Query 028577
Match_columns 207
No_of_seqs 244 out of 1747
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 22:58:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028577.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028577hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.9 1.7E-25 5.8E-30 179.1 13.1 95 108-204 57-160 (161)
2 1gme_A Heat shock protein 16.9 99.9 8.8E-25 3E-29 173.5 14.0 101 105-207 41-150 (151)
3 3gla_A Low molecular weight he 99.9 4E-24 1.4E-28 157.9 13.9 90 105-195 2-99 (100)
4 4fei_A Heat shock protein-rela 99.9 6.8E-24 2.3E-28 157.7 13.9 91 105-196 4-97 (102)
5 3aab_A Putative uncharacterize 99.9 1.4E-24 4.7E-29 166.5 9.6 107 87-196 5-118 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 2.8E-23 9.7E-28 155.7 13.3 95 109-204 4-104 (106)
7 2wj5_A Heat shock protein beta 99.9 6E-23 2.1E-27 152.6 11.3 96 109-206 3-100 (101)
8 2klr_A Alpha-crystallin B chai 99.9 2.9E-23 9.9E-28 168.7 10.4 97 109-206 65-163 (175)
9 3q9p_A Heat shock protein beta 99.9 2.6E-22 8.9E-27 144.7 11.2 82 112-194 2-85 (85)
10 2bol_A TSP36, small heat shock 99.9 3.1E-21 1.1E-25 169.4 15.1 97 105-204 96-197 (314)
11 2y1y_A Alpha-crystallin B chai 99.9 4.1E-21 1.4E-25 139.7 11.0 83 113-196 2-86 (90)
12 2bol_A TSP36, small heat shock 99.8 1.4E-18 4.7E-23 152.7 9.2 86 108-194 221-314 (314)
13 2xcm_C SGT1-like protein, cyto 99.0 1.1E-09 3.7E-14 78.6 8.8 81 107-195 2-82 (92)
14 1rl1_A Suppressor of G2 allele 99.0 1.3E-09 4.5E-14 81.4 9.6 82 106-195 8-89 (114)
15 3eud_A Protein SHQ1; CS domain 98.4 3.5E-06 1.2E-10 63.2 10.6 79 106-196 16-98 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.3 8.7E-07 3E-11 68.5 5.8 78 106-195 2-83 (134)
17 3igf_A ALL4481 protein; two-do 98.3 3.4E-06 1.2E-10 75.4 9.6 73 107-193 297-369 (374)
18 1x5m_A Calcyclin-binding prote 97.9 0.00014 4.7E-09 55.2 11.7 81 107-195 20-104 (127)
19 1wgv_A KIAA1068 protein; CS do 97.9 0.00021 7.1E-09 54.0 11.6 84 104-195 16-102 (124)
20 3qor_A Nuclear migration prote 97.8 0.00023 7.8E-09 53.6 10.9 81 104-195 13-97 (121)
21 1wfi_A Nuclear distribution ge 97.8 0.00011 3.6E-09 56.1 8.3 81 104-195 4-88 (131)
22 1wh0_A Ubiquitin carboxyl-term 97.7 0.00023 8E-09 54.8 9.5 88 107-195 19-112 (134)
23 1ejf_A Progesterone receptor P 97.6 0.00035 1.2E-08 52.8 9.6 78 109-195 5-82 (125)
24 2o30_A Nuclear movement protei 97.6 0.00058 2E-08 52.0 9.8 76 107-194 4-80 (131)
25 2rh0_A NUDC domain-containing 97.5 0.00096 3.3E-08 52.5 10.9 78 106-195 12-91 (157)
26 2kmw_A Uncharacterized protein 97.2 0.0008 2.7E-08 52.7 7.1 78 107-195 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.1 0.0003 1E-08 54.0 3.1 84 107-194 6-97 (134)
28 4fei_A Heat shock protein-rela 79.0 7.2 0.00025 27.4 6.8 34 118-151 62-96 (102)
29 3q9p_A Heat shock protein beta 67.3 10 0.00036 25.7 5.1 31 118-148 51-83 (85)
30 3gla_A Low molecular weight he 67.2 9.4 0.00032 26.5 5.0 33 117-149 64-97 (100)
31 4eld_A MJ16.5-P1, small heat s 64.7 13 0.00043 28.4 5.7 34 117-150 117-151 (161)
32 2cql_A OK/SW-CL.103, 60S ribos 62.7 19 0.00063 25.7 5.8 45 130-192 20-68 (100)
33 2wj5_A Heat shock protein beta 60.7 12 0.00042 26.2 4.6 32 119-150 56-89 (101)
34 2y1y_A Alpha-crystallin B chai 60.6 12 0.0004 25.7 4.3 31 119-149 51-83 (90)
35 3l1e_A Alpha-crystallin A chai 59.5 15 0.00051 26.1 4.8 33 119-151 57-91 (106)
36 1gme_A Heat shock protein 16.9 58.0 21 0.00073 26.9 5.8 33 118-150 105-138 (151)
37 2nwt_A UPF0165 protein AF_2212 55.8 13 0.00044 25.0 3.6 15 175-189 3-17 (69)
38 1rl6_A Protein (ribosomal prot 54.7 33 0.0011 27.0 6.5 45 130-192 11-55 (177)
39 1nkw_E 50S ribosomal protein L 50.3 39 0.0013 27.4 6.4 46 130-193 39-84 (212)
40 1vq8_E 50S ribosomal protein L 49.9 16 0.00056 28.8 4.0 46 130-192 9-54 (178)
41 3v2d_H 50S ribosomal protein L 49.1 31 0.001 27.2 5.5 44 130-191 12-55 (180)
42 3jx8_A Putative lipoprotein; s 48.1 71 0.0024 25.7 7.9 36 112-147 36-71 (250)
43 2klr_A Alpha-crystallin B chai 43.7 25 0.00084 27.5 4.1 31 119-149 118-150 (175)
44 3pet_A Putative adhesin; right 42.8 37 0.0013 27.0 5.2 72 112-206 5-85 (221)
45 1rl1_A Suppressor of G2 allele 41.6 35 0.0012 24.0 4.4 34 116-149 53-87 (114)
46 3aab_A Putative uncharacterize 40.7 62 0.0021 23.1 5.8 34 160-195 35-69 (123)
47 3iz5_F 60S ribosomal protein L 39.8 31 0.001 27.5 4.2 46 130-192 13-60 (190)
48 3j21_F 50S ribosomal protein L 37.9 29 0.00098 27.5 3.7 45 130-191 14-58 (184)
49 3ljy_A Putative adhesin; struc 34.6 1.3E+02 0.0044 24.1 7.3 58 112-192 6-71 (243)
50 3u5e_H L8, RP24, YL11, 60S rib 33.6 68 0.0023 25.4 5.3 46 130-192 13-59 (191)
51 2ks0_A Uncharacterized protein 33.2 22 0.00074 23.9 1.9 22 127-148 17-38 (71)
52 3bbo_I Ribosomal protein L6; l 32.1 23 0.0008 29.0 2.3 45 130-192 54-99 (223)
53 2gjh_A Designed protein; oblig 32.0 33 0.0011 21.6 2.5 23 128-150 30-52 (62)
54 2zkr_e 60S ribosomal protein L 29.8 94 0.0032 24.6 5.5 47 129-192 12-61 (192)
55 1ew4_A CYAY protein; friedreic 27.7 33 0.0011 24.6 2.3 17 176-192 29-45 (106)
56 3jx8_A Putative lipoprotein; s 27.0 78 0.0027 25.4 4.8 43 106-148 53-107 (250)
57 1n91_A ORF, hypothetical prote 26.9 96 0.0033 22.3 4.7 38 112-150 8-46 (108)
58 3ug3_A Alpha-L-arabinofuranosi 26.7 65 0.0022 29.4 4.5 35 167-207 470-504 (504)
59 1qys_A TOP7; alpha-beta, novel 23.2 88 0.003 21.5 3.6 23 127-149 73-95 (106)
60 3r8s_G 50S ribosomal protein L 22.4 39 0.0013 26.5 1.9 42 130-189 11-52 (176)
61 3oeq_A Frataxin homolog, mitoc 21.9 63 0.0022 23.9 2.9 16 177-192 49-64 (123)
62 3qqz_A Putative uncharacterize 21.6 2.6E+02 0.0089 22.6 7.0 68 119-189 13-86 (255)
63 2kgs_A Uncharacterized protein 21.1 77 0.0026 23.2 3.3 65 125-189 2-91 (132)
64 2o30_A Nuclear movement protei 20.8 1.3E+02 0.0044 21.8 4.5 29 161-190 16-44 (131)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=1.7e-25 Score=179.10 Aligned_cols=95 Identities=24% Similarity=0.332 Sum_probs=81.9
Q ss_pred ceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccccc--------ce-eeeEEEEEEECCCCCCCCCceE
Q 028577 108 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG--------EE-SVRRYTSRIDLPEKLYRTDQIK 178 (207)
Q Consensus 108 p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~--------e~-~~~~f~r~i~LP~~v~d~~~ik 178 (207)
+++||+|++++|+|+++|||++++||+|+++++.|+|+|+++.+.+. ++ .++.|+|+|.||.+| |.++|+
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~v-d~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATV-KEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCB-CGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCc-ccccEE
Confidence 34999999999999999999999999999999999999998764221 33 567999999999999 999999
Q ss_pred EEEeCCEEEEEEeCcCcccCCceeEe
Q 028577 179 AEMKNGVLKVTVPKVKEEERADVFQV 204 (207)
Q Consensus 179 A~~~nGvL~I~lPK~~~~~~~~~i~I 204 (207)
|+|+||||+|++||.+.. +++.|+|
T Consensus 136 A~~~nGvL~I~lpK~~~~-~~r~I~I 160 (161)
T 4eld_A 136 AKFENGVLSVILPKAESS-IKKGINI 160 (161)
T ss_dssp EEEETTEEEEEEEBCGGG-SCCCCCC
T ss_pred EEEECCEEEEEEEcCCCC-CCcEeec
Confidence 999999999999998554 3445544
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.92 E-value=8.8e-25 Score=173.50 Aligned_cols=101 Identities=38% Similarity=0.575 Sum_probs=86.1
Q ss_pred CccceeeEEEcCCeEEEEEEcCCCCccceEEEEE-CCEEEEEeeecccccc--------ceeeeEEEEEEECCCCCCCCC
Q 028577 105 GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLE-QNTLVIRGEGGKEGEG--------EESVRRYTSRIDLPEKLYRTD 175 (207)
Q Consensus 105 ~~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~-~~~L~I~g~~~~~~~~--------e~~~~~f~r~i~LP~~v~d~~ 175 (207)
.+.|++||+|++++|+|.++|||++++||+|+++ ++.|+|+|+++.+.+. |+.++.|+|+|.||.+| +.+
T Consensus 41 ~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~ 119 (151)
T 1gme_A 41 FANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDA-KVE 119 (151)
T ss_dssp HGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCC-CGG
T ss_pred ccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCc-ccc
Confidence 3679999999999999999999999999999995 6899999998765432 33467899999999999 999
Q ss_pred ceEEEEeCCEEEEEEeCcCcccCCceeEeecC
Q 028577 176 QIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 207 (207)
Q Consensus 176 ~ikA~~~nGvL~I~lPK~~~~~~~~~i~I~Ie 207 (207)
.|+|+|+||+|+|++||..+. +++.+.|+|+
T Consensus 120 ~i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 120 EVKAGLENGVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp GCEEEEETTEEEEEEECCCCC-TTCCCCCCCC
T ss_pred ceEEEEECCEEEEEEEccCcC-CCCCeEeeeC
Confidence 999999999999999998654 3445566653
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.92 E-value=4e-24 Score=157.93 Aligned_cols=90 Identities=30% Similarity=0.488 Sum_probs=80.5
Q ss_pred CccceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccccc--------ceeeeEEEEEEECCCCCCCCCc
Q 028577 105 GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG--------EESVRRYTSRIDLPEKLYRTDQ 176 (207)
Q Consensus 105 ~~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~--------e~~~~~f~r~i~LP~~v~d~~~ 176 (207)
.+.|++||+|++++|+|.++|||++++||+|+++++.|+|+|++..+.+. ++..+.|+|+|.||.++ |.+.
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~v-d~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSA-DADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTB-CTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCc-ChHH
Confidence 37899999999999999999999999999999999999999998765432 34567999999999999 9999
Q ss_pred eEEEEeCCEEEEEEeCcCc
Q 028577 177 IKAEMKNGVLKVTVPKVKE 195 (207)
Q Consensus 177 ikA~~~nGvL~I~lPK~~~ 195 (207)
|+|+|+||+|+|++||.++
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999854
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.91 E-value=6.8e-24 Score=157.74 Aligned_cols=91 Identities=22% Similarity=0.389 Sum_probs=82.4
Q ss_pred CccceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeeccccc---cceeeeEEEEEEECCCCCCCCCceEEEE
Q 028577 105 GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGE---GEESVRRYTSRIDLPEKLYRTDQIKAEM 181 (207)
Q Consensus 105 ~~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~---~e~~~~~f~r~i~LP~~v~d~~~ikA~~ 181 (207)
.+.|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+.. .++..+.|.|+|.||.++ |.+.|+|+|
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~v-d~~~i~A~~ 82 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPV-RPASGVASL 82 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCB-CTTCCEEEE
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCc-chhHcEEEE
Confidence 4789999999999999999999999999999999999999999864322 155778999999999999 999999999
Q ss_pred eCCEEEEEEeCcCcc
Q 028577 182 KNGVLKVTVPKVKEE 196 (207)
Q Consensus 182 ~nGvL~I~lPK~~~~ 196 (207)
+||+|+|++||.++.
T Consensus 83 ~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 83 AGGVLTVRFEKLRPT 97 (102)
T ss_dssp ETTEEEEEEEBSSCC
T ss_pred ECCEEEEEEEccCcc
Confidence 999999999998654
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.91 E-value=1.4e-24 Score=166.54 Aligned_cols=107 Identities=21% Similarity=0.239 Sum_probs=81.6
Q ss_pred HHHHHHhhcCCCCCCCCCCccceeeEEEcCCeEEEEEEcCCCCccceEEEEEC-CEEEEEeeecccccc-----ceeeeE
Q 028577 87 LNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQ-NTLVIRGEGGKEGEG-----EESVRR 160 (207)
Q Consensus 87 ~~~md~~~~~~~~~~~~~~~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~-~~L~I~g~~~~~~~~-----e~~~~~ 160 (207)
+++|+++|++.+.... ..+.|++||+|++++|.|.++|||++++||+|++++ +.|+|+|+++.+.+. ++.+ .
T Consensus 5 ~~em~~~~~~~~~~~~-~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~-~ 82 (123)
T 3aab_A 5 GKELQKRSEELSRGFY-ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK-Y 82 (123)
T ss_dssp ---------CCCHHHH-HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-E
T ss_pred HHHHHHHHHHHhhhcc-ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-E
Confidence 3444444444332111 124689999999999999999999999999999999 999999998765421 2334 8
Q ss_pred EEEEEECCCCCCCCCce-EEEEeCCEEEEEEeCcCcc
Q 028577 161 YTSRIDLPEKLYRTDQI-KAEMKNGVLKVTVPKVKEE 196 (207)
Q Consensus 161 f~r~i~LP~~v~d~~~i-kA~~~nGvL~I~lPK~~~~ 196 (207)
|.|+|.||.++ +.++| +|+|+||+|+|++||.++.
T Consensus 83 f~R~~~LP~~v-d~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 83 VRKVIRLPYNV-AKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp EEEEEECSSEE-CTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred EEEEEECCCCc-CcchhCeeEEcCCEEEEEEEcCCCC
Confidence 99999999999 99999 9999999999999998543
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.90 E-value=2.8e-23 Score=155.68 Aligned_cols=95 Identities=17% Similarity=0.348 Sum_probs=81.8
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccccc-ceeeeEEEEEEECCCCCCCCCceEEEE-eCCEE
Q 028577 109 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 186 (207)
Q Consensus 109 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~ikA~~-~nGvL 186 (207)
..+|+|++++|.|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.++ |.++|+|+| +||+|
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNV-DQSALSCSLSADGML 82 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTB-CTTSCEEEECTTSEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEE
Confidence 4789999999999999999999999999999999999997654333 33457899999999999 999999999 89999
Q ss_pred EEEEeCcCccc----CCceeEe
Q 028577 187 KVTVPKVKEEE----RADVFQV 204 (207)
Q Consensus 187 ~I~lPK~~~~~----~~~~i~I 204 (207)
+|++||.++.. +++.|+|
T Consensus 83 ~I~~PK~~~~~~~~~~~r~I~I 104 (106)
T 3l1e_A 83 TFSGPKIPSGVDAGHSERAIPV 104 (106)
T ss_dssp EEEEEBCCCCTTTTSSSCCCCC
T ss_pred EEEEEccCcccccCCCCeEeee
Confidence 99999987752 3445544
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.89 E-value=6e-23 Score=152.60 Aligned_cols=96 Identities=10% Similarity=0.187 Sum_probs=80.7
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccccc-ceeeeEEEEEEECCCCCCCCCceEEEE-eCCEE
Q 028577 109 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 186 (207)
Q Consensus 109 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~ikA~~-~nGvL 186 (207)
.+||+|++++|.|.++|||++++||+|+++++.|+|+|+++...++ ....+.|+|+|.||.++ |.+.|+|.| +||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGV-DPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTB-CTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHCEEEECCCCEE
Confidence 4789999999999999999999999999999999999998754433 23456799999999999 999999999 89999
Q ss_pred EEEEeCcCcccCCceeEeec
Q 028577 187 KVTVPKVKEEERADVFQVKV 206 (207)
Q Consensus 187 ~I~lPK~~~~~~~~~i~I~I 206 (207)
+|++||..+. +++.+.|..
T Consensus 82 ~I~lPK~~~~-~~~~~~i~~ 100 (101)
T 2wj5_A 82 SIQATPASAQ-ASLPSPPAA 100 (101)
T ss_dssp EEEECBCCCC-CSSCC----
T ss_pred EEEEECCCcC-CCCCCcccc
Confidence 9999998554 556776653
No 8
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.89 E-value=2.9e-23 Score=168.66 Aligned_cols=97 Identities=13% Similarity=0.303 Sum_probs=73.0
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeeccccccc-eeeeEEEEEEECCCCCCCCCceEEEE-eCCEE
Q 028577 109 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGE-ESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVL 186 (207)
Q Consensus 109 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e-~~~~~f~r~i~LP~~v~d~~~ikA~~-~nGvL 186 (207)
.+||+|++++|+|.++|||+++|||+|+++++.|+|+|+++.+.++. ...+.|+|+|.||.+| |.++|+|+| +||||
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~V-d~~~i~A~~s~dGvL 143 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSLSSDGVL 143 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTC-CTTTCEEEECTTSCE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCc-ChhHeEEEEcCCCEE
Confidence 36999999999999999999999999999999999999987544333 3456899999999999 999999999 79999
Q ss_pred EEEEeCcCcccCCceeEeec
Q 028577 187 KVTVPKVKEEERADVFQVKV 206 (207)
Q Consensus 187 ~I~lPK~~~~~~~~~i~I~I 206 (207)
+|++||.++....+.|+|+.
T Consensus 144 ~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 144 TVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp EEEEECC-------------
T ss_pred EEEEECCCCCCCCeEEEEec
Confidence 99999986544345666653
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.88 E-value=2.6e-22 Score=144.75 Aligned_cols=82 Identities=21% Similarity=0.378 Sum_probs=70.6
Q ss_pred EEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccccc-ceeeeEEEEEEECCCCCCCCCceEEEEe-CCEEEEE
Q 028577 112 AKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEMK-NGVLKVT 189 (207)
Q Consensus 112 i~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~ikA~~~-nGvL~I~ 189 (207)
+.|++++|.|.++|||++++||+|+++++.|+|+|+++...++ +...+.|.|+|.||.+| |.++|+|.|+ ||+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~v-d~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGV-DPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTC-CGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChHHcEEEECCCCEEEEE
Confidence 4689999999999999999999999999999999998764332 33468999999999999 9999999998 9999999
Q ss_pred EeCcC
Q 028577 190 VPKVK 194 (207)
Q Consensus 190 lPK~~ 194 (207)
+||.+
T Consensus 81 lPK~k 85 (85)
T 3q9p_A 81 APMPK 85 (85)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99963
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=3.1e-21 Score=169.44 Aligned_cols=97 Identities=18% Similarity=0.287 Sum_probs=87.2
Q ss_pred CccceeeEEEcCC----eEEEEEEcCCCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEE
Q 028577 105 GLRRGWDAKETDD----ALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAE 180 (207)
Q Consensus 105 ~~~p~~di~e~~d----~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~ 180 (207)
.+.|++||+|+++ +|+|.++|||++++||+|++++|.|+|+|+++.+.+++..++.|+|+|.||.+| |.++|+|+
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~V-d~e~i~A~ 174 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSV-DRNHIQAT 174 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTB-CGGGCEEE
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCc-cccccEEE
Confidence 4679999999999 999999999999999999999999999999887666667789999999999999 99999999
Q ss_pred Ee-CCEEEEEEeCcCcccCCceeEe
Q 028577 181 MK-NGVLKVTVPKVKEEERADVFQV 204 (207)
Q Consensus 181 ~~-nGvL~I~lPK~~~~~~~~~i~I 204 (207)
|+ ||||+|++||.+++. +.|+|
T Consensus 175 ~~~nGVL~I~lPK~~~~~--~~I~i 197 (314)
T 2bol_A 175 ITTDDVLVIEAPVNEPNY--KAIKL 197 (314)
T ss_dssp ECSSSEEEEEEEBSSCCT--TTEEE
T ss_pred EeCCCEEEEEEeccCccc--ceeec
Confidence 99 999999999986653 34544
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.85 E-value=4.1e-21 Score=139.68 Aligned_cols=83 Identities=17% Similarity=0.368 Sum_probs=68.8
Q ss_pred EEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeecccccc-ceeeeEEEEEEECCCCCCCCCceEEEE-eCCEEEEEE
Q 028577 113 KETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEG-EESVRRYTSRIDLPEKLYRTDQIKAEM-KNGVLKVTV 190 (207)
Q Consensus 113 ~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~f~r~i~LP~~v~d~~~ikA~~-~nGvL~I~l 190 (207)
.+++++|+|.++|||++++||+|+++++.|+|+|+++...++ ....+.|+|+|.||.+| |.+.|+|.| +||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~v-d~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTB-CGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEEEEEE
Confidence 467899999999999999999999999999999998754333 23456899999999999 999999999 899999999
Q ss_pred eCcCcc
Q 028577 191 PKVKEE 196 (207)
Q Consensus 191 PK~~~~ 196 (207)
||..+.
T Consensus 81 pK~~~~ 86 (90)
T 2y1y_A 81 PRKQVS 86 (90)
T ss_dssp CBC---
T ss_pred EcCCCC
Confidence 998654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.76 E-value=1.4e-18 Score=152.66 Aligned_cols=86 Identities=23% Similarity=0.448 Sum_probs=71.7
Q ss_pred ceeeEEEcC---CeEEEEEEc-CCCCccceEEEEECCEEEEEeeecccccc----ceeeeEEEEEEECCCCCCCCCceEE
Q 028577 108 RGWDAKETD---DALNLSIDM-PGLGKEDVRVSLEQNTLVIRGEGGKEGEG----EESVRRYTSRIDLPEKLYRTDQIKA 179 (207)
Q Consensus 108 p~~di~e~~---d~y~l~vdL-PG~~kedI~V~v~~~~L~I~g~~~~~~~~----e~~~~~f~r~i~LP~~v~d~~~ikA 179 (207)
...+|.+++ ++|.|.++| ||++||||+|++++|.|+|+|+++.+.+. |+.++.|+|+|.||++| |.++|+|
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~i~A 299 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVV-DASKTQA 299 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEE-CGGGCEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCc-ChHHeEE
Confidence 446777755 589999999 99999999999999999999998876543 67789999999999999 9999999
Q ss_pred EEeCCEEEEEEeCcC
Q 028577 180 EMKNGVLKVTVPKVK 194 (207)
Q Consensus 180 ~~~nGvL~I~lPK~~ 194 (207)
+|+||||+|++||.+
T Consensus 300 ~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 300 EIVDGLMVVEAPLFK 314 (314)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEeCCEEEEEEecCC
Confidence 999999999999963
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.03 E-value=1.1e-09 Score=78.59 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=72.7
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEE
Q 028577 107 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVL 186 (207)
Q Consensus 107 ~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL 186 (207)
.+.+++.++++.+.|.+.+||+.+++++|.+.++.|.|++.... ...|...+.|+..| +++..++.+.+|.|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~-------~~~y~~~~~L~~~I-~~~~s~~~~~~~~l 73 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG-------EDAYYLQPRLFGKI-IPDKCKYEVLSTKI 73 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT-------SCCEEECCBBSSCB-CGGGCEEEECSSCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC-------CcEEEEeeEcCCcc-CchhEEEEEECCEE
Confidence 46789999999999999999999999999999999999986421 13688899999999 99999999999999
Q ss_pred EEEEeCcCc
Q 028577 187 KVTVPKVKE 195 (207)
Q Consensus 187 ~I~lPK~~~ 195 (207)
.|+|+|.++
T Consensus 74 ~i~L~K~~~ 82 (92)
T 2xcm_C 74 EICLAKADI 82 (92)
T ss_dssp EEEEEBSSS
T ss_pred EEEEEcCCC
Confidence 999999754
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.03 E-value=1.3e-09 Score=81.45 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=73.5
Q ss_pred ccceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCE
Q 028577 106 LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 185 (207)
Q Consensus 106 ~~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGv 185 (207)
..+.+++.++++.+.|.+.+||+.+++++|.+.++.|.|++.... ...|...+.|+..| +++..++.+.+|.
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~-------~~~y~~~~~L~~~I-~~e~s~~~~~~~~ 79 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS-------GEDYNLKLELLHPI-IPEQSTFKVLSTK 79 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT-------SSEEEEEECBSSCC-CGGGEEEEECSSS
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC-------CcEEEEEeeCCCcC-CccccEEEEECCE
Confidence 357799999999999999999999999999999999999986421 23788999999999 9999999999999
Q ss_pred EEEEEeCcCc
Q 028577 186 LKVTVPKVKE 195 (207)
Q Consensus 186 L~I~lPK~~~ 195 (207)
|.|+|+|..+
T Consensus 80 l~i~L~K~~~ 89 (114)
T 1rl1_A 80 IEIKLKKPEA 89 (114)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEEcCCC
Confidence 9999999764
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.38 E-value=3.5e-06 Score=63.22 Aligned_cols=79 Identities=15% Similarity=0.361 Sum_probs=71.4
Q ss_pred ccceeeEEEcCCeEEEEEEcCCCC--ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEE--
Q 028577 106 LRRGWDAKETDDALNLSIDMPGLG--KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEM-- 181 (207)
Q Consensus 106 ~~p~~di~e~~d~y~l~vdLPG~~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~-- 181 (207)
..|.+.|.++++.+.|.+.+|.+. ..++.+.++++.+....+ .|.-++.||..+.+.+.-+|+|
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~------------PYyLRL~lP~~vved~~~~A~YD~ 83 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYDS 83 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET------------TEEEEEECSSCEECSTTCEEEEET
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC------------CeEEEEecCcceecCCCcceEEeC
Confidence 578899999999999999999876 789999999999999986 6888899999998878889999
Q ss_pred eCCEEEEEEeCcCcc
Q 028577 182 KNGVLKVTVPKVKEE 196 (207)
Q Consensus 182 ~nGvL~I~lPK~~~~ 196 (207)
++|.++|++||..+-
T Consensus 84 d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 84 KDECINVKVAKLNKN 98 (115)
T ss_dssp TTTEEEEEEEESSTT
T ss_pred CCcEEEEEEcCCcCC
Confidence 599999999997543
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.30 E-value=8.7e-07 Score=68.46 Aligned_cols=78 Identities=15% Similarity=0.362 Sum_probs=70.8
Q ss_pred ccceeeEEEcCCeEEEEEEcCCCC--ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEE--
Q 028577 106 LRRGWDAKETDDALNLSIDMPGLG--KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEM-- 181 (207)
Q Consensus 106 ~~p~~di~e~~d~y~l~vdLPG~~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~-- 181 (207)
..|.+.+.++++.++|.+.+|... ..++++.+++..+..+.. .|.-++.||..|.+.+..+|+|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~------------PYyLRL~LP~~V~e~~~~kA~YD~ 69 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYDS 69 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS------------SSCEEECCSSCEECCSSCEEEEET
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC------------CeEEEecCCCeeecCCCcceeEec
Confidence 368899999999999999999999 899999999999999886 6778899999997888899999
Q ss_pred eCCEEEEEEeCcCc
Q 028577 182 KNGVLKVTVPKVKE 195 (207)
Q Consensus 182 ~nGvL~I~lPK~~~ 195 (207)
+.|.|+|++||..+
T Consensus 70 d~~~~~VtLpK~~~ 83 (134)
T 2k8q_A 70 KDECINVKVAKLNK 83 (134)
T ss_dssp TTTEEEEEEEESST
T ss_pred cCCEEEEEEeCCCC
Confidence 59999999999754
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.26 E-value=3.4e-06 Score=75.36 Aligned_cols=73 Identities=15% Similarity=0.212 Sum_probs=63.8
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEE
Q 028577 107 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVL 186 (207)
Q Consensus 107 ~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL 186 (207)
.+++.|.+. .|.+++.|||++|++|++.-.++.|+|++ +.|.|.|.||..+....-..|+|+||.|
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~------------g~~rR~i~LP~~L~~~~v~~A~~~~~~L 362 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEA------------GDQRRNIFLPPALSGRPITGAKFQNNYL 362 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEE------------TTEEEEEECCTTTTTCCEEEEEEETTEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEE------------CCEeecccCCHHHcCCCccccEEECCEE
Confidence 345555444 89999999999999999999999999998 4899999999998777788999999999
Q ss_pred EEEEeCc
Q 028577 187 KVTVPKV 193 (207)
Q Consensus 187 ~I~lPK~ 193 (207)
+|++-..
T Consensus 363 ~i~~~~~ 369 (374)
T 3igf_A 363 IISFLEH 369 (374)
T ss_dssp EEEECCC
T ss_pred EEEEehh
Confidence 9998654
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.95 E-value=0.00014 Score=55.20 Aligned_cols=81 Identities=14% Similarity=0.253 Sum_probs=69.7
Q ss_pred cceeeEEEcCCeEEEEEEcCCC---CccceEEEEECCEEEEEeeeccccccceeeeEEEEEEE-CCCCCCCCCceEEEEe
Q 028577 107 RRGWDAKETDDALNLSIDMPGL---GKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRID-LPEKLYRTDQIKAEMK 182 (207)
Q Consensus 107 ~p~~di~e~~d~y~l~vdLPG~---~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~-LP~~v~d~~~ikA~~~ 182 (207)
.+.+++.++.+.+.|.+.+||+ .++++.|.+..+.|.|.+.... ...|.-.+. |-..| ++++-+..+.
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~-------~~~y~~~~~~L~~~I-~~e~S~~~v~ 91 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN-------GKSYSMIVNNLLKPI-SVEGSSKKVK 91 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS-------SSCEEEEEECBSSCC-CTTTCEEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC-------CCcEEEEhHHhcCcc-CcccCEEEEe
Confidence 3468999999999999999999 8999999999999999985321 125777885 99999 9999999999
Q ss_pred CCEEEEEEeCcCc
Q 028577 183 NGVLKVTVPKVKE 195 (207)
Q Consensus 183 nGvL~I~lPK~~~ 195 (207)
.+.+.|+|-|..+
T Consensus 92 ~~kVei~L~K~~~ 104 (127)
T 1x5m_A 92 TDTVLILCRKKVE 104 (127)
T ss_dssp TTEEEEEEECSSS
T ss_pred CCEEEEEEEECCC
Confidence 9999999999864
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.88 E-value=0.00021 Score=53.97 Aligned_cols=84 Identities=19% Similarity=0.275 Sum_probs=69.2
Q ss_pred CCccceeeEEEcCCeEEEEEEcC-CC-CccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEE
Q 028577 104 GGLRRGWDAKETDDALNLSIDMP-GL-GKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEM 181 (207)
Q Consensus 104 ~~~~p~~di~e~~d~y~l~vdLP-G~-~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~ 181 (207)
|+..|.+.+.++.+.+.|.+.|| |+ ++++|+|.+..+.|.|.++... ...+.-...|...| +++.-+..+
T Consensus 16 G~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~-------~~~~~~~~~L~~~I-~~e~S~w~i 87 (124)
T 1wgv_A 16 GAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN-------GERVLMEGKLTHKI-NTESSLWSL 87 (124)
T ss_dssp SBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS-------SEEEEEEEEBSSCB-CTTTCEEEE
T ss_pred CCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC-------CCceEEcccccCcC-CCcCCEEEE
Confidence 34578899999999999999999 87 8999999999999999875311 11234556899999 999999999
Q ss_pred eCCE-EEEEEeCcCc
Q 028577 182 KNGV-LKVTVPKVKE 195 (207)
Q Consensus 182 ~nGv-L~I~lPK~~~ 195 (207)
++|- |.|+|-|...
T Consensus 88 ~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 88 EPGKCVLVNLSKVGE 102 (124)
T ss_dssp CTTSEEEEEECBSSS
T ss_pred eCCCEEEEEEEECCC
Confidence 8885 9999999754
No 20
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.82 E-value=0.00023 Score=53.64 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=67.7
Q ss_pred CCccceeeEEEcCCeEEEEEEcC-C--CCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEE
Q 028577 104 GGLRRGWDAKETDDALNLSIDMP-G--LGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAE 180 (207)
Q Consensus 104 ~~~~p~~di~e~~d~y~l~vdLP-G--~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~ 180 (207)
|+..+.+.+.++.+.+.|++.|| | ++.+||+|.+..+.|.|..+.. .+.-...|...| +++.-...
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~----------~~~~~g~L~~~I-~~deS~w~ 81 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ----------PAIIDGELYNEV-KVEESSWL 81 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS----------CCSEEEEBSSCB-CGGGCEEE
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc----------ceEEeccccccc-cccccEEE
Confidence 45778899999999999999999 4 7899999999999999876521 122345788999 89999999
Q ss_pred EeCC-EEEEEEeCcCc
Q 028577 181 MKNG-VLKVTVPKVKE 195 (207)
Q Consensus 181 ~~nG-vL~I~lPK~~~ 195 (207)
+++| .|.|+|-|...
T Consensus 82 i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 82 IADGAVVTVHLEKINK 97 (121)
T ss_dssp EETTTEEEEEEEBSSS
T ss_pred EcCCCEEEEEEEECCC
Confidence 9998 99999999754
No 21
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.76 E-value=0.00011 Score=56.09 Aligned_cols=81 Identities=19% Similarity=0.295 Sum_probs=67.5
Q ss_pred CCccceeeEEEcCCeEEEEEEcC-C--CCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEE
Q 028577 104 GGLRRGWDAKETDDALNLSIDMP-G--LGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAE 180 (207)
Q Consensus 104 ~~~~p~~di~e~~d~y~l~vdLP-G--~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~ 180 (207)
|+..|.+.+.++.+.+.|.+.|| | +++++|+|.+..+.|.|..+... +.-...|...| +++.-+..
T Consensus 4 g~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~----------~~~~~~L~~~I-~~e~s~w~ 72 (131)
T 1wfi_A 4 GSSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQP----------PVVDGELYNEV-KVEESSWL 72 (131)
T ss_dssp SSSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSC----------CSBCSCBSSCB-CSTTCEEE
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCce----------EEEeccccccc-ccccCEEE
Confidence 45678899999999999999999 6 89999999999999999875210 11234578889 89999999
Q ss_pred EeCC-EEEEEEeCcCc
Q 028577 181 MKNG-VLKVTVPKVKE 195 (207)
Q Consensus 181 ~~nG-vL~I~lPK~~~ 195 (207)
+++| .|.|+|-|..+
T Consensus 73 i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 73 IEDGKVVTVHLEKINK 88 (131)
T ss_dssp EETTTEEEEEEEBSSS
T ss_pred EcCCCEEEEEEEECCC
Confidence 9998 89999999864
No 22
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.71 E-value=0.00023 Score=54.77 Aligned_cols=88 Identities=9% Similarity=0.106 Sum_probs=70.8
Q ss_pred cceeeEEEc-CCeEEEEEEcCCCCccceEEEEECCEEEEEeeeccccc--ccee---eeEEEEEEECCCCCCCCCceEEE
Q 028577 107 RRGWDAKET-DDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGE--GEES---VRRYTSRIDLPEKLYRTDQIKAE 180 (207)
Q Consensus 107 ~p~~di~e~-~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~--~e~~---~~~f~r~i~LP~~v~d~~~ikA~ 180 (207)
.+.++++++ .+.+.|.|.++++.+++++|.+..+.|.|.+....... ..-. ...|.-.+.|-..| ++++-+..
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I-~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLI-EPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCE-EEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccC-CchhCEEE
Confidence 567899999 99999999999999999999999999999975432100 0000 12677788899999 89998999
Q ss_pred EeCCEEEEEEeCcCc
Q 028577 181 MKNGVLKVTVPKVKE 195 (207)
Q Consensus 181 ~~nGvL~I~lPK~~~ 195 (207)
+..+-+.|+|.|...
T Consensus 98 v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 98 FTASRIDICLRKRQS 112 (134)
T ss_dssp ECSSEEEEEEEESSS
T ss_pred EeCCEEEEEEEECCC
Confidence 999999999999753
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.65 E-value=0.00035 Score=52.80 Aligned_cols=78 Identities=17% Similarity=0.186 Sum_probs=67.1
Q ss_pred eeeEEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEE
Q 028577 109 GWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKV 188 (207)
Q Consensus 109 ~~di~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I 188 (207)
.++++++.+.+.|++.+|+. ++++|.+..+.|.+++..... ...|.-.+.|-..| +++.-+..+.++-+.|
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~------~~~y~~~l~L~~~I-~~e~S~~~v~~~kiei 75 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD------NFKHLNEIDLFHCI-DPNDSKHKRTDRSILC 75 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT------TEEEEEEEEBSSCE-EEEEEEEEECSSCEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC------CceEEEEEEcccee-ccccCEEEECCCEEEE
Confidence 79999999999999999995 799999999999999864211 13588889999999 9999999998899999
Q ss_pred EEeCcCc
Q 028577 189 TVPKVKE 195 (207)
Q Consensus 189 ~lPK~~~ 195 (207)
+|.|..+
T Consensus 76 ~L~K~~~ 82 (125)
T 1ejf_A 76 CLRKGES 82 (125)
T ss_dssp EEEESST
T ss_pred EEEECCC
Confidence 9999754
No 24
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.56 E-value=0.00058 Score=51.98 Aligned_cols=76 Identities=9% Similarity=0.222 Sum_probs=62.9
Q ss_pred cceeeEEEcCCeEEEEEEcC-CCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCE
Q 028577 107 RRGWDAKETDDALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 185 (207)
Q Consensus 107 ~p~~di~e~~d~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGv 185 (207)
.|.+.+.++.+.+.|.|.|| |+++++|+|.+..+.|.|.++.. . .-...|...| +++.-+..+.+|-
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g~----------~-~~~~~L~~~I-~~e~S~w~i~~~k 71 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQGE----------I-VIDGELLHEV-DVSSLWWVINGDV 71 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETTE----------E-EEEEEBSSCE-EEEEEEEEEETTE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECCE----------e-eEcccccccc-ccccCEEEEeCCE
Confidence 57789999999999999996 89999999999999999987411 1 3345789999 9999999999999
Q ss_pred EEEEEeCcC
Q 028577 186 LKVTVPKVK 194 (207)
Q Consensus 186 L~I~lPK~~ 194 (207)
|.|+|-|..
T Consensus 72 v~i~L~K~~ 80 (131)
T 2o30_A 72 VDVNVTKKR 80 (131)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 999999973
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.52 E-value=0.00096 Score=52.52 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=66.5
Q ss_pred ccceeeEEEcCCeEEEEEEcC-CCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCC
Q 028577 106 LRRGWDAKETDDALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNG 184 (207)
Q Consensus 106 ~~p~~di~e~~d~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nG 184 (207)
..+.+.+.++.+.+.|+|.|| |++.++|+|.+..+.|.|.++. . .+ -...|...| +++.-+..+++|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg-------~---~~-l~g~L~~~I-~~eeS~w~i~~~ 79 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG-------R---EI-LKGKLFDST-IADEGTWTLEDR 79 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT-------E---EE-EEEEBSSCB-CGGGCEEEEECC
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC-------E---EE-Eeecccccc-CccccEEEEcCC
Confidence 467899999999999999998 8999999999999999998741 1 12 346789999 999999999988
Q ss_pred E-EEEEEeCcCc
Q 028577 185 V-LKVTVPKVKE 195 (207)
Q Consensus 185 v-L~I~lPK~~~ 195 (207)
- |.|+|-|...
T Consensus 80 k~v~I~L~K~~~ 91 (157)
T 2rh0_A 80 KMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEEEEBSSC
T ss_pred cEEEEEEEEcCC
Confidence 5 9999999864
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.23 E-value=0.0008 Score=52.66 Aligned_cols=78 Identities=17% Similarity=0.254 Sum_probs=66.2
Q ss_pred cceeeEEEcCCeEEEEEEcCCCCccceEEEEE-CCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCE
Q 028577 107 RRGWDAKETDDALNLSIDMPGLGKEDVRVSLE-QNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV 185 (207)
Q Consensus 107 ~p~~di~e~~d~y~l~vdLPG~~kedI~V~v~-~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGv 185 (207)
.|.++++++.+.+.|+|.+|++ ++++|.++ .+.|.+++... ....|.-.+.|=..| +++ -+......-
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~-------~~~~y~~~l~L~~~I-dpe-S~~~v~~~k 72 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGA-------QGERFEFSLELYGKI-MTE-YRKNVGLRN 72 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETT-------TTEEEEEEEEBSSCE-EEE-EEEEEESSS
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcC-------CCceEEEEeEhhhcc-ccc-ceEEecCCE
Confidence 5789999999999999999997 58999999 78999998611 113688889999999 899 888888888
Q ss_pred EEEEEeCcCc
Q 028577 186 LKVTVPKVKE 195 (207)
Q Consensus 186 L~I~lPK~~~ 195 (207)
+.|+|.|..+
T Consensus 73 Iei~L~K~e~ 82 (150)
T 2kmw_A 73 IIFSIQKEER 82 (150)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.07 E-value=0.0003 Score=54.00 Aligned_cols=84 Identities=11% Similarity=0.224 Sum_probs=61.4
Q ss_pred cceeeEEEcCCe-------EEEEEEcCCCCccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEE
Q 028577 107 RRGWDAKETDDA-------LNLSIDMPGLGKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKA 179 (207)
Q Consensus 107 ~p~~di~e~~d~-------y~l~vdLPG~~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA 179 (207)
.|.+.+.++.+. +.|+|.+|++ .+++|.+..+.|.+++....... ......|.-.+.|...| +++..+.
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g-~~~~~~y~~~l~L~~~I-dpe~S~~ 81 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVG-DENVHHYQLHIDLYKEI-IPEKTMH 81 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC--------CEEBCEEEECSSCC-CSSSEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccC-CccCceEEEEEEChhhc-cccccEE
Confidence 566778888766 9999999997 48999999999999876421000 00123688889999999 9999999
Q ss_pred EEeCCE-EEEEEeCcC
Q 028577 180 EMKNGV-LKVTVPKVK 194 (207)
Q Consensus 180 ~~~nGv-L~I~lPK~~ 194 (207)
.+.++. |.|+|.|..
T Consensus 82 ~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKD 97 (134)
T ss_dssp EECCC--CEEEEEECS
T ss_pred EECCCEEEEEEEEECC
Confidence 999998 999999986
No 28
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=78.99 E-value=7.2 Score=27.42 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=27.8
Q ss_pred eEEEEEEcC-CCCccceEEEEECCEEEEEeeeccc
Q 028577 118 ALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGKE 151 (207)
Q Consensus 118 ~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~~ 151 (207)
.|.-.+.|| +++.+.|+-++++|.|+|+..+...
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 345578899 5899999999999999999876543
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=67.34 E-value=10 Score=25.73 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=27.5
Q ss_pred eEEEEEEcC-CCCccceEEEEE-CCEEEEEeee
Q 028577 118 ALNLSIDMP-GLGKEDVRVSLE-QNTLVIRGEG 148 (207)
Q Consensus 118 ~y~l~vdLP-G~~kedI~V~v~-~~~L~I~g~~ 148 (207)
.|.=.+.|| +++.+.|+-++. +|.|+|+.-+
T Consensus 51 ~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lPK 83 (85)
T 3q9p_A 51 CFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPM 83 (85)
T ss_dssp EEEEEEECCTTCCGGGCEEEECTTSEEEEEEEC
T ss_pred EEEEEEECCCCcChHHcEEEECCCCEEEEEEEc
Confidence 677889999 799999999998 9999999754
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=67.20 E-value=9.4 Score=26.47 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=28.5
Q ss_pred CeEEEEEEcCC-CCccceEEEEECCEEEEEeeec
Q 028577 117 DALNLSIDMPG-LGKEDVRVSLEQNTLVIRGEGG 149 (207)
Q Consensus 117 d~y~l~vdLPG-~~kedI~V~v~~~~L~I~g~~~ 149 (207)
+.|.-.+.||. ++.+.|+-++++|.|+|+..+.
T Consensus 64 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 64 GSFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp EEEEEEEECCTTBCTTSCEEEEETTEEEEEEEBC
T ss_pred eEEEEEEECCCCcChHHeEEEEeCCEEEEEEecC
Confidence 46788899995 8999999999999999998653
No 31
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=64.69 E-value=13 Score=28.38 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=29.0
Q ss_pred CeEEEEEEcC-CCCccceEEEEECCEEEEEeeecc
Q 028577 117 DALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGK 150 (207)
Q Consensus 117 d~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~ 150 (207)
..|.-.+.|| +++.+.|+-++++|.|+|+..+..
T Consensus 117 g~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lpK~~ 151 (161)
T 4eld_A 117 EEIYRTIKLPATVKEENASAKFENGVLSVILPKAE 151 (161)
T ss_dssp CEEEEEEECSSCBCGGGCEEEEETTEEEEEEEBCG
T ss_pred ccEEEEEECCCCcccccEEEEEECCEEEEEEEcCC
Confidence 4677788999 689999999999999999987643
No 32
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=62.70 E-value=19 Score=25.69 Aligned_cols=45 Identities=20% Similarity=0.350 Sum_probs=30.0
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECC-CCCCCCCceEEEEeCCE---EEEEEeC
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLP-EKLYRTDQIKAEMKNGV---LKVTVPK 192 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP-~~v~d~~~ikA~~~nGv---L~I~lPK 192 (207)
|+.|+|+++++.++|+|.+. .-++ .|| .. |+...++|. |.|..+.
T Consensus 20 P~gV~V~i~~~~VtVKGPkG----------~L~~--~~~h~~------v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPRG----------TLRR--DFNHIN------VELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEETTEEEEEETTE----------EEEE--ECCSSC------CEEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEeCCEEEEECCCc----------eEEE--EeccCc------EEEEEcCCceeEEEEEccC
Confidence 47889999999999999642 3333 344 33 445667766 7776554
No 33
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=60.66 E-value=12 Score=26.22 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=28.0
Q ss_pred EEEEEEcC-CCCccceEEEE-ECCEEEEEeeecc
Q 028577 119 LNLSIDMP-GLGKEDVRVSL-EQNTLVIRGEGGK 150 (207)
Q Consensus 119 y~l~vdLP-G~~kedI~V~v-~~~~L~I~g~~~~ 150 (207)
|.-.+.|| +++.+.|+-++ ++|.|+|+..+..
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~~ 89 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEGVLSIQATPAS 89 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTSEEEEEECBCC
T ss_pred EEEEEECCCCcChhHCEEEECCCCEEEEEEECCC
Confidence 77889999 78999999999 7999999986543
No 34
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=60.65 E-value=12 Score=25.71 Aligned_cols=31 Identities=13% Similarity=0.309 Sum_probs=27.0
Q ss_pred EEEEEEcC-CCCccceEEEE-ECCEEEEEeeec
Q 028577 119 LNLSIDMP-GLGKEDVRVSL-EQNTLVIRGEGG 149 (207)
Q Consensus 119 y~l~vdLP-G~~kedI~V~v-~~~~L~I~g~~~ 149 (207)
|.-.+.|| +++.+.|+-.+ ++|.|+|+..+.
T Consensus 51 f~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK~ 83 (90)
T 2y1y_A 51 FHRKYRIPADVDPLTITSSMSSDGVLTVNGPRK 83 (90)
T ss_dssp EEEEEECCTTBCGGGCEEEECTTSEEEEEECBC
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEEcC
Confidence 77788999 68999999999 899999998654
No 35
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=59.51 E-value=15 Score=26.08 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=28.8
Q ss_pred EEEEEEcC-CCCccceEEEE-ECCEEEEEeeeccc
Q 028577 119 LNLSIDMP-GLGKEDVRVSL-EQNTLVIRGEGGKE 151 (207)
Q Consensus 119 y~l~vdLP-G~~kedI~V~v-~~~~L~I~g~~~~~ 151 (207)
|.=.+.|| +++.+.|+-++ ++|.|+|+..+...
T Consensus 57 F~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~ 91 (106)
T 3l1e_A 57 FHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPS 91 (106)
T ss_dssp EEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCC
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEEccCc
Confidence 77779999 78999999999 89999999976543
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=57.98 E-value=21 Score=26.93 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=27.5
Q ss_pred eEEEEEEcC-CCCccceEEEEECCEEEEEeeecc
Q 028577 118 ALNLSIDMP-GLGKEDVRVSLEQNTLVIRGEGGK 150 (207)
Q Consensus 118 ~y~l~vdLP-G~~kedI~V~v~~~~L~I~g~~~~ 150 (207)
.|.-.+.|| +++.+.|+-++++|.|+|+..+..
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETTEEEEEEECCC
T ss_pred EEEEEEECCCCccccceEEEEECCEEEEEEEccC
Confidence 356678898 689999999999999999986543
No 37
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=55.79 E-value=13 Score=25.01 Aligned_cols=15 Identities=40% Similarity=0.472 Sum_probs=12.5
Q ss_pred CceEEEEeCCEEEEE
Q 028577 175 DQIKAEMKNGVLKVT 189 (207)
Q Consensus 175 ~~ikA~~~nGvL~I~ 189 (207)
..|+|.|+||||+--
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 469999999999754
No 38
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=54.68 E-value=33 Score=26.95 Aligned_cols=45 Identities=22% Similarity=0.402 Sum_probs=32.3
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEEEEeC
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPK 192 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I~lPK 192 (207)
|+.|+|+++++.++|+|.. +..++. |+..+ +...+||.|.|+.+.
T Consensus 11 P~gV~V~i~~~~VtVkGpk----------G~L~~~--~~~~v------~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK----------GELTRT--FHPDM------TITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEEE--CCTTC------EEEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC----------eEEEEE--cCCCE------EEEEeCCEEEEEcCC
Confidence 5788999999999999964 344443 35444 445689998887654
No 39
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=50.31 E-value=39 Score=27.42 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=32.0
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEEEEeCc
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKV 193 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I~lPK~ 193 (207)
|+.|+|+++++.++|+|.. +..++. |+..+ +...+||.|.|+.+..
T Consensus 39 P~gV~V~i~~~~VtVKGPk----------G~L~~~--~~~~v------~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPK----------GELTVP--YNTEL------TVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCC----------EEEEEE--CCCCe------EEEEECCEEEEEcCCC
Confidence 4788999999999999964 334443 34444 4556899988876543
No 40
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=49.92 E-value=16 Score=28.84 Aligned_cols=46 Identities=15% Similarity=0.260 Sum_probs=31.9
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEEEEeC
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPK 192 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I~lPK 192 (207)
|+.|+|+++++.++|+|.. +.-++.|. +.. ++...++|.|.|..+.
T Consensus 9 P~gV~v~i~~~~vtVkGpk----------G~L~~~~~-~~~------v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDN----------GSVTRRLW-YPD------IDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEEECC-CTT------CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC----------eEEEEEEE-CCe------EEEEEECCEEEEEcCC
Confidence 4788999999999999964 33334331 333 3456789998887654
No 41
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=49.10 E-value=31 Score=27.21 Aligned_cols=44 Identities=18% Similarity=0.447 Sum_probs=31.2
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEEEEe
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 191 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I~lP 191 (207)
|+.|+|+++++.++|+|... .-++. |+..+ +-.++++.|.|..+
T Consensus 12 P~gV~v~i~~~~v~VkGpkG----------~L~~~--~~~~v------~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKG----------ELEVP--VSPEM------RVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSSC----------EEEEE--CCTTS------EEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCCc----------EEEEE--eCCCE------EEEEECCEEEEEEC
Confidence 58899999999999999642 33333 44444 34567998888743
No 42
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=48.09 E-value=71 Score=25.71 Aligned_cols=36 Identities=22% Similarity=0.159 Sum_probs=22.1
Q ss_pred EEEcCCeEEEEEEcCCCCccceEEEEECCEEEEEee
Q 028577 112 AKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGE 147 (207)
Q Consensus 112 i~e~~d~y~l~vdLPG~~kedI~V~v~~~~L~I~g~ 147 (207)
+...++.+.|+++-+.--.+.|++++++++|.|+-+
T Consensus 36 l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~ 71 (250)
T 3jx8_A 36 YEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPK 71 (250)
T ss_dssp EEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEEC
T ss_pred EEECCCCceEEEEECccccceEEEEEECCEEEEEEc
Confidence 333334556666655444567777777777777765
No 43
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=43.65 E-value=25 Score=27.46 Aligned_cols=31 Identities=16% Similarity=0.322 Sum_probs=26.4
Q ss_pred EEEEEEcC-CCCccceEEEE-ECCEEEEEeeec
Q 028577 119 LNLSIDMP-GLGKEDVRVSL-EQNTLVIRGEGG 149 (207)
Q Consensus 119 y~l~vdLP-G~~kedI~V~v-~~~~L~I~g~~~ 149 (207)
|.=++.|| +++.+.|+-++ ++|.|+|+..+.
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~ 150 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSDGVLTVNGPRK 150 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTTSCEEEEEECC
T ss_pred EEEEEECCCCcChhHeEEEEcCCCEEEEEEECC
Confidence 55667898 78999999999 799999998764
No 44
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=42.77 E-value=37 Score=26.98 Aligned_cols=72 Identities=17% Similarity=0.297 Sum_probs=0.0
Q ss_pred EEEcCCeEEEEEEcCCCCc----cceEEEEECCE-----EEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEe
Q 028577 112 AKETDDALNLSIDMPGLGK----EDVRVSLEQNT-----LVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMK 182 (207)
Q Consensus 112 i~e~~d~y~l~vdLPG~~k----edI~V~v~~~~-----L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~ 182 (207)
|.-.++-..-+.++++|++ ..++|.+..+. ++|+| ++++ .+.++.+.+
T Consensus 5 ikgsg~~vt~~~~v~~F~~I~v~~~~~V~l~qg~~~~~~V~i~g---------------------~~nl--~~~i~~~v~ 61 (221)
T 3pet_A 5 IQPSKKLITRDYKVKEFNKIDAGTVGNIYYTQSTDGKTDLQIYG---------------------PDNI--VALIQVAVK 61 (221)
T ss_dssp BCCCSCEEEEEECCCCCSEEEECCBSEEEEEECSSSCCEEEEEE---------------------EHHH--HTTEEEEEE
T ss_pred EeCCCCEEEEEEecCCCcEEEEcccEEEEEEECCCCcEEEEEEE---------------------Chhh--cceEEEEEE
Q ss_pred CCEEEEEEeCcCcccCCceeEeec
Q 028577 183 NGVLKVTVPKVKEEERADVFQVKV 206 (207)
Q Consensus 183 nGvL~I~lPK~~~~~~~~~i~I~I 206 (207)
+|.|+|...+...-.....+.|.|
T Consensus 62 ~g~L~I~~~~~~~~~~~~~~~i~V 85 (221)
T 3pet_A 62 DNTLFLSIDKSKKVRNFKKMKITI 85 (221)
T ss_dssp TTEEEEEECTTCCBSCCTTCEEEE
T ss_pred CCEEEEEEcCCcccCCCCeEEEEE
No 45
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=41.55 E-value=35 Score=24.01 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=29.6
Q ss_pred CCeEEEEEEcCC-CCccceEEEEECCEEEEEeeec
Q 028577 116 DDALNLSIDMPG-LGKEDVRVSLEQNTLVIRGEGG 149 (207)
Q Consensus 116 ~d~y~l~vdLPG-~~kedI~V~v~~~~L~I~g~~~ 149 (207)
+..|.+.++|++ +.+++-+..+.++.|.|.-.+.
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcC
Confidence 568999999997 6999999999999999988654
No 46
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=40.71 E-value=62 Score=23.14 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=27.0
Q ss_pred EEEEEEECCCCCCCCCceEEEEeC-CEEEEEEeCcCc
Q 028577 160 RYTSRIDLPEKLYRTDQIKAEMKN-GVLKVTVPKVKE 195 (207)
Q Consensus 160 ~f~r~i~LP~~v~d~~~ikA~~~n-GvL~I~lPK~~~ 195 (207)
.|.-.+.||. + +.+.|+-.+.+ |.|+|..-+..+
T Consensus 35 ~~~v~~~lPG-~-~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLAG-F-NKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECCS-C-CGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECCC-C-CHHHEEEEEeCCCEEEEEEEEecc
Confidence 3445567885 6 89999999999 999999887643
No 47
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=39.79 E-value=31 Score=27.49 Aligned_cols=46 Identities=15% Similarity=0.207 Sum_probs=31.6
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEE--eCCEEEEEEeC
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEM--KNGVLKVTVPK 192 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~--~nGvL~I~lPK 192 (207)
|+.|+|+++++.++|+|.+ +.-++. |+. ..++-.+ ++|.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPk----------G~L~~~--~~~-----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPR----------GKLTRN--FKH-----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEEE--CCC-----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCCEEEEECCC----------ceEEEE--ccC-----CcEEEEEEcCCCEEEEEECC
Confidence 5789999999999999964 333343 331 1344556 78988888653
No 48
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=37.89 E-value=29 Score=27.52 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=30.8
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEEEEe
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 191 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I~lP 191 (207)
|+.|+|+++++.++|+|.+ +.-++.|.- .. ++-..++|.|.|..+
T Consensus 14 P~gV~v~i~~~~V~VkGpk----------G~L~~~~~~-~~------v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPK----------GELEREFFW-PG------IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSEEEEECSS----------CEEEEECCC-TT------CEEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcCC----------eEEEEEecC-Cc------EEEEEeCCEEEEEEC
Confidence 4789999999999999975 234443321 22 345578898888753
No 49
>3ljy_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: PGE; 2.41A {Parabacteroides distasonis}
Probab=34.58 E-value=1.3e+02 Score=24.05 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=0.0
Q ss_pred EEEcCCeEEEEEEcCCCCc----cceEEEEEC---CE-EEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeC
Q 028577 112 AKETDDALNLSIDMPGLGK----EDVRVSLEQ---NT-LVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKN 183 (207)
Q Consensus 112 i~e~~d~y~l~vdLPG~~k----edI~V~v~~---~~-L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~n 183 (207)
|.-.++-..-+.++++|++ ..++|.+.. .. +.|+| ++++ .+.++.+.++
T Consensus 6 ikg~g~~vt~~~~v~~F~~I~v~~~~~V~l~qg~~~~~V~i~~---------------------~~nl--~~~i~~~v~~ 62 (243)
T 3ljy_A 6 VKGDGKLTSKKISVADYNEIKVDGVIDFNYEQSDDPSTVEVTV---------------------DQNL--HPYVNIEVKD 62 (243)
T ss_dssp EECCSCEEEEEEECCCCSEEEECSSCEEEEEECSSCCEEEEEE---------------------EGGG--GGGEEEEEET
T ss_pred EECCCCEEEEEEEcCCccEEEEcccEEEEEEECCCCcEEEEEE---------------------Ccch--hceEEEEEEC
Q ss_pred CEEEEEEeC
Q 028577 184 GVLKVTVPK 192 (207)
Q Consensus 184 GvL~I~lPK 192 (207)
|.|+|...+
T Consensus 63 g~L~I~~~~ 71 (243)
T 3ljy_A 63 RVLTIAFKG 71 (243)
T ss_dssp TEEEEEECS
T ss_pred CEEEEEEcC
No 50
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=33.58 E-value=68 Score=25.45 Aligned_cols=46 Identities=24% Similarity=0.380 Sum_probs=31.2
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEE-EeCCEEEEEEeC
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAE-MKNGVLKVTVPK 192 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~-~~nGvL~I~lPK 192 (207)
|+.|+|+++++.++|+|.+ +.-++. |+. + .++-+ .++|.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPk----------G~L~~~--~~~-~----~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPR----------GTLTKN--LKH-I----DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETTEEEEEETT----------EEEEEE--CTT-T----CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCC----------eEEEEE--ccC-C----cEEEEEecCCeEEEEECC
Confidence 5889999999999999964 344443 432 1 23334 468998888653
No 51
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=33.21 E-value=22 Score=23.93 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=19.0
Q ss_pred CCCccceEEEEECCEEEEEeee
Q 028577 127 GLGKEDVRVSLEQNTLVIRGEG 148 (207)
Q Consensus 127 G~~kedI~V~v~~~~L~I~g~~ 148 (207)
-|+.+.|.+....+.|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTEEEEEEEEC
T ss_pred EECCCEEEEEeCceEEEEEcCC
Confidence 4678899999999999999974
No 52
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=32.06 E-value=23 Score=28.97 Aligned_cols=45 Identities=22% Similarity=0.428 Sum_probs=30.9
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEE-EEeCCEEEEEEeC
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKA-EMKNGVLKVTVPK 192 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA-~~~nGvL~I~lPK 192 (207)
|+.|+|+++++.++|+|... ..++ .|+..+ +. ..+||.|.|..+.
T Consensus 54 P~gV~V~i~~~~VtVKGPkG----------~L~~--~~~~~v------~i~~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPLG----------ELAL--TYPREV------ELTKEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESSSEEEECCSSC----------CEEE--ECCSSC------EEEECSSSCEEEECSS
T ss_pred CCCCEEEEeCCEEEEECCCe----------EEEE--EcCCCE------EEEEecCCEEEEEcCC
Confidence 57788999999999999653 3333 345555 23 4578888887654
No 53
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=32.04 E-value=33 Score=21.59 Aligned_cols=23 Identities=26% Similarity=0.514 Sum_probs=19.0
Q ss_pred CCccceEEEEECCEEEEEeeecc
Q 028577 128 LGKEDVRVSLEQNTLVIRGEGGK 150 (207)
Q Consensus 128 ~~kedI~V~v~~~~L~I~g~~~~ 150 (207)
+.-+||+|+.++++++++|..+.
T Consensus 30 lgyndinvtwdgdtvtvegqleg 52 (62)
T 2gjh_A 30 LGYNDINVTWDGDTVTVEGQLEG 52 (62)
T ss_dssp TTCCSCEEEECSSCEEEEEECCC
T ss_pred hCcccceeEEcCCEEEEEeEEcC
Confidence 34579999999999999998653
No 54
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=29.76 E-value=94 Score=24.61 Aligned_cols=47 Identities=17% Similarity=0.256 Sum_probs=32.1
Q ss_pred CccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCE---EEEEEeC
Q 028577 129 GKEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGV---LKVTVPK 192 (207)
Q Consensus 129 ~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGv---L~I~lPK 192 (207)
=|+.|+|+++++.++|+|.. +..++ .||.. .++...++|. |.|..+.
T Consensus 12 IP~gV~V~i~~~~VtVkGpk----------G~L~~--~~~~~-----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 12 IPENVDITLKGRTVIVKGPR----------GTLRR--DFNHI-----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp CCTTCEEEEETTEEEEEETT----------EEEEE--ECCSS-----SCEEEEETTTTCEEEEECSC
T ss_pred cCCCCEEEEeCCEEEEECCC----------eEEEE--EeCCC-----CEEEEEecCceeEEEEEcCC
Confidence 36889999999999999964 23333 34431 3445668888 7777554
No 55
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=27.72 E-value=33 Score=24.64 Aligned_cols=17 Identities=35% Similarity=0.653 Sum_probs=14.9
Q ss_pred ceEEEEeCCEEEEEEeC
Q 028577 176 QIKAEMKNGVLKVTVPK 192 (207)
Q Consensus 176 ~ikA~~~nGvL~I~lPK 192 (207)
.+.+++.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 48899999999999974
No 56
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=27.03 E-value=78 Score=25.45 Aligned_cols=43 Identities=14% Similarity=0.068 Sum_probs=27.3
Q ss_pred ccceeeEEEcCCeEEEEEEcCC---------CCccceEEEEEC---CEEEEEeee
Q 028577 106 LRRGWDAKETDDALNLSIDMPG---------LGKEDVRVSLEQ---NTLVIRGEG 148 (207)
Q Consensus 106 ~~p~~di~e~~d~y~l~vdLPG---------~~kedI~V~v~~---~~L~I~g~~ 148 (207)
..+.+.+...++.+.|...-.. +.+..++|.+.- ..|.+.|..
T Consensus 53 l~~~i~~~v~~g~L~I~~~~~~~~~~~~~~~~~~~~~~v~V~~p~L~~i~~~gsg 107 (250)
T 3jx8_A 53 LFDYLVTEVEGGTLKIYPKSIKKGFNNNSYDLRPTVYKIKSNSKELKELNTVGSG 107 (250)
T ss_dssp GGGGEEEEEETTEEEEEECBCTTTTTSCBCEEECSCEEEEEEESCCSEEEEESSC
T ss_pred ccceEEEEEECCEEEEEEcCCccccccceeecCCcEEEEEEEccceeeEEecccE
Confidence 3456777788888888887541 223466676652 566676643
No 57
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=26.94 E-value=96 Score=22.34 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=29.7
Q ss_pred EEEcCCeEEEEEEc-CCCCccceEEEEECCEEEEEeeecc
Q 028577 112 AKETDDALNLSIDM-PGLGKEDVRVSLEQNTLVIRGEGGK 150 (207)
Q Consensus 112 i~e~~d~y~l~vdL-PG~~kedI~V~v~~~~L~I~g~~~~ 150 (207)
+.++++.+.|.+.+ ||.+++.| ..+.++.|.|+.....
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEecCC
Confidence 56778888898877 89999987 4577888988876443
No 58
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A
Probab=26.68 E-value=65 Score=29.40 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=24.0
Q ss_pred CCCCCCCCCceEEEEeCCEEEEEEeCcCcccCCceeEeecC
Q 028577 167 LPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 207 (207)
Q Consensus 167 LP~~v~d~~~ikA~~~nGvL~I~lPK~~~~~~~~~i~I~Ie 207 (207)
=|+.| .+.. .+..++|.|+++||...- .++.++.|
T Consensus 470 ~P~~V-~p~~-~~~~~~~~~~~~lp~~S~----~vl~l~~~ 504 (504)
T 3ug3_A 470 NPNVV-DITS-ETITVDTEFEHTFKPFSC----SVIEVELE 504 (504)
T ss_dssp CTTSS-EEEE-EEEEECSEEEEEECTTEE----EEEEEEC-
T ss_pred CCCEE-Eeee-eeEecCCEEEEEECCCEE----EEEEEEeC
Confidence 36666 5555 677799999999998632 35666554
No 59
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=23.18 E-value=88 Score=21.54 Aligned_cols=23 Identities=26% Similarity=0.557 Sum_probs=19.0
Q ss_pred CCCccceEEEEECCEEEEEeeec
Q 028577 127 GLGKEDVRVSLEQNTLVIRGEGG 149 (207)
Q Consensus 127 G~~kedI~V~v~~~~L~I~g~~~ 149 (207)
.+.-+||.|++++++++++|..+
T Consensus 73 elgyndinvtfdgdtvtvegqle 95 (106)
T 1qys_A 73 ELGYNDINVTFDGDTVTVEGQLE 95 (106)
T ss_dssp HTTCCEEEEEEETTEEEEEEEC-
T ss_pred HhCCcceeEEEcCCeEEEEeEEc
Confidence 44568999999999999999764
No 60
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=22.41 E-value=39 Score=26.51 Aligned_cols=42 Identities=19% Similarity=0.398 Sum_probs=29.8
Q ss_pred ccceEEEEECCEEEEEeeeccccccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEEE
Q 028577 130 KEDVRVSLEQNTLVIRGEGGKEGEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVT 189 (207)
Q Consensus 130 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I~ 189 (207)
|+.|+|+++++.++|+|... .-++. |+..+ +-.++++.|.|.
T Consensus 11 P~gV~v~i~~~~V~VkGpkG----------~L~~~--~~~~v------~i~~~~~~l~v~ 52 (176)
T 3r8s_G 11 PAGVDVKINGQVITIKGKNG----------ELTRT--LNDAV------EVKHADNTLTFG 52 (176)
T ss_dssp CTTCCCEESSSEEECCBTTB----------CCEEE--CCSSC------EEEEETTEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCCE----------EEEEE--CCCCE------EEEEeCCEEEEE
Confidence 57889999999999999653 22333 34444 445688988887
No 61
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=21.88 E-value=63 Score=23.91 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=14.5
Q ss_pred eEEEEeCCEEEEEEeC
Q 028577 177 IKAEMKNGVLKVTVPK 192 (207)
Q Consensus 177 ikA~~~nGvL~I~lPK 192 (207)
+.+++.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7899999999999974
No 62
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=21.58 E-value=2.6e+02 Score=22.60 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=41.5
Q ss_pred EEEEEE---cCCCCccceEEEEE--CCEEEEEeeeccc-cccceeeeEEEEEEECCCCCCCCCceEEEEeCCEEEEE
Q 028577 119 LNLSID---MPGLGKEDVRVSLE--QNTLVIRGEGGKE-GEGEESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVT 189 (207)
Q Consensus 119 y~l~vd---LPG~~kedI~V~v~--~~~L~I~g~~~~~-~~~e~~~~~f~r~i~LP~~v~d~~~ikA~~~nGvL~I~ 189 (207)
|.+.++ |||+..+==-|.++ +++|.+....... ..-.. .+...+++.|...- |.+.|... .+|.+.|.
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~-~g~v~~~i~l~g~~-D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTT-NGDLIRTIPLDFVK-DLETIEYI-GDNQFVIS 86 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEET-TCCEEEEEECSSCS-SEEEEEEC-STTEEEEE
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeC-CCCEEEEEecCCCC-ChHHeEEe-CCCEEEEE
Confidence 555554 89998753346666 4777765543111 00011 26788999997766 88888653 77766554
No 63
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=21.08 E-value=77 Score=23.25 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=41.4
Q ss_pred cCCCCccceEEEEECCEEEEEeeeccccccc---------eeee-EEEEEEEC-CC----CCC----------CCCceEE
Q 028577 125 MPGLGKEDVRVSLEQNTLVIRGEGGKEGEGE---------ESVR-RYTSRIDL-PE----KLY----------RTDQIKA 179 (207)
Q Consensus 125 LPG~~kedI~V~v~~~~L~I~g~~~~~~~~e---------~~~~-~f~r~i~L-P~----~v~----------d~~~ikA 179 (207)
-|.+++-.|.|.++++.++++|......+.. .... ...-.|.+ |. +.. ....++.
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp~~~~k~aa~~a~~~v~Gv~~~V~d~i~V~~~~~p~~~~a~~~aL~~~~~l~~i~V 81 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFPDEAAKAALMTALNGLLAPGVNVIDQIHVDPVVRSLDFSSAEPVFTASVPIPDFGL 81 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEESCHHHHHHHHHHHHTTCCTTCEEEECCEECTTCCCCCGGGCHHHHHHHTTCTTCEE
T ss_pred CCcccceeEEEEEECCEEEEEEECCCHHHHHHHHHHHHHhcCCCcceEEeEEEcCCCCCccHHHHHHHHHhcCcCCceEE
Confidence 4778888999999999999999876543221 1122 44444443 22 110 1247788
Q ss_pred EEeCCEEEEE
Q 028577 180 EMKNGVLKVT 189 (207)
Q Consensus 180 ~~~nGvL~I~ 189 (207)
+.++|.++|+
T Consensus 82 ~V~~g~VtLs 91 (132)
T 2kgs_A 82 KVERDTVTLT 91 (132)
T ss_dssp EEEETEEEEE
T ss_pred EEECCEEEEE
Confidence 8899977775
No 64
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=20.85 E-value=1.3e+02 Score=21.77 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=22.0
Q ss_pred EEEEEECCCCCCCCCceEEEEeCCEEEEEE
Q 028577 161 YTSRIDLPEKLYRTDQIKAEMKNGVLKVTV 190 (207)
Q Consensus 161 f~r~i~LP~~v~d~~~ikA~~~nGvL~I~l 190 (207)
..-+|.||.++ +.+.++..++..-|.|.+
T Consensus 16 V~i~I~lp~~~-~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 16 INIQFPVTGDA-DSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEECC----CCSCEEEEEETTEEEEEE
T ss_pred EEEEEECCCCC-CccceEEEEECCEEEEEE
Confidence 34468899888 899999999999999987
Done!