD~--~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~~  136 (207)
                      ++||+||||++.  ++..+ .+++    +.+.+. +...+.--..+.-+.+++.+++...|.+.+.+          +.+
T Consensus         1 ~l~D~dGvl~~g~~~ipga-~e~l----~~L~~~-g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~----------~i~   64 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEPIPGA-VEAL----DALRER-GKPVVFLTNNSSRSREEYAKKLKKLGIPVDED----------EII   64 (101)
T ss_dssp             EEEESTTTSEETTEE-TTH-HHHH----HHHHHT-TSEEEEEES-SSS-HHHHHHHHHHTTTT--GG----------GEE
T ss_pred             CEEeCccEeEeCCCcCcCH-HHHH----HHHHHc-CCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcC----------EEE
Confidence            689999999982  22222 2222    222211 11111001113345567777775546554322          233


Q ss_pred             hhHHHHHHHHhH--CCCeEEEEcCc
Q 028576          137 DGVEELLHELKQ--SNYEMHAFTNY  159 (207)
Q Consensus       137 pgv~elL~~Lk~--~G~kl~IlTN~  159 (207)
                      .....+.++|++  .+-+++++-+.
T Consensus        65 ts~~~~~~~l~~~~~~~~v~vlG~~   89 (101)
T PF13344_consen   65 TSGMAAAEYLKEHKGGKKVYVLGSD   89 (101)
T ss_dssp             EHHHHHHHHHHHHTTSSEEEEES-H
T ss_pred             ChHHHHHHHHHhcCCCCEEEEEcCH
Confidence            333334444544  46778777665

...

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=95.09  E-value=0.029  Score=53.02  Aligned_cols=46  Identities=17%  Similarity=0.038  Sum_probs=39.3

Q ss_pred             CcchhHHHHHHHHhHCCC-eEEEEcCcHHH-HHHHHHhCCcccccCeE
Q 028576          134 AYLDGVEELLHELKQSNY-EMHAFTNYPIW-YEIIEDKLKISTYLSWT  179 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~-kl~IlTN~~~~-~~~il~~~~l~~yFD~v  179 (207)
                      .++||+.++|++|+++|+ +++++||.+.. .+.+.+++|+.++|..+
T Consensus       362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~  409 (536)
T TIGR01512       362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAEL  409 (536)
T ss_pred             cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhcc
Confidence            568999999999999999 99999998754 55678999998887643

.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=94.86  E-value=0.041  Score=51.10  Aligned_cols=51  Identities=12%  Similarity=0.110  Sum_probs=34.5

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHh---C------CcccccCeEEEccccCCCCC
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDK---L------KISTYLSWTFCSCVIGMFSK  190 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~---~------~l~~yFD~v~~S~evg~~KP  190 (207)
                      -|.+..+|+.||+.|.++.++||++-++. .+++.   -      ...+|||.||++    ..||
T Consensus       185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~----A~KP  245 (448)
T PF05761_consen  185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVD----ARKP  245 (448)
T ss_dssp             -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES------CC
T ss_pred             CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEc----CCCC
Confidence            47889999999999999999999974433 33332   2      578899999955    4786

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=94.78  E-value=0.045  Score=47.18  Aligned_cols=51  Identities=22%  Similarity=0.229  Sum_probs=39.7

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEcccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSCVI  185 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~ev  185 (207)
                      ++||+.++|++|+++|++++++||.+    ..+...++.+|+..-.+.+++|...
T Consensus        19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~   73 (279)
T TIGR01452        19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALC   73 (279)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHH
Confidence            56899999999999999999999953    2333445778887667888887654

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=94.78  E-value=0.33  Score=45.58  Aligned_cols=114  Identities=13%  Similarity=0.129  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCcccC--CChhchHH-HHHcCCHHHH--HHhhCchHHHHHHhCCCCHHHHHH---HHhhcCCCC-CHHH
Q 028576           54 RKLPILLFDIMDTIVR--DPFYHDVP-AFFGMSMKEL--IECKHPNAWIEFEMGMISEMELAR---KFFTDGRPF-DLEG  124 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD--~~~~~~l~-~~~g~~~~~~--~~~~~~~~w~~~e~G~Is~~e~~~---~~~~~g~~~-~~~~  124 (207)
                      +..++++||+||||+.  +.|-+=+. ++...+.-.+  .-...+-.|.-..-| .+......   ..+. |... +.+.
T Consensus         6 ~~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~~LL~l~P~l~ll~~~~-~~~~~lK~mi~v~f~-Gl~~~die~   83 (498)
T PLN02499          6 TTSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFALLLFLWPIIRLLDMLG-MGDAALKLMIFVATA-GVHESEIES   83 (498)
T ss_pred             cccceEEEecccceecCCCccHHHHHHHHHhccHHHHHHHHHHhHHHHHHHhcC-CchHHHHHHHHHHhC-CCCHHHHHH
Confidence            4556899999999997  33433322 1221121111  112335555422213 22222222   2221 4332 2333


Q ss_pred             HHHHHHhcC---CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHh-CCcc
Q 028576          125 LKICMKKGY---AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDK-LKIS  173 (207)
Q Consensus       125 l~~~~~~~~---~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~-~~l~  173 (207)
                      ..+++....   .+-+.   ..+..++.| +++++|-.|+. .+..++. +|.+
T Consensus        84 vaRavlpkf~~~dv~~e---~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D  133 (498)
T PLN02499         84 VARAVLPKFYMDDVDME---AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD  133 (498)
T ss_pred             HHHHHhhHHHHhhCCHH---HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence            333332211   11223   445667788 99999998854 4444443 6654

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=94.69  E-value=0.3  Score=46.01  Aligned_cols=35  Identities=11%  Similarity=-0.025  Sum_probs=21.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHH-HHHHHh-CCcc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWY-EIIEDK-LKIS  173 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~-~~il~~-~~l~  173 (207)
                      +.+.+.+.   +++.|.. .|+|-+++.+ +.+.+. +|++
T Consensus       111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid  147 (497)
T PLN02177        111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGAD  147 (497)
T ss_pred             cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCC
Confidence            44555554   4567765 8999888654 445433 5654

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=94.37  E-value=0.059  Score=46.04  Aligned_cols=50  Identities=14%  Similarity=0.072  Sum_probs=38.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSCV  184 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~e  184 (207)
                      ++||+.+.|++|+++|+++.++||.+    ..+...++.+|+.---|.|++|..
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~   75 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAP   75 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHH
Confidence            67899999999999999999999964    234445677887644567777743

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PTZ00174 phosphomannomutase; Provisional

Probab=94.03  E-value=0.029  Score=47.46  Aligned_cols=17  Identities=41%  Similarity=0.602  Sum_probs=15.4

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      |+++.|+|||||||+++
T Consensus         3 ~~~klia~DlDGTLL~~   19 (247)
T PTZ00174          3 MKKTILLFDVDGTLTKP   19 (247)
T ss_pred             CCCeEEEEECcCCCcCC
Confidence            77899999999999983

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=94.00  E-value=0.083  Score=45.29  Aligned_cols=44  Identities=11%  Similarity=0.011  Sum_probs=33.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHH-----HHHHHhCCcccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWY-----EIIEDKLKISTYLS  177 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~-----~~il~~~~l~~yFD  177 (207)
                      .+.||+.|+|.+.-++|.+|.-+||-...-     ..-+...|+...-+
T Consensus       122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~  170 (274)
T COG2503         122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE  170 (274)
T ss_pred             ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc
Confidence            578999999999999999999999975322     12346667765554

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=93.71  E-value=0.25  Score=42.43  Aligned_cols=37  Identities=19%  Similarity=0.211  Sum_probs=27.9

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHH----HHHHHHHhCCc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPI----WYEIIEDKLKI  172 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~----~~~~il~~~~l  172 (207)
                      -+.+.+++..|+++|+++..+|..+.    |..+.+..+|+
T Consensus        83 e~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi  123 (252)
T PF11019_consen   83 ESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGI  123 (252)
T ss_pred             chhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCC
Confidence            37888999999999999999999642    33344566665

The function is not known.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=93.53  E-value=0.079  Score=50.43  Aligned_cols=40  Identities=18%  Similarity=0.165  Sum_probs=34.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIS  173 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~  173 (207)
                      .++||+.+++++|+++|++++++||.+.. .+.+.+++|+.
T Consensus       405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~  445 (562)
T TIGR01511       405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN  445 (562)
T ss_pred             cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence            46899999999999999999999998754 55577889984

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=93.46  E-value=0.035  Score=44.96  Aligned_cols=17  Identities=12%  Similarity=0.327  Sum_probs=15.0

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      +.++.|+||+||||+|.
T Consensus        19 ~~ikli~~D~Dgtl~~~   35 (183)
T PRK09484         19 ENIRLLICDVDGVFSDG   35 (183)
T ss_pred             hCceEEEEcCCeeeecC
Confidence            46899999999999973

>PLN02423 phosphomannomutase

Probab=92.99  E-value=0.056  Score=45.90  Aligned_cols=17  Identities=29%  Similarity=0.483  Sum_probs=14.5

Q ss_pred             CCCCeEE-EEcCCcccCC
Q 028576           54 RKLPILL-FDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~Il-FDLDGTLvD~   70 (207)
                      +|++.|+ ||+||||+++
T Consensus         4 ~~~~~i~~~D~DGTLl~~   21 (245)
T PLN02423          4 RKPGVIALFDVDGTLTAP   21 (245)
T ss_pred             CccceEEEEeccCCCcCC
Confidence            6778777 9999999983

>PRK10444 UMP phosphatase; Provisional

Probab=92.98  E-value=0.13  Score=43.80  Aligned_cols=49  Identities=20%  Similarity=0.200  Sum_probs=36.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHH----HHHHHHHhCCcccccCeEEEcc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPI----WYEIIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~----~~~~il~~~~l~~yFD~v~~S~  183 (207)
                      ++||+.+.+++|+++|.++.++||.+.    .+.+.++.+|+.---|.+++|.
T Consensus        18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~   70 (248)
T PRK10444         18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSA   70 (248)
T ss_pred             eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHH
Confidence            568999999999999999999999742    2334456677754456777774

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=92.53  E-value=0.25  Score=49.55  Aligned_cols=56  Identities=14%  Similarity=0.077  Sum_probs=46.1

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFS  189 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~K  189 (207)
                      .+.||+.+.++.|++.|+++.++|+... ....+.++.|+.++++.++.+.++...+
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~  584 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMD  584 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCC
Confidence            4579999999999999999999999864 4556778999998888887777765443

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=92.25  E-value=0.084  Score=40.74  Aligned_cols=26  Identities=19%  Similarity=0.130  Sum_probs=16.9

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP  160 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~  160 (207)
                      +.+++.+.|++|+++|+.+.++|.-+
T Consensus        25 ~~~~~ie~L~~l~~~G~~IiiaTGR~   50 (126)
T TIGR01689        25 PILAVIEKLRHYKALGFEIVISSSRN   50 (126)
T ss_pred             cCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            44566666677766777777777643

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=92.07  E-value=0.28  Score=42.95  Aligned_cols=60  Identities=15%  Similarity=0.074  Sum_probs=47.4

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEccccCCCCCChHH
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPei  194 (207)
                      ..|.+.+-|.+||+.|.-+.+=|.|. ++....++.+++.+|||.+++...-...-+..++
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~  203 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVI  203 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccce
Confidence            45888999999999999999999987 4566677899999999999887655544444433

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=91.18  E-value=0.1  Score=41.01  Aligned_cols=14  Identities=14%  Similarity=0.498  Sum_probs=12.7

Q ss_pred             CCeEEEEcCCcccC
Q 028576           56 LPILLFDIMDTIVR   69 (207)
Q Consensus        56 ~~~IlFDLDGTLvD   69 (207)
                      +++|+||+||||+|
T Consensus         1 ~~~~~~D~Dgtl~~   14 (154)
T TIGR01670         1 IRLLILDVDGVLTD   14 (154)
T ss_pred             CeEEEEeCceeEEc
Confidence            46899999999999

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=91.17  E-value=0.34  Score=40.76  Aligned_cols=51  Identities=18%  Similarity=0.096  Sum_probs=38.2

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHh-CCcccccCeEEEccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDK-LKISTYLSWTFCSCV  184 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~-~~l~~yFD~v~~S~e  184 (207)
                      .++|++.+.|+.|+++|+++.++||..    ..+...+.. +++.--.|.+++|..
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~   69 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS   69 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH
Confidence            357899999999999999999999964    233333444 777666778888754

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=89.74  E-value=1.5  Score=36.81  Aligned_cols=11  Identities=36%  Similarity=0.510  Sum_probs=10.3

Q ss_pred             EEEEcCCcccC
Q 028576           59 LLFDIMDTIVR   69 (207)
Q Consensus        59 IlFDLDGTLvD   69 (207)
                      ++||+||||++
T Consensus         1 ~lfD~DGvL~~   11 (236)
T TIGR01460         1 FLFDIDGVLWL   11 (236)
T ss_pred             CEEeCcCccCc
Confidence            58999999999

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=89.24  E-value=0.69  Score=35.97  Aligned_cols=39  Identities=13%  Similarity=0.152  Sum_probs=31.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH--HHHHHHHHhCCc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP--IWYEIIEDKLKI  172 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~--~~~~~il~~~~l  172 (207)
                      ..|+++...|..|+++|+++.++||+.  ..++..++.+..
T Consensus        44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkv   84 (144)
T KOG4549|consen   44 IFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKV   84 (144)
T ss_pred             eeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhcc
Confidence            478999999999999999999999984  445556666554

>PRK10671 copA copper exporting ATPase; Provisional

Probab=89.06  E-value=0.51  Score=46.98  Aligned_cols=45  Identities=13%  Similarity=0.118  Sum_probs=37.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCe
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSW  178 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~  178 (207)
                      .++||+.+.|++|+++|++++++|+.+.. .+.+.+++|+.++|..
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~  695 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAG  695 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeC
Confidence            45799999999999999999999998754 5557788999776553

>TIGR01684 viral_ppase viral phosphatase

Probab=88.64  E-value=0.24  Score=43.60  Aligned_cols=17  Identities=24%  Similarity=0.550  Sum_probs=14.5

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      ..++.|+|||||||+++
T Consensus       124 ~~~kvIvFDLDgTLi~~  140 (301)
T TIGR01684       124 EPPHVVVFDLDSTLITD  140 (301)
T ss_pred             ccceEEEEecCCCCcCC
Confidence            45579999999999984

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=88.39  E-value=0.93  Score=35.30  Aligned_cols=52  Identities=23%  Similarity=0.289  Sum_probs=37.9

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCc-ccccCeEEEccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKI-STYLSWTFCSCVIG  186 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l-~~yFD~v~~S~evg  186 (207)
                      ...||+.++|++|.+. |.++|.|++.. ..+.+++.+.- ..+|++++..++..
T Consensus        36 ~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~   89 (159)
T PF03031_consen   36 KLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCT   89 (159)
T ss_dssp             EE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSE
T ss_pred             eeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccccc
Confidence            4569999999999665 99999999874 45556666655 56899998877654

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=88.04  E-value=0.26  Score=39.54  Aligned_cols=15  Identities=20%  Similarity=0.414  Sum_probs=13.0

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      +++|+||.||||.+.
T Consensus         1 i~~i~fDktGTLt~~   15 (215)
T PF00702_consen    1 IDAICFDKTGTLTQG   15 (215)
T ss_dssp             ESEEEEECCTTTBES
T ss_pred             CeEEEEecCCCcccC
Confidence            468999999999983

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=87.98  E-value=0.54  Score=42.53  Aligned_cols=52  Identities=12%  Similarity=0.054  Sum_probs=38.0

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHH---hCCcccccCeEEEccccCCCCCC
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIWYE-IIED---KLKISTYLSWTFCSCVIGMFSKQ  191 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~---~~~l~~yFD~v~~S~evg~~KPd  191 (207)
                      -|....+|+.|++.|.++.++||+|-.+- .-+.   .-...+.||.|+    |...||+
T Consensus       242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVI----vqA~KP~  297 (510)
T KOG2470|consen  242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVI----VQANKPE  297 (510)
T ss_pred             cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeE----EecCCCc
Confidence            46788899999999999999999985433 2122   235677899887    4556664

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=87.79  E-value=0.21  Score=40.83  Aligned_cols=12  Identities=25%  Similarity=0.249  Sum_probs=10.6

Q ss_pred             EEEEcCCcccCC
Q 028576           59 LLFDIMDTIVRD   70 (207)
Q Consensus        59 IlFDLDGTLvD~   70 (207)
                      |+|||||||+|+
T Consensus         1 i~~DlDGTLl~~   12 (225)
T TIGR01482         1 IASDIDGTLTDP   12 (225)
T ss_pred             CeEeccCccCCC
Confidence            589999999983

catalyze the same reaction as SPP.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=87.61  E-value=0.3  Score=39.76  Aligned_cols=11  Identities=18%  Similarity=0.425  Sum_probs=10.4

Q ss_pred             EEEEcCCcccC
Q 028576           59 LLFDIMDTIVR   69 (207)
Q Consensus        59 IlFDLDGTLvD   69 (207)
                      |+||+||||++
T Consensus         1 i~~DlDGTLl~   11 (254)
T PF08282_consen    1 IFSDLDGTLLN   11 (254)
T ss_dssp             EEEECCTTTCS
T ss_pred             cEEEECCceec
Confidence            78999999998

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=87.10  E-value=1.2  Score=36.38  Aligned_cols=36  Identities=14%  Similarity=0.152  Sum_probs=29.1

Q ss_pred             hHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          138 GVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       138 gv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      ...++|+.|+++|++++++||.+ .....+.+.+++.
T Consensus        20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            36788899999999999999987 4455667788875

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=86.93  E-value=2.3  Score=34.66  Aligned_cols=90  Identities=18%  Similarity=0.154  Sum_probs=45.3

Q ss_pred             eEEEEcCCcccCCChh-chHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCcc
Q 028576           58 ILLFDIMDTIVRDPFY-HDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAYL  136 (207)
Q Consensus        58 ~IlFDLDGTLvD~~~~-~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~~  136 (207)
                      -+..|+||||.|.+.. ..+...|    +.....-.+..+.-..-|.|+.+++++-+-..         +........+-
T Consensus         8 ~~ciDIDGtit~~~t~~~~~n~~f----~kslse~d~t~y~lhkil~i~~ee~~k~~e~~---------ea~l~ke~l~~   74 (194)
T COG5663           8 RCCIDIDGTITDDPTFAPYLNPAF----EKSLSEADPTDYDLHKILNITTEEFWKWMEQT---------EAWLYKEALLA   74 (194)
T ss_pred             heeeccCCceecCcccchhccHHH----HhhhhhcccccccHHHHhCccHHHHHHHHHHH---------HHHHHHHHHHH
Confidence            4789999999994322 2222222    22111111111111223556766776543210         00111111234


Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcHH
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYPI  161 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~~  161 (207)
                      .++...|..++++ .+++.+|.-..
T Consensus        75 q~v~~~L~~~~e~-~~L~~itar~~   98 (194)
T COG5663          75 QLVKQVLPSLKEE-HRLIYITARKA   98 (194)
T ss_pred             HHHHHHhHHHHhh-ceeeeeehhhH
Confidence            6777888888876 68888887543

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=86.04  E-value=0.37  Score=40.36  Aligned_cols=12  Identities=17%  Similarity=0.459  Sum_probs=10.9

Q ss_pred             eEEEEcCCcccC
Q 028576           58 ILLFDIMDTIVR   69 (207)
Q Consensus        58 ~IlFDLDGTLvD   69 (207)
                      .|+|||||||++
T Consensus         1 li~~DlDGTLl~   12 (225)
T TIGR02461         1 VIFTDLDGTLLP   12 (225)
T ss_pred             CEEEeCCCCCcC
Confidence            489999999998

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=85.17  E-value=1.5  Score=43.33  Aligned_cols=41  Identities=17%  Similarity=0.080  Sum_probs=34.8

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST  174 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~  174 (207)
                      .+.||+.+.+++|+++|++++++|+.+.. ...+.+++|+..
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~  609 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF  609 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe
Confidence            46799999999999999999999998744 555778999863

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=85.11  E-value=0.41  Score=37.33  Aligned_cols=13  Identities=31%  Similarity=0.526  Sum_probs=10.8

Q ss_pred             CeEEEEcCCcccC
Q 028576           57 PILLFDIMDTIVR   69 (207)
Q Consensus        57 ~~IlFDLDGTLvD   69 (207)
                      ++++|||||||++
T Consensus         1 k~LVlDLD~TLv~   13 (159)
T PF03031_consen    1 KTLVLDLDGTLVH   13 (159)
T ss_dssp             EEEEEE-CTTTEE
T ss_pred             CEEEEeCCCcEEE
Confidence            4799999999998

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>PLN02645 phosphoglycolate phosphatase

Probab=85.11  E-value=0.22  Score=43.67  Aligned_cols=62  Identities=5%  Similarity=-0.230  Sum_probs=42.4

Q ss_pred             HHHHHHHhH-CCCeEEEEcCcHHHH--HHHHHhCCcccccCeEEEccccCC---CCCChHHHHHhhhhh
Q 028576          140 EELLHELKQ-SNYEMHAFTNYPIWY--EIIEDKLKISTYLSWTFCSCVIGM---FSKQCLKERGNLILI  202 (207)
Q Consensus       140 ~elL~~Lk~-~G~kl~IlTN~~~~~--~~il~~~~l~~yFD~v~~S~evg~---~KPdPeiy~~~~~~~  202 (207)
                      ......|+. .| -++|+||....+  ...+...+...+|+.+..+.....   .||+|++|..++...
T Consensus       176 ~~a~~~l~~~~g-~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~  243 (311)
T PLN02645        176 QYATLCIRENPG-CLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKF  243 (311)
T ss_pred             HHHHHHHhcCCC-CEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHc
Confidence            334555654 34 589999987533  223345678788998877766443   599999999998754

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=85.03  E-value=1.8  Score=36.21  Aligned_cols=40  Identities=18%  Similarity=0.169  Sum_probs=32.9

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIST  174 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~  174 (207)
                      ..++..+.|++|+++|+++.++|+.+ .....+++.+++..
T Consensus        16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~   56 (225)
T TIGR02461        16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP   56 (225)
T ss_pred             CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            45789999999999999999999976 55666778888754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=84.87  E-value=0.45  Score=40.00  Aligned_cols=13  Identities=23%  Similarity=0.649  Sum_probs=11.2

Q ss_pred             eEEEEcCCcccCC
Q 028576           58 ILLFDIMDTIVRD   70 (207)
Q Consensus        58 ~IlFDLDGTLvD~   70 (207)
                      .|+|||||||++.
T Consensus         1 li~~DlDGTLl~~   13 (256)
T TIGR00099         1 LIFIDLDGTLLND   13 (256)
T ss_pred             CEEEeCCCCCCCC
Confidence            3789999999983

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK06769 hypothetical protein; Validated

Probab=84.73  E-value=0.62  Score=37.27  Aligned_cols=16  Identities=19%  Similarity=0.206  Sum_probs=13.9

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      ..|++|+||.||||.-
T Consensus         2 ~~~~~~~~d~d~~~~~   17 (173)
T PRK06769          2 TNIQAIFIDRDGTIGG   17 (173)
T ss_pred             CCCcEEEEeCCCcccC
Confidence            4689999999999964

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=84.61  E-value=2.9  Score=33.87  Aligned_cols=40  Identities=18%  Similarity=0.108  Sum_probs=33.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      .+-|...+.|++|+++|++++++|..+ .....+++.+++.
T Consensus        15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen   15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID   55 (254)
T ss_dssp             SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred             eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence            355889999999999999999999976 5566677788875

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=84.41  E-value=0.52  Score=37.99  Aligned_cols=15  Identities=7%  Similarity=0.434  Sum_probs=13.7

Q ss_pred             CCCeEEEEcCCcccC
Q 028576           55 KLPILLFDIMDTIVR   69 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD   69 (207)
                      .+++++||+||||.|
T Consensus         6 ~i~~~v~d~dGv~td   20 (169)
T TIGR02726         6 NIKLVILDVDGVMTD   20 (169)
T ss_pred             cCeEEEEeCceeeEC
Confidence            378999999999999

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=84.26  E-value=1.9  Score=37.97  Aligned_cols=48  Identities=19%  Similarity=0.177  Sum_probs=37.2

Q ss_pred             CCcchhHHHHHHHHhHCC-CeEEEEcCcHHHHHHHHHhCCcccccCeEEEcccc
Q 028576          133 YAYLDGVEELLHELKQSN-YEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVI  185 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G-~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~ev  185 (207)
                      ..++|..-++++.+|+.| .++.|+||+..  ..+++.+.   .+|.++.|=+-
T Consensus        91 PTLy~~L~elI~~~k~~g~~~tflvTNgsl--pdv~~~L~---~~dql~~sLdA  139 (296)
T COG0731          91 PTLYPNLGELIEEIKKRGKKTTFLVTNGSL--PDVLEELK---LPDQLYVSLDA  139 (296)
T ss_pred             cccccCHHHHHHHHHhcCCceEEEEeCCCh--HHHHHHhc---cCCEEEEEecc
Confidence            468899999999999999 79999999965  33444444   57888877543

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=84.24  E-value=0.56  Score=37.30  Aligned_cols=14  Identities=29%  Similarity=0.641  Sum_probs=10.6

Q ss_pred             CeEEEEcCCcccCC
Q 028576           57 PILLFDIMDTIVRD   70 (207)
Q Consensus        57 ~~IlFDLDGTLvD~   70 (207)
                      |.+.||+||||+.+
T Consensus         1 Kia~fD~DgTLi~~   14 (159)
T PF08645_consen    1 KIAFFDLDGTLIKT   14 (159)
T ss_dssp             SEEEE-SCTTTEE-
T ss_pred             CEEEEeCCCCccCC
Confidence            46899999999973

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=82.61  E-value=0.31  Score=41.37  Aligned_cols=65  Identities=6%  Similarity=-0.097  Sum_probs=43.2

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHHHHH---HH-HhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIWYEI---IE-DKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~---il-~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ++.+...+..|+ +|.+ .++||....+..   .. ..-.+...++...+.+.+...||+|++|+.++...
T Consensus       123 y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~  191 (249)
T TIGR01457       123 YEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHL  191 (249)
T ss_pred             HHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHc
Confidence            566667777775 5776 889997432221   11 12234455666667777888999999999998754

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=82.34  E-value=0.74  Score=40.65  Aligned_cols=17  Identities=24%  Similarity=0.540  Sum_probs=14.3

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      ..++.|+|||||||+++
T Consensus       126 ~~~~~i~~D~D~TL~~~  142 (303)
T PHA03398        126 EIPHVIVFDLDSTLITD  142 (303)
T ss_pred             eeccEEEEecCCCccCC
Confidence            44579999999999984

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=81.76  E-value=2.8  Score=35.16  Aligned_cols=39  Identities=18%  Similarity=0.165  Sum_probs=31.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      +-+...+.|++|+++|++++++|+.+ .....+.+.+++.
T Consensus        17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099        17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            45788999999999999999999986 4455566777765

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=81.61  E-value=0.73  Score=37.21  Aligned_cols=13  Identities=31%  Similarity=0.680  Sum_probs=11.1

Q ss_pred             eEEEEcCCcccCC
Q 028576           58 ILLFDIMDTIVRD   70 (207)
Q Consensus        58 ~IlFDLDGTLvD~   70 (207)
                      .|+||+||||++.
T Consensus         1 li~~D~DgTL~~~   13 (204)
T TIGR01484         1 LLFFDLDGTLLDP   13 (204)
T ss_pred             CEEEeCcCCCcCC
Confidence            3789999999973

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=81.41  E-value=4  Score=34.33  Aligned_cols=37  Identities=16%  Similarity=0.200  Sum_probs=29.0

Q ss_pred             hHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCccc
Q 028576          138 GVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIST  174 (207)
Q Consensus       138 gv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~  174 (207)
                      ...+.++.|+++|+++.++|+.+ ..+..+++.+++..
T Consensus        20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~   57 (256)
T TIGR01486        20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED   57 (256)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            46778899999999999999975 55666677888753

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=81.36  E-value=0.79  Score=37.57  Aligned_cols=12  Identities=17%  Similarity=0.360  Sum_probs=10.9

Q ss_pred             EEEEcCCcccCC
Q 028576           59 LLFDIMDTIVRD   70 (207)
Q Consensus        59 IlFDLDGTLvD~   70 (207)
                      |++||||||++.
T Consensus         2 i~~DlDGTLL~~   13 (221)
T TIGR02463         2 VFSDLDGTLLDS   13 (221)
T ss_pred             EEEeCCCCCcCC
Confidence            789999999983

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=80.47  E-value=4.1  Score=35.98  Aligned_cols=53  Identities=11%  Similarity=0.025  Sum_probs=29.9

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH-HH--HHHHHHhCCcccccCeEEEccccCC
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP-IW--YEIIEDKLKISTYLSWTFCSCVIGM  187 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~-~~--~~~il~~~~l~~yFD~v~~S~evg~  187 (207)
                      +..|...+-++|++.|++..-..-.+ ..  ........++++-...|+++.|...
T Consensus       110 yvig~~gi~~eL~~aG~~~~g~~~~~~~~~~~~~~~~~~~~d~~VgAVvvg~D~hf  165 (306)
T KOG2882|consen  110 YVIGEEGIREELDEAGFEYFGGGPDGKDTDGAKSFVLSIGLDPDVGAVVVGYDEHF  165 (306)
T ss_pred             EEecchhhhHHHHHcCceeecCCCCcccccccccchhhcCCCCCCCEEEEeccccc
Confidence            34677788888999997655444332 11  1111123344555667777766544

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=80.25  E-value=0.97  Score=36.39  Aligned_cols=16  Identities=13%  Similarity=0.515  Sum_probs=14.4

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      -+++.+|||+||||.|
T Consensus         6 ~~IkLli~DVDGvLTD   21 (170)
T COG1778           6 KNIKLLILDVDGVLTD   21 (170)
T ss_pred             hhceEEEEeccceeec
Confidence            4678999999999999

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=80.02  E-value=1  Score=36.50  Aligned_cols=18  Identities=17%  Similarity=0.355  Sum_probs=15.6

Q ss_pred             cCCCCCeEEEEcCCcccC
Q 028576           52 EKRKLPILLFDIMDTIVR   69 (207)
Q Consensus        52 ~~~~~~~IlFDLDGTLvD   69 (207)
                      .++.+++|++|||+||+-
T Consensus        24 ~~~Gikgvi~DlDNTLv~   41 (175)
T COG2179          24 KAHGIKGVILDLDNTLVP   41 (175)
T ss_pred             HHcCCcEEEEeccCceec
Confidence            347789999999999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	207
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	2e-20
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	6e-16
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	5e-13
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	2e-07
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	1e-05
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 83.6 bits (207), Expect = 2e-20
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 59  LLFDIMDTIVRDPF----YHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKF- 113
           L +DI   ++ + +      DV   FG+   +  E  H  A  E E+G ++  E   +  
Sbjct: 7   LFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTER-HRLAAPELELGRMTLAEYLEQVV 65

Query: 114 FTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKI 172
           F   R F  E  +  M++       V  L  +L Q  Y M++  N      E       +
Sbjct: 66  FYQPRDFTPEDFRAVMEEQSQPRPEVLALARDLGQ-RYRMYSLNNEGRDLNEYRIRTFGL 124

Query: 173 STYLSWTFCSCVIGM 187
             +L   F S  +G+
Sbjct: 125 GEFLLAFFTSSALGV 139

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 72.0 bits (177), Expect = 6e-16
 Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 8/144 (5%)

Query: 52  EKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECK----HPNAWIEFEMGMISEM 107
            K    + +FD+ + IV   F   + A+  ++   L   K       A+ + E G IS+ 
Sbjct: 3   RKEAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDE 62

Query: 108 ELARKFFTD-GRPFDLEGLKICMKKGYAYLD-GVEELLHELKQSNYEMHAFTNYPIWY-- 163
             A     +   P   E      +  +  L   V  ++H+L++  + +   +N    +  
Sbjct: 63  AFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTT 122

Query: 164 EIIEDKLKISTYLSWTFCSCVIGM 187
              E+  +I       + S  +GM
Sbjct: 123 FWPEEYPEIRDAADHIYLSQDLGM 146

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 64.4 bits (157), Expect = 5e-13
 Identities = 16/141 (11%), Positives = 49/141 (34%), Gaps = 12/141 (8%)

Query: 59  LLFDIMDTIV---RDPFYHDVPAFFGMSMKELIECKHPN-AWIEFEMGMISEMELARKF- 113
           ++FD+   ++   R+       A     ++E+++       +++ E G  SE E   +  
Sbjct: 8   IVFDLGGVLIHLNREESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELS 67

Query: 114 FTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTN-------YPIWYEII 166
              G+    + +   +      +   +    +  + +Y +   +N         +    +
Sbjct: 68  RYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFL 127

Query: 167 EDKLKISTYLSWTFCSCVIGM 187
                + ++    + SC +G 
Sbjct: 128 PSGRTLDSFFDKVYASCQMGK 148

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 18/141 (12%), Positives = 44/141 (31%), Gaps = 12/141 (8%)

Query: 59  LLFDIMDTIVR-DP--FYHDVPAFFGMSMKELI-ECKHPNAWIEFEMGMISEMELARKF- 113
           LL D+   ++  D      +       +++E     +    +++ E G+I+  E      
Sbjct: 31  LLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIR 90

Query: 114 FTDGRPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYE-------II 166
              G+    + +          +   +  L    +  Y ++  +N    +          
Sbjct: 91  EMMGKMVSDKQIDAAWNSFLVDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFP 150

Query: 167 EDKLKISTYLSWTFCSCVIGM 187
               K+  Y   T+ S  + M
Sbjct: 151 YRTFKVEDYFEKTYLSYEMKM 171

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 8/53 (15%), Positives = 17/53 (32%), Gaps = 1/53 (1%)

Query: 136 LDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIGM 187
                 LL   K++       +N P         +L+ +  +     S  +G+
Sbjct: 20  QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGV 72

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 22/149 (14%), Positives = 50/149 (33%), Gaps = 21/149 (14%)

Query: 59  LLFDIMDTIV-----RDPFYHDVPAFFGMSMKEL----IECKHPNAWIEFEMGMISEMEL 109
           + FD+ +T++      D F H +    G+ +K++    IE ++    +  +        L
Sbjct: 7   VTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVL 66

Query: 110 ARKFFTDGRPFDLEGLKICMKKGYAY--------LDGVEELLHELKQSNYEMHAFTNYPI 161
                       ++   +      A         L+G +E L  +K+   +     N   
Sbjct: 67  TGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMF 126

Query: 162 WY-EIIEDKLK---ISTYLSWTFCSCVIG 186
           W        L+   +  ++  TF +  + 
Sbjct: 127 WPGSYTRLLLERFGLMEFIDKTFFADEVL 155

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 1e-04
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 45/170 (26%)

Query: 45  SLSGKENEKRK--LPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIE------CKHPNA- 95
           SL  K+ ++    +P +  ++   +  +   H          + +++          +  
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALH----------RSIVDHYNIPKTFDSDDL 464

Query: 96  --------WIEF------EMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAY--LDGV 139
                   +          +     M L R  F D R F LE  KI      A+     +
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR-F-LEQ-KIR-HDSTAWNASGSI 520

Query: 140 EELLHELKQSNYEMHAFTNYPIWYEIIEDKL----KISTYLSWTFCSCVI 185
              L +LK   Y+ +   N P +  ++   L    KI   L  +  + ++
Sbjct: 521 LNTLQQLK--FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	207
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.85
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.83
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.83
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.82
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.81
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.8
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.8
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.77
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.77
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.76
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.75
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.74
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.74
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.74
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.74
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.73
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.73
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.72
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.72
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.72
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.72
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.71
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.71
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.71
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.71
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.71
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.71
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.7
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.7
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.7
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.69
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.69
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.69
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.69
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.69
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.68
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.67
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.67
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.66
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.66
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.65
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.64
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.64
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.64
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.63
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.63
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.62
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.61
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.6
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.59
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.59
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.59
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.59
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.59
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.58
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.58
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.57
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.57
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.57
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.56
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.56
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.56
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.54
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.53
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.52
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.51
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.51
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.47
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.47
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.46
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.42
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.42
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.38
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.34
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.33
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.33
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.3
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.3
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.2
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.12
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.08
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.08
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.08
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.06
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.05
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.01
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.99
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.98
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.97
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	98.96
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.94
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.89
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	98.89
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.88
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.87
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.86
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.82
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.82
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.8
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.73
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.72
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.68
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.68
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.65
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	98.62
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.61
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.61
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.6
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	98.54
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	98.37
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	97.72
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.35
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.14
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.09
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.04
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	97.99
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	97.93
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	97.91
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.87
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.75
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.7
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.63
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	97.59
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.51
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.46
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.45
3dao_A	283	Putative phosphatse; structural genomics, joint ce	97.29
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.29
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.23
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.16
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.14
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.1
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.04
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.02
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	96.91
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	96.86
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.81
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	96.01
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	95.88
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	95.54
4gxt_A	385	A conserved functionally unknown protein; structur	95.4
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	95.02
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	94.91
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	94.76
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	94.52
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	93.52
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	93.32
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	93.0
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	92.72
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	92.61
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	92.45
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	90.92
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	90.87
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	89.42
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	88.9
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	86.28
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	86.24
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	85.46
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	84.12
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	83.59
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	81.81

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.85  E-value=7.8e-21  Score=153.03  Aligned_cols=138  Identities=15%  Similarity=0.107  Sum_probs=93.7

Q ss_pred             CCeEEEEcCCcccCC-C-hhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH--
Q 028576           56 LPILLFDIMDTIVRD-P-FYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKI--  127 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~-~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~--  127 (207)
                      +|+||||+||||+|+ + +..++.+++   |.+.       ....+ ....| .+..+.++...+. ......+.+.+  
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~-------~~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPY-------TEDLH-RRIMG-VPEREGLPILMEALEIKDSLENFKKRV   71 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCC-------CHHHH-HHHTT-SCHHHHHHHHHHHTTCCSCHHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCC-------CHHHH-HHHhc-cchhhhhhhhhhcccchhhHHHHHHHH
Confidence            579999999999994 2 223344443   3321       00111 11123 2333444433332 22233333322  


Q ss_pred             ------HHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhh
Q 028576          128 ------CMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLI  200 (207)
Q Consensus       128 ------~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~  200 (207)
                            .+.....++||+.++|+.|+++|++++++||++.. ....++.+++.+|||.+++|++++..||+|++|+.|+.
T Consensus        72 ~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~  151 (216)
T 3kbb_A           72 HEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLE  151 (216)
T ss_dssp             HHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHH
Confidence                  22344678999999999999999999999999754 55577999999999999999999999999999999987


Q ss_pred             hh
Q 028576          201 LI  202 (207)
Q Consensus       201 ~~  202 (207)
                      ..
T Consensus       152 ~l  153 (216)
T 3kbb_A          152 RL  153 (216)
T ss_dssp             HH
T ss_pred             hh
Confidence            64

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.83  E-value=1.6e-19  Score=143.42  Aligned_cols=147  Identities=20%  Similarity=0.223  Sum_probs=107.8

Q ss_pred             CCCCeEEEEcCCcccCCC-hhchHHHH---HcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHH
Q 028576           54 RKLPILLFDIMDTIVRDP-FYHDVPAF---FGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKIC  128 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~-~~~~l~~~---~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~  128 (207)
                      |++++|+||+||||+|.. ....+..+   +|........ .....|..+..|.++.++++..+... +.....+.+.+.
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (200)
T 3cnh_A            2 MTIKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTE-RHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPEDFRAV   80 (200)
T ss_dssp             CCCCEEEECCBTTTBCCSSCHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHHHHHH
T ss_pred             CCceEEEEeCCCeeECCCcchHHHHHHHHHcCCCHHHHHH-HHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHHHHHH
Confidence            568899999999999943 22333333   3554432211 11234556678888887877766543 333344555555


Q ss_pred             HHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          129 MKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       129 ~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +.....++||+.++|+.|+++| +++|+||++.. ....++.+++.++||.++++++++..||+|++|+.++...
T Consensus        81 ~~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  154 (200)
T 3cnh_A           81 MEEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLA  154 (200)
T ss_dssp             HHHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHH
T ss_pred             HHhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHc
Confidence            5555678999999999999999 99999998754 4556788899999999999999999999999999988654

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.83  E-value=9.2e-20  Score=148.46  Aligned_cols=147  Identities=14%  Similarity=0.146  Sum_probs=112.0

Q ss_pred             CCCeEEEEcCCcccCCChhchHHHH--HcCC-HHHHHHhh-CchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHHH
Q 028576           55 KLPILLFDIMDTIVRDPFYHDVPAF--FGMS-MKELIECK-HPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKICM  129 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~~~~~l~~~--~g~~-~~~~~~~~-~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~~  129 (207)
                      ++++|+||+||||+|.........+  +|.. .+++...+ ....|..++.|.++.+++++.+.+. +.+.+.+++.+.+
T Consensus        27 ~ik~viFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (229)
T 4dcc_A           27 GIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQIDAAW  106 (229)
T ss_dssp             CCCEEEECSBTTTBCBCHHHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred             CCCEEEEeCCCeEEeCChHHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence            4689999999999995433222111  3553 34443322 2457888999999998888877665 6666777777776


Q ss_pred             HhcC-CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHH------HhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          130 KKGY-AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIE------DKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       130 ~~~~-~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il------~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .... .++||+.++|+.|+++ ++++|+||++.. ...++      +.+++.++||.+++|++++..||+|++|+.++..
T Consensus       107 ~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~  185 (229)
T 4dcc_A          107 NSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTED  185 (229)
T ss_dssp             HTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHH
T ss_pred             HHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHH
Confidence            6543 4679999999999998 999999998754 33333      6789999999999999999999999999999876


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       186 ~  186 (229)
T 4dcc_A          186 A  186 (229)
T ss_dssp             H
T ss_pred             c
Confidence            4

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.82  E-value=3.7e-20  Score=153.58  Aligned_cols=143  Identities=15%  Similarity=0.138  Sum_probs=94.4

Q ss_pred             CCCCCeEEEEcCCcccCC-Ch-hchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCC--CCHHHHHH
Q 028576           53 KRKLPILLFDIMDTIVRD-PF-YHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRP--FDLEGLKI  127 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~-~~-~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~--~~~~~l~~  127 (207)
                      .|++|+||||+||||+|+ +. ..++.+++    +++...... .+.+...| .+..+.++.+++. +..  .+..+...
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~----~~~g~~~~~-~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIA----AEIGISIDA-QFNESLKG-ISRDESLRRILQHGGKEGDFNSQERAQ   75 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHHHHHHHHHHH----HHTTCCCCT-TGGGGGTT-CCHHHHHHHHHHHTTCGGGCCHHHHHH
T ss_pred             CccCcEEEEcCCCcccCCHHHHHHHHHHHH----HHcCCCCCH-HHHHHHcC-CCHHHHHHHHHHHhhcccchhHHHHHH
Confidence            388999999999999994 22 22344443    111101111 12222234 3445555555543 221  22221111


Q ss_pred             -------HH----Hh--cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHH
Q 028576          128 -------CM----KK--GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       128 -------~~----~~--~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPei  194 (207)
                             .+    ..  ...++||+.++|+.|+++|++++++||+.. ...+++.+++.++||.+++|++++..||+|++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~-~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~  154 (243)
T 4g9b_A           76 LAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN-APTILAALELREFFTFCADASQLKNSKPDPEI  154 (243)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT-HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHH
T ss_pred             HHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc-hhhhhhhhhhccccccccccccccCCCCcHHH
Confidence                   01    11  124789999999999999999999999864 34467899999999999999999999999999


Q ss_pred             HHHhhhhh
Q 028576          195 ERGNLILI  202 (207)
Q Consensus       195 y~~~~~~~  202 (207)
                      |+.|+...
T Consensus       155 ~~~a~~~l  162 (243)
T 4g9b_A          155 FLAACAGL  162 (243)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHc
Confidence            99998764

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.81  E-value=3.5e-20  Score=147.42  Aligned_cols=149  Identities=16%  Similarity=0.178  Sum_probs=108.9

Q ss_pred             CCCCeEEEEcCCcccCCCh---hchHHHHHcCCHHHHHHh-hCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHH
Q 028576           54 RKLPILLFDIMDTIVRDPF---YHDVPAFFGMSMKELIEC-KHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKIC  128 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~---~~~l~~~~g~~~~~~~~~-~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~  128 (207)
                      +++++|+||+||||+|...   ...+.+.......+.... .....|..+..|.++..++++.+.+. +...+.+++...
T Consensus         5 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (206)
T 2b0c_A            5 EAKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHG   84 (206)
T ss_dssp             -CCCEEEECCBTTTEEEETHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred             ccccEEEEcCCCeeecCcHHHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            4578999999999999531   122222222333444433 34567888889988888887766654 444556666666


Q ss_pred             HHhc-CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHh-CCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          129 MKKG-YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDK-LKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       129 ~~~~-~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~-~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +... ..++||+.++|+.|+++|++++++||++.. ...+++. +++.++||.+++|++++..||+|++|+.++...
T Consensus        85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  161 (206)
T 2b0c_A           85 WQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAE  161 (206)
T ss_dssp             HHTCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred             HHHHhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHHHHHc
Confidence            6543 567899999999999999999999998743 3333445 688899999999999999999999999988654

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.80  E-value=1.7e-19  Score=146.49  Aligned_cols=146  Identities=17%  Similarity=0.121  Sum_probs=85.6

Q ss_pred             CCCCeEEEEcCCcccCC--ChhchHHHHH---cC--CHHHHHHhh----C-chHHHHHHhCCCCHHHHHHHHhhcCCCCC
Q 028576           54 RKLPILLFDIMDTIVRD--PFYHDVPAFF---GM--SMKELIECK----H-PNAWIEFEMGMISEMELARKFFTDGRPFD  121 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~--~~~~~l~~~~---g~--~~~~~~~~~----~-~~~w~~~e~G~Is~~e~~~~~~~~g~~~~  121 (207)
                      |++++|+||+||||+|.  .+..++.+++   |.  +.+++...+    + ...|.....|..+..++.+.+   +.+..
T Consensus         1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~---~~~~~   77 (220)
T 2zg6_A            1 MKYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYIL---GIYPS   77 (220)
T ss_dssp             CCCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHH---TCCCC
T ss_pred             CCceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHc---CCCCc
Confidence            46789999999999993  2333444443   43  233333221    1 123444445555543443332   33333


Q ss_pred             HHHHHHHHHh-----cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHH
Q 028576          122 LEGLKICMKK-----GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       122 ~~~l~~~~~~-----~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                      .+........     ...++||+.++|++|+++|++++|+||++......++.+|+.++||.+++|++++..||+|++|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~  157 (220)
T 2zg6_A           78 ERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFG  157 (220)
T ss_dssp             HHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHHHHHHHHHHTCGGGCSEEC-----------CCHHH
T ss_pred             HHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHH
Confidence            2322222221     23578999999999999999999999997666667788999999999999999999999999999


Q ss_pred             Hhhhhh
Q 028576          197 GNLILI  202 (207)
Q Consensus       197 ~~~~~~  202 (207)
                      .++...
T Consensus       158 ~~~~~~  163 (220)
T 2zg6_A          158 FALAKV  163 (220)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            998653

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.80  E-value=1.6e-18  Score=139.98  Aligned_cols=149  Identities=19%  Similarity=0.192  Sum_probs=108.2

Q ss_pred             CCCCCeEEEEcCCcccCC--ChhchHHHHH---cCC--HHH--HHHhhCchHHHHHHhCCCCHHHHHHH----Hhhc-CC
Q 028576           53 KRKLPILLFDIMDTIVRD--PFYHDVPAFF---GMS--MKE--LIECKHPNAWIEFEMGMISEMELARK----FFTD-GR  118 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~--~~~~~l~~~~---g~~--~~~--~~~~~~~~~w~~~e~G~Is~~e~~~~----~~~~-g~  118 (207)
                      +|++++|+||+||||+|.  .+..++.+++   |..  ...  .+.......|..+..|.++..++...    +++. +.
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGY   83 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred             cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC
Confidence            367899999999999993  2222333332   543  211  12223345788888899988766543    3332 55


Q ss_pred             CCCHHHHHHHHH----hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChH
Q 028576          119 PFDLEGLKICMK----KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCL  193 (207)
Q Consensus       119 ~~~~~~l~~~~~----~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPe  193 (207)
                      +.+.+.+...+.    ....++||+.++|+.|+++ ++++++||++.. ....++.+++.++||.++++++++..||+|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~  162 (238)
T 3ed5_A           84 EADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKE  162 (238)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHH
T ss_pred             CCcHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCCCChH
Confidence            555555544432    3457899999999999999 999999998754 4557789999999999999999999999999


Q ss_pred             HHHHhhhhh
Q 028576          194 KERGNLILI  202 (207)
Q Consensus       194 iy~~~~~~~  202 (207)
                      +|+.++...
T Consensus       163 ~~~~~~~~~  171 (238)
T 3ed5_A          163 YFNYVFERI  171 (238)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHc
Confidence            999998754

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.77  E-value=1.8e-18  Score=138.23  Aligned_cols=147  Identities=11%  Similarity=0.177  Sum_probs=105.6

Q ss_pred             CCCeEEEEcCCcccCCChhc--hHHHHHcCCH-HHHHHh-hCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHHH
Q 028576           55 KLPILLFDIMDTIVRDPFYH--DVPAFFGMSM-KELIEC-KHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKICM  129 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~~~~--~l~~~~g~~~-~~~~~~-~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~~  129 (207)
                      .+++|+||+||||+|.....  .....+|... .+.... .....|..+..|.++..++++.+.+. +...+.+++...+
T Consensus         4 m~k~iiFDlDGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (211)
T 2i6x_A            4 MIRNIVFDLGGVLIHLNREESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDAL   83 (211)
T ss_dssp             CCSEEEECSBTTTEEECHHHHHHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred             cceEEEEeCCCeeEecchHHHHHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence            36899999999999943221  1111134432 222221 22346778888988887777766554 4445566665555


Q ss_pred             Hh-cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHh------CCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          130 KK-GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDK------LKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       130 ~~-~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~------~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .. ...++||+.++|+.|++ |++++++||++.. ...+++.      +++..+||.+++|++++..||+|++|+.++..
T Consensus        84 ~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~  162 (211)
T 2i6x_A           84 LGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIAD  162 (211)
T ss_dssp             GGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHHH
T ss_pred             HHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHHH
Confidence            43 24678999999999998 9999999998754 4446676      79999999999999999999999999998875


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       163 ~  163 (211)
T 2i6x_A          163 S  163 (211)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.77  E-value=1.4e-18  Score=155.13  Aligned_cols=150  Identities=11%  Similarity=-0.001  Sum_probs=101.7

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHH---cCCHHHHH---H-hhCchHHHHHHhCCCCHHHHHHHHhhc--------CC
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFF---GMSMKELI---E-CKHPNAWIEFEMGMISEMELARKFFTD--------GR  118 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~---g~~~~~~~---~-~~~~~~w~~~e~G~Is~~e~~~~~~~~--------g~  118 (207)
                      |++++|+||+||||++......+....   +...+.+.   . ......|.++..|.++.+++.+.+.+.        ..
T Consensus         1 M~~k~viFD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (555)
T 3i28_A            1 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKV   80 (555)
T ss_dssp             ---CEEEECTBTTTEESCTHHHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CceEEEEEecCCeeecchhHHHHHHHHHHhCCcHHHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhccCC
Confidence            457899999999999865555444442   44332222   1 222346778888988887776544321        11


Q ss_pred             C----CCHHHHHHHHHhcCCcchhHHHHHHHHhHCCCeEEEEcCc--H-HHHHHHHHh--CCcccccCeEEEccccCCCC
Q 028576          119 P----FDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNY--P-IWYEIIEDK--LKISTYLSWTFCSCVIGMFS  189 (207)
Q Consensus       119 ~----~~~~~l~~~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~--~-~~~~~il~~--~~l~~yFD~v~~S~evg~~K  189 (207)
                      .    ...+++...+.....++||+.++|+.|+++|++++|+||+  . ......+..  .++.+|||.+++|++++..|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~K  160 (555)
T 3i28_A           81 CLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVK  160 (555)
T ss_dssp             CCCTTCCHHHHHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCT
T ss_pred             CCCccccHHHHHHHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCC
Confidence            1    1144444444455788999999999999999999999998  1 111111122  27889999999999999999


Q ss_pred             CChHHHHHhhhhhh
Q 028576          190 KQCLKERGNLILIF  203 (207)
Q Consensus       190 PdPeiy~~~~~~~~  203 (207)
                      |+|++|+.++...=
T Consensus       161 P~p~~~~~~~~~lg  174 (555)
T 3i28_A          161 PEPQIYKFLLDTLK  174 (555)
T ss_dssp             TCHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHcC
Confidence            99999999987653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.76  E-value=6.6e-19  Score=142.22  Aligned_cols=67  Identities=15%  Similarity=0.115  Sum_probs=59.6

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|++ |++++|+||++.. ....++++++.+|||.+++|+  +..||+|++|+.++...
T Consensus        83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~l  150 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTH  150 (210)
T ss_dssp             CEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CCCCCChHHHHHHHHHc
Confidence            4678999999999999 9999999999754 555778999999999999987  89999999999998754

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.75  E-value=2.8e-17  Score=132.49  Aligned_cols=147  Identities=17%  Similarity=0.188  Sum_probs=104.3

Q ss_pred             CCCCeEEEEcCCcccCCC--hhchHHHHH---cC-----CHHHHHHh---hCchHHHHHHhCCCCHHHHHHH----Hhhc
Q 028576           54 RKLPILLFDIMDTIVRDP--FYHDVPAFF---GM-----SMKELIEC---KHPNAWIEFEMGMISEMELARK----FFTD  116 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~-----~~~~~~~~---~~~~~w~~~e~G~Is~~e~~~~----~~~~  116 (207)
                      |++++|+||+||||+|..  ...++.+++   |.     +.+++...   .....|..+..|.++..++.+.    +++.
T Consensus         3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA   82 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            568999999999999931  222233332   33     33433322   2235688888899998776543    3332


Q ss_pred             -CCCCCHH---HHHHHH----HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCC
Q 028576          117 -GRPFDLE---GLKICM----KKGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGM  187 (207)
Q Consensus       117 -g~~~~~~---~l~~~~----~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~  187 (207)
                       +.+ ..+   .+...+    .....++||+.++|+.|+ +|++++++||++. .....++.+++.++||.++++++++.
T Consensus        83 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~  160 (240)
T 3qnm_A           83 VGVE-DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGV  160 (240)
T ss_dssp             TTCC-CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC
T ss_pred             cCCC-cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCCC
Confidence             443 222   222222    234578999999999999 8999999999864 44557788899999999999999999


Q ss_pred             CCCChHHHHHhhhhh
Q 028576          188 FSKQCLKERGNLILI  202 (207)
Q Consensus       188 ~KPdPeiy~~~~~~~  202 (207)
                      .||+|++|+.++...
T Consensus       161 ~kp~~~~~~~~~~~l  175 (240)
T 3qnm_A          161 LKPRPEIFHFALSAT  175 (240)
T ss_dssp             CTTSHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHc
Confidence            999999999998764

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.74  E-value=1e-17  Score=135.75  Aligned_cols=142  Identities=11%  Similarity=-0.016  Sum_probs=92.8

Q ss_pred             cccCCCCCeEEEEcCCcccCCC--hhchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCC-CCC
Q 028576           50 ENEKRKLPILLFDIMDTIVRDP--FYHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTDGR-PFD  121 (207)
Q Consensus        50 ~~~~~~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~-~~~  121 (207)
                      ....+++++|+||+||||+|..  +..++.+++   |.  ..+.+..          ..| .+..+.++.++.... ...
T Consensus        13 ~~~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~g-~~~~~~~~~~~~~~~~~~~   81 (237)
T 4ex6_A           13 GAPAAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILS----------TVG-RPLPASLAGLLGVPVEDPR   81 (237)
T ss_dssp             ----CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHH----------HTT-SCHHHHHHHHHTSCTTSHH
T ss_pred             CCCcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHH----------hcC-ccHHHHHHHHhCCCCCHHH
Confidence            3344788999999999999942  122233332   21  1111111          123 223344444443211 111


Q ss_pred             HHHHH--------HHHH--hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCC
Q 028576          122 LEGLK--------ICMK--KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSK  190 (207)
Q Consensus       122 ~~~l~--------~~~~--~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KP  190 (207)
                      ...+.        ..+.  ....++||+.++|+.|+++|++++++||++.. ...+++.+++.++||.++++++++..||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp  161 (237)
T 4ex6_A           82 VAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKP  161 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTT
T ss_pred             HHHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCC
Confidence            12221        1122  44568999999999999999999999998754 5557788999999999999999999999


Q ss_pred             ChHHHHHhhhhh
Q 028576          191 QCLKERGNLILI  202 (207)
Q Consensus       191 dPeiy~~~~~~~  202 (207)
                      +|++|+.++...
T Consensus       162 ~~~~~~~~~~~l  173 (237)
T 4ex6_A          162 HPDMALHVARGL  173 (237)
T ss_dssp             SSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHc
Confidence            999999998764

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.74  E-value=5.8e-17  Score=130.30  Aligned_cols=150  Identities=11%  Similarity=0.127  Sum_probs=96.3

Q ss_pred             CCCCCeEEEEcCCcccCC-ChhchHHHHHcCCHHHHHHh----hCchHHHHHHhCCCC-H----HHHHHHHhhc-CCCCC
Q 028576           53 KRKLPILLFDIMDTIVRD-PFYHDVPAFFGMSMKELIEC----KHPNAWIEFEMGMIS-E----MELARKFFTD-GRPFD  121 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~-~~~~~l~~~~g~~~~~~~~~----~~~~~w~~~e~G~Is-~----~e~~~~~~~~-g~~~~  121 (207)
                      ++++++|+||+||||+|. +........++.....+...    .....|.....|... .    .+.+..+.+. +.+.+
T Consensus         2 M~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (230)
T 3um9_A            2 MHAIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD   81 (230)
T ss_dssp             CSSCCEEEECSBTTTBCGGGGHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCCceEEEEcCCCCcCcchHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCCCC
Confidence            356899999999999993 22222222222221111111    001112222223222 1    2223333333 55545


Q ss_pred             HHHHHHHHH--hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHh
Q 028576          122 LEGLKICMK--KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGN  198 (207)
Q Consensus       122 ~~~l~~~~~--~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~  198 (207)
                      .+.......  ....++||+.++|+.|+++|++++++||++.. ....++.+++.++||.++++++++..||+|++|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~  161 (230)
T 3um9_A           82 ADGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELA  161 (230)
T ss_dssp             HHHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHH
Confidence            443333222  34578899999999999999999999998754 555778899999999999999999999999999999


Q ss_pred             hhhh
Q 028576          199 LILI  202 (207)
Q Consensus       199 ~~~~  202 (207)
                      +...
T Consensus       162 ~~~~  165 (230)
T 3um9_A          162 MDTL  165 (230)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8764

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.74  E-value=4.9e-18  Score=141.11  Aligned_cols=68  Identities=15%  Similarity=-0.009  Sum_probs=60.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++++.|+++|++++++||+... ...++++|+.+|||.+++|++++..||+|++|+.|+...
T Consensus       116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~~~-~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~l  183 (250)
T 4gib_A          116 DILPGIESLLIDVKSNNIKIGLSSASKNA-INVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGL  183 (250)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSCTTH-HHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHhcccccccccccchh-hhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHh
Confidence            46899999999999999999998887543 345688999999999999999999999999999998754

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.73  E-value=2e-17  Score=133.50  Aligned_cols=86  Identities=9%  Similarity=0.028  Sum_probs=70.1

Q ss_pred             CCCCCHHHHHHHH--HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChH
Q 028576          117 GRPFDLEGLKICM--KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCL  193 (207)
Q Consensus       117 g~~~~~~~l~~~~--~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPe  193 (207)
                      +.+.+.+......  .....++||+.++|+.|+++|++++++||++.. ....++.+++.++||.++++++++..||+|+
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~  159 (233)
T 3umb_A           80 NLPLGNHAEATLMREYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPA  159 (233)
T ss_dssp             TCCCCHHHHHHHHHHHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHH
T ss_pred             CCCCCHHHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHH
Confidence            5555544333322  234678899999999999999999999999754 5557789999999999999999999999999


Q ss_pred             HHHHhhhhh
Q 028576          194 KERGNLILI  202 (207)
Q Consensus       194 iy~~~~~~~  202 (207)
                      +|+.++...
T Consensus       160 ~~~~~~~~~  168 (233)
T 3umb_A          160 AYALAPRAF  168 (233)
T ss_dssp             HHTHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999988754

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.73  E-value=8.6e-18  Score=132.70  Aligned_cols=140  Identities=12%  Similarity=0.132  Sum_probs=91.4

Q ss_pred             CCCCeEEEEcCCcccCCC--hhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH
Q 028576           54 RKLPILLFDIMDTIVRDP--FYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKI  127 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~  127 (207)
                      +.+++|+||+||||+|..  +..++.+++   |...       ....+..+ .| .+..+.++.+... +...+.+++..
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~   73 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISI-------DHLPPSFF-IG-GNTKQVWENILRDEYDKWDVSTLQE   73 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCC-------TTSCHHHH-TT-SCGGGCHHHHHGGGGGGSCHHHHHH
T ss_pred             ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCC-------CHHHHHHH-cC-CCHHHHHHHHHHhhcCCCCHHHHHH
Confidence            447899999999999942  122233322   2110       00111111 12 1223344444433 22333333332


Q ss_pred             HH----Hhc-----CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHH
Q 028576          128 CM----KKG-----YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERG  197 (207)
Q Consensus       128 ~~----~~~-----~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~  197 (207)
                      .+    ...     ..++||+.++|++|+++|++++++||.+. .....++.+++.++||.++++++++..||+|++|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~  153 (214)
T 3e58_A           74 EYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLT  153 (214)
T ss_dssp             HHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHH
T ss_pred             HHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHH
Confidence            22    121     25789999999999999999999999875 455678999999999999999999999999999999


Q ss_pred             hhhhh
Q 028576          198 NLILI  202 (207)
Q Consensus       198 ~~~~~  202 (207)
                      ++...
T Consensus       154 ~~~~~  158 (214)
T 3e58_A          154 ALKQL  158 (214)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            98754

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.72  E-value=6.1e-17  Score=135.70  Aligned_cols=71  Identities=13%  Similarity=-0.028  Sum_probs=62.6

Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ....++||+.++|+.|++ |++++|+||++.. ....++.+++..|||.+++|++++..||+|++|+.++...
T Consensus       118 ~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~  189 (260)
T 2gfh_A          118 QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLL  189 (260)
T ss_dssp             HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHH
T ss_pred             hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHc
Confidence            345789999999999997 5999999999755 4457788999999999999999999999999999998754

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.72  E-value=1.3e-16  Score=130.22  Aligned_cols=71  Identities=11%  Similarity=0.017  Sum_probs=63.7

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+++|++++++||++.. ....++.+++..+||.++++++++..||+|++|+.++...
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  174 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRL  174 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHc
Confidence            4578899999999999999999999998754 5557789999999999999999999999999999988654

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.72  E-value=1.6e-17  Score=136.50  Aligned_cols=69  Identities=10%  Similarity=0.085  Sum_probs=61.3

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++.. ....++.+++. +||.++++++++..||+|++|+.++...
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l  178 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVL  178 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHc
Confidence            357899999999999999999999998754 55577888998 9999999999999999999999998754

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.72  E-value=1.7e-17  Score=134.23  Aligned_cols=72  Identities=22%  Similarity=0.161  Sum_probs=64.1

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhhc
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFI  204 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~~  204 (207)
                      ..++||+.++|+.|+++|++++++||++. .....++.+++.++||.++++++++..||+|++|+.++...=+
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi  174 (231)
T 3kzx_A          102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINI  174 (231)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTC
T ss_pred             ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCC
Confidence            46789999999999999999999999874 4556779999999999999999999999999999999876533

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.71  E-value=3.6e-17  Score=132.90  Aligned_cols=137  Identities=12%  Similarity=0.009  Sum_probs=89.8

Q ss_pred             CCCCeEEEEcCCcccCCC--hhchHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc--CCCCCHHH
Q 028576           54 RKLPILLFDIMDTIVRDP--FYHDVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTD--GRPFDLEG  124 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~--g~~~~~~~  124 (207)
                      +++++|+||+||||+|..  ...++.+++   |..  .+.....          .|. ...+.++.++..  +...+.+.
T Consensus        21 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~g~-~~~~~~~~~~~~~~~~~~~~~~   89 (247)
T 3dv9_A           21 IDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMH----------EGR-TGASTINIVSRRERGHDATEEE   89 (247)
T ss_dssp             CCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHT----------TTS-CHHHHHHHHHHHHHSSCCCHHH
T ss_pred             CCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHH----------hCC-ChHHHHHHHHHHhcCCCCCHHH
Confidence            568999999999999942  122233332   221  1111111          132 222333333321  34444444


Q ss_pred             HHHHHH---------hcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCccccc--CeEEEccccCCCCCCh
Q 028576          125 LKICMK---------KGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYL--SWTFCSCVIGMFSKQC  192 (207)
Q Consensus       125 l~~~~~---------~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yF--D~v~~S~evg~~KPdP  192 (207)
                      +...+.         ....++||+.++|+.|+++|++++++||++. .....++. ++.++|  |.++++++++..||+|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~  168 (247)
T 3dv9_A           90 IKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNP  168 (247)
T ss_dssp             HHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSS
T ss_pred             HHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCC
Confidence            433211         1246789999999999999999999999874 34556677 999999  9999999999999999


Q ss_pred             HHHHHhhhhh
Q 028576          193 LKERGNLILI  202 (207)
Q Consensus       193 eiy~~~~~~~  202 (207)
                      ++|+.++...
T Consensus       169 ~~~~~~~~~l  178 (247)
T 3dv9_A          169 EPYLMALKKG  178 (247)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHc
Confidence            9999998764

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.71  E-value=7.8e-17  Score=132.93  Aligned_cols=70  Identities=17%  Similarity=0.038  Sum_probs=62.8

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++.. ...+++.+++.++|+.++++++++..||+|++|+.++...
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  183 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKF  183 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHh
Confidence            467899999999999999999999998754 4557789999999999999999999999999999988654

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.71  E-value=4.5e-17  Score=135.89  Aligned_cols=145  Identities=19%  Similarity=0.226  Sum_probs=97.5

Q ss_pred             CCeEEEEcCCcccC--CChhchHHHHH---cC--CHHHHHHhh---CchHHHHH-----HhCCCCHHHHHH----HHhhc
Q 028576           56 LPILLFDIMDTIVR--DPFYHDVPAFF---GM--SMKELIECK---HPNAWIEF-----EMGMISEMELAR----KFFTD  116 (207)
Q Consensus        56 ~~~IlFDLDGTLvD--~~~~~~l~~~~---g~--~~~~~~~~~---~~~~w~~~-----e~G~Is~~e~~~----~~~~~  116 (207)
                      +++|+||+||||+|  .....++.+++   |.  +.+.+...+   ....|..+     ..| ++..+++.    ..+..
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~   79 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG-LTSRQWWLDVVLQTFHL   79 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGT-CCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccC-CCHHHHHHHHHHHHHHH
Confidence            47999999999999  23334444443   44  333332211   11223222     245 34444443    33332


Q ss_pred             -CCCCCHHHHH----HHHHh-----cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccC
Q 028576          117 -GRPFDLEGLK----ICMKK-----GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIG  186 (207)
Q Consensus       117 -g~~~~~~~l~----~~~~~-----~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg  186 (207)
                       +. .+.+.+.    ..+..     ...++||+.++|+.|+++|++++|+||++.....+++.+++.++||.+++|++++
T Consensus        80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~l~~~gl~~~f~~~~~~~~~~  158 (263)
T 3k1z_A           80 AGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAG  158 (263)
T ss_dssp             TTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTTHHHHHHHTTCGGGCSCEEEHHHHS
T ss_pred             cCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHHHHHHHHhCCcHHhhhEEEeecccC
Confidence             33 3434332    22222     2357899999999999999999999998766666789999999999999999999


Q ss_pred             CCCCChHHHHHhhhhh
Q 028576          187 MFSKQCLKERGNLILI  202 (207)
Q Consensus       187 ~~KPdPeiy~~~~~~~  202 (207)
                      ..||+|++|+.++...
T Consensus       159 ~~Kp~~~~~~~~~~~~  174 (263)
T 3k1z_A          159 WPKPDPRIFQEALRLA  174 (263)
T ss_dssp             SCTTSHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHc
Confidence            9999999999998754

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.71  E-value=6.7e-17  Score=129.93  Aligned_cols=139  Identities=14%  Similarity=0.021  Sum_probs=92.3

Q ss_pred             CCCeEEEEcCCcccCCC--hhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH-
Q 028576           55 KLPILLFDIMDTIVRDP--FYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKI-  127 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~-  127 (207)
                      .+++|+||+||||+|..  +..++.+++   |...       ....+..+ .| .+..+.++.+... +...+.+.+.. 
T Consensus         5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (233)
T 3s6j_A            5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPL-------AMWRIHRK-IG-MSGGLMLKSLSRETGMSITDEQAERL   75 (233)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCC-------CHHHHHHH-TT-SCHHHHHHHHHHC----CCHHHHHHH
T ss_pred             cCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCC-------CHHHHHHH-cC-CcHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            46899999999999941  112222222   2211       00111111 23 2334555555543 43334333221 


Q ss_pred             ------HHH---hcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHH
Q 028576          128 ------CMK---KGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERG  197 (207)
Q Consensus       128 ------~~~---~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~  197 (207)
                            .+.   ....++||+.++|+.|+++|++++++||++. .....++.+++.++||.++++++++..||+|++|+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~  155 (233)
T 3s6j_A           76 SEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLA  155 (233)
T ss_dssp             HHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHH
T ss_pred             HHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHH
Confidence                  111   2256789999999999999999999999874 455677899999999999999999999999999999


Q ss_pred             hhhhh
Q 028576          198 NLILI  202 (207)
Q Consensus       198 ~~~~~  202 (207)
                      ++...
T Consensus       156 ~~~~l  160 (233)
T 3s6j_A          156 AAKKI  160 (233)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            98754

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.71  E-value=3.8e-17  Score=133.62  Aligned_cols=71  Identities=15%  Similarity=0.072  Sum_probs=63.4

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+++|++++|+||++.. ....++.+++..+||.++++++++..||+|++|+.++...
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  163 (241)
T 2hoq_A           92 YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAF  163 (241)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHH
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHc
Confidence            4568899999999999999999999998754 4457789999999999999999999999999999988754

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.71  E-value=3.1e-17  Score=134.13  Aligned_cols=138  Identities=13%  Similarity=0.066  Sum_probs=90.3

Q ss_pred             CCCCCeEEEEcCCcccCCC--hhchHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc--CCCCCHH
Q 028576           53 KRKLPILLFDIMDTIVRDP--FYHDVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTD--GRPFDLE  123 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~--g~~~~~~  123 (207)
                      ++++++|+||+||||+|..  +..++.+++   |..  .+.....          .|. ...+.++.++..  +...+.+
T Consensus        21 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~g~-~~~~~~~~~~~~~~~~~~~~~   89 (243)
T 3qxg_A           21 RKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMH----------EGR-TGASTINIVFQRELGKEATQE   89 (243)
T ss_dssp             -CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHT----------TTS-CHHHHHHHHHHHHHSSCCCHH
T ss_pred             cccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHH----------hCC-CHHHHHHHHHHHHhCCCCCHH
Confidence            3568999999999999942  112233332   221  1111111          132 222333333221  3444444


Q ss_pred             HHHHHH-------H--hcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCccccc--CeEEEccccCCCCCC
Q 028576          124 GLKICM-------K--KGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYL--SWTFCSCVIGMFSKQ  191 (207)
Q Consensus       124 ~l~~~~-------~--~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yF--D~v~~S~evg~~KPd  191 (207)
                      .+...+       .  ....++||+.++|+.|+++|++++++||++. .....++. ++.++|  |.++++++++..||+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~  168 (243)
T 3qxg_A           90 EIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPN  168 (243)
T ss_dssp             HHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTS
T ss_pred             HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCC
Confidence            333221       1  1246789999999999999999999999874 44455677 999999  999999999999999


Q ss_pred             hHHHHHhhhhh
Q 028576          192 CLKERGNLILI  202 (207)
Q Consensus       192 Peiy~~~~~~~  202 (207)
                      |++|+.++...
T Consensus       169 ~~~~~~~~~~l  179 (243)
T 3qxg_A          169 PEPYLMALKKG  179 (243)
T ss_dssp             SHHHHHHHHHT
T ss_pred             hHHHHHHHHHc
Confidence            99999998754

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.70  E-value=2.7e-17  Score=133.78  Aligned_cols=141  Identities=18%  Similarity=0.162  Sum_probs=92.0

Q ss_pred             CCCeEEEEcCCcccCCC--hhchHHHHHcCCHHHHHHh-hCchHHHHHHhCCCCHHHHHHHHhhcCCCCC--HHHHHHHH
Q 028576           55 KLPILLFDIMDTIVRDP--FYHDVPAFFGMSMKELIEC-KHPNAWIEFEMGMISEMELARKFFTDGRPFD--LEGLKICM  129 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~--~~~~l~~~~g~~~~~~~~~-~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~--~~~l~~~~  129 (207)
                      .+++|+||+||||+|..  +..++.+++    +++... .....+.++ .| .+..+.++.++.. ...+  .+.+...+
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~-~g-~~~~~~~~~~~~~-~~~~~~~~~~~~~~   74 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTL----KELGLEEYYPDNVTKY-IG-GGVRALLEKVLKD-KFREEYVEVFRKHY   74 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHH----HHTTCGGGCCSCGGGG-CS-SCHHHHHHHHHGG-GCCTHHHHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHH----HHcCCCCCCHHHHHHH-hC-cCHHHHHHHHhCh-HHHHHHHHHHHHHH
Confidence            46899999999999942  222233332    111100 111112111 23 2344555555431 1111  12222333


Q ss_pred             H----hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          130 K----KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       130 ~----~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .    ....++||+.++|+.|+++|++++|+||++.. ....++.+++.++|+.++++++++..||+|++|+.++...
T Consensus        75 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~  152 (222)
T 2nyv_A           75 LENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEIL  152 (222)
T ss_dssp             HHCSCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHH
T ss_pred             HHhccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHh
Confidence            2    23467899999999999999999999998754 5557789999999999999999999999999999988654

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.70  E-value=3.7e-17  Score=134.84  Aligned_cols=139  Identities=12%  Similarity=0.076  Sum_probs=94.4

Q ss_pred             CCCCeEEEEcCCcccCCC--hhchHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCC---H
Q 028576           54 RKLPILLFDIMDTIVRDP--FYHDVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFD---L  122 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~---~  122 (207)
                      +++++|+||+||||+|..  +..++.+++   |..  .+++.         ....| .+..+.++.+.+. +...+   .
T Consensus        26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~~~g-~~~~~~~~~~~~~~~~~~~~~~~   95 (259)
T 4eek_A           26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIA---------MYFTG-QRFDGVLAYLAQQHDFVPPPDFL   95 (259)
T ss_dssp             CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHH---------HHTTT-CCHHHHHHHHHHHHCCCCCTTHH
T ss_pred             cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHH---------HHHhC-CCHHHHHHHHHHHcCCCCCHHHH
Confidence            568999999999999942  222233332   221  11111         11123 2344555544432 33222   2


Q ss_pred             HHHHHHHH---hcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCe-EEEccccC-CCCCChHHHH
Q 028576          123 EGLKICMK---KGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSW-TFCSCVIG-MFSKQCLKER  196 (207)
Q Consensus       123 ~~l~~~~~---~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~-v~~S~evg-~~KPdPeiy~  196 (207)
                      +.+...+.   ....++||+.++|+.|+++|++++|+||++. .....++.+++.++||. ++++++++ ..||+|++|+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~  175 (259)
T 4eek_A           96 DVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYT  175 (259)
T ss_dssp             HHHHHHHHHHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHH
T ss_pred             HHHHHHHHHHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHH
Confidence            22222222   4467889999999999999999999999875 45567789999999999 99999999 9999999999


Q ss_pred             Hhhhhh
Q 028576          197 GNLILI  202 (207)
Q Consensus       197 ~~~~~~  202 (207)
                      .++...
T Consensus       176 ~~~~~l  181 (259)
T 4eek_A          176 FAAQQL  181 (259)
T ss_dssp             HHHHHT
T ss_pred             HHHHHc
Confidence            998764

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.70  E-value=2.8e-16  Score=128.94  Aligned_cols=141  Identities=12%  Similarity=0.050  Sum_probs=93.2

Q ss_pred             CCCCeEEEEcCCcccCC--ChhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH
Q 028576           54 RKLPILLFDIMDTIVRD--PFYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKI  127 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~--~~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~  127 (207)
                      +++++|+||+||||+|.  .+..++.+++   |...       ..... ....| .+..+.++.+.+. +.+.+.+++..
T Consensus        28 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~-------~~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~   98 (250)
T 3l5k_A           28 QPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKY-------SWDVK-SLVMG-KKALEAAQIIIDVLQLPMSKEELVE   98 (250)
T ss_dssp             CCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCC-------CHHHH-HHHTT-CCHHHHHHHHHHHHTCSSCHHHHHH
T ss_pred             cCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCC-------CHHHH-HHhcC-CCHHHHHHHHHHHhCCCCCHHHHHH
Confidence            56899999999999993  1122233332   2211       00111 11123 2344555555543 44444444433


Q ss_pred             HH-------HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHh-CCcccccCeEEEcc--ccCCCCCChHHHH
Q 028576          128 CM-------KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDK-LKISTYLSWTFCSC--VIGMFSKQCLKER  196 (207)
Q Consensus       128 ~~-------~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~-~~l~~yFD~v~~S~--evg~~KPdPeiy~  196 (207)
                      .+       .....++||+.++|+.|+++|++++|+||++.. ....+.. +++.++||.+++++  +++..||+|++|+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~  178 (250)
T 3l5k_A           99 ESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFL  178 (250)
T ss_dssp             HHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHH
T ss_pred             HHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHH
Confidence            22       234578999999999999999999999998743 4444433 58899999999999  9999999999999


Q ss_pred             Hhhhhhh
Q 028576          197 GNLILIF  203 (207)
Q Consensus       197 ~~~~~~~  203 (207)
                      .++...=
T Consensus       179 ~~~~~lg  185 (250)
T 3l5k_A          179 ACAKRFS  185 (250)
T ss_dssp             HHHHTSS
T ss_pred             HHHHHcC
Confidence            9987643

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.69  E-value=2.1e-16  Score=130.41  Aligned_cols=150  Identities=13%  Similarity=0.053  Sum_probs=94.6

Q ss_pred             CCCCeEEEEcCCcccCC-C-h-hchHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHH
Q 028576           54 RKLPILLFDIMDTIVRD-P-F-YHDVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEG  124 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~-~-~-~~~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~  124 (207)
                      +++++|+||+||||+|. . . ..++...+   |..  .+.+...........+ ...++.....+.+... +...+.+.
T Consensus        12 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   90 (277)
T 3iru_A           12 GPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHI-RRMLGNSRIANAWLSIKGQASNEED   90 (277)
T ss_dssp             CCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHH-HHHTTSHHHHHHHHHHHSSCCCHHH
T ss_pred             ccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHH-HHhccchHHHHHHHHHhccCCCHHH
Confidence            46899999999999993 2 2 23344443   432  2222222221111111 1111112222222222 33343332


Q ss_pred             HHH---H--------HHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccc-cCeEEEccccCCCCCC
Q 028576          125 LKI---C--------MKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTY-LSWTFCSCVIGMFSKQ  191 (207)
Q Consensus       125 l~~---~--------~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~y-FD~v~~S~evg~~KPd  191 (207)
                      +..   .        +.....++||+.++|+.|+++|++++++||++.. ....++.+++.++ ||.++++++++..||+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~  170 (277)
T 3iru_A           91 IKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPF  170 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTS
T ss_pred             HHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCC
Confidence            221   1        2234578999999999999999999999998754 4557788888888 9999999999999999


Q ss_pred             hHHHHHhhhhhhc
Q 028576          192 CLKERGNLILIFI  204 (207)
Q Consensus       192 Peiy~~~~~~~~~  204 (207)
                      |++|+.++...=+
T Consensus       171 ~~~~~~~~~~lgi  183 (277)
T 3iru_A          171 PDMALKVALELEV  183 (277)
T ss_dssp             SHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999876533

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.69  E-value=6.4e-17  Score=136.26  Aligned_cols=68  Identities=10%  Similarity=0.098  Sum_probs=59.0

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHHH-HHHHHh---CCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIWY-EIIEDK---LKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~-~~il~~---~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++... ..++++   .++.+|||.++++ +++ .||+|++|+.++...
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~l  200 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSI  200 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHH
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHh
Confidence            4688999999999999999999999998654 345664   4699999999999 999 999999999998754

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.69  E-value=5.6e-16  Score=125.32  Aligned_cols=70  Identities=10%  Similarity=0.060  Sum_probs=62.7

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++++||++.. ....++.+++..+||.++++++++..||+|++|+.++...
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  164 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQAL  164 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHc
Confidence            467899999999999999999999998754 5557789999999999999999999999999999987654

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.69  E-value=2.2e-16  Score=126.84  Aligned_cols=147  Identities=11%  Similarity=0.083  Sum_probs=93.2

Q ss_pred             CCeEEEEcCCcccCCC--hhchHHHH---HcCCHHHH----HHhhCchHHHHHHhCCCCHH---HHHHHHhhc-CCCC-C
Q 028576           56 LPILLFDIMDTIVRDP--FYHDVPAF---FGMSMKEL----IECKHPNAWIEFEMGMISEM---ELARKFFTD-GRPF-D  121 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~--~~~~l~~~---~g~~~~~~----~~~~~~~~w~~~e~G~Is~~---e~~~~~~~~-g~~~-~  121 (207)
                      +++|+||+||||+|..  +...+.++   +|......    +.......|..+..|-.+..   ++++.+... +.+. .
T Consensus         4 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   83 (235)
T 2om6_A            4 VKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVDVEL   83 (235)
T ss_dssp             CCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCCHHH
T ss_pred             ceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCCHHH
Confidence            6899999999999931  22223333   25443221    11111112443433323332   444444433 3321 1


Q ss_pred             HHHHHHHHHh---cCCcchhHHHHHHHHhHCCCeEEEEcCcH---HH-HHHHHHhCCcccccCeEEEccccCCCCCChHH
Q 028576          122 LEGLKICMKK---GYAYLDGVEELLHELKQSNYEMHAFTNYP---IW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       122 ~~~l~~~~~~---~~~~~pgv~elL~~Lk~~G~kl~IlTN~~---~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPei  194 (207)
                      ...+...+..   ...++||+.++|+.|+++|++++++||+.   .. ....++.+++.++|+.++++++++..||+|++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~  163 (235)
T 2om6_A           84 VKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEM  163 (235)
T ss_dssp             HHHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHH
T ss_pred             HHHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHH
Confidence            2222222221   12358999999999999999999999987   54 34467889999999999999999999999999


Q ss_pred             HHHhhhhh
Q 028576          195 ERGNLILI  202 (207)
Q Consensus       195 y~~~~~~~  202 (207)
                      |+.++...
T Consensus       164 ~~~~~~~l  171 (235)
T 2om6_A          164 FEKVLNSF  171 (235)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHc
Confidence            99988754

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.69  E-value=1e-16  Score=129.55  Aligned_cols=67  Identities=15%  Similarity=0.042  Sum_probs=52.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ++||+.++|+.|+++|++++|+||++. ....++.+++.++||.++++++++..||+|++|+.++...
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~l  159 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN-APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAML  159 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT-HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHH
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh-HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHc
Confidence            789999999999999999999999865 5556789999999999999999999999999999998764

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.68  E-value=6.1e-17  Score=126.99  Aligned_cols=69  Identities=13%  Similarity=-0.028  Sum_probs=62.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|+.|+++|++++++||.+......++.+++.++|+.++++++++..||+|++|+.++...
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  150 (190)
T 2fi1_A           82 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKY  150 (190)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCTHHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHT
T ss_pred             ccCcCHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHc
Confidence            478999999999999999999999987666667789999999999999999999999999999988653

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.67  E-value=1.3e-16  Score=127.67  Aligned_cols=141  Identities=15%  Similarity=0.089  Sum_probs=95.0

Q ss_pred             CCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCC
Q 028576           55 KLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYA  134 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~  134 (207)
                      ++++|+||+||||+|......+.+.++....  ...    .+.....|.++..+.+......-.....+.+... .....
T Consensus         3 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   75 (217)
T 3m1y_A            3 LQKLAVFDFDSTLVNAETIESLARAWGVFDE--VKT----ITLKAMNGETDFHKSLILRVSKLKNMPLKLAKEV-CESLP   75 (217)
T ss_dssp             CCEEEEEECBTTTBSSCHHHHHHHHTTCHHH--HTT----CCCC----CCCHHHHHHHHHHTTTTCBHHHHHHH-HTTCC
T ss_pred             CCcEEEEeCCCCCCCchhHHHHHHHcCchHH--HHH----HHHHHHcCcCCHHHHHHHHHHHhcCCCHHHHHHH-HhcCc
Confidence            4689999999999995444444444443111  111    1122334666655555554433212233444433 34467


Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEE----------EccccCCCCCChHHHHHhhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTF----------CSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~----------~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ++||+.++|+.|+++|++++++||++.. ....++.+++.++|+.++          .|++++..||+|++|+.++...
T Consensus        76 ~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~~  154 (217)
T 3m1y_A           76 LFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRLL  154 (217)
T ss_dssp             BCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHHc
Confidence            8999999999999999999999998754 445778899999999987          5667888999999999998754

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.67  E-value=2.6e-16  Score=126.47  Aligned_cols=143  Identities=15%  Similarity=0.132  Sum_probs=87.9

Q ss_pred             CCCCeEEEEcCCcccCCC--hhchHHHH---HcCC--HHHHHHhhCch-HHHHHHhCCCCHH----HHHHHHhhc-CCCC
Q 028576           54 RKLPILLFDIMDTIVRDP--FYHDVPAF---FGMS--MKELIECKHPN-AWIEFEMGMISEM----ELARKFFTD-GRPF  120 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~--~~~~l~~~---~g~~--~~~~~~~~~~~-~w~~~e~G~Is~~----e~~~~~~~~-g~~~  120 (207)
                      +++++|+||+||||+|..  +..++.++   .|..  .+++...+... .......+..+..    +.++.+.+. +.+.
T Consensus         4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (240)
T 3smv_A            4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEP   83 (240)
T ss_dssp             GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCC
T ss_pred             ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCC
Confidence            457899999999999931  22223332   2442  33332221100 0000001122222    223333333 5444


Q ss_pred             CHHHHHHHHH---hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHH
Q 028576          121 DLEGLKICMK---KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       121 ~~~~l~~~~~---~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                      ..+.. ..+.   ....++||+.++|+.|++ |++++++||++.. ....++.  +..+||.+++|++++..||+|++|+
T Consensus        84 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~~KP~~~~~~  159 (240)
T 3smv_A           84 DAAER-EEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGSYKPNPNNFT  159 (240)
T ss_dssp             CHHHH-HHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTSCTTSHHHHH
T ss_pred             CHHHH-HHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCCCCCCHHHHH
Confidence            43322 2222   335789999999999999 8999999998754 4445555  6689999999999999999999999


Q ss_pred             Hhhh
Q 028576          197 GNLI  200 (207)
Q Consensus       197 ~~~~  200 (207)
                      .+|.
T Consensus       160 ~~l~  163 (240)
T 3smv_A          160 YMID  163 (240)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9943

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.66  E-value=3.2e-15  Score=123.38  Aligned_cols=68  Identities=7%  Similarity=-0.061  Sum_probs=60.9

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+  |++++|+||++.. ....++.+++..+||.++++++++..||+|++|+.++...
T Consensus        92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  160 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVL  160 (253)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHc
Confidence            467899999999999  8999999999754 4557789999999999999999999999999999988654

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.66  E-value=4.2e-16  Score=125.14  Aligned_cols=71  Identities=23%  Similarity=0.268  Sum_probs=63.7

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ..++||+.++|+.|+++|++++++||+.. .....++.+++.++|+.++++++++..||+|++|+.++...=
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg  156 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLN  156 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHT
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhC
Confidence            46789999999999999999999999874 455677899999999999999999999999999999987643

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.65  E-value=7.2e-16  Score=122.87  Aligned_cols=69  Identities=7%  Similarity=0.038  Sum_probs=61.2

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++++||+ ......++.+++.++|+.++++++++..||+|++|+.++...
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l  158 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS-KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV  158 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC-TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc-HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence            356899999999999999999999998 444556788999999999999999999999999999988754

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.64  E-value=1.1e-15  Score=121.81  Aligned_cols=70  Identities=11%  Similarity=-0.014  Sum_probs=62.3

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+++ ++++++||++.. ....++.+++.++|+.++++++++..||+|++|+.++...
T Consensus        81 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~  151 (209)
T 2hdo_A           81 QIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKV  151 (209)
T ss_dssp             GCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHT
T ss_pred             cCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHc
Confidence            346789999999999999 999999998754 5557789999999999999999999999999999988754

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.64  E-value=2.5e-15  Score=120.94  Aligned_cols=147  Identities=17%  Similarity=0.083  Sum_probs=95.3

Q ss_pred             CCeEEEEcCCcccCCCh-----hchHHHHH---cCCHHHHHHhh---CchHHHHHHhCCCC-HH----HHHHHHhhc-CC
Q 028576           56 LPILLFDIMDTIVRDPF-----YHDVPAFF---GMSMKELIECK---HPNAWIEFEMGMIS-EM----ELARKFFTD-GR  118 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~-----~~~l~~~~---g~~~~~~~~~~---~~~~w~~~e~G~Is-~~----e~~~~~~~~-g~  118 (207)
                      +++|+||+||||+|..-     ...+.+.+   |.+.+.+...+   ....|..+..+... ..    +.++.+.+. +.
T Consensus         2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   81 (234)
T 3u26_A            2 IRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYGF   81 (234)
T ss_dssp             CCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHTC
T ss_pred             CcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHcCc
Confidence            57999999999999321     11233332   55544433221   12223333222222 11    233333332 32


Q ss_pred             CCC---HHHHHHHHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHH
Q 028576          119 PFD---LEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       119 ~~~---~~~l~~~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPei  194 (207)
                      ...   .+.....+.....++||+.++|+.|+++ ++++++||++.. ....++.+++.++|+.++++++++..||+|++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~  160 (234)
T 3u26_A           82 KYPENFWEISLRMSQRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRI  160 (234)
T ss_dssp             CCCTTHHHHHHHHHHHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHH
T ss_pred             hHHHHHHHHHHHHHHhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHH
Confidence            221   1111223444567899999999999999 999999999754 55577899999999999999999999999999


Q ss_pred             HHHhhhhhh
Q 028576          195 ERGNLILIF  203 (207)
Q Consensus       195 y~~~~~~~~  203 (207)
                      |+.++...-
T Consensus       161 ~~~~~~~~~  169 (234)
T 3u26_A          161 FELALKKAG  169 (234)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHcC
Confidence            999887643

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.64  E-value=3e-16  Score=124.95  Aligned_cols=68  Identities=13%  Similarity=0.052  Sum_probs=60.8

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      ...++||+.+ |+.|+++ ++++|+||++. .....++.+++.++|+.++++++++..||+|++|+.++..
T Consensus        72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~  140 (201)
T 2w43_A           72 NLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDS  140 (201)
T ss_dssp             TCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred             ccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHh
Confidence            3678899999 9999999 99999999974 4555778999999999999999999999999999998754

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.63  E-value=1.5e-15  Score=132.13  Aligned_cols=143  Identities=10%  Similarity=-0.008  Sum_probs=102.9

Q ss_pred             CCCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhc
Q 028576           53 KRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKG  132 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~  132 (207)
                      .++.++|+||+||||+|......+...+|.....      ...+..+..|.++..+.++..+........+.+ ..+...
T Consensus       105 ~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~------~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i-~~~~~~  177 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEGVDEIARELGMSTQI------TAITQQAMEGKLDFNASFTRRIGMLKGTPKAVL-NAVCDR  177 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHH------HHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHH-HHHHHT
T ss_pred             CCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHH------HHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHH-HHHHhC
Confidence            4677899999999999954333344444442211      123556678888887777766654222233333 334456


Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEE----------ccccCCCCCChHHHHHhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFC----------SCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~----------S~evg~~KPdPeiy~~~~~~  201 (207)
                      ..++||+.++|++|+++|++++|+||++.. ...+++.+|+..+|+.++.          +++++..||+|++|+.++..
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~  257 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAAR  257 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHH
Confidence            789999999999999999999999999755 4457789999999998765          55567789999999998764


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       258 l  258 (317)
T 4eze_A          258 L  258 (317)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.63  E-value=2.8e-15  Score=122.33  Aligned_cols=148  Identities=17%  Similarity=0.146  Sum_probs=94.7

Q ss_pred             CCCCCeEEEEcCCcccCC--ChhchHHHHH---cCC--HHHHHHh---hCchHHHHHHhCCC---CHHHH----HHHHhh
Q 028576           53 KRKLPILLFDIMDTIVRD--PFYHDVPAFF---GMS--MKELIEC---KHPNAWIEFEMGMI---SEMEL----ARKFFT  115 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~--~~~~~l~~~~---g~~--~~~~~~~---~~~~~w~~~e~G~I---s~~e~----~~~~~~  115 (207)
                      .|++++|+||+||||+|.  .+..++.+++   |..  .+++...   .....+..+..+..   ...+.    +..+++
T Consensus        19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (254)
T 3umc_A           19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAG   98 (254)
T ss_dssp             SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHH
Confidence            478899999999999983  1223343333   432  3333221   11222333333322   22222    233333


Q ss_pred             c-CCCCCHHHHHHHHH--hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCC
Q 028576          116 D-GRPFDLEGLKICMK--KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQ  191 (207)
Q Consensus       116 ~-g~~~~~~~l~~~~~--~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPd  191 (207)
                      . +...+.+.......  ....++||+.++|+.|+++ ++++++||++.. ...+++.+++.  ||.++++++++..||+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~~~kp~  175 (254)
T 3umc_A           99 EFGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGHYKPD  175 (254)
T ss_dssp             HTTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHTCCTTS
T ss_pred             HhCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccccCCCC
Confidence            3 54444443333222  3346789999999999985 999999998754 55567788874  9999999999999999


Q ss_pred             hHHHHHhhhhhh
Q 028576          192 CLKERGNLILIF  203 (207)
Q Consensus       192 Peiy~~~~~~~~  203 (207)
                      |++|+.++...=
T Consensus       176 ~~~~~~~~~~lg  187 (254)
T 3umc_A          176 PQVYLGACRLLD  187 (254)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcC
Confidence            999999987653

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.62  E-value=1.8e-15  Score=124.36  Aligned_cols=131  Identities=10%  Similarity=-0.029  Sum_probs=90.0

Q ss_pred             CCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCc
Q 028576           56 LPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAY  135 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~  135 (207)
                      +++|+||+||||+|.+....+...++...  +     ...+.++..|.++..+.++.++........+++.+.+.....+
T Consensus         6 ~k~viFD~DGTL~d~ds~~~~~~~~~~~~--~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (236)
T 2fea_A            6 KPFIICDFDGTITMNDNIINIMKTFAPPE--W-----MALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKI   78 (236)
T ss_dssp             CEEEEECCTTTTBSSCHHHHHHHHHSCTH--H-----HHHHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHHHHHHHCCB
T ss_pred             CcEEEEeCCCCCCccchHHHHHHHhchhh--H-----HHHHHHHHhCcCcHHHHHHHHHHhcCCChHHHHHHHHhcCCCC
Confidence            47999999999997433333333333211  0     1123445667788778887777541111245555443455788


Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCC--------CCCChH-HHH
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGM--------FSKQCL-KER  196 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~--------~KPdPe-iy~  196 (207)
                      +||+.++|+.|+++|++++|+||++.. ...+++  ++.++ |.+++++++..        .||+|+ +|+
T Consensus        79 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~  146 (236)
T 2fea_A           79 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSN  146 (236)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCS
T ss_pred             CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCcccccc
Confidence            999999999999999999999999765 444555  77676 99999988775        899999 453

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.61  E-value=2.1e-15  Score=122.69  Aligned_cols=70  Identities=19%  Similarity=0.145  Sum_probs=63.1

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||++. .....++.+++.++||.++++++++..||+|++|+.++...
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  179 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLC  179 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHH
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHc
Confidence            46889999999999999999999999864 45557789999999999999999999999999999998754

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.60  E-value=1.5e-15  Score=121.27  Aligned_cols=71  Identities=11%  Similarity=-0.020  Sum_probs=60.2

Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccccc--CeEEEccccCCCCCChHHHHHhhhhh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYL--SWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yF--D~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ....++||+.++|+.|+++|++++++||++.. ....++.+++.++|  +.+++++ .+..||+|++|+.++...
T Consensus        67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~-~~~~kp~~~~~~~~~~~~  140 (205)
T 3m9l_A           67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRD-EAPPKPHPGGLLKLAEAW  140 (205)
T ss_dssp             EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTT-TSCCTTSSHHHHHHHHHT
T ss_pred             hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCC-CCCCCCCHHHHHHHHHHc
Confidence            34467899999999999999999999998754 55577899999999  7777555 599999999999998754

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.59  E-value=8.9e-16  Score=124.52  Aligned_cols=66  Identities=11%  Similarity=-0.008  Sum_probs=55.1

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|++|+++|++++|+||++.....  +..+  .+||.++++++++..||+|++|+.++...
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~--~~~~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l  100 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALST--PLAA--PVNDWMIAAPRPTAGWPQPDACWMALMAL  100 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHH--HHHT--TTTTTCEECCCCSSCTTSTHHHHHHHHHT
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHH--HhcC--ccCCEEEECCcCCCCCCChHHHHHHHHHc
Confidence            368899999999999999999999998754332  1222  57899999999999999999999998654

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.59  E-value=2.8e-15  Score=121.29  Aligned_cols=139  Identities=12%  Similarity=0.044  Sum_probs=84.1

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCH--HHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHh
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSM--KELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKK  131 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~--~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~  131 (207)
                      +++++|+||+||||+|+.....+.+.+|...  .+.        +..+..|.++..+.+...+.. .....+.+.+.+..
T Consensus        12 ~~~k~viFD~DGTLvd~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   82 (225)
T 1nnl_A           12 YSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEM--------TRRAMGGAVPFKAALTERLAL-IQPSREQVQRLIAE   82 (225)
T ss_dssp             HHCSEEEEETBTTTBSSCHHHHHHHHTTCTTTC--------------------CHHHHHHHHHHH-HCCCHHHHHHHHHH
T ss_pred             hhCCEEEEeCcccccccccHHHHHHHhCCcHHHHHH--------HHHHHcCCccHHHHHHHHHHH-hcCCHHHHHHHHHh
Confidence            4578999999999999532222333334321  111        111222334444444433221 11233444444443


Q ss_pred             -cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcc--cccCeEE--------EccccCC----CCCChHHH
Q 028576          132 -GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIS--TYLSWTF--------CSCVIGM----FSKQCLKE  195 (207)
Q Consensus       132 -~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~--~yFD~v~--------~S~evg~----~KPdPeiy  195 (207)
                       ...++||+.++|+.|+++|++++|+||++.. ...+++++++.  ++|+.++        ++.+.+.    .||.|++|
T Consensus        83 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~  162 (225)
T 1nnl_A           83 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI  162 (225)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred             ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence             3578999999999999999999999999754 55577899997  4887663        5666553    46788899


Q ss_pred             HHhhhh
Q 028576          196 RGNLIL  201 (207)
Q Consensus       196 ~~~~~~  201 (207)
                      +.++..
T Consensus       163 ~~~~~~  168 (225)
T 1nnl_A          163 KLLKEK  168 (225)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887754

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.59  E-value=6e-15  Score=119.62  Aligned_cols=146  Identities=10%  Similarity=0.010  Sum_probs=92.6

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHH
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKIC  128 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~  128 (207)
                      +++++|+||+||||+|......+...+   +.  ....+. ......|..+..|.++.+++.+.+.......+.+++.+.
T Consensus         2 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (232)
T 3fvv_A            2 TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEAR-RRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAW   80 (232)
T ss_dssp             CCCEEEEECCBTTTBSSCHHHHHHHHHHHTTSSSSHHHHH-HHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred             CCCcEEEEeCCCCCcCCchHHHHHHHHHHcCCCCccHHHH-HHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCHHHHHHH
Confidence            456899999999999953323333332   22  122222 112345667788999988777665543112333444332


Q ss_pred             ----HHhcC--CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEcc----------ccCCCCCC
Q 028576          129 ----MKKGY--AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSC----------VIGMFSKQ  191 (207)
Q Consensus       129 ----~~~~~--~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~----------evg~~KPd  191 (207)
                          +....  .++||+.++|+.|+++|++++|+||++.. .+.+++.+|+.++|...+...          .....||.
T Consensus        81 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K  160 (232)
T 3fvv_A           81 HEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGK  160 (232)
T ss_dssp             HHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHH
T ss_pred             HHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHH
Confidence                22222  46899999999999999999999999865 445778999987776543321          22334666


Q ss_pred             hHHHHHhhh
Q 028576          192 CLKERGNLI  200 (207)
Q Consensus       192 Peiy~~~~~  200 (207)
                      ++.++.++.
T Consensus       161 ~~~~~~~~~  169 (232)
T 3fvv_A          161 VVRVNQWLA  169 (232)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            777766654

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.59  E-value=2.4e-15  Score=120.22  Aligned_cols=70  Identities=14%  Similarity=0.108  Sum_probs=62.8

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEcccc----CCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSCVI----GMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~ev----g~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|++|+++|++++|+||++    ......++.+|+..|||.+++|+++    +..||+|++|+.++...
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~  110 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL  110 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence            3688999999999999999999999986    3455678999999999999999998    89999999999998754

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.59  E-value=9.5e-15  Score=118.48  Aligned_cols=147  Identities=12%  Similarity=0.038  Sum_probs=94.6

Q ss_pred             CCCCeEEEEcCCcccCC--ChhchHHHHH---cC--CHHHHHHh-hC--chHHHHHHhCCCC---H----HHHHHHHhhc
Q 028576           54 RKLPILLFDIMDTIVRD--PFYHDVPAFF---GM--SMKELIEC-KH--PNAWIEFEMGMIS---E----MELARKFFTD  116 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~--~~~~~l~~~~---g~--~~~~~~~~-~~--~~~w~~~e~G~Is---~----~e~~~~~~~~  116 (207)
                      +++++|+||+||||+|.  .+..++.+++   |.  ..+++... ..  ...+..+..|...   .    .+.++.+.+.
T Consensus        13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (254)
T 3umg_A           13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRE   92 (254)
T ss_dssp             SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            46789999999999993  1223333333   33  23333221 11  1234444444322   1    2233334433


Q ss_pred             -CC---CCCHHHHHHHHH--hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCC
Q 028576          117 -GR---PFDLEGLKICMK--KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFS  189 (207)
Q Consensus       117 -g~---~~~~~~l~~~~~--~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~K  189 (207)
                       +.   ..+.+.......  ....++||+.++|+.|+++ ++++++||++.. ...+++.+++.  ||.+++|++++..|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~k  169 (254)
T 3umg_A           93 SGIDPTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINRKYK  169 (254)
T ss_dssp             TTCCGGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHTCCT
T ss_pred             hCCCcCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCCCCC
Confidence             44   334343333222  3457789999999999997 999999998754 44567888885  99999999999999


Q ss_pred             CChHHHHHhhhhhh
Q 028576          190 KQCLKERGNLILIF  203 (207)
Q Consensus       190 PdPeiy~~~~~~~~  203 (207)
                      |+|++|+.++...=
T Consensus       170 p~~~~~~~~~~~lg  183 (254)
T 3umg_A          170 PDPQAYLRTAQVLG  183 (254)
T ss_dssp             TSHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcC
Confidence            99999999987643

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.58  E-value=7.7e-15  Score=117.12  Aligned_cols=128  Identities=16%  Similarity=0.142  Sum_probs=83.2

Q ss_pred             CCeEEEEcCCcccCCChhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHH----HhhcCCCCCHHHHHHH
Q 028576           56 LPILLFDIMDTIVRDPFYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARK----FFTDGRPFDLEGLKIC  128 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~----~~~~g~~~~~~~l~~~  128 (207)
                      +++|+||+||||+|.    ++..++   |.+           .|.....+..+..++...    +.+.+  .+.+++.+.
T Consensus         2 ~k~viFD~DGTL~d~----~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~   64 (206)
T 1rku_A            2 MEIACLDLEGVLVPE----IWIAFAEKTGID-----------ALKATTRDIPDYDVLMKQRLRILDEHG--LKLGDIQEV   64 (206)
T ss_dssp             CEEEEEESBTTTBCC----HHHHHHHHHTCG-----------GGGCCTTTCCCHHHHHHHHHHHHHHTT--CCHHHHHHH
T ss_pred             CcEEEEccCCcchhh----HHHHHHHHcCCh-----------HHHHHhcCcCCHHHHHHHHHHHHHHCC--CCHHHHHHH
Confidence            579999999999992    233222   322           111111222222222221    22212  233444443


Q ss_pred             HHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccccc-CeEEEccccCC---CCCChHHHHHhhhhh
Q 028576          129 MKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYL-SWTFCSCVIGM---FSKQCLKERGNLILI  202 (207)
Q Consensus       129 ~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yF-D~v~~S~evg~---~KPdPeiy~~~~~~~  202 (207)
                      + ....++||+.++|+.|+++ ++++|+||++.. ...+++.+++..+| +.++++++...   .||+|++|..++...
T Consensus        65 ~-~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l  141 (206)
T 1rku_A           65 I-ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAF  141 (206)
T ss_dssp             H-TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHH
T ss_pred             H-HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHH
Confidence            3 4567899999999999999 999999999754 55577899999999 57777766642   259999999998654

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.58  E-value=7.4e-15  Score=116.83  Aligned_cols=71  Identities=4%  Similarity=-0.132  Sum_probs=62.0

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+++|++++++||.+. .....++.+++..+|+.++++++++..||+|++|+.++...
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~  158 (225)
T 3d6j_A           87 NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRL  158 (225)
T ss_dssp             GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHT
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHh
Confidence            345689999999999999999999999864 45556788999999999999999999999999999887654

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.57  E-value=1.1e-14  Score=117.09  Aligned_cols=67  Identities=15%  Similarity=0.187  Sum_probs=59.9

Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ....++||+.++|+.|+++ ++++++||++..    ++.+++.++||.+++|++++..||+|++|+.++...
T Consensus       102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  168 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRA  168 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHH
T ss_pred             ccCccCcCHHHHHHHHHhC-CeEEEEECCchh----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHh
Confidence            3456899999999999998 999999998754    477899999999999999999999999999998764

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.57  E-value=6e-15  Score=115.41  Aligned_cols=69  Identities=14%  Similarity=0.040  Sum_probs=61.0

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++++||+.. ... .++.+++.++|+.++++++++..||+|++|+.++...
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  153 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKY  153 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHh
Confidence            45789999999999999999999999864 455 6678899999999999999999999999999887654

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.57  E-value=8.6e-15  Score=123.49  Aligned_cols=64  Identities=8%  Similarity=0.087  Sum_probs=51.2

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHhC-----------CcccccCeEEEcccc-CCCCCChHHHHHhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDKL-----------KISTYLSWTFCSCVI-GMFSKQCLKERGNL  199 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~~-----------~l~~yFD~v~~S~ev-g~~KPdPeiy~~~~  199 (207)
                      ..++||+.++|++    |++++|+||++...+ .+++..           ++.++|+.+|.+ .+ | .||+|++|+.++
T Consensus       124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g-~KP~p~~~~~a~  197 (253)
T 2g80_A          124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSG-KKTETQSYANIL  197 (253)
T ss_dssp             BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHHC-CTTCHHHHHHHH
T ss_pred             CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-eccC-CCCCHHHHHHHH
Confidence            3678999999887    899999999986544 456655           588889988866 56 5 599999999998


Q ss_pred             hhh
Q 028576          200 ILI  202 (207)
Q Consensus       200 ~~~  202 (207)
                      ...
T Consensus       198 ~~l  200 (253)
T 2g80_A          198 RDI  200 (253)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            754

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.56  E-value=2.3e-14  Score=114.04  Aligned_cols=72  Identities=10%  Similarity=0.001  Sum_probs=63.3

Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ....++|++.++|+.|++.|++++++||.+.. ....++.+++..+|+.++++++++..||+|+.|+.++...
T Consensus        91 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~  163 (226)
T 1te2_A           91 ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKL  163 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHH
T ss_pred             ccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHc
Confidence            34577899999999999999999999998744 5557788999999999999999999999999999988754

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.56  E-value=7.3e-14  Score=116.93  Aligned_cols=71  Identities=13%  Similarity=-0.123  Sum_probs=61.3

Q ss_pred             CCcchhHHHHHHHHhHCCC--eEEEEcCcHHH-HHHHHHhCCcccccCeEEEcccc----CCCCCChHHHHHhhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNY--EMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVI----GMFSKQCLKERGNLILIF  203 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~--kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~ev----g~~KPdPeiy~~~~~~~~  203 (207)
                      ..++||+.++|+.|+++|+  +++|+||+... ....++.+++.++||.+++++++    +..||+|++|+.++...=
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg  218 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESG  218 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence            5679999999999999999  99999998754 55577889999999999988776    556999999999987643

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.56  E-value=6.7e-15  Score=118.43  Aligned_cols=70  Identities=14%  Similarity=0.007  Sum_probs=59.1

Q ss_pred             CCcchhHHHHHHHHhHC-CCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccC-CCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQS-NYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIG-MFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~-G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg-~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++ |++++|+||++.. ....++.+++.++|+.++++++++ ..||+|++|+.++...
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~l  164 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMT  164 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHHh
Confidence            35689999999999999 9999999998754 445778999999999988888875 4679999999887643

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.54  E-value=3.6e-14  Score=126.80  Aligned_cols=142  Identities=11%  Similarity=0.035  Sum_probs=98.8

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcC
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGY  133 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~  133 (207)
                      +.+++|+||+||||+|......+....|.... .     ...+..+.+|.++..+.++..+..-...+.+.+.. +....
T Consensus       183 ~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~-~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~  255 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQ-V-----AAITDAAMRGELDFAQSLQQRVATLAGLPATVIDE-VAGQL  255 (415)
T ss_dssp             TCCCEEEECTBTTTBSSCHHHHHHHHTTCHHH-H-----HHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHH-HHHHC
T ss_pred             cCCcEEEEcCcccCcCCchHHHHHHHcCCcHH-H-----HHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHH-HHHhC
Confidence            44689999999999995433334434444211 1     12355667788888887777665411222233333 33456


Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEE----------EccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTF----------CSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~----------~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|++|+++|++++|+||++.. ...+++.+|+..+|+..+          .++++...||+|++|+.++...
T Consensus       256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~  335 (415)
T 3p96_A          256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRA  335 (415)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHH
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHc
Confidence            89999999999999999999999998755 445778999988876432          3346777999999999988643

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.53  E-value=3.7e-14  Score=113.71  Aligned_cols=137  Identities=12%  Similarity=0.140  Sum_probs=88.7

Q ss_pred             CCCeEEEEcCCcccCCC--hhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCH---HHH
Q 028576           55 KLPILLFDIMDTIVRDP--FYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDL---EGL  125 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~--~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~---~~l  125 (207)
                      ++++|+||+||||+|..  +...+.+++   |...       ....+.....| .+..+.++.+.+. +...+.   ..+
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPI-------SVEEMGERFAG-MTWKNILLQVESEASIPLSASLLDKS   74 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCC-------CHHHHHHHHTT-CCHHHHHHHHHHHHCCCCCTHHHHHH
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCC-------CHHHHHHHHhC-CCHHHHHHHHHHHcCCCCCHHHHHHH
Confidence            46899999999999942  112222222   2211       00111111234 3445555555443 333221   122


Q ss_pred             HHH----HHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCccccc-CeEEEccccCCC--CCChHHHHH
Q 028576          126 KIC----MKKGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYL-SWTFCSCVIGMF--SKQCLKERG  197 (207)
Q Consensus       126 ~~~----~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yF-D~v~~S~evg~~--KPdPeiy~~  197 (207)
                      ...    +.....++||+.++|+.|+.   +++++||++. .....++.+++..+| +.++++++++..  ||+|++|+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~  151 (229)
T 2fdr_A           75 EKLLDMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLH  151 (229)
T ss_dssp             HHHHHHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHH
T ss_pred             HHHHHHHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHH
Confidence            222    22345788999999999874   8999999874 455577889999999 999999999999  999999999


Q ss_pred             hhhhh
Q 028576          198 NLILI  202 (207)
Q Consensus       198 ~~~~~  202 (207)
                      ++...
T Consensus       152 ~~~~l  156 (229)
T 2fdr_A          152 GAAQF  156 (229)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            88754

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.52  E-value=1.3e-13  Score=109.98  Aligned_cols=67  Identities=21%  Similarity=0.184  Sum_probs=57.2

Q ss_pred             cCCcchhHHHHHHHHhHCC-CeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSN-YEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G-~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ...++||+.++|+.|+++| ++++++||++.. ....++.+++.++|+.++++     .||+|++|+.++...=
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~-----~kpk~~~~~~~~~~lg  171 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM-----SDKTEKEYLRLLSILQ  171 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE-----SCCSHHHHHHHHHHHT
T ss_pred             cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec-----CCCCHHHHHHHHHHhC
Confidence            3467899999999999999 999999998754 45577889999999999865     5999999999987643

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.51  E-value=6.3e-14  Score=115.65  Aligned_cols=72  Identities=13%  Similarity=0.132  Sum_probs=61.6

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCccccc-CeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYL-SWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yF-D~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ...++||+.++|+.|+++|++++++||++. ....+++.+++..+| +.++++++++..||+|++|+.++...-
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg  174 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELG  174 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHT
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhC
Confidence            356789999999999999999999999874 455566777888886 999999999999999999999887543

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.51  E-value=2.1e-14  Score=120.52  Aligned_cols=139  Identities=15%  Similarity=0.011  Sum_probs=88.1

Q ss_pred             CCCCeEEEEcCCcccCCC--hhchHHHHH---c-CCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCC-HHHHH
Q 028576           54 RKLPILLFDIMDTIVRDP--FYHDVPAFF---G-MSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFD-LEGLK  126 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~--~~~~l~~~~---g-~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~-~~~l~  126 (207)
                      |++++|+||+||||+|+.  +..++.+++   | ...+++..         ...|. +..+..+.+........ .+.+.
T Consensus        33 m~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~~~~~~~~~---------~~~G~-~~~~~~~~~~~~~~~~~~~~~~~  102 (275)
T 2qlt_A           33 LKINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIH---------ISHGW-RTYDAIAKFAPDFADEEYVNKLE  102 (275)
T ss_dssp             EEESEEEECCBTTTEECHHHHHHHHHHHHTTCTTCCHHHHHH---------HCTTC-CHHHHHHHHCGGGCCHHHHHHHH
T ss_pred             ccCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCCCCHHHHHH---------HhcCC-CHHHHHHHHhccCCcHHHHHHHH
Confidence            457899999999999952  222333333   2 22222211         11232 22233333332211100 11111


Q ss_pred             H----HHHhcCCcchhHHHHHHHHhHC-CCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhh
Q 028576          127 I----CMKKGYAYLDGVEELLHELKQS-NYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLI  200 (207)
Q Consensus       127 ~----~~~~~~~~~pgv~elL~~Lk~~-G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~  200 (207)
                      .    .+.....++||+.++|+.|+++ |++++++||+.. .....++.+++. +|+.++++++++..||+|++|+.++.
T Consensus       103 ~~~~~~~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~  181 (275)
T 2qlt_A          103 GEIPEKYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRN  181 (275)
T ss_dssp             HTHHHHHCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHH
T ss_pred             HHHHHHHhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHH
Confidence            1    1223346789999999999999 999999999864 445566777875 59999999999999999999999886


Q ss_pred             hhh
Q 028576          201 LIF  203 (207)
Q Consensus       201 ~~~  203 (207)
                      ..=
T Consensus       182 ~lg  184 (275)
T 2qlt_A          182 GLG  184 (275)
T ss_dssp             HTT
T ss_pred             HcC
Confidence            543

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.47  E-value=3e-13  Score=110.96  Aligned_cols=65  Identities=14%  Similarity=0.093  Sum_probs=55.3

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|+.|+ +|++++++||++.. ....++.+++.++|+.++++     .||+|++|+.++...
T Consensus       110 ~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-----~kp~~~~~~~~~~~l  175 (251)
T 2pke_A          110 PVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV-----SEKDPQTYARVLSEF  175 (251)
T ss_dssp             CCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE-----SCCSHHHHHHHHHHH
T ss_pred             cCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee-----CCCCHHHHHHHHHHh
Confidence            3567899999999999 89999999998754 44567888999999999874     699999999988754

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.47  E-value=2.9e-14  Score=106.28  Aligned_cols=68  Identities=13%  Similarity=-0.009  Sum_probs=59.7

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ++||+.++|++|+++|++++|+||++. .....++.+++.++||.+++|++++..||+|++|+.++...
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~   87 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAI   87 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHT
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHc
Confidence            458899999999999999999999864 34556678899999999999999999999999999988654

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.46  E-value=3.6e-15  Score=122.32  Aligned_cols=66  Identities=6%  Similarity=-0.094  Sum_probs=51.0

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEcc---ccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSC---VIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~---evg~~KPdPeiy~~~~~~  201 (207)
                      .++||+.++|+.|+++|++++|+||++.. ...+++.  +.+||+.++.+.   +++..||+|++|+.++..
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~  157 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQD  157 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHH
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHH
Confidence            35789999999999999999999998643 2334444  667888774332   467799999999998754

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.42  E-value=1.6e-13  Score=111.93  Aligned_cols=138  Identities=10%  Similarity=0.006  Sum_probs=77.7

Q ss_pred             CCCeEEEEcCCcccCC-C-hhchHHHHH---cCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHH
Q 028576           55 KLPILLFDIMDTIVRD-P-FYHDVPAFF---GMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKIC  128 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~-~-~~~~l~~~~---g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~  128 (207)
                      .+++|+||+||||+|+ + +..++..++   |....+.........+.  ..|.....+.++.+... ..+...+.+...
T Consensus        10 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (231)
T 2p11_A           10 HDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRT--ELGYADYLGALQRYRLEQPRDTRLLLMSSF   87 (231)
T ss_dssp             CSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--HC-CCCHHHHHHHHHHHCTTCTGGGGGHHH
T ss_pred             CCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHH--hcCchHHHHHHHHHHhccccchHHHHHHHH
Confidence            4579999999999993 1 223344433   32211100000001111  12433333444433322 111111222222


Q ss_pred             HH---hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhh
Q 028576          129 MK---KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLI  200 (207)
Q Consensus       129 ~~---~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~  200 (207)
                      +.   ....++||+.++|+.|+++| +++|+||++.. ....++.+|+.+||+.++.   ++..|  |++++.++.
T Consensus        88 ~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~---~~~~K--~~~~~~~~~  157 (231)
T 2p11_A           88 LIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVL---IYIHK--ELMLDQVME  157 (231)
T ss_dssp             HHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEE---EESSG--GGCHHHHHH
T ss_pred             HHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEE---ecCCh--HHHHHHHHh
Confidence            22   23468899999999999999 99999999754 5557789999999998765   34455  566666553

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.42  E-value=6.5e-13  Score=104.27  Aligned_cols=68  Identities=12%  Similarity=-0.059  Sum_probs=55.8

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCcccccCeEEE-----ccccCCCCCC
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKISTYLSWTFC-----SCVIGMFSKQ  191 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~yFD~v~~-----S~evg~~KPd  191 (207)
                      ..++||+.++|++|+++|++++|+||++.                .....++.++  .+|+.++.     +++++..||+
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~  103 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPL  103 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTS
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCC
Confidence            36889999999999999999999999863                3344567777  56776663     6889999999


Q ss_pred             hHHHHHhhhhh
Q 028576          192 CLKERGNLILI  202 (207)
Q Consensus       192 Peiy~~~~~~~  202 (207)
                      |++|+.++...
T Consensus       104 ~~~~~~~~~~~  114 (179)
T 3l8h_A          104 PGMYRDIARRY  114 (179)
T ss_dssp             SHHHHHHHHHH
T ss_pred             HHHHHHHHHHc
Confidence            99999998754

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.38  E-value=7.6e-13  Score=103.71  Aligned_cols=136  Identities=12%  Similarity=0.031  Sum_probs=85.2

Q ss_pred             CCeEE-EEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCC
Q 028576           56 LPILL-FDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYA  134 (207)
Q Consensus        56 ~~~Il-FDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~  134 (207)
                      ++.|+ ||+||||+|......+.+.+|.  ...     ...+..+..|.++..+........-...+.+.+. .+.....
T Consensus         8 mk~ivifDlDGTL~d~~~~~~~~~~~g~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   79 (201)
T 4ap9_A            8 MKKVAVIDIEGTLTDFEFWREMARITGK--REI-----EELLEKGLSGEVEWLDSLLKRVGLIRGIDEGTFL-RTREKVN   79 (201)
T ss_dssp             GSCEEEEECBTTTBCCCHHHHHHHHHCC--HHH-----HHHHHHHHHTSSCHHHHHHHHHHHTTTCBHHHHH-HGGGGCC
T ss_pred             cceeEEecccCCCcchHHHHHHHHHhCh--HHH-----HHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHH-HHHHhCC
Confidence            44555 9999999996533333333454  111     1234455667777666665544321223333333 3335568


Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCC-CCCChHHHHHhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGM-FSKQCLKERGNLI  200 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~-~KPdPeiy~~~~~  200 (207)
                      ++||+.++|+.|+++|++++|+||++.. ...+ +.+++..+|+.+++++++.. .||.|.....++.
T Consensus        80 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~  146 (201)
T 4ap9_A           80 VSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLK  146 (201)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHG
T ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHH
Confidence            8999999999999999999999998754 4446 88899888777665554322 4666654444443

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.34  E-value=2.7e-12  Score=104.36  Aligned_cols=67  Identities=16%  Similarity=0.206  Sum_probs=56.2

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH----------------HHHHHHHHhCCcccccCeEEEc------------ccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP----------------IWYEIIEDKLKISTYLSWTFCS------------CVI  185 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~----------------~~~~~il~~~~l~~yFD~v~~S------------~ev  185 (207)
                      .++||+.++|++|+++|++++|+||++                ..+...++.+++.  |+.++.+            +++
T Consensus        50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~~  127 (211)
T 2gmw_A           50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQVC  127 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSCC
T ss_pred             cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCccC
Confidence            578999999999999999999999987                2344567888986  8887754            458


Q ss_pred             CCCCCChHHHHHhhhhh
Q 028576          186 GMFSKQCLKERGNLILI  202 (207)
Q Consensus       186 g~~KPdPeiy~~~~~~~  202 (207)
                      +..||+|++|+.++...
T Consensus       128 ~~~KP~p~~~~~~~~~l  144 (211)
T 2gmw_A          128 DCRKPHPGMLLSARDYL  144 (211)
T ss_dssp             SSSTTSCHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHc
Confidence            89999999999998654

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.33  E-value=2.8e-12  Score=111.10  Aligned_cols=142  Identities=9%  Similarity=0.044  Sum_probs=94.2

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcC
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGY  133 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~  133 (207)
                      ...++|+||+||||+|......+.+.+|.... . .    .....+..|.++..+.++.....-...+ ++....+....
T Consensus       105 ~~~~~viFD~DgTLi~~~~~~~~~~~~g~~~~-~-~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~  177 (335)
T 3n28_A          105 TKPGLIVLDMDSTAIQIECIDEIAKLAGVGEE-V-A----EVTERAMQGELDFEQSLRLRVSKLKDAP-EQILSQVRETL  177 (335)
T ss_dssp             TSCCEEEECSSCHHHHHHHHHHHHHHHTCHHH-H-H----HHHHHHHTTSSCHHHHHHHHHHTTTTCB-TTHHHHHHTTC
T ss_pred             cCCCEEEEcCCCCCcChHHHHHHHHHcCCchH-H-H----HHHHHHhcCCCCHHHHHHHHHHHhcCCC-HHHHHHHHHhC
Confidence            34479999999999982111222222333211 1 0    1233455677887776665554311111 12233444556


Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEE----------EccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTF----------CSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~----------~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|+.|+++|++++++||+... .+.+++.+++..+|+..+          .+++++..||+|++|+.++...
T Consensus       178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~l  257 (335)
T 3n28_A          178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQY  257 (335)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHH
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHc
Confidence            78999999999999999999999998754 445778899988887543          4567888999999999988654

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.33  E-value=1.1e-12  Score=117.85  Aligned_cols=66  Identities=15%  Similarity=-0.007  Sum_probs=57.1

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH---------HH----HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP---------IW----YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~---------~~----~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      ++||+.++|+.|+++||+++|+||.+         ..    ...+++.+|+  +||.++++++++..||+|++|+.++..
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl--~fd~i~~~~~~~~~KP~p~~~~~a~~~  165 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV--PFQVLVATHAGLNRKPVSGMWDHLQEQ  165 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS--CCEEEEECSSSTTSTTSSHHHHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC--CEEEEEECCCCCCCCCCHHHHHHHHHH
Confidence            78999999999999999999999954         22    3446778888  499999999999999999999999875


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       166 l  166 (416)
T 3zvl_A          166 A  166 (416)
T ss_dssp             S
T ss_pred             h
Confidence            3

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.30  E-value=1.9e-11  Score=96.56  Aligned_cols=142  Identities=17%  Similarity=0.117  Sum_probs=80.8

Q ss_pred             CCeEEEEcCCcccCCCh-hchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhc--
Q 028576           56 LPILLFDIMDTIVRDPF-YHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKG--  132 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~-~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~--  132 (207)
                      +++|+||+||||+|... ......++....... ... .........|.+...+.+...+.. .....+.+.......  
T Consensus         4 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   80 (219)
T 3kd3_A            4 MKNIIFDFDSTLIKKESLELILEPILQKSPAKL-KEI-EYITNLGMQGDISFRDSLQKRLAI-ASPTKQSIKEFSNKYCP   80 (219)
T ss_dssp             CEEEEECCCCCCBSSCHHHHHHTTTTTTCHHHH-HHH-HHHHHHHHTTSSCHHHHHHHHHHH-CCCBHHHHHHHHHHHTT
T ss_pred             ceEEEEeCCCCCcCcccHHHHHHHHHhcccchH-HHH-HHHHHHHhcCcccHHHHHHHHHhh-ccCCHHHHHHHHHhhcc
Confidence            68999999999999431 111111111111110 000 001112234555555544433322 111234443333322  


Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCc--ccccCe-EEEc-cc----cCCCCCChHHHHHhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKI--STYLSW-TFCS-CV----IGMFSKQCLKERGNLI  200 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l--~~yFD~-v~~S-~e----vg~~KPdPeiy~~~~~  200 (207)
                      ..++||+.++|+.|+++|++++|+||++.. ....++.+++  ..+|+. ++.+ +.    +...||+|+.+..+|.
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  157 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFD  157 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHH
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHH
Confidence            357899999999999999999999998754 4456788888  456653 3332 22    3668999988777664

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.30  E-value=4.4e-11  Score=94.25  Aligned_cols=140  Identities=16%  Similarity=0.117  Sum_probs=80.8

Q ss_pred             CCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCC
Q 028576           55 KLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYA  134 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~  134 (207)
                      ++++|+|||||||+|+.-...+.+.+|.... +.     ..+.....|..+..+.+................+.+ ....
T Consensus         4 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   76 (211)
T 1l7m_A            4 KKKLILFDFDSTLVNNETIDEIAREAGVEEE-VK-----KITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAI-KRIT   76 (211)
T ss_dssp             CCEEEEEECCCCCBSSCHHHHHHHHTTCHHH-HH-----HHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHH-HTCC
T ss_pred             CCcEEEEeCCCCCCCccHHHHHHHHhCcHHH-HH-----HHHHHHHcCCCCHHHHHHHHHHHhcCCCHHHHHHHH-HhCC
Confidence            5689999999999996322233333333211 10     112233345444433333222211111223233333 3456


Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccc----------cCCCCCChHHHHHhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCV----------IGMFSKQCLKERGNLIL  201 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~e----------vg~~KPdPeiy~~~~~~  201 (207)
                      +.|++.++|+.|+++|++++++||.+.. ....++.+++..+|+.++...+          ....+|.|+.++.++..
T Consensus        77 l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  154 (211)
T 1l7m_A           77 PTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI  154 (211)
T ss_dssp             BCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHH
Confidence            7799999999999999999999998644 4446677788777875543322          12345667888877654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.20  E-value=4.4e-12  Score=100.87  Aligned_cols=65  Identities=11%  Similarity=-0.035  Sum_probs=54.6

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcH-H-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYP-I-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~-~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|+.|+++|++++|+||.+ . ....+++.+++..+||.+++++     +|+|++|+.++...
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~  133 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP-----GSKITHFERLQQKT  133 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS-----SCHHHHHHHHHHHH
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe-----CchHHHHHHHHHHc
Confidence            3578999999999999999999999986 3 4556788999999999886543     68899999887643

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.12  E-value=6.1e-12  Score=104.31  Aligned_cols=67  Identities=6%  Similarity=-0.109  Sum_probs=53.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHH---HH-HHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWY---EI-IEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~---~~-il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++||+.++|+.|+ +|+++ |+||+....   .. +.+..++..+|+.++++++++..||+|++|+.++...
T Consensus       126 ~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~  196 (264)
T 1yv9_A          126 LSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHL  196 (264)
T ss_dssp             CCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc
Confidence            46899999999997 89998 999986422   11 1233357789999999999999999999999998754

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.08  E-value=3.5e-12  Score=102.77  Aligned_cols=70  Identities=16%  Similarity=0.018  Sum_probs=54.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEE---------------------------------EEcCcHHHHHHHHHhCC-cccccCeE
Q 028576          134 AYLDGVEELLHELKQSNYEMH---------------------------------AFTNYPIWYEIIEDKLK-ISTYLSWT  179 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~---------------------------------IlTN~~~~~~~il~~~~-l~~yFD~v  179 (207)
                      .+++|+.++++.|++.|++++                                 ++||.+......++.++ +..+|+.+
T Consensus        87 ~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~  166 (250)
T 2c4n_A           87 AYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKI  166 (250)
T ss_dssp             EEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCCSBSSTTCBCHHHHHHHHHHH
T ss_pred             EEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCeeecchHHHHHHHHH
Confidence            467999999999999999999                                 99997611112223344 66778888


Q ss_pred             EEccccCCCCCChHHHHHhhhhhh
Q 028576          180 FCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       180 ~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ++++.++..||+|++|+.++...=
T Consensus       167 ~~~~~~~~~kpk~~~~~~~~~~lg  190 (250)
T 2c4n_A          167 SGRKPFYVGKPSPWIIRAALNKMQ  190 (250)
T ss_dssp             HCCCCEECSTTSTHHHHHHHHHHT
T ss_pred             hCCCceEeCCCCHHHHHHHHHHcC
Confidence            888889999999999999987543

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.08  E-value=4.1e-11  Score=95.96  Aligned_cols=45  Identities=18%  Similarity=0.110  Sum_probs=36.5

Q ss_pred             CCcchhHHHHHHHHhHC-CCeEEEEcCcHHH-HHHHHHhCCccc-ccC
Q 028576          133 YAYLDGVEELLHELKQS-NYEMHAFTNYPIW-YEIIEDKLKIST-YLS  177 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~-G~kl~IlTN~~~~-~~~il~~~~l~~-yFD  177 (207)
                      ..++||+.++|+.|+++ |++++|+||++.. ....++++++.+ ||+
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~  121 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG  121 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch
Confidence            46889999999999999 9999999998743 334556777777 776

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.08  E-value=2.1e-12  Score=107.04  Aligned_cols=62  Identities=11%  Similarity=0.059  Sum_probs=55.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHH
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKE  195 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy  195 (207)
                      .++||+.++|+.|+++|++++++||.+.. ...+++.+++.+||+.++.++.+...||.|+.|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k~~~~k~~~~~~  206 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEKAEKVKEVQQKY  206 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGHHHHHHHHHTTS
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHHHHHHHHHHhcC
Confidence            56799999999999999999999998754 555778999999999999999999999999876

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.06  E-value=1.7e-10  Score=90.76  Aligned_cols=52  Identities=13%  Similarity=0.248  Sum_probs=39.7

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCc---HHHH---HHHH-HhCCcccccCeEEEccc
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNY---PIWY---EIIE-DKLKISTYLSWTFCSCV  184 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~---~~~~---~~il-~~~~l~~yFD~v~~S~e  184 (207)
                      ...++||+.++|+.|+++ ++++|+||+   +...   ...+ +.++...+|+.++++++
T Consensus        67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~  125 (180)
T 3bwv_A           67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK  125 (180)
T ss_dssp             SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG
T ss_pred             cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc
Confidence            357899999999999985 999999998   3211   2223 44777788888888776

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.05  E-value=3.9e-11  Score=98.33  Aligned_cols=67  Identities=4%  Similarity=-0.163  Sum_probs=54.7

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccC---eEEEccccCCCCCChHHHHHhhhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLS---WTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD---~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ++|++.++|+.|+ +|+++ ++||.... ....+...++.++|+   .++++++++..||+|++|+.++...-
T Consensus       123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lg  193 (259)
T 2ho4_A          123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDAD  193 (259)
T ss_dssp             BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGT
T ss_pred             CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcC
Confidence            6799999999999 89999 99998633 222335678888887   77889999999999999999987653

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.01  E-value=2.8e-10  Score=90.17  Aligned_cols=67  Identities=16%  Similarity=0.089  Sum_probs=56.1

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCc---------------HH-HHHHHHHhCCcccccCeEEEc-----cccCCCCCCh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNY---------------PI-WYEIIEDKLKISTYLSWTFCS-----CVIGMFSKQC  192 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~---------------~~-~~~~il~~~~l~~yFD~v~~S-----~evg~~KPdP  192 (207)
                      .++||+.++|++|+++|++++|+||+               +. ....+++.+++.  ||.++.|     ++++..||+|
T Consensus        42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~p  119 (176)
T 2fpr_A           42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPKV  119 (176)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTSC
T ss_pred             cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCCH
Confidence            58899999999999999999999998               43 345577888986  9999876     8999999999


Q ss_pred             HHHHHhhhhh
Q 028576          193 LKERGNLILI  202 (207)
Q Consensus       193 eiy~~~~~~~  202 (207)
                      ++|+.++...
T Consensus       120 ~~~~~~~~~~  129 (176)
T 2fpr_A          120 KLVERYLAEQ  129 (176)
T ss_dssp             GGGGGGC---
T ss_pred             HHHHHHHHHc
Confidence            9999987643

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.99  E-value=8.6e-10  Score=93.27  Aligned_cols=60  Identities=10%  Similarity=-0.062  Sum_probs=46.2

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH----HHHHHHHhCCcc--cccCeEEEccccCCCCCChHH
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI----WYEIIEDKLKIS--TYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~----~~~~il~~~~l~--~yFD~v~~S~evg~~KPdPei  194 (207)
                      ..++||+.++|+.|+++|++++|+||.+.    .....++.+|+.  .+|+.+++.+++  .||+|..
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K~~~~~  165 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KGKEKRR  165 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CSSHHHH
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CCcHHHH
Confidence            36789999999999999999999999862    233456788887  677877766643  5777643

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.98  E-value=1.2e-10  Score=92.84  Aligned_cols=48  Identities=8%  Similarity=0.108  Sum_probs=38.2

Q ss_pred             CCcchhHHHHHHHHhHC-CCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEcc
Q 028576          133 YAYLDGVEELLHELKQS-NYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~-G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~  183 (207)
                      ..++||+.++|+.|+++ |++++|+||++.. ....++++++   ||.+++++
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~~  121 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGPQ  121 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCHH
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCHH
Confidence            46789999999999999 9999999998643 4445666676   78777653

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.97  E-value=3e-10  Score=87.77  Aligned_cols=59  Identities=5%  Similarity=-0.209  Sum_probs=47.0

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +.|+..++|+.|+++|++++|+||.+ .....+++++++..+|+.         .||+|++|+.++...
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~---------~kp~~~~~~~~~~~~   96 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG---------SYKKLEIYEKIKEKY   96 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC---------C--CHHHHHHHHHHT
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC---------CCCCHHHHHHHHHHc
Confidence            34677899999999999999999987 445667789999887764         799999999887653

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=98.96  E-value=4.5e-10  Score=100.34  Aligned_cols=68  Identities=18%  Similarity=0.164  Sum_probs=60.2

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccC--eEEEccccC-----------CCCCChHHHHHhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLS--WTFCSCVIG-----------MFSKQCLKERGNL  199 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD--~v~~S~evg-----------~~KPdPeiy~~~~  199 (207)
                      .++||+.++|+.|+++|++++|+||++. .....++.+|+.+|||  .++++++++           ..||+|++|+.++
T Consensus       215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a~  294 (384)
T 1qyi_A          215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL  294 (384)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred             CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHHH
Confidence            5689999999999999999999999975 4555778899999999  899999886           4999999999987


Q ss_pred             hh
Q 028576          200 IL  201 (207)
Q Consensus       200 ~~  201 (207)
                      ..
T Consensus       295 ~~  296 (384)
T 1qyi_A          295 YG  296 (384)
T ss_dssp             HC
T ss_pred             HH
Confidence            64

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.94  E-value=4.4e-10  Score=86.99  Aligned_cols=52  Identities=8%  Similarity=-0.082  Sum_probs=44.2

Q ss_pred             HHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +|+.|+++|++++++||.+ .....+++++++..+|+.+         ||+|++|+.++...
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~---------kpk~~~~~~~~~~~   91 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV---------VDKLSAAEELCNEL   91 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC---------SCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc---------CChHHHHHHHHHHc
Confidence            7899999999999999987 4455678899998888763         99999999988654

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.89  E-value=3.2e-11  Score=101.44  Aligned_cols=65  Identities=8%  Similarity=-0.032  Sum_probs=52.9

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcHHHHH--H--H-HHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYPIWYE--I--I-EDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~~~~~--~--i-l~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +...++++.|+++|++ +|+||+.....  .  . ++..++.++||.++++++++..||+|++|+.++...
T Consensus       148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l  217 (284)
T 2hx1_A          148 HDLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDML  217 (284)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHH
T ss_pred             ccHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHH
Confidence            4667777799999999 99999864322  2  2 245678899999999999999999999999998765

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=98.89  E-value=1.5e-10  Score=96.59  Aligned_cols=66  Identities=9%  Similarity=-0.218  Sum_probs=54.1

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHH---HHHHh-CCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYE---IIEDK-LKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~---~il~~-~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .++|++.++|+.|+ +|+++ |+||+.....   ..+.. .++.++|+.++++++++..||+|++|+.++..
T Consensus       130 ~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~  199 (263)
T 1zjj_A          130 LTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM  199 (263)
T ss_dssp             CBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh
Confidence            46899999999999 89998 9999864322   22233 46778999999999999999999999999875

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.88  E-value=8.1e-10  Score=87.44  Aligned_cols=51  Identities=18%  Similarity=0.048  Sum_probs=40.7

Q ss_pred             HHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +|++|+++|++++|+||++. ....+++.+++. +|+.         .||+|++++.++...
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~~---------~~~k~~~l~~~~~~~   98 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLHG---------IDRKDLALKQWCEEQ   98 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEES---------CSCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEeC---------CCChHHHHHHHHHHc
Confidence            88999999999999999874 455677888886 4332         299999999887653

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.87  E-value=6.9e-10  Score=91.03  Aligned_cols=51  Identities=16%  Similarity=0.055  Sum_probs=43.6

Q ss_pred             HHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      +|+.|+++|++++|+||++. ....+++.+++..+|+.+         ||+|++++.++..
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~---------k~K~~~l~~~~~~  135 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ---------SDKLVAYHELLAT  135 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC---------SSHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc---------CChHHHHHHHHHH
Confidence            89999999999999999874 455678899998888754         8999999988765

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.86  E-value=4.3e-10  Score=91.17  Aligned_cols=52  Identities=13%  Similarity=-0.039  Sum_probs=42.8

Q ss_pred             HHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .|+.|+++|++++|+||.+. ....+++.+|+..+|+.+         ||+|+.++.++...
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~---------k~k~~~~~~~~~~~  112 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ---------DDKVQAYYDICQKL  112 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC---------SSHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC---------CCcHHHHHHHHHHh
Confidence            48899999999999999874 455678999998877643         99999999887643

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.82  E-value=1.6e-09  Score=86.64  Aligned_cols=51  Identities=12%  Similarity=-0.042  Sum_probs=42.6

Q ss_pred             HHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      +|++|+++|++++|+||.+. ....+++++|+.++|+.+         +|.|++++.++..
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~---------~~K~~~~~~~~~~  105 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR---------EDKLVVLDKLLAE  105 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC---------SCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc---------CChHHHHHHHHHH
Confidence            88999999999999999874 455678899998888865         6667999888764

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.80  E-value=2.4e-09  Score=84.71  Aligned_cols=57  Identities=5%  Similarity=-0.156  Sum_probs=45.7

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .+...++|++|+++|++++++||.+ .....+++.+++..+|+.         .||+|++|+.++..
T Consensus        37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~---------~k~k~~~~~~~~~~   94 (180)
T 1k1e_A           37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG---------KLEKETACFDLMKQ   94 (180)
T ss_dssp             EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES---------CSCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC---------CCCcHHHHHHHHHH
Confidence            3455689999999999999999987 445567788898877743         59999999988754

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.73  E-value=6.5e-10  Score=94.71  Aligned_cols=68  Identities=6%  Similarity=-0.097  Sum_probs=55.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHH----HHHHhCC-cccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYE----IIEDKLK-ISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~----~il~~~~-l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .++|++.++|+.|+++|+ ++++||......    ..+...| +..+|+.++++++++..||+|++|+.++...
T Consensus       156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~l  228 (306)
T 2oyc_A          156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENF  228 (306)
T ss_dssp             CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHc
Confidence            457999999999999998 999999864322    2223445 7789999999999999999999999998754

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.72  E-value=4.6e-09  Score=84.27  Aligned_cols=52  Identities=12%  Similarity=-0.012  Sum_probs=43.6

Q ss_pred             HHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      .|++|+++|++++|+||.+. ....+++.+++..+|+.+         ||+|++|+.++...
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~---------kpk~~~~~~~~~~~  106 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ---------VDKRSAYQHLKKTL  106 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC---------SSCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC---------CChHHHHHHHHHHh
Confidence            58899999999999999874 455677889998888765         99999999988643

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.68  E-value=3.3e-09  Score=89.84  Aligned_cols=48  Identities=15%  Similarity=0.158  Sum_probs=41.3

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEE
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTF  180 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~  180 (207)
                      ..++||+.++|+.|+++|++++|+||++.. .+.+++.+|+.++|+.++
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~  210 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL  210 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC
Confidence            367899999999999999999999999754 555778899999998764

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.68  E-value=3.6e-08  Score=79.85  Aligned_cols=67  Identities=4%  Similarity=-0.192  Sum_probs=55.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCcccccCeEEEc------------ccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKISTYLSWTFCS------------CVI  185 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~yFD~v~~S------------~ev  185 (207)
                      .++||+.++|++|+++|++++|+||.+.                .....++.+++.  |+.++.+            +++
T Consensus        56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~~  133 (218)
T 2o2x_A           56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPDH  133 (218)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSSC
T ss_pred             eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccCC
Confidence            5789999999999999999999999875                345567888874  7765544            678


Q ss_pred             CCCCCChHHHHHhhhhh
Q 028576          186 GMFSKQCLKERGNLILI  202 (207)
Q Consensus       186 g~~KPdPeiy~~~~~~~  202 (207)
                      +..||+|++|+.++...
T Consensus       134 ~~~KP~~~~~~~~~~~~  150 (218)
T 2o2x_A          134 PMRKPNPGMLVEAGKRL  150 (218)
T ss_dssp             TTSTTSCHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHc
Confidence            89999999999998654

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.65  E-value=4.8e-08  Score=83.03  Aligned_cols=62  Identities=10%  Similarity=-0.097  Sum_probs=44.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-----HHHHHHHhCCcccccC-eEEEccccCCCCCChHHHHHhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-----WYEIIEDKLKISTYLS-WTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-----~~~~il~~~~l~~yFD-~v~~S~evg~~KPdPeiy~~~~  199 (207)
                      .++||+.++|+.|+++|++++++||.+.     .....++.+|+..+++ .++....    +|+++.-+..|
T Consensus       101 ~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----~~~K~~~r~~l  168 (262)
T 3ocu_A          101 RAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD----KSAKAARFAEI  168 (262)
T ss_dssp             EECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS----CSCCHHHHHHH
T ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC----CCChHHHHHHH
Confidence            5889999999999999999999999863     2333568889966664 6666543    34444444443

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=98.62  E-value=2.8e-09  Score=88.37  Aligned_cols=68  Identities=9%  Similarity=-0.207  Sum_probs=52.4

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHHH----HHHhCCcccccCeEEEccc-cCCCCCChHHHHHhhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEI----IEDKLKISTYLSWTFCSCV-IGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~----il~~~~l~~yFD~v~~S~e-vg~~KPdPeiy~~~~~~~~  203 (207)
                      .+++++.++++.| ++|+++ ++||.......    ..+..++..+|+.++++++ ++..||+|++|+.++...=
T Consensus       137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg  209 (271)
T 1vjr_A          137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFG  209 (271)
T ss_dssp             CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhC
Confidence            4579999999999 789998 99997532111    1223357788998888888 9999999999999987543

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.61  E-value=6.5e-08  Score=76.94  Aligned_cols=51  Identities=16%  Similarity=-0.056  Sum_probs=41.9

Q ss_pred             HHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      +|++|+++|++++|+||.+ .....+++.+++..+|+.         .||+|++|+.++..
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~---------~kpk~~~~~~~~~~  112 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG---------QSNKLIAFSDLLEK  112 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS---------CSCSHHHHHHHHHH
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC---------CCCCHHHHHHHHHH
Confidence            7899999999999999986 445557788888777653         59999999998764

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.61  E-value=1.1e-07  Score=80.68  Aligned_cols=63  Identities=10%  Similarity=-0.122  Sum_probs=46.8

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-----HHHHHHHhCCcccccC-eEEEccccCCCCCChHHHHHhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-----WYEIIEDKLKISTYLS-WTFCSCVIGMFSKQCLKERGNLI  200 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-----~~~~il~~~~l~~yFD-~v~~S~evg~~KPdPeiy~~~~~  200 (207)
                      .++||+.++|+.|+++|++++++||.+.     .....++.+|+..+++ .++....    +++++..+..|.
T Consensus       101 ~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~  169 (260)
T 3pct_A          101 AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD----KSNKSVRFKQVE  169 (260)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS----CSSSHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC----CCChHHHHHHHH
Confidence            5889999999999999999999999863     2334568889977675 6665542    455666665543

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.60  E-value=6.9e-08  Score=81.05  Aligned_cols=69  Identities=16%  Similarity=0.070  Sum_probs=55.8

Q ss_pred             CcchhHHHHHHHHhHC-CCeEEEEcCc---------------------H-HHHHHHHHhCCcccccCeE----------E
Q 028576          134 AYLDGVEELLHELKQS-NYEMHAFTNY---------------------P-IWYEIIEDKLKISTYLSWT----------F  180 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~-G~kl~IlTN~---------------------~-~~~~~il~~~~l~~yFD~v----------~  180 (207)
                      ...+++.++++.|+++ |+++++.|+.                     . ..+..+++..++..+|+.+          +
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            5679999999999998 9999999986                     3 2344566788888888765          6


Q ss_pred             EccccCCCCCChHHHHHhhhhh
Q 028576          181 CSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       181 ~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +.+.++..||+++.++.++...
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~  223 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKY  223 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCHHHHHHHHHHHc
Confidence            7778889999999999887653

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=98.54  E-value=8.2e-08  Score=81.28  Aligned_cols=66  Identities=9%  Similarity=-0.173  Sum_probs=54.5

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH----HHHHHHh--------CCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW----YEIIEDK--------LKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~----~~~il~~--------~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .++||+.++|+.|+++|++++++||++..    ....+++        +++  +|+.++++++. ..||+|++++.++..
T Consensus       188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~~  264 (301)
T 1ltq_A          188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFWK  264 (301)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHHH
Confidence            56899999999999999999999999732    2344566        888  59999988776 579999999998765


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       265 ~  265 (301)
T 1ltq_A          265 H  265 (301)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=98.37  E-value=5.9e-08  Score=79.14  Aligned_cols=67  Identities=9%  Similarity=-0.027  Sum_probs=44.3

Q ss_pred             chhHHHHHHHHhHC-CCeEEEEcCcHHHH-HHHHHhCCcccccC---eEEEccccCCCCCChHHHHHhhhhhh
Q 028576          136 LDGVEELLHELKQS-NYEMHAFTNYPIWY-EIIEDKLKISTYLS---WTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       136 ~pgv~elL~~Lk~~-G~kl~IlTN~~~~~-~~il~~~~l~~yFD---~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ++++.++++.|+++ |+++ ++||..... .......++..+|+   ..++++.++..||+|++|+.++...=
T Consensus       133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg  204 (271)
T 2x4d_A          133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIG  204 (271)
T ss_dssp             HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhC
Confidence            56788888888887 8888 777754211 11112334444443   44556778899999999999887643

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=97.72  E-value=4.7e-08  Score=82.03  Aligned_cols=47  Identities=15%  Similarity=0.150  Sum_probs=41.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEE
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTF  180 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~  180 (207)
                      .++||+.++|++|+++|++++++||.+.. .+.+++++|+.+||+.++
T Consensus       136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~  183 (263)
T 2yj3_A          136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS  183 (263)
Confidence            57899999999999999999999998754 455778999999999876

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.35  E-value=8.6e-07  Score=73.18  Aligned_cols=49  Identities=8%  Similarity=-0.101  Sum_probs=37.9

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCc---H-HHHHHHHHhCCcccccCeEEEcc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNY---P-IWYEIIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~---~-~~~~~il~~~~l~~yFD~v~~S~  183 (207)
                      ..|++.+.|++|+++|+++.++||.   + ..+...++.+|+....+.++++.
T Consensus        25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~   77 (268)
T 3qgm_A           25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVAT   77 (268)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHH
T ss_pred             eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHH
Confidence            4578889999999999999999993   2 34555667888876667777764

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.14  E-value=2.2e-05  Score=67.46  Aligned_cols=121  Identities=10%  Similarity=0.046  Sum_probs=58.7

Q ss_pred             ccccccCCCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHH---HHHHh--CCC--CHHHHHHHHh-hcCC
Q 028576           47 SGKENEKRKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAW---IEFEM--GMI--SEMELARKFF-TDGR  118 (207)
Q Consensus        47 ~~~~~~~~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w---~~~e~--G~I--s~~e~~~~~~-~~g~  118 (207)
                      |+.....+.+++|+|||||||+|+.-..++.+..+... .+..... +.+   ....+  ..+  ..-..-..+. ..|.
T Consensus        12 ~~~~~~~~~~kli~fDlDGTLld~~~~~~l~~~~~~g~-~~~~~tG-R~~~~~~~~~~~~~~~~~~~l~~~~~~i~~nGa   89 (332)
T 1y8a_A           12 SGRENLYFQGHMFFTDWEGPWILTDFALELCMAVFNNA-RFFSNLS-EYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGV   89 (332)
T ss_dssp             --------CCCEEEECSBTTTBCCCHHHHHHHHHHCCH-HHHHHHH-HHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTC
T ss_pred             chhhhhCCCceEEEEECcCCCcCccHHHHHHHHHHCCC-EEEEEcC-CCchhhhhhhhccCeechhhcCCcCeEEEcCCc
Confidence            44555667789999999999999543344444443321 1111111 112   11110  222  2111111112 1232


Q ss_pred             CCCHHHHHHHHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCc
Q 028576          119 PFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKI  172 (207)
Q Consensus       119 ~~~~~~l~~~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l  172 (207)
                      ..  ....+.+.....+.+++.++|+.|++ |++++++|+.... .....+.+++
T Consensus        90 ~i--~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~  141 (332)
T 1y8a_A           90 KN--RDVERIAELSAKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV  141 (332)
T ss_dssp             CH--HHHHHHHHHHCCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             EE--EECCeEeeccCCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh
Confidence            21  11222233324668999999999999 9999999998643 3344455554

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.09  E-value=3.7e-06  Score=69.32  Aligned_cols=46  Identities=15%  Similarity=0.040  Sum_probs=31.8

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCc---H-HHHHHHHHhCCcccccCeEEEc
Q 028576          137 DGVEELLHELKQSNYEMHAFTNY---P-IWYEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~---~-~~~~~il~~~~l~~yFD~v~~S  182 (207)
                      |++.+.|++|+++|+++.++||.   + ..+...++.+|+....+.++++
T Consensus        25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~   74 (266)
T 3pdw_A           25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTT   74 (266)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCH
Confidence            56777888899999999999883   2 3344455777775555556554

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.04  E-value=6e-06  Score=68.29  Aligned_cols=47  Identities=13%  Similarity=0.116  Sum_probs=34.6

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEcc
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~  183 (207)
                      |++.+.|++|+++|+++.++||.+    ..+...++.+|+....+.++++.
T Consensus        24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~   74 (264)
T 3epr_A           24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTAT   74 (264)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHH
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHH
Confidence            788888999999999999999842    33444567788766566676653

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=97.99  E-value=2.2e-05  Score=64.91  Aligned_cols=37  Identities=11%  Similarity=0.181  Sum_probs=28.5

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      +...+.|++|+++|++++++|..+ .....+.+.+++.
T Consensus        25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   62 (279)
T 4dw8_A           25 SRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN   62 (279)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence            456778888999999999999975 4455566777774

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=97.93  E-value=1.8e-05  Score=69.05  Aligned_cols=48  Identities=10%  Similarity=0.052  Sum_probs=36.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHHh----CCcccccCeEEEcc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEI-IEDK----LKISTYLSWTFCSC  183 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~~----~~l~~yFD~v~~S~  183 (207)
                      .++|++.+|++.|+++|++++|+|.++..+-+ +.+.    +|+.  =++|++|.
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp--~e~ViG~~  195 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK--PENVIGVT  195 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC--GGGEEEEC
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC--HHHeEeee
Confidence            46899999999999999999999999877665 3333    3442  25677764

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=97.91  E-value=2.4e-05  Score=64.76  Aligned_cols=45  Identities=11%  Similarity=0.090  Sum_probs=31.8

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEE
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFC  181 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~  181 (207)
                      +...+.|++|+++|+++.++|..+ .....+++.+++....+.+++
T Consensus        25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~   70 (279)
T 3mpo_A           25 QATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAIT   70 (279)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEE
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEE
Confidence            456667888899999999999975 445566677777654444444

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.87  E-value=7.4e-06  Score=64.67  Aligned_cols=49  Identities=16%  Similarity=-0.017  Sum_probs=36.2

Q ss_pred             HHHHHhHCCCeEEEEcCcHHHHHHHHH--hCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          142 LLHELKQSNYEMHAFTNYPIWYEIIED--KLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       142 lL~~Lk~~G~kl~IlTN~~~~~~~il~--~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .|+.|+++|++++|+||. .....+++  .+++. +|    .+     .||.|+.++..+..
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~-~~~~~~l~~l~lgi~-~~----~g-----~~~K~~~l~~~~~~   94 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER-ACSKQTLSALKLDCK-TE----VS-----VSDKLATVDEWRKE   94 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS-CCCHHHHHTTCCCCC-EE----CS-----CSCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEeCc-HHHHHHHHHhCCCcE-EE----EC-----CCChHHHHHHHHHH
Confidence            689999999999999999 55556667  55653 32    22     37788988887754

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.75  E-value=2.6e-05  Score=68.63  Aligned_cols=50  Identities=16%  Similarity=0.035  Sum_probs=39.1

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHH-hCCcccccCeEEEccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIED-KLKISTYLSWTFCSCV  184 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~-~~~l~~yFD~v~~S~e  184 (207)
                      ++||+.+.|+.|+++|+++.++||.+    ......+. .+|+.-..|.|++|..
T Consensus        30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~   84 (352)
T 3kc2_A           30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHT   84 (352)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTG
T ss_pred             eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHH
Confidence            56899999999999999999999963    33333344 6888767788998865

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.70  E-value=6.8e-06  Score=66.50  Aligned_cols=65  Identities=15%  Similarity=0.028  Sum_probs=54.8

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..+||+.++|++|++. |+++|+||++.. .+.+++.++..++|+.+++.+++...|   ++|..+|..+
T Consensus        68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~L  133 (195)
T 2hhl_A           68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR---GNYVKDLSRL  133 (195)
T ss_dssp             EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET---TEEECCGGGS
T ss_pred             EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC---CceeeeHhHh
Confidence            4679999999999998 999999999754 556889999999999999999888776   5677776654

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.63  E-value=0.00013  Score=56.39  Aligned_cols=38  Identities=11%  Similarity=-0.143  Sum_probs=28.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH-H---HHHHHHHhCCc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP-I---WYEIIEDKLKI  172 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~-~---~~~~il~~~~l  172 (207)
                      +.|++.++|+.|+++|+++.|+|+-+ .   .....++..++
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi   66 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL   66 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence            44689999999999999999999963 2   23334566666

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.59  E-value=0.00011  Score=60.98  Aligned_cols=18  Identities=17%  Similarity=0.316  Sum_probs=14.1

Q ss_pred             CCCCCeEEEEcCCcccCC
Q 028576           53 KRKLPILLFDIMDTIVRD   70 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~   70 (207)
                      .|++++|+|||||||+|+
T Consensus         3 ~M~~kli~fDlDGTLl~~   20 (290)
T 3dnp_A            3 AMSKQLLALNIDGALLRS   20 (290)
T ss_dssp             ---CCEEEECCCCCCSCT
T ss_pred             CCcceEEEEcCCCCCCCC
Confidence            367899999999999994

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.51  E-value=1.9e-05  Score=62.90  Aligned_cols=65  Identities=14%  Similarity=0.019  Sum_probs=53.1

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..+||+.++|++|++. |+++|.||++.. .+.+++.++..++|+.+++.+++...|   +.|..+|..+
T Consensus        55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~L  120 (181)
T 2ght_A           55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR---GNYVKDLSRL  120 (181)
T ss_dssp             EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET---TEEECCGGGT
T ss_pred             EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC---CcEeccHHHh
Confidence            5689999999999997 999999999754 555789999999999999988877654   4566666544

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.46  E-value=0.0002  Score=53.43  Aligned_cols=26  Identities=27%  Similarity=0.110  Sum_probs=22.7

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP  160 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~  160 (207)
                      +.+++.++|++|+++|++++++|+.+
T Consensus        25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~   50 (126)
T 1xpj_A           25 PRLDVIEQLREYHQLGFEIVISTARN   50 (126)
T ss_dssp             BCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            55788889999999999999999974

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.45  E-value=0.00022  Score=59.06  Aligned_cols=24  Identities=8%  Similarity=0.216  Sum_probs=20.1

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcH
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYP  160 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~  160 (207)
                      +...++|++|+++|++++++|..+
T Consensus        24 ~~~~~~l~~l~~~g~~~~iaTGR~   47 (246)
T 3f9r_A           24 DEMRALIKRARGAGFCVGTVGGSD   47 (246)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCC
Confidence            345566899999999999999975

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=97.29  E-value=0.00032  Score=58.46  Aligned_cols=19  Identities=26%  Similarity=0.378  Sum_probs=15.6

Q ss_pred             cCCCCCeEEEEcCCcccCC
Q 028576           52 EKRKLPILLFDIMDTIVRD   70 (207)
Q Consensus        52 ~~~~~~~IlFDLDGTLvD~   70 (207)
                      ..++++.|+|||||||+|+
T Consensus        17 ~~~~~kli~~DlDGTLl~~   35 (283)
T 3dao_A           17 FQGMIKLIATDIDGTLVKD   35 (283)
T ss_dssp             --CCCCEEEECCBTTTBST
T ss_pred             hccCceEEEEeCcCCCCCC
Confidence            3478899999999999984

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.29  E-value=0.0005  Score=57.29  Aligned_cols=19  Identities=11%  Similarity=0.120  Sum_probs=14.0

Q ss_pred             cCCCCCeEEEEcCCcccCC
Q 028576           52 EKRKLPILLFDIMDTIVRD   70 (207)
Q Consensus        52 ~~~~~~~IlFDLDGTLvD~   70 (207)
                      ..++++.|+|||||||+|+
T Consensus        17 ~~~~~kli~~DlDGTLl~~   35 (285)
T 3pgv_A           17 FQGMYQVVASDLDGTLLSP   35 (285)
T ss_dssp             ----CCEEEEECCCCCSCT
T ss_pred             ccCcceEEEEeCcCCCCCC
Confidence            3478899999999999984

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.23  E-value=0.00047  Score=57.51  Aligned_cols=36  Identities=11%  Similarity=0.128  Sum_probs=26.6

Q ss_pred             HHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCccc
Q 028576          139 VEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIST  174 (207)
Q Consensus       139 v~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~  174 (207)
                      ..+.|++|+++|++++++|+.+ .....+++.+++..
T Consensus        31 ~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           31 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            4567888888999999999975 44555667777653

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.16  E-value=0.0012  Score=55.07  Aligned_cols=36  Identities=11%  Similarity=0.092  Sum_probs=24.4

Q ss_pred             HHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCccc
Q 028576          139 VEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIST  174 (207)
Q Consensus       139 v~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~  174 (207)
                      ..+.|++|+++|++++++|.-+ .....+++.+++..
T Consensus        27 ~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           27 VKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            3466777888888888888865 34445556666643

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.14  E-value=0.00016  Score=64.16  Aligned_cols=52  Identities=13%  Similarity=0.231  Sum_probs=40.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc-ccC-eEEEccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST-YLS-WTFCSCVIG  186 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~-yFD-~v~~S~evg  186 (207)
                      ...||+.++|++++ ++|.++|.|++... ...+++.++... ||+ .+++.++.|
T Consensus        75 ~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g  129 (372)
T 3ef0_A           75 KFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG  129 (372)
T ss_dssp             EECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSS
T ss_pred             EECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCC
Confidence            45799999999998 67999999998754 555778888777 898 565555554

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.10  E-value=0.00085  Score=56.87  Aligned_cols=35  Identities=14%  Similarity=0.089  Sum_probs=22.2

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHH--HhCC
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYP-IWYEIIE--DKLK  171 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il--~~~~  171 (207)
                      +...+.|++|+++|++++++|.-+ .....++  +.++
T Consensus        48 ~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~   85 (301)
T 2b30_A           48 SENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLK   85 (301)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhc
Confidence            345566777777788888888764 3344454  5444

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.04  E-value=0.0013  Score=53.24  Aligned_cols=15  Identities=27%  Similarity=0.288  Sum_probs=13.5

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      ++.|+||+||||+|+
T Consensus         3 ~kli~~DlDGTLl~~   17 (231)
T 1wr8_A            3 IKAISIDIDGTITYP   17 (231)
T ss_dssp             CCEEEEESTTTTBCT
T ss_pred             eeEEEEECCCCCCCC
Confidence            579999999999984

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.02  E-value=0.00097  Score=54.57  Aligned_cols=16  Identities=25%  Similarity=0.548  Sum_probs=14.3

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      +.++.|+|||||||+|
T Consensus        10 ~miKli~~DlDGTLl~   25 (268)
T 3r4c_A           10 HMIKVLLLDVDGTLLS   25 (268)
T ss_dssp             SCCCEEEECSBTTTBC
T ss_pred             CceEEEEEeCCCCCcC
Confidence            3478999999999998

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=96.91  E-value=0.0016  Score=52.99  Aligned_cols=37  Identities=8%  Similarity=-0.015  Sum_probs=27.3

Q ss_pred             hHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCccc
Q 028576          138 GVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIST  174 (207)
Q Consensus       138 gv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~  174 (207)
                      .+.+.|++|+++|++++++|+.+ .....+.+.+++..
T Consensus        26 ~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~   63 (227)
T 1l6r_A           26 KAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   63 (227)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence            56677888999999999999975 44555556666643

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=96.86  E-value=0.0058  Score=51.29  Aligned_cols=43  Identities=14%  Similarity=0.108  Sum_probs=35.6

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST  174 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~  174 (207)
                      ...+.||+.++++.|+++|++++++|.+... ...+.+++|+..
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~  182 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH  182 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCC
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCc
Confidence            3578899999999999999999999998654 445778888753

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.81  E-value=0.0026  Score=52.97  Aligned_cols=15  Identities=13%  Similarity=0.448  Sum_probs=13.7

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      +++|+|||||||+|+
T Consensus         4 ikli~~DlDGTLl~~   18 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNS   18 (288)
T ss_dssp             CCEEEEECCCCCSCT
T ss_pred             eEEEEEeCCCCCCCC
Confidence            689999999999994

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=96.01  E-value=0.0088  Score=55.44  Aligned_cols=54  Identities=15%  Similarity=0.081  Sum_probs=40.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhC-C-------------cccccCeEEEccccCCCCCCh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKL-K-------------ISTYLSWTFCSCVIGMFSKQC  192 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~-~-------------l~~yFD~v~~S~evg~~KPdP  192 (207)
                      ..-|++..+|++||+.| ++.|+||++.. .+.+++.+ |             ..+|||.||+    +..||..
T Consensus       246 ~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~----~A~KP~F  314 (555)
T 2jc9_A          246 VKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILV----DARKPLF  314 (555)
T ss_dssp             CCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEE----SCCTTGG
T ss_pred             CCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEE----eCCCCCc
Confidence            44588999999999999 99999999744 33444433 4             6789999775    4578874

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=95.88  E-value=0.0027  Score=53.35  Aligned_cols=17  Identities=12%  Similarity=0.247  Sum_probs=14.9

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      |.+++|+|||||||+|+
T Consensus        35 M~iKli~fDlDGTLld~   51 (304)
T 3l7y_A           35 MSVKVIATDMDGTFLNS   51 (304)
T ss_dssp             -CCSEEEECCCCCCSCT
T ss_pred             eeeEEEEEeCCCCCCCC
Confidence            67899999999999994

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=95.54  E-value=0.0039  Score=50.72  Aligned_cols=25  Identities=12%  Similarity=0.065  Sum_probs=20.3

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNY  159 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~  159 (207)
                      ..+++.++++.+++.|+.+.+.|+.
T Consensus        83 ~~~~~~~i~~~~~~~~~~~~~~~~~  107 (258)
T 2pq0_A           83 RREKVRALTEEAHKNGHPLVFMDAE  107 (258)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            3578889999999989888888764

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=95.40  E-value=0.014  Score=51.64  Aligned_cols=38  Identities=13%  Similarity=0.065  Sum_probs=32.6

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHHhCCc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWYEI-IEDKLKI  172 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~~~~l  172 (207)
                      ++||+.+++++|+++|++++|+|.+...+.+ +.+.+|+
T Consensus       222 ~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~  260 (385)
T 4gxt_A          222 TLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN  260 (385)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred             eCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence            6899999999999999999999999876554 6666665

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=95.02  E-value=0.0067  Score=49.34  Aligned_cols=15  Identities=27%  Similarity=0.501  Sum_probs=13.7

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      +++|+|||||||+|+
T Consensus         5 ~kli~fDlDGTLl~~   19 (274)
T 3fzq_A            5 YKLLILDIDGTLRDE   19 (274)
T ss_dssp             CCEEEECSBTTTBBT
T ss_pred             ceEEEEECCCCCCCC
Confidence            589999999999994

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=94.91  E-value=0.0088  Score=49.28  Aligned_cols=57  Identities=11%  Similarity=-0.056  Sum_probs=36.0

Q ss_pred             HHhHCCCeEEEEcCcHHHHHHHHHhCC--cccccCeEEEc----cccCCCCCChHHHHHhhhhh
Q 028576          145 ELKQSNYEMHAFTNYPIWYEIIEDKLK--ISTYLSWTFCS----CVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       145 ~Lk~~G~kl~IlTN~~~~~~~il~~~~--l~~yFD~v~~S----~evg~~KPdPeiy~~~~~~~  202 (207)
                      .+++.+++++++++... .+.+++.++  +.++|+.+.++    +-+...+|.+..++..+...
T Consensus       141 ~~~~~~~ki~i~~~~~~-~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l  203 (271)
T 1rlm_A          141 EIDDVLFKFSLNLPDEQ-IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW  203 (271)
T ss_dssp             GCCSCEEEEEEECCGGG-HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH
T ss_pred             hCCCceEEEEEEcCHHH-HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHh
Confidence            34556899999998753 233323322  44567766555    33567888999998877653

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=94.76  E-value=0.0099  Score=48.25  Aligned_cols=18  Identities=22%  Similarity=0.313  Sum_probs=15.4

Q ss_pred             CCCCCeEEEEcCCcccCC
Q 028576           53 KRKLPILLFDIMDTIVRD   70 (207)
Q Consensus        53 ~~~~~~IlFDLDGTLvD~   70 (207)
                      .|+++.|+||+||||++.
T Consensus         3 ~~~~kli~~DlDGTLl~~   20 (246)
T 2amy_A            3 APGPALCLFDVDGTLTAP   20 (246)
T ss_dssp             -CCSEEEEEESBTTTBCT
T ss_pred             CCCceEEEEECCCCcCCC
Confidence            477899999999999983

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=94.52  E-value=0.063  Score=48.84  Aligned_cols=51  Identities=14%  Similarity=0.073  Sum_probs=39.3

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHH---------hCCcccccCeEEEccccCCCCC
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIWYEI-IED---------KLKISTYLSWTFCSCVIGMFSK  190 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~---------~~~l~~yFD~v~~S~evg~~KP  190 (207)
                      -|.+..+|++|+++|-++.++||++-.+.. ++.         .-...+|||.||++.    .||
T Consensus       188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A----~KP  248 (470)
T 4g63_A          188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLA----NKP  248 (470)
T ss_dssp             CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESC----CTT
T ss_pred             CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECC----CCC
Confidence            488899999999999999999999744332 322         226889999999654    775

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=93.52  E-value=0.089  Score=43.21  Aligned_cols=50  Identities=20%  Similarity=0.094  Sum_probs=39.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCc---H-HHHHHHHHhCCcc-cccCeEEEccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNY---P-IWYEIIEDKLKIS-TYLSWTFCSCV  184 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~---~-~~~~~il~~~~l~-~yFD~v~~S~e  184 (207)
                      ++|++.+.|++|+++|++++++||.   + ......++.+++. ..++.++++.+
T Consensus        31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~~~   85 (284)
T 2hx1_A           31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGM   85 (284)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEHHH
T ss_pred             eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcHHH
Confidence            4578888999999999999999982   2 3444556888887 77888888754

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=93.32  E-value=0.027  Score=45.87  Aligned_cols=25  Identities=4%  Similarity=-0.103  Sum_probs=20.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNY  159 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~  159 (207)
                      ..+++.++++.+++.|+.+.+.|+.
T Consensus        86 ~~~~~~~i~~~~~~~~~~~~~~~~~  110 (261)
T 2rbk_A           86 PQEEVKAMAAFCEKKGVPCIFVEEH  110 (261)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEeCC
Confidence            3478889999999888888888764

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=93.00  E-value=0.036  Score=45.48  Aligned_cols=15  Identities=27%  Similarity=0.660  Sum_probs=13.3

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      ++.|+|||||||+++
T Consensus         2 ikli~~DlDGTLl~~   16 (268)
T 1nf2_A            2 YRVFVFDLDGTLLND   16 (268)
T ss_dssp             BCEEEEECCCCCSCT
T ss_pred             ccEEEEeCCCcCCCC
Confidence            579999999999983

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=92.72  E-value=0.13  Score=41.52  Aligned_cols=52  Identities=21%  Similarity=0.296  Sum_probs=41.6

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcc-cccCeEEEccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKIS-TYLSWTFCSCVIG  186 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~-~yFD~v~~S~evg  186 (207)
                      ...||+.++|++|+ ++|.|+|.|++.. .++.+++.++.. .+|++.+..+...
T Consensus        59 ~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~  112 (204)
T 3qle_A           59 AKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCV  112 (204)
T ss_dssp             EECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSE
T ss_pred             EeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEeccee
Confidence            45699999999998 6799999999874 455688898876 5899877765543

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=92.61  E-value=0.037  Score=45.08  Aligned_cols=14  Identities=21%  Similarity=0.449  Sum_probs=12.3

Q ss_pred             eEEEEcCCcccCCC
Q 028576           58 ILLFDIMDTIVRDP   71 (207)
Q Consensus        58 ~IlFDLDGTLvD~~   71 (207)
                      .|+|||||||+|+.
T Consensus         2 li~~DlDGTLl~~~   15 (259)
T 3zx4_A            2 IVFTDLDGTLLDER   15 (259)
T ss_dssp             EEEECCCCCCSCSS
T ss_pred             EEEEeCCCCCcCCC
Confidence            68999999999953

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=92.45  E-value=0.039  Score=45.24  Aligned_cols=17  Identities=24%  Similarity=0.417  Sum_probs=13.6

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      .+++.|+|||||||++.
T Consensus        11 ~~~kli~~DlDGTLl~~   27 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPA   27 (262)
T ss_dssp             --CEEEEEESBTTTBST
T ss_pred             cCeEEEEEeCccCCCCC
Confidence            45789999999999983

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=90.92  E-value=0.07  Score=43.31  Aligned_cols=13  Identities=38%  Similarity=0.547  Sum_probs=12.0

Q ss_pred             eEEEEcCCcccCC
Q 028576           58 ILLFDIMDTIVRD   70 (207)
Q Consensus        58 ~IlFDLDGTLvD~   70 (207)
                      .|+||+||||++.
T Consensus         5 li~~DlDGTLl~~   17 (244)
T 1s2o_A            5 LLISDLDNTWVGD   17 (244)
T ss_dssp             EEEECTBTTTBSC
T ss_pred             EEEEeCCCCCcCC
Confidence            8999999999984

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=90.87  E-value=0.081  Score=42.83  Aligned_cols=14  Identities=21%  Similarity=0.517  Sum_probs=12.1

Q ss_pred             CCeEEEEcCCcccC
Q 028576           56 LPILLFDIMDTIVR   69 (207)
Q Consensus        56 ~~~IlFDLDGTLvD   69 (207)
                      ++.|+||+||||++
T Consensus         1 ikli~~DlDGTLl~   14 (239)
T 1u02_A            1 MSLIFLDYDGTLVP   14 (239)
T ss_dssp             -CEEEEECBTTTBC
T ss_pred             CeEEEEecCCCCcC
Confidence            46899999999997

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=89.42  E-value=0.089  Score=42.75  Aligned_cols=13  Identities=23%  Similarity=0.669  Sum_probs=11.8

Q ss_pred             CCeEEEEcCCccc
Q 028576           56 LPILLFDIMDTIV   68 (207)
Q Consensus        56 ~~~IlFDLDGTLv   68 (207)
                      ++.|+|||||||+
T Consensus         2 ikli~~DlDGTLl   14 (249)
T 2zos_A            2 IRLIFLDIDKTLI   14 (249)
T ss_dssp             EEEEEECCSTTTC
T ss_pred             ccEEEEeCCCCcc
Confidence            4789999999999

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=88.90  E-value=0.42  Score=38.69  Aligned_cols=48  Identities=27%  Similarity=0.223  Sum_probs=33.6

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEcc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S~  183 (207)
                      +|++.+.|++|+++|+++.++||.+    ..+...++.+|+....+.+++|.
T Consensus        19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~   70 (263)
T 1zjj_A           19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG   70 (263)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH
Confidence            3678888999999999999999853    22333345677765556676654

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=86.28  E-value=0.96  Score=37.44  Aligned_cols=49  Identities=18%  Similarity=0.135  Sum_probs=34.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcc-cccCeEEEcc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKIS-TYLSWTFCSC  183 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~-~yFD~v~~S~  183 (207)
                      ++|++.+.|+.|+++|+++.++||.+    ..+...++.+++. -..+.+++|.
T Consensus        38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~   91 (306)
T 2oyc_A           38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSA   91 (306)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEEEHH
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEEcHH
Confidence            45688889999999999999999832    3344455777875 3345666543

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=86.24  E-value=0.24  Score=43.73  Aligned_cols=15  Identities=20%  Similarity=0.536  Sum_probs=13.4

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      +|.|+||+|||++++
T Consensus         1 ~~~~~fdvdgv~~~~   15 (384)
T 1qyi_A            1 MKKILFDVDGVFLSE   15 (384)
T ss_dssp             CCEEEECSBTTTBCS
T ss_pred             CceEEEecCceeech
Confidence            478999999999995

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=85.46  E-value=0.62  Score=43.69  Aligned_cols=44  Identities=16%  Similarity=0.198  Sum_probs=35.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLS  177 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD  177 (207)
                      .+.|++.+.+++|+++|++++++|+.+. ....+.+.+|+..+|.
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~  501 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA  501 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE
Confidence            3569999999999999999999999864 4555778888865443

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=84.12  E-value=0.037  Score=45.12  Aligned_cols=67  Identities=7%  Similarity=-0.081  Sum_probs=45.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHHHHH----HHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIWYEI----IEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~----il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      .++++.+.+..++ +|.+ .++||.......    .....++..+|+.+++++.++..||+|++|+.++...-
T Consensus       126 ~~~~~~~~~~~l~-~~~~-~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~  196 (264)
T 3epr_A          126 TYDKLATATLAIQ-NGAL-FIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILN  196 (264)
T ss_dssp             CHHHHHHHHHHHH-TTCE-EEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHH-CCCe-EEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhC
Confidence            3567777777774 5654 578886421110    11112355678888889999999999999999987653

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=83.59  E-value=1.6  Score=35.00  Aligned_cols=48  Identities=25%  Similarity=0.180  Sum_probs=32.0

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S  182 (207)
                      +.|++.+.+++|+++|+++.++||.+    ..+...++.+|+...-+.++.+
T Consensus        34 ~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~   85 (271)
T 1vjr_A           34 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTS   85 (271)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred             ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcH
Confidence            34677888999999999999999853    2344455667764333445543

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=81.81  E-value=0.45  Score=36.50  Aligned_cols=17  Identities=18%  Similarity=0.282  Sum_probs=14.1

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      ..+++++||+||||+++
T Consensus        12 ~~~k~~~~D~Dgtl~~~   28 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISE   28 (176)
T ss_dssp             -CCEEEEECSBTTTBCC
T ss_pred             CcCcEEEEeCCCCeEcC
Confidence            45689999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	207
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.84
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.82
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.82
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.8
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.79
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.78
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.78
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.78
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.77
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.76
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.75
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.73
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.71
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.69
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.63
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.59
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.59
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.59
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.34
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.33
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.33
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.26
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.09
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	98.89
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.79
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.77
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.51
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.29
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.16
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.03
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.0
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	97.95
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	97.82
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	97.69
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	97.51
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.34
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.31
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	97.3
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.27
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.23
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	96.78
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.63
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	96.48
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	96.43
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	94.6
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	93.68
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	93.58
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	93.28
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	93.04
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	92.74
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	92.0
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	91.84
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	91.6
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	91.39
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	90.97
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	89.84
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	88.75
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	87.08
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	86.43
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	82.88
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	82.6
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	80.62

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.84  E-value=2.8e-21  Score=152.47  Aligned_cols=137  Identities=13%  Similarity=0.022  Sum_probs=92.2

Q ss_pred             CCCCeEEEEcCCcccCC--ChhchHHHHH---cCC--HHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHH
Q 028576           54 RKLPILLFDIMDTIVRD--PFYHDVPAFF---GMS--MKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLK  126 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~--~~~~~l~~~~---g~~--~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~  126 (207)
                      |+|++||||+||||+|+  ....++.+.+   |.+  .++....        .  | .+....++.+... .+.-.+.+.
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~--~-~~~~~~~~~~~~~-~~~~~~~~~   68 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQA--------L--K-VSTPFAIETFAPN-LENFLEKYK   68 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHH--------H--H-HCHHHHHHHHCTT-CTTHHHHHH
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhh--------h--h-ccchhhhhhhhHH-HHHHHHHHH
Confidence            78999999999999992  2233344433   332  2222111        1  1 1122222333221 111122222


Q ss_pred             HHH---HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          127 ICM---KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       127 ~~~---~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +..   .....++||+.++|++|+++|++++|+||++......++++++.++||.+++|++++..||+|++|+.++.-.
T Consensus        69 ~~~~~~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~  147 (187)
T d2fi1a1          69 ENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKY  147 (187)
T ss_dssp             HHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHT
T ss_pred             HHHHHHhhcCcccchhHHHHHHHHhhhccccccccCccchhhhhhhhccccccccccccccccccCCCHHHHHHHHHHc
Confidence            221   2345688999999999999999999999987665566789999999999999999999999999999998743

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.8e-20  Score=149.61  Aligned_cols=72  Identities=10%  Similarity=0.001  Sum_probs=64.5

Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ....++||+.++|+.|+++|++++|+||++.. ...+++.+++.+|||.+++|++++..||+|++|+.++.-.
T Consensus        85 ~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l  157 (218)
T d1te2a_          85 ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKL  157 (218)
T ss_dssp             HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHH
T ss_pred             ccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHc
Confidence            44567899999999999999999999999855 5557899999999999999999999999999999998654

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.82  E-value=1.1e-20  Score=149.98  Aligned_cols=134  Identities=16%  Similarity=0.125  Sum_probs=91.8

Q ss_pred             CeEEEEcCCcccCC--ChhchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHH
Q 028576           57 PILLFDIMDTIVRD--PFYHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKIC  128 (207)
Q Consensus        57 ~~IlFDLDGTLvD~--~~~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~  128 (207)
                      +++|||+||||+|+  ....++.+.+   |.  +.+++..         +..| ....+.++++... +.  +.+.+...
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~   69 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVRE---------FIFK-YSVQDLLVRVAEDRNL--DVEVLNQV   69 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHH---------HHHH-SCHHHHHHHHHHHHTC--CHHHHHHH
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHH---------hhcc-cccccccccccchhhh--hHHHHHHH
Confidence            48999999999994  1233344443   32  2222221         1111 2234455554433 22  22222221


Q ss_pred             ---H----HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          129 ---M----KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       129 ---~----~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                         +    .....++||+.++|+.|+++|++++|+||++.....+++++|+.+|||.+++|++++..||+|++|+.++..
T Consensus        70 ~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~  149 (204)
T d2go7a1          70 RAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDK  149 (204)
T ss_dssp             HHHHHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHH
T ss_pred             HHHHHHhhcccCcccchHHhhhhcccccccchhhhcccchhhhhhhhhcccccccccccccccccccchhHHHHHHHHHH
Confidence               1    123467899999999999999999999998765556788999999999999999999999999999999876


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       150 ~  150 (204)
T d2go7a1         150 Y  150 (204)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.80  E-value=6.4e-20  Score=145.97  Aligned_cols=135  Identities=12%  Similarity=0.054  Sum_probs=90.1

Q ss_pred             CCCCeEEEEcCCcccCC-C-hhchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHH
Q 028576           54 RKLPILLFDIMDTIVRD-P-FYHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLK  126 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~-~-~~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~  126 (207)
                      |+|++|+||+||||+|+ + +.+++..++   |.  ..++....+..           +.++....+.  ......+++.
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~   67 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPM-----------AAEQAMTELG--IAASEFDHFQ   67 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTS-----------CHHHHHHHTT--CCGGGHHHHH
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcc-----------hhhhhhhccc--cchhhHHHHH
Confidence            78999999999999994 2 333455544   22  22333222111           1112221111  0111122222


Q ss_pred             HHH-------HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHh
Q 028576          127 ICM-------KKGYAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGN  198 (207)
Q Consensus       127 ~~~-------~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~  198 (207)
                      ..+       .....++||+.++|++|++ +++++|+||++. ....+++++++.++||.++++++++..||+|++|+.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~  146 (207)
T d2hdoa1          68 AQYEDVMASHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTA  146 (207)
T ss_dssp             HHHHHHHTTCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHH
T ss_pred             HHhhhhhcccccccccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhccc
Confidence            211       1235688999999999985 699999999874 4556889999999999999999999999999999999


Q ss_pred             hhhh
Q 028576          199 LILI  202 (207)
Q Consensus       199 ~~~~  202 (207)
                      +.-.
T Consensus       147 ~~~~  150 (207)
T d2hdoa1         147 LEKV  150 (207)
T ss_dssp             HHHT
T ss_pred             ccce
Confidence            8653

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.79  E-value=3.2e-19  Score=141.88  Aligned_cols=71  Identities=17%  Similarity=0.017  Sum_probs=64.2

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...++||+.++|++|+++|++++|+||++.. ...+++++|+.++||.+++|++++..||+|++|..++...
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~  164 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKF  164 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHh
Confidence            3568999999999999999999999998754 5567899999999999999999999999999999998654

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.78  E-value=6e-19  Score=142.40  Aligned_cols=146  Identities=16%  Similarity=0.109  Sum_probs=93.4

Q ss_pred             CCeEEEEcCCcccCCC-h----hchHHHHH---cCCHHHHHHhhC---chHHHHHHhCCC-CHH----HHHHHHhhc-CC
Q 028576           56 LPILLFDIMDTIVRDP-F----YHDVPAFF---GMSMKELIECKH---PNAWIEFEMGMI-SEM----ELARKFFTD-GR  118 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~-~----~~~l~~~~---g~~~~~~~~~~~---~~~w~~~e~G~I-s~~----e~~~~~~~~-g~  118 (207)
                      +|+|+||+||||+|.. .    ...+.+.+   +.+.+.+.....   ...+.....+.. ...    +.++..... +.
T Consensus         2 iK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (230)
T d1x42a1           2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYGF   81 (230)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHCC
T ss_pred             CeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhhh
Confidence            4799999999999821 1    11122333   234443332211   122222222222 222    233333332 32


Q ss_pred             CC--CHH-HHHHHHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHH
Q 028576          119 PF--DLE-GLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLK  194 (207)
Q Consensus       119 ~~--~~~-~l~~~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPei  194 (207)
                      ..  ... .....+.....++||+.++|+.|++ |++++++||++.. ....++.+|+.++||.+++|++++..||+|++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~  160 (230)
T d1x42a1          82 KYPENFWEIHLRMHQRYGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRI  160 (230)
T ss_dssp             CCCTTHHHHHHHHHHHHCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHH
T ss_pred             chHHHHHHHHHHHHHhhCcccccHHHHHHHhhc-cCceeeeeccccccchhhhcccccccccccccccccccccchhhHH
Confidence            22  222 2233344556789999999999975 7999999998754 55577899999999999999999999999999


Q ss_pred             HHHhhhhh
Q 028576          195 ERGNLILI  202 (207)
Q Consensus       195 y~~~~~~~  202 (207)
                      |+.++...
T Consensus       161 ~~~~~~~l  168 (230)
T d1x42a1         161 FELALKKA  168 (230)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhhh
Confidence            99998765

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.78  E-value=2.9e-19  Score=146.36  Aligned_cols=72  Identities=13%  Similarity=0.095  Sum_probs=63.5

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHH-HHHHhCCccccc-CeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYE-IIEDKLKISTYL-SWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~-~il~~~~l~~yF-D~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ...++||+.++|++|+++|++++|+||.++... .+++.+++.+|| |.+++|++++..||+|++|..++...-
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~  170 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELG  170 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHT
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHhC
Confidence            356899999999999999999999999986544 477899999987 899999999999999999999987543

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.78  E-value=5.5e-19  Score=141.15  Aligned_cols=143  Identities=13%  Similarity=0.104  Sum_probs=94.6

Q ss_pred             CCeEEEEcCCcccCC-C-hhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHH-----
Q 028576           56 LPILLFDIMDTIVRD-P-FYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKI-----  127 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~-~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~-----  127 (207)
                      |++|+||+||||+|+ + +..++.+++    +.+........|.+...| .+..+..+.++.. +...+.+.+..     
T Consensus         2 ikaiiFD~DGTL~ds~~~~~~a~~~~~----~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (221)
T d1o08a_           2 FKAVLFDLDGVITDTAEYHFRAWKALA----EEIGINGVDRQFNEQLKG-VSREDSLQKILDLADKKVSAEEFKELAKRK   76 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHHH----HHTTCCCCCHHHHTTTTT-CCHHHHHHHHHTTSSSCCCHHHHHHHHHHH
T ss_pred             CcEEEEcCCCCeEcCHHHHHHHHHHHH----HHcCCCCChHHHHHHHhh-ccchhhhhhccccccccchhhhhhhHHHHH
Confidence            589999999999993 2 222333333    111001111222222222 3445555555543 33444433321     


Q ss_pred             --HHHh------cCCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhh
Q 028576          128 --CMKK------GYAYLDGVEELLHELKQSNYEMHAFTNYPIWYEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNL  199 (207)
Q Consensus       128 --~~~~------~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~  199 (207)
                        .+.+      ...++||+.++|+.|++.|++++++||+.. .+..++..++.++|+.+++|++++..||+|++|+.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~-~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l  155 (221)
T d1o08a_          77 NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN-GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAA  155 (221)
T ss_dssp             HHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT-HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHH
T ss_pred             HhhccccccccccccccCCceeccccccccccceEEEeecch-hhHHHHhhccccccccccccccccccccChHHHHHHH
Confidence              1111      235789999999999999999999999743 3456788999999999999999999999999999999


Q ss_pred             hhhhc
Q 028576          200 ILIFI  204 (207)
Q Consensus       200 ~~~~~  204 (207)
                      ...-+
T Consensus       156 ~~~~i  160 (221)
T d1o08a_         156 HAVGV  160 (221)
T ss_dssp             HHTTC
T ss_pred             HHcCC
Confidence            87654

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.4e-18  Score=139.53  Aligned_cols=72  Identities=13%  Similarity=-0.058  Sum_probs=63.0

Q ss_pred             hcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          131 KGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       131 ~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      +...++||+.++|++|+ +|++++|+||++.. ....++++|+.+|||.+++|++++..||+|++|+.++...-
T Consensus       106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~  178 (247)
T d2gfha1         106 QHMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLG  178 (247)
T ss_dssp             HTCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHT
T ss_pred             ccCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhh
Confidence            45678999999999998 58999999998754 44567889999999999999999999999999999987543

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.76  E-value=8.6e-18  Score=133.56  Aligned_cols=147  Identities=10%  Similarity=0.021  Sum_probs=94.5

Q ss_pred             CCeEEEEcCCcccCC-ChhchHHHHHcCCHHHHHH-----hhCchHHHHHHhCCCCHHHHHHHH----hhc-CCCCCHHH
Q 028576           56 LPILLFDIMDTIVRD-PFYHDVPAFFGMSMKELIE-----CKHPNAWIEFEMGMISEMELARKF----FTD-GRPFDLEG  124 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~~~~~l~~~~g~~~~~~~~-----~~~~~~w~~~e~G~Is~~e~~~~~----~~~-g~~~~~~~  124 (207)
                      +|+|+||+||||+|. +....+.+.+.....++..     ......|..............+..    .+. +...+...
T Consensus         2 IKaIiFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (220)
T d1zrna_           2 IKGIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDLDART   81 (220)
T ss_dssp             CCEEEECSBTTTEETHHHHHHHHHHSTTTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred             CEEEEECCCCCcEeCHHHHHHHHHHHHHhchhhhHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHhhhhhhhHHH
Confidence            589999999999993 1222233333222221111     011112222222333333333221    222 44445443


Q ss_pred             HHHHH--HhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          125 LKICM--KKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       125 l~~~~--~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      ....+  .....+++++.++|+.|+++|++++++||+... ....++..++..+||.+++|++++..||+|++|+.++.-
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~  161 (220)
T d1zrna_          82 RSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQA  161 (220)
T ss_dssp             HHHHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHH
T ss_pred             HHHHhhhhccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHH
Confidence            33333  234567899999999999999999999999744 445678899999999999999999999999999999875


Q ss_pred             h
Q 028576          202 I  202 (207)
Q Consensus       202 ~  202 (207)
                      .
T Consensus       162 ~  162 (220)
T d1zrna_         162 L  162 (220)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5e-18  Score=133.67  Aligned_cols=147  Identities=11%  Similarity=0.069  Sum_probs=98.3

Q ss_pred             CCeEEEEcCCcccCCChhchHH---HHHcCCHHHHHHh----hCchHHHHHHhCCCCHHHHHHHHh-------h-cC---
Q 028576           56 LPILLFDIMDTIVRDPFYHDVP---AFFGMSMKELIEC----KHPNAWIEFEMGMISEMELARKFF-------T-DG---  117 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~~~~l~---~~~g~~~~~~~~~----~~~~~w~~~e~G~Is~~e~~~~~~-------~-~g---  117 (207)
                      +|+|+||+||||+|+.....+.   ...+...+.+...    .....|.....+..+...+.....       . .+   
T Consensus         2 Ik~vlFD~dGtL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (225)
T d1zd3a1           2 LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCL   81 (225)
T ss_dssp             CCEEEECTBTTTEESCGGGHHHHHHHHTTCCTTHHHHHHSTTGGGSHHHHHHHTSSCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             cEEEEEcCCCCeecCHHHHHHHHHHHHcCCChHHHHHHHHhccchhHHHHHHhccccchhhHHHHHHhhhhhhhhhhhhh
Confidence            6899999999999954433322   2234332222221    112456666777776643332211       1 11   


Q ss_pred             -CCCCHHHHHHHHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHH----HHH-HHHHhCCcccccCeEEEccccCCCCCC
Q 028576          118 -RPFDLEGLKICMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPI----WYE-IIEDKLKISTYLSWTFCSCVIGMFSKQ  191 (207)
Q Consensus       118 -~~~~~~~l~~~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~----~~~-~il~~~~l~~yFD~v~~S~evg~~KPd  191 (207)
                       ......+....+.....++||+.++|..|+++|++++++||...    ... ......++.+|||.+++|++++..||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~  161 (225)
T d1zd3a1          82 PKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPE  161 (225)
T ss_dssp             CTTCCHHHHHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTC
T ss_pred             hhHHHHHHHHHHHhhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhH
Confidence             11234444555556678899999999999999999999999742    122 233456788999999999999999999


Q ss_pred             hHHHHHhhhhh
Q 028576          192 CLKERGNLILI  202 (207)
Q Consensus       192 Peiy~~~~~~~  202 (207)
                      |++|+.++...
T Consensus       162 ~~~~~~~~~~~  172 (225)
T d1zd3a1         162 PQIYKFLLDTL  172 (225)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHhhhc
Confidence            99999999765

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=3.3e-18  Score=131.60  Aligned_cols=145  Identities=17%  Similarity=0.201  Sum_probs=108.2

Q ss_pred             eEEEEcCCcccCCChhch---HHHHHcCCHHHHHHhhC-chHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHHHHHHHhc
Q 028576           58 ILLFDIMDTIVRDPFYHD---VPAFFGMSMKELIECKH-PNAWIEFEMGMISEMELARKFFTD-GRPFDLEGLKICMKKG  132 (207)
Q Consensus        58 ~IlFDLDGTLvD~~~~~~---l~~~~g~~~~~~~~~~~-~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l~~~~~~~  132 (207)
                      .+|||+||||+|.++...   +....+.+.+....... ...|..++.+.++..++.+.+... +.+...+.........
T Consensus         2 l~iFDlDgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (197)
T d2b0ca1           2 LYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAV   81 (197)
T ss_dssp             EEEECCBTTTEEEETHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHHHHHTC
T ss_pred             EEEEeCCCCcCcCHHHHHHHHHHHHhCCCHHHHHHHHhcccHHHHHHhccccHHHHHHHHhhhhccchhHHHHHHHHHHh
Confidence            478999999999544333   33344777777665443 456888999999988888777655 4455544444433322


Q ss_pred             -CCcchhHHHHHHHHhHCCCeEEEEcCcHH-HHHHHHHhC-CcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 -YAYLDGVEELLHELKQSNYEMHAFTNYPI-WYEIIEDKL-KISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 -~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~~~~il~~~-~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                       ..+++|+.+++..++++|++++++||++. ..+..+... ++.++||.+++|+++|..||+|++|+.++...
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~  154 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAE  154 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhc
Confidence             35789999999999999999999999863 333344554 78999999999999999999999999998754

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.71  E-value=1.6e-16  Score=127.77  Aligned_cols=69  Identities=7%  Similarity=-0.085  Sum_probs=60.3

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIF  203 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~  203 (207)
                      ..++|++.++|++|+  |++++++||++.. ....+++.++.++||.+++|+++|..||+|++|+.|+...=
T Consensus        92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg  161 (245)
T d1qq5a_          92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLG  161 (245)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHC
T ss_pred             cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhC
Confidence            467899999999885  6899999998754 55577889999999999999999999999999999997653

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=3.7e-18  Score=135.70  Aligned_cols=74  Identities=14%  Similarity=0.047  Sum_probs=62.5

Q ss_pred             HHhcCCcchhHHHHHHHHhHCCCeEEEEcCcH----HHHH-HHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          129 MKKGYAYLDGVEELLHELKQSNYEMHAFTNYP----IWYE-IIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       129 ~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~-~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      +.....++||+.++|.+|+++|++++++||..    .... ..+...++.+|||.+++|++++..||+|++|+.++..+
T Consensus        92 ~~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~  170 (222)
T d1cr6a1          92 AMAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTL  170 (222)
T ss_dssp             HHHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHH
T ss_pred             HHhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHh
Confidence            34456789999999999999999999999953    2222 34567899999999999999999999999999998754

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.63  E-value=4.4e-16  Score=124.05  Aligned_cols=136  Identities=14%  Similarity=0.139  Sum_probs=88.6

Q ss_pred             CCeEEEEcCCcccCC-C-hhchHHHHH---cC--CHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc-CCCCCHHHH--
Q 028576           56 LPILLFDIMDTIVRD-P-FYHDVPAFF---GM--SMKELIECKHPNAWIEFEMGMISEMELARKFFTD-GRPFDLEGL--  125 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~-~-~~~~l~~~~---g~--~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~-g~~~~~~~l--  125 (207)
                      |++||||+||||+|+ + ..+++.+++   |.  +.+++.         ....| ++..+..+.+... +.+.+.+.+  
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~---------~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~   71 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMG---------ERFAG-MTWKNILLQVESEASIPLSASLLDK   71 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHH---------HHHTT-CCHHHHHHHHHHHHCCCCCTHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHH---------HHHhh-hccccccccccccccccccccchhH
Confidence            789999999999995 2 223354443   22  222221         22234 4445555555543 443332211  


Q ss_pred             -HH----HHHhcCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccc---cCCCCCChHHHH
Q 028576          126 -KI----CMKKGYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCV---IGMFSKQCLKER  196 (207)
Q Consensus       126 -~~----~~~~~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~e---vg~~KPdPeiy~  196 (207)
                       ..    .......++||+.++|++|+.   +.+++||+... ....++++++.+||+.++++.+   .+..||+|++|+
T Consensus        72 ~~~~~~~~~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~  148 (222)
T d2fdra1          72 SEKLLDMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFL  148 (222)
T ss_dssp             HHHHHHHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHH
T ss_pred             HHHHHHHHhhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHH
Confidence             11    223446789999999998864   56899998754 5557899999999997666655   577899999999


Q ss_pred             Hhhhhhhc
Q 028576          197 GNLILIFI  204 (207)
Q Consensus       197 ~~~~~~~~  204 (207)
                      .++..+=+
T Consensus       149 ~~~~~l~~  156 (222)
T d2fdra1         149 HGAAQFGV  156 (222)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHhhCC
Confidence            99876543

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.59  E-value=2.4e-15  Score=118.70  Aligned_cols=68  Identities=16%  Similarity=0.125  Sum_probs=56.7

Q ss_pred             cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          132 GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ...+++|+.++|+.|+.+ ++++|+||++.. ...+++++++..|||.++++++.+  ||+|++|..++...
T Consensus        82 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~--~~~p~~~~~~~~~~  150 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEA--PHKADVIHQALQTH  150 (210)
T ss_dssp             SCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSC--CSHHHHHHHHHHHT
T ss_pred             cccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhcccccccccccccccc--cccccccchhhhhh
Confidence            346789999999999876 699999999754 555789999999999999998875  77778888887653

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2e-15  Score=120.21  Aligned_cols=70  Identities=6%  Similarity=-0.076  Sum_probs=59.1

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHHHHHH-HHHhCCcccccCeEEEc-cccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPIWYEI-IEDKLKISTYLSWTFCS-CVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-il~~~~l~~yFD~v~~S-~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|++|+++|++++|+||++...+. .++..++.++|+.+..+ ++++..||+|++|+.++...
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~  197 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSI  197 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHh
Confidence            357899999999999999999999999866554 56888999999865544 55788999999999998765

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.59  E-value=2.5e-16  Score=126.40  Aligned_cols=69  Identities=14%  Similarity=-0.044  Sum_probs=60.0

Q ss_pred             CCcchhHHHHHHHHhHCC-CeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          133 YAYLDGVEELLHELKQSN-YEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G-~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      ..++||+.++|+.|+++| ++++|+||++.. ....++.+|+.+|||.+++++++...||+|+++...+..
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~  160 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARR  160 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHH
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHhhh
Confidence            357899999999999987 899999998754 555789999999999999999999999999997765443

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.34  E-value=2.8e-12  Score=101.92  Aligned_cols=112  Identities=10%  Similarity=0.007  Sum_probs=77.5

Q ss_pred             CeEEEEcCCcccCCChhchHHHHHcCCH-HHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcCCc
Q 028576           57 PILLFDIMDTIVRDPFYHDVPAFFGMSM-KELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGYAY  135 (207)
Q Consensus        57 ~~IlFDLDGTLvD~~~~~~l~~~~g~~~-~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~~~  135 (207)
                      ..|+||+||||++......+.+.++... ++        ....+..|.++..+.....+........+...........+
T Consensus         5 ~lVifD~DGTL~~~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (226)
T d2feaa1           5 PFIICDFDGTITMNDNIINIMKTFAPPEWMA--------LKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKI   76 (226)
T ss_dssp             EEEEECCTTTTBSSCHHHHHHHHHSCTHHHH--------HHHHHHTTSSCHHHHHHHHHTTSBGGGHHHHHHHHHHHCCB
T ss_pred             eEEEEeCCCCCcCchHHHHHHHHHCcchHHH--------HHHHHHcCcccHHHHHHHHHHHhccccHHHHHHHHHhccch
Confidence            4799999999998533333333333321 21        23344568888877777666542222245555555666789


Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccccc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYL  176 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yF  176 (207)
                      +||+.++|+.|+++|++++++||+... ...+++++++.++|
T Consensus        77 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~  118 (226)
T d2feaa1          77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRI  118 (226)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGE
T ss_pred             hHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccce
Confidence            999999999999999999999999855 55578888887776

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=3.9e-13  Score=103.73  Aligned_cols=65  Identities=9%  Similarity=-0.040  Sum_probs=54.6

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH-H-HHHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhh
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI-W-YEIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILI  202 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~-~-~~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~  202 (207)
                      ..++||+.++|++|+++|++++|+||++. . ....++.+++..+|+.+..+     .||+|+.|..++...
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~kp~~~~~~~~~~~~  111 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-----PGSKVTHFERLHHKT  111 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-----SSCHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc-----cCCChHHHHHHHHHh
Confidence            46899999999999999999999998753 3 33467889999999987643     689999999998754

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.9e-12  Score=104.12  Aligned_cols=112  Identities=15%  Similarity=0.183  Sum_probs=66.9

Q ss_pred             CCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHH-HHHHHhcCC
Q 028576           56 LPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGL-KICMKKGYA  134 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l-~~~~~~~~~  134 (207)
                      -++|+||+||||+|......+...+|...+ .     .....+..+|.++..++++.....-.. ..++. +........
T Consensus        10 ~~aV~FD~DGTLi~~e~~~~l~~~~g~~~~-~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   82 (217)
T d1nnla_          10 ADAVCFDVDSTVIREEGIDELAKICGVEDA-V-----SEMTRRAMGGAVPFKAALTERLALIQP-SREQVQRLIAEQPPH   82 (217)
T ss_dssp             CSEEEEETBTTTBSSCHHHHHHHHTTCTTT-C-----------------CHHHHHHHHHHHHCC-CHHHHHHHHHHSCCC
T ss_pred             CCEEEEcCccccCCccHHHHHHHHcCChHH-H-----HHHHHHHHcCCCCHHHHHHHHHHhccc-chHHHHHHHHhhccc
Confidence            368999999999994332333333443211 0     011123335778877776654432111 22333 333345567


Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCccc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIST  174 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~  174 (207)
                      ++||+.+++++||++|++++|+|++... ...+++.+|+..
T Consensus        83 l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~  123 (217)
T d1nnla_          83 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA  123 (217)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG
T ss_pred             cCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcc
Confidence            8999999999999999999999999755 555788999864

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.26  E-value=1.3e-11  Score=96.69  Aligned_cols=65  Identities=9%  Similarity=0.036  Sum_probs=46.7

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHHHHH------------HHHhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIWYEI------------IEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~------------il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .+++++.+++.    .+.++++.|+.......            .++.+++.+|||.+++|+.. ..||+|++|+.++..
T Consensus        97 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~-~~KP~p~~f~~~~~~  171 (225)
T d2g80a1          97 PVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS-GKKTETQSYANILRD  171 (225)
T ss_dssp             CCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHH-CCTTCHHHHHHHHHH
T ss_pred             cchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecccc-CCCCChhHhHHHHHh
Confidence            35667666554    45788999997543222            12456899999999888655 579999999999876


Q ss_pred             hh
Q 028576          202 IF  203 (207)
Q Consensus       202 ~~  203 (207)
                      +=
T Consensus       172 lg  173 (225)
T d2g80a1         172 IG  173 (225)
T ss_dssp             HT
T ss_pred             cc
Confidence            53

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.09  E-value=1.2e-11  Score=95.84  Aligned_cols=70  Identities=14%  Similarity=0.025  Sum_probs=49.0

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcH----------------HHHHHHHHhCCccc---ccCeEEEccccCCCCCChH
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYP----------------IWYEIIEDKLKIST---YLSWTFCSCVIGMFSKQCL  193 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~----------------~~~~~il~~~~l~~---yFD~v~~S~evg~~KPdPe  193 (207)
                      ..++||+.++|+.|+++||+++++||.+                ..+...+...++..   ||+..+.+.+.+.+||+|+
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~  108 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVK  108 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSG
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccH
Confidence            3578999999999999999999999963                11223345555421   3443445566778899999


Q ss_pred             HHHHhhhhh
Q 028576          194 KERGNLILI  202 (207)
Q Consensus       194 iy~~~~~~~  202 (207)
                      +++.++...
T Consensus       109 ~~~~~~~~~  117 (161)
T d2fpwa1         109 LVERYLAEQ  117 (161)
T ss_dssp             GGGGGC---
T ss_pred             HHHHHHHhc
Confidence            999987643

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=98.89  E-value=2.1e-09  Score=83.69  Aligned_cols=70  Identities=16%  Similarity=0.235  Sum_probs=48.0

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCcccccCeEEEc-----------ccc
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKISTYLSWTFCS-----------CVI  185 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~yFD~v~~S-----------~ev  185 (207)
                      ++++||+.++|+.|+++||+++++||.+.                +....+...+. ...+..++.           .+.
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~cp~~p~~~~~~~~~~~  104 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV-DLDGIYYCPHHPQGSVEEFRQVC  104 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC-CCSEEEEECCBTTCSSGGGBSCC
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcc-cccceeecccccccccccccccc
Confidence            36889999999999999999999999742                11112223333 222233332           346


Q ss_pred             CCCCCChHHHHHhhhhhh
Q 028576          186 GMFSKQCLKERGNLILIF  203 (207)
Q Consensus       186 g~~KPdPeiy~~~~~~~~  203 (207)
                      ..+||+|+.++.++...=
T Consensus       105 ~~rKP~p~m~~~~~~~~~  122 (182)
T d2gmwa1         105 DCRKPHPGMLLSARDYLH  122 (182)
T ss_dssp             SSSTTSCHHHHHHHHHHT
T ss_pred             cccCCccccccchhhhcc
Confidence            678999999999987643

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.79  E-value=5.6e-09  Score=77.69  Aligned_cols=66  Identities=14%  Similarity=0.122  Sum_probs=44.9

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH--------HHHHHHH---HhCCcccccCeEEEccccCCCCCChHHHHHhhhh
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP--------IWYEIIE---DKLKISTYLSWTFCSCVIGMFSKQCLKERGNLIL  201 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~--------~~~~~il---~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~  201 (207)
                      .++||+.++|+.|+++||+++++||.+        .++....   ..+. ..+++ .......+..+|++...+..|..
T Consensus        36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d~~~k~~~l~~  112 (149)
T d1ltqa1          36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA-GVPLV-MQCQREQGDTRKDDVVKEEIFWK  112 (149)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT-CCCCS-EEEECCTTCCSCHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcC-CCcEE-EeecccccccCCchHHHHHHHHH
Confidence            578999999999999999999999974        2222211   1111 12233 44555677788888887777654

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.77  E-value=4.3e-08  Score=75.02  Aligned_cols=124  Identities=19%  Similarity=0.128  Sum_probs=70.9

Q ss_pred             CCCCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcC
Q 028576           54 RKLPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTDGRPFDLEGLKICMKKGY  133 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~g~~~~~~~l~~~~~~~~  133 (207)
                      ++.++|+||+||||+|..-...+...+|...+. . .    ...++..+.....+............... .........
T Consensus         2 ~kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~-~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~   74 (210)
T d1j97a_           2 KKKKLILFDFDSTLVNNETIDEIAREAGVEEEV-K-K----ITKEAMEGKLNFEQSLRKRVSLLKDLPIE-KVEKAIKRI   74 (210)
T ss_dssp             CCCCEEEECCCCCCBSSCHHHHHHHHTTCHHHH-H-H----HHHHHHTTSSCHHHHHHHHHHTTTTCBHH-HHHHHHHTC
T ss_pred             CCCeEEEEeCCCCcCCchHHHHHHHHcCCcHHH-H-H----HHHHHhcccchhHHHHHHHHHHHhhhHHH-HHHHHhhhh
Confidence            456999999999999953222333333442211 1 1    11122233344444443333221112222 223334456


Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCV  184 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~e  184 (207)
                      .+++|+.++++.|+.+|+.++++|++... .....++.+...+|...+..++
T Consensus        75 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (210)
T d1j97a_          75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD  126 (210)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET
T ss_pred             hhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccc
Confidence            78899999999999999999999998644 3344556666666665444333

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.51  E-value=4.9e-08  Score=84.38  Aligned_cols=66  Identities=18%  Similarity=0.212  Sum_probs=56.2

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccC--eEEEcccc-----------CCCCCChHHHHHhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLS--WTFCSCVI-----------GMFSKQCLKERGNLI  200 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD--~v~~S~ev-----------g~~KPdPeiy~~~~~  200 (207)
                      |.||+.++|+.|+++|++++++||.+.. ...+++++|+.+||+  .+++++++           +..||+|++|..++.
T Consensus       216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~  295 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALY  295 (380)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHH
T ss_pred             chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHH
Confidence            5679999999999999999999999854 555789999999997  46666554           789999999998864

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.29  E-value=6.5e-07  Score=71.29  Aligned_cols=68  Identities=4%  Similarity=-0.137  Sum_probs=47.5

Q ss_pred             CCcchhHHHHHHHHhHCCCeEEEEcCcHH----------------HHHHHHHhCCcccccCeEEEcc------------c
Q 028576          133 YAYLDGVEELLHELKQSNYEMHAFTNYPI----------------WYEIIEDKLKISTYLSWTFCSC------------V  184 (207)
Q Consensus       133 ~~~~pgv~elL~~Lk~~G~kl~IlTN~~~----------------~~~~il~~~~l~~yFD~v~~S~------------e  184 (207)
                      +.++||+.++|++|+++||+++|+||.+.                .+...++..|+  +++.++.+.            +
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~~~~~  124 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FVDMVLACAYHEAGVGPLAIPD  124 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CCSEEEEECCCTTCCSTTCCSS
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc--ccceEEEecccccccccccccc
Confidence            35889999999999999999999999531                11222334443  345444442            3


Q ss_pred             cCCCCCChHHHHHhhhhh
Q 028576          185 IGMFSKQCLKERGNLILI  202 (207)
Q Consensus       185 vg~~KPdPeiy~~~~~~~  202 (207)
                      ...+||+|+++..|+...
T Consensus       125 ~~~rKP~p~ml~~a~~~~  142 (209)
T d2o2xa1         125 HPMRKPNPGMLVEAGKRL  142 (209)
T ss_dssp             CTTSTTSCHHHHHHHHHH
T ss_pred             cccccccchhhhHhHHHh
Confidence            345799999999998654

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=1.8e-06  Score=69.37  Aligned_cols=47  Identities=21%  Similarity=0.216  Sum_probs=28.1

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S  182 (207)
                      +|++.+.++.|+++|+++.++||.+    ..+.+.+..+|+.-..+.|+.|
T Consensus        21 i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~~~i~~~   71 (250)
T d2c4na1          21 VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS   71 (250)
T ss_dssp             CTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred             CccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccceeEech
Confidence            4566677777788888888888753    2333334556654333444443

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.03  E-value=1.2e-07  Score=76.59  Aligned_cols=64  Identities=13%  Similarity=-0.127  Sum_probs=36.1

Q ss_pred             HHHHHHhHCCCeEEEEcCcHHHHHH----HHHhCCcccccCeEEEccccCCCCCChHHHHHhhhhhhc
Q 028576          141 ELLHELKQSNYEMHAFTNYPIWYEI----IEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLILIFI  204 (207)
Q Consensus       141 elL~~Lk~~G~kl~IlTN~~~~~~~----il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~~~~~  204 (207)
                      ..+..+..++....|+||....+..    ......+..+++...+++.+...||+|++|+.|+..+=+
T Consensus       128 ~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i  195 (253)
T d1wvia_         128 LTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGV  195 (253)
T ss_dssp             HHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTS
T ss_pred             HHHHhhhhhhccccccCCCCceeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhccc
Confidence            3344444556778899997321110    000111223334444455566679999999999987643

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.00  E-value=1.9e-05  Score=59.59  Aligned_cols=108  Identities=13%  Similarity=0.149  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCcccCCChhchHHHHHcCCHHHHHHhhCchHHHHHHhCCCCHHHHHHHHhhc--CCCCCHHHHHHHHHhcC
Q 028576           56 LPILLFDIMDTIVRDPFYHDVPAFFGMSMKELIECKHPNAWIEFEMGMISEMELARKFFTD--GRPFDLEGLKICMKKGY  133 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~~~~~~l~~~~g~~~~~~~~~~~~~~w~~~e~G~Is~~e~~~~~~~~--g~~~~~~~l~~~~~~~~  133 (207)
                      ++.|+|||||||+|+.+ ..+....|+           .......||.++-.++.+...+.  +.......+.. .....
T Consensus         2 mkli~fDlDGTLl~e~~-~~~a~~~Gi-----------~~~~~tgR~~~~~~~~~~~~v~ll~~~~~~~~~~~~-~~~~~   68 (206)
T d1rkua_           2 MEIACLDLEGVLVPEIW-IAFAEKTGI-----------DALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQE-VIATL   68 (206)
T ss_dssp             CEEEEEESBTTTBCCHH-HHHHHHHTC-----------GGGGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHH-HHTTC
T ss_pred             cEEEEEcCccchHHHHH-HHHHHHcCC-----------HHHHHHCCCCCCHHHHHHHHHHHHHhCCCceehhhh-hhhhc
Confidence            47899999999998522 122222243           11223345667766666543321  11222232222 22344


Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccC
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLS  177 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD  177 (207)
                      ...++....+..++ .+++++++|.+... ........+...++.
T Consensus        69 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  112 (206)
T d1rkua_          69 KPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLC  112 (206)
T ss_dssp             CCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEE
T ss_pred             cccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhc
Confidence            66788888887765 67999999998644 334556666655544

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=97.95  E-value=5.5e-06  Score=66.42  Aligned_cols=48  Identities=25%  Similarity=0.180  Sum_probs=31.7

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHHHhCCcccccCeEEEc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il~~~~l~~yFD~v~~S  182 (207)
                      .+|++.++|+.|+++|.++.++||..    ......+..+|+.-..+.+++|
T Consensus        24 ~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~~~v~ts   75 (261)
T d1vjra_          24 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTS   75 (261)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred             cCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccccceeccH
Confidence            34677778888888888888888852    2333344566765555666665

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=2.5e-05  Score=62.09  Aligned_cols=46  Identities=9%  Similarity=0.036  Sum_probs=34.3

Q ss_pred             hhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcccccCeEEEc
Q 028576          137 DGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYLSWTFCS  182 (207)
Q Consensus       137 pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yFD~v~~S  182 (207)
                      |.+.++|++|+++|++++++|..+ .....+++.+++...+++++++
T Consensus        24 ~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~   70 (271)
T d1rkqa_          24 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITY   70 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEG
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEc
Confidence            455667888999999999999965 5566666788886656666543

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.69  E-value=3.4e-05  Score=61.50  Aligned_cols=48  Identities=10%  Similarity=0.160  Sum_probs=31.2

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcH----HHHHH-HHHhCCcccccCeEEEcc
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYP----IWYEI-IEDKLKISTYLSWTFCSC  183 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~-il~~~~l~~yFD~v~~S~  183 (207)
                      +|++.+.|++|+++|+++.++||.+    ..... +...+++.-..+.+++|.
T Consensus        20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~~~i~~~~   72 (253)
T d1yv9a1          20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTAT   72 (253)
T ss_dssp             CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHH
T ss_pred             CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCccccccccCHH
Confidence            3677788888999999999999843    22222 334556554455666553

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=7.7e-05  Score=62.01  Aligned_cols=51  Identities=16%  Similarity=0.119  Sum_probs=39.7

Q ss_pred             HHHHHHHHh-cCCcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcc
Q 028576          123 EGLKICMKK-GYAYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIS  173 (207)
Q Consensus       123 ~~l~~~~~~-~~~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~  173 (207)
                      +++.+.... ...+.||+.++++.|+++|++++|+|.+... .+.+++++++.
T Consensus       123 ~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~  175 (291)
T d2bdua1         123 AKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVY  175 (291)
T ss_dssp             GGHHHHHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCC
Confidence            444444443 4678899999999999999999999999754 55577888764

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.34  E-value=0.00043  Score=50.39  Aligned_cols=46  Identities=22%  Similarity=0.060  Sum_probs=34.8

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH------------H-H---HHHHHHhCCcccccCeEEE
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP------------I-W---YEIIEDKLKISTYLSWTFC  181 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~------------~-~---~~~il~~~~l~~yFD~v~~  181 (207)
                      .|++++.+.|..|+++|+++.|.|...            . .   ....|+..|+ + ||.++.
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI-~-Yd~Li~   85 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV-P-YDEILV   85 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC-C-CSEEEE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC-C-ceEEEE
Confidence            478999999999999999999999852            1 1   2224577787 4 477765

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=7.2e-05  Score=57.54  Aligned_cols=29  Identities=17%  Similarity=0.142  Sum_probs=24.1

Q ss_pred             cCCcchhHHHHHHHHhHCC-CeEEEEcCcH
Q 028576          132 GYAYLDGVEELLHELKQSN-YEMHAFTNYP  160 (207)
Q Consensus       132 ~~~~~pgv~elL~~Lk~~G-~kl~IlTN~~  160 (207)
                      ...++||+.++|+.|++.| +.+.++|..+
T Consensus        72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          72 ELEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             hCCcccCHHHHHHHHhhccCccceEEcccc
Confidence            4578999999999999865 5788999864

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=5.9e-05  Score=59.93  Aligned_cols=27  Identities=7%  Similarity=-0.025  Sum_probs=24.8

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP  160 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~  160 (207)
                      .+.||+.++++.++++|++|..+||-.
T Consensus        86 ~p~pga~~fl~~~~~~Gv~IfyVTnR~  112 (209)
T d2b82a1          86 IPKEVARQLIDMHVRRGDAIFFVTGRS  112 (209)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSC
T ss_pred             CcchhHHHHHHHHHHcCCeEEEEeCCc
Confidence            577999999999999999999999963

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.27  E-value=0.00027  Score=53.92  Aligned_cols=15  Identities=33%  Similarity=0.375  Sum_probs=13.8

Q ss_pred             CCCeEEEEcCCcccC
Q 028576           55 KLPILLFDIMDTIVR   69 (207)
Q Consensus        55 ~~~~IlFDLDGTLvD   69 (207)
                      |+|.|+||+||||++
T Consensus         1 kiK~i~~D~DGTL~~   15 (230)
T d1wr8a_           1 KIKAISIDIDGTITY   15 (230)
T ss_dssp             CCCEEEEESTTTTBC
T ss_pred             CceEEEEecCCCCcC
Confidence            678999999999987

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.23  E-value=0.00035  Score=55.50  Aligned_cols=36  Identities=19%  Similarity=0.100  Sum_probs=23.0

Q ss_pred             hHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          138 GVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       138 gv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      .+.+.|++|+++|++++++|..+ .....+++.+++.
T Consensus        22 ~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~   58 (285)
T d1nrwa_          22 ENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK   58 (285)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCC
Confidence            45556667777777777777754 4455555666654

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.78  E-value=0.0011  Score=51.63  Aligned_cols=64  Identities=16%  Similarity=0.038  Sum_probs=48.5

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH---------HHH----HHHHHhCCcccccCeEEEccccCCCCCChHHHHHhhh
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP---------IWY----EIIEDKLKISTYLSWTFCSCVIGMFSKQCLKERGNLI  200 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~---------~~~----~~il~~~~l~~yFD~v~~S~evg~~KPdPeiy~~~~~  200 (207)
                      ++|++.+.|+.|+++||.+.|+||.+         ..+    +.+++.++.  .++..++...-..+||.|..+..++.
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~--~~~i~~~~~~~~~RKP~~GM~~~~~~  127 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV--PFQVLVATHAGLNRKPVSGMWDHLQE  127 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTS--CCEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCC--CccEEEecCccccCCCccHHHHHHHH
Confidence            46999999999999999999999953         122    224455554  34566666777889999999988764

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0021  Score=48.63  Aligned_cols=35  Identities=11%  Similarity=0.142  Sum_probs=24.3

Q ss_pred             HHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCcc
Q 028576          139 VEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKIS  173 (207)
Q Consensus       139 v~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~  173 (207)
                      +.++|++|+++|++++++|..+ .......+.+++.
T Consensus        26 ~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~   61 (232)
T d1xvia_          26 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ   61 (232)
T ss_dssp             THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence            4456777888888888888865 4455555666664

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.48  E-value=0.0013  Score=50.58  Aligned_cols=14  Identities=7%  Similarity=0.268  Sum_probs=12.7

Q ss_pred             CCeEEEEcCCcccC
Q 028576           56 LPILLFDIMDTIVR   69 (207)
Q Consensus        56 ~~~IlFDLDGTLvD   69 (207)
                      +|.|+||+||||+|
T Consensus         3 iKli~~D~DGTL~~   16 (225)
T d1l6ra_           3 IRLAAIDVDGNLTD   16 (225)
T ss_dssp             CCEEEEEHHHHSBC
T ss_pred             eEEEEEecCCCCcC
Confidence            47999999999997

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=96.43  E-value=0.0012  Score=51.84  Aligned_cols=15  Identities=20%  Similarity=0.474  Sum_probs=13.0

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      +|.|+||+||||+++
T Consensus         2 IKli~~DlDGTLl~~   16 (269)
T d1rlma_           2 VKVIVTDMDGTFLND   16 (269)
T ss_dssp             CCEEEECCCCCCSCT
T ss_pred             EEEEEEeCCccCcCC
Confidence            578999999999873

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.0052  Score=46.48  Aligned_cols=14  Identities=29%  Similarity=0.475  Sum_probs=12.6

Q ss_pred             CCeEEEEcCCcccC
Q 028576           56 LPILLFDIMDTIVR   69 (207)
Q Consensus        56 ~~~IlFDLDGTLvD   69 (207)
                      .+.++||+||||++
T Consensus         3 ~kl~~fDlDGTLl~   16 (243)
T d2amya1           3 PALCLFDVDGTLTA   16 (243)
T ss_dssp             SEEEEEESBTTTBC
T ss_pred             CEEEEEcCcCCeeC
Confidence            46899999999998

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=93.68  E-value=0.013  Score=45.55  Aligned_cols=16  Identities=25%  Similarity=0.420  Sum_probs=14.1

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      .++|.|+||+||||+.
T Consensus         8 ~~ikli~~DlDGTLl~   23 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFV   23 (283)
T ss_dssp             CCCCEEEEETBTTTBC
T ss_pred             cCccEEEEECCCCCcC
Confidence            6778999999999984

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=93.58  E-value=0.022  Score=49.56  Aligned_cols=55  Identities=11%  Similarity=-0.054  Sum_probs=40.9

Q ss_pred             chhHHHHHHHHhHCCCeEEEEcCcHHHHHH-----HHH-----hCCcccccCeEEEccccCCCCCChHHHH
Q 028576          136 LDGVEELLHELKQSNYEMHAFTNYPIWYEI-----IED-----KLKISTYLSWTFCSCVIGMFSKQCLKER  196 (207)
Q Consensus       136 ~pgv~elL~~Lk~~G~kl~IlTN~~~~~~~-----il~-----~~~l~~yFD~v~~S~evg~~KPdPeiy~  196 (207)
                      -|.+..+|+.|++.|-++.++||++-++..     ++.     .-...+|||.||++    ..||  ..|.
T Consensus       187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~----A~KP--~FF~  251 (458)
T d2bdea1         187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITL----ANKP--RFFY  251 (458)
T ss_dssp             CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEES----CCHH--HHHH
T ss_pred             ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeC----CCCC--CccC
Confidence            478899999999999999999999744332     221     23778899999954    4774  4553

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.013  Score=43.93  Aligned_cols=12  Identities=33%  Similarity=0.600  Sum_probs=10.2

Q ss_pred             eEEEEcCCcccC
Q 028576           58 ILLFDIMDTIVR   69 (207)
Q Consensus        58 ~IlFDLDGTLvD   69 (207)
                      .++|||||||++
T Consensus         3 i~lFDlDGTLl~   14 (244)
T d2fuea1           3 LCLFDVDGTLTP   14 (244)
T ss_dssp             EEEEESBTTTBS
T ss_pred             EEEEccccCccC
Confidence            356999999998

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=93.04  E-value=0.017  Score=45.22  Aligned_cols=14  Identities=21%  Similarity=0.596  Sum_probs=13.0

Q ss_pred             CCeEEEEcCCcccC
Q 028576           56 LPILLFDIMDTIVR   69 (207)
Q Consensus        56 ~~~IlFDLDGTLvD   69 (207)
                      ||.|+||+||||++
T Consensus         2 ~Kli~~DlDGTL~~   15 (267)
T d1nf2a_           2 YRVFVFDLDGTLLN   15 (267)
T ss_dssp             BCEEEEECCCCCSC
T ss_pred             eEEEEEeCCccccC
Confidence            57999999999998

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=92.74  E-value=0.015  Score=45.24  Aligned_cols=13  Identities=46%  Similarity=0.664  Sum_probs=12.0

Q ss_pred             CeEEEEcCCcccC
Q 028576           57 PILLFDIMDTIVR   69 (207)
Q Consensus        57 ~~IlFDLDGTLvD   69 (207)
                      |+|+||+||||++
T Consensus         2 k~if~DlDGTL~~   14 (260)
T d2rbka1           2 KALFFDIDGTLVS   14 (260)
T ss_dssp             CEEEECSBTTTBC
T ss_pred             eEEEEECCCCCcC
Confidence            5899999999997

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.00  E-value=0.017  Score=43.72  Aligned_cols=14  Identities=21%  Similarity=0.600  Sum_probs=12.7

Q ss_pred             CCeEEEEcCCcccC
Q 028576           56 LPILLFDIMDTIVR   69 (207)
Q Consensus        56 ~~~IlFDLDGTLvD   69 (207)
                      +|.|+||+||||++
T Consensus         2 iKli~~DlDGTLl~   15 (243)
T d1wzca1           2 IRLIFLDIDKTLIP   15 (243)
T ss_dssp             EEEEEECCBTTTBS
T ss_pred             cEEEEEeCCCCCCC
Confidence            46899999999998

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.84  E-value=0.079  Score=38.18  Aligned_cols=43  Identities=16%  Similarity=0.189  Sum_probs=33.6

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcH-HHHHHHHHhCCccccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYP-IWYEIIEDKLKISTYL  176 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~-~~~~~il~~~~l~~yF  176 (207)
                      .+.|++.+.++.|++.|+++.++|.-. .....+-+.+|+..+|
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~   64 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI   64 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc
Confidence            467899999999999999999999865 3344566778875433

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.60  E-value=0.028  Score=41.86  Aligned_cols=12  Identities=25%  Similarity=0.515  Sum_probs=10.9

Q ss_pred             eEEEEcCCcccC
Q 028576           58 ILLFDIMDTIVR   69 (207)
Q Consensus        58 ~IlFDLDGTLvD   69 (207)
                      .|+||+||||++
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            589999999996

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=91.39  E-value=0.029  Score=43.02  Aligned_cols=17  Identities=29%  Similarity=0.362  Sum_probs=13.0

Q ss_pred             CCCCeEEEEcCCcccCC
Q 028576           54 RKLPILLFDIMDTIVRD   70 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD~   70 (207)
                      |+-..|+||+||||++.
T Consensus         1 m~~~li~~DlDGTL~~~   17 (244)
T d1s2oa1           1 MRQLLLISDLDNTWVGD   17 (244)
T ss_dssp             CCSEEEEECTBTTTBSC
T ss_pred             CCceEEEEECcccCCCC
Confidence            34346778999999984

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=90.97  E-value=0.097  Score=37.11  Aligned_cols=60  Identities=7%  Similarity=-0.254  Sum_probs=38.3

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HH---HHHHhCCcccccCeE-------EEccccCCCCCChHHH
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YE---IIEDKLKISTYLSWT-------FCSCVIGMFSKQCLKE  195 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~---~il~~~~l~~yFD~v-------~~S~evg~~KPdPeiy  195 (207)
                      .|+|++.+.|+.|+++|+++.+.|.-+.. .+   ..+++.++.  ||.+       +--.++..+||..+.|
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i~~~~~~~~~~~~~~~~Kp~ad~y   91 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAANKDYPEEERDHQGFSRKLKADLF   91 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEESSSSTTC---CCSCCSSCCCSEE
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceehhccCccCccccceecCCccccEE
Confidence            47899999999999999999999986432 22   234555541  3332       2234455668776544

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=89.84  E-value=0.045  Score=42.19  Aligned_cols=16  Identities=38%  Similarity=0.422  Sum_probs=13.6

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      .++++|+||+||||+.
T Consensus        21 ~~~~Aif~DrDGtl~~   36 (209)
T d2o2xa1          21 PHLPALFLDRDGTINV   36 (209)
T ss_dssp             SSCCCEEECSBTTTBC
T ss_pred             CCCCEEEEeCCCCeEC
Confidence            4457999999999986

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=88.75  E-value=0.063  Score=44.88  Aligned_cols=15  Identities=20%  Similarity=0.536  Sum_probs=13.3

Q ss_pred             CCeEEEEcCCcccCC
Q 028576           56 LPILLFDIMDTIVRD   70 (207)
Q Consensus        56 ~~~IlFDLDGTLvD~   70 (207)
                      ++.|+||+||||++.
T Consensus         1 ~~~i~fd~dGVll~~   15 (380)
T d1qyia_           1 MKKILFDVDGVFLSE   15 (380)
T ss_dssp             CCEEEECSBTTTBCS
T ss_pred             CceEEEeCCcEEEcc
Confidence            468999999999994

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=87.08  E-value=0.11  Score=38.97  Aligned_cols=16  Identities=6%  Similarity=0.297  Sum_probs=14.3

Q ss_pred             CCCCeEEEEcCCcccC
Q 028576           54 RKLPILLFDIMDTIVR   69 (207)
Q Consensus        54 ~~~~~IlFDLDGTLvD   69 (207)
                      .+++.++||+||||.|
T Consensus         3 ~~ik~~i~DvDGVlTD   18 (177)
T d1k1ea_           3 ENIKFVITDVDGVLTD   18 (177)
T ss_dssp             GGCCEEEEECTTTTSC
T ss_pred             ccCeEEEEccCCcccC
Confidence            4578999999999998

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=86.43  E-value=0.32  Score=37.38  Aligned_cols=49  Identities=14%  Similarity=0.158  Sum_probs=35.1

Q ss_pred             cchhHHHHHHHHhHCCCeEEEEcCcH----HHHHHHH-HhCCcccccCeEEEcc
Q 028576          135 YLDGVEELLHELKQSNYEMHAFTNYP----IWYEIIE-DKLKISTYLSWTFCSC  183 (207)
Q Consensus       135 ~~pgv~elL~~Lk~~G~kl~IlTN~~----~~~~~il-~~~~l~~yFD~v~~S~  183 (207)
                      ++|++.++++.|+++|++++++||..    ..+.+.+ ..+++....+.++.|.
T Consensus        19 ~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~~~~i~~~~   72 (253)
T d1wvia_          19 RIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTPLETIYTAT   72 (253)
T ss_dssp             ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCCGGGEEEHH
T ss_pred             cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCccccccccccHH
Confidence            56899999999999999999999952    3344433 3456655566676653

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=82.88  E-value=0.83  Score=33.55  Aligned_cols=40  Identities=10%  Similarity=-0.071  Sum_probs=32.1

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKIS  173 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~  173 (207)
                      .+.|++.+.++.|++.|+++.++|.-... ...+.+.+|+.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~   60 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF   60 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSS
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCC
Confidence            45689999999999999999999997543 44466777774

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=82.60  E-value=0.22  Score=35.13  Aligned_cols=13  Identities=31%  Similarity=0.376  Sum_probs=11.4

Q ss_pred             eEEEEcCCcccCC
Q 028576           58 ILLFDIMDTIVRD   70 (207)
Q Consensus        58 ~IlFDLDGTLvD~   70 (207)
                      .|+||+||||...
T Consensus         2 ti~vDiDGTl~~~   14 (122)
T d2obba1           2 TIAVDFDGTIVEH   14 (122)
T ss_dssp             EEEECCBTTTBCS
T ss_pred             EEEEEcCCCcCCC
Confidence            5899999999873

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.62  E-value=0.63  Score=34.48  Aligned_cols=50  Identities=16%  Similarity=0.074  Sum_probs=38.1

Q ss_pred             CcchhHHHHHHHHhHCCCeEEEEcCcHHH-HHHHHHhCCcccccCeEEEccc
Q 028576          134 AYLDGVEELLHELKQSNYEMHAFTNYPIW-YEIIEDKLKISTYLSWTFCSCV  184 (207)
Q Consensus       134 ~~~pgv~elL~~Lk~~G~kl~IlTN~~~~-~~~il~~~~l~~yFD~v~~S~e  184 (207)
                      ...||+.++|+++.+. |.|+|-|.+... +..+++.+.-..+|...+..+.
T Consensus        55 ~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~  105 (181)
T d1ta0a_          55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRES  105 (181)
T ss_dssp             EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGG
T ss_pred             ecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeee
Confidence            3569999999999875 999999999754 5557777766666766665544